Query 004860
Match_columns 727
No_of_seqs 400 out of 3427
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 14:07:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004860.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004860hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03052 acetate--CoA ligase; 100.0 3E-102 6E-107 898.3 74.5 722 1-727 4-728 (728)
2 COG0365 Acs Acyl-coenzyme A sy 100.0 1.4E-86 2.9E-91 715.2 53.2 515 166-719 1-522 (528)
3 PRK12467 peptide synthase; Pro 100.0 8.1E-87 1.8E-91 883.6 36.8 650 12-718 1405-2084(3956)
4 PRK12467 peptide synthase; Pro 100.0 2.8E-85 6.1E-90 869.0 38.2 638 12-718 2929-3593(3956)
5 PTZ00237 acetyl-CoA synthetase 100.0 1.5E-81 3.2E-86 722.0 59.4 587 118-720 7-624 (647)
6 PLN02654 acetate-CoA ligase 100.0 4.5E-80 9.8E-85 712.0 61.7 582 119-720 30-641 (666)
7 PRK12316 peptide synthase; Pro 100.0 2.7E-83 5.9E-88 863.1 36.7 641 12-717 340-1004(5163)
8 PRK12316 peptide synthase; Pro 100.0 3E-83 6.5E-88 862.7 36.7 633 12-717 2889-3542(5163)
9 TIGR02316 propion_prpE propion 100.0 1.9E-79 4.1E-84 705.1 62.8 576 120-720 2-605 (628)
10 TIGR03443 alpha_am_amid L-amin 100.0 1.7E-82 3.7E-87 793.2 39.9 667 12-716 80-825 (1389)
11 PRK05691 peptide synthase; Val 100.0 1.1E-82 2.4E-87 851.9 39.8 642 12-716 3551-4225(4334)
12 PRK03584 acetoacetyl-CoA synth 100.0 6.5E-79 1.4E-83 704.6 64.1 606 84-720 4-626 (655)
13 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.9E-79 8.5E-84 703.5 61.0 579 119-720 5-603 (625)
14 TIGR01217 ac_ac_CoA_syn acetoa 100.0 9E-79 1.9E-83 700.2 63.7 606 83-720 4-627 (652)
15 PRK10252 entF enterobactin syn 100.0 4.5E-82 9.7E-87 786.9 38.4 638 12-716 295-964 (1296)
16 KOG1175 Acyl-CoA synthetase [L 100.0 1.1E-78 2.4E-83 653.3 51.5 588 114-720 6-603 (626)
17 PRK05691 peptide synthase; Val 100.0 2.2E-81 4.7E-86 839.4 35.2 650 12-717 2019-2695(4334)
18 PRK00174 acetyl-CoA synthetase 100.0 1.5E-77 3.4E-82 691.3 62.0 578 119-720 17-611 (637)
19 PRK10524 prpE propionyl-CoA sy 100.0 2.4E-77 5.1E-82 689.2 60.7 577 119-720 2-606 (629)
20 KOG1176 Acyl-CoA synthetase [L 100.0 9.9E-76 2.1E-80 634.9 49.1 497 188-721 28-534 (537)
21 KOG1177 Long chain fatty acid 100.0 2.8E-73 6E-78 570.6 39.9 504 186-723 60-591 (596)
22 PLN03051 acyl-activating enzym 100.0 2.8E-71 6E-76 620.6 51.8 488 240-727 1-499 (499)
23 COG0318 CaiC Acyl-CoA syntheta 100.0 1E-70 2.2E-75 618.0 49.8 491 186-719 21-527 (534)
24 PRK07788 acyl-CoA synthetase; 100.0 1.3E-70 2.8E-75 623.9 48.8 482 185-716 58-548 (549)
25 PRK04319 acetyl-CoA synthetase 100.0 9.7E-70 2.1E-74 618.9 54.4 512 166-719 35-559 (570)
26 PRK06060 acyl-CoA synthetase; 100.0 3.3E-69 7.1E-74 628.5 50.3 465 188-717 18-490 (705)
27 PRK07529 AMP-binding domain pr 100.0 1.2E-68 2.7E-73 614.9 53.2 517 178-720 29-571 (632)
28 PRK06334 long chain fatty acid 100.0 5.4E-69 1.2E-73 607.2 47.2 488 185-721 28-537 (539)
29 PLN02860 o-succinylbenzoate-Co 100.0 3.2E-68 7E-73 605.2 50.2 500 185-724 16-559 (563)
30 COG1021 EntE Peptide arylation 100.0 3.4E-68 7.3E-73 521.9 34.2 498 185-720 37-539 (542)
31 PRK13295 cyclohexanecarboxylat 100.0 2.4E-66 5.2E-71 588.3 54.3 497 187-720 35-545 (547)
32 PRK13382 acyl-CoA synthetase; 100.0 5.2E-67 1.1E-71 591.8 48.6 481 185-715 52-536 (537)
33 PLN02574 4-coumarate--CoA liga 100.0 9.6E-67 2.1E-71 592.7 50.1 492 187-722 50-557 (560)
34 PRK05677 long-chain-fatty-acid 100.0 1.7E-66 3.7E-71 591.2 50.9 497 186-722 34-560 (562)
35 PLN02736 long-chain acyl-CoA s 100.0 8E-67 1.7E-71 602.5 47.0 507 186-723 54-645 (651)
36 PLN02246 4-coumarate--CoA liga 100.0 4.4E-66 9.5E-71 585.1 51.6 487 187-719 34-536 (537)
37 PRK08314 long-chain-fatty-acid 100.0 8.8E-66 1.9E-70 584.5 49.7 495 186-720 20-543 (546)
38 PRK09274 peptide synthase; Pro 100.0 5.1E-66 1.1E-70 586.8 46.3 497 186-721 16-550 (552)
39 PRK07656 long-chain-fatty-acid 100.0 3.2E-65 6.9E-70 575.8 49.8 488 186-715 15-512 (513)
40 PLN02614 long-chain acyl-CoA s 100.0 6E-66 1.3E-70 593.5 44.4 502 186-723 55-653 (666)
41 PRK05857 acyl-CoA synthetase; 100.0 1.9E-65 4E-70 579.5 46.8 489 185-720 23-532 (540)
42 PRK07638 acyl-CoA synthetase; 100.0 3E-65 6.6E-70 571.5 46.4 467 186-720 11-482 (487)
43 PRK06839 acyl-CoA synthetase; 100.0 9.4E-65 2E-69 569.4 49.8 475 185-719 11-495 (496)
44 PRK05851 long-chain-fatty-acid 100.0 1.6E-65 3.4E-70 578.1 43.0 471 186-719 12-522 (525)
45 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.7E-64 3.6E-69 570.2 50.9 491 187-715 11-514 (515)
46 PRK05605 long-chain-fatty-acid 100.0 1.1E-64 2.4E-69 578.2 49.8 499 186-722 42-572 (573)
47 PRK07769 long-chain-fatty-acid 100.0 5.3E-65 1.1E-69 586.4 47.3 490 187-719 32-614 (631)
48 PRK08315 AMP-binding domain pr 100.0 1.7E-64 3.7E-69 575.6 50.6 507 186-724 26-556 (559)
49 PRK07008 long-chain-fatty-acid 100.0 2.4E-64 5.1E-69 570.7 51.1 494 187-720 21-534 (539)
50 PRK12583 acyl-CoA synthetase; 100.0 3.1E-64 6.7E-69 573.5 52.4 505 187-723 29-556 (558)
51 PRK05852 acyl-CoA synthetase; 100.0 1.9E-64 4.2E-69 571.3 49.1 508 166-719 8-532 (534)
52 PRK08279 long-chain-acyl-CoA s 100.0 1.2E-64 2.6E-69 580.6 47.7 498 186-720 47-565 (600)
53 PLN03102 acyl-activating enzym 100.0 2.4E-64 5.1E-69 574.3 49.6 499 187-721 25-556 (579)
54 PRK07470 acyl-CoA synthetase; 100.0 2.3E-64 5E-69 570.3 49.1 485 186-720 17-519 (528)
55 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 3.7E-64 8E-69 569.5 50.8 492 186-714 32-537 (538)
56 PRK12476 putative fatty-acid-- 100.0 1E-64 2.2E-69 581.6 46.1 489 187-719 45-606 (612)
57 PLN02330 4-coumarate--CoA liga 100.0 4E-64 8.8E-69 570.0 50.5 489 186-720 38-542 (546)
58 PRK06187 long-chain-fatty-acid 100.0 4.6E-64 1E-68 567.5 50.4 490 185-719 15-519 (521)
59 TIGR01734 D-ala-DACP-lig D-ala 100.0 3E-64 6.5E-69 566.1 48.5 479 186-718 10-501 (502)
60 PRK06145 acyl-CoA synthetase; 100.0 5.2E-64 1.1E-68 563.3 49.9 477 186-718 12-496 (497)
61 PRK08043 bifunctional acyl-[ac 100.0 1.2E-64 2.7E-69 590.3 45.6 488 186-719 214-713 (718)
62 PRK07868 acyl-CoA synthetase; 100.0 1E-64 2.2E-69 604.5 45.0 484 185-718 456-957 (994)
63 PRK06155 crotonobetaine/carnit 100.0 7.7E-64 1.7E-68 566.3 49.9 482 186-718 31-523 (542)
64 PRK08316 acyl-CoA synthetase; 100.0 7.9E-64 1.7E-68 565.8 49.4 494 186-722 21-522 (523)
65 PLN02861 long-chain-fatty-acid 100.0 1.9E-64 4.1E-69 581.6 44.8 504 186-723 53-650 (660)
66 PRK05620 long-chain-fatty-acid 100.0 9.8E-64 2.1E-68 570.3 49.8 508 187-719 21-557 (576)
67 PRK03640 O-succinylbenzoic aci 100.0 5.7E-64 1.2E-68 561.1 46.7 464 186-719 12-482 (483)
68 PRK07514 malonyl-CoA synthase; 100.0 1.9E-63 4.2E-68 559.8 51.0 481 188-721 14-503 (504)
69 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.2E-63 2.5E-68 564.0 49.0 484 186-714 33-527 (527)
70 PRK09088 acyl-CoA synthetase; 100.0 2.5E-63 5.3E-68 556.4 50.0 470 185-720 4-486 (488)
71 PRK06087 short chain acyl-CoA 100.0 2.5E-63 5.4E-68 564.1 50.4 497 187-724 34-541 (547)
72 PRK10946 entE enterobactin syn 100.0 3.8E-63 8.1E-68 560.5 51.4 486 190-722 37-535 (536)
73 PRK06018 putative acyl-CoA syn 100.0 5.3E-63 1.2E-67 560.3 51.4 495 186-719 20-534 (542)
74 PRK07786 long-chain-fatty-acid 100.0 2.7E-63 5.8E-68 562.8 48.7 499 173-722 17-527 (542)
75 PRK13390 acyl-CoA synthetase; 100.0 2.2E-63 4.7E-68 558.6 47.4 482 185-714 6-501 (501)
76 PRK12492 long-chain-fatty-acid 100.0 3.6E-63 7.9E-68 563.9 48.7 491 186-716 34-561 (562)
77 PRK08008 caiC putative crotono 100.0 4.5E-63 9.7E-68 558.4 49.0 488 186-714 17-517 (517)
78 PRK07798 acyl-CoA synthetase; 100.0 1.3E-62 2.8E-67 557.3 51.2 493 186-719 13-532 (533)
79 PRK13388 acyl-CoA synthetase; 100.0 1.4E-62 3.1E-67 555.6 50.1 474 188-720 13-507 (540)
80 PRK04813 D-alanine--poly(phosp 100.0 8.3E-63 1.8E-67 554.7 47.6 479 187-719 13-503 (503)
81 PRK08633 2-acyl-glycerophospho 100.0 2.7E-63 5.8E-68 612.4 46.0 497 186-720 625-1144(1146)
82 TIGR02262 benz_CoA_lig benzoat 100.0 2.1E-62 4.6E-67 551.5 48.9 496 173-716 3-508 (508)
83 PRK07867 acyl-CoA synthetase; 100.0 3.8E-62 8.3E-67 550.4 50.0 472 189-719 16-507 (529)
84 PRK07787 acyl-CoA synthetase; 100.0 2.2E-62 4.8E-67 545.6 46.3 452 186-715 10-469 (471)
85 PRK06188 acyl-CoA synthetase; 100.0 6.6E-62 1.4E-66 549.7 50.6 485 187-720 23-518 (524)
86 PRK08751 putative long-chain f 100.0 4.1E-62 9E-67 555.7 48.2 491 186-716 35-557 (560)
87 PRK07445 O-succinylbenzoic aci 100.0 2.5E-62 5.5E-67 539.4 44.6 429 209-723 19-451 (452)
88 PRK07059 Long-chain-fatty-acid 100.0 4.8E-62 1E-66 554.6 48.3 491 186-716 33-555 (557)
89 PRK06164 acyl-CoA synthetase; 100.0 7E-62 1.5E-66 551.6 49.2 498 186-724 20-537 (540)
90 PRK13383 acyl-CoA synthetase; 100.0 6.8E-62 1.5E-66 548.1 48.1 466 186-714 45-515 (516)
91 PRK06710 long-chain-fatty-acid 100.0 6.9E-62 1.5E-66 554.0 47.9 493 186-720 34-556 (563)
92 PTZ00342 acyl-CoA synthetase; 100.0 3.9E-62 8.5E-67 560.1 46.0 500 186-722 71-737 (746)
93 TIGR03205 pimA dicarboxylate-- 100.0 1.2E-61 2.6E-66 549.3 49.3 489 186-714 31-541 (541)
94 PLN02479 acetate-CoA ligase 100.0 2.9E-61 6.3E-66 548.6 50.5 504 186-727 30-567 (567)
95 PLN02387 long-chain-fatty-acid 100.0 3.2E-62 7E-67 565.3 42.9 511 186-723 68-693 (696)
96 PRK06178 acyl-CoA synthetase; 100.0 3.6E-61 7.8E-66 548.7 50.3 511 167-719 27-565 (567)
97 PTZ00216 acyl-CoA synthetase; 100.0 3.9E-62 8.5E-67 566.1 42.8 505 185-723 78-695 (700)
98 PRK13391 acyl-CoA synthetase; 100.0 9.6E-61 2.1E-65 538.3 50.2 493 186-719 7-509 (511)
99 PRK12406 long-chain-fatty-acid 100.0 2.3E-60 4.9E-65 535.2 53.0 487 193-721 3-505 (509)
100 PRK08974 long-chain-fatty-acid 100.0 1.2E-60 2.6E-65 543.5 51.2 496 187-723 34-559 (560)
101 PRK08180 feruloyl-CoA synthase 100.0 2.6E-61 5.6E-66 553.3 43.3 492 186-723 49-600 (614)
102 PLN02430 long-chain-fatty-acid 100.0 7.7E-61 1.7E-65 550.5 44.7 506 186-723 52-650 (660)
103 PRK08276 long-chain-fatty-acid 100.0 3.2E-60 6.9E-65 533.2 48.6 479 209-723 11-500 (502)
104 PRK09029 O-succinylbenzoic aci 100.0 1.3E-60 2.8E-65 529.7 44.4 439 186-723 13-457 (458)
105 PRK08162 acyl-CoA synthetase; 100.0 1.2E-59 2.6E-64 534.0 52.1 497 187-724 29-544 (545)
106 PRK06814 acylglycerophosphoeth 100.0 6.7E-60 1.5E-64 579.9 49.1 486 187-724 642-1137(1140)
107 PRK08308 acyl-CoA synthetase; 100.0 1.1E-59 2.4E-64 514.8 45.5 406 194-714 1-408 (414)
108 COG1020 EntF Non-ribosomal pep 100.0 4.3E-61 9.3E-66 556.0 29.5 553 12-636 66-642 (642)
109 PRK12582 acyl-CoA synthetase; 100.0 2.7E-59 5.8E-64 537.6 41.1 495 186-723 59-611 (624)
110 PRK09192 acyl-CoA synthetase; 100.0 1.7E-58 3.6E-63 527.3 45.5 464 207-720 47-567 (579)
111 PRK05850 acyl-CoA synthetase; 100.0 3.7E-58 8E-63 525.1 45.9 491 186-720 11-569 (578)
112 TIGR01923 menE O-succinylbenzo 100.0 5.8E-58 1.3E-62 505.7 42.9 430 211-713 1-436 (436)
113 COG1022 FAA1 Long-chain acyl-C 100.0 4E-57 8.6E-62 493.3 39.3 486 185-723 25-605 (613)
114 PRK07768 long-chain-fatty-acid 100.0 3E-56 6.4E-61 505.9 45.0 473 187-718 13-544 (545)
115 KOG1256 Long-chain acyl-CoA sy 100.0 9.2E-55 2E-59 466.2 44.1 504 186-723 85-684 (691)
116 KOG1180 Acyl-CoA synthetase [L 100.0 1.4E-52 3E-57 428.4 31.4 492 205-723 85-673 (678)
117 KOG1179 Very long-chain acyl-C 100.0 6.4E-52 1.4E-56 425.7 34.5 495 185-716 86-610 (649)
118 PF00501 AMP-binding: AMP-bind 100.0 4.7E-53 1E-57 463.7 26.2 390 185-618 4-417 (417)
119 TIGR01733 AA-adenyl-dom amino 100.0 5.1E-51 1.1E-55 446.2 38.0 393 211-643 1-408 (408)
120 PRK07824 O-succinylbenzoic aci 100.0 1.5E-46 3.3E-51 402.9 34.5 316 354-719 33-357 (358)
121 PTZ00297 pantothenate kinase; 100.0 2.3E-44 4.9E-49 428.3 39.2 473 186-723 437-999 (1452)
122 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.3E-41 5E-46 360.8 29.8 289 356-709 95-386 (386)
123 KOG1178 Non-ribosomal peptide 100.0 7.3E-39 1.6E-43 361.6 23.8 489 188-716 48-576 (1032)
124 TIGR02155 PA_CoA_ligase phenyl 100.0 1.9E-36 4.2E-41 331.3 29.6 326 354-711 73-418 (422)
125 TIGR03335 F390_ftsA coenzyme F 100.0 6.4E-29 1.4E-33 272.0 28.7 328 353-710 83-440 (445)
126 KOG3628 Predicted AMP-binding 100.0 7.3E-26 1.6E-30 247.7 36.2 508 185-722 779-1355(1363)
127 TIGR03089 conserved hypothetic 99.9 2.9E-24 6.4E-29 212.3 23.4 217 186-447 6-227 (227)
128 COG1541 PaaK Coenzyme F390 syn 99.9 5E-23 1.1E-27 213.5 28.5 324 352-709 86-429 (438)
129 PRK09188 serine/threonine prot 99.9 2.4E-21 5.2E-26 202.2 14.8 118 589-721 209-330 (365)
130 TIGR02304 aden_form_hyp probab 99.7 4E-16 8.7E-21 167.0 25.6 258 358-663 101-378 (430)
131 KOG3628 Predicted AMP-binding 99.6 3.3E-13 7.1E-18 149.6 24.8 485 187-719 105-704 (1363)
132 PF13193 AMP-binding_C: AMP-bi 99.4 1.1E-12 2.4E-17 104.6 7.0 70 626-707 1-73 (73)
133 PF13745 HxxPF_rpt: HxxPF-repe 99.0 3.7E-12 8E-17 106.9 -5.4 84 41-132 1-91 (91)
134 PF04443 LuxE: Acyl-protein sy 98.9 4.9E-08 1.1E-12 102.6 17.8 236 353-622 86-358 (365)
135 PF03321 GH3: GH3 auxin-respon 98.4 5.3E-06 1.1E-10 92.5 15.1 74 591-665 371-452 (528)
136 PLN02249 indole-3-acetic acid- 97.8 0.0011 2.5E-08 74.2 19.3 44 590-633 409-456 (597)
137 PLN02620 indole-3-acetic acid- 97.7 0.0052 1.1E-07 68.3 21.2 44 590-633 422-469 (612)
138 PF14535 AMP-binding_C_2: AMP- 97.6 0.00025 5.5E-09 59.5 7.9 86 619-710 1-91 (96)
139 PLN02247 indole-3-acetic acid- 97.5 0.017 3.6E-07 64.5 22.5 43 590-632 416-462 (606)
140 COG1541 PaaK Coenzyme F390 syn 90.7 1 2.3E-05 48.2 8.5 82 208-290 108-192 (438)
141 PF00501 AMP-binding: AMP-bind 74.9 15 0.00033 39.7 9.5 89 354-451 8-99 (417)
142 PLN02736 long-chain acyl-CoA s 74.0 37 0.00079 39.5 12.9 119 354-479 57-180 (651)
143 TIGR03089 conserved hypothetic 71.1 18 0.00039 35.7 8.0 77 188-281 147-226 (227)
144 TIGR03335 F390_ftsA coenzyme F 69.6 24 0.00053 38.8 9.5 94 191-288 86-184 (445)
145 TIGR02155 PA_CoA_ligase phenyl 66.3 28 0.00062 37.9 9.2 80 209-289 94-176 (422)
146 PRK09274 peptide synthase; Pro 65.2 29 0.00064 39.3 9.5 99 354-453 19-121 (552)
147 PRK07656 long-chain-fatty-acid 63.6 52 0.0011 36.7 11.0 97 354-460 18-117 (513)
148 PLN03052 acetate--CoA ligase; 63.1 46 0.001 39.3 10.7 99 354-454 188-289 (728)
149 PRK13295 cyclohexanecarboxylat 61.6 39 0.00085 38.2 9.6 97 354-454 37-136 (547)
150 PRK00174 acetyl-CoA synthetase 61.2 48 0.001 38.5 10.3 97 354-454 80-179 (637)
151 PRK04319 acetyl-CoA synthetase 60.4 64 0.0014 36.7 11.1 99 355-459 58-159 (570)
152 TIGR02188 Ac_CoA_lig_AcsA acet 60.4 49 0.0011 38.2 10.3 97 354-454 70-169 (625)
153 PF09580 Spore_YhcN_YlaJ: Spor 60.3 38 0.00082 31.8 7.7 56 624-687 77-132 (177)
154 PTZ00237 acetyl-CoA synthetase 59.7 59 0.0013 37.8 10.8 95 355-453 75-172 (647)
155 PLN02246 4-coumarate--CoA liga 59.5 50 0.0011 37.3 9.9 98 354-459 36-136 (537)
156 PRK06187 long-chain-fatty-acid 59.0 55 0.0012 36.5 10.2 84 376-460 32-118 (521)
157 PLN02654 acetate-CoA ligase 58.8 59 0.0013 38.0 10.5 97 354-454 102-201 (666)
158 PRK03584 acetoacetyl-CoA synth 58.7 61 0.0013 37.7 10.7 96 354-454 97-195 (655)
159 PRK10524 prpE propionyl-CoA sy 58.6 56 0.0012 37.8 10.3 96 354-453 66-164 (629)
160 PRK08008 caiC putative crotono 58.1 57 0.0012 36.5 10.0 101 354-459 20-123 (517)
161 PRK07514 malonyl-CoA synthase; 58.1 60 0.0013 36.1 10.2 86 373-459 26-114 (504)
162 PRK06334 long chain fatty acid 57.7 56 0.0012 36.9 9.9 84 375-459 45-128 (539)
163 PRK05857 acyl-CoA synthetase; 57.2 47 0.001 37.6 9.2 94 354-455 27-123 (540)
164 PLN02387 long-chain-fatty-acid 57.2 62 0.0013 38.0 10.4 102 374-480 105-209 (696)
165 PRK07798 acyl-CoA synthetase; 56.8 72 0.0016 35.7 10.7 86 374-460 27-115 (533)
166 PRK06839 acyl-CoA synthetase; 56.3 69 0.0015 35.5 10.3 96 354-459 15-114 (496)
167 PLN03102 acyl-activating enzym 56.3 55 0.0012 37.4 9.6 94 354-457 27-123 (579)
168 PTZ00342 acyl-CoA synthetase; 54.4 1.3E+02 0.0028 35.7 12.3 118 354-480 74-208 (746)
169 PRK08316 acyl-CoA synthetase; 54.2 70 0.0015 35.7 10.0 86 374-460 35-123 (523)
170 KOG1177 Long chain fatty acid 54.1 51 0.0011 35.8 7.8 108 373-481 75-199 (596)
171 PLN02574 4-coumarate--CoA liga 53.6 72 0.0016 36.2 10.0 99 354-460 52-154 (560)
172 PRK07788 acyl-CoA synthetase; 52.9 55 0.0012 37.1 8.9 84 375-459 74-160 (549)
173 TIGR03443 alpha_am_amid L-amin 52.8 53 0.0012 42.2 9.6 99 354-453 249-350 (1389)
174 PRK07529 AMP-binding domain pr 52.8 72 0.0016 36.9 9.9 96 354-452 38-136 (632)
175 PRK13388 acyl-CoA synthetase; 52.8 92 0.002 35.2 10.6 84 375-459 26-113 (540)
176 PRK08279 long-chain-acyl-CoA s 52.5 81 0.0018 36.2 10.3 96 354-459 50-148 (600)
177 TIGR01217 ac_ac_CoA_syn acetoa 52.0 86 0.0019 36.5 10.4 93 356-453 99-194 (652)
178 TIGR02316 propion_prpE propion 51.6 53 0.0011 38.0 8.6 96 354-453 65-163 (628)
179 PRK08315 AMP-binding domain pr 51.2 75 0.0016 36.0 9.7 93 354-454 29-124 (559)
180 PRK13391 acyl-CoA synthetase; 49.5 96 0.0021 34.6 10.1 97 354-458 10-109 (511)
181 KOG1176 Acyl-CoA synthetase [L 49.2 65 0.0014 36.3 8.3 87 373-460 43-134 (537)
182 PRK08276 long-chain-fatty-acid 49.1 67 0.0014 35.8 8.7 84 375-459 11-97 (502)
183 PRK13383 acyl-CoA synthetase; 48.7 65 0.0014 36.1 8.5 84 375-459 60-146 (516)
184 TIGR02898 spore_YhcN_YlaJ spor 47.7 81 0.0018 29.0 7.2 57 625-688 57-114 (158)
185 PRK05677 long-chain-fatty-acid 47.7 85 0.0018 35.6 9.4 94 354-457 37-134 (562)
186 PRK08314 long-chain-fatty-acid 47.1 93 0.002 35.1 9.6 85 375-460 35-123 (546)
187 PLN02330 4-coumarate--CoA liga 47.1 73 0.0016 36.0 8.7 96 354-457 41-139 (546)
188 TIGR03208 cyc_hxne_CoA_lg cycl 47.0 94 0.002 35.0 9.6 97 354-454 35-134 (538)
189 PLN02614 long-chain acyl-CoA s 47.0 1.3E+02 0.0028 35.2 10.8 87 374-461 78-167 (666)
190 PRK08751 putative long-chain f 46.9 91 0.002 35.3 9.5 95 354-458 38-136 (560)
191 PRK06155 crotonobetaine/carnit 46.8 87 0.0019 35.4 9.2 85 375-460 46-133 (542)
192 PRK07059 Long-chain-fatty-acid 46.7 97 0.0021 35.1 9.6 95 354-458 36-133 (557)
193 PRK12583 acyl-CoA synthetase; 46.1 1E+02 0.0022 34.8 9.8 93 354-454 31-126 (558)
194 TIGR01733 AA-adenyl-dom amino 46.1 64 0.0014 34.6 7.7 67 392-459 20-86 (408)
195 PRK09088 acyl-CoA synthetase; 45.6 1.2E+02 0.0025 33.6 9.9 92 354-453 8-102 (488)
196 PRK06087 short chain acyl-CoA 45.3 83 0.0018 35.5 8.8 90 354-452 36-128 (547)
197 PRK06164 acyl-CoA synthetase; 44.4 84 0.0018 35.4 8.6 91 354-454 23-116 (540)
198 COG0318 CaiC Acyl-CoA syntheta 44.3 1.6E+02 0.0035 33.2 10.8 93 354-454 24-119 (534)
199 PRK13390 acyl-CoA synthetase; 43.9 1.4E+02 0.0031 33.2 10.3 93 354-454 10-105 (501)
200 PLN02430 long-chain-fatty-acid 43.6 1.3E+02 0.0029 35.0 10.2 104 354-460 55-163 (660)
201 TIGR03098 ligase_PEP_1 acyl-Co 43.6 76 0.0017 35.4 8.1 84 375-459 25-111 (515)
202 PRK05934 type III secretion sy 41.7 1.2E+02 0.0027 30.9 7.9 72 625-699 74-148 (341)
203 PLN02861 long-chain-fatty-acid 41.3 1E+02 0.0022 35.9 8.9 86 374-460 76-164 (660)
204 PRK05605 long-chain-fatty-acid 41.3 1E+02 0.0022 35.1 8.8 84 375-459 57-143 (573)
205 PRK03640 O-succinylbenzoic aci 41.2 1.8E+02 0.0039 32.0 10.6 94 354-457 15-111 (483)
206 PRK06018 putative acyl-CoA syn 40.6 1.4E+02 0.0031 33.6 9.8 84 374-458 38-124 (542)
207 PRK05620 long-chain-fatty-acid 40.1 1.6E+02 0.0036 33.4 10.2 99 354-459 23-125 (576)
208 PRK12492 long-chain-fatty-acid 39.9 95 0.0021 35.3 8.2 81 374-455 48-132 (562)
209 PLN02479 acetate-CoA ligase 39.3 1.2E+02 0.0025 34.6 8.8 93 354-456 33-128 (567)
210 PRK05850 acyl-CoA synthetase; 38.9 2.6E+02 0.0056 31.8 11.6 102 354-459 14-123 (578)
211 COG0031 CysK Cysteine synthase 38.6 1.2E+02 0.0025 31.3 7.4 58 230-288 59-116 (300)
212 PLN02860 o-succinylbenzoate-Co 38.0 84 0.0018 35.7 7.3 79 375-454 32-113 (563)
213 PRK08162 acyl-CoA synthetase; 37.7 1E+02 0.0022 34.8 8.0 84 375-459 43-129 (545)
214 PRK13382 acyl-CoA synthetase; 37.5 1.4E+02 0.0031 33.6 9.1 94 354-457 56-152 (537)
215 PRK12476 putative fatty-acid-- 37.3 2.8E+02 0.006 31.9 11.5 101 354-458 47-155 (612)
216 PRK07470 acyl-CoA synthetase; 36.9 1.2E+02 0.0027 33.9 8.5 81 375-456 32-115 (528)
217 PRK12406 long-chain-fatty-acid 35.8 1.1E+02 0.0024 34.1 7.8 84 375-459 11-97 (509)
218 TIGR01923 menE O-succinylbenzo 35.8 1.1E+02 0.0023 33.2 7.5 68 386-454 13-80 (436)
219 PRK08180 feruloyl-CoA synthase 34.9 1.8E+02 0.0039 33.4 9.5 95 354-453 52-154 (614)
220 PRK06178 acyl-CoA synthetase; 33.5 1.6E+02 0.0035 33.3 8.8 85 375-460 58-145 (567)
221 TIGR02262 benz_CoA_lig benzoat 31.3 1.8E+02 0.0039 32.3 8.6 84 375-459 30-116 (508)
222 PLN03051 acyl-activating enzym 30.6 3.3E+02 0.0071 30.3 10.5 97 189-289 117-217 (499)
223 PRK08974 long-chain-fatty-acid 30.1 1.8E+02 0.0038 33.0 8.3 80 375-455 48-131 (560)
224 PRK10696 tRNA 2-thiocytidine b 29.8 4.3E+02 0.0094 26.5 10.1 77 211-287 4-94 (258)
225 PTZ00216 acyl-CoA synthetase; 29.2 1.9E+02 0.0041 34.0 8.5 88 372-460 118-208 (700)
226 PRK09162 hypoxanthine-guanine 28.6 1.4E+02 0.0031 28.1 6.0 45 209-253 16-60 (181)
227 PRK05852 acyl-CoA synthetase; 28.4 1.8E+02 0.0039 32.7 7.9 90 354-451 29-121 (534)
228 PRK07867 acyl-CoA synthetase; 28.4 2.2E+02 0.0047 32.1 8.5 83 375-458 28-114 (529)
229 PRK06060 acyl-CoA synthetase; 28.4 1.8E+02 0.0038 34.3 8.1 92 354-456 19-113 (705)
230 COG4009 Uncharacterized protei 27.6 1.6E+02 0.0035 23.2 4.8 65 209-284 9-77 (88)
231 PRK07008 long-chain-fatty-acid 27.6 1.8E+02 0.004 32.7 7.8 82 375-457 39-123 (539)
232 PRK06188 acyl-CoA synthetase; 27.6 1.7E+02 0.0038 32.6 7.6 80 374-454 36-118 (524)
233 PRK07769 long-chain-fatty-acid 26.7 5.9E+02 0.013 29.3 12.0 101 354-458 34-142 (631)
234 TIGR01734 D-ala-DACP-lig D-ala 26.6 1.5E+02 0.0033 32.8 6.9 79 375-454 25-106 (502)
235 PF01041 DegT_DnrJ_EryC1: DegT 26.6 1.5E+02 0.0033 31.4 6.6 64 221-287 52-121 (363)
236 PRK08308 acyl-CoA synthetase; 26.4 6E+02 0.013 27.2 11.3 96 189-289 99-199 (414)
237 TIGR03205 pimA dicarboxylate-- 26.1 1.9E+02 0.0042 32.5 7.7 78 375-453 46-126 (541)
238 PRK08633 2-acyl-glycerophospho 25.8 2.9E+02 0.0063 34.6 9.8 99 353-460 627-727 (1146)
239 PRK08043 bifunctional acyl-[ac 24.5 6.6E+02 0.014 29.5 12.0 97 188-288 362-463 (718)
240 PRK12582 acyl-CoA synthetase; 24.3 2.1E+02 0.0045 33.0 7.6 96 354-453 62-165 (624)
241 PRK06710 long-chain-fatty-acid 24.2 2E+02 0.0043 32.6 7.4 81 375-456 49-132 (563)
242 PRK07786 long-chain-fatty-acid 24.2 2.6E+02 0.0055 31.5 8.2 82 375-457 42-126 (542)
243 PRK13237 tyrosine phenol-lyase 24.1 3.5E+02 0.0075 29.8 8.5 46 230-280 114-174 (460)
244 TIGR02275 DHB_AMP_lig 2,3-dihy 23.8 1.9E+02 0.0041 32.4 7.0 79 375-454 48-129 (527)
245 PRK04813 D-alanine--poly(phosp 23.6 2.2E+02 0.0049 31.4 7.5 78 375-453 27-107 (503)
246 PF01037 AsnC_trans_reg: AsnC 23.3 2.7E+02 0.0059 21.1 5.8 55 622-689 10-64 (74)
247 PRK09029 O-succinylbenzoic aci 23.1 2.6E+02 0.0057 30.5 7.9 78 375-453 28-108 (458)
248 PF01514 YscJ_FliF: Secretory 22.8 3E+02 0.0064 26.6 7.1 79 616-698 109-193 (206)
249 TIGR02379 ECA_wecE TDP-4-keto- 22.7 2.3E+02 0.0049 30.4 7.0 62 222-287 59-126 (376)
250 PF09664 DUF2399: Protein of u 22.6 5.9E+02 0.013 23.2 10.6 112 373-494 21-135 (152)
251 TIGR02080 O_succ_thio_ly O-suc 21.6 5.7E+02 0.012 27.4 9.7 58 230-288 87-144 (382)
252 PRK11706 TDP-4-oxo-6-deoxy-D-g 21.6 2.6E+02 0.0056 29.8 7.1 59 225-287 62-126 (375)
253 PF00455 DeoRC: DeoR C termina 21.1 2.6E+02 0.0056 25.7 6.1 83 419-509 16-106 (161)
254 PF06277 EutA: Ethanolamine ut 21.1 3.9E+02 0.0085 29.4 8.0 56 187-249 369-424 (473)
255 PRK09192 acyl-CoA synthetase; 21.0 3.8E+02 0.0082 30.5 8.8 85 374-459 48-142 (579)
256 COG0365 Acs Acyl-coenzyme A sy 21.0 4E+02 0.0087 30.0 8.5 94 359-457 27-124 (528)
257 COG0399 WecE Predicted pyridox 20.4 2.2E+02 0.0047 30.4 6.0 64 220-287 60-129 (374)
258 PLN02556 cysteine synthase/L-3 20.4 5.6E+02 0.012 27.4 9.2 67 222-288 98-165 (368)
259 PHA02553 6 baseplate wedge sub 20.3 2.7E+02 0.0059 31.7 6.9 73 610-683 303-376 (611)
260 PLN02565 cysteine synthase 20.2 6.5E+02 0.014 26.2 9.5 59 230-288 63-121 (322)
261 PRK08574 cystathionine gamma-s 20.1 5.5E+02 0.012 27.5 9.2 57 230-288 89-145 (385)
262 PRK07638 acyl-CoA synthetase; 20.1 7.8E+02 0.017 27.0 11.0 95 191-290 143-241 (487)
No 1
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=2.7e-102 Score=898.31 Aligned_cols=722 Identities=63% Similarity=1.067 Sum_probs=618.4
Q ss_pred CCCcccccChhHHHHcCCCchhhHHHHHHHHHHHHhhcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCC
Q 004860 1 MGKNIREVGVEDLMKVGLKLEEAEEFDKILKQVISCSKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIK 80 (727)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~ 80 (727)
|||.+++|+++||.++|+..+++++|.+.|+++..+.+ -+-..++-.. ..+.|+|..+.++||+|++.++-++.....
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (728)
T PLN03052 4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAG-ASPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL 81 (728)
T ss_pred ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhc-CCchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence 79999999999999999999999999999999996644 2556677777 789999999999999999999999998887
Q ss_pred CCCccccCChhhhcccchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCC
Q 004860 81 GPPLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDK 160 (727)
Q Consensus 81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~ 160 (727)
.+..+|.|.+....++++..+++..+.......|...+.+|+.|++++++++..||..+++.+.+.|++++.++++..+.
T Consensus 82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~ 161 (728)
T PLN03052 82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE 161 (728)
T ss_pred CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence 78889999998888899998888865444334477777899999999999999999999999988999999999875333
Q ss_pred CCCCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 004860 161 SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (727)
Q Consensus 161 ~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~ 239 (727)
..+..+||.++..|++++|++++. +++||++|+++.+++...+..+++||+||+++++++|+.|+++ +++||+|+++
T Consensus 162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~ 239 (728)
T PLN03052 162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239 (728)
T ss_pred CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 446679999999999999998765 4689999999987532233457899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCC
Q 004860 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (727)
Q Consensus 240 ~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 319 (727)
++|++++++++|||+++|++++|++|+++++++.+++++++++++|+++...++++.++....+.+.....++++.....
T Consensus 240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~ 319 (728)
T PLN03052 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK 319 (728)
T ss_pred eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence 99999999999999999999999999999999999999999999999998888888888877777666556666654322
Q ss_pred CCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCE
Q 004860 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (727)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~ 399 (727)
...........+|++++.................++++++||+|||||||+||||+++|++++..+......++++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~ 399 (728)
T PLN03052 320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI 399 (728)
T ss_pred ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence 11111122356788876543210001112222345699999999999999999999999998887766666788999999
Q ss_pred EEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEee
Q 004860 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (727)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~g 479 (727)
++++++++|+++.+.++++|++|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus 400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~ 479 (728)
T PLN03052 400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479 (728)
T ss_pred EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence 99999999999998889999999999999987777889999999999999999999999988755566789999999999
Q ss_pred cCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe
Q 004860 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (727)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~ 559 (727)
||+++++...|+...++..+++|.||+||++++++...+..+...+++|+|++|++++|+|++|+++|.|++++|||++.
T Consensus 480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~ 559 (728)
T PLN03052 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF 559 (728)
T ss_pred CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence 99999998888877665567999999999987665554444556678999999999999999999999997657999998
Q ss_pred cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCce
Q 004860 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (727)
Q Consensus 560 ~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (727)
+.+++....+++++.++.||..+|..+|++||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|+..||+|.
T Consensus 560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~ 639 (728)
T PLN03052 560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVL 639 (728)
T ss_pred CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcc
Confidence 88777766677777778899888888888999999999999999999999999999999999999999999854799999
Q ss_pred eeEEEeecCCCCCceEEEEEEEec--CCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHH
Q 004860 640 ETAAISVSPAGGGPEVLVIFVVLK--KGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 717 (727)
Q Consensus 640 ~a~vv~~~~~~~~~~~l~a~vv~~--~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~ 717 (727)
+++|++++++..|++++++||+++ ++...+.++|+++|+++|+++|+++++|+.|+++++||+|+||||+|+.|++++
T Consensus 640 eaaVvg~~d~~~g~e~~~afVvl~~~~g~~~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~ 719 (728)
T PLN03052 640 ETAAIGVPPPGGGPEQLVIAAVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQL 719 (728)
T ss_pred eEEEEeeecCCCCcEEEEEEEEEecCCCCCCCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHHH
Confidence 999999998866558999999998 566667789999999999999999999999999999999999999999999998
Q ss_pred hhhhcccCCC
Q 004860 718 KHELSVRSRI 727 (727)
Q Consensus 718 ~~~~~~~~~~ 727 (727)
.+... +|+|
T Consensus 720 ~~~~~-~~~~ 728 (728)
T PLN03052 720 AQELS-RSKL 728 (728)
T ss_pred Hhhhh-ccCC
Confidence 77765 7765
No 2
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=1.4e-86 Score=715.24 Aligned_cols=515 Identities=27% Similarity=0.421 Sum_probs=446.6
Q ss_pred CcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCC
Q 004860 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMT 243 (727)
Q Consensus 166 ~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~Vai~~~~s 243 (727)
+||.++..|.+++|++++... ..+|++|+++.++.+ +. +++||+||.+.++++|+.|++. + +||||+|++|+.
T Consensus 1 ~wf~~~~lN~~~n~~dr~~~~-~~~~~~aii~~~e~~--~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~ 75 (528)
T COG0365 1 KWFEGGTLNLALNALDRHLEA-DRPDDTAIIFDGEDG--LF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNS 75 (528)
T ss_pred CCcCCceeechhhhhhhhhhc-cCCCceEEEEEcCCC--Cc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCC
Confidence 599999999999999997632 348999999987621 22 7999999999999999999975 7 999999999999
Q ss_pred HHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCC
Q 004860 244 VRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGI 323 (727)
Q Consensus 244 ~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 323 (727)
++.+++||||+|+||+++|+.+.++++.+++++++++++++|+.++..++++..+....+.+.... ++++....
T Consensus 76 pe~~~a~LA~~riGAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~-~iv~~r~~----- 149 (528)
T COG0365 76 PEAVIALLATARIGAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSS-VVVVPRLG----- 149 (528)
T ss_pred HHHHHHHHHHHHcCCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcc-eEEecccc-----
Confidence 999999999999999999999999999999999999999999999999999998888777766655 44443322
Q ss_pred CCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH-hhchhcCCCCCCEEEE
Q 004860 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCW 402 (727)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~ 402 (727)
.+|.+.....+. ..+.....++|+++|+|||||||+||||+|+|++++.... .....+.+.++|++++
T Consensus 150 ------~~~~~~~~~~~~-----~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~ 218 (528)
T COG0365 150 ------LWYDEAVEKASE-----KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWN 218 (528)
T ss_pred ------ccHHHHhhccCC-----CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEe
Confidence 677777765443 2333447889999999999999999999999998655444 4445788889999999
Q ss_pred ecccccccchHH-hHHhhhcCcEEEEecCCCC--hhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEee
Q 004860 403 PTNLGWVMGPVI-LFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (727)
Q Consensus 403 ~~~~~~~~~~~~-~~~~l~~G~~lv~~~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~g 479 (727)
.++++|.++.+. +|++|++|++++++++.++ +..++++|+++++|++++.|+.+++|.+.......++++||.+.++
T Consensus 219 ~ad~GW~~g~~~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~Sa 298 (528)
T COG0365 219 SSDPGWIYGLWYSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSA 298 (528)
T ss_pred CCCchhhhCchHHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeecc
Confidence 999999999965 8999999999999988765 7899999999999999999999999999876677899999999999
Q ss_pred cCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe
Q 004860 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (727)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~ 559 (727)
||+|+++.++|+.+.++ ++|.+.||+||++.++....+ +...++.|+|+||+++.|+|++|+++|+|+ |+|++.
T Consensus 299 GEPLnpe~~~w~~~~~g-~~i~d~~gqTEtg~~~~~~~~--~~~~g~~g~p~pG~~~~vvdd~g~~~~~~~---G~Lvi~ 372 (528)
T COG0365 299 GEPLNPEAFEWFYSALG-VWILDIYGQTETGMGFIAGRP--PVKNGSSGLPLPGYAVRRVDDEGNPVPPGV---GELVVR 372 (528)
T ss_pred CCCCCHHHHHHHHHHhC-CCEeccccccccCccccCCCC--CcCCCCCCCCCCCceeEEECCCCCcCCCCc---eEEEEe
Confidence 99999999999998874 999999999999976666555 445555699999999999999999999997 899995
Q ss_pred cccCCCCcccccc-ccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCc
Q 004860 560 PLYLGASDRLLNA-DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (727)
Q Consensus 560 ~~y~~~~~~~~~~-~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V 638 (727)
....+....++++ +.+.+.|. +. ||.|||.+++|+||+++|+||.||+||+.|+||.+.|||++|. +||.|
T Consensus 373 ~~~p~~~~~~w~d~er~~~~y~------~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~-~hP~V 444 (528)
T COG0365 373 LPWPGMALTYWNDPERYKEAYF------GR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLL-AHPAV 444 (528)
T ss_pred CCCchhhhhhhCCHHHHHHHHh------hc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHH-hCcce
Confidence 3332333333333 23322222 11 8999999999999999999999999999999999999999997 99999
Q ss_pred eeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHh
Q 004860 639 LETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 639 ~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 718 (727)
.||+||+.+|+..| +.++|||++++|..++ +|.+.|++++++.+.++++|+.|+++++||+|.||||.|+.|++.+.
T Consensus 445 aEaAvVg~pd~~kg-~~v~afVvL~~g~~~~--~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI~R~~lr~~~~ 521 (528)
T COG0365 445 AEAAVVGVPDPGKG-QIVLAFVVLAAGVEPN--ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKIQRRLLRKILH 521 (528)
T ss_pred eeeEEEeccCCCCC-cEEEEEEEecCCCChH--HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccHHHHHHHHHHh
Confidence 99999999999999 8999999999998777 99999999999999999999999999999999999999999999987
Q ss_pred h
Q 004860 719 H 719 (727)
Q Consensus 719 ~ 719 (727)
+
T Consensus 522 ~ 522 (528)
T COG0365 522 K 522 (528)
T ss_pred h
Confidence 4
No 3
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=8.1e-87 Score=883.62 Aligned_cols=650 Identities=19% Similarity=0.199 Sum_probs=531.7
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC-----Ccc
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PLY 85 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~-----~~~ 85 (727)
|++-+++......+|.+.++++.++ +++++||++||++ |++.|+++|..+.+|+ ||+||++++..... ...
T Consensus 1405 NtlplR~~~~~~~t~~~~l~~v~~~~~~a~~hq~~p~~~-i~~~l~~~r~~~~~pL--Fq~~~~~~~~~~~~~~~~~~~~ 1481 (3956)
T PRK12467 1405 NTQVLRAEVDGQASFQQLLQQVKQAALEAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMFNHQRDDHQAQAQLPGLS 1481 (3956)
T ss_pred eeeEEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHHhcccccCCCCCc--eeEEEEeecccccccccCCCce
Confidence 4556777777788888888888888 9999999999999 9999999998888888 99999998743221 111
Q ss_pred c--cCChhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCCCC
Q 004860 86 W--FPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDK 160 (727)
Q Consensus 86 ~--~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~ 160 (727)
. .......++|||++.+.+.++++...+ |++ ++|++.++++|.++|.++|+++..+++.+...+ ++..+.
T Consensus 1482 ~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~l~~~~~~~~ 1556 (3956)
T PRK12467 1482 VESLSWESQTAQFDLTLDTYESSEGLQASLTYAT-----DLFEASTIERLAGHWLNLLQGLVADPERRLGELDLLDEAER 1556 (3956)
T ss_pred eEeeecCCcccccceEEEEEecCCeEEEEEEEeC-----CcCCHHHHHHHHHHHHHHHHHHhhCccCceeeccccchHHh
Confidence 1 111234678999998888777888888 999 999999999999999999999998888877764 555544
Q ss_pred CCCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 004860 161 SKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (727)
Q Consensus 161 ~~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Va 237 (727)
...+..|+.+........+++. ..+++++||++|+++.++ .+||+||+++++++|++|.++ +++|++|+
T Consensus 1557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~ 1628 (3956)
T PRK12467 1557 RQILEGWNATHTGYPLARLVHQLIEDQAAATPEAVALVFGEQ--------ELTYGELNRRANRLAHRLIALGVGPEVLVG 1628 (3956)
T ss_pred hhhHHhhcCCccCCCccccHHHHHHHHHHhCCCCeEEEeCCc--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 4555668766544333334443 335689999999999877 999999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCC
Q 004860 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (727)
Q Consensus 238 i~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 317 (727)
|+++||+++++++|||+|+|++|+||||.+|.+++.+++++++++++|++....... ........+++...
T Consensus 1629 l~~~~s~~~vv~~lavlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~ 1699 (3956)
T PRK12467 1629 IAVERSLEMVVGLLAILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARL---------PLPDGLRSLVLDQE 1699 (3956)
T ss_pred EEccCCHHHHHHHHHhhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhC---------ccccCCcEEEeccc
Confidence 999999999999999999999999999999999999999999999999987532111 00001112222110
Q ss_pred CCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCC
Q 004860 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (727)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~ 397 (727)
.++..... ...+.....++++|||+|||||||+||||+++|+++++.+.+....++++++
T Consensus 1700 ---------------~~~~~~~~-----~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~~~~~~ 1759 (3956)
T PRK12467 1700 ---------------DDWLEGYS-----DSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAYQLSAA 1759 (3956)
T ss_pred ---------------cchhccCC-----CCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhcCCCcc
Confidence 00001110 1112234467999999999999999999999999999999998889999999
Q ss_pred CEEEEecccccccchHHhHHhhhcCcEEEEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeE
Q 004860 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRS 475 (727)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~ 475 (727)
|++++++|++||++++++|.+|++|+++++.+.. .++..+++.|+++++|++.++|++++.|..... ...++++||.
T Consensus 1760 d~~l~~~~~~fd~~~~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-~~~~~~~lr~ 1838 (3956)
T PRK12467 1760 DVVLQFTSFAFDVSVWELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDE-QVEHPLSLRR 1838 (3956)
T ss_pred cEEEEecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhcc-ccccCCCceE
Confidence 9999999999999999999999999999998643 467899999999999999999999999987422 2345789999
Q ss_pred EEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCC----CCccccccccCCCCceEEEECCCCCcCCCCCC
Q 004860 476 FASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQP 551 (727)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~ 551 (727)
+++|||+++++..+.+.+.+++++++|.||+||+++.++..... ......++|+|++|++++|+|++++++|.|+.
T Consensus 1839 v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~vp~G~~ 1918 (3956)
T PRK12467 1839 VVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEGRDSVPIGQPIANLSTYILDASLNPVPIGVA 1918 (3956)
T ss_pred EEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEeccccccccCCCCCcccccCCCEEEEECCCCCCCCCCCc
Confidence 99999999999998888887778899999999999765543321 11234689999999999999999999999996
Q ss_pred eeeeEEE-----ecccCCCCccccccccccccccccccC-CCceeeeeCceEEEecCceEEEEeecCCeeecCceeechH
Q 004860 552 CVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSV 625 (727)
Q Consensus 552 giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~ 625 (727)
|||+| +.||+++ ++.|+++|..+|+. +|.+||||||+|+|++||+|+|+||+|||||++|+||+|+
T Consensus 1919 --GEl~i~G~~v~~GYl~~------p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~D~qVki~G~rIel~ 1990 (3956)
T PRK12467 1919 --GELYLGGVGLARGYLNR------PALTAERFVADPFGTVGSRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELG 1990 (3956)
T ss_pred --eEEEeccccccccccCC------hhhhhhhCcCCCCCCCCccceeccceEEECCCCCEEEecccCceEEeCeEEechH
Confidence 99998 5677774 44788899999985 4789999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCC----hHHHHHHHHHHHHhhcCCCcccceEEEcCCCC
Q 004860 626 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ----PDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFP 701 (727)
Q Consensus 626 eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~----~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP 701 (727)
|||++|. +||+|.+|+|++.+ ...+ +++++||+...+...+ .....+.+++++++.||.||+|+.|+++++||
T Consensus 1991 eIE~~l~-~~p~V~~a~vv~~~-~~~~-~~lva~vv~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~l~~lP 2067 (3956)
T PRK12467 1991 EIEARLR-EQGGVREAVVIAQD-GANG-KQLVAYVVPTDPGLVDDDEAQVALRAILKNHLKASLPEYMVPAHLVFLARMP 2067 (3956)
T ss_pred HHHHHHH-hCCCcceEEEEEec-CCCC-cEEEEEEEecCcccccccccccccHHHHHHHHHhhCchhhCchhhhhhhcCC
Confidence 9999995 99999999999886 3344 7999999987643221 12245567788999999999999999999999
Q ss_pred CCCCchhhHHHHHHHHh
Q 004860 702 RTASNKLLRRVLRDQIK 718 (727)
Q Consensus 702 ~t~~GKvdR~~L~~~~~ 718 (727)
+|+||||||++|++...
T Consensus 2068 ~t~~GKidr~~L~~~~~ 2084 (3956)
T PRK12467 2068 LTPNGKLDRKALPAPDA 2084 (3956)
T ss_pred CCCCCCcchhhCCCCcc
Confidence 99999999999987543
No 4
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=2.8e-85 Score=868.97 Aligned_cols=638 Identities=15% Similarity=0.144 Sum_probs=519.4
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC--------
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-------- 82 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~-------- 82 (727)
|++-+++...+..+|.++|+++.+. +++++||++||++ |++.++.. .+++ ||+|+++++.....
T Consensus 2929 ntlp~r~~~~~~~~~~~~l~~v~~~~~~~~~h~~~~~~~-i~~~~~~~----~~~l--f~~~~~~~~~~~~~~~~~~~~~ 3001 (3956)
T PRK12467 2929 NTLPVIASPRAEQTVSDWLQQVQAQNLALREFEHTPLAD-IQRWAGQG----GEAL--FDSILVFENYPISEALKQGAPS 3001 (3956)
T ss_pred eceeEEEecCCCCCHHHHHHHHHHHHHHHHhccCCCHHH-HHHhhccC----CCCC--cceEEEeecCCchhhhhccCCC
Confidence 4677888888888898888888888 9999999999999 99998642 2455 88888887743211
Q ss_pred CccccCC-hhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCC
Q 004860 83 PLYWFPS-LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRT 158 (727)
Q Consensus 83 ~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~ 158 (727)
.+...+. .....+|++++.+.. ++++.+.+ |++ ++|++.++++|.++|.++|+++...++.+...+ +...
T Consensus 3002 ~~~~~~~~~~~~~~~~l~l~~~~-~~~~~~~~~y~~-----~~~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~l~~l~~~ 3075 (3956)
T PRK12467 3002 GLRFGAVSSREQTNYPLTLAVGL-GDTLELEFSYDR-----QHFDAAAIERLAESFDRLLQAMLNNPAARLGELPTLAAH 3075 (3956)
T ss_pred CceeecccccccccCceEEEecc-CcceeEEEEech-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCchhhccCCCHH
Confidence 1111111 123467888887765 45677777 988 999999999999999999999988888776654 3333
Q ss_pred CCCCCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCE
Q 004860 159 DKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDA 235 (727)
Q Consensus 159 ~~~~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~ 235 (727)
+....+..|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|+.|.+. +++|++
T Consensus 3076 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~gv~~g~~ 3147 (3956)
T PRK12467 3076 ERRQVLHAWNATAAAYPSERLVHQLIEAQVARTPEAPALVFGDQ--------QLSYAELNRRANRLAHRLIAIGVGPDVL 3147 (3956)
T ss_pred HHHHHHHhhccCCCCCCccccHHHHHHHHHHhCCCcceEeeCCc--------ccCHHHHHHHHHHHHHHHHHcCCCCCCe
Confidence 333344678876554443344443 335689999999999887 999999999999999999999 999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEc
Q 004860 236 IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLP 315 (727)
Q Consensus 236 Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 315 (727)
|+|+++|++++++++|||+|+|++||||||.+|.+++.+++++++++++|++....... ........+.+.
T Consensus 3148 V~l~~~~s~~~vv~~lavl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~---------~~~~~~~~~~~~ 3218 (3956)
T PRK12467 3148 VGVAVERSVEMIVALLAVLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQL---------PAPAGDTALTLD 3218 (3956)
T ss_pred EEEEeCCCHHHHHHHHHHHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhc---------ccccCCceeeec
Confidence 99999999999999999999999999999999999999999999999999987532110 000011111111
Q ss_pred CCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCC
Q 004860 316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK 395 (727)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 395 (727)
.. .+. . .....+.....++++|||+|||||||+||||+++|+++++.+.+....++++
T Consensus 3219 ~~-------------~~~-----~----~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~ 3276 (3956)
T PRK12467 3219 RL-------------DLN-----G----YSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELD 3276 (3956)
T ss_pred ch-------------hhc-----c----cCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCC
Confidence 00 000 0 0011122345689999999999999999999999999999999998999999
Q ss_pred CCCEEEEecccccccchHHhHHhhhcCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCcccee
Q 004860 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIR 474 (727)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr 474 (727)
++|++++++|++|+.+++++|.+|++|+++++.++ ..++..+++.|++++||++.++|++++.|++.. ...++++||
T Consensus 3277 ~~d~~l~~~~~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~--~~~~~~~lr 3354 (3956)
T PRK12467 3277 ANDRVLLFMSFSFDGAQERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDA--GGADCASLD 3354 (3956)
T ss_pred cCCEEEEecCccHhHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcc--cccCCCCce
Confidence 99999999999999999999999999999999873 257889999999999999999999999998653 234678999
Q ss_pred EEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCC----CccccccccCCCCceEEEECCCCCcCCCCC
Q 004860 475 SFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVPYPDDQ 550 (727)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~vld~~~~~~p~G~ 550 (727)
.+++|||+++++..+++.+.+++++++|.||+||+++.++...... .....++|+|++|++++|+|++++++|.|+
T Consensus 3355 ~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~~vp~G~ 3434 (3956)
T PRK12467 3355 IYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEAPYAPIGRPVAGRSIYVLDGQLNPVPVGV 3434 (3956)
T ss_pred EEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCCCCCCCccccCCCEEEEECCCCCCCCCCC
Confidence 9999999999999988888777888999999999987655433211 123468999999999999999999999999
Q ss_pred CeeeeEEE-----ecccCCCCcccccccccccccccccc-CCCceeeeeCceEEEecCceEEEEeecCCeeecCceeech
Q 004860 551 PCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM-YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 624 (727)
Q Consensus 551 ~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~-~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~ 624 (727)
+ |||+| +.||+++ ++.|+++|..+|+ .+|.|||||||+|+|++||+|+|+||+|+|||++|+||+|
T Consensus 3435 ~--GEL~i~G~~v~~GY~~~------~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~ 3506 (3956)
T PRK12467 3435 A--GELYIGGVGLARGYHQR------PSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIEL 3506 (3956)
T ss_pred C--ceEEEcchhhhhhccCC------cccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecH
Confidence 6 99998 5677774 4588999999998 6788999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCC
Q 004860 625 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 704 (727)
Q Consensus 625 ~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~ 704 (727)
+|||++|. +||+|.+|+|++..+ ..+ +++++||+...+.... .+.++++++++||.||+|..|+++++||+|+
T Consensus 3507 ~EIE~~l~-~~p~V~~a~v~~~~~-~~~-~~lva~v~~~~~~~~~----~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~ 3579 (3956)
T PRK12467 3507 GEIEARLL-QHPSVREAVVLARDG-AGG-KQLVAYVVPADPQGDW----RETLRDHLAASLPDYMVPAQLLVLAAMPLGP 3579 (3956)
T ss_pred HHHHHHHh-hCcccceEEEEEecC-CCC-cEEEEEEeCCCCCccc----HHHHHHHHhccCChhhCCCeeeeeccCCCCC
Confidence 99999995 999999999998754 345 7999999987643333 3445667889999999999999999999999
Q ss_pred CchhhHHHHHHHHh
Q 004860 705 SNKLLRRVLRDQIK 718 (727)
Q Consensus 705 ~GKvdR~~L~~~~~ 718 (727)
||||||++|++...
T Consensus 3580 ~GKidR~~L~~~~~ 3593 (3956)
T PRK12467 3580 NGKVDRKALPDPDA 3593 (3956)
T ss_pred CCccchhhcCCCCc
Confidence 99999999997653
No 5
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-81 Score=722.02 Aligned_cols=587 Identities=20% Similarity=0.263 Sum_probs=466.7
Q ss_pred CCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCCCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEE
Q 004860 118 ITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVW 197 (727)
Q Consensus 118 ~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~ 197 (727)
+.+|+.+++++++++..||..+.+.+ ..|++++.++++. .....+||.++..|.++++++++.....+||++|+++
T Consensus 7 ~~~y~~~~~~s~~~~~~fw~~~~~~~-~~~~~~~~~~~~~---~~~~~~wf~~~~~n~~~~~l~~~~~~~~~~~~~A~~~ 82 (647)
T PTZ00237 7 PFDYENDSNYANSNPESFWDEVAKKY-VHWDKMYDKVYSG---DEIYPDWFKGGELNTCYNVLDIHVKNPLKRDQDALIY 82 (647)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHhc-CeeeCCcccccCC---CCCchhhCCCCeeeHHHHHHHHhhcccCCCCceEEEE
Confidence 35678899999999999999999997 6999999999864 2234799999999999999988652223799999998
Q ss_pred ecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHH
Q 004860 198 REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRL 276 (727)
Q Consensus 198 ~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l 276 (727)
.+.. .+..+++||+||.++++++|+.|+++ |++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++|
T Consensus 83 ~~~~--~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l 160 (647)
T PTZ00237 83 ECPY--LKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARIGATHCVLFDGYSVKSLIDRI 160 (647)
T ss_pred EcCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHH
Confidence 6431 12246899999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HhcCeEEEEeecccccCCccccchHHHhhhC------CCcEEEEcCCCC--CC------CCCCCcCcccHHHHhcccCCC
Q 004860 277 RVSKAKGIFTQDFILRGGRKFPLYSKVLGAA------PLKAIVLPAIGN--DV------GIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 277 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~~--~~------~~~~~~~~~~~~~~~~~~~~~ 342 (727)
+++++++||+++...++.+.++....+.+.. ..+++++..... .. .....+....|++++......
T Consensus 161 ~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (647)
T PTZ00237 161 ETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDLKKIETIPTIPNTLSWYDEIKKIKEN 240 (647)
T ss_pred HhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCcccccccccccccCCCcccccHHHHHhhhccc
Confidence 9999999999887665655544444433221 123343322110 00 000111335677765432110
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChH-HHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhc
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (727)
............+++++||+|||||||+||||+++|++ +++........+....+|++++.++++|+.+...++++|+.
T Consensus 241 ~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~w~~~~~~~~~~l~~ 320 (647)
T PTZ00237 241 NQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTVVFSHSSIGWVSFHGFLYGSLSL 320 (647)
T ss_pred cCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCceEeeHHHHHHHHhC
Confidence 00111223345779999999999999999999999998 44433333445677889999999999999877778899999
Q ss_pred CcEEEEecCCC-C----hhhHHHHHHHhCCCEEEechHHHHHHHhcCC-----CCCCCccceeEEEeecCCCChhhHHHH
Q 004860 422 GATLALYQGSP-L----ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC-----LEGLDWTKIRSFASTGETSNVDDDLWL 491 (727)
Q Consensus 422 G~~lv~~~~~~-~----~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~-----~~~~~l~~Lr~i~~gGe~l~~~~~~~~ 491 (727)
|++++++++.. . +..+++.|+++++|++.++|++++.|++... ....++++||.+++|||++++++.+++
T Consensus 321 G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~ 400 (647)
T PTZ00237 321 GNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYDLSNLKEIWCGGEVIEESIPEYI 400 (647)
T ss_pred CcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccCcchheEEEecCccCCHHHHHHH
Confidence 99999987632 2 5689999999999999999999999987532 234578999999999999999999998
Q ss_pred HhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccC-CCCcccc
Q 004860 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYL-GASDRLL 570 (727)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~-~~~~~~~ 570 (727)
.+.+ +++++|.||+||++++++..........+++|+|+++++++|+|++|++++.|+. |||++..... +...+|+
T Consensus 401 ~~~~-g~~i~~~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d~~g~~~~~ge~--GEl~v~~p~~p~~~~gy~ 477 (647)
T PTZ00237 401 ENKL-KIKSSRGYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILSEDGKELNVNEI--GEVAFKLPMPPSFATTFY 477 (647)
T ss_pred HHhc-CCCEEeeechHHhChhhhccCCCCCCCCCCCccCcCCceEEEECCCCCCCCCCCc--eEEEEeccCCchhhCcee
Confidence 8876 5889999999999865543332222334789999999999999999999999985 9999942110 1111222
Q ss_pred -ccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCC
Q 004860 571 -NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (727)
Q Consensus 571 -~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~ 649 (727)
+++.+.++|...+ | ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||.|.+|+|++++++
T Consensus 478 ~~~~~~~~~f~~~~---g--~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~rI~p~eIE~~l~-~~p~V~eaavvg~~~~ 551 (647)
T PTZ00237 478 KNDEKFKQLFSKFP---G--YYNSGDLGFKDENGYYTIVSRSDDQIKISGNKVQLNTIETSIL-KHPLVLECCSIGIYDP 551 (647)
T ss_pred CCHHHHHHHHhCCC---C--EEECCcEEEECCCCeEEEEeccCCEEEECCEEeCHHHHHHHHH-hCCCceeeEEEeeEcC
Confidence 3344555664322 3 9999999999999999999999999999999999999999996 9999999999999999
Q ss_pred CCCceEEEEEEEecCC---CCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 650 GGGPEVLVIFVVLKKG---FTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 650 ~~~~~~l~a~vv~~~~---~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
..+ +.+++||+++++ ...+.+++.+.|++.++++|++|++|+.|+++++||+|+||||+|+.|++++.+.
T Consensus 552 ~~g-~~~~a~Vv~~~~~~~~~~~~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~ 624 (647)
T PTZ00237 552 DCY-NVPIGLLVLKQDQSNQSIDLNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLNDS 624 (647)
T ss_pred CCC-CEEEEEEEeccCccccCCCHHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcCC
Confidence 888 899999999853 2345678888899999999999999999999999999999999999999998644
No 6
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.5e-80 Score=712.03 Aligned_cols=582 Identities=23% Similarity=0.341 Sum_probs=464.9
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCe--eeecCCCC---CCCCCCcCCCCcccHhhhhccCCCCCCCCCCce
Q 004860 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPK--CILDRTDK---SKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (727)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~--~~l~~~~~---~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~ 193 (727)
.+|+.+++++++++..||..+.+.+ .|..++. ++++.... .....+||.++..|.++++++++. .+.+||++
T Consensus 30 ~~y~~~~~~s~~~~~~fw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~wf~g~~~N~~~~~l~~~~-~~~~~~~~ 106 (666)
T PLN02654 30 QQYMEMYKRSVDDPAGFWSDIASQF--YWKQKWEGDEVCSENLDVRKGPISIEWFKGGKTNICYNCLDRNV-EAGNGDKI 106 (666)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHhC--CeecCCCcceEeccCCCcccCCccccccCCCEeeHHHHHHHHhh-ccCCCCCE
Confidence 3578899999999999999999985 5777763 56533111 123579999999999999999865 12589999
Q ss_pred EEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHH
Q 004860 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (727)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l 272 (727)
|+++.+. +.+..+++||+||.++++++|++|++. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++
T Consensus 107 Al~~~~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Gav~vpv~~~~~~~~l 184 (666)
T PLN02654 107 AIYWEGN--EPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGAVHSVVFAGFSAESL 184 (666)
T ss_pred EEEEEcC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHH
Confidence 9998543 122345899999999999999999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEEeecccccCCccccchHHHhhhCC---------CcEEEEcCCCC--CCCCC-CCcCcccHHHHhcccC
Q 004860 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP---------LKAIVLPAIGN--DVGIP-LREQDLSWKDFLSSVD 340 (727)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~--~~~~~-~~~~~~~~~~~~~~~~ 340 (727)
.+++++++++++|+++...++++.++....+..... ..++....... ..... .......|+++.....
T Consensus 185 ~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (666)
T PLN02654 185 AQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKREDTKWQEGRDVWWQDVVPNYP 264 (666)
T ss_pred HHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccccccccccccccCCcccHHHHhhcCC
Confidence 999999999999999987777666655444332211 01111111100 00000 0112344666543211
Q ss_pred CCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHH-HHHhhchhcCCCCCCEEEEecccccccch-HHhHHh
Q 004860 341 YHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR-CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (727)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (727)
...+.....++|++||+|||||||+||||+++|++++. ........++++++|++++.+|++|.++. +.++++
T Consensus 265 -----~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~ 339 (666)
T PLN02654 265 -----TKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADCGWITGHSYVTYGP 339 (666)
T ss_pred -----CCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCchhhhhhHHHHHHH
Confidence 11122345679999999999999999999999999764 44445566889999999999999999987 567899
Q ss_pred hhcCcEEEEecCC---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHh
Q 004860 419 FLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (727)
Q Consensus 419 l~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~ 493 (727)
|+.|++++++++. +++..++++|+++++|++.++|++++.|.+... ....++++||.++++||+++++..+++.+
T Consensus 340 L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~Ge~l~~~~~~~~~~ 419 (666)
T PLN02654 340 MLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVGEPINPSAWRWFFN 419 (666)
T ss_pred HHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEecCCCCHHHHHHHHH
Confidence 9999999999763 467899999999999999999999999987643 24467899999999999999999999988
Q ss_pred hCCC--CcccccccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCcccc
Q 004860 494 KAWY--NAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLL 570 (727)
Q Consensus 494 ~~~~--~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~ 570 (727)
.++. +++.+.||+||+++..+...+. .+...+++|+|++|++++|+|++|++++.|+. |||++..++.+.+..|+
T Consensus 420 ~~g~~~~~i~~~yg~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~g~~~~~~~~--Gel~v~~~~p~~~~gy~ 497 (666)
T PLN02654 420 VVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVDEKGKEIEGECS--GYLCVKKSWPGAFRTLY 497 (666)
T ss_pred HhCCCCCceeccccccccCCeeeccCCCCCCCCCCccCCCCCCceEEEECCCCCCCCCCCc--eEEEEcCCCchhhhhhc
Confidence 8753 6899999999998755443331 24466789999999999999999999998874 99999543322222333
Q ss_pred cc-ccccc-cccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecC
Q 004860 571 NA-DHEEV-YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (727)
Q Consensus 571 ~~-~~~~~-~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~ 648 (727)
++ +.+.. +|... +| ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+++|+++++
T Consensus 498 ~~~~~~~~~~~~~~---~g--~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~-~~p~V~eaaVvg~~d 571 (666)
T PLN02654 498 GDHERYETTYFKPF---AG--YYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALV-SHPQCAEAAVVGIEH 571 (666)
T ss_pred CChHHHHHhhhhcC---CC--EEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEeeEc
Confidence 32 23332 33221 23 9999999999999999999999999999999999999999996 999999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 649 ~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+..| +.+++||+++++...+ +++++.|+++++++|++|++|+.|+++++||+|+|||++|+.|++++.+.
T Consensus 572 ~~~g-e~~~a~Vvl~~~~~~~-~~l~~~l~~~~~~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~~~ 641 (666)
T PLN02654 572 EVKG-QGIYAFVTLVEGVPYS-EELRKSLILTVRNQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQ 641 (666)
T ss_pred CCCC-eEEEEEEEECCCCCCC-HHHHHHHHHHHHHhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHcCC
Confidence 8888 9999999999876554 57788899999999999999999999999999999999999999998764
No 7
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.7e-83 Score=863.10 Aligned_cols=641 Identities=19% Similarity=0.204 Sum_probs=523.3
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC-------C
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-------P 83 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~-------~ 83 (727)
|++-+++...+..+|.+.++++.+. +++++||++||++ +++.|++.|..+.+|+ ||+|+++++..... .
T Consensus 340 n~lplr~~~~~~~tf~~~l~~v~~~~~~a~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 416 (5163)
T PRK12316 340 NTQVLRSVFDGRTRVATLLAGVKDTVLGAQAHQDLPFER-LVEALKVERSLSHSPL--FQVMYNHQPLVADIEALDTVAG 416 (5163)
T ss_pred eeEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccCCHHH-HHHHhCCCCCCCCCCc--EEEEEEeecccccccccccCCC
Confidence 3455677777777888888888888 9999999999999 9999999999888998 99999988632111 1
Q ss_pred cc--ccCChhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCC
Q 004860 84 LY--WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRT 158 (727)
Q Consensus 84 ~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~ 158 (727)
+. ..+......++|+.+.+.+.++++.+.+ |+. ++|++++++++.++|.++|+++..+++.+...+ ++..
T Consensus 417 ~~~~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~i~~~p~~~i~~l~~~~~~ 491 (5163)
T PRK12316 417 LEFGQLEWKSRTTQFDLTLDTYEKGGRLHAALTYAT-----DLFEARTVERMARHWQNLLRGMVENPQARVDELPMLDAE 491 (5163)
T ss_pred ceEEeeccCCCccceeEEEEEEEcCCcEEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhccccccccCCCCCHH
Confidence 11 1122234568899998888888888888 999 999999999999999999999988888877765 3333
Q ss_pred CCCCCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCE
Q 004860 159 DKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDA 235 (727)
Q Consensus 159 ~~~~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~ 235 (727)
+.......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|+.|.+. +++|++
T Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~p~~~A~~~~~~--------~~TY~eL~~~~~~lA~~L~~~gv~~g~~ 563 (5163)
T PRK12316 492 ERGQLVEGWNATAAEYPLQRGVHRLFEEQVERTPEAPALAFGEE--------TLDYAELNRRANRLAHALIERGVGPDVL 563 (5163)
T ss_pred HHHHHHHHhcCccccCCCCCCHHHHHHHHHHHCCCCeEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCE
Confidence 332333456544322221223332 234689999999998777 999999999999999999999 999999
Q ss_pred EEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEc
Q 004860 236 IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLP 315 (727)
Q Consensus 236 Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 315 (727)
|+|+++|++++++++|||+|+|++|||+||.+|.+++.+++++++++++|++....... + ......++.+.
T Consensus 564 V~l~~~~s~~~i~~~la~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~---~------~~~~~~~~~~~ 634 (5163)
T PRK12316 564 VGVAMERSIEMVVALLAILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKL---P------LAAGVQVLDLD 634 (5163)
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhC---C------cccCceEEEec
Confidence 99999999999999999999999999999999999999999999999999987532110 0 00011112111
Q ss_pred CCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCC
Q 004860 316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK 395 (727)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 395 (727)
... .+ ..... ...+.....++++|||+|||||||+||||+++|+++++.+.+....++++
T Consensus 635 ~~~------------~~---~~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~ 694 (5163)
T PRK12316 635 RPA------------AW---LEGYS-----EENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLG 694 (5163)
T ss_pred Ccc------------hh---hccCC-----CCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCC
Confidence 000 00 00000 11122334678999999999999999999999999999999999999999
Q ss_pred CCCEEEEecccccccchHHhHHhhhcCcEEEEecC--CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccce
Q 004860 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (727)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~--~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~L 473 (727)
++|++++++|++|+++++++|.+|++|+++++.+. ..++..+++.|++++||++.++|++++.|++... ..++++|
T Consensus 695 ~~d~~l~~~p~~fd~~~~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~--~~~~~~l 772 (5163)
T PRK12316 695 VGDTVLQKTPFSFDVSVWEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDED--VASCTSL 772 (5163)
T ss_pred CCCEEEeeCCeehHHHHHHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccc--cccCCCc
Confidence 99999999999999999999999999999999864 3578899999999999999999999999987532 3357899
Q ss_pred eEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCC-CCCccccccccCCCCceEEEECCCCCcCCCCCCe
Q 004860 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (727)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~g 552 (727)
|.+++|||++++++.+.+.+.+++++++|.||+||+++.++.... .......++|+|++|++++|+|++++++|.|+.
T Consensus 773 ~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~- 851 (5163)
T PRK12316 773 RRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDSVPIGRPIANLACYILDANLEPVPVGVL- 851 (5163)
T ss_pred cEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCCCCCccccCCCEEEEECCCCCCCCCCCc-
Confidence 999999999999999988888888899999999999864433322 222345689999999999999999999999996
Q ss_pred eeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHH
Q 004860 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (727)
Q Consensus 553 iGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (727)
|||+| +.||++ +++.|++.|..+|+.+|.+||+|||+|++++||+|+|+||+|||||++|+||+|+||
T Consensus 852 -GEl~i~G~~v~~GYl~------~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EI 924 (5163)
T PRK12316 852 -GELYLAGRGLARGYHG------RPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEI 924 (5163)
T ss_pred -eEEEecccccChhhCC------ChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHH
Confidence 99998 467776 445788899999988889999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCch
Q 004860 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 707 (727)
Q Consensus 628 E~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GK 707 (727)
|++|. +||+|.+|+|++.+ + +.++|||++.++.....++ ++++++++||+||+|+.|+++++||+|+|||
T Consensus 925 E~~l~-~~p~V~~a~V~~~~----~-~~lva~vv~~~~~~~~~~~----l~~~l~~~Lp~y~vP~~i~~v~~lP~t~~GK 994 (5163)
T PRK12316 925 EARLL-EHPWVREAAVLAVD----G-KQLVGYVVLESEGGDWREA----LKAHLAASLPEYMVPAQWLALERLPLTPNGK 994 (5163)
T ss_pred HHHHH-hCCCcceEEEEEcC----C-CeEEEEEEccCCCCCCHHH----HHHHHHhhCCCccCCCeEEEHhhCCCCCCCC
Confidence 99995 99999999999875 4 7899999988765444444 4555778899999999999999999999999
Q ss_pred hhHHHHHHHH
Q 004860 708 LLRRVLRDQI 717 (727)
Q Consensus 708 vdR~~L~~~~ 717 (727)
+||++|++..
T Consensus 995 idr~~L~~~~ 1004 (5163)
T PRK12316 995 LDRKALPAPE 1004 (5163)
T ss_pred hhHHhhcCcc
Confidence 9999998754
No 8
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=3e-83 Score=862.70 Aligned_cols=633 Identities=18% Similarity=0.201 Sum_probs=522.1
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC----Cccc
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP----PLYW 86 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~----~~~~ 86 (727)
|++-+++......+|.+.++++.+. +++++||++||++ |++.++++++.+.+|+ ||+||++++..... ....
T Consensus 2889 ntlPlrv~l~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 2965 (5163)
T PRK12316 2889 NTQVLRAQVDAQLAFRDLLGQVKEQALGAQAHQDLPFEQ-LVEALQPERSLSHSPL--FQVMYNHQSGERAAAQLPGLHI 2965 (5163)
T ss_pred cceeEEEecCCCCCHHHHHHHHHHHHHHHHHcCCCCHHH-HHHHhccccccCCCCc--eeEEEeeeccccccccCCCcee
Confidence 4456677777888888888888888 9999999999999 9999999998888888 99999998754322 1111
Q ss_pred c--CChhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCCCCC
Q 004860 87 F--PSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKS 161 (727)
Q Consensus 87 ~--~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~ 161 (727)
. .......++|+++.+...++++...+ |+. ++|++.++++|.++|.++|+++...++.+...+ ++..+..
T Consensus 2966 ~~~~~~~~~~~~dL~l~v~~~~~~l~~~~~y~~-----~~~~~~~i~~l~~~f~~lL~~l~~~p~~~i~~l~~~~~~~~~ 3040 (5163)
T PRK12316 2966 ESFAWDGAATQFDLALDTWESAEGLGASLTYAT-----DLFDARTVERLARHWQNLLRGMVENPQRSVDELAMLDAEERG 3040 (5163)
T ss_pred EeeeccCCccceeeEEEEEecCCcEEEEEEECc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCchhhccCCCHHHHH
Confidence 1 11234578899998888888888888 999 999999999999999999999988887776654 3333333
Q ss_pred CCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEE
Q 004860 162 KHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238 (727)
Q Consensus 162 ~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai 238 (727)
..+..|+......+...+++. ..+++++||++|+++.++ .+||+||+++++++|++|.+. +++|++|+|
T Consensus 3041 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~gv~~~~~V~l 3112 (5163)
T PRK12316 3041 QLLEAWNATAAEYPLERGVHRLFEEQVERTPDAVALAFGEQ--------RLSYAELNRRANRLAHRLIERGVGPDVLVGV 3112 (5163)
T ss_pred HHHHHhCCCCcCCCCcCCHHHHHHHHHHhCCCCeeEeeCCe--------EEeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 334567765444333334443 345689999999999887 999999999999999999999 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCC
Q 004860 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG 318 (727)
Q Consensus 239 ~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 318 (727)
+++|++++++++|||+|+|++||||||.+|.+|+.+++++++++++|++.... .+ ......++.+....
T Consensus 3113 ~~~~s~~~iv~~lail~aGa~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~-----~~------~~~~~~~~~~~~~~ 3181 (5163)
T PRK12316 3113 AVERSLEMVVGLLAILKAGGAYVPLDPEYPEERLAYMLEDSGAQLLLSQSHLR-----LP------LAQGVQVLDLDRGD 3181 (5163)
T ss_pred EccCCHHHHHHHHHHHHhCceeeecCCCCcHHHHHHHHHhcCCCEEEeCcccc-----CC------ccCCccEEEecccc
Confidence 99999999999999999999999999999999999999999999999976420 00 00011122221100
Q ss_pred CCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCC
Q 004860 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGD 398 (727)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d 398 (727)
.. .....+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|
T Consensus 3182 ------------------~~-----~~~~~~~~~~~~~~~ayii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d 3238 (5163)
T PRK12316 3182 ------------------EN-----YAEANPAIRTMPENLAYVIYTSGSTGKPKGVGIRHSALSNHLCWMQQAYGLGVGD 3238 (5163)
T ss_pred ------------------cc-----ccccCCCCCCCCCCeEEEEeCCCCCCCCCEEEEccHHHHHHHHHHHHhhCCCccc
Confidence 00 0011122345678999999999999999999999999999999998899999999
Q ss_pred EEEEecccccccchHHhHHhhhcCcEEEEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEE
Q 004860 399 VYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSF 476 (727)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i 476 (727)
+++++++++||.+++++|.+|++|+++++.+.. .++..+.+.++++++|++.++|+++..+.... ....+++||.+
T Consensus 3239 ~~l~~~~~~fd~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ps~~~~l~~~~--~~~~~~~lr~~ 3316 (5163)
T PRK12316 3239 RVLQFTTFSFDVFVEELFWPLMSGARVVLAGPEDWRDPALLVELINSEGVDVLHAYPSMLQAFLEEE--DAHRCTSLKRI 3316 (5163)
T ss_pred EEEeecCccHHHHHHHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCcEEEcCHHHHHHHHhcc--ccccCCcceEE
Confidence 999999999999999999999999999998643 36788999999999999999999999988653 23346799999
Q ss_pred EeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeee
Q 004860 477 ASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGE 555 (727)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGe 555 (727)
++|||++++++.++|.. +++++|.||+||+++.++..... ......++|+|++|++++|+|++++++|.|+. ||
T Consensus 3317 ~~gGe~l~~~~~~~~~~---~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~G~~--GE 3391 (5163)
T PRK12316 3317 VCGGEALPADLQQQVFA---GLPLYNLYGPTEATITVTHWQCVEEGKDAVPIGRPIANRACYILDGSLEPVPVGAL--GE 3391 (5163)
T ss_pred EEccccCCHHHHHHHHh---CCcEeeccCCCccEeeEeEEeccCCCCCCCccceecCCCEEEEECCCCCCCCCCCC--ce
Confidence 99999999999888872 56799999999999876654432 22345789999999999999999999999996 99
Q ss_pred EEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHH
Q 004860 556 VGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERV 630 (727)
Q Consensus 556 l~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~ 630 (727)
|+| +.||+++ ++.|+++|..+|+.+|.+||+|||+||+++||.|+|+||+|+|||++|+||+|+|||++
T Consensus 3392 l~i~G~~v~~GY~~~------~~~t~~~f~~~p~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~qvKi~G~rIel~eIE~~ 3465 (5163)
T PRK12316 3392 LYLGGEGLARGYHNR------PGLTAERFVPDPFVPGERLYRTGDLARYRADGVIEYIGRVDHQVKIRGFRIELGEIEAR 3465 (5163)
T ss_pred EEecccccchhcCCC------hhhchhhCCCCCCCCCCeeEecCceEEECCCCCEEEecccCCeEeeCcEeeChHHHHHH
Confidence 998 5677764 45889999999998899999999999999999999999999999999999999999999
Q ss_pred HhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhH
Q 004860 631 CDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLR 710 (727)
Q Consensus 631 l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR 710 (727)
|. +||+|.+|+|++.. + ++++|||++..+.... .+.++++|++.||.||+|..|+++++||+|+|||+||
T Consensus 3466 l~-~~~~V~~a~v~~~~----~-~~l~a~vv~~~~~~~~----~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t~~GKvdr 3535 (5163)
T PRK12316 3466 LL-EHPWVREAVVLAVD----G-RQLVAYVVPEDEAGDL----REALKAHLKASLPEYMVPAHLLFLERMPLTPNGKLDR 3535 (5163)
T ss_pred HH-hCCCcceEEEEEcc----C-CeEEEEEEcCCcCccc----HHHHHHHHHhhCCcccCcceeeeHhhcCCCCCcchhH
Confidence 95 99999999998865 4 7899999987543322 3446667889999999999999999999999999999
Q ss_pred HHHHHHH
Q 004860 711 RVLRDQI 717 (727)
Q Consensus 711 ~~L~~~~ 717 (727)
++|++..
T Consensus 3536 ~~L~~~~ 3542 (5163)
T PRK12316 3536 KALPRPD 3542 (5163)
T ss_pred HhcCCCc
Confidence 9997643
No 9
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=1.9e-79 Score=705.06 Aligned_cols=576 Identities=23% Similarity=0.379 Sum_probs=464.1
Q ss_pred CHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCCCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEec
Q 004860 120 SFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWRE 199 (727)
Q Consensus 120 ~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~ 199 (727)
+|+.+++++++++..||..+++. +.|++++.++++.. ..+..+||.++..|.++++++++. +.+|+++|+++.+
T Consensus 2 ~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~~ 75 (628)
T TIGR02316 2 RYEEFYQRSIEQPEAFWAEQARR--IDWQTPPQRILDYS--NPPFARWFAGGRTNLCHNALDRHL--DERGEQLALVTVS 75 (628)
T ss_pred CHHHHHHHHhcCHHHHHHHHHHh--CCeecCCcccccCC--CCCcCccCCCCEeeHHHHHHHHHh--CcCCCCeEEEEEc
Confidence 46888999999999999999997 47999999987542 245679999999999999998765 6789999999854
Q ss_pred CCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHh
Q 004860 200 DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRV 278 (727)
Q Consensus 200 ~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~ 278 (727)
. +.+..+++||+||+++++++|++|+++ +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.+++++
T Consensus 76 ~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~ 153 (628)
T TIGR02316 76 S--ETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAIHSVVFGGFASHSLALRIDD 153 (628)
T ss_pred C--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEEecCCCCCHHHHHHHHHh
Confidence 2 123345899999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEEeecccccCCccccchHHHhhh------CCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCcc
Q 004860 279 SKAKGIFTQDFILRGGRKFPLYSKVLGA------APLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (727)
Q Consensus 279 ~~~~~il~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (727)
++++++|+++...++++.++....+.+. ....++++....... ........+|.++...... ...+...
T Consensus 154 ~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~ 228 (628)
T TIGR02316 154 ATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM-RLIPGRDVDYAALRTQHED----AQVPVEW 228 (628)
T ss_pred cCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc-CcccCccccHHHHhhcccc----CCCCcee
Confidence 9999999998776666665554443321 123344443221110 0111134567666543211 1112223
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChHHH-HHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEEecC
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~ 430 (727)
..+++++||+|||||||+||||+++|++++ +........++++++|++++.++++|+++. +.++++|+.|++++++++
T Consensus 229 ~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~L~~G~~~v~~~~ 308 (628)
T TIGR02316 229 LESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGWVVGHSYIVYAPLLAGAATVLYEG 308 (628)
T ss_pred cCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCeeehhhHHHHHHHhccceEEEeCC
Confidence 467999999999999999999999999975 444455566889999999999999999986 668899999999999875
Q ss_pred C---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccc
Q 004860 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (727)
Q Consensus 431 ~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (727)
. +++..++++|+++++|+++++|++++.|.+... ....++++||.+++|||++++++.+++...+ +..+++.||
T Consensus 309 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~l~~~~~~~~~~~~-~~~~~~~yG 387 (628)
T TIGR02316 309 LPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEPLDEPTAHWITDGL-GKPVIDNYW 387 (628)
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHh-CCCEEeccc
Confidence 3 467889999999999999999999999987642 2355789999999999999999998887765 578999999
Q ss_pred ccccccccccCCC---CCCccccccccCCCCceEEEECC-CCCcCCCCCCeeeeEEEe-c---ccCCCCcccccc-cccc
Q 004860 506 GTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLF-P---LYLGASDRLLNA-DHEE 576 (727)
Q Consensus 506 ~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v~-~---~y~~~~~~~~~~-~~~~ 576 (727)
+||++..++.... ..+...+++|+|++|++++|+|+ +|+++|.|+. |||++. + +|+. .++++ +.+.
T Consensus 388 ~TE~~~~~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d~~~g~~~~~g~~--Gel~v~gp~~~g~~~---~~~~~~~~~~ 462 (628)
T TIGR02316 388 QTETGWPVLAIMPGLDLKPVKLGSPGLPMYGYHLRVLDEATGRPCGPNEK--GVLTVVPPLPPGCLS---TVWGDDARFL 462 (628)
T ss_pred ccccCceeecCCCCCCcCCCCCCCcccCcCCceEEEEECCCCCCCCCCCc--EEEEEecCCCccccc---cccCChHHHH
Confidence 9999854433222 12334578899999999999997 7999999985 999994 2 3332 22232 2221
Q ss_pred -ccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceE
Q 004860 577 -VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (727)
Q Consensus 577 -~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~ 655 (727)
.+|... +.+||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++++++..| +.
T Consensus 463 ~~~~~~~----~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~-~~p~V~ea~Vvg~~d~~~g-~~ 536 (628)
T TIGR02316 463 KTYWSHF----KRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS-SHPSVAEVAVVGVHDELKG-QV 536 (628)
T ss_pred HhhhhcC----CCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeeecCCCC-eE
Confidence 222211 2459999999999999999999999999999999999999999996 9999999999999999888 99
Q ss_pred EEEEEEecCCCCC----ChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 656 LVIFVVLKKGFTS----QPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 656 l~a~vv~~~~~~~----~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+++||+++++... +.+.+.+.|+++++++|++|++|+.|+++++||+|+|||++|+.|++++++.
T Consensus 537 ~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~~~ 605 (628)
T TIGR02316 537 AVVFAILKESDSAGDAHDPHAVETGMMDCVVRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAEGR 605 (628)
T ss_pred EEEEEEEcCCcccccccchHHHHHHHHHHHHHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHcCC
Confidence 9999999876432 2346777889999999999999999999999999999999999999988654
No 10
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.7e-82 Score=793.18 Aligned_cols=667 Identities=16% Similarity=0.131 Sum_probs=505.5
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCCCccccCCh
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPPLYWFPSL 90 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 90 (727)
|...+++...+..+|.+.++++.++ +++++||++||++ |++.+++.+..+.+|. +|+++|..+...... .+
T Consensus 80 ~~lplr~~~~~~~t~~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~~~~~~p~-lf~~~~~~~~~~~~~--~~---- 151 (1389)
T TIGR03443 80 RPFVLRLNITPELSFLQLYAKVSEEEKEGASDIGVPFDE-LSEHIQAAKKLERTPP-LFRLAFQDAPDNQQT--TY---- 151 (1389)
T ss_pred ceEEEEecCCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccCCCCCCc-cEEEEeecCCccccc--cc----
Confidence 5567788888889999999999988 9999999999999 9999999887777762 267655433221111 11
Q ss_pred hhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCCCCCCC----
Q 004860 91 DQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSKH---- 163 (727)
Q Consensus 91 ~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~~---- 163 (727)
....++||.+.+.+.++++.+.+ |+. ++|++.+++++.++|..+|+++...++.+...+ ++..+....
T Consensus 152 ~~~~~~dl~~~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~f~~lL~~~~~~p~~~l~~l~~~~~~~~~~~~~~~ 226 (1389)
T TIGR03443 152 STGSTTDLTVFLTPSSPELELSIYYNS-----LLFSSDRITIVADQLAQLLSAASSNPDEPIGKVSLITPSQKSLLPDPT 226 (1389)
T ss_pred ccCCccceEEEEEecCCcEEEEEEEch-----hcCCHHHHHHHHHHHHHHHHHHHhCcCCceecccCCCHHHHhhhhccc
Confidence 34568899988888888888888 999 999999999999999999999988888877654 332221111
Q ss_pred -CCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCC-CCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEc
Q 004860 164 -GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDM 240 (727)
Q Consensus 164 -~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~ 240 (727)
...|... .......+.+ +++++||++|+++..... .....+++||+||+++++++|++|.+. +++||+|+|++
T Consensus 227 ~~~~~~~~--~~~l~~~~~~--~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~ 302 (1389)
T TIGR03443 227 KDLDWSGF--RGAIHDIFAD--NAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYA 302 (1389)
T ss_pred cccCcCcc--cCcHHHHHHH--HHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEe
Confidence 1224221 0111222332 457899999998642210 011235899999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh-C----CCcEEEEc
Q 004860 241 PMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-A----PLKAIVLP 315 (727)
Q Consensus 241 ~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~----~~~~~v~~ 315 (727)
+|++++++++|||+|+|++++|+||.+|.+++.+++++++++++++...... ........... . ....+.+.
T Consensus 303 ~~~~~~i~~~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (1389)
T TIGR03443 303 YRGVDLVVAVMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGT---LDQLVRDYIDKELELRTEIPALALQ 379 (1389)
T ss_pred cCCHHHHHHHHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccc---cchhhhhhhhcccccccccceEEec
Confidence 9999999999999999999999999999999999999999999998764210 00111111000 0 00011111
Q ss_pred CCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCC
Q 004860 316 AIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK 395 (727)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~ 395 (727)
.......... .....+....... ...........+++++||+|||||||.||||+++|+++++.+.+....+++.
T Consensus 380 ~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~ 454 (1389)
T TIGR03443 380 DDGSLVGGSL---EGGETDVLAPYQA--LKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLS 454 (1389)
T ss_pred cccccccccc---ccccccccccccc--cccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCC
Confidence 0000000000 0000011100000 0000111234678999999999999999999999999999998888889999
Q ss_pred CCCEEEEecccccccchHHhHHhhhcCcEEEEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccce
Q 004860 396 VGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (727)
Q Consensus 396 ~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~L 473 (727)
++|+++++++++|+.+++++|.+|+.|+++++++.. .++..+++.|++++||++.++|++++.|.... ...+++|
T Consensus 455 ~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~---~~~~~~l 531 (1389)
T TIGR03443 455 ENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA---TTPIPSL 531 (1389)
T ss_pred CCCEEEEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc---cccCCCc
Confidence 999999999999999999999999999999998643 25778999999999999999999999987542 2357899
Q ss_pred eEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCC----------CccccccccCCCCceEEEECCC-
Q 004860 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ----------PQAFGAFSTATMTAGLVILDEC- 542 (727)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~----------~~~~~~iG~p~~~~~~~vld~~- 542 (727)
|.+++|||++++.....+....++++++|.||+||++++++...... .....++|+|+++++++|+|++
T Consensus 532 r~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~ 611 (1389)
T TIGR03443 532 HHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVNRND 611 (1389)
T ss_pred cEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEECCcc
Confidence 99999999999998888877777889999999999986554322110 1124679999999999999965
Q ss_pred -CCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccC----------------------CCceeeeeC
Q 004860 543 -GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY----------------------KGMCLRRHG 594 (727)
Q Consensus 543 -~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~----------------------~g~~~yrTG 594 (727)
++++|.|+. |||+| +.||++. ++.|++.|..+|+. ++.+||+||
T Consensus 612 ~~~~~~~G~~--GEL~i~G~~v~~GY~~~------p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TG 683 (1389)
T TIGR03443 612 RTQTCGVGEV--GEIYVRAGGLAEGYLGL------PELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTG 683 (1389)
T ss_pred CCCcCCCCCc--eEEEecccccchhcCCC------hhHhhhhccCCcccCcccccccccccccccccccCCCccceeecC
Confidence 578999996 99998 4677764 44777788765431 346799999
Q ss_pred ceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC-CCC----
Q 004860 595 DIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-TSQ---- 669 (727)
Q Consensus 595 Dl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~-~~~---- 669 (727)
|+|++++||+|+|+||.|||||++|+||+|.|||++|. +||.|.+++|++.++...+ +.+++|+++..+. ...
T Consensus 684 Dlg~~~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~-~~p~V~~a~v~~~~~~~~~-~~lva~vv~~~~~~~~~~~~~ 761 (1389)
T TIGR03443 684 DLGRYLPDGNVECCGRADDQVKIRGFRIELGEIDTHLS-QHPLVRENVTLVRRDKDEE-PTLVSYIVPQDKSDELEEFKS 761 (1389)
T ss_pred CceeEcCCCCEEEecccCCEEEeCcEEecHHHHHHHHH-hCcchheeEEEEeeCCCCC-eEEEEEEeccCcccccccccc
Confidence 99999999999999999999999999999999999995 8999999999988877666 8999999986321 100
Q ss_pred -----------------hHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHH
Q 004860 670 -----------------PDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 670 -----------------~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 716 (727)
.....+.++++++++||.||+|..|+++++||+|+||||||++|++.
T Consensus 762 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~ 825 (1389)
T TIGR03443 762 EVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFP 825 (1389)
T ss_pred ccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCC
Confidence 01234567888999999999999999999999999999999999754
No 11
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.1e-82 Score=851.94 Aligned_cols=642 Identities=16% Similarity=0.146 Sum_probs=512.1
Q ss_pred HHHHcCCCchhh---HHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCCC----
Q 004860 12 DLMKVGLKLEEA---EEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP---- 83 (727)
Q Consensus 12 ~~~~~~~~~~~~---~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~---- 83 (727)
|++-+|+...+. .++.++|+++.+. +++++||++||++ +++..+..+.. ++ |++++++++......
T Consensus 3551 Ntlp~Rv~~~~~~~~~t~~~~L~~v~~~~~~~~~~q~~~l~~-i~~~~~~~~~~---~L--F~t~~v~~n~~~~~~~~~~ 3624 (4334)
T PRK05691 3551 NSIALRVQLPAAGQRCSVRQWLQGLLDSNMELREYEYLPLVA-IQECSELPKGQ---PL--FDSLFVFENAPVEVSVLDR 3624 (4334)
T ss_pred cccceEEeeCCccCCCcHHHHHHHHHHHHHHHhhccCCCHHH-HHHHhcCCCCC---CC--ccEEEEeecCCcchhhhcc
Confidence 355666665432 4666666666666 9999999999999 99887765444 34 777777776532210
Q ss_pred ---ccccCC-hhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ec
Q 004860 84 ---LYWFPS-LDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LD 156 (727)
Q Consensus 84 ---~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~ 156 (727)
...... .....+++|++.+.. ++.+...+ |++ ++|++.++++|.++|.++|+++...++.+...+ ++
T Consensus 3625 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~l~~~l~y~~-----~~~~~~~~~~l~~~f~~~L~~l~~~~~~~~~~~~~~~ 3698 (4334)
T PRK05691 3625 AQSLNASSDSGRTHTNFPLTAVCYP-GDDLGLHLSYDQ-----RYFDAPTVERLLGEFKRLLLALVQGFHGDLSELPLLG 3698 (4334)
T ss_pred cccccccccccccccCCCeEEEEec-CCceEEEEEEch-----hhCCHHHHHHHHHHHHHHHHHHHhCcCCChhhcCCCC
Confidence 000010 123356677665443 34566666 888 999999999999999999999988888777665 33
Q ss_pred CCCCCCCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCC
Q 004860 157 RTDKSKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKG 233 (727)
Q Consensus 157 ~~~~~~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~g 233 (727)
..+....+..|+......+...+++. +.|++++||++|+++.+. ++||+||+++++++|++|.+. +++|
T Consensus 3699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Av~~~~~--------~~tY~eL~~~~~~la~~L~~~gv~~~ 3770 (4334)
T PRK05691 3699 EQERDFLLDGCNRSERDYPLEQSYVRLFEAQVAAHPQRIAASCLDQ--------QWSYAELNRAANRLGHALRAAGVGVD 3770 (4334)
T ss_pred HHHHHHHHHhhCCccCCCccccCHHHHHHHHHHhCCCceEEEcCCC--------cccHHHHHHHHHHHHHHHHHcCCCCC
Confidence 33333445567766555444555554 356789999999999888 999999999999999999999 9999
Q ss_pred CEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC----C
Q 004860 234 DAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----L 309 (727)
Q Consensus 234 d~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~ 309 (727)
++|+|++++|+++++++|||+|+|++||||||.+|.+|+.+++++++++++|+++...... ..+..... .
T Consensus 3771 ~~V~v~~~~s~~~~v~~lavlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~------~~~~~~~~~~~~~ 3844 (4334)
T PRK05691 3771 QPVALLAERGLDLLGMIVGSFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQA------RALLDELGCANRP 3844 (4334)
T ss_pred CEEEEEeCCCHHHHHHHHHHHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchh------hhhhccccccccc
Confidence 9999999999999999999999999999999999999999999999999999988543111 11111110 0
Q ss_pred cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc
Q 004860 310 KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW 389 (727)
Q Consensus 310 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~ 389 (727)
.+.+. ++..... .....+.....|+++|||+|||||||+||||+++|+++++.+.+..
T Consensus 3845 ~~~~~------------------~~~~~~~----~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~ 3902 (4334)
T PRK05691 3845 RLLVW------------------EEVQAGE----VASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKV 3902 (4334)
T ss_pred ceeee------------------ccccccc----ccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHH
Confidence 11111 0100000 0011122345679999999999999999999999999999999988
Q ss_pred hhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCC
Q 004860 390 AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG 467 (727)
Q Consensus 390 ~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~ 467 (727)
..++++++|+++++++++||.+++++|.+|+.|+++++++.. .++..+++.|+++++|++.++|++++.|+... .
T Consensus 3903 ~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~---~ 3979 (4334)
T PRK05691 3903 PYLALSEADVIAQTASQSFDISVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAED---R 3979 (4334)
T ss_pred HhcCCCccceEEEecCCchhHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhc---c
Confidence 899999999999999999999999999999999999998753 36789999999999999999999999987642 2
Q ss_pred CCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCC---CCccccccccCCCCceEEEECCCCC
Q 004860 468 LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL---QPQAFGAFSTATMTAGLVILDECGV 544 (727)
Q Consensus 468 ~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~vld~~~~ 544 (727)
..+++||.+++|||++++++.+.|.+..++++++|.||+||+++.++..... ......++|+|++|++++|+|++++
T Consensus 3980 ~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~v~d~~~~ 4059 (4334)
T PRK05691 3980 QALDGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGSYLPIGSPTDNNRLYLLDEALE 4059 (4334)
T ss_pred ccCCCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccccCCcCCCCCccCCCEEEEECCCCC
Confidence 3478999999999999999998888888889999999999999765543321 1223458999999999999999999
Q ss_pred cCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccC-CCceeeeeCceEEEecCceEEEEeecCCeeecC
Q 004860 545 PYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 618 (727)
Q Consensus 545 ~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~ 618 (727)
++|.|.. |||+| +.||+++ ++.|+++|..+|+. +|.|||||||+|||++||+|+|+||+|+|||++
T Consensus 4060 ~~p~g~~--GEL~i~G~~v~~GY~~~------~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~ 4131 (4334)
T PRK05691 4060 LVPLGAV--GELCVAGTGVGRGYVGD------PLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIR 4131 (4334)
T ss_pred CCCCCCc--eEEEEecccccccccCC------cccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEec
Confidence 9999985 99998 5777774 45899999999974 688999999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcC
Q 004860 619 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 698 (727)
Q Consensus 619 G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~ 698 (727)
|+||+++|||++|. .+|+|.+|+|+... ...+ +.++||++...+.. +...+.+.|+++|+++||+||+|+.|+.++
T Consensus 4132 G~riel~eIE~~l~-~~~~v~~a~v~~~~-~~~~-~~l~a~~~~~~~~~-~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~ 4207 (4334)
T PRK05691 4132 GYRIELGEIEARLH-EQAEVREAAVAVQE-GVNG-KHLVGYLVPHQTVL-AQGALLERIKQRLRAELPDYMVPLHWLWLD 4207 (4334)
T ss_pred eEEecHHHHHHHHH-hCCCccEEEEEEec-CCCC-cEEEEEEeCCcccc-cchHHHHHHHHHHHhhCChhhcCcceeecc
Confidence 99999999999995 99999998876654 3445 79999999876532 224566778889999999999999999999
Q ss_pred CCCCCCCchhhHHHHHHH
Q 004860 699 EFPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 699 ~lP~t~~GKvdR~~L~~~ 716 (727)
+||+|+||||||++|++.
T Consensus 4208 ~lP~t~~GKidr~~L~~~ 4225 (4334)
T PRK05691 4208 RLPLNANGKLDRKALPAL 4225 (4334)
T ss_pred cCCCCCCCcccHhhcCCC
Confidence 999999999999999875
No 12
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.5e-79 Score=704.56 Aligned_cols=606 Identities=27% Similarity=0.416 Sum_probs=480.4
Q ss_pred ccccCChhhhcccchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCC
Q 004860 84 LYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKH 163 (727)
Q Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 163 (727)
..|.|.+.....++|.-+.+..+.. |+..+.+|+.+++++++++..||..+++...+.|.+++..+++.. ..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~--~~~ 76 (655)
T PRK03584 4 PLWTPSAERIAASRMTAFIRWLAAR-----RGLSFDDYAALWRWSVEDLEAFWQSVWDFFGVIGSTPYTVVLAGR--RMP 76 (655)
T ss_pred CCCCCChhhcccchHHHHHHHHHHH-----hCCChHhHHHHHHHHHhCHHHHHHHHHHhcCceecCCCcEeecCC--CCC
Confidence 3677776655667776554443221 333345778899999999999999999987778999998887642 234
Q ss_pred CCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC
Q 004860 164 GGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM 242 (727)
Q Consensus 164 ~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~ 242 (727)
..+||.++..|++++++++ .+|+++|+++.+. .+..+++||+||.++++++|+.|+++ +++||+|+|+++|
T Consensus 77 ~~~wf~~~~~n~~~~~~~~-----~~~~~~Al~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n 148 (655)
T PRK03584 77 GARWFPGARLNYAENLLRH-----RRDDRPAIIFRGE---DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPN 148 (655)
T ss_pred CCeeCCCCEeeHHHHhhcc-----CCCCCeEEEEECC---CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC
Confidence 5799999999999999863 4689999998764 23456899999999999999999999 9999999999999
Q ss_pred CHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhh---hCCC--cEEEEcCC
Q 004860 243 TVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPL--KAIVLPAI 317 (727)
Q Consensus 243 s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~~--~~~v~~~~ 317 (727)
++++++++|||+++|++++|++|.++.+++.+++++++++++|+++...++++.++....+.+ ..+. .++++...
T Consensus 149 ~~e~v~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 228 (655)
T PRK03584 149 IPETVVAMLATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYL 228 (655)
T ss_pred CHHHHHHHHHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecC
Confidence 999999999999999999999999999999999999999999999877666665555444432 2222 34444322
Q ss_pred CCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHH-HHHHhhchhcCCCC
Q 004860 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDLKV 396 (727)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~~~~~~~~~~~~~~ 396 (727)
..............|++++..... .........+++++||+|||||||+||||+++|++++ +.+......+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 304 (655)
T PRK03584 229 GPAAAAAALPGALLWEDFLAPAEA----AELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGP 304 (655)
T ss_pred CCcccccccCCcccHHHHhhcccc----CCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCC
Confidence 211111112234567777652211 1122234567999999999999999999999999875 44555566788999
Q ss_pred CCEEEEecccccccchHHhHHhhhcCcEEEEecCC---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCcc
Q 004860 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWT 471 (727)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~ 471 (727)
+|+++++++++|+++.+ ++++|+.|++++++++. +++..++++|+++++|++.++|++++.|..... ....+++
T Consensus 305 ~d~~~~~~~~~~~~~~~-~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~ 383 (655)
T PRK03584 305 GDRFFWYTTCGWMMWNW-LVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLS 383 (655)
T ss_pred CCEEEEcCCchHHhHHH-HHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChh
Confidence 99999999999986543 67899999999998753 467899999999999999999999999986532 2346789
Q ss_pred ceeEEEeecCCCChhhHHHHHhhCC-CCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCC
Q 004860 472 KIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQ 550 (727)
Q Consensus 472 ~Lr~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~ 550 (727)
+||.+++|||++++++.+++.+.++ ++.+++.||+||++..+.......+...+++|.|++|++++|+|++|+++ .|+
T Consensus 384 sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd~~g~~~-~g~ 462 (655)
T PRK03584 384 ALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDICSCFVGGNPLLPVYRGEIQCRGLGMAVEAWDEDGRPV-VGE 462 (655)
T ss_pred heEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhhcccccCCCCCCcCCCccCCCcCCceeEEECCCCCCC-CCC
Confidence 9999999999999999999988763 57899999999987654433333445567899999999999999999999 677
Q ss_pred CeeeeEEEecccCCCCcccccccc-c---cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHH
Q 004860 551 PCVGEVGLFPLYLGASDRLLNADH-E---EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 626 (727)
Q Consensus 551 ~giGel~v~~~y~~~~~~~~~~~~-~---~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~e 626 (727)
. |||+|...+.+...+|++... + +.+|... +| ||+|||+|++|+||+++|+||+||+||++|+||+|.|
T Consensus 463 ~--GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~---~g--~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~E 535 (655)
T PRK03584 463 V--GELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTF---PG--VWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAE 535 (655)
T ss_pred c--eEEEEccCCCCCcceeeCCCccchHHHhhhccC---CC--EeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHH
Confidence 5 999994322222222333222 1 1233222 23 8899999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCc
Q 004860 627 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN 706 (727)
Q Consensus 627 IE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~G 706 (727)
||++|. +||+|.+|+|++.+++..+ +.+++||+++++...+ +++.+.|+++++++|++|++|..|+++++||+|+||
T Consensus 536 IE~~l~-~~p~V~ea~vvg~~~~~~g-~~~~a~vv~~~~~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~v~~lP~t~sG 612 (655)
T PRK03584 536 IYRQVE-ALPEVLDSLVIGQEWPDGD-VRMPLFVVLAEGVTLD-DALRARIRTTIRTNLSPRHVPDKIIAVPDIPRTLSG 612 (655)
T ss_pred HHHHHH-hCCCcceEEEEeeEcCCCC-EEEEEEEEECCCCCCc-HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCCCc
Confidence 999996 9999999999999998777 9999999998875544 566778888999999999999999999999999999
Q ss_pred hhhHHHHHHHHhhh
Q 004860 707 KLLRRVLRDQIKHE 720 (727)
Q Consensus 707 KvdR~~L~~~~~~~ 720 (727)
||+|+.|++++.+.
T Consensus 613 Ki~r~~lr~~~~~~ 626 (655)
T PRK03584 613 KKVELPVKKLLHGR 626 (655)
T ss_pred cchHHHHHHHHcCC
Confidence 99999999988654
No 13
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.9e-79 Score=703.48 Aligned_cols=579 Identities=27% Similarity=0.441 Sum_probs=469.9
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCCCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEe
Q 004860 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (727)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (727)
.+|+.+++++++++..||..+.+. ...|.+++.++++.. .....+||.++..|.+++++++++ +.+||++|+++.
T Consensus 5 ~~y~~~~~~s~~~~~~fw~~~~~~-~~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 79 (625)
T TIGR02188 5 EQYKELYEESIEDPDKFWAKLARE-LLDWFKPFTKVLDWS--FPPFYKWFVGGELNVSYNCVDRHL--EARPDKVAIIWE 79 (625)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh-cCceecCCceeecCC--CCCCCeeCCCCEEEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 467889999999999999999987 357999999987643 235689999999999999998765 679999999986
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHH
Q 004860 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (727)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~ 277 (727)
++ +.+..+++||+||.++++++|+.|+++ +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 80 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~i~~~~~~~~l~~~l~ 157 (625)
T TIGR02188 80 GD--EPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGAIHSVVFGGFSAEALADRIN 157 (625)
T ss_pred cC--CCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHH
Confidence 54 123456899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEEeecccccCCccccchHHHhhh---CC---CcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCc
Q 004860 278 VSKAKGIFTQDFILRGGRKFPLYSKVLGA---AP---LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (727)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (727)
+++++++|+++...++++.++....+.+. .+ ..++++......... .......|++++..... .....
T Consensus 158 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~ 231 (625)
T TIGR02188 158 DAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGNPVPW-VEGRDVWWHDLMAKASA-----YCEPE 231 (625)
T ss_pred hcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCCCcCc-cccccccHHHHHhhcCC-----CCCce
Confidence 99999999998877666665554443322 22 123333322211110 01123456666544221 12233
Q ss_pred cCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHH-HhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEEec
Q 004860 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT-AEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (727)
Q Consensus 352 ~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~-~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~ 429 (727)
...+++++||+|||||||+||||+++|++++... ......++++++|++++.++++|..+. +.++.+|+.|+++++++
T Consensus 232 ~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~t~vl~~ 311 (625)
T TIGR02188 232 PMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVGWITGHSYIVYGPLANGATTVMFE 311 (625)
T ss_pred ecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCchhhhccHHHHHHHHHcCCeEEEEC
Confidence 4567999999999999999999999999976543 334446789999999999999999886 56889999999999987
Q ss_pred CC---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhCC--CCcccc
Q 004860 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIE 502 (727)
Q Consensus 430 ~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~--~~~l~n 502 (727)
+. +++..+++.|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.++ +++++|
T Consensus 312 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~ 391 (625)
T TIGR02188 312 GTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVD 391 (625)
T ss_pred CCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCCCCHHHHHHHHHHcCCCCCceEe
Confidence 53 367899999999999999999999999987643 23456899999999999999999999888765 378999
Q ss_pred cccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCC-CCCCeeeeEEEecccCCCCccccccc-cccc-c
Q 004860 503 SCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGLFPLYLGASDRLLNAD-HEEV-Y 578 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p-~G~~giGel~v~~~y~~~~~~~~~~~-~~~~-~ 578 (727)
.||+||+++.++..... .+...+++|+|++|++++|+|++|++++ .|+. |||++...+.+...+|+++. .+.. +
T Consensus 392 ~yG~TE~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~g~~~~~~g~~--GeL~v~~p~p~~~~gy~~~~~~~~~~~ 469 (625)
T TIGR02188 392 TWWQTETGGIMITPLPGATPTKPGSATLPFFGIEPAVVDEEGNPVEGPGEG--GYLVIKQPWPGMLRTIYGDHERFVDTY 469 (625)
T ss_pred cccccccCCceeecCCCCCCcCCCcccCCcCCceEEEECCCCCCCCCCCCe--EEEEEccCCCcccccccCChHHHHHHH
Confidence 99999998765443322 2345678999999999999999999999 8885 99999543322222333332 2222 2
Q ss_pred ccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEE
Q 004860 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (727)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a 658 (727)
|.. .+| ||+|||+|++|+||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++.+++..| +.+++
T Consensus 470 ~~~---~~g--~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~~~~~g-~~~~a 542 (625)
T TIGR02188 470 FSP---FPG--YYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIESALV-SHPAVAEAAVVGIPDDIKG-QAIYA 542 (625)
T ss_pred hcc---CCC--EEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEE
Confidence 221 123 9999999999999999999999999999999999999999996 8999999999999998888 99999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 659 FVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 659 ~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
||+++++...+ +++.+.|+++++++|++|++|+.|+++++||+|+|||++|+.|++++.+.
T Consensus 543 ~vv~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~~~ 603 (625)
T TIGR02188 543 FVTLKDGYEPD-DELRKELRKHVRKEIGPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAAGE 603 (625)
T ss_pred EEEeCCCCCCC-HHHHHHHHHHHHhhcCCCccCcEEEECCCCCCCCCccchHHHHHHHHcCC
Confidence 99998876544 45677788899999999999999999999999999999999999998765
No 14
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=9e-79 Score=700.20 Aligned_cols=606 Identities=26% Similarity=0.378 Sum_probs=478.9
Q ss_pred CccccCChhhhcccchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCC
Q 004860 83 PLYWFPSLDQSKLTNLGNALEIHGPKLLGRAYKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSK 162 (727)
Q Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~ 162 (727)
+.+|.|.......+++..+.+..+.. |...+.+|+.+++++++++..||..+++...+.|..++.++++... .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~s~~~~~~fw~~~~~~~~~~~~~~~~~~~~~~~--~ 76 (652)
T TIGR01217 4 QPLWQPDAQRIAQARMTRFQAWAGEH-----HGAAEGGYDALHRWSVDELDTFWKAVWEWFDVRFSTPCARVVDDRT--M 76 (652)
T ss_pred CCCCCCChhhcccchHHHHHHHHHHh-----hCCChhhHHHHHHHHHhCHHHHHHHHHHhCCcceeCCCceeeeCCC--C
Confidence 45788877666677776665444322 3334467899999999999999999999877899999999986522 3
Q ss_pred CCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcC
Q 004860 163 HGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMP 241 (727)
Q Consensus 163 ~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~ 241 (727)
...+||.++..|.++++++. .++++|+++.+. .+..+++||+||.++++++|+.|+++ +++||+|+|+++
T Consensus 77 ~~~~wf~~~~~n~~~~~~~~------~~~~~a~~~~~~---~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~ 147 (652)
T TIGR01217 77 PGAQWFPGARLNYAENLLRA------AGTEPALLYVDE---THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLP 147 (652)
T ss_pred CCCEECCCCeeeHHHHHhcc------CCCCeEEEEECC---CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Confidence 45789999999999999873 358999999754 23456899999999999999999999 999999999999
Q ss_pred CCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhh---hCC--CcEEEEcC
Q 004860 242 MTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAP--LKAIVLPA 316 (727)
Q Consensus 242 ~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~--~~~~v~~~ 316 (727)
|++++++++|||+++|++++|++|.++.+++.+++++++++++|+++...++++..+....+.+ .++ ..++++..
T Consensus 148 n~~e~~~~~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~ 227 (652)
T TIGR01217 148 NIPQAVVAMLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPY 227 (652)
T ss_pred CCHHHHHHHHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeC
Confidence 9999999999999999999999999999999999999999999999887777766655554433 222 22344432
Q ss_pred CCCCC-CCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHH-HHHHhhchhcCC
Q 004860 317 IGNDV-GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-RCTAEGWAHIDL 394 (727)
Q Consensus 317 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~~~~~~~~~~~~ 394 (727)
..... ......+..+|+++...... .........++++++|+|||||||.||||+++|++++ +........+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~ 303 (652)
T TIGR01217 228 LGPRETEAPKIDGALDLEDFTAAAQA----AELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDL 303 (652)
T ss_pred CCCcccccccccCcccHHHHHhcccC----CCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCC
Confidence 21100 00001234567777544211 1112233456899999999999999999999999965 445555556889
Q ss_pred CCCCEEEEecccccccchHHhHHhhhcCcEEEEecCC---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCC
Q 004860 395 KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLD 469 (727)
Q Consensus 395 ~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~ 469 (727)
+++|+++++++++|+++.+ ++.+|+.|++++++++. +++..++++|+++++|++.++|++++.+..... ....+
T Consensus 304 ~~~d~~~~~~~~~~~~~~~-~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~ 382 (652)
T TIGR01217 304 GPGDRLFYYTTTGWMMWNW-LVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHD 382 (652)
T ss_pred CCCcEEEEeCCcchhhhHH-HHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCC
Confidence 9999999999999986544 56899999999999753 367789999999999999999998888765421 23567
Q ss_pred ccceeEEEeecCCCChhhHHHHHhhCC-CCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCC
Q 004860 470 WTKIRSFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPD 548 (727)
Q Consensus 470 l~~Lr~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~ 548 (727)
+++||.+++|||+++++..+++.+.++ +..+.+.||+||++.++....+..+...+++|.|.+|++++|+|++|++++
T Consensus 383 l~sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd~~g~~~~- 461 (652)
T TIGR01217 383 LSALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDICSCFAGANPTLPVHIGEIQAPGLGTAVQSWDPEGKPVT- 461 (652)
T ss_pred hhheeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHHhccccCCCCCCCCcCCccCCCcCCCceEEECCCCCCCC-
Confidence 899999999999999999998887664 346789999999865444333334445678899999999999999999995
Q ss_pred CCCeeeeEEEecccCCCCcccccccc-c---cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeech
Q 004860 549 DQPCVGEVGLFPLYLGASDRLLNADH-E---EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 624 (727)
Q Consensus 549 G~~giGel~v~~~y~~~~~~~~~~~~-~---~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~ 624 (727)
|+. |||++...+.+.+.+|+++.. + +.+|... +| ||+|||+|++|+||+++|+||+||+||++|+||+|
T Consensus 462 g~~--GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~---~g--~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p 534 (652)
T TIGR01217 462 GEV--GELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTY---PG--VWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGS 534 (652)
T ss_pred CCc--cEEEEecCCCccccceeCCCccchhHHhhhcCC---CC--EEEcCCcEEECCCCcEEEEecccCeEecCCEEcCH
Confidence 775 999994332222223333322 2 1233321 23 88999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCC
Q 004860 625 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 704 (727)
Q Consensus 625 ~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~ 704 (727)
.|||++|. +||+|.+|+|++++++..+ +.+++||+++++...+ +++.+.|+++++++|++|++|+.|+++++||+|+
T Consensus 535 ~EIE~~l~-~~p~V~eaavvg~~~~~~g-e~~~afVv~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~lP~T~ 611 (652)
T TIGR01217 535 AEIYNAVE-RLDEVRESLCIGQEQPDGG-YRVVLFVHLAPGATLD-DALLDRIKRTIRAGLSPRHVPDEIIEVPGIPHTL 611 (652)
T ss_pred HHHHHHHH-hCCCcceEEEEeeecCCCC-EEEEEEEEECCCCCCC-HHHHHHHHHHHHhhCCCCcCCCEEEECCCCCCCC
Confidence 99999996 9999999999999998888 9999999998876554 5677788889999999999999999999999999
Q ss_pred CchhhHHHHHHHHhhh
Q 004860 705 SNKLLRRVLRDQIKHE 720 (727)
Q Consensus 705 ~GKvdR~~L~~~~~~~ 720 (727)
||||+|+.|++++.+.
T Consensus 612 sGKi~r~~Lr~~~~~~ 627 (652)
T TIGR01217 612 TGKRVEVAVKRVLQGT 627 (652)
T ss_pred CccChHHHHHHHHcCC
Confidence 9999999999998543
No 15
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=4.5e-82 Score=786.91 Aligned_cols=638 Identities=19% Similarity=0.184 Sum_probs=497.4
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC---Ccccc
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP---PLYWF 87 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~---~~~~~ 87 (727)
|++-+++......+|.+.++++.+. .++++||+|||++ |++.++..+ ...|+ |+++|++++..... .....
T Consensus 295 ntlplr~~~~~~~tf~~~l~~~~~~~~~~~~h~~~p~~~-i~~~l~~~~--~~~~l--f~~~~~~~~~~~~~~~~~~~~~ 369 (1296)
T PRK10252 295 NVLPLRVHIAAQETLPELATRLAAQLKKMRRHQRYDAEQ-IVRDSGRAA--GDEPL--FGPVLNIKVFDYQLDFPGVQAQ 369 (1296)
T ss_pred ceEEEEEecCCCCCHHHHHHHHHHHHHHHHhhcCCCHHH-HHHHhcCcc--CCCCc--eeEEEEeeecccccCcCCccce
Confidence 4556677767777888888888877 9999999999999 999997432 34455 77887776533211 10000
Q ss_pred -CChhhhcccchHHHHH-HhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCCCCCC
Q 004860 88 -PSLDQSKLTNLGNALE-IHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKSK 162 (727)
Q Consensus 88 -~~~~~~~~~~l~~~~~-~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~~ 162 (727)
........+|+++.+. ..++++...+ |++ ++|++.+++++.++|..+|+++...++.+...+ +...+...
T Consensus 370 ~~~~~~~~~~dl~l~~~~~~~~~l~~~~~y~~-----~~f~~~~i~~l~~~~~~ll~~~~~~p~~~i~~~~~~~~~~~~~ 444 (1296)
T PRK10252 370 THTLATGPVNDLELALFPDEHGGLSIEILANP-----QRYDEATLIAHAERLKALIAQFAADPALLCGDVDILLPGEYAQ 444 (1296)
T ss_pred eeecCCCccCCeEEEEEECCCCcEEEEEEECh-----hhCCHHHHHHHHHHHHHHHHHHHhCCCCChhhcCCCCHHHHHH
Confidence 0001112346666654 2345666677 888 999999999999999999999988777766553 22222111
Q ss_pred CCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 004860 163 HGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAID 239 (727)
Q Consensus 163 ~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~ 239 (727)
+..|+........ .++.. ..+++++||++|+++.+. .+||+||+++++++|+.|.+. +++||+|+|+
T Consensus 445 -~~~~~~~~~~~~~-~~l~~~~~~~~~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~ 514 (1296)
T PRK10252 445 -LAQVNATAVEIPE-TTLSALVAQQAAKTPDAPALADARY--------QFSYREMREQVVALANLLRERGVKPGDSVAVA 514 (1296)
T ss_pred -HHHhcCCCCCCCc-CCHHHHHHHHHHhCCCCeEEEcCCC--------cEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 3344433322211 11211 224578999999999877 899999999999999999999 9999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCC
Q 004860 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (727)
Q Consensus 240 ~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 319 (727)
++|++++++++|||+++|++|+|+||++|.+++.+++++++++++|+++......... +. ..++
T Consensus 515 ~~~~~~~i~~~la~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----------~~-~~~~----- 578 (1296)
T PRK10252 515 LPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----------PD-LTSL----- 578 (1296)
T ss_pred eCCCHHHHHHHHHHHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----------CC-ceee-----
Confidence 9999999999999999999999999999999999999999999999987532111100 00 0000
Q ss_pred CCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCE
Q 004860 320 DVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDV 399 (727)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~ 399 (727)
.+........ ..+.....+++++||+|||||||+||||+++|+++++.+.+....++++++|+
T Consensus 579 -----------~~~~~~~~~~------~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~ 641 (1296)
T PRK10252 579 -----------CYNAPLAPQG------AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDV 641 (1296)
T ss_pred -----------eccccccccc------CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCE
Confidence 0000000000 01111235789999999999999999999999999999999999999999999
Q ss_pred EEEecccccccchHHhHHhhhcCcEEEEecC--CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCC--CCCccceeE
Q 004860 400 YCWPTNLGWVMGPVILFSSFLNGATLALYQG--SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRS 475 (727)
Q Consensus 400 ~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~--~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~Lr~ 475 (727)
+++.+|++|+.+++++|.+|++|+++++.+. ..++..++++|+++++|++.++|++++.+++..... ...+++||.
T Consensus 642 ~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~ 721 (1296)
T PRK10252 642 VLQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQ 721 (1296)
T ss_pred EEEeCCcchhhhHHHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccE
Confidence 9999999999999999999999999999764 347888999999999999999999999988753222 234679999
Q ss_pred EEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCC------CccccccccCCCCceEEEECCCCCcCCCC
Q 004860 476 FASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQAFGAFSTATMTAGLVILDECGVPYPDD 549 (727)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~~~~~iG~p~~~~~~~vld~~~~~~p~G 549 (727)
+++|||++++++.+.+.+.+ +++++|.||+||+++.++...... .....++|+|++|++++|+|++++++|.|
T Consensus 722 i~~gGe~l~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~~~g 800 (1296)
T PRK10252 722 VFCSGEALPADLCREWQQLT-GAPLHNLYGPTEAAVDVSWYPAFGEELAAVRGSSVPIGYPVWNTGLRILDARMRPVPPG 800 (1296)
T ss_pred EEEecCCCCHHHHHHHHhcC-CCEEEeCCCcchhhheeeeeecccccccccCCCCCCcccccCCCEEEEECCCCCCCCCC
Confidence 99999999999988887654 678999999999987655433211 22346899999999999999999999999
Q ss_pred CCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeech
Q 004860 550 QPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSS 624 (727)
Q Consensus 550 ~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~ 624 (727)
+. |||+| +.||+++ ++.|++.|..+|+.+|.+||+|||+|++++||+++|+||+|+|||++|+||+|
T Consensus 801 ~~--Gel~i~g~~~~~GY~~~------~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~ 872 (1296)
T PRK10252 801 VA--GDLYLTGIQLAQGYLGR------PDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIEL 872 (1296)
T ss_pred Cc--eEEEecccccchhhCCC------cccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecH
Confidence 96 99988 4577764 45788899999988889999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCceeeEEEeec----CCCCC-ceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCC
Q 004860 625 VEIERVCDQADESILETAAISVS----PAGGG-PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPE 699 (727)
Q Consensus 625 ~eIE~~l~~~~p~V~~a~vv~~~----~~~~~-~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~ 699 (727)
.|||++|. .||+|.+++|++.. +...+ ...+++||+...+...+.++++ ++++++||+||+|..++.+++
T Consensus 873 ~eIE~~l~-~~~~v~~a~v~~~~~~~~~~~~~~~~~lva~v~~~~~~~~~~~~l~----~~l~~~Lp~~~~P~~~~~~~~ 947 (1296)
T PRK10252 873 GEIDRAMQ-ALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSGLPLDTSALQ----AQLRERLPPHMVPVVLLQLDQ 947 (1296)
T ss_pred HHHHHHHH-hCccccceEEEEEeccccccCCCCccEEEEEEEcCCCCCCCHHHHH----HHHHhhCchhcCCcEEEEecC
Confidence 99999996 89999999877652 11122 1479999998876555545544 457789999999999999999
Q ss_pred CCCCCCchhhHHHHHHH
Q 004860 700 FPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 700 lP~t~~GKvdR~~L~~~ 716 (727)
||+|+||||||++|++.
T Consensus 948 lP~t~~GKidr~~L~~~ 964 (1296)
T PRK10252 948 LPLSANGKLDRKALPLP 964 (1296)
T ss_pred CCCCCCcChhHHhcCCC
Confidence 99999999999999764
No 16
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-78 Score=653.33 Aligned_cols=588 Identities=32% Similarity=0.457 Sum_probs=497.3
Q ss_pred cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCCCCCcCCCCcccHhhhhccCCCCCCCCCCce
Q 004860 114 YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTV 193 (727)
Q Consensus 114 y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~ 193 (727)
|.....+|..|++.+++.++.||..+++.+....... .............+|+.+...|.+++|++++.... .+|++
T Consensus 6 ~~~~~~~y~~~~~~s~~~~~~fw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~w~~g~~ln~~~n~~~~~~~~~-~~~~~ 82 (626)
T KOG1175|consen 6 YKNSLSSYREFYRFSVEDPERFWGEVAKELHWKFPWP--RCNKDENKGNPFTKWFPGAFLNACYNCLDRHIKEK-GGDKV 82 (626)
T ss_pred cCCCHHHHHHHHhhcccCHHHHHHHhhhhhhcccCcc--ccccccccCCCCccccccchhhhhHhhhhhhhhhc-CCCCc
Confidence 5566678899999999999999999999864322222 22222223456789999999999999999976445 79999
Q ss_pred EEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHH
Q 004860 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (727)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l 272 (727)
|+++.+..+ +....+||.||.+++.++|..|.+. +++||+|++++|+.+++++++|||.++|++.+++...+++..+
T Consensus 83 a~~~~~~~~--~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~fs~~~l 160 (626)
T KOG1175|consen 83 AIIFEGNEG--GDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAGFSAKEL 160 (626)
T ss_pred EEEEEecCC--CceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeeccCCHHHH
Confidence 999986632 2333499999999999999999988 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCcc
Q 004860 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (727)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (727)
..+++++++++|+|.+...+..+.++......+.+.....+........-......+.+|++.+..... ..++..
T Consensus 161 ~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a~~-----~~~~~~ 235 (626)
T KOG1175|consen 161 LDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKASP-----EHPCVP 235 (626)
T ss_pred HHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhcCC-----CCCcee
Confidence 999999999999999999999999988877776654322111111110111112236678887666543 233677
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChH-HHHHHHhhchhcCCCCCCEEEEecccccccchHH-hHHhhhcCcEEEEecC
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLS-SIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQG 430 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~-l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~lv~~~~ 430 (727)
.+.+|+.+|+|||||||.|||+.+++.+ ++..+......++++++|++++++.++|+.+.+. .+++|++|+|++++++
T Consensus 236 ~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g 315 (626)
T KOG1175|consen 236 VKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEG 315 (626)
T ss_pred cCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcC
Confidence 7889999999999999999999999987 5667777778899999999999999999999854 7889999999999988
Q ss_pred CC-ChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC--CCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccccc
Q 004860 431 SP-LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (727)
Q Consensus 431 ~~-~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (727)
.+ ++..+++.+.+++||++++.|++++.|.+.... ...++++||.+.++||++.++..+|+.+.+...+|++.||+|
T Consensus 316 ~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~qt 395 (626)
T KOG1175|consen 316 PPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQT 395 (626)
T ss_pred CCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCcchHHHHHHhcCccchhhceeee
Confidence 77 889999999999999999999999988776443 334456899999999999999999999988655799999999
Q ss_pred ccccccccCCCCC-CccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccC-CCCcccccccc--ccccccccc
Q 004860 508 ELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYL-GASDRLLNADH--EEVYFRGMP 583 (727)
Q Consensus 508 E~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~-~~~~~~~~~~~--~~~~f~~~p 583 (727)
|+|..++.+.... +..++++|.|.+++.+.|+|++|++++.+. |.|+|++.+..+ +.+..++++.. .+.||.+.|
T Consensus 396 EtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~de~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~p 474 (626)
T KOG1175|consen 396 ETGGICITPKPGKLPIKPGSAGKPFPGYDVQILDENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKKFP 474 (626)
T ss_pred ccCceeeeccCCCCCcCccccCCCCCCcceEEECCCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhcccCC
Confidence 9999888877766 888999999999999999999999999875 569999976666 55555555433 334554443
Q ss_pred cCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEec
Q 004860 584 MYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLK 663 (727)
Q Consensus 584 ~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~ 663 (727)
.+|.|||.+++|+||+++++||.||+||++|+|+++.|||+++. .||.|.|++||+.+++..| +.++|||+++
T Consensus 475 -----g~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~-~hp~VaEsAvVg~p~~~~g-e~v~aFvvl~ 547 (626)
T KOG1175|consen 475 -----GYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALV-EHPAVAESAVVGSPDPIKG-EVVLAFVVLK 547 (626)
T ss_pred -----ceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHh-hCcchhheeeecCCCCCCC-eEEEEEEEEc
Confidence 38999999999999999999999999999999999999999996 9999999999999999988 9999999999
Q ss_pred CCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 664 KGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 664 ~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
++ ..+.++|++.|++++++.+.+++.|+.|++++.||+|.|||+.|++|++++.++
T Consensus 548 ~g-~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrSGKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 548 SG-SHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRSGKIMRRALRKIASGK 603 (626)
T ss_pred CC-CCChHHHHHHHHHHHHhhcCcccccceeEecCCCCccccchhHHHHHHHHhccC
Confidence 98 456699999999999999999999999999999999999999999999999876
No 17
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=2.2e-81 Score=839.43 Aligned_cols=650 Identities=15% Similarity=0.153 Sum_probs=518.9
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC-----Ccc
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP-----PLY 85 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~-----~~~ 85 (727)
|++-+++..+...+|.++++++.++ +++++||++||++ |++.|+++|....+|+ ||+|+++++..... ...
T Consensus 2019 ntlPlrv~~~~~~t~~~ll~~v~~~~~~~~~hq~~p~~~-iv~~l~~~r~~~~~pl--f~~~~~~~~~~~~~~~~~~~~~ 2095 (4334)
T PRK05691 2019 NTQVLRCQLDGQMSVSELLEQVRQTVIEGQSHQDLPFDH-LVEALQPPRSAAYNPL--FQVMCNVQRWEFQQSRQLAGMT 2095 (4334)
T ss_pred eeeeEEeecCCCCCHHHHHHHHHHHHHHHHhcccCCHHH-HHHHhccccccCCCCc--eEEEEEeeccccccccCCCCce
Confidence 4566788888888888888888888 9999999999999 9999999999889998 99999987643211 111
Q ss_pred --ccCChhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCCCC
Q 004860 86 --WFPSLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDK 160 (727)
Q Consensus 86 --~~~~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~ 160 (727)
.........+|||.+.+.+.++++.+.+ |+. ++|++++++++.++|.++|+++...++.+...+ +...+.
T Consensus 2096 ~~~~~~~~~~~~~dL~l~v~~~~~~l~l~~~y~~-----~lf~~~~i~~l~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~ 2170 (4334)
T PRK05691 2096 VEYLVNDARATKFDLNLEVTDLDGRLGCCLTYSR-----DLFDEPRIARMAEHWQNLLEALLGDPQQRLAELPLLAAAEQ 2170 (4334)
T ss_pred eEeecccCCccccceEEEEEecCCcEEEEEEECc-----ccCCHHHHHHHHHHHHHHHHHHHhhhcCChhhccCCcHHHH
Confidence 1122234578899888887777888888 998 999999999999999999999987777766553 333322
Q ss_pred CCCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEE
Q 004860 161 SKHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIA 237 (727)
Q Consensus 161 ~~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Va 237 (727)
......|+..........+++. ..+++++||++|+++.++ ++||+||+++++++|++|++. +++|++|+
T Consensus 2171 ~~l~~~~~~~~~~~~~~~~l~~~~~~~a~~~p~~~Av~~~~~--------~lTY~eL~~~~~~lA~~L~~~Gv~~g~~V~ 2242 (4334)
T PRK05691 2171 QQLLDSLAGEAGEARLDQTLHGLFAAQAARTPQAPALTFAGQ--------TLSYAELDARANRLARALRERGVGPQVRVG 2242 (4334)
T ss_pred HHHHHHhCCCCcCCCcccchHHHHHHHHHHCCCCeEEEeCCe--------EEcHHHHHHHHHHHHHHHHHcCCCCCCEEE
Confidence 2222334433322222334443 335689999999999877 999999999999999999999 99999999
Q ss_pred EEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCC
Q 004860 238 IDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI 317 (727)
Q Consensus 238 i~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 317 (727)
++++|++++++++|||+|+|++||||||.+|.+++.+++++++++++|++..........+ . ....+.+...
T Consensus 2243 l~~~~s~~~vv~~lailkaG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~~------~--~~~~~~~~~~ 2314 (4334)
T PRK05691 2243 LALERSLEMVVGLLAILKAGGAYVPLDPEYPLERLHYMIEDSGIGLLLSDRALFEALGELP------A--GVARWCLEDD 2314 (4334)
T ss_pred EEeCCCHHHHHHHHHHHHhCcEeecCCCCChHHHHHHHHHhcCCCEEEeChhhhhhhcccc------c--cceeEEeccc
Confidence 9999999999999999999999999999999999999999999999999875321110000 0 0001111000
Q ss_pred CCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCC
Q 004860 318 GNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (727)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~ 397 (727)
.... .... .........+++++||+|||||||+||||+++|+++++.+.+....++++++
T Consensus 2315 --------------~~~~-~~~~-----~~~~~~~~~~~~~a~ii~TSGSTG~PKGV~~~h~~l~~~~~~~~~~~~~~~~ 2374 (4334)
T PRK05691 2315 --------------AAAL-AAYS-----DAPLPFLSLPQHQAYLIYTSGSTGKPKGVVVSHGEIAMHCQAVIERFGMRAD 2374 (4334)
T ss_pred --------------hhhh-hcCC-----CCCCCCCCCCCCcEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCcc
Confidence 0000 0000 0011122356899999999999999999999999999999888889999999
Q ss_pred CEEEEecccccccchHHhHHhhhcCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEE
Q 004860 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSF 476 (727)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i 476 (727)
|+++++++++|+.+++++|.+|++|+++++.+. ..++..++++|+++++|++.++|++++.|...... .....+||.+
T Consensus 2375 d~~l~~~~~~fd~~~~~i~~~L~~G~~lvl~~~~~~~~~~l~~~i~~~~vt~~~~tPs~~~~l~~~~~~-~~~~~~lr~i 2453 (4334)
T PRK05691 2375 DCELHFYSINFDAASERLLVPLLCGARVVLRAQGQWGAEEICQLIREQQVSILGFTPSYGSQLAQWLAG-QGEQLPVRMC 2453 (4334)
T ss_pred cEEEEecCccHHHHHHHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHHhhhc-cccCCCceEE
Confidence 999999999999999999999999999999764 34788999999999999999999999999865422 2345689999
Q ss_pred EeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCC----CCccccccccCCCCceEEEECCCCCcCCCCCCe
Q 004860 477 ASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPC 552 (727)
Q Consensus 477 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~----~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~g 552 (727)
++|||+++++..+++...++...++|.||+||++++.+.+... ......++|+|++++.++|+|++++++|.|++
T Consensus 2454 ~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~iG~pi~~~~~~i~d~~~~~vp~G~~- 2532 (4334)
T PRK05691 2454 ITGGEALTGEHLQRIRQAFAPQLFFNAYGPTETVVMPLACLAPEQLEEGAASVPIGRVVGARVAYILDADLALVPQGAT- 2532 (4334)
T ss_pred EEccccCCHHHHHHHHHhCCCceEEeCcCCCcceEEEEEeecccccccCCCCCccccccCCCEEEEECCCCCCCCCCCc-
Confidence 9999999999999988887777899999999998654332211 11223579999999999999999999999996
Q ss_pred eeeEEE-----ecccCCCCccccccccccccccccccC-CCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHH
Q 004860 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMY-KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVE 626 (727)
Q Consensus 553 iGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~e 626 (727)
|||+| +.||+++ ++.|++.|..+|+. .|.|||+|||+|++++||+++|+||+|+|||++|+||+|+|
T Consensus 2533 -GEL~i~G~~v~~GY~~~------~~~t~~~F~~~p~~~~~~r~y~TGDl~~~~~dG~l~~~GR~d~qvki~G~rIe~~E 2605 (4334)
T PRK05691 2533 -GELYVGGAGLAQGYHDR------PGLTAERFVADPFAADGGRLYRTGDLVRLRADGLVEYVGRIDHQVKIRGFRIELGE 2605 (4334)
T ss_pred -eEEEecccccCccccCC------hhhhhhhccCCCCCCCCCceEeccceEEEcCCCCEEEeecccCeEEeeeEEechHH
Confidence 99988 5677764 45788899988875 47789999999999999999999999999999999999999
Q ss_pred HHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCC--CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCC
Q 004860 627 IERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT--SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTA 704 (727)
Q Consensus 627 IE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~--~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~ 704 (727)
||++|. +||+|.+|+|++..++ .+ +.+++|++...... .....+.+.++++++++||+||+|..|+++++||+|+
T Consensus 2606 IE~~l~-~~p~V~~a~V~~~~~~-~~-~~lva~vv~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~v~~lP~t~ 2682 (4334)
T PRK05691 2606 IESRLL-EHPAVREAVVLALDTP-SG-KQLAGYLVSAVAGQDDEAQAALREALKAHLKQQLPDYMVPAHLILLDSLPLTA 2682 (4334)
T ss_pred HHHHHH-hCCCcceEEEEEeeCC-CC-cEEEEEEEecccccccccccccHHHHHHHHHhhCccccCChhheeecccCCCC
Confidence 999995 9999999999988543 44 78999999754221 1123345667788999999999999999999999999
Q ss_pred CchhhHHHHHHHH
Q 004860 705 SNKLLRRVLRDQI 717 (727)
Q Consensus 705 ~GKvdR~~L~~~~ 717 (727)
|||+||++|++..
T Consensus 2683 ~GKidr~~L~~~~ 2695 (4334)
T PRK05691 2683 NGKLDRRALPAPD 2695 (4334)
T ss_pred CCcccHHhhcCcc
Confidence 9999999998653
No 18
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-77 Score=691.31 Aligned_cols=578 Identities=27% Similarity=0.409 Sum_probs=461.8
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCCCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEe
Q 004860 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (727)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (727)
.+|..+.+++++++..||..+.+. ..|..++.++++. ..+..+||.++..|.++++++++. +++||++|+++.
T Consensus 17 ~~~~~~~~~~~~~~~~~w~~~~~~--~~~~~~~~~~~~~---~~~~~~w~~~~~~n~~~~~l~~~~--~~~p~~~Al~~~ 89 (637)
T PRK00174 17 EQYKALYQESVEDPEGFWAEQAKR--LDWFKPFDTVLDW---NAPFIKWFEDGELNVSYNCLDRHL--KTRGDKVAIIWE 89 (637)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHh--cCeecCCcccccC---CCCCCccCCCCEeEHHHHHHHHhh--ccCCCCeEEEEE
Confidence 456888899999999999999877 4688888888764 346789999999999999998765 678999999986
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHH
Q 004860 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (727)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~ 277 (727)
+.. .+..+++||+||+++++++|+.|+++ +++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 90 ~~~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~l~~~~~~~~l~~~l~ 167 (637)
T PRK00174 90 GDD--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAVHSVVFGGFSAEALADRII 167 (637)
T ss_pred CCC--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEecCCCCCHHHHHHHHH
Confidence 541 12346899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEEeecccccCCccccchHHHhhh---CCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCcc
Q 004860 278 VSKAKGIFTQDFILRGGRKFPLYSKVLGA---APL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (727)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (727)
+++++++|+++...+..+.++....+.+. .+. .++++......... .......|+++...... ..+...
T Consensus 168 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~ 241 (637)
T PRK00174 168 DAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVDW-VEGRDLWWHELVAGASD-----ECEPEP 241 (637)
T ss_pred hcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcCc-CCCCcccHHHHHhhcCC-----CCCccc
Confidence 99999999988766555554444433322 221 23333322111100 01123456666543211 122234
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH-hhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEEecC
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA-EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQG 430 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~-~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~ 430 (727)
..+++++||+|||||||+||||+++|++++.... .....++++++|++++.++++|..+. +.++.+|++|++++++++
T Consensus 242 ~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 321 (637)
T PRK00174 242 MDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGWVTGHSYIVYGPLANGATTLMFEG 321 (637)
T ss_pred cCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchHhhhhHHHHHHHHHcCCEEEEECC
Confidence 5678999999999999999999999999765443 34445788999999999999999887 568899999999999875
Q ss_pred C---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC--CCCCccceeEEEeecCCCChhhHHHHHhhCC--CCccccc
Q 004860 431 S---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAW--YNAIIES 503 (727)
Q Consensus 431 ~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~--~~~l~n~ 503 (727)
. +++..+++.|+++++|++.++|++++.|++.... ...++++||.+++|||+++++..+++.+.++ .++++|.
T Consensus 322 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~ 401 (637)
T PRK00174 322 VPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDT 401 (637)
T ss_pred CCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEec
Confidence 3 3678999999999999999999999999876432 3456889999999999999999988887764 3789999
Q ss_pred ccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCcccccc-ccccccccc
Q 004860 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNA-DHEEVYFRG 581 (727)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~-~~~~~~f~~ 581 (727)
||+||++..++..... .....+++|+|++|++++|+|++|+++|.|+. |||+|...+.+...+|+++ +.+...|
T Consensus 402 YG~TE~~~~~~~~~~~~~~~~~~~vG~p~~g~~~~i~d~~g~~~~~g~~--Gel~v~g~~p~~~~gy~~~~~~~~~~~-- 477 (637)
T PRK00174 402 WWQTETGGIMITPLPGATPLKPGSATRPLPGIQPAVVDEEGNPLEGGEG--GNLVIKDPWPGMMRTIYGDHERFVKTY-- 477 (637)
T ss_pred ccccccCCceEecCCCCCCcCCCcccCCCCCceEEEECCCCCCCCCCCc--EEEEEcCCCCcccccccCCHHHHHHhh--
Confidence 9999998755433221 22345789999999999999999999999986 9999853211222223332 2222221
Q ss_pred cccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEE
Q 004860 582 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVV 661 (727)
Q Consensus 582 ~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv 661 (727)
+.....||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+|+|++.+++..| +.+++||+
T Consensus 478 --~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~-~~~~V~~~~Vvg~~~~~~g-~~~~a~vv 553 (637)
T PRK00174 478 --FSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKVAEAAVVGRPDDIKG-QGIYAFVT 553 (637)
T ss_pred --hcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHHH-hCCCcceEEEEeeEcCCCC-eEEEEEEE
Confidence 1112238999999999999999999999999999999999999999996 9999999999999998888 99999999
Q ss_pred ecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 662 LKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 662 ~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+.++...+ +.+.+.|++++++.|++|++|..|+++++||+|+|||++|+.|++++.+.
T Consensus 554 ~~~~~~~~-~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GKi~R~~L~~~~~~~ 611 (637)
T PRK00174 554 LKGGEEPS-DELRKELRNWVRKEIGPIAKPDVIQFAPGLPKTRSGKIMRRILRKIAEGE 611 (637)
T ss_pred ECCCCCCC-HHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 98765443 45666788889999999999999999999999999999999999987655
No 19
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-77 Score=689.19 Aligned_cols=577 Identities=21% Similarity=0.321 Sum_probs=462.3
Q ss_pred CCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeeeecCCCCCCCCCCcCCCCcccHhhhhccCCCCCCCCCCceEEEEe
Q 004860 119 TSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCILDRTDKSKHGGTWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWR 198 (727)
Q Consensus 119 ~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~ 198 (727)
.+|+.+++++++++..||..+++. ..|++++.++++.. ..+..+||.++..|.++++++++. +.+||++|+++.
T Consensus 2 ~~~~~~~~~s~~~~~~fw~~~~~~--~~~~~~~~~~~~~~--~~~~~~wf~~~~~n~~~~~l~~~~--~~~p~~~A~~~~ 75 (629)
T PRK10524 2 MSYSEFYQRSIDDPEAFWAEQARR--IDWQTPFTQVLDYS--NPPFARWFVGGRTNLCHNAVDRHL--AKRPEQLALIAV 75 (629)
T ss_pred hhHHHHHHHHhcCHHHHHHHHHHh--CCcccCchhhccCC--CCCcCccCCCcEeeHHHHHHHHhh--ccCCCCeEEEEE
Confidence 467889999999999999999996 47999999987542 245679999999999999998765 678999999985
Q ss_pred cCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHH
Q 004860 199 EDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLR 277 (727)
Q Consensus 199 ~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~ 277 (727)
+. ..+..+++||+||.++++++|++|+++ +++||+|+++++|++++++++|||+++|++++|++|.++.+++.++++
T Consensus 76 ~~--~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v~~~~~~~~~~l~~~l~ 153 (629)
T PRK10524 76 ST--ETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAIHSVVFGGFASHSLAARID 153 (629)
T ss_pred cC--CCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEeeCCCCCHHHHHHHHH
Confidence 42 123346899999999999999999999 999999999999999999999999999999999999999999999999
Q ss_pred hcCeEEEEeecccccCCccccchHHHhhh---C---CCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCc
Q 004860 278 VSKAKGIFTQDFILRGGRKFPLYSKVLGA---A---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPV 351 (727)
Q Consensus 278 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~---~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (727)
+++++++|+++...++++.++....+.+. . ...++++...... .........+|.++...... ...+..
T Consensus 154 ~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~ 228 (629)
T PRK10524 154 DAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAP-MARVAGRDVDYATLRAQHLG----ARVPVE 228 (629)
T ss_pred hcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC-cCcccCCcccHHHHHhcCCC----CCCCce
Confidence 99999999988766666665544433321 1 2234444321110 01111233456665443221 111222
Q ss_pred cCCCCCeEEEEeCCCCCCCCCeEEecChHHHHH-HHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEEec
Q 004860 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRC-TAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (727)
Q Consensus 352 ~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~ 429 (727)
...+++++||+|||||||.||||+++|++++.. .......+++.++|++++.++++|+++. +.++.+|+.|+++++++
T Consensus 229 ~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~ 308 (629)
T PRK10524 229 WLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGWVVGHSYIVYAPLLAGMATIMYE 308 (629)
T ss_pred eeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCeeccchHHHHHHHhCCCEEEEEC
Confidence 346789999999999999999999999997543 3334445788999999999999999886 66899999999999987
Q ss_pred CC---CChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 430 GS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 430 ~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+. +++..++++|+++++|++.++|++++.|.+... ....++++||.+++|||++++++.+++.+.+ +++++|.|
T Consensus 309 g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~l~~~~~~~~~~~~-~~~v~~~Y 387 (629)
T PRK10524 309 GLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEPLDEPTASWISEAL-GVPVIDNY 387 (629)
T ss_pred CCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCCCCHHHHHHHHHhc-CCCeEecc
Confidence 53 367889999999999999999999999887542 2345789999999999999999998888766 57899999
Q ss_pred cccccccccccCCC---CCCccccccccCCCCceEEEECC-CCCcCCCCCCeeeeEEEec----ccCCCCcccccc-ccc
Q 004860 505 GGTELSSAYIQGSL---LQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLFP----LYLGASDRLLNA-DHE 575 (727)
Q Consensus 505 G~TE~~~~~~~~~~---~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v~~----~y~~~~~~~~~~-~~~ 575 (727)
|+||++..++.... ......+++|+|++|++++|+|+ +|+++|.|+. |||++.. +++. .++++ +.+
T Consensus 388 G~TE~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~g~~~~~g~~--Gel~i~gp~~~~~~~---~~~~~~~~~ 462 (629)
T PRK10524 388 WQTETGWPILAIARGVEDRPTRLGSPGVPMYGYNVKLLNEVTGEPCGPNEK--GVLVIEGPLPPGCMQ---TVWGDDDRF 462 (629)
T ss_pred ccccccchhhcCCCCcccCcCCCCCcccCcCCceEEEEeCCCCCCCCCCCc--EEEEEcCCCChhhcC---CccCChHHH
Confidence 99999843332222 12334578999999999999998 9999999986 9999943 3333 22222 222
Q ss_pred -cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCce
Q 004860 576 -EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (727)
Q Consensus 576 -~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~ 654 (727)
+.+|... +.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. +||+|.+++|++.+++..| +
T Consensus 463 ~~~~~~~~----~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~-~~p~V~e~~vvg~~d~~~g-~ 536 (629)
T PRK10524 463 VKTYWSLF----GRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESIS-SHPAVAEVAVVGVKDALKG-Q 536 (629)
T ss_pred HHhhhccC----CCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHH-hCCCcceEEEEccccCCCC-e
Confidence 2233211 3359999999999999999999999999999999999999999996 9999999999999998887 8
Q ss_pred EEEEEEEecCCCCCC----hHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 655 VLVIFVVLKKGFTSQ----PDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 655 ~l~a~vv~~~~~~~~----~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
.+++||+++++...+ .+.+.+.|+++++++|++|++|..|+++++||+|+|||++|+.|++++.+.
T Consensus 537 ~~~~~vv~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 606 (629)
T PRK10524 537 VAVAFVVPKDSDSLADREARLALEKEIMALVDSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAEGR 606 (629)
T ss_pred EEEEEEEECCCCccccccchHHHHHHHHHHHHhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHcCC
Confidence 999999998754322 246777889999999999999999999999999999999999999987654
No 20
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=9.9e-76 Score=634.86 Aligned_cols=497 Identities=27% Similarity=0.298 Sum_probs=418.8
Q ss_pred CCCCc-eEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh---cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 188 KEDNT-VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM---FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 188 ~~pd~-~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~---v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
..+++ +++++.... .+.+||+|+..++.++|.+|.++ +++||+|+|++||+++++++++||+.+|+++.|+
T Consensus 28 ~~~~~~~~~i~~~~~-----g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~ 102 (537)
T KOG1176|consen 28 VYLDRNTSLVYQDSD-----GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPL 102 (537)
T ss_pred ccccCcceEEEecCC-----CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcccccc
Confidence 44444 788877620 13999999999999999999975 7889999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCccc-HHHHhcccCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLS-WKDFLSSVDYH 342 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 342 (727)
+|.+.+.++.+.++++++++++++.... +........+..+++++................+ +..+......
T Consensus 103 Np~~~~~ei~~~~~~s~~kiif~d~~~~------~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 175 (537)
T KOG1176|consen 103 NPRLTASEIAKQLKDSKPKLIFVDEDFY------DKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLP- 175 (537)
T ss_pred CcccCHHHHHHHHHhcCCeEEEEcCchH------HHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCC-
Confidence 9999999999999999999999998543 3333333333455555543311111111111112 3333222211
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcC
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (727)
.. ......+|++.++|||||||.||||++||++++...........++..|+.++.+|+.|..|++.++.+++.|
T Consensus 176 ----~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~ 250 (537)
T KOG1176|consen 176 ----DG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAG 250 (537)
T ss_pred ----cc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhC
Confidence 11 3455679999999999999999999999999988877666667778899999999999999999888877777
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
++.++....+++..+++.|++|++|+++++|.++..|++.+.....+++++|.+.+||++++++..+.+.++++...+.+
T Consensus 251 ~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q 330 (537)
T KOG1176|consen 251 GTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAPLSPATLEKVKERLPNVTVIQ 330 (537)
T ss_pred CceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCCCCHHHHHHHHHhCCCceEEE
Confidence 77777776779999999999999999999999999999987777789999999999999999999999999998789999
Q ss_pred cccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccc
Q 004860 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~ 577 (727)
.||+||+++..+.+........+++|+++++.+..|.++.|+.+++++. ||||+ ..||++ |++.|++
T Consensus 331 ~YGmTE~~~~~~~~~~~~e~k~~svG~~~~g~~~~v~~e~g~~l~~~~~--GEI~vrg~~imkGY~~------NpeaT~~ 402 (537)
T KOG1176|consen 331 GYGMTEAGGLITSNDWGPERKPGSVGRLLPGVRVKVLDETGVSLGPNQT--GEICVRGPQVMKGYLK------NPEATKE 402 (537)
T ss_pred eeccccccCceeecCCCccCcccccCccccceEEEeeCCCCCCCCCCCc--eEEEEECcccchhhcC------ChHHHHh
Confidence 9999999976666555443578899999999999999999999999996 99999 467776 5557777
Q ss_pred cccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
.|.++ .||+|||+|++|+||+|++.+|++|+||.+|++|+|.|||++|. .||.|.||+|++++|+..| +.++
T Consensus 403 ~~~~~------GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~-~hP~V~eaaVvgipDe~~G-e~p~ 474 (537)
T KOG1176|consen 403 AFDDD------GWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLL-THPDVLEAAVVGIPDEVWG-ETPA 474 (537)
T ss_pred hcccC------CccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHH-hCCCccEEEEEcccccccC-Ccce
Confidence 77653 29999999999999999999999999999999999999999996 9999999999999999999 9999
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhh
Q 004860 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 721 (727)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 721 (727)
||||.++|...++++++++ ++++|++|++|..++|+++||+|+||||.|+.|++++.+..
T Consensus 475 A~VV~k~g~~lte~di~~~----v~k~l~~y~~~~~V~Fvd~lPKs~~GKi~R~~lr~~~~~~~ 534 (537)
T KOG1176|consen 475 AFVVLKKGSTLTEKDIIEY----VRKKLPAYKLPGGVVFVDELPKTPNGKILRRKLRDIAKKLG 534 (537)
T ss_pred EEEEecCCCcCCHHHHHHH----HHhhCChhhccCeEEEeccCCCCCcchHHHHHHHHHHHhcc
Confidence 9999999888888888776 66788889999999999999999999999999999997654
No 21
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2.8e-73 Score=570.65 Aligned_cols=504 Identities=20% Similarity=0.235 Sum_probs=422.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+++-||+.|+++..++ .++||+|+.+.++++|..|.++ +++||||+|..||+.+|+.++|||.++|.+.++++
T Consensus 60 t~~v~dkea~Vf~~eg------~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~AG~v~v~~N 133 (596)
T KOG1177|consen 60 TERVPDKEAAVFDHEG------IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARAGLVLVNLN 133 (596)
T ss_pred hhccCcceEEEEeecc------chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHhceEEeccC
Confidence 4678999999987653 3799999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh----------------CCCcEEEEcCCCCCCCCCCCcC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----------------APLKAIVLPAIGNDVGIPLREQ 328 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~v~~~~~~~~~~~~~~~ 328 (727)
|.|+.+++++.|+..+++++++...+. .-.....+.+. ++....++-.+.. ..-.+
T Consensus 134 P~Yq~~elr~~L~k~~~k~l~~p~~~k----~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed----~~~~G 205 (596)
T KOG1177|consen 134 PAYQSEELRYVLKKVGCKALFAPPQFK----TQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADED----HPLPG 205 (596)
T ss_pred cccccHHHHHHHhhcCeEEEEccchhh----hchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCC----CcCCC
Confidence 999999999999999999999987532 11111222211 2222333322211 11245
Q ss_pred cccHHHHhcccCCCCC-CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccc
Q 004860 329 DLSWKDFLSSVDYHPR-PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLG 407 (727)
Q Consensus 329 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~ 407 (727)
...+++++...+.... ..........||+++.|.|||||||.|||+.+||-|++|+......++++...+++++..|+.
T Consensus 206 a~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~ 285 (596)
T KOG1177|consen 206 AFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLY 285 (596)
T ss_pred ceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchH
Confidence 6677887776654111 111122346789999999999999999999999999999999999999999999999999999
Q ss_pred cccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChh
Q 004860 408 WVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVD 486 (727)
Q Consensus 408 ~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~ 486 (727)
|.++. ..++.+|+.|+|+|++...+++...++.|.++++|.++.+|+++..|++.+.....+++++|.++.||+++|++
T Consensus 286 H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr~~vigGa~~s~e 365 (596)
T KOG1177|consen 286 HCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLRKGVIGGAPVSPE 365 (596)
T ss_pred HHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhhhheeCCCCCCHH
Confidence 99995 67899999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred hHHHHHhhCCCCcccccccccccccccccCCCCC--CccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----e
Q 004860 487 DDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----F 559 (727)
Q Consensus 487 ~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~ 559 (727)
+.+.+.....-..+...||+||++...+.....+ .....++|..+++.+..|+|.+|.++|.|++ |||++ +
T Consensus 366 Llk~iv~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~~~g~~v~~~~~--Gel~iRGY~tM 443 (596)
T KOG1177|consen 366 LLKLIVNQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVDKDGSEVPLGTK--GELLIRGYSTM 443 (596)
T ss_pred HHHHHHHhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhcccccccccccCCCCccccCCC--ceEEEEechhh
Confidence 9888776543224788999999997655544433 2345689999999999999999999999998 99998 4
Q ss_pred cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCce
Q 004860 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (727)
Q Consensus 560 ~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (727)
.+|++.. +.|++.. ..+|||+|||+|++|++|+++++||.+|+|+.+|++|+|.|||+.|. +||.|.
T Consensus 444 l~Ywg~~------~kT~eti------~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~fL~-~hp~V~ 510 (596)
T KOG1177|consen 444 LGYWGEE------EKTKETI------GNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELEDFLN-KHPLVK 510 (596)
T ss_pred eeecCCc------ccchhhc------ccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHHHHh-hCCCee
Confidence 5666632 2333322 24679999999999999999999999999999999999999999996 999999
Q ss_pred eeEEEeecCCCCCceEEEEEEEecCCCC--CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHH
Q 004860 640 ETAAISVSPAGGGPEVLVIFVVLKKGFT--SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 717 (727)
Q Consensus 640 ~a~vv~~~~~~~~~~~l~a~vv~~~~~~--~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~ 717 (727)
++.||+++|+..| +.+||+|-++.+.. .+.++|+++ ++.+|..|.+|+.|++++++|+|-+|||.|-++++++
T Consensus 511 ~a~VVGV~D~R~G-E~VCA~vRLqe~~e~~~t~E~lKa~----Ck~klaHFKiPky~vf~~~FPlT~tGKIqKFeir~~~ 585 (596)
T KOG1177|consen 511 EAHVVGVPDERLG-EEVCACVRLQEGAEGKTTAETLKAM----CKGKLAHFKIPKYFVFVDEFPLTTTGKIQKFEIREMS 585 (596)
T ss_pred eEEEEccCCCccc-ceEEEEEEeeccccccccHHHHHHH----HhcccccccCCcEEEEeccCcccccccchhHHHHHHH
Confidence 9999999999999 99999999998765 355555554 6677999999999999999999999999999999999
Q ss_pred hhhhcc
Q 004860 718 KHELSV 723 (727)
Q Consensus 718 ~~~~~~ 723 (727)
+.+++-
T Consensus 586 k~~l~l 591 (596)
T KOG1177|consen 586 KGHLGL 591 (596)
T ss_pred Hhhcce
Confidence 987764
No 22
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.8e-71 Score=620.56 Aligned_cols=488 Identities=71% Similarity=1.165 Sum_probs=380.2
Q ss_pred cCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCC
Q 004860 240 MPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN 319 (727)
Q Consensus 240 ~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 319 (727)
++|++++++++|||+++|++++|+++.++.+++.++|++++++++|+++......+..+....+........+++...+.
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 80 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAIVLPAAGE 80 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEEEEeccCc
Confidence 58999999999999999999999999999999999999999999999875422222223333332222223333322111
Q ss_pred CCCCCCCcCcccHHHHhcccCCCC--CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCC
Q 004860 320 DVGIPLREQDLSWKDFLSSVDYHP--RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG 397 (727)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~ 397 (727)
...........+|++++....... ...........++++++|+|||||||.||||++||++++.........++++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 160 (499)
T PLN03051 81 PVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAHMDIQPG 160 (499)
T ss_pred ccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHhcCCCCC
Confidence 000000112345666653211100 000111122356899999999999999999999999987766555566788999
Q ss_pred CEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeE
Q 004860 398 DVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRS 475 (727)
Q Consensus 398 d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~ 475 (727)
|++++.+|++|+.+.+.++.+|+.|+++++.++..++..+++.|+++++|++.++|+++..|++... ....++++||.
T Consensus 161 d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~~~~~~~~~Lr~ 240 (499)
T PLN03051 161 DVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFAMEGLDWSKLRV 240 (499)
T ss_pred CEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccccccCCchhheE
Confidence 9999999999999988888999999999998765677899999999999999999999999987542 33457889999
Q ss_pred EEeecCCCChhhHHHHHhhCC-CCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeee
Q 004860 476 FASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVG 554 (727)
Q Consensus 476 i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giG 554 (727)
+++|||+++++..+++.+..+ +++++|.||+||++..++......+...+++|+|.++++++|+|++|+++|.|+..+|
T Consensus 241 i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd~~g~~~~~g~~~~G 320 (499)
T PLN03051 241 FASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLNDNGVPYPDDQPCVG 320 (499)
T ss_pred EEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeecccccCCCCCccccCCCCCceEEEECCCCCCCCCCCCcce
Confidence 999999999988877766322 3689999999998754333222223345789999999999999999999999852259
Q ss_pred eEEEecccCCCCccccccccccccccccccC--CCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHh
Q 004860 555 EVGLFPLYLGASDRLLNADHEEVYFRGMPMY--KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (727)
Q Consensus 555 el~v~~~y~~~~~~~~~~~~~~~~f~~~p~~--~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (727)
||++..++++.+.+|++++.++.+|.++|+. ++.+||+|||+|++|+||+|+|+||.||+||++|+||+|.|||++|.
T Consensus 321 el~v~g~~~~~~~gy~~~~~~~~~~~g~~~~~~~~~~~~~TGDlg~~d~dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~ 400 (499)
T PLN03051 321 EVALAPPMLGASDRLLNADHDKVYYKGMPMYGSKGMPLRRHGDIMKRTPGGYFCVQGRADDTMNLGGIKTSSVEIERACD 400 (499)
T ss_pred EEEEecCcCCCCccccCCcccceeeecCCccccCCcceeecCCeEEECCCCcEEEEeccCCEEeeCCEECCHHHHHHHHH
Confidence 9999665555444555655455555555543 56779999999999999999999999999999999999999999995
Q ss_pred hcCCCceeeEEEeecCCCCCceEEEEEE---EecCCC-CCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchh
Q 004860 633 QADESILETAAISVSPAGGGPEVLVIFV---VLKKGF-TSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 708 (727)
Q Consensus 633 ~~~p~V~~a~vv~~~~~~~~~~~l~a~v---v~~~~~-~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKv 708 (727)
+.||+|.+|+|++++++..|.+.+++|| +++++. ..+.++++++++++++++|++|++|..|+++++||+|+||||
T Consensus 401 ~~~p~V~~aavvg~~d~~~g~~~~~a~v~~~v~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi 480 (499)
T PLN03051 401 RAVAGIAETAAVGVAPPDGGPELLVIFLVLGEEKKGFDQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNKL 480 (499)
T ss_pred hcCCCcceEEEEEecCCCCCceEEEEEEEcceecccccccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCccH
Confidence 2399999999999999887756899999 777664 466789999999999999999888888999999999999999
Q ss_pred hHHHHHHHHhhhhcccCCC
Q 004860 709 LRRVLRDQIKHELSVRSRI 727 (727)
Q Consensus 709 dR~~L~~~~~~~~~~~~~~ 727 (727)
+|++|++.+.+.+.-+||+
T Consensus 481 ~r~~L~~~~~~~~~~~~~~ 499 (499)
T PLN03051 481 LRRVLRDQLKKELSGRSKL 499 (499)
T ss_pred HHHHHHHHHHHhhccccCC
Confidence 9999999999988888775
No 23
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-70 Score=618.04 Aligned_cols=491 Identities=25% Similarity=0.281 Sum_probs=403.6
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+..+|+++|+++.+..+ ++||+||+++++++|+.|++. |++||+|+|+++|+++++++++||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~~~------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~~Gav~vpln 94 (534)
T COG0318 21 ARRNPDRPALIFLGRGG------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALRAGAVAVPLN 94 (534)
T ss_pred HHhCCCceEEEEcCCCc------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeecC
Confidence 36899999999988721 399999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCc-ccHHHHhcccCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQD-LSWKDFLSSVDYHP 343 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 343 (727)
|.+..+++.+++++++++++++++.+. +....+....+....+........ .. .++.+.......
T Consensus 95 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~-- 160 (534)
T COG0318 95 PRLTPRELAYILNDAGAKVLITSAEFA------ALLEAVAEALPVVLVVLLVGDADD------RLPITLEALAAEGPG-- 160 (534)
T ss_pred cccCHHHHHHHHHhcCCeEEEEcccch------hHHHHHhccCCcceEEEecccccc------cccccHHHHhhccCC--
Confidence 999999999999999999999997522 122222222221111211111000 00 245555332211
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC--CCCCCEEEEecccccccchHHh-HHhhh
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPVIL-FSSFL 420 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~~~-~~~l~ 420 (727)
.........++++++++|||||||.||||++||+|++.+.......++ +++.|++++.+|++|++++... +.+++
T Consensus 161 --~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~~~~~~~ 238 (534)
T COG0318 161 --PDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVGLLAPLL 238 (534)
T ss_pred --cccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHHHHHHHH
Confidence 011111267899999999999999999999999999988888878888 8999999999999999999754 45589
Q ss_pred cCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccc-eeEEEeecCCCChhhHHHHHhhCCCC
Q 004860 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK-IRSFASTGETSNVDDDLWLSSKAWYN 498 (727)
Q Consensus 421 ~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~-Lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (727)
.|+++++.++ .+++..++..+.++++|++.++|+++..|+........++++ ||.+++||++++++..+.+.++++..
T Consensus 239 ~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~ 318 (534)
T COG0318 239 GGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLERFEERFGPI 318 (534)
T ss_pred cCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHHHHHHHhCCC
Confidence 9999999875 578889999999999999999999999999887766666665 99999999999999999999888766
Q ss_pred cccccccccccccccccCCCCC-CccccccccCCCCceEEEECCCCC-cCCCCCCeeeeEEE-----ecccCCCCccccc
Q 004860 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGV-PYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (727)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~-~~p~G~~giGel~v-----~~~y~~~~~~~~~ 571 (727)
++++.||+||++..++...... ....+.+|+|+++++++|+|+++. ++| |+ +|||++ ..||++++
T Consensus 319 ~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~pg~~v~Ivd~~~~~~~p-g~--vGei~irgp~v~~GY~~~p----- 390 (534)
T COG0318 319 AILEGYGLTETSPVVTINPPDDLLAKPGSVGRPLPGVEVRIVDPDGGEVLP-GE--VGEIWVRGPNVMKGYWNRP----- 390 (534)
T ss_pred ceEEeecccccCceeecCCCchhhhcCCcccccCCCcEEEEEeCCCCccCC-CC--ceEEEEECchhhhhhcCCh-----
Confidence 8999999999997666555544 235667799999999999997665 666 77 599998 46666643
Q ss_pred cccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCC
Q 004860 572 ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGG 651 (727)
Q Consensus 572 ~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~ 651 (727)
+.|+..|.+ ..||+|||+|++|+||+++|+||.+|+||++|++|+|.|||.++. +||.|.+++|++++|+.+
T Consensus 391 -e~t~~~f~~------~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~-~~~~V~~aavvgvpd~~~ 462 (534)
T COG0318 391 -EATAEAFDE------DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLA-EHPAVAEAAVVGVPDERW 462 (534)
T ss_pred -HHHHHhhcc------CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHH-hCCCcceEEEEeCCCCcc
Confidence 355555543 239999999999999999999999999999999999999999995 999999999999999999
Q ss_pred CceEEEEEEEecCCC--CCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 652 GPEVLVIFVVLKKGF--TSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 652 ~~~~l~a~vv~~~~~--~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
| ++++|+|+++++. ..+.+++.++ ++++++.|++|+.++++++||+|++||++|+.|++.+..
T Consensus 463 G-e~~~a~v~~~~~~~~~~~~~~i~~~----~~~~l~~~~~P~~v~~v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 463 G-ERVVAVVVLKPGGDAELTAEELRAF----LRKRLALYKVPRIVVFVDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred C-ceEEEEEEEcCCCCCCCCHHHHHHH----HHhhhhcccCCeEEEEeCCCCCCCchhhhHHHHHHHHHh
Confidence 9 9999999999863 3355666555 666889999999999999999999999999999999876
No 24
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-70 Score=623.89 Aligned_cols=482 Identities=21% Similarity=0.225 Sum_probs=395.7
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+++++||++|+++.++ ++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 58 ~a~~~pd~~Al~~~~~--------~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~l 129 (549)
T PRK07788 58 AARRAPDRAALIDERG--------TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIILL 129 (549)
T ss_pred HHHHCCCceEEEECCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 3478999999998766 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc-EEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
++.++.+++.+++++++++++|+++.... ....+....... .++....... ....+...++++......
T Consensus 130 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~- 199 (549)
T PRK07788 130 NTGFSGPQLAEVAAREGVKALVYDDEFTD------LLSALPPDLGRLRAWGGNPDDDE---PSGSTDETLDDLIAGSST- 199 (549)
T ss_pred CCCCCHHHHHHHHHhcCCcEEEECchhHH------HHHhhccccccceEEEEecCccc---cCCcCcccHHHHhcCCCC-
Confidence 99999999999999999999999875431 111111111111 1111111100 111234567776654321
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcC
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (727)
......+++.++++|||||||+||||+++|+++++.+......+++.++|++++..|++|..++..++.++..|
T Consensus 200 ------~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G 273 (549)
T PRK07788 200 ------APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALG 273 (549)
T ss_pred ------CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhC
Confidence 11123457889999999999999999999999998888777788899999999999999999988788899999
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC--CCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
+++++.. ..++..+++.|+++++|++.++|+++..|++.... ...++++||.+++|||++++++.+++.+.+ ++++
T Consensus 274 ~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-~~~l 351 (549)
T PRK07788 274 STVVLRR-RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAF-GPVL 351 (549)
T ss_pred CEEEECC-CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHh-Cccc
Confidence 9998874 56889999999999999999999999999886543 455688999999999999999999888776 4689
Q ss_pred cccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCccccccccc
Q 004860 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHE 575 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~ 575 (727)
+|.||+||++.+............+++|+|+++++++|+|++++++|.|+. |||++. .||++.+. .
T Consensus 352 ~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~-------~ 422 (549)
T PRK07788 352 YNLYGSTEVAFATIATPEDLAEAPGTVGRPPKGVTVKILDENGNEVPRGVV--GRIFVGNGFPFEGYTDGRD-------K 422 (549)
T ss_pred eeccCcchhchhhccChhhhhhcCCCcccCCCCcEEEEECCCcCCCCCCCe--EEEEEeCCCccccccCCCc-------c
Confidence 999999999865443322222345789999999999999999999999985 999994 34443221 1
Q ss_pred cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceE
Q 004860 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (727)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~ 655 (727)
.. . ..||+|||+|++++||+++|+||+||+||++|++|+|.|||++|. +||+|.+++|++.+++..+ +.
T Consensus 423 -~~------~--~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~ 491 (549)
T PRK07788 423 -QI------I--DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLA-GHPDVVEAAVIGVDDEEFG-QR 491 (549)
T ss_pred -cc------c--CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHH-hCCCeeEEEEECCcCcccc-cE
Confidence 11 1 139999999999999999999999999999999999999999995 9999999999999988878 89
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHH
Q 004860 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 716 (727)
+++||+++++...+.+++++ +++++|++|++|..|+++++||+|+|||++|++|+++
T Consensus 492 ~~a~vv~~~~~~~~~~~l~~----~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~ 548 (549)
T PRK07788 492 LRAFVVKAPGAALDEDAIKD----YVRDNLARYKVPRDVVFLDELPRNPTGKVLKRELREM 548 (549)
T ss_pred EEEEEEeCCCCCCCHHHHHH----HHHHhhhcCCCCcEEEEeCCCCCCCCcCEeHHHhhcc
Confidence 99999998876666555555 4677889999999999999999999999999999863
No 25
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.7e-70 Score=618.93 Aligned_cols=512 Identities=22% Similarity=0.309 Sum_probs=423.3
Q ss_pred CcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004860 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (727)
Q Consensus 166 ~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~ 244 (727)
+|+.+...|.++.++++++ +..+||++|+++.+.. ..+++||+||.++++++|++|.++ +++||+|+|+++|++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~~~~----~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 109 (570)
T PRK04319 35 SWLETGKVNIAYEAIDRHA-DGGRKDKVALRYLDAS----RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIP 109 (570)
T ss_pred ccCCCCceeHHHHHHHHhh-ccCCCCceEEEEECCC----CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCH
Confidence 6888889999998888764 2357999999986531 234899999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCC
Q 004860 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG 322 (727)
Q Consensus 245 ~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~ 322 (727)
++++++|||+++|++++|+++.++.+++.+++++++++++|+++........ ...+. .++++.....
T Consensus 110 ~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~--- 178 (570)
T PRK04319 110 ELYFALLGALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--------DDLPSLKHVLLVGEDVE--- 178 (570)
T ss_pred HHHHHHHHHHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--------hcCCCceEEEEECCCcC---
Confidence 9999999999999999999999999999999999999999998764322110 01111 2223221110
Q ss_pred CCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEE
Q 004860 323 IPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCW 402 (727)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~ 402 (727)
...+..+|.+++..... ........++++++|+|||||||.||||+++|+++++.+......+++.++|++++
T Consensus 179 --~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~ 251 (570)
T PRK04319 179 --EGPGTLDFNALMEQASD-----EFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWC 251 (570)
T ss_pred --CCcCccCHHHHHhhcCC-----cCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEe
Confidence 11234456666544321 11223346789999999999999999999999999988877777788999999999
Q ss_pred ecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEee
Q 004860 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFAST 479 (727)
Q Consensus 403 ~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~g 479 (727)
..++.|..+. +.++.++..|+++++.+...++..+++.|+++++|++.++|++++.|.+... ....++++||.+++|
T Consensus 252 ~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~g 331 (570)
T PRK04319 252 TADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSV 331 (570)
T ss_pred cCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEc
Confidence 9999999886 6688999999999998777889999999999999999999999999987542 234568899999999
Q ss_pred cCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe
Q 004860 480 GETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF 559 (727)
Q Consensus 480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~ 559 (727)
|++++++..+++.+.+ +.++++.||+||++..++..........+++|+|+++++++|+|++++++|.|+. |||++.
T Consensus 332 G~~l~~~~~~~~~~~~-g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~g~~~~i~d~~~~~~~~g~~--Gel~i~ 408 (570)
T PRK04319 332 GEPLNPEVVRWGMKVF-GLPIHDNWWMTETGGIMIANYPAMDIKPGSMGKPLPGIEAAIVDDQGNELPPNRM--GNLAIK 408 (570)
T ss_pred ccCCCHHHHHHHHHHh-CCCeEeceeecccCCEEEecCCCCCCCCCcCcCCCCCCEEEEECCCCCCCCCCCc--eEEEEc
Confidence 9999999998888765 5789999999999865443333233456789999999999999999999999986 999984
Q ss_pred c-------ccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHh
Q 004860 560 P-------LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (727)
Q Consensus 560 ~-------~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (727)
. ||++. ++.+..+|. .| ||+|||+|++++||+++++||.||+||++|++|+|.|||++|.
T Consensus 409 ~~~~~~~~GY~~~------~~~~~~~~~-----~g--w~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~ 475 (570)
T PRK04319 409 KGWPSMMRGIWNN------PEKYESYFA-----GD--WYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLM 475 (570)
T ss_pred CCCChHHhHhcCC------HHHhhhhhc-----CC--ceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHh
Confidence 3 55553 334555554 12 9999999999999999999999999999999999999999996
Q ss_pred hcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHH
Q 004860 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRV 712 (727)
Q Consensus 633 ~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~ 712 (727)
+||.|.+++|++.+++..+ +.+++|+++.++...+ +++.+.|+++++++|++|++|..|+++++||+|++||++|+.
T Consensus 476 -~~~~V~~~~v~g~~~~~~g-~~~~a~v~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~ 552 (570)
T PRK04319 476 -EHPAVAEAGVIGKPDPVRG-EIIKAFVALRPGYEPS-EELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTRSGKIMRRV 552 (570)
T ss_pred -hCCCeeecceecccCcCCc-eEEEEEEEECCCCCCC-HHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCCchhhhHHH
Confidence 9999999999999998888 9999999988765433 566678888899999999999999999999999999999999
Q ss_pred HHHHHhh
Q 004860 713 LRDQIKH 719 (727)
Q Consensus 713 L~~~~~~ 719 (727)
|+++..+
T Consensus 553 L~~~~~~ 559 (570)
T PRK04319 553 LKAWELG 559 (570)
T ss_pred HHHHHhC
Confidence 9998754
No 26
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.3e-69 Score=628.45 Aligned_cols=465 Identities=18% Similarity=0.216 Sum_probs=384.7
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC
Q 004860 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (727)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~ 266 (727)
.+||++|+++ +. .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|.
T Consensus 18 ~~pd~~a~~~-~~--------~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~vpi~p~ 88 (705)
T PRK06060 18 GWYDRPAFYA-AD--------VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMAFLANPE 88 (705)
T ss_pred cCCCceEEEe-cC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEEEecCCC
Confidence 3799999986 33 799999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCC
Q 004860 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (727)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (727)
++.+++.+++++++++++|+++........ .. + ..+.+....... ..
T Consensus 89 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~------------~~--~----------------~~~~~~~~~~~~---~~ 135 (705)
T PRK06060 89 LHRDDHALAARNTEPALVVTSDALRDRFQP------------SR--V----------------AEAAELMSEAAR---VA 135 (705)
T ss_pred CCHHHHHHHHhcCCCcEEEEchHHhhhhcc------------cc--c----------------chhhhhhhhccc---cC
Confidence 999999999999999999998743211000 00 0 001111111000 00
Q ss_pred CCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc-hhcCCCCCCEEEEecccccccch-HHhHHhhhcCcE
Q 004860 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW-AHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (727)
Q Consensus 347 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~ 424 (727)
........+++++||+|||||||+||||+++|+++.+.+.+.. ..+++.++|++++.+++.|+.++ ..++.+|..|++
T Consensus 136 ~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~ 215 (705)
T PRK06060 136 PGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGS 215 (705)
T ss_pred CCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCE
Confidence 0011223568999999999999999999999999988776553 45788999999999999999887 568899999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+++.+...++..+..+++++++|+++++|+++..|+.... ..++++||.+++|||++++++.+++.+.+++++++|.|
T Consensus 216 ~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~--~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~Y 293 (705)
T PRK06060 216 AVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCS--PDSFRSLRCVVSAGEALELGLAERLMEFFGGIPILDGI 293 (705)
T ss_pred EEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc--cccccceeEEEEecCcCCHHHHHHHHHHcCCCceEeee
Confidence 9998766677888899999999999999999999987542 33578999999999999999999888888778999999
Q ss_pred cccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccc
Q 004860 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (727)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f 579 (727)
|+||++..+.... ......+++|+|+++++++|+|++++++|.|+. |||+| ..||++.++ .+ +
T Consensus 294 G~tE~~~~~~~~~-~~~~~~~~iG~p~~~~~v~i~d~~g~~~~~g~~--GEl~i~g~~v~~GY~~~~~------~~---~ 361 (705)
T PRK06060 294 GSTEVGQTFVSNR-VDEWRLGTLGRVLPPYEIRVVAPDGTTAGPGVE--GDLWVRGPAIAKGYWNRPD------SP---V 361 (705)
T ss_pred eccccCceEEecc-CCCCCcCcccccCCCcEEEEECCCCCCCCCCCc--eEEEEccchhhhhhhCCCc------cc---c
Confidence 9999986543332 222345789999999999999999999999996 99998 356776543 11 1
Q ss_pred cccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEE
Q 004860 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (727)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~ 659 (727)
.+.+||+|||+|++++||+++|+||+||+||++|+||+|.|||++|. .||+|.+++|++.++...+ +.+++|
T Consensus 362 ------~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~a~vv~~~~~~~~-~~~~a~ 433 (705)
T PRK06060 362 ------ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLII-EDEAVAEAAVVAVRESTGA-STLQAF 433 (705)
T ss_pred ------cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeecCccCC-eeEEEE
Confidence 13459999999999999999999999999999999999999999996 8999999999999987776 899999
Q ss_pred EEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHH
Q 004860 660 VVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 717 (727)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~ 717 (727)
|+...+...+.+ ..+.++++++++||+||+|..|+++++||+|+|||+||++|++++
T Consensus 434 vv~~~~~~~~~~-~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~~~~ 490 (705)
T PRK06060 434 LVATSGATIDGS-VMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALRKQS 490 (705)
T ss_pred EEeccccCcChH-HHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHHhhc
Confidence 998766544433 334567788999999999999999999999999999999999875
No 27
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.2e-68 Score=614.93 Aligned_cols=517 Identities=21% Similarity=0.206 Sum_probs=400.7
Q ss_pred hhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHh
Q 004860 178 CCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILA 256 (727)
Q Consensus 178 ~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~ka 256 (727)
..+.+. ++++||++|+++....+.....+++||+||.++++++|+.|+++ +++||+|+++++|++++++++|||+++
T Consensus 29 ~~l~~~--a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~lA~~~~ 106 (632)
T PRK07529 29 ELLSRA--AARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALWGGEAA 106 (632)
T ss_pred HHHHHH--HHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 344433 37899999999853322223346999999999999999999999 999999999999999999999999999
Q ss_pred CCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc--EEEEcCCCCCCCC-C---------
Q 004860 257 GYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGI-P--------- 324 (727)
Q Consensus 257 Ga~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~-~--------- 324 (727)
| +++|++|.++++++.+++++++++++|+++..... ...+.........+.. ++.+......... .
T Consensus 107 G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 184 (632)
T PRK07529 107 G-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGT-DIWQKVAEVLAALPELRTVVEVDLARYLPGPKRLAVPLIRRK 184 (632)
T ss_pred C-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCc-hHHHHHHHHHhcCCcceeEEEecCcccccccccccccccccc
Confidence 9 56999999999999999999999999998753210 0111111112222222 2222211100000 0
Q ss_pred CCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEec
Q 004860 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPT 404 (727)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~ 404 (727)
...+..+|.+.+..... ..........++++++++|||||||.||||+++|+++++........+++.++|++++..
T Consensus 185 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~ 261 (632)
T PRK07529 185 AHARILDFDAELARQPG---DRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGLGPGDTVFCGL 261 (632)
T ss_pred cccccCCHHHHHhcCCC---ccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 11233456665544322 111112234679999999999999999999999999988877776778889999999999
Q ss_pred ccccccch-HHhHHhhhcCcEEEEecCCC--C---hhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEe
Q 004860 405 NLGWVMGP-VILFSSFLNGATLALYQGSP--L---ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (727)
Q Consensus 405 ~~~~~~~~-~~~~~~l~~G~~lv~~~~~~--~---~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~ 478 (727)
|++|..+. ..++.+|..|+++++.+... + ...++++|+++++|++.++|+++..|++... ...++++||.+++
T Consensus 262 pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~-~~~~~~slr~v~~ 340 (632)
T PRK07529 262 PLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV-DGHDISSLRYALC 340 (632)
T ss_pred CchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc-cCCCccceEEEEE
Confidence 99998887 45789999999999976321 2 3578899999999999999999999987643 3356899999999
Q ss_pred ecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEE--CCCC---CcCCCCCCee
Q 004860 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECG---VPYPDDQPCV 553 (727)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vl--d~~~---~~~p~G~~gi 553 (727)
||+++++++.+++.+.+ +++++|.||+||+++++...........+++|+|++++.++|+ |++| +++|.|+.
T Consensus 341 gg~~l~~~l~~~~~~~~-g~~l~~~YG~TE~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g~~-- 417 (632)
T PRK07529 341 GAAPLPVEVFRRFEAAT-GVRIVEGYGLTEATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVDEV-- 417 (632)
T ss_pred cCCCCCHHHHHHHHHHh-CCcEeeeecccccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCCCc--
Confidence 99999999999888765 6899999999999876544433333466899999999998884 7777 88999985
Q ss_pred eeEEEe-cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHh
Q 004860 554 GEVGLF-PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (727)
Q Consensus 554 Gel~v~-~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (727)
|||+|. ++.+.+ |++++.+...|. +.+||+|||+|++++||++++.||+||+||++|++|+|.|||++|.
T Consensus 418 Gel~v~gp~v~~G---Y~~~~~~~~~~~------~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~i~p~eIE~~l~ 488 (632)
T PRK07529 418 GVLCIAGPNVFSG---YLEAAHNKGLWL------EDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGHNIDPAAIEEALL 488 (632)
T ss_pred eEEEEECCCcccc---ccCCcccccccc------CCCceEcCcEEEEcCCceEEEEecccCEEEeCCEEECHHHHHHHHH
Confidence 999983 222221 233333444443 2349999999999999999999999999999999999999999996
Q ss_pred hcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcC-CCcccceEEEcCCCCCCCCchhhHH
Q 004860 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLN-PLFKVSLVKVVPEFPRTASNKLLRR 711 (727)
Q Consensus 633 ~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~-~~~~P~~i~~v~~lP~t~~GKvdR~ 711 (727)
+||+|.+|+|++.+++..| +.+++||+++++...+.+++.++ ++++|+ .+++|..|+++++||+|++||++|+
T Consensus 489 -~~p~V~~a~vvg~~d~~~g-e~~~a~v~l~~~~~~~~~~l~~~----~~~~l~~~~~~P~~i~~v~~lP~t~~GKi~r~ 562 (632)
T PRK07529 489 -RHPAVALAAAVGRPDAHAG-ELPVAYVQLKPGASATEAELLAF----ARDHIAERAAVPKHVRILDALPKTAVGKIFKP 562 (632)
T ss_pred -hCCCeeEEEEEeccCCCCC-ceeEEEEEEcCCCCCCHHHHHHH----HHHhcchhccCCcEEEEecCCCCCCCCcccHH
Confidence 8999999999999998888 99999999998777777777666 445554 4799999999999999999999999
Q ss_pred HHHHHHhhh
Q 004860 712 VLRDQIKHE 720 (727)
Q Consensus 712 ~L~~~~~~~ 720 (727)
+|++.+...
T Consensus 563 ~Lr~~~~~~ 571 (632)
T PRK07529 563 ALRRDAIRR 571 (632)
T ss_pred HHHHHHHHH
Confidence 999987543
No 28
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=5.4e-69 Score=607.16 Aligned_cols=488 Identities=18% Similarity=0.184 Sum_probs=381.5
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
.++++|+++|+.+.+.+ ++||+||.++++++|+.|.+. +||+|+|+++|++++++++|||+++|++++|++
T Consensus 28 ~~~~~p~~~a~~~~~~~-------~~Ty~el~~~~~~lA~~L~~~--~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 98 (539)
T PRK06334 28 LCSEMTTATVCWDEQLG-------KLSYNQVRKAVIALATKVSKY--PDQHIGIMMPASAGAYIAYFATLLSGKIPVMIN 98 (539)
T ss_pred HHHhCCCceEEEeCCCC-------cccHHHHHHHHHHHHHHHhhc--cCCeEEEEcCCchHHHHHHHHHHhcCCeeEecC
Confidence 34689999999876532 899999999999999999884 999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhh---hCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccC-
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG---AAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVD- 340 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~- 340 (727)
|.++.+++.++|++++++++|+++..... ...... ..+..++++.... ....+.+......
T Consensus 99 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~------~~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~ 163 (539)
T PRK06334 99 WSQGLREVTACANLVGVTHVLTSKQLMQH------LAQTHGEDAEYPFSLIYMEEVR---------KELSFWEKCRIGIY 163 (539)
T ss_pred cccchHHHHHHHHHcCCCEEEehHHHHHH------HhhhhhccccccccEEEEehhh---------hhccHHHhhhhhhh
Confidence 99999999999999999999998753211 111110 0111222222110 0001111110000
Q ss_pred -CCCCC---CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHh
Q 004860 341 -YHPRP---NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (727)
Q Consensus 341 -~~~~~---~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (727)
..+.. .........++++++|+|||||||.||||+++|+++.+...+....++++++|++++.+|+.|.+++ +.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~ 243 (539)
T PRK06334 164 MSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNSCT 243 (539)
T ss_pred hcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHHHH
Confidence 00000 0011123467999999999999999999999999999888777777889999999999999999887 447
Q ss_pred HHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhC
Q 004860 416 FSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (727)
Q Consensus 416 ~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~ 495 (727)
+.++.+|+++++.....++..+++.|+++++|++.++|++++.|++.......++++||.+++||+++++++.+++.+.+
T Consensus 244 ~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 323 (539)
T PRK06334 244 LFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALKTF 323 (539)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHHHC
Confidence 88999999999876556889999999999999999999999999876544556789999999999999999999998888
Q ss_pred CCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECC-CCCcCCCCCCeeeeEEE-----ecccCCCCccc
Q 004860 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (727)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v-----~~~y~~~~~~~ 569 (727)
+++.++|.||+||++.+++..........+++|+|++|++++|+|+ +++++|.|+. |||+| ..||++.++
T Consensus 324 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~~~~-- 399 (539)
T PRK06334 324 PHIQLRQGYGTTECSPVITINTVNSPKHESCVGMPIRGMDVLIVSEETKVPVSSGET--GLVLTRGTSLFSGYLGEDF-- 399 (539)
T ss_pred CCCeEEecccccccCceEEeccCCCCCCCCcCceecCCCEEEEEcCCCCccCCCCce--EEEEEecCcccccccCCcc--
Confidence 7889999999999986655443333334567999999999999995 5889999985 99998 456666433
Q ss_pred cccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCcee------eEE
Q 004860 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE------TAA 643 (727)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~------a~v 643 (727)
.+ .|.. .++.+||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|. +||+|.+ ++|
T Consensus 400 ----~~--~~~~---~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~-~~~~v~~~~~~~~~~v 469 (539)
T PRK06334 400 ----GQ--GFVE---LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILM-EGFGQNAADHAGPLVV 469 (539)
T ss_pred ----cc--ccee---eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHH-HccCCccccccCceEE
Confidence 11 2221 124569999999999999999999999999999999999999999996 9999998 667
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhh-cCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhh
Q 004860 644 ISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK-LNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 721 (727)
Q Consensus 644 v~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~-L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 721 (727)
++.++. . ..+++|++.. .+.+++++ .+++. ++.|++|+.++++++||+|+||||||+.|+++....+
T Consensus 470 ~~~~~~--~-~~~~~~~~~~----~~~~~~~~----~l~~~~~~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~ 537 (539)
T PRK06334 470 CGLPGE--K-VRLCLFTTFP----TSISEVND----ILKNSKTSSILKISYHHQVESIPMLGTGKPDYCSLNALAKSLF 537 (539)
T ss_pred EcCCCC--c-eEEEEEEecc----CChHHHHH----HHHhcCCcccccchheeeecccccccCCcccHHHHHHHHHHhh
Confidence 766642 2 4666666632 23345544 45554 7899999999999999999999999999999876543
No 29
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3.2e-68 Score=605.16 Aligned_cols=500 Identities=18% Similarity=0.137 Sum_probs=388.4
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+++++||++|+++.+. ++||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++||
T Consensus 16 ~~~~~p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~Gav~vpl 87 (563)
T PLN02860 16 LATLRGNAVVTISGNR--------RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAGGIVAPL 87 (563)
T ss_pred HHHhcCCceEEecCCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhccEEEEeC
Confidence 3478999999998665 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHh-hhCCCc-EEEEcCCCCCCCCCCCcCcccHHHHhcccCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL-GAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (727)
+|.++.+++.+++++++++++++++.... ....+. ...+.. ..++.................++++......
T Consensus 88 ~~~~~~~~l~~~l~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (563)
T PLN02860 88 NYRWSFEEAKSAMLLVRPVMLVTDETCSS------WYEELQNDRLPSLMWQVFLESPSSSVFIFLNSFLTTEMLKQRALG 161 (563)
T ss_pred CcccCHHHHHHHHHhcCceEEEEecccch------HHHHHhhccCCceeEEEEecCcccccccchhhccccchhccCccc
Confidence 99999999999999999999999875311 111111 111211 1111111000000000001111111111000
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhc
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (727)
.........++++++++|||||||.||||+++|++++.........+++.++|++++.+|++|+.++..++.++..
T Consensus 162 ----~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~ 237 (563)
T PLN02860 162 ----TTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSALAMLMV 237 (563)
T ss_pred ----cccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHHHHHHc
Confidence 0001112357899999999999999999999999998777666667889999999999999999999888899999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC--CCCCccceeEEEeecCCCChhhHHHHHhhCCCCc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (727)
|+++++.+ ..++..+++.|+++++|++.++|+++..|++.... ...++++||.+++||+++++++..++.+.+++++
T Consensus 238 G~~~v~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~ 316 (563)
T PLN02860 238 GACHVLLP-KFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLFPNAK 316 (563)
T ss_pred CceEEecC-CCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhcCCCc
Confidence 99999976 56888999999999999999999999999875322 2245789999999999999999999988887889
Q ss_pred ccccccccccccccccCCCCC----------------------CccccccccCCCCceEEEECCCCCcCCCCCCeeeeEE
Q 004860 500 IIESCGGTELSSAYIQGSLLQ----------------------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVG 557 (727)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----------------------~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~ 557 (727)
++|.||+||+++.++...... .....++|+|+++++++|+|++ .|+ +|||+
T Consensus 317 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~~~-----~g~--~Gel~ 389 (563)
T PLN02860 317 LFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGLDE-----SSR--VGRIL 389 (563)
T ss_pred eecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcEEEEecCC-----CCc--eeEEE
Confidence 999999999976443222111 0112378999999999999976 455 49999
Q ss_pred E-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHh
Q 004860 558 L-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (727)
Q Consensus 558 v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (727)
+ ..||++.+ +.++..|.. .+||+|||+|++++||+++|+||+||+||++|++|+|.|||++|.
T Consensus 390 v~g~~~~~GY~~~~------~~t~~~~~~------~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~ 457 (563)
T PLN02860 390 TRGPHVMLGYWGQN------SETASVLSN------DGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLS 457 (563)
T ss_pred EecCcccccccCCc------cccchhccC------CCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHH
Confidence 8 35666533 345444432 239999999999999999999999999999999999999999995
Q ss_pred hcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCC----------ChHHHHHHHHHHHHh-hcCCCcccceEEEc-CCC
Q 004860 633 QADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS----------QPDKLKMIFSKAIQS-KLNPLFKVSLVKVV-PEF 700 (727)
Q Consensus 633 ~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~----------~~~~l~~~l~~~l~~-~L~~~~~P~~i~~v-~~l 700 (727)
.||+|.+++|++.+++..+ +.++++|+++++... ......+.|++++++ .|++|++|..|+++ ++|
T Consensus 458 -~~p~V~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~P~~~~~~~~~l 535 (563)
T PLN02860 458 -QHPGVASVVVVGVPDSRLT-EMVVACVRLRDGWIWSDNEKENAKKNLTLSSETLRHHCREKNLSRFKIPKLFVQWRKPF 535 (563)
T ss_pred -hCCCcceeEEEEEecCcCC-ceEEEEEEECCccccccccchhhcccccccHHHHHHHHhhCcccccccceEEEEEecCC
Confidence 8999999999999998888 899999998875210 001112345556766 59999999988765 789
Q ss_pred CCCCCchhhHHHHHHHHhhhhccc
Q 004860 701 PRTASNKLLRRVLRDQIKHELSVR 724 (727)
Q Consensus 701 P~t~~GKvdR~~L~~~~~~~~~~~ 724 (727)
|+|++|||+|++|++++.+.+.+.
T Consensus 536 P~t~~GKi~r~~L~~~~~~~~~~~ 559 (563)
T PLN02860 536 PLTTTGKIRRDEVRREVLSHLQSL 559 (563)
T ss_pred CCCcccchhHHHHHHHHHHHHhcc
Confidence 999999999999999998877654
No 30
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.4e-68 Score=521.89 Aligned_cols=498 Identities=19% Similarity=0.245 Sum_probs=417.6
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+|+++||++|+++.++ .+||+||+++++++|..|+++ +++||+|.+.+||..++++.++|.+|+|+++|.-
T Consensus 37 ~A~~~pdriAv~d~~~--------~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~PVlA 108 (542)
T COG1021 37 HAARYPDRIAVIDGER--------RLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVAPVLA 108 (542)
T ss_pred HHhhcCCceEEecCcc--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcchhhc
Confidence 3479999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
-|.....+|.+..+.++++.+|.+... ..+..-++...+....+....++....... ....+..+.....
T Consensus 109 LpsHr~~Ei~~f~~~~e~~~~i~~~~~-~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~------~~~~~~~~~~~a~--- 178 (542)
T COG1021 109 LPSHRASELGAFASQIEAALLIVARQH-SGFDYRPFARELVAKHPTLRHVIVAGEAEH------PSVLEAALCHPAG--- 178 (542)
T ss_pred cchhhHHHHHHHHHhhcchheeechhh-cccCcHHHHHHHHhhCCcceEEEEccCCCC------cchhhhhhhCccc---
Confidence 999999999999999999999998753 345555666666666666444433322110 0111222222211
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchH--HhHHhhhc
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~ 421 (727)
...+..+.+++++||...+.||||.||-+..||..+..++....+.++++..+++++..|..|.+.+. .+++.+..
T Consensus 179 --~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssPG~LGv~~a 256 (542)
T COG1021 179 --LFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSPGALGVFLA 256 (542)
T ss_pred --cCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCcchhheeee
Confidence 12223455778899999999999999999999999999999999999999999999999999887763 58899999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
|+|+|+.+ ++++.....+|++++||+.-++|.+...|++....+..+++|||.+-+||..+++++.+++...+ +|.+-
T Consensus 257 gG~VVla~-~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~~~l-gC~LQ 334 (542)
T COG1021 257 GGTVVLAP-DPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVPAVL-GCQLQ 334 (542)
T ss_pred ccEEEECC-CCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhchhhh-CchHH
Confidence 99999976 67788899999999999999999999999999888899999999999999999999998887765 79999
Q ss_pred ccccccccccccccCCCCCCccccccccCC-CCceEEEECCCCCcCCCCCCeeeeEEEeccc-CCCCccccccccccccc
Q 004860 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGLFPLY-LGASDRLLNADHEEVYF 579 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld~~~~~~p~G~~giGel~v~~~y-~~~~~~~~~~~~~~~~f 579 (727)
+.+||.|.-++++--....+.-..+-|+|+ |.-+++|+|++|+++++|+. |++.....| +.+ +|..++..+..|
T Consensus 335 QVFGMAEGLvnyTRLDDp~E~i~~TQGrPlsP~DEvrvvD~dg~pv~pGE~--G~LltRGPYTirG--Yyrap~HNa~aF 410 (542)
T COG1021 335 QVFGMAEGLVNYTRLDDPPEIIIHTQGRPLSPDDEVRVVDADGNPVAPGEV--GELLTRGPYTIRG--YYRAPEHNARAF 410 (542)
T ss_pred HHhhhhhhhhcccccCCchHheeecCCCcCCCcceeEEecCCCCCCCCCCc--ceeeecCCeeeee--eccCchhhhhcc
Confidence 999999987766544333333345779986 46689999999999999996 999873222 221 222344667778
Q ss_pred cccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEE
Q 004860 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (727)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~ 659 (727)
..+. +|+|||++++++||+|.+.||.||||+.+|++|-.+|||+.|+ .||.|.+|++|+.+|+-.| ++.|||
T Consensus 411 ~a~G------FYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL-~HP~V~~AAlVampDelLG-EksCAf 482 (542)
T COG1021 411 DADG------FYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLL-RHPAVHDAALVAMPDELLG-EKSCAF 482 (542)
T ss_pred CcCC------ceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHh-hCchhhhhhhhcCchhhcC-cceeEE
Confidence 7654 7999999999999999999999999999999999999999997 9999999999999999999 999999
Q ss_pred EEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 660 VVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
|+.++. ..+..+++.++++ ..|..|++|++|.+++++|+|+-||||||+|++.+...
T Consensus 483 iv~~~~-~~~~~qlr~~L~~---~GlAa~K~PDrie~v~~~P~T~VGKIdKk~Lr~~l~~~ 539 (542)
T COG1021 483 IVVKEP-PLRAAQLRRFLRE---RGLAAFKLPDRIEFVDSLPLTAVGKIDKKALRRRLASR 539 (542)
T ss_pred EEecCC-CCCHHHHHHHHHH---cchhhhcCCcceeecccCCCcccccccHHHHHHHhhhh
Confidence 999864 3667788887654 68899999999999999999999999999999887654
No 31
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=2.4e-66 Score=588.34 Aligned_cols=497 Identities=21% Similarity=0.240 Sum_probs=398.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+.+||++|+++.+. ..+.++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 35 ~~~p~~~A~~~~~~--~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 35 ASCPDKTAVTAVRL--GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred HHCCCceEEEecCC--CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhcCcEEecccc
Confidence 57899999998652 123345999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC-
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH- 342 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 342 (727)
.++.+++.+++++++++++++++.+.. .+.......+....+. .++++... ...+|.+++......
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ 181 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKTFRG-FDHAAMARRLRPELPALRHVVVVGGD----------GADSFEALLITPAWEQ 181 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEeccccC-cchHHHHHHHhhhCCCcceEEEecCC----------CccCHHHHhhCCcccc
Confidence 999999999999999999999875421 0111111122222222 22222111 112344443221100
Q ss_pred --CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhh
Q 004860 343 --PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSF 419 (727)
Q Consensus 343 --~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l 419 (727)
............++++++++|||||||.||||+++|++++..+......+++.++|++++.+|++|..++ +.++.++
T Consensus 182 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~~l 261 (547)
T PRK13295 182 EPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQTGFMYGLMMPV 261 (547)
T ss_pred ccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhhHHHHHHHHH
Confidence 0001111223456899999999999999999999999999888887778899999999999999998876 6688999
Q ss_pred hcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCc
Q 004860 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (727)
Q Consensus 420 ~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (727)
..|+++++.+ ..++..+++.++++++|++.++|+++..|.........++++||.+++||+++++++.+++.+.+ +++
T Consensus 262 ~~G~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~ 339 (547)
T PRK13295 262 MLGATAVLQD-IWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLCAGAPIPGALVERARAAL-GAK 339 (547)
T ss_pred HcCCeEEeCC-CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEEecCCCCHHHHHHHHHHh-CCC
Confidence 9999999876 45788999999999999999999999999876655566788999999999999999998888776 689
Q ss_pred ccccccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccc
Q 004860 500 IIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (727)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~ 573 (727)
++|.||+||++.+.+..... ......++|+|++++.++|+|++++++|.|+. |||+| ..||+++++
T Consensus 340 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~gY~~~~~------ 411 (547)
T PRK13295 340 IVSAWGMTENGAVTLTKLDDPDERASTTDGCPLPGVEVRVVDADGAPLPAGQI--GRLQVRGCSNFGGYLKRPQ------ 411 (547)
T ss_pred eEEeccCCCCCCeeeccCCCcchhccCccccccCCcEEEEECCCCCCCCCCCC--CeEEEEcCcccccccCCcc------
Confidence 99999999998654333221 12234678999999999999999999999986 99998 345555332
Q ss_pred cccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCc
Q 004860 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (727)
Q Consensus 574 ~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~ 653 (727)
.++.. ..| ||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+++|++.+++..+
T Consensus 412 ~t~~~------~~g--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~-~~~~v~~~~v~~~~~~~~g- 481 (547)
T PRK13295 412 LNGTD------ADG--WFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLY-RHPAIAQVAIVAYPDERLG- 481 (547)
T ss_pred ccccC------CCC--CeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCeeeEEEEeeecCCCC-
Confidence 33322 123 9999999999999999999999999999999999999999995 8999999999999988887
Q ss_pred eEEEEEEEecCCCCCChHHHHHHHHHHHHh-hcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQS-KLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~-~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
++++++|++.++...+.+++.+ .+++ .|++|++|..++++++||+|++||++|++|++++.+.
T Consensus 482 ~~~~~~v~~~~~~~~~~~~l~~----~~~~~~l~~~~~P~~i~~v~~lP~t~sgK~~r~~L~~~~~~~ 545 (547)
T PRK13295 482 ERACAFVVPRPGQSLDFEEMVE----FLKAQKVAKQYIPERLVVRDALPRTPSGKIQKFRLREMLRGE 545 (547)
T ss_pred cEEEEEEEeCCCCCCCHHHHHH----HHHhccCccccCCcEEEEeccCCCCCCccccHHHHHHHHhcC
Confidence 8999999988765555555554 4554 7999999999999999999999999999999988653
No 32
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-67 Score=591.80 Aligned_cols=481 Identities=18% Similarity=0.184 Sum_probs=388.4
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+++++||++|+++.++ ++||+||+++++++|++|.++ +++||+|+++++|++++++++|||+++|++++|+
T Consensus 52 ~a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 123 (537)
T PRK13382 52 AAQRCPDRPGLIDELG--------TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADILLL 123 (537)
T ss_pred HHHhCCCCeEEEeCCC--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEEec
Confidence 4478999999998665 999999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
+|.++.+++.+++++++++++|++.... ..........+....++..... .....++++......
T Consensus 124 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-- 188 (537)
T PRK13382 124 NTSFAGPALAEVVTREGVDTVIYDEEFS------ATVDRALADCPQATRIVAWTDE-------DHDLTVEVLIAAHAG-- 188 (537)
T ss_pred CcccCHHHHHHHHHhcCCCEEEEchhhH------HHHHHHHhhccccceEEEecCC-------cccccHHHHhhccCc--
Confidence 9999999999999999999999987532 1111111111111111111000 012334444432211
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCc
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (727)
. . ....+++.++++|||||||.||||+++|++++.........+.+..+++++...|++|+.++..++.++..|+
T Consensus 189 ---~-~-~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~ 263 (537)
T PRK13382 189 ---Q-R-PEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLAC 263 (537)
T ss_pred ---C-C-CCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCc
Confidence 0 0 1124678999999999999999999999998887777777788899999999999999999888889999999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
++++.+ ..++..+++.|+++++|++.++|++++.|++... ....++++||.+++|||+++++....+.+.++ .+++
T Consensus 264 ~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~-~~i~ 341 (537)
T PRK13382 264 TIVTRR-RFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFG-DVIY 341 (537)
T ss_pred EEEECC-CcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcC-CcEE
Confidence 988864 5678899999999999999999999999987542 22345678999999999999999988888764 6799
Q ss_pred ccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-cccCCCCcccccccccccccc
Q 004860 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-PLYLGASDRLLNADHEEVYFR 580 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-~~y~~~~~~~~~~~~~~~~f~ 580 (727)
|.||+||++..++..........+++|+|++++.++|+|++++++|.|+. |||++. ++.+.+ |. ++.++. |.
T Consensus 342 ~~YG~TE~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--GEl~v~g~~~~~g---Y~-~~~~~~-~~ 414 (537)
T PRK13382 342 NNYNATEAGMIATATPADLRAAPDTAGRPAEGTEIRILDQDFREVPTGEV--GTIFVRNDTQFDG---YT-SGSTKD-FH 414 (537)
T ss_pred ecccccccCcceecChhHhccCCCCccccCcCcEEEEECCCCCCCCCCCe--eEEEEEcCCcccC---cc-ccchhh-cc
Confidence 99999999875543332223456789999999999999999999999985 999983 322221 11 222222 21
Q ss_pred ccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEE
Q 004860 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (727)
Q Consensus 581 ~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~v 660 (727)
.| ||+|||++++++||+++|+||+||+||++|++|+|.|||++|. .||+|.+++|++.+++..+ +.++++|
T Consensus 415 -----~g--~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~-~~~~V~~~~v~~~~~~~~g-~~~~a~v 485 (537)
T PRK13382 415 -----DG--FMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLA-THPDVAEAAVIGVDDEQYG-QRLAAFV 485 (537)
T ss_pred -----CC--CEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHH-hCCCEeeEEEEccCccccC-CEEEEEE
Confidence 23 9999999999999999999999999999999999999999995 9999999999999988777 8999999
Q ss_pred EecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHH
Q 004860 661 VLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 715 (727)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 715 (727)
++.++...+.++ +++++++.|++|++|..++++++||+|++||++|++|++
T Consensus 486 v~~~~~~~~~~~----l~~~l~~~l~~~~~P~~i~~v~~lP~t~~gK~~r~~L~~ 536 (537)
T PRK13382 486 VLKPGASATPET----LKQHVRDNLANYKVPRDIVVLDELPRGATGKILRRELQA 536 (537)
T ss_pred EECCCCCCCHHH----HHHHHHHhccCCCCCcEEEEeccCCCCCCCCCcHHhhCC
Confidence 988765444444 445677889999999999999999999999999999864
No 33
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=9.6e-67 Score=592.70 Aligned_cols=492 Identities=20% Similarity=0.236 Sum_probs=391.9
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+.+|+++|+++...+ .++||+||+++++++|++|.+ . +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 50 ~~~~~~~a~~~~~~~------~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 50 HNHNGDTALIDSSTG------FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cccCCCCEEEECCCC------CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcC
Confidence 468999999975431 279999999999999999999 8 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
|.++.+++.++++++++++++++++.. ..+.. ....++.+..... .. ........|.+++.....
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--- 188 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENV---------EKLSP-LGVPVIGVPENYD-FD-SKRIEFPKFYELIKEDFD--- 188 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHH---------HHHHh-cCCcEEecCcccc-cc-cCccCcccHHHHhhcCCc---
Confidence 999999999999999999999987532 11111 1112222211000 00 000112345554443221
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch----hcCC-CCCCEEEEecccccccch-HHhHHh
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDL-KVGDVYCWPTNLGWVMGP-VILFSS 418 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~-~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (727)
........++++++|+|||||||.||||+++|+++++.+..... .+.. ..+++++..+|+.|.+++ ..++.+
T Consensus 189 --~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~ 266 (560)
T PLN02574 189 --FVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGL 266 (560)
T ss_pred --ccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHH
Confidence 11122345789999999999999999999999999877654432 2222 356788999999999887 446677
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC-CCCCccceeEEEeecCCCChhhHHHHHhhCCC
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL-EGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~-~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (727)
+..|+++++.+ ..++..++++|+++++|++.++|+++..|.+.... ...++++||.+++||++++++..+++.+.+++
T Consensus 267 l~~G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~ 345 (560)
T PLN02574 267 LSLGSTIVVMR-RFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQTLPH 345 (560)
T ss_pred HhcCCEEEEec-CCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHHHCCC
Confidence 88999999886 46789999999999999999999999999876432 34568899999999999999999888888878
Q ss_pred CcccccccccccccccccCCC-CCCccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCcccc
Q 004860 498 NAIIESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (727)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~ 570 (727)
+++++.||+||++...+.... ......+++|+|+++++++|+| ++|+++|.|+. |||+| ..||++
T Consensus 346 ~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g~~--Gei~v~g~~~~~GY~~------ 417 (560)
T PLN02574 346 VDFIQGYGMTESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPGNC--GELWIQGPGVMKGYLN------ 417 (560)
T ss_pred CcEEecccccccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCCCC--eEEEEECcchhhhhcC------
Confidence 899999999999865433222 2223457899999999999999 78999999996 99999 345555
Q ss_pred ccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCC
Q 004860 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (727)
Q Consensus 571 ~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~ 650 (727)
+++.+...|.. .+||+|||+|++++||+++++||+||+||++|++|++.|||++|. .||+|.+++|++.+++.
T Consensus 418 ~~~~t~~~~~~------~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~V~~~~v~~~~~~~ 490 (560)
T PLN02574 418 NPKATQSTIDK------DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLI-SHPEIIDAAVTAVPDKE 490 (560)
T ss_pred ChhHhhhhccC------CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHH-hCCCcceEEEEccccCC
Confidence 33355555532 239999999999999999999999999999999999999999996 99999999999999887
Q ss_pred CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhc
Q 004860 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 722 (727)
Q Consensus 651 ~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 722 (727)
.+ +.+++||+.+++...+.+++. ++++++|++|+.|..++++++||+|++||++|+.|++++.+...
T Consensus 491 ~g-~~~~a~v~~~~~~~~~~~~l~----~~~~~~l~~~~~p~~v~~v~~iP~t~~GKi~r~~L~~~~~~~~~ 557 (560)
T PLN02574 491 CG-EIPVAFVVRRQGSTLSQEAVI----NYVAKQVAPYKKVRKVVFVQSIPKSPAGKILRRELKRSLTNSVS 557 (560)
T ss_pred CC-cceEEEEEeCCCCCCCHHHHH----HHHHHhccCcccCcEEEEeeccCCCCcchhhHHHHHHHHhhccc
Confidence 77 889999998876555555544 45778899999999999999999999999999999999866544
No 34
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.7e-66 Score=591.18 Aligned_cols=497 Identities=21% Similarity=0.235 Sum_probs=393.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++.+|+++|++..++ .+||+||+++++++|++|.+ . +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 34 a~~~p~~~al~~~~~--------~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~v~l 105 (562)
T PRK05677 34 CQRFADKPAFSNLGK--------TLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEeec
Confidence 367899999998666 89999999999999999997 6 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCC-------------------CC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG-------------------IP 324 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------------------~~ 324 (727)
+|.++.+++.+++++++++++|+++.... ....+........+++........ ..
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK05677 106 NPLYTAREMEHQFNDSGAKALVCLANMAH------LAEKVLPKTGVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPAY 179 (562)
T ss_pred CCCCCHHHHHHHHhccCceEEEEecchhh------hHHHhhhccCcceeEEecccccccchhhhhcccchhhcccccccc
Confidence 99999999999999999999999764321 111111111112222211000000 00
Q ss_pred CCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC--CCC-CCEEE
Q 004860 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKV-GDVYC 401 (727)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~--~~~-~d~~l 401 (727)
..+....+.+.+..... .........++++++|+|||||||+||||+++|++++..+......++ +.. .++++
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK05677 180 HLPQAVKFNDALAKGAG----QPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILI 255 (562)
T ss_pred CCcccccHHHHHhcCCC----CCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEE
Confidence 00112334444433221 111122346799999999999999999999999999876655444333 343 36788
Q ss_pred Eecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeec
Q 004860 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (727)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gG 480 (727)
+..|+.|..++ +.++.++..|++.++.+...++..+++.|+++++|++..+|+++..|.........+++++|.+++||
T Consensus 256 ~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG 335 (562)
T PRK05677 256 APLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGG 335 (562)
T ss_pred EcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcC
Confidence 99999998887 45777888899888877666788999999999999999999999999876544455678999999999
Q ss_pred CCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE--
Q 004860 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-- 558 (727)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-- 558 (727)
++++++..+++.+.+ ++++++.||+||++.++..... .....+++|+|++++.++|+|++++++|.|+. |||++
T Consensus 336 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g 411 (562)
T PRK05677 336 MALQLATAERWKEVT-GCAICEGYGMTETSPVVSVNPS-QAIQVGTIGIPVPSTLCKVIDDDGNELPLGEV--GELCVKG 411 (562)
T ss_pred ccCCHHHHHHHHHHc-CCCeeccCCccccCcceeecCc-cCCCCCccCccCCCCEEEEECCCCCCCCCCCC--eEEEEec
Confidence 999999988887765 6899999999998865543322 23345789999999999999999999999986 99998
Q ss_pred ---ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcC
Q 004860 559 ---FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (727)
Q Consensus 559 ---~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~ 635 (727)
..||+++ ++.+++.|.. ..||+|||+|++++||++++.||+||+||++|++|+|.|||++|. .|
T Consensus 412 ~~~~~gY~~~------~~~t~~~~~~------~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~-~~ 478 (562)
T PRK05677 412 PQVMKGYWQR------PEATDEILDS------DGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLA-AL 478 (562)
T ss_pred CccchhhcCC------chhhhhccCC------CCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHH-hC
Confidence 3466653 3456666643 239999999999999999999999999999999999999999995 99
Q ss_pred CCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHH
Q 004860 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 715 (727)
Q Consensus 636 p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 715 (727)
|+|.+++|+++++...+ +.++++++++++...+.+++++ ++++.|++|++|..|+++++||+|+|||++|++|++
T Consensus 479 ~~v~~~~v~g~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~P~~i~~v~~iP~t~sGKi~r~~L~~ 553 (562)
T PRK05677 479 PGVLQCAAIGVPDEKSG-EAIKVFVVVKPGETLTKEQVME----HMRANLTGYKVPKAVEFRDELPTTNVGKILRRELRD 553 (562)
T ss_pred CCccEEEEEeccCccCC-ceEEEEEEeCCCCCCCHHHHHH----HHHHhhhhccCCcEEEEeccCCCCCcccccHHHHHH
Confidence 99999999999988877 8999999987765566555555 466788999999999999999999999999999999
Q ss_pred HHhhhhc
Q 004860 716 QIKHELS 722 (727)
Q Consensus 716 ~~~~~~~ 722 (727)
++..+..
T Consensus 554 ~~~~~~~ 560 (562)
T PRK05677 554 EELKKAG 560 (562)
T ss_pred HHHHhcc
Confidence 8766543
No 35
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=8e-67 Score=602.46 Aligned_cols=507 Identities=17% Similarity=0.130 Sum_probs=385.4
Q ss_pred CCCCCCceEEEEec-CCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++||++|+.+.- ..+..+.++.+||+||+++++++|++|+++ +++||+|+|+++|+++|+++++||+++|++++|+
T Consensus 54 a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 54 VETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPL 133 (651)
T ss_pred HHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 47899999996421 111223456799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCC----CCCcCcccHHHHhcc
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGI----PLREQDLSWKDFLSS 338 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~ 338 (727)
++.++.+++.+++++++++++|+++... +.........+. ..+++......... .......+|++++..
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~------~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTL------NTLLSCLSEIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQ 207 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHH------HHHHHHhhcCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHh
Confidence 9999999999999999999999987532 112222222222 22222111000000 001123467776654
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHh
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (727)
.... ........++++++|+|||||||.||||++||++++..+.+....+++.++|++++++|++|+++.+.++.+
T Consensus 208 ~~~~----~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h~~~~~~~~~~ 283 (651)
T PLN02736 208 GRSS----PQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAHIYERVNQIVM 283 (651)
T ss_pred cccC----CCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHHHHHHHHHHHH
Confidence 3221 111223467999999999999999999999999999988887778889999999999999999999888899
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC----------------------------CCC-C-
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----------------------------LEG-L- 468 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~----------------------------~~~-~- 468 (727)
|..|+++++.++ ++..+++.|+++++|+++++|++++.|.+... ... .
T Consensus 284 l~~G~~i~~~~~--~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (651)
T PLN02736 284 LHYGVAVGFYQG--DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKNPSPM 361 (651)
T ss_pred HHcCCEEEEeCC--CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCCCCch
Confidence 999999998764 56789999999999999999999988754310 000 0
Q ss_pred -----------Cc-cceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceE
Q 004860 469 -----------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGL 536 (727)
Q Consensus 469 -----------~l-~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~ 536 (727)
.+ ++||.+++||+++++++.+++...+ ++++++.||+||+++.++.... .....+++|+|+||+++
T Consensus 362 ~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~-g~~~~~~YG~TE~~~~~~~~~~-~~~~~~~vG~p~pg~~v 439 (651)
T PLN02736 362 WDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF-GGRVLEGYGMTETSCVISGMDE-GDNLSGHVGSPNPACEV 439 (651)
T ss_pred HHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh-CCCeEEEechHHhchheeccCC-CCCCCCccCCccCceEE
Confidence 01 4899999999999999998887665 5789999999999865543332 23456789999999999
Q ss_pred EEECC-CCCcCCCCCCe-eeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEe
Q 004860 537 VILDE-CGVPYPDDQPC-VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQG 609 (727)
Q Consensus 537 ~vld~-~~~~~p~G~~g-iGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~G 609 (727)
+|+|. ++.....+.++ .|||+| +.||++ +++.|+..|..+ .||+|||+|++|+||+|+|+|
T Consensus 440 ~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~------~~~~t~~~~~~d------gw~~TGDlg~~d~dG~l~i~G 507 (651)
T PLN02736 440 KLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYK------DEVQTREVIDED------GWLHTGDIGLWLPGGRLKIID 507 (651)
T ss_pred EEEEccccCcccCCCCCCCceEEecCCcccccccc------CHHHHHhhhccC------CCeeccceEEEcCCCcEEEEE
Confidence 99983 22211111111 388888 456655 344566666422 399999999999999999999
Q ss_pred ecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC--------CCChH---------
Q 004860 610 RADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------TSQPD--------- 671 (727)
Q Consensus 610 R~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~--------~~~~~--------- 671 (727)
|.||+||+ +|++|+|.|||++|. .||.|.+|+|++. ..+ +.++|+|+++++. ..+.+
T Consensus 508 R~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~---~~~-~~~~A~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (651)
T PLN02736 508 RKKNIFKLAQGEYIAPEKIENVYA-KCKFVAQCFVYGD---SLN-SSLVAVVVVDPEVLKAWAASEGIKYEDLKQLCNDP 582 (651)
T ss_pred echhheEcCCCcEechHHHHHHHh-cCCCeeEEEEEec---CCC-ceeEEEEEeCHHHHHHHHHHcCCCccCHHHHhcCH
Confidence 99999997 699999999999995 8999999999982 244 7899999987531 12212
Q ss_pred HHHHHHHHHHH-----hhcCCCcccceEEEcCCCC------CCCCchhhHHHHHHHHhhhhcc
Q 004860 672 KLKMIFSKAIQ-----SKLNPLFKVSLVKVVPEFP------RTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 672 ~l~~~l~~~l~-----~~L~~~~~P~~i~~v~~lP------~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
++++.+.+.++ ..|+.|++|++|+++++.| +|++||++|+.|++.+.+++++
T Consensus 583 ~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lT~~~Ki~R~~i~~~~~~~i~~ 645 (651)
T PLN02736 583 RVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGLLTPTFKVKRPQAKAYFAKAISD 645 (651)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 22333333332 3699999999999999886 7999999999999999888764
No 36
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=4.4e-66 Score=585.12 Aligned_cols=487 Identities=21% Similarity=0.251 Sum_probs=394.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+++||++|+++.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 34 ~~~~~~~a~~~~~~~------~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 34 SEFSDRPCLIDGATG------RVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANP 107 (537)
T ss_pred HhCCCCeEEEecCCC------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcCEEEecCCC
Confidence 578999999875321 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
.++.+++..++++++++++|+++... .............++.+.... .....+.++......
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~---- 169 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYV------DKLKGLAEDDGVTVVTIDDPP--------EGCLHFSELTQADEN---- 169 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchH------HHHHHHhhcCCceEEEeCCCC--------CCceeHHHHhcCCCC----
Confidence 99999999999999999999987532 111111111111222222110 122334444332211
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch----hcCCCCCCEEEEecccccccch-HHhHHhhh
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA----HIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~----~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~ 420 (727)
..+.....+++++|++|||||||.||||+++|+++++.+.+... .+++.++|++++.+|+.|++++ ..++.++.
T Consensus 170 -~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~ 248 (537)
T PLN02246 170 -ELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNSVLLCGLR 248 (537)
T ss_pred -CCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHHHHHHHHh
Confidence 11223456799999999999999999999999999877654432 5678999999999999999987 44678899
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
.|+++++.+. .++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||++++++..+++.+.++++.+
T Consensus 249 ~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~ 327 (537)
T PLN02246 249 VGAAILIMPK-FEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFRAKLPNAVL 327 (537)
T ss_pred cCCEEEEeCC-CCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHHHHcCCCeE
Confidence 9999999864 577899999999999999999999999987655555678899999999999999999999998888889
Q ss_pred cccccccccccccccCCC----CCCccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCcccc
Q 004860 501 IESCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLL 570 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~ 570 (727)
++.||+||++.+++.... ......+++|+|+++++++|+| ++++++|.|+. |||++ ..||++.+
T Consensus 328 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~GY~~~~---- 401 (537)
T PLN02246 328 GQGYGMTEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRNQP--GEICIRGPQIMKGYLNDP---- 401 (537)
T ss_pred eccccccccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCCCc--eEEEEECCchhccccCCc----
Confidence 999999999865433211 1123446799999999999999 57999999996 99998 34555533
Q ss_pred ccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCC
Q 004860 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (727)
Q Consensus 571 ~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~ 650 (727)
+.++..|.. ..||+|||+|++++||+++++||+||+||++|+||+|.|||++|. .||+|.+++|++.++..
T Consensus 402 --~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~~~~~~~ 472 (537)
T PLN02246 402 --EATANTIDK------DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLI-SHPSIADAAVVPMKDEV 472 (537)
T ss_pred --hhhhhcccC------CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHH-hCCCeeEEEEEcccCcc
Confidence 344444432 249999999999999999999999999999999999999999996 89999999999988887
Q ss_pred CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 651 ~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
.+ +.++++++..++...+.++ |++.++++|++|++|..++++++||+|+|||++|++|++++.+
T Consensus 473 ~~-~~~~~~v~~~~~~~~~~~~----l~~~l~~~l~~~~~p~~i~~~~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 473 AG-EVPVAFVVRSNGSEITEDE----IKQFVAKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred CC-ceeEEEEEeCCCCCCCHHH----HHHHHHhhCcCccccceEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 77 8999999988765555444 4455778899999999999999999999999999999998753
No 37
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.8e-66 Score=584.47 Aligned_cols=495 Identities=21% Similarity=0.239 Sum_probs=400.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++|+++|+++.+. ++||+||.++++++|..|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 20 a~~~~~~~a~~~~~~--------~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 91 (546)
T PRK08314 20 ARRYPDKTAIVFYGR--------AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAILRANAVVVPV 91 (546)
T ss_pred HHHcCCCcceeecCc--------eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHHHHcCcEEeec
Confidence 368999999999877 999999999999999999986 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc-EEEEcCCCC---CCC--------------CCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGN---DVG--------------IPL 325 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~---~~~--------------~~~ 325 (727)
+|.++.+++.+++++++++++++++.... ............ .++...... ... ...
T Consensus 92 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (546)
T PRK08314 92 NPMNREEELAHYVTDSGARVAIVGSELAP------KVAPAVGNLRLRHVIVAQYSDYLPAEPEIAVPAWLRAEPPLQALA 165 (546)
T ss_pred CcCcCHHHHHHHHHhCCCeEEEEccchhh------hHHHHhhccCcceEEEecchhhcccccccCccccccccccccccc
Confidence 99999999999999999999999875431 111111111111 111110000 000 000
Q ss_pred CcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecc
Q 004860 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTN 405 (727)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~ 405 (727)
..+...|.+....... .......++++++|+|||||||.||||+++|+++++.+......+++.++|++++..|
T Consensus 166 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p 239 (546)
T PRK08314 166 PGGVVAWKEALAAGLA------PPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVLAVLP 239 (546)
T ss_pred ccccccHHHHhcccCC------CCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEEEEcC
Confidence 1123456555443211 1223446789999999999999999999999999998888777888999999999999
Q ss_pred cccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCC
Q 004860 406 LGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSN 484 (727)
Q Consensus 406 ~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~ 484 (727)
+.|..++ +.++.++.+|+++++.+. .++..++++++++++|++.++|+++..++........+++++|.+++||++++
T Consensus 240 ~~~~~g~~~~~~~~l~~G~~i~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~ 318 (546)
T PRK08314 240 LFHVTGMVHSMNAPIYAGATVVLMPR-WDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGAAMP 318 (546)
T ss_pred chHHHHHHHHHHHHHHcCCeEEecCC-CCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccccCC
Confidence 9999987 557889999999999873 57788999999999999999999999998765555567889999999999999
Q ss_pred hhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----
Q 004860 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL----- 558 (727)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v----- 558 (727)
++..+++.+.+ +.++++.||+||++........ .....+++|+|+++++++|+| +++++++.|.. |||++
T Consensus 319 ~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~ 394 (546)
T PRK08314 319 EAVAERLKELT-GLDYVEGYGLTETMAQTHSNPP-DRPKLQCLGIPTFGVDARVIDPETLEELPPGEV--GEIVVHGPQV 394 (546)
T ss_pred HHHHHHHHHHc-CCcEEecccccccccceecCCC-cCCCCCccCcccCCeEEEEEeCCCCcCCCCCCc--eEEEEECCch
Confidence 99998888776 5789999999999865443322 223456899999999999999 46899999985 99998
Q ss_pred ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCc
Q 004860 559 FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (727)
Q Consensus 559 ~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V 638 (727)
..||++. ++.++..|..+ +|.+||+|||+|+++++|+++++||+||+||++|++|+|.|||++|. ++|+|
T Consensus 395 ~~gY~~~------~~~t~~~f~~~---~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~-~~~~v 464 (546)
T PRK08314 395 FKGYWNR------PEATAEAFIEI---DGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLY-KHPAI 464 (546)
T ss_pred hccccCC------hhHhhhhhhhc---CCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHH-hCcch
Confidence 3455553 33455555432 35569999999999999999999999999999999999999999995 89999
Q ss_pred eeeEEEeecCCCCCceEEEEEEEecCCCC--CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHH
Q 004860 639 LETAAISVSPAGGGPEVLVIFVVLKKGFT--SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 639 ~~a~vv~~~~~~~~~~~l~a~vv~~~~~~--~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 716 (727)
.+++|++.++...+ +.+++|++++++.. .+.+ .+++++++.|++|++|..++++++||+|+|||++|+.|++.
T Consensus 465 ~~~~v~~~~~~~~~-~~~~a~v~~~~~~~~~~~~~----~l~~~~~~~l~~~~~P~~~~~v~~iP~t~~GKv~r~~L~~~ 539 (546)
T PRK08314 465 QEACVIATPDPRRG-ETVKAVVVLRPEARGKTTEE----EIIAWAREHMAAYKYPRIVEFVDSLPKSGSGKILWRQLQEQ 539 (546)
T ss_pred heEEEEeCCCcccC-ceeEEEEEECCCCCCCCCHH----HHHHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHH
Confidence 99999999988777 89999999887543 2323 45556778999999999999999999999999999999886
Q ss_pred Hhhh
Q 004860 717 IKHE 720 (727)
Q Consensus 717 ~~~~ 720 (727)
.+..
T Consensus 540 ~~~~ 543 (546)
T PRK08314 540 EKAR 543 (546)
T ss_pred Hhhh
Confidence 6543
No 38
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=5.1e-66 Score=586.78 Aligned_cols=497 Identities=16% Similarity=0.153 Sum_probs=387.6
Q ss_pred CCCCCCceEEEEecCCC--CCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEee
Q 004860 186 RRKEDNTVAIVWREDRC--DESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~--~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vp 262 (727)
++++||++|+++.+... ....++++||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|
T Consensus 16 a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~~la~~~~G~~~v~ 95 (552)
T PRK09274 16 AQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFALTFALFKAGAVPVL 95 (552)
T ss_pred HHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCeEEEE
Confidence 36799999999865411 012234799999999999999999999 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhC-C--CcEEEEcCCCCCCCCCCCcCcccHHHHhccc
Q 004860 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (727)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (727)
++|.++.+++.+++++++++++|+++... ....+.... . ...+.+... .......+.++....
T Consensus 96 l~~~~~~~~l~~~l~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~~~~~~~~~~ 161 (552)
T PRK09274 96 VDPGMGIKNLKQCLAEAQPDAFIGIPKAH-------LARRLFGWGKPSVRRLVTVGGR-------LLWGGTTLATLLRDG 161 (552)
T ss_pred cCCCccHHHHHHHHHhcCCCEEEeccHHH-------HHHHHhccCccchhheeccccc-------cccCCccHHHhcccC
Confidence 99999999999999999999999865210 001111000 0 011111100 001122455543221
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhh
Q 004860 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (727)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 419 (727)
.. .........++++++|+|||||||.||||+++|+++.+.+.+....+++.++|++++..|+.+. ..+
T Consensus 162 ~~----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~-------~~~ 230 (552)
T PRK09274 162 AA----APFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFAL-------FGP 230 (552)
T ss_pred cc----ccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHh-------hhh
Confidence 11 1112233467899999999999999999999999999988887788899999999888776543 234
Q ss_pred hcCcEEEEecC------CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHh
Q 004860 420 LNGATLALYQG------SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSS 493 (727)
Q Consensus 420 ~~G~~lv~~~~------~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~ 493 (727)
..|+++++.+. ..++..+++.|+++++|+++++|++++.|.+.......++++||.+++||++++++..+++.+
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~ 310 (552)
T PRK09274 231 ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAPVPIAVIERFRA 310 (552)
T ss_pred hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCcCCHHHHHHHHH
Confidence 56888887642 346789999999999999999999999998865545567899999999999999999999988
Q ss_pred hCC-CCcccccccccccccccccCCCC---------CCccccccccCCCCceEEEECC---------CCCcCCCCCCeee
Q 004860 494 KAW-YNAIIESCGGTELSSAYIQGSLL---------QPQAFGAFSTATMTAGLVILDE---------CGVPYPDDQPCVG 554 (727)
Q Consensus 494 ~~~-~~~l~n~YG~TE~~~~~~~~~~~---------~~~~~~~iG~p~~~~~~~vld~---------~~~~~p~G~~giG 554 (727)
.++ +++++|.||+||++.+++..... ......++|+|+++++++|+|+ ++++++.|+. |
T Consensus 311 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~~~~~~~~~g~~--G 388 (552)
T PRK09274 311 MLPPDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEWDDALRLATGEI--G 388 (552)
T ss_pred HcCCCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccccccccCCCCCe--e
Confidence 876 47999999999998654332211 1112247899999999999994 5678999985 9
Q ss_pred eEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHH
Q 004860 555 EVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIER 629 (727)
Q Consensus 555 el~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~ 629 (727)
||++ ..||++.+ +.+...|..++ .|.+||+|||+|++|+||+++++||.||+||++|++|+|.|||+
T Consensus 389 el~v~g~~~~~GY~~~~------~~t~~~~~~~~--~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~ 460 (552)
T PRK09274 389 EIVVAGPMVTRSYYNRP------EATRLAKIPDG--QGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYTIPCER 460 (552)
T ss_pred EEEEecCcccccccCCh------HHhhhhhcccC--CCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECcHHHHH
Confidence 9998 35666543 34444443222 23369999999999999999999999999999999999999999
Q ss_pred HHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCC--CCch
Q 004860 630 VCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRT--ASNK 707 (727)
Q Consensus 630 ~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t--~~GK 707 (727)
+|. +||+|.+|+|++.+++. + +.++++|+++++...+.+++.+++++.++.. +.++.|..++++++||+| +|||
T Consensus 461 ~l~-~~p~V~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~~~~lP~t~~~~GK 536 (552)
T PRK09274 461 IFN-THPGVKRSALVGVGVPG-A-QRPVLCVELEPGVACSKSALYQELRALAAAH-PHTAGIERFLIHPSFPVDIRHNAK 536 (552)
T ss_pred HHH-hCcccceeEEEEeCCCC-C-ceEEEEEEccCccccchHHHhhhhHHHHHhc-CCCcceeEEeccCCCCcccccccc
Confidence 995 99999999999998753 4 6899999998877666677888888776544 567888999999999999 7999
Q ss_pred hhHHHHHHHHhhhh
Q 004860 708 LLRRVLRDQIKHEL 721 (727)
Q Consensus 708 vdR~~L~~~~~~~~ 721 (727)
|||++|+++++..+
T Consensus 537 i~r~~L~~~~~~~~ 550 (552)
T PRK09274 537 IFREKLAVWAAKQL 550 (552)
T ss_pred ccHHHHHHHHHHhh
Confidence 99999999887664
No 39
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-65 Score=575.75 Aligned_cols=488 Identities=25% Similarity=0.291 Sum_probs=400.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+||++|+++.+. ++||+||.+++.++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 15 ~~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~ 86 (513)
T PRK07656 15 ARRFGDKEAYVFGDQ--------RLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAVVVPLN 86 (513)
T ss_pred HHHCCCCeEEEeCCC--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 367899999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
|.++.+++..++++++++++++++.... .........+. ..+++...... ........+|.++......
T Consensus 87 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 156 (513)
T PRK07656 87 TRYTADEAAYILARGDAKALFVLGLFLG------VDYSATTRLPALEHVVICETEED--DPHTEKMKTFTDFLAAGDP-- 156 (513)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhHH------HHHHHHhccCCccEEEEEcCccc--ccCccccccHHHHHhcCCC--
Confidence 9999999999999999999999875331 11111122222 12222111111 0011123457776543321
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcC
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G 422 (727)
........++++++|+|||||||.||+|.++|+++.+.+......++++++|++++..|+.|++++ +.++.++..|
T Consensus 157 ---~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G 233 (513)
T PRK07656 157 ---AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRG 233 (513)
T ss_pred ---CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHHHHHcC
Confidence 112234567899999999999999999999999999888887788899999999999999999987 4578899999
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
+++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+++++++.+++.+.++...++|
T Consensus 234 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~ 312 (513)
T PRK07656 234 ATILPLP-VFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVDIVLT 312 (513)
T ss_pred ceEEecC-cCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCCceEe
Confidence 9998865 457889999999999999999999999999876666667899999999999999999998888775338999
Q ss_pred cccccccccccccCCCCCCcc--ccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccc
Q 004860 503 SCGGTELSSAYIQGSLLQPQA--FGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~--~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~ 575 (727)
.||+||++++.+.+....... .+++|+|++++.++|+|+++++++.|+. |||++ ..||++.+ ..+
T Consensus 313 ~YG~tE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~------~~~ 384 (513)
T PRK07656 313 GYGLSEASGVTTFNRLDDDRKTVAGTIGTAIAGVENKIVNELGEEVPVGEV--GELLVRGPNVMKGYYDDP------EAT 384 (513)
T ss_pred EEccccCCCceeecCccccccccCCCccccCCCcEEEEECCCCCCCCCCCc--eEEEEEcchhhhhhcCCH------HHH
Confidence 999999987665544332222 5789999999999999999999999986 99998 34555532 234
Q ss_pred cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceE
Q 004860 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (727)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~ 655 (727)
...|.. ..||+|||+|++++||+++++||.||+||++|.+|+|.+||++|. ++|+|.+++|++.++...+ +.
T Consensus 385 ~~~~~~------~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~i~~~~v~~~~~~~~g-~~ 456 (513)
T PRK07656 385 AAAIDA------DGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLY-EHPAVAEAAVIGVPDERLG-EV 456 (513)
T ss_pred hhhhcc------CCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHH-hCCCeeEEEEEecCCcccC-ce
Confidence 434431 239999999999999999999999999999999999999999995 8999999999999888777 88
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHH
Q 004860 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 715 (727)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 715 (727)
+++||+.+++...+.+++.+ .+++.|++|++|..++++++||+|++||++|+.|++
T Consensus 457 ~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~p~~i~~v~~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 457 GKAYVVLKPGAELTEEELIA----YCREHLAKYKVPRSIEFLDELPKNATGKVLKRALRE 512 (513)
T ss_pred EEEEEEECCCCCCCHHHHHH----HHHhhcccccCCCEEEEecCCCCCCccceeHHHHhc
Confidence 99999987655556555554 477889999999999999999999999999999975
No 40
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6e-66 Score=593.49 Aligned_cols=502 Identities=16% Similarity=0.165 Sum_probs=377.7
Q ss_pred CCCCCCceEEEEecC-CCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++||++|+.+.+. .+..+.+..+||+||+++++++|++|+++ +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 55 a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl 134 (666)
T PLN02614 55 VEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPL 134 (666)
T ss_pred HHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEe
Confidence 478999999986421 01112345689999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC------CcEEEEcCCCCCCC--C-CCCcCcccHHH
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP------LKAIVLPAIGNDVG--I-PLREQDLSWKD 334 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~--~-~~~~~~~~~~~ 334 (727)
+|.++.+++.+++++++++++|+++... ..+....+ ..++++........ . .......+|++
T Consensus 135 ~~~~~~~~l~~il~~~~~~~vi~~~~~~---------~~~~~~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (666)
T PLN02614 135 YDTLGAGAVEFIISHSEVSIVFVEEKKI---------SELFKTCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDE 205 (666)
T ss_pred cCCCCHHHHHHHHhccCCCEEEECHHHH---------HHHHHhcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHH
Confidence 9999999999999999999999986421 12222111 12222221100000 0 00011245666
Q ss_pred HhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhc-----CCCCCCEEEEecccccc
Q 004860 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-----DLKVGDVYCWPTNLGWV 409 (727)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~~~ 409 (727)
++...... ........++|+++|+|||||||.||||++||+++++.+.+....+ +++++|++++++|++|.
T Consensus 206 ~~~~~~~~----~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~ 281 (666)
T PLN02614 206 FLKLGEGK----QYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHI 281 (666)
T ss_pred HHhhcccC----CCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHHHH
Confidence 65433210 0111223579999999999999999999999999988776544332 57899999999999998
Q ss_pred cchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC-------------------------
Q 004860 410 MGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC------------------------- 464 (727)
Q Consensus 410 ~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~------------------------- 464 (727)
++....+.++..|+++++.+ .++..+++.|+++++|+++++|++++.|.....
T Consensus 282 ~~~~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 359 (666)
T PLN02614 282 FDRVIEECFIQHGAAIGFWR--GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNM 359 (666)
T ss_pred HHHHHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence 88755566788999998875 367899999999999999999999998764210
Q ss_pred --------CCC-----------CCc-cceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccc
Q 004860 465 --------LEG-----------LDW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAF 524 (727)
Q Consensus 465 --------~~~-----------~~l-~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~ 524 (727)
..+ ..+ ++||.+++||+++++.. ..+...+++++++|.||+||+++..+...+......
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 438 (666)
T PLN02614 360 KKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFLRVVACCHVLQGYGLTESCAGTFVSLPDELDML 438 (666)
T ss_pred HcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHHHHhcCCCEEeeCchHhhhhheeeeccccCCcC
Confidence 000 001 58999999999999875 445555656899999999999764433322222346
Q ss_pred cccccCCCCceEEEEC-CC--CCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCce
Q 004860 525 GAFSTATMTAGLVILD-EC--GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDI 596 (727)
Q Consensus 525 ~~iG~p~~~~~~~vld-~~--~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl 596 (727)
+++|+|+||++++|+| ++ ++++|.|+. |||+| +.||++ +++.|++.|. +| ||+|||+
T Consensus 439 gsvG~p~pg~evki~d~~~~~~~~~~~g~~--GEl~vrGp~v~~GY~~------~pe~T~~~f~-----dG--w~~TGDl 503 (666)
T PLN02614 439 GTVGPPVPNVDIRLESVPEMEYDALASTPR--GEICIRGKTLFSGYYK------REDLTKEVLI-----DG--WLHTGDV 503 (666)
T ss_pred CcccCcCCceEEEEeeecccCcccCCCCCC--ceEEEcCCcccccccC------CHHHhhhhhc-----cC--CcccceE
Confidence 7899999999999998 33 478899986 99998 345555 4456777773 13 9999999
Q ss_pred EEEecCceEEEEeecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC---------
Q 004860 597 IKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF--------- 666 (727)
Q Consensus 597 ~~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~--------- 666 (727)
|++|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+|+|++... . ..++|+|++....
T Consensus 504 g~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~-~~p~V~~~~V~g~~~---~-~~l~alvv~~~~~~~~~~~~~~ 578 (666)
T PLN02614 504 GEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYG-EVQAVDSVWVYGNSF---E-SFLVAIANPNQQILERWAAENG 578 (666)
T ss_pred EEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHh-cCCCeeEEEEEecCC---c-ceEEEEEeCCHHHHHHHHHhcC
Confidence 999999999999999999996 699999999999995 999999999998642 1 5799999986421
Q ss_pred -CCC------hHHHHHHHHHHH-----HhhcCCCcccceEEEcCC-C-----CCCCCchhhHHHHHHHHhhhhcc
Q 004860 667 -TSQ------PDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPE-F-----PRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 667 -~~~------~~~l~~~l~~~l-----~~~L~~~~~P~~i~~v~~-l-----P~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
..+ ..++++.+.+.+ ++.|+.|.+++.|.++++ + -+||++|+.|+.+.+.|++.+++
T Consensus 579 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~l~~~~f~~~ng~lTpt~K~kR~~i~~~y~~~i~~ 653 (666)
T PLN02614 579 VSGDYNALCQNEKAKEFILGELVKMAKEKKMKGFEIIKAIHLDPVPFDMERDLLTPTFKKKRPQLLKYYQSVIDE 653 (666)
T ss_pred CCcCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCCcCCcCCHhhhhhHHHHHHHHHHHHHH
Confidence 101 123444444433 467999999999998863 3 39999999999999999888764
No 41
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-65 Score=579.53 Aligned_cols=489 Identities=16% Similarity=0.220 Sum_probs=381.3
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+|+++|+++|+++.+.. ..+||+||+++++++|+.|.+. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 23 ~a~~~p~~~a~~~~~~~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~~G~v~v~l 96 (540)
T PRK05857 23 QARQQPEAIALRRCDGT------SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAKLGAIAVMA 96 (540)
T ss_pred HHhhCCCcEEEeecCCC------ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEec
Confidence 34689999999865431 3799999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
+++++.+++.++++.++++++|+++........+. ..... ...+.+...... .. +.+.....
T Consensus 97 ~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~--------~~-~~~~~~~~---- 158 (540)
T PRK05857 97 DGNLPIAAIERFCQITDPAAALVAPGSKMASSAVP---EALHS--IPVIAVDIAAVT--------RE-SEHSLDAA---- 158 (540)
T ss_pred CccCCHHHHHHHHHhcCCceEEEeccchhcccccc---ccccc--cceeEeeccccc--------cc-cccccccc----
Confidence 99999999999999999999999876432111111 00000 011222111000 00 00000000
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc----hhcCCCCCCEEEEecccccccchHHhHHhh
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 419 (727)
.........+++++|++|||||||.||||+++|+++.+...... ..++...+++++...|+.|+.+++..+.++
T Consensus 159 --~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~~~~~~l 236 (540)
T PRK05857 159 --SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLWWILTCL 236 (540)
T ss_pred --ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHHHHHHHh
Confidence 00111234668999999999999999999999999876543321 224566788999999999999998888999
Q ss_pred hcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCc
Q 004860 420 LNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (727)
Q Consensus 420 ~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (727)
+.|+++++. ..++..++++|+++++|+++++|++++.|.+.......+++++|.+++||++++....+++. .+ +++
T Consensus 237 ~~G~~~v~~--~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~-~~-g~~ 312 (540)
T PRK05857 237 MHGGLCVTG--GENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFIE-AT-GVR 312 (540)
T ss_pred hcceeEEec--CCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHHH-Hh-CCe
Confidence 999998763 34667899999999999999999999999887655556789999999999999877765443 43 689
Q ss_pred ccccccccccccccccCCCCC----CccccccccCCCCceEEEECCCCCc-C-----CCCCCeeeeEEEe-----cccCC
Q 004860 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILDECGVP-Y-----PDDQPCVGEVGLF-----PLYLG 564 (727)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~vld~~~~~-~-----p~G~~giGel~v~-----~~y~~ 564 (727)
+++.||+||++.......... ....+++|+|++|++++|+|++++. + |.|+ +|||+|. .||++
T Consensus 313 i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~--~Gel~v~g~~~~~GY~~ 390 (540)
T PRK05857 313 TAQVYGLSETGCTALCLPTDDGSIVKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSAS--FGTLWIKSPANMLGYWN 390 (540)
T ss_pred eecccCCCcCCceeeecccccccccccccCCcCcccCCcEEEEECccccCccccccCCCCC--cceEEEeCcchhhhhhC
Confidence 999999999985433222111 1235789999999999999987763 3 3455 4999983 45555
Q ss_pred CCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEE
Q 004860 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (727)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv 644 (727)
+++.+.+.|. .| ||+|||+|++|+||++++.||.||+||++|++|+|.|||++|. .||+|.+|+|+
T Consensus 391 ------~~~~t~~~~~-----~g--~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~V~~~~v~ 456 (540)
T PRK05857 391 ------NPERTAEVLI-----DG--WVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAE-GVSGVREAACY 456 (540)
T ss_pred ------CccchhhhcC-----CC--ceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHH-hCCCeeEEEEE
Confidence 3335555553 23 9999999999999999999999999999999999999999996 99999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCC-CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 645 SVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 645 ~~~~~~~~~~~l~a~vv~~~~~~-~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+.++...+ +.++++++..++.. ...+++.+.+++.+++.|++|++|..++++++||+|+|||+||++|++++.+.
T Consensus 457 ~~~~~~~~-~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 457 EIPDEEFG-ALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPRTQSGKVMRASLAAAATAD 532 (540)
T ss_pred ecCccccc-cceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCCCCCcceeHHHHHHhhhhc
Confidence 99987776 78888888765322 12356788888888999999999999999999999999999999999988754
No 42
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3e-65 Score=571.51 Aligned_cols=467 Identities=21% Similarity=0.223 Sum_probs=382.0
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
++++||++|+++.+. ++||+||.++++++|++|.+...+|++|+|+++|++++++++|||+++|++++|++|
T Consensus 11 a~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 82 (487)
T PRK07638 11 ASLQPNKIAIKENDR--------VLTYKDWFESVCKVANWLNEKESKNKTIAILLENRIEFLQLFAGAAMAGWTCVPLDI 82 (487)
T ss_pred HHhCCCCeEEecCCc--------EeeHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCc
Confidence 468999999998776 999999999999999999988348999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
.++.+++.+++++++++++++++...... .. ....++.+. .+.+.......
T Consensus 83 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~~---------~~-~~~~~~~~~---------------~~~~~~~~~~~---- 133 (487)
T PRK07638 83 KWKQDELKERLAISNADMIVTERYKLNDL---------PD-EEGRVIEID---------------EWKRMIEKYLP---- 133 (487)
T ss_pred cCCHHHHHHHHHhCCCCEEEEecccccch---------hh-ccceEEEeh---------------hhhhhhhhccc----
Confidence 99999999999999999999987432111 00 001111110 11111111110
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEE
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~l 425 (727)
.........+++++|+|||||||.||||+++|++++..+......+++.++|+++...++.|+.+++.++.++..|+++
T Consensus 134 -~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~ 212 (487)
T PRK07638 134 -TYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTV 212 (487)
T ss_pred -cccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEE
Confidence 0111122357789999999999999999999999998888777788899999999999999998888888999999999
Q ss_pred EEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccc
Q 004860 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (727)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (727)
++.+ ..++..+++.|+++++|++.++|+++..|.+... . ..+.+.++++|+.++++...++...+++++++|.||
T Consensus 213 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~---~-~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG 287 (487)
T PRK07638 213 HLMR-KFIPNQVLDKLETENISVMYTVPTMLESLYKENR---V-IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYG 287 (487)
T ss_pred EEcC-CCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCcC---c-CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEec
Confidence 9875 5688999999999999999999999999987632 2 345566788899999999999988888899999999
Q ss_pred ccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCcccccccccccccc
Q 004860 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFR 580 (727)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~~~~f~ 580 (727)
+||++..+...........+++|+|++++.++|+|++|+++|.|+. |||++. .||++++ ..+...+
T Consensus 288 ~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~g~~~~~g~~--Gel~v~~~~~~~gy~~~~------~~~~~~~- 358 (487)
T PRK07638 288 ASELSFVTALVDEESERRPNSVGRPFHNVQVRICNEAGEEVQKGEI--GTVYVKSPQFFMGYIIGG------VLARELN- 358 (487)
T ss_pred CCccCceEEecccccCCCCCCCCcccCCcEEEEECCCCCCCCCCCC--eEEEEecccceeeecCCH------HHHhhhc-
Confidence 9999876544433333456789999999999999999999999986 999983 4454432 2222221
Q ss_pred ccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEE
Q 004860 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (727)
Q Consensus 581 ~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~v 660 (727)
...||+|||+|++|+||+++++||+||+||++|.+|+|.|||++|. .||+|.+++|++.+++..+ +.+++++
T Consensus 359 ------~~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v 430 (487)
T PRK07638 359 ------ADGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLH-EHPAVDEIVVIGVPDSYWG-EKPVAII 430 (487)
T ss_pred ------cCCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHH-hCCCeeeEEEEecCchhcC-CeeEEEE
Confidence 1239999999999999999999999999999999999999999996 8999999999999988777 8888888
Q ss_pred EecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 661 VLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+.. .+.++++ +.+++.|++|++|..++++++||+|++||++|++|++++.+.
T Consensus 431 ~~~----~~~~~l~----~~~~~~l~~~~~p~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 482 (487)
T PRK07638 431 KGS----ATKQQLK----SFCLQRLSSFKIPKEWHFVDEIPYTNSGKIARMEAKSWIENQ 482 (487)
T ss_pred ECC----CCHHHHH----HHHHHHhhcccCCcEEEEecccCCCCcccccHHHHHHHHhcc
Confidence 742 3334444 456778899999999999999999999999999999887654
No 43
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.4e-65 Score=569.39 Aligned_cols=475 Identities=21% Similarity=0.222 Sum_probs=390.4
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEee
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vp 262 (727)
+|+.+||++|+++.+. .+||+||.++++++|++|++ . +++|++|+++++|++++++++|||+++|++++|
T Consensus 11 ~a~~~p~~~a~~~~~~--------~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 11 RAYLHPDRIAIITEEE--------EMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred HHHHCCCCeEEEECCc--------eEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 3478999999998766 99999999999999999986 6 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC-CcEEEEcCCCCCCCCCCCcCcccHHHHhcccCC
Q 004860 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (727)
+++.++.+++..++++++++++++++.... ....+..... ...+.+. ++.+.......
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 141 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQN------MALSMQKVSYVQRVISIT---------------SLKEIEDRKID 141 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHH------HHHHhhhccCcceEEEec---------------chHhhhccCCC
Confidence 999999999999999999999999875421 1111111111 1111111 12222221111
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchH-HhHHhhh
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFL 420 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~ 420 (727)
......++++++++|||||||.||+|+++|+++..........+++.++|++++.+|+.|..++. .++.++.
T Consensus 142 -------~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 214 (496)
T PRK06839 142 -------NFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLF 214 (496)
T ss_pred -------CCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHh
Confidence 11233568999999999999999999999999877666666677899999999999999998874 4578899
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
.|+++++.+ ..++..++++++++++|++.++|++++.|+........+++++|.+++||+++++...+++... ++++
T Consensus 215 ~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~--g~~~ 291 (496)
T PRK06839 215 AGGVIIVPR-KFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDR--GFLF 291 (496)
T ss_pred cCcEEEEcc-CCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHh--CCee
Confidence 999998865 5688899999999999999999999999998766556678999999999999999998888765 6889
Q ss_pred cccccccccccccccCCC-CCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCcccccccc
Q 004860 501 IESCGGTELSSAYIQGSL-LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADH 574 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~ 574 (727)
++.||+||++.+++.... ......+++|+|++++.++|+|++++++|.|+. |||+|. .||++. ++.
T Consensus 292 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~------~~~ 363 (496)
T PRK06839 292 GQGFGMTETSPTVFMLSEEDARRKVGSIGKPVLFCDYELIDENKNKVEVGEV--GELLIRGPNVMKEYWNR------PDA 363 (496)
T ss_pred EeeccCCCCCcceEecccccccccCCCCcccCCCceEEEECCCcCCCCCCCc--eEEEEECCCcchhhcCC------hHH
Confidence 999999999864433322 223446789999999999999999999999986 999983 455543 233
Q ss_pred ccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCce
Q 004860 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (727)
Q Consensus 575 ~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~ 654 (727)
+...+. +| ||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .+|+|.+++|++.+++..+ +
T Consensus 364 ~~~~~~-----~g--~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~ 434 (496)
T PRK06839 364 TEETIQ-----DG--WLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVIN-KLSDVYEVAVVGRQHVKWG-E 434 (496)
T ss_pred HHHHHc-----CC--CeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-c
Confidence 333332 12 8999999999999999999999999999999999999999996 8999999999999998887 8
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
.++++|+++++...+.+++ ++++++.|++|++|..|++++++|+|+|||++|++|+++.++
T Consensus 435 ~~~~~v~~~~~~~~~~~~l----~~~~~~~l~~~~~P~~~~~v~~~P~t~~GKi~r~~l~~~~~~ 495 (496)
T PRK06839 435 IPIAFIVKKSSSVLIEKDV----IEHCRLFLAKYKIPKEIVFLKELPKNATGKIQKAQLVNQLKS 495 (496)
T ss_pred eEEEEEEECCCCCCCHHHH----HHHHHhhCcCCCCCcEEEEeccCCCCccccccHHHHHHHhhc
Confidence 9999999987665555544 445778899999999999999999999999999999988754
No 44
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.6e-65 Score=578.08 Aligned_cols=471 Identities=18% Similarity=0.138 Sum_probs=362.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
++++|+++|+++.+. +.++++||+||+++++++|++|.++ ++||+|+|+++|++++++++|||+++|++++ ++|
T Consensus 12 ~~~~~~~~a~~~~~~----~~~~~~ty~el~~~~~~lA~~L~~~-~~g~~V~l~~~~~~e~~~~~la~~~~G~~~~-~~~ 85 (525)
T PRK05851 12 MTASGRDLVVLDRES----GLWRRHPWPEVHGRAENVAARLLDR-DRPGAVGLVGEPTVELVAAIQGAWLAGAAVS-ILP 85 (525)
T ss_pred hcCCCCceEEeCCCC----CcceeecHHHHHHHHHHHHHHHHhc-CCCCeEEEEcCCCHHHHHHHHHHHHcCCCCc-CCC
Confidence 478899999998653 2456999999999999999999988 8999999999999999999999999999865 444
Q ss_pred C--------CCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhc
Q 004860 266 S--------FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (727)
Q Consensus 266 ~--------~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 337 (727)
. ...+++.+++++++++++|+++... ..+..... . +.+. ++.....
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~---------~~~~~~~~-~-~~~~---------------~~~~~~~ 139 (525)
T PRK05851 86 GPVRGADDGRWADATLTRFAGIGVRTVLSHGSHL---------ERLRAVDS-S-VTVH---------------DLATAAH 139 (525)
T ss_pred CCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHH---------HHHHHhhc-c-cccc---------------ccccccc
Confidence 2 2335666789999999999986432 11111100 0 0000 0000000
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCC-CCCEEEEecccccccchHHhH
Q 004860 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK-VGDVYCWPTNLGWVMGPVILF 416 (727)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~-~~d~~l~~~~~~~~~~~~~~~ 416 (727)
.. . . .......+++++||+|||||||.||||+++|+++++.+.+....++++ ++|++++.+|++|+++++.++
T Consensus 140 ~~-~---~--~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 213 (525)
T PRK05851 140 TN-R---S--ASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLAFLL 213 (525)
T ss_pred cc-c---c--ccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHHHHH
Confidence 00 0 0 001123578999999999999999999999999999888887888898 999999999999999998889
Q ss_pred HhhhcCcEEEEecCC-C--ChhhHHHHHHHhCCCEEEechHHHHHHHhcC-CCCCCCccceeEEEeecCCCChhhHHHHH
Q 004860 417 SSFLNGATLALYQGS-P--LERSFGKFVQDAGVTVLGTVPSLVKAWRNTN-CLEGLDWTKIRSFASTGETSNVDDDLWLS 492 (727)
Q Consensus 417 ~~l~~G~~lv~~~~~-~--~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~-~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~ 492 (727)
.+++.|+++++.+.. + ++..+++.++++++|++..+|.++..+.... .....++++||.+++||+++++++.+++.
T Consensus 214 ~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 293 (525)
T PRK05851 214 TAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCDGFERFA 293 (525)
T ss_pred HHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHHHHHHHH
Confidence 999999999997631 2 5678999999999998866666555554322 12345678999999999999999888776
Q ss_pred hhC-----CCCcccccccccccccccccCCCC--------------CCccccccccCCCCceEEEECCCC-CcCCCCCCe
Q 004860 493 SKA-----WYNAIIESCGGTELSSAYIQGSLL--------------QPQAFGAFSTATMTAGLVILDECG-VPYPDDQPC 552 (727)
Q Consensus 493 ~~~-----~~~~l~n~YG~TE~~~~~~~~~~~--------------~~~~~~~iG~p~~~~~~~vld~~~-~~~p~G~~g 552 (727)
+.+ +..+++|.||+||+++.++...+. .....+++|+|++|++++|+|+++ .++|.|+.
T Consensus 294 ~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~~g~~- 372 (525)
T PRK05851 294 TAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGAAGVAGREI- 372 (525)
T ss_pred HHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCCccCCCCCe-
Confidence 532 224599999999998655432211 012346899999999999999776 46899985
Q ss_pred eeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHH
Q 004860 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (727)
Q Consensus 553 iGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (727)
|||++ +.||++.+. . ...+||+|||+|+++ +|+|+|+||+||+||++|+||+|.||
T Consensus 373 -GEl~v~g~~~~~GY~~~~~------~-----------~~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eI 433 (525)
T PRK05851 373 -GEIEIRGASMMSGYLGQAP------I-----------DPDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEI 433 (525)
T ss_pred -EEEEEecCchhhccccCCc------c-----------CCCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHH
Confidence 99998 345555321 1 112399999999986 89999999999999999999999999
Q ss_pred HHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcC--CCCCCCC
Q 004860 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP--EFPRTAS 705 (727)
Q Consensus 628 E~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~--~lP~t~~ 705 (727)
|++|. +||+|.+|+|++.+++..+ +.+.++|+... ...+.++++++++++|...+ +++|..+++++ +||+|+|
T Consensus 434 E~~l~-~~p~V~~~~vv~~~~~~~~-~~~~~~v~~~~-~~~~~~~~~~~~~~~l~~~l--~~~P~~~~~v~~~~lP~t~~ 508 (525)
T PRK05851 434 ERVAA-QVRGVREGAVVAVGTGEGS-ARPGLVIAAEF-RGPDEAGARSEVVQRVASEC--GVVPSDVVFVAPGSLPRTSS 508 (525)
T ss_pred HHHHH-hCCCcccceEEEEEecCCC-CceeEEEEEEe-cCcchHHHHHHHHHHHHHHh--CCCccEEEEECCCCcCcCcc
Confidence 99995 8999999999999887777 67777766542 12344667777777776655 38999999998 8999999
Q ss_pred chhhHHHHHHHHhh
Q 004860 706 NKLLRRVLRDQIKH 719 (727)
Q Consensus 706 GKvdR~~L~~~~~~ 719 (727)
|||+|++|++.+++
T Consensus 509 GKi~r~~L~~~~~~ 522 (525)
T PRK05851 509 GKLRRLAVKRSLEA 522 (525)
T ss_pred hHHHHHHHHHHHHh
Confidence 99999999998764
No 45
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.7e-64 Score=570.16 Aligned_cols=491 Identities=22% Similarity=0.249 Sum_probs=400.2
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+++|+++|+.+.++ .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|+++
T Consensus 11 ~~~p~~~a~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 82 (515)
T TIGR03098 11 ARLPDATALVHHDR--------TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPINP 82 (515)
T ss_pred HHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeCCC
Confidence 67999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
.++.+++..+++.++++++++++... +.........+. ..+.+...... .........|+++......
T Consensus 83 ~~~~~~~~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-- 152 (515)
T TIGR03098 83 LLKAEQVAHILADCNVRLLVTSSERL------DLLHPALPGCHDLRTLILVGEPAHA--SEGGGESPSWPKLLALGDA-- 152 (515)
T ss_pred CCCHHHHHHHHHcCCCeEEEEccchh------hhhHhhhhcccccceEEEecCcccc--cCCccccccHHHhhccccc--
Confidence 99999999999999999999986432 111111112111 22233221111 1112233456665443221
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCc
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGA 423 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~ 423 (727)
........+++++++|||||||.||||++||+++...+......+++.++|++++..|++|++++..++.++..|+
T Consensus 153 ----~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~ 228 (515)
T TIGR03098 153 ----DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVGA 228 (515)
T ss_pred ----cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcCC
Confidence 1222335688999999999999999999999999988887777788999999999999999999988899999999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccc
Q 004860 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (727)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (727)
++++.+ ..++..+++.++++++|++.++|+++..|.+... ...+++++|.+++||+++++.+.+.+.+.++++.+++.
T Consensus 229 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 306 (515)
T TIGR03098 229 TVVLHD-YLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW-PESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLM 306 (515)
T ss_pred EEEEcC-CCCHHHHHHHHHHcCCceEecChHHHHHHHhccc-CCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeee
Confidence 999886 4678899999999999999999999999987532 22457899999999999999999999888877889999
Q ss_pred ccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccccccc
Q 004860 504 CGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (727)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~ 578 (727)
||+||++..............+++|+|++++.++|+|+++++++.|+. ||+++ ..||++.+ +.+...
T Consensus 307 YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~gy~~~~------~~~~~~ 378 (515)
T TIGR03098 307 YGLTEAFRSTYLPPEEVDRRPDSIGKAIPNAEVLVLREDGSECAPGEE--GELVHRGALVAMGYWNDP------EKTAER 378 (515)
T ss_pred eccccccceEecccccccCCCCCcceecCCCEEEEECCCCCCCCCCCc--eEEEEcCchhhccccCCc------hhhhhh
Confidence 999998754333222223456789999999999999999999999985 99998 46666643 344555
Q ss_pred cccccc-----CCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCc
Q 004860 579 FRGMPM-----YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGP 653 (727)
Q Consensus 579 f~~~p~-----~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~ 653 (727)
|...+. ..+.+||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .||.|.+++|++.+++..+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g- 456 (515)
T TIGR03098 379 FRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAY-ATGLVAEAVAFGVPDPTLG- 456 (515)
T ss_pred hhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHh-cCCCeeEEEEEeccCcccC-
Confidence 554332 123458999999999999999999999999999999999999999996 9999999999999998888
Q ss_pred eEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHH
Q 004860 654 EVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 715 (727)
Q Consensus 654 ~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 715 (727)
+.++++++...+...+.+++.+ .++++|+++++|..++++++||+|++||++|++|++
T Consensus 457 ~~~~~~~~~~~~~~~~~~~l~~----~l~~~l~~~~~p~~i~~v~~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 457 QAIVLVVTPPGGEELDRAALLA----ECRARLPNYMVPALIHVRQALPRNANGKIDRKALAA 514 (515)
T ss_pred ceEEEEEEeCCCCCCCHHHHHH----HHHhhCccccCCCEEEEeccCCCCCCCCCcHHHhcc
Confidence 8999999876655555555544 577789999999999999999999999999999974
No 46
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-64 Score=578.21 Aligned_cols=499 Identities=21% Similarity=0.248 Sum_probs=395.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 42 ~~~~p~~~a~~~~~~--------~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~l~ 113 (573)
T PRK05605 42 VARFGDRPALDFFGA--------TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVVEHN 113 (573)
T ss_pred HHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 368999999999766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc-EEEEcCCCCCC--------------------CC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDV--------------------GI 323 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~--------------------~~ 323 (727)
|.++.+++.+++++++++++|+++.... ....+.+..... ++.+....... ..
T Consensus 114 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (573)
T PRK05605 114 PLYTAHELEHPFEDHGARVAIVWDKVAP------TVERLRRTTPLETIVSVNMIAAMPLLQRLALRLPIPALRKARAALT 187 (573)
T ss_pred cCCCHHHHHHHHhccCCcEEEechhhHH------HHHhhhhccccceeEeeecccccccccccccccccccccccccccc
Confidence 9999999999999999999999775321 111111111111 11111000000 00
Q ss_pred CCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC-C-CCCCEEE
Q 004860 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-L-KVGDVYC 401 (727)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-~-~~~d~~l 401 (727)
....+..+|.++......... .........++++++++|||||||.||+|+++|+++...+......+. + ..+++++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 188 GPAPGTVPWETLVDAAIGGDG-SDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVL 266 (573)
T ss_pred cCCCcceeHHHHhhccccccc-cccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEE
Confidence 001233456665543221000 001122346789999999999999999999999998877654433222 2 3478999
Q ss_pred Eecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeec
Q 004860 402 WPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (727)
Q Consensus 402 ~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gG 480 (727)
+..|+.|..++ ..++.++..|+++++.+ ..++..+++.|+++++|++.++|++++.|.+.......++++||.+++||
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg 345 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLP-APDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGA 345 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECC
Confidence 99999988876 44667899999999876 45788999999999999999999999999987665666789999999999
Q ss_pred CCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCC--CCcCCCCCCeeeeEEE
Q 004860 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC--GVPYPDDQPCVGEVGL 558 (727)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~--~~~~p~G~~giGel~v 558 (727)
++++++..+++.+.+ ++++++.||+||+++++...........+++|+|++++.++|+|++ ++++|.|.. |||++
T Consensus 346 ~~l~~~~~~~~~~~~-~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~~g~~--Gel~v 422 (573)
T PRK05605 346 MALPVSTVELWEKLT-GGLLVEGYGLTETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVDPEDPDETMPDGEE--GELLV 422 (573)
T ss_pred CcCCHHHHHHHHHHh-CCCeecccccchhchhhhcCCcccCCcCCccccCCCCCEEEEEcCCCCCccCCCCCe--eEEEE
Confidence 999999988887655 5789999999999876554443333445789999999999999976 588999985 99998
Q ss_pred e-----cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 559 F-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 559 ~-----~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
. .||++ +++.++..|. .| ||+|||+|+++++|+++++||.||+||++|++|+|.|||+++.
T Consensus 423 ~~~~~~~gy~~------~~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~- 488 (573)
T PRK05605 423 RGPQVFKGYWN------RPEETAKSFL-----DG--WFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLR- 488 (573)
T ss_pred ecCchhhhhcC------ChhHhhhccc-----CC--CcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHH-
Confidence 3 34444 3334554553 23 9999999999999999999999999999999999999999996
Q ss_pred cCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHH
Q 004860 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVL 713 (727)
Q Consensus 634 ~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L 713 (727)
.||.|.+++|++.++...+ +.+++++++.++...+.++ +++.+++.|++|++|..|+++++||+|++||++|++|
T Consensus 489 ~~~~i~~~~v~~~~~~~~~-~~~~~~vv~~~~~~~~~~~----l~~~~~~~l~~~~~p~~i~~~~~iP~t~~GKi~r~~L 563 (573)
T PRK05605 489 EHPGVEDAAVVGLPREDGS-EEVVAAVVLEPGAALDPEG----LRAYCREHLTRYKVPRRFYHVDELPRDQLGKVRRREV 563 (573)
T ss_pred hCcccceEEEEeeecccCC-eEEEEEEEECCCCCCCHHH----HHHHHHHhCccccCCcEEEEeccCCCCCcccccHHHH
Confidence 9999999999999888777 8999999998775555544 4455778899999999999999999999999999999
Q ss_pred HHHHhhhhc
Q 004860 714 RDQIKHELS 722 (727)
Q Consensus 714 ~~~~~~~~~ 722 (727)
++++.+++.
T Consensus 564 ~~~~~~~~~ 572 (573)
T PRK05605 564 REELLEKLG 572 (573)
T ss_pred HHHHHHHhc
Confidence 999977654
No 47
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.3e-65 Score=586.42 Aligned_cols=490 Identities=19% Similarity=0.195 Sum_probs=376.2
Q ss_pred CCCCCceEEEEecCC-CCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec-C
Q 004860 187 RKEDNTVAIVWREDR-CDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-A 264 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~-~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl-~ 264 (727)
+.+||++|+++.+.. ...+..+.+||+||+++++++|++|.+.+++||+|+|+++|++++++++|||+++|++++|+ +
T Consensus 32 ~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~ 111 (631)
T PRK07769 32 KVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDYLIAFFGALYAGRIAVPLFD 111 (631)
T ss_pred HhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCC
Confidence 578999999985421 01123458999999999999999998669999999999999999999999999999999999 5
Q ss_pred CCCC--HHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC----CcEEEEcCCCCCCCCCCCcCcccHHHHhcc
Q 004860 265 DSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (727)
Q Consensus 265 p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (727)
+..+ .+++.+++++++++++|+++.... .........+ ..++.+... .+..
T Consensus 112 ~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~-- 168 (631)
T PRK07769 112 PAEPGHVGRLHAVLDDCTPSAILTTTDSAE------GVRKFFRARPAKERPRVIAVDAV---------------PDEV-- 168 (631)
T ss_pred CCccchHHHHHHHHHhCCCCEEEEChHHHH------HHHHHHhhccccccceEEEcccc---------------cccc--
Confidence 6665 688999999999999999875321 1111111111 111111100 0000
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHh
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (727)
.. ........++++++|+|||||||.||||+++|+++...+......+++.++|++++.+|++|++++..++.+
T Consensus 169 -~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~~~~~ 242 (631)
T PRK07769 169 -GA-----TWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLITVLLP 242 (631)
T ss_pred -cc-----ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHHHHHH
Confidence 00 001113457899999999999999999999999998888777777889999999999999999999878888
Q ss_pred hhcCcEEEEecC-CC--ChhhHHHHHHHhCC---CEEEechHHHHHHHhc---CC--CCCCCccceeEEEeecCCCChhh
Q 004860 419 FLNGATLALYQG-SP--LERSFGKFVQDAGV---TVLGTVPSLVKAWRNT---NC--LEGLDWTKIRSFASTGETSNVDD 487 (727)
Q Consensus 419 l~~G~~lv~~~~-~~--~~~~l~~~i~~~~v---t~l~~~P~~l~~l~~~---~~--~~~~~l~~Lr~i~~gGe~l~~~~ 487 (727)
++.|+++++.++ .. ++..+++.+.++++ +++..+|+++..+... .. ....++++||.+++||++++++.
T Consensus 243 ~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~l~~~~ 322 (631)
T PRK07769 243 ALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEPVSPAS 322 (631)
T ss_pred HhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCCCCHHH
Confidence 889999998854 22 77889999999886 7899999988776542 11 12457899999999999999999
Q ss_pred HHHHHhhCC-----CCcccccccccccccccccCCCCCC--------------------------ccccccccCCCCceE
Q 004860 488 DLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAGL 536 (727)
Q Consensus 488 ~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~~~~~ 536 (727)
.+++.+.++ ...++|.||+||++..++....... ....++|+|+++..+
T Consensus 323 ~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~ 402 (631)
T PRK07769 323 MRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWA 402 (631)
T ss_pred HHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEE
Confidence 888887652 2469999999998765443221110 012478999999999
Q ss_pred EEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccccccccccccc-----------CCCceeeeeCceEEE
Q 004860 537 VILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM-----------YKGMCLRRHGDIIKR 599 (727)
Q Consensus 537 ~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~-----------~~g~~~yrTGDl~~~ 599 (727)
+|+| ++++++|.|+. |||++ +.||++ +++.+++.|...+. ..+.+||||||+|++
T Consensus 403 ~ivd~~~g~~~~~ge~--GEl~v~gp~v~~GY~~------~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~ 474 (631)
T PRK07769 403 VIVDPETASELPDGQI--GEIWLHGNNIGTGYWG------KPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVY 474 (631)
T ss_pred EEEcCCCCcCCCCCCE--EEEEecCCCccccccC------ChhHHHHHHhhhcccccccccccCcccCCCeeeccccccE
Confidence 9999 57999999985 99998 355665 34466666753210 123469999999999
Q ss_pred ecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCcee--eEEEeecC-------------------CCCCceEEEE
Q 004860 600 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVSP-------------------AGGGPEVLVI 658 (727)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~--a~vv~~~~-------------------~~~~~~~l~a 658 (727)
+ ||+|+|+||+||+||++|+||+|.|||++|.+.||.|.+ ++|+++++ +..+ +.+++
T Consensus 475 ~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~g-e~~~a 552 (631)
T PRK07769 475 F-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTS-EQLVI 552 (631)
T ss_pred E-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccccccccccccccccccccCCCC-ccEEE
Confidence 5 999999999999999999999999999999634899998 88999888 4466 89999
Q ss_pred EEEecCCC-CCChHHHHHHHHHHHHhhcCC-Cc-ccceEEEcC--CCCCCCCchhhHHHHHHHHhh
Q 004860 659 FVVLKKGF-TSQPDKLKMIFSKAIQSKLNP-LF-KVSLVKVVP--EFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 659 ~vv~~~~~-~~~~~~l~~~l~~~l~~~L~~-~~-~P~~i~~v~--~lP~t~~GKvdR~~L~~~~~~ 719 (727)
+|+++++. ..+.+++.++++++ |+. |+ .|..+++++ +||+|++|||+|++|++.+.+
T Consensus 553 ~v~~~~~~~~~~~~~l~~~~~~~----l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~ 614 (631)
T PRK07769 553 VAERAPGAHKLDPQPIADDIRAA----IAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLD 614 (631)
T ss_pred EEEecCccccccHHHHHHHHHHH----HHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHc
Confidence 99988763 45666677665554 443 45 377888886 799999999999999998754
No 48
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.7e-64 Score=575.56 Aligned_cols=507 Identities=20% Similarity=0.219 Sum_probs=403.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+.+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 26 ~~~~~~~~ai~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 99 (559)
T PRK08315 26 AARYPDREALVYRDQG------LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATAKIGAILVTIN 99 (559)
T ss_pred HHHCCCCeEEEEcCCC------eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCeEEEecC
Confidence 4689999999985431 3799999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhC-------------CCcEEEEcCCCCCCCCCCCcCccc
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------------PLKAIVLPAIGNDVGIPLREQDLS 331 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~~~~~~~~ 331 (727)
|.++.+++..++++++++++++++..... ............. +....++..... ...+...
T Consensus 100 ~~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 173 (559)
T PRK08315 100 PAYRLSELEYALNQSGCKALIAADGFKDS-DYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDE-----KHPGMLN 173 (559)
T ss_pred ccCCHHHHHHHHHhcCCCEEEEecccccc-chHHHHHHhhhhhhcccccccccccCCCceeEEeeccc-----CCccccc
Confidence 99999999999999999999998753211 0000011110100 100011110100 0112345
Q ss_pred HHHHhcccCCCC-CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEeccccccc
Q 004860 332 WKDFLSSVDYHP-RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVM 410 (727)
Q Consensus 332 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~ 410 (727)
|.++........ ...........+++++|++|||||||.||||.++|++++..+......++++++|+++...|+.|..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~ 253 (559)
T PRK08315 174 FDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKLTEEDRLCIPVPLYHCF 253 (559)
T ss_pred HHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCCCCCceEEEecCcHHHH
Confidence 555543321100 0001112234568899999999999999999999999998888877888999999999999999888
Q ss_pred ch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHH
Q 004860 411 GP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDL 489 (727)
Q Consensus 411 ~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~ 489 (727)
+. +.++.++..|+++++.....++..+++.++++++|++.++|+++..++........++++||.+++||++++++..+
T Consensus 254 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~lr~~~~~G~~~~~~~~~ 333 (559)
T PRK08315 254 GMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSSLRTGIMAGSPCPIEVMK 333 (559)
T ss_pred HHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchhhheeEecCCCCCHHHHH
Confidence 87 55788999999999776667888999999999999999999999998877655556789999999999999999988
Q ss_pred HHHhhCCCCcccccccccccccccccCCCCC--CccccccccCCCCceEEEECCC-CCcCCCCCCeeeeEEE-----ecc
Q 004860 490 WLSSKAWYNAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGL-----FPL 561 (727)
Q Consensus 490 ~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~~~~~~~vld~~-~~~~p~G~~giGel~v-----~~~ 561 (727)
.+.+.++..+++|.||+||++.+++...... .....++|+|++++.++|+|++ ++++|.|+. |||+| ..|
T Consensus 334 ~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--GEl~v~g~~~~~g 411 (559)
T PRK08315 334 RVIDKMHMSEVTIAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVDPETGETVPRGEQ--GELCTRGYSVMKG 411 (559)
T ss_pred HHHHHcCCcceeEEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEcCccCCcCCCCCc--eEEEEECchhhhh
Confidence 8888876667999999999986544333222 2345789999999999999988 999999996 99998 356
Q ss_pred cCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceee
Q 004860 562 YLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILET 641 (727)
Q Consensus 562 y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a 641 (727)
|++.+ +.++..|.. ..||+|||+|++++||+++|+||.||+||++|++|+|.|||++|. .+|+|.++
T Consensus 412 y~~~~------~~~~~~~~~------~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~ 478 (559)
T PRK08315 412 YWNDP------EKTAEAIDA------DGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREIEEFLY-THPKIQDV 478 (559)
T ss_pred hcCCh------hHHhhcCCC------CCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHHHHHHH-hCCCceEE
Confidence 66533 344444422 239999999999999999999999999999999999999999996 89999999
Q ss_pred EEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhh
Q 004860 642 AAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 721 (727)
Q Consensus 642 ~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 721 (727)
+|++.+++..+ +.++++|++..+...+.+++++ .+++.||.|++|..++++++||+|+|||++|++|++++....
T Consensus 479 ~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~----~l~~~l~~~~~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~~~ 553 (559)
T PRK08315 479 QVVGVPDEKYG-EEVCAWIILRPGATLTEEDVRD----FCRGKIAHYKIPRYIRFVDEFPMTVTGKIQKFKMREMMIEEL 553 (559)
T ss_pred EEEecCCCCCC-eEEEEEEEeCCCCCCCHHHHHH----HHHhhcccccCCcEEEEcccCCCCCCCceeHHHHHHHHHhhh
Confidence 99999888766 8899999987765555555544 577889999999999999999999999999999999987766
Q ss_pred ccc
Q 004860 722 SVR 724 (727)
Q Consensus 722 ~~~ 724 (727)
..+
T Consensus 554 ~~~ 556 (559)
T PRK08315 554 GLQ 556 (559)
T ss_pred chh
Confidence 544
No 49
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-64 Score=570.71 Aligned_cols=494 Identities=20% Similarity=0.231 Sum_probs=389.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
..+|+++++.+... +..+.+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 21 ~~~~~~~~~~~~~~----~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 96 (539)
T PRK07008 21 RHAGDTEIVSRRVE----GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGVSGSGAVCHTINP 96 (539)
T ss_pred hhCCCceEEEeecc----CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 67788888775321 1235899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc-E-EEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-A-IVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
.++.+++.++++++++++++++..+. +....+....... . +.+..... .... .....+|+++......
T Consensus 97 ~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~~~~~-- 166 (539)
T PRK07008 97 RLFPEQIAYIVNHAEDRYVLFDLTFL------PLVDALAPQCPNVKGWVAMTDAAH-LPAG-STPLLCYETLVGAQDG-- 166 (539)
T ss_pred ccCHHHHHHHHhccCCcEEEEcchhH------HHHHHHHhhCCCceEEEEEccCCc-cccC-CcccccHHHHhcccCC--
Confidence 99999999999999999999987542 1122222222221 1 22221111 0000 1124556666543221
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHH--HhhchhcCCCCCCEEEEecccccccchHHhHHhhhc
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT--AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~--~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (727)
........++++++++|||||||.||||++||++++... ......+++.++|++++..|++|..+...++.++..
T Consensus 167 ---~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~ 243 (539)
T PRK07008 167 ---DYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLT 243 (539)
T ss_pred ---CcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhc
Confidence 111223467889999999999999999999999986433 233346788899999999999887776556788999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
|+++++.+...++..+++.++++++|++.++|+++..|++.......++++||.+++||+++++.+..++.+.+ +++++
T Consensus 244 G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~-~~~l~ 322 (539)
T PRK07008 244 GAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRTFEDEY-GVEVI 322 (539)
T ss_pred CceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHHHh-CCcee
Confidence 99999987667888999999999999999999999999887655556788999999999999999998887766 68999
Q ss_pred ccccccccccccccCCCC------CC----ccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCC
Q 004860 502 ESCGGTELSSAYIQGSLL------QP----QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGAS 566 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~------~~----~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~ 566 (727)
+.||+||++...+..... .+ ....++|+|++++.++|+|++++++|.+...+|||++. .||++.+
T Consensus 323 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~ 402 (539)
T PRK07008 323 HAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGRELPWDGKAFGDLQVRGPWVIDRYFRGD 402 (539)
T ss_pred cccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCCccCCCCCcceEEEEeCCccchhhcCCh
Confidence 999999998644332211 00 11357899999999999999999998653225999984 4555432
Q ss_pred ccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEee
Q 004860 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISV 646 (727)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~ 646 (727)
. .|+..| ||+|||+|++++||+++++||+||+||++|++|+|.|||++|. .||.|.+++|++.
T Consensus 403 ~--------------~~~~~g--~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~v~~~~v~~~ 465 (539)
T PRK07008 403 A--------------SPLVDG--WFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAV-AHPAVAEAACIAC 465 (539)
T ss_pred h--------------hhhcCC--CcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHH-hCCceeEEEEEec
Confidence 1 122223 9999999999999999999999999999999999999999995 9999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 647 SPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 647 ~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
++...+ +.++++|+..++...+.+++++ +++++|++|++|..|+++++||+|+|||++|++|++++.+-
T Consensus 466 ~~~~~~-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~P~~i~~v~~lP~t~sgKi~r~~l~~~~~~~ 534 (539)
T PRK07008 466 AHPKWD-ERPLLVVVKRPGAEVTREELLA----FYEGKVAKWWIPDDVVFVDAIPHTATGKLQKLKLREQFRDY 534 (539)
T ss_pred CCchhc-cceEEEEEeCCCCccCHHHHHH----HHHhhcccccCCeEEEEecCCCCCCccceeHHHHHHHHHhh
Confidence 988777 7889998887765555555544 56778899999999999999999999999999999988653
No 50
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.1e-64 Score=573.48 Aligned_cols=505 Identities=19% Similarity=0.217 Sum_probs=401.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+++|+++|+++.+.+ ..+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 29 ~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G~~~v~l~~ 102 (558)
T PRK12583 29 ARFPDREALVVRHQA------LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIGAILVNINP 102 (558)
T ss_pred HHCCCCeEEEecCCC------cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhCCEEEecCC
Confidence 689999999885431 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh-------------CCCcEEEEcCCCCCCCCCCCcCcccH
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-------------APLKAIVLPAIGNDVGIPLREQDLSW 332 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~~~~~~~~~ 332 (727)
.++.+++.+++++++++++|+++..... +........... .+....++..... .......|
T Consensus 103 ~~~~~~~~~~l~~~~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 176 (558)
T PRK12583 103 AYRASELEYALGQSGVRWVICADAFKTS-DYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPA-----PPPGFLAW 176 (558)
T ss_pred CCCHHHHHHHHHhcCCcEEEEecccccc-chhHHHHHHhhhhccccccccccccCCcceEEEEecCC-----CCccccch
Confidence 9999999999999999999998753211 111111111111 1111111111110 01122345
Q ss_pred HHHhcccCCCCC-CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccc
Q 004860 333 KDFLSSVDYHPR-PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMG 411 (727)
Q Consensus 333 ~~~~~~~~~~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~ 411 (727)
++.......... ..........++++++++|||||||.||||.++|+++.+.+......+++.++|++++..|+.|..+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g 256 (558)
T PRK12583 177 HELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTEHDRLCVPVPLYHCFG 256 (558)
T ss_pred HhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCCCCeEEEecCchhhhh
Confidence 544332211000 0011112345788999999999999999999999999988887777889999999999999999988
Q ss_pred h-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHH
Q 004860 412 P-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLW 490 (727)
Q Consensus 412 ~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~ 490 (727)
. +.++.++..|+++++.....++..+++.|+++++|++.++|+++..++........++++||.+++||++++++..++
T Consensus 257 ~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~ 336 (558)
T PRK12583 257 MVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRTGIMAGAPCPIEVMRR 336 (558)
T ss_pred HHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheEEEecCCCCCHHHHHH
Confidence 7 557888999999988766678889999999999999999999998888765545567899999999999999999999
Q ss_pred HHhhCCCCcccccccccccccccccCCCC--CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccC
Q 004860 491 LSSKAWYNAIIESCGGTELSSAYIQGSLL--QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYL 563 (727)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~--~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~ 563 (727)
+.+.++...+++.||+||++.+.+..... ......++|+|++++.++|+|+++++++.|+. |||++ ..||+
T Consensus 337 ~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy~ 414 (558)
T PRK12583 337 VMDEMHMAEVQIAYGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVDPDGATVPRGEI--GELCTRGYSVMKGYW 414 (558)
T ss_pred HHHHcCCcceeccccccccccceeccCcccccccccCCCCccCCCCeEEEECCCCCCCCCCCe--eEEEEEeCccchhhc
Confidence 88888777899999999999765443321 12345789999999999999999999999985 99988 34555
Q ss_pred CCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEE
Q 004860 564 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (727)
Q Consensus 564 ~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~v 643 (727)
+. +..+...|. ...||+|||+|++++||++++.||.||+||++|.+|+|.|||++|. .+|+|.+++|
T Consensus 415 ~~------~~~~~~~~~------~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v 481 (558)
T PRK12583 415 NN------PEATAESID------EDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEFLF-THPAVADVQV 481 (558)
T ss_pred CC------hHHHHhhcC------CCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHHHH-hCCCeeEEEE
Confidence 43 223333342 1239999999999999999999999999999999999999999996 8999999999
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhcc
Q 004860 644 ISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 644 v~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
++.++...+ +.++++++..++...+..++ ++.++++|++|++|..++++++||+|++||++|+.|+++..++++.
T Consensus 482 ~~~~~~~~~-~~~~~~v~~~~~~~~~~~~i----~~~~~~~L~~~~~P~~i~~v~~lP~t~sGK~~r~~L~~~~~~~~~~ 556 (558)
T PRK12583 482 FGVPDEKYG-EEIVAWVRLHPGHAASEEEL----REFCKARIAHFKVPRYFRFVDEFPMTVTGKVQKFRMREISIEELAL 556 (558)
T ss_pred EeeecCCCC-cEEEEEEEECCCCCCCHHHH----HHHHHhhcccCcCCcEEEEeccCCCCCCCCccHHHHHHHHHhhcCC
Confidence 999988777 89999999887655554444 4457788999999999999999999999999999999998877654
No 51
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-64 Score=571.28 Aligned_cols=508 Identities=20% Similarity=0.220 Sum_probs=390.0
Q ss_pred CcCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004860 166 TWLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (727)
Q Consensus 166 ~w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~ 244 (727)
.|......+.....+.+. ++++||++|+++.+. .+.+||+||.++++++|++|.+. +++||+|+|+++|++
T Consensus 8 ~~~~~~~~~~l~~~l~~~--a~~~p~~~ai~~~~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~ 79 (534)
T PRK05852 8 APMASDFGPRIADLVEVA--ATRLPEAPALVVTAD------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNA 79 (534)
T ss_pred cchhhhhcccHHHHHHHH--HHhCCCCcEEEecCC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcH
Confidence 443333333333444433 368999999987543 13799999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCC
Q 004860 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIP 324 (727)
Q Consensus 245 ~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (727)
++++++|||+++|++++|++|.++.+++.+++++++++++|+++....... ....... ...+.+......
T Consensus 80 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~---- 149 (534)
T PRK05852 80 EFVVALLAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRA-----EPTTRWW-PLTVNVGGDSGP---- 149 (534)
T ss_pred HHHHHHHHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhc-----ccccccc-ceeeeecccccc----
Confidence 999999999999999999999999999999999999999998764211000 0000000 111111111000
Q ss_pred CCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEec
Q 004860 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPT 404 (727)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~ 404 (727)
....... ........ .. ........++++++++|||||||.||||+++|+++.+.+......+++.++|++++..
T Consensus 150 -~~~~~~~-~~~~~~~~--~~-~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 224 (534)
T PRK05852 150 -SGGTLSV-HLDAATEP--TP-ATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVM 224 (534)
T ss_pred -ccccccc-ccccccCC--Cc-cccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEec
Confidence 0000000 00000000 00 0011112246789999999999999999999999998888887888999999999999
Q ss_pred ccccccchH-HhHHhhhcCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCC--CCCccceeEEEeec
Q 004860 405 NLGWVMGPV-ILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--GLDWTKIRSFASTG 480 (727)
Q Consensus 405 ~~~~~~~~~-~~~~~l~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~~Lr~i~~gG 480 (727)
|+.|..++. .++.++..|+++++.+. ..++..+++.|+++++|++.++|+++..|.+..... ..+++++|.++++|
T Consensus 225 p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G 304 (534)
T PRK05852 225 PLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCS 304 (534)
T ss_pred CcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECC
Confidence 999998884 47888999999888653 456789999999999999999999999998754321 23568999999999
Q ss_pred CCCChhhHHHHHhhCCCCcccccccccccccccccCCCC------C-CccccccccCCCCceEEEECCCCCcCCCCCCee
Q 004860 481 ETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLL------Q-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCV 553 (727)
Q Consensus 481 e~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~------~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~gi 553 (727)
+++++...+++.+.+ ++++++.||+||++..++..... . ....+..|+ .++++++|+|++|+++|.|+.
T Consensus 305 ~~~~~~~~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~g~-~~g~~~~i~d~~g~~~~~g~~-- 380 (534)
T PRK05852 305 APLTAETAQALQTEF-AAPVVCAFGMTEATHQVTTTQIEGIGQTENPVVSTGLVGR-STGAQIRIVGSDGLPLPAGAV-- 380 (534)
T ss_pred CCCCHHHHHHHHHHh-CCChhhccCccccchhhhcCCccccccccCcccccccCCC-CCCCeEEEECCCCCCCCCCCc--
Confidence 999999988888776 57899999999998755433221 0 112233444 699999999999999999986
Q ss_pred eeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHH
Q 004860 554 GEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 628 (727)
Q Consensus 554 Gel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE 628 (727)
|||++ ..||++. ++.+++.|. .| ||+|||+|++|+||++++.||+||+||++|.+|+|.|||
T Consensus 381 Gel~v~g~~v~~gY~~~------~~~t~~~~~-----~g--~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE 447 (534)
T PRK05852 381 GEVWLRGTTVVRGYLGD------PTITAANFT-----DG--WLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVE 447 (534)
T ss_pred eEEEEecCcccchhcCC------cccchhhhc-----CC--CcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHH
Confidence 99998 3556553 334555553 12 999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchh
Q 004860 629 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 708 (727)
Q Consensus 629 ~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKv 708 (727)
++|. .||+|.+|+|++.++...+ +.++++|+..++...+.+++.+ .++++||+|++|..|+++++||+|++||+
T Consensus 448 ~~l~-~~~~V~~~~v~g~~~~~~g-~~~~~~vv~~~~~~~~~~~i~~----~~~~~l~~~~~P~~i~~v~~iP~t~~GKi 521 (534)
T PRK05852 448 GVLA-SHPNVMEAAVFGVPDQLYG-EAVAAVIVPRESAPPTAEELVQ----FCRERLAAFEIPASFQEASGLPHTAKGSL 521 (534)
T ss_pred HHHH-hCCCeeeEEEEecCCcCcC-ceEEEEEEECCCCCCCHHHHHH----HHHHhcccccCCeEEEEhhhcCCCCCccc
Confidence 9995 8999999999999988777 8999999987654455555544 56778999999999999999999999999
Q ss_pred hHHHHHHHHhh
Q 004860 709 LRRVLRDQIKH 719 (727)
Q Consensus 709 dR~~L~~~~~~ 719 (727)
+|++|++++..
T Consensus 522 ~r~~L~~~~~~ 532 (534)
T PRK05852 522 DRRAVAEQFGH 532 (534)
T ss_pred cHHHHHHHhcc
Confidence 99999998854
No 52
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-64 Score=580.60 Aligned_cols=498 Identities=17% Similarity=0.144 Sum_probs=380.3
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.++ ++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 47 a~~~p~~~Ai~~~~~--------~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~~v~l~ 118 (600)
T PRK08279 47 AARHPDRPALLFEDQ--------SISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAVVALLN 118 (600)
T ss_pred HHhCCCCcEEEeCCC--------cccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEeecC
Confidence 368999999999776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
+.++.+++.+++++++++++|+++... +....+...... ..+++...... .....|.++.......+
T Consensus 119 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 186 (600)
T PRK08279 119 TQQRGAVLAHSLNLVDAKHLIVGEELV------EAFEEARADLARPPRLWVAGGDTL------DDPEGYEDLAAAAAGAP 186 (600)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHH------HHHHHHhhhhcccceEEEecCccc------cccccHHHHhhhcccCC
Confidence 999999999999999999999987532 112222222211 12222111100 00223444332221111
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHH-hHHhhhcC
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNG 422 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G 422 (727)
...........++++++|+|||||||.||||+++|+++++.+.+....++++++|++++.+|++|.+++.. ++.++..|
T Consensus 187 ~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 266 (600)
T PRK08279 187 TTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAG 266 (600)
T ss_pred ccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHHHHHhcC
Confidence 11111223346689999999999999999999999999999988888899999999999999999999865 45567788
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
+++++.+ ..++..+++.++++++|++.++|++++.++...........++|.+ +|+.+++++.+++...++...++|
T Consensus 267 ~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~ 343 (600)
T PRK08279 267 ATLALRR-KFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRLM--IGNGLRPDIWDEFQQRFGIPRILE 343 (600)
T ss_pred cEEEEcC-CCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeEE--ecCCCCHHHHHHHHHHhCcceeee
Confidence 8887765 5678889999999999999999999999987644333345677754 477899999988888877667999
Q ss_pred cccccccccccccCCCCCCccccccccCCC----Cc---------eEEEECCCC--CcCCCCCCeeeeEEE---ecccCC
Q 004860 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATM----TA---------GLVILDECG--VPYPDDQPCVGEVGL---FPLYLG 564 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~----~~---------~~~vld~~~--~~~p~G~~giGel~v---~~~y~~ 564 (727)
.||+||++..++.. ....+++|++.+ +. ...|.+.++ .+++.|+. ||+++ +++.+.
T Consensus 344 ~YG~tE~~~~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~~~i~~~~~~~ 417 (600)
T PRK08279 344 FYAASEGNVGFINV----FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPGEV--GLLIGRITDRGPFD 417 (600)
T ss_pred eecccccceeeccc----CCCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCCCc--eeEEEEecCccccc
Confidence 99999988643321 122345666554 22 223344333 35778875 89874 222222
Q ss_pred CCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEE
Q 004860 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (727)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv 644 (727)
+|.++..++..|..+++..+.+||+|||+|++++||+++++||.||+||++|+||+|.|||++|. +||+|.+|+|+
T Consensus 418 ---GY~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l~-~~p~V~~a~v~ 493 (600)
T PRK08279 418 ---GYTDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENALS-GFPGVEEAVVY 493 (600)
T ss_pred ---ccCCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHHh-cCCCcceEEEE
Confidence 22345566666766666666779999999999999999999999999999999999999999996 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 645 SVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 645 ~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+++++..+....+++++..++...+.+++++ +++++||+|++|..|+++++||+|+|||++|++|++++.+.
T Consensus 494 gv~~~~~~~~~~~~~vv~~~~~~~~~~~l~~----~l~~~L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 565 (600)
T PRK08279 494 GVEVPGTDGRAGMAAIVLADGAEFDLAALAA----HLYERLPAYAVPLFVRLVPELETTGTFKYRKVDLRKEGFDP 565 (600)
T ss_pred EeecCCCCCccceeEEEecCCccCCHHHHHH----HHHhhCccccCCeEEEeecCCCCCcchhhhHHHHhhcCCCc
Confidence 9887654325566777766554555555554 57788999999999999999999999999999999887655
No 53
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=2.4e-64 Score=574.33 Aligned_cols=499 Identities=20% Similarity=0.234 Sum_probs=378.8
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+.+||++|+++.+. ++||+||+++++++|++|.++ +++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 25 ~~~p~~~Al~~~~~--------~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 25 ECYPNRTSIIYGKT--------RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHFAVPMAGAVLNPINT 96 (579)
T ss_pred HhCCCCeEEEECCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCcEEeeccc
Confidence 67999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhC-------CCcEEEEcCCCCCCCCCCCcCcccHHHHhcc
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-------PLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (727)
.++.+++.++|+.++++++|+++... +....+.... ...+++++...... .......+|.++...
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 168 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFE------PLAREVLHLLSSEDSNLNLPVIFIHEIDFPK--RPSSEELDYECLIQR 168 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhH------HHHHHHHhhccccccccCceEEEeccccccc--CCcccccCHHHHHhc
Confidence 99999999999999999999987543 1112221111 11233332211100 001123456666543
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHh
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (727)
................++++++|+|||||||.||||+++|+++..........+.+...+++++..|+.|..++...+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~ 248 (579)
T PLN03102 169 GEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGT 248 (579)
T ss_pred cCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCChhhhcchhHHHHH
Confidence 32211000000112356899999999999999999999999975544333344556778899999999999888777788
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCC
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (727)
+..|+++++.+. .++..+++.|+++++|++.++|+++..|.+.........++++.+++||+++++....++.. + ++
T Consensus 249 ~~~g~~~v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~-~-g~ 325 (579)
T PLN03102 249 AARGGTSVCMRH-VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQR-L-GF 325 (579)
T ss_pred HHhcCcEEeecc-CChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCCCHHHHHHHHH-c-CC
Confidence 999999988863 56778999999999999999999999998764333334567888999999999988887764 3 67
Q ss_pred cccccccccccccccccCCCC------C-------CccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----e
Q 004860 499 AIIESCGGTELSSAYIQGSLL------Q-------PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----F 559 (727)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~------~-------~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~ 559 (727)
++++.||+||+++.++..... . ....+..+.+++ .+.|.| +.++++|.+...+|||+| .
T Consensus 326 ~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~~~~~~~~v~~~~~~~GEl~v~g~~~~ 403 (579)
T PLN03102 326 QVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVKNKETQESVPRDGKTMGEIVIKGSSIM 403 (579)
T ss_pred eEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEeccccccccCCCCCCceEEEEECcchh
Confidence 899999999998643322110 0 011222233443 456667 457777753111499998 3
Q ss_pred cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCce
Q 004860 560 PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL 639 (727)
Q Consensus 560 ~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~ 639 (727)
.||++. ++.++..|.. | ||+|||+|++|+||+++|+||.||+||++|++|+|.|||++|. .||.|.
T Consensus 404 ~GY~~~------~~~t~~~f~~-----g--w~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~ 469 (579)
T PLN03102 404 KGYLKN------PKATSEAFKH-----G--WLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLY-KYPKVL 469 (579)
T ss_pred hhhcCC------hhhhHhhhcc-----C--ceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHH-hCCCcc
Confidence 566653 3355555531 3 9999999999999999999999999999999999999999996 899999
Q ss_pred eeEEEeecCCCCCceEEEEEEEecCCCCCChHH------HHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHH
Q 004860 640 ETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDK------LKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVL 713 (727)
Q Consensus 640 ~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~------l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L 713 (727)
+++|++++++..+ +.++++|++.++...+... -...+++.++++||+|++|..++++++||+|++||++|++|
T Consensus 470 ~a~vv~~~~~~~~-~~~~a~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~~~~~P~t~~gKi~r~~L 548 (579)
T PLN03102 470 ETAVVAMPHPTWG-ETPCAFVVLEKGETTKEDRVDKLVTRERDLIEYCRENLPHFMCPRKVVFLQELPKNGNGKILKPKL 548 (579)
T ss_pred eeEEEeccCcccc-ceeEEEEEecCcccccccccccccccHHHHHHHHHhhcccccCCeEEEEcccCCCCCcccccHHHH
Confidence 9999999998887 8999999988764332111 12456677888999999999999999999999999999999
Q ss_pred HHHHhhhh
Q 004860 714 RDQIKHEL 721 (727)
Q Consensus 714 ~~~~~~~~ 721 (727)
++++.+..
T Consensus 549 ~~~~~~~~ 556 (579)
T PLN03102 549 RDIAKGLV 556 (579)
T ss_pred HHHHHHhh
Confidence 99986643
No 54
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-64 Score=570.29 Aligned_cols=485 Identities=20% Similarity=0.217 Sum_probs=390.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. ++||+||.++++++|+.|.+. +++||+|+|+++|+++++++++||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 88 (528)
T PRK07470 17 ARRFPDRIALVWGDR--------SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGAVWVPTN 88 (528)
T ss_pred HHHCCCceEEEECCc--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCeEEEecC
Confidence 368999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
+.++.+++.+++++++++++++++..... ...+.+.... ..+.+.. . ....++.+++.....
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~- 152 (528)
T PRK07470 89 FRQTPDEVAYLAEASGARAMICHADFPEH------AAAVRAASPDLTHVVAIGG--A-------RAGLDYEALVARHLG- 152 (528)
T ss_pred ccCCHHHHHHHHHhcCceEEEEcchhHHH------HHHHHhhCCcCceEEEeCC--C-------cccccHHHHHhcCCC-
Confidence 99999999999999999999998754211 1111111111 1222211 1 112356665543221
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchh--cCCCCCCEEEEecccccccchHHhHHhhh
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH--IDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~--~~~~~~d~~l~~~~~~~~~~~~~~~~~l~ 420 (727)
.........++++++|+|||||||.||||+++|+++...+...... .+..++|+++..+|++|+.++..++ .++
T Consensus 153 ---~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~-~~~ 228 (528)
T PRK07470 153 ---ARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQLC-QVA 228 (528)
T ss_pred ---CCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHHH-HHh
Confidence 1112234567899999999999999999999999987654432222 2567889999999999998887554 677
Q ss_pred cCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCc
Q 004860 421 NGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNA 499 (727)
Q Consensus 421 ~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (727)
.|++.++++. ..+++.+++.|+++++|++.++|++++.+.+.......+++++|.+++||+++++....++...+ +.+
T Consensus 229 ~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~ 307 (528)
T PRK07470 229 RGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAKL-GKV 307 (528)
T ss_pred cCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHHh-CcH
Confidence 8888877753 45788899999999999999999999999887655566789999999999999999888777665 468
Q ss_pred ccccccccccccccccCCCC-------CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCc
Q 004860 500 IIESCGGTELSSAYIQGSLL-------QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASD 567 (727)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~-------~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~ 567 (727)
+++.||+||++..++..... .....+++|+|++++.++|+|+++++++.|+. |||++ ..||+++
T Consensus 308 ~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~i~~~~~~~gy~~~-- 383 (528)
T PRK07470 308 LVQYFGLGEVTGNITVLPPALHDAEDGPDARIGTCGFERTGMEVQIQDDEGRELPPGET--GEICVIGPAVFAGYYNN-- 383 (528)
T ss_pred HHHhCCCcccCCceeecchhhccccccccceeeccCcccCCcEEEEECCCCCCCCCCCc--eEEEEeCCccchhhcCC--
Confidence 99999999998655433211 12235688999999999999999999999985 99998 3455553
Q ss_pred cccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeec
Q 004860 568 RLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS 647 (727)
Q Consensus 568 ~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~ 647 (727)
++.++..|. ..||+|||+|++++||+++++||.||+||++|+||+|.|||++|. ++|+|.+++|++.+
T Consensus 384 ----~~~~~~~~~-------~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~ 451 (528)
T PRK07470 384 ----PEANAKAFR-------DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLL-THPAVSEVAVLGVP 451 (528)
T ss_pred ----HHHHHhhhc-------CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHH-hCCCceEEEEEecc
Confidence 334444443 129999999999999999999999999999999999999999995 89999999999999
Q ss_pred CCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 648 PAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 648 ~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
++..+ +.++++++..++...+.++++ +++++.|++|++|..++++++||+|+|||++|+.|+++++++
T Consensus 452 ~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~l~~~~~~~ 519 (528)
T PRK07470 452 DPVWG-EVGVAVCVARDGAPVDEAELL----AWLDGKVARYKLPKRFFFWDALPKSGYGKITKKMVREELEER 519 (528)
T ss_pred CcccC-ceeEEEEEECCCCCCCHHHHH----HHHHHhhhcCCCCcEEEEeccCCCCCcccccHHHHHHHHHhc
Confidence 88777 888999998776555555544 457788899999999999999999999999999999988654
No 55
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=3.7e-64 Score=569.50 Aligned_cols=492 Identities=20% Similarity=0.216 Sum_probs=389.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+||++|+++.+. ..+....+||+||+++++++|.+|++. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 32 ~~~~p~~~a~~~~~~--~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 109 (538)
T TIGR03208 32 VANCPDKPALTAYRD--GHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACARIGAVLNPLM 109 (538)
T ss_pred HHHCCCceEEEeecc--cCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCEEEeccC
Confidence 367899999987422 112235899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
|.++.+++.+++++++++++++++.+. ..........+....+. .++++... ....|+..+......
T Consensus 110 ~~~~~~~l~~~l~~~~~~~li~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 178 (538)
T TIGR03208 110 PIFRERELSFMLNHADSKVFVVPSVFR-GFDHAAMARELQSKLPALRQVVVIDGD----------GDDSFDRVLMTPERD 178 (538)
T ss_pred cccCHHHHHHHHHhcCCeEEEEccccc-cccHHHHHHHHhccCCcceEEEEecCC----------CCcCHHHHhhccccc
Confidence 999999999999999999999987532 11111111112222222 22222111 112344433221100
Q ss_pred CCCC---CCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHh
Q 004860 343 PRPN---YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSS 418 (727)
Q Consensus 343 ~~~~---~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~ 418 (727)
.... ........++++++++|||||||.||||+++|+++...+......++++.+|++++.+|++|..+. +.++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~ 258 (538)
T TIGR03208 179 DTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQTGFMYGLMMP 258 (538)
T ss_pred cccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHHHHHHHHHHH
Confidence 0000 011123467999999999999999999999999999888877778889999999999999998876 568899
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCC
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (727)
+..|+++++.+ ..++..+++.|+++++|++.++|+++..+.........+++++|.+++||+++++++.+++.+.+ ++
T Consensus 259 l~~g~~~~~~~-~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~~ 336 (538)
T TIGR03208 259 LILNATAVLQD-IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAPIPGILVERAWELL-GA 336 (538)
T ss_pred HHcCCEEEecC-ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCCCCHHHHHHHHHHc-CC
Confidence 99999998875 56788999999999999999999999988765433445678999999999999999988887766 58
Q ss_pred cccccccccccccccccCCCCC-CccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCcccccc
Q 004860 499 AIIESCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNA 572 (727)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~ 572 (727)
+++|.||+||++...+...... .....++|+|++++.++|+|+++++++.|+. |||++. .||+++++
T Consensus 337 ~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~g~~v~i~~~~~~~~~~g~~--Gel~v~g~~~~~gy~~~~~----- 409 (538)
T TIGR03208 337 LIVSAWGMTENGAVTVTEPDDALEKASTTDGRPLPGVEVKVIDANGAKLSQGET--GRLLVRGCSNFGGYLKRPH----- 409 (538)
T ss_pred eEEeeeccCcCCCccccCcccchhhccCcccccCCCCEEEEECCCCCCCcCCCC--cEEEEecCcccccccCCcc-----
Confidence 8999999999986544332211 1223578999999999999999999999986 999983 45554332
Q ss_pred ccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCC
Q 004860 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (727)
Q Consensus 573 ~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~ 652 (727)
.++ + .+.+||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.++...+
T Consensus 410 -~~~--~------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~~g 479 (538)
T TIGR03208 410 -LNS--T------DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLY-QHPAVAQVAIVAYPDERLG 479 (538)
T ss_pred -ccc--c------cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHh-cCcceeeEEEEeccCCCCC
Confidence 222 1 13459999999999999999999999999999999999999999995 8999999999999988777
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHHHH-hhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ-SKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~-~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
+.+++++++..+...+.+++.++ ++ .+++.|++|..++++++||+|+|||++|++|+
T Consensus 480 -~~~~a~v~~~~~~~~~~~~l~~~----~~~~~l~~~~~P~~i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 480 -ERACAVVVPKPGCTLDFAAMVAF----LKAQKVALQYIPERLEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred -ceEEEEEEECCCCCCCHHHHHHH----HHhcchhhccCCcEEEEeccCCCCCccccchHhhc
Confidence 89999999987655665665554 55 37899999999999999999999999999986
No 56
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1e-64 Score=581.58 Aligned_cols=489 Identities=22% Similarity=0.229 Sum_probs=373.7
Q ss_pred CCCCCceEEEEecCCC-CCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec-C
Q 004860 187 RKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI-A 264 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl-~ 264 (727)
+++|+++|+++.+... ..+.+..+||+||.++++++|++|.+.+++||+|+|+++|++++++++|||+++|++++|+ +
T Consensus 45 ~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 45 ANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred HhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhHHHHHHHHHHcCceeEecCC
Confidence 6789999999854210 1123458999999999999999998769999999999999999999999999999999999 6
Q ss_pred CCCC--HHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC----CcEEEEcCCCCCCCCCCCcCcccHHHHhcc
Q 004860 265 DSFA--AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP----LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (727)
Q Consensus 265 p~~~--~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (727)
+.++ .+++.+++++++++++|+++... +.......... ..++.+... ...
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~------------------~~~ 180 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAA------EAVEGFLRNLPRLRRPRVIAIDAI------------------PDS 180 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHH------HHHHHHHhhcccccCceEEEeccc------------------ccc
Confidence 8877 88999999999999999987532 11111111111 112222100 000
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC-CCCCCEEEEecccccccchHHhHH
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGPVILFS 417 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~~~~~~ 417 (727)
.. .........++++++|+|||||||+||||+++|+++++.+......++ +.+++++++.+|+.|+.++..++.
T Consensus 181 ~~-----~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl~h~~g~~~~~~ 255 (612)
T PRK12476 181 AG-----ESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPLYHDMGLSMIGF 255 (612)
T ss_pred cc-----ccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCcccccchHHHHH
Confidence 00 001112335689999999999999999999999999877766666677 788999999999999999977767
Q ss_pred hhhcCcEEEEecC-CC--ChhhHHHHHH--HhCCCEEEechHHHHHHHhcCC----CCCCCccceeEEEeecCCCChhhH
Q 004860 418 SFLNGATLALYQG-SP--LERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDDD 488 (727)
Q Consensus 418 ~l~~G~~lv~~~~-~~--~~~~l~~~i~--~~~vt~l~~~P~~l~~l~~~~~----~~~~~l~~Lr~i~~gGe~l~~~~~ 488 (727)
+++.|+++++... .. ++..+++.++ ++++|++..+|+++..++.... ....++++|| +++||++++++..
T Consensus 256 ~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~~gg~~~~~~~~ 334 (612)
T PRK12476 256 PAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LIIGSEPVSIDAV 334 (612)
T ss_pred HHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EEecccCCCHHHH
Confidence 7677777777653 22 6788999995 5899999999999887765421 1344688999 9999999999998
Q ss_pred HHHHhhCC-----CCcccccccccccccccccCCCCCC--------------------------ccccccccCCCCceEE
Q 004860 489 LWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP--------------------------QAFGAFSTATMTAGLV 537 (727)
Q Consensus 489 ~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~--------------------------~~~~~iG~p~~~~~~~ 537 (727)
+++.+.++ ..+++|.||+||++..++...+... ...+++|+|++|++++
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ 414 (612)
T PRK12476 335 TTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAV 414 (612)
T ss_pred HHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEE
Confidence 88877652 2459999999998764433221100 0124789999999999
Q ss_pred EECCC-CCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccc------------cCCCceeeeeCceEEE
Q 004860 538 ILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMP------------MYKGMCLRRHGDIIKR 599 (727)
Q Consensus 538 vld~~-~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p------------~~~g~~~yrTGDl~~~ 599 (727)
|+|++ |+++|.|+. |||++ +.||++ +++.|++.|...+ ..++.+||+|||+|++
T Consensus 415 ivd~~~g~~~~~g~~--GEl~v~g~~v~~GY~~------~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg~~ 486 (612)
T PRK12476 415 IVDPDTGAELPDGEV--GEIWLHGDNIGRGYWG------RPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLGVY 486 (612)
T ss_pred EEeCCCCcCCCCCCE--EEEEEcCCcccccccC------ChHHHHHHHhhhhccccccccccccccCCCCeeecccccee
Confidence 99988 999999995 99998 355655 3446666665211 0123469999999998
Q ss_pred ecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCcee--eEEEeecCCCCCceEEEEEEEecCCCC-CChHHHHHH
Q 004860 600 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILE--TAAISVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMI 676 (727)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~--a~vv~~~~~~~~~~~l~a~vv~~~~~~-~~~~~l~~~ 676 (727)
.||+|+|+||+||+||++|+||+|.|||++|.+.||.|.+ ++|++.+++. + ++++++++++++.. .+.+++.++
T Consensus 487 -~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~ 563 (612)
T PRK12476 487 -LDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-N-ERLVIVAERAAGTSRADPAPAIDA 563 (612)
T ss_pred -ECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-c-ceEEEEEEecCCcccccHHHHHHH
Confidence 4999999999999999999999999999999635899999 6667777766 5 89999999887643 566778887
Q ss_pred HHHHHHhhcCCCcc-cceEEEcC--CCCCCCCchhhHHHHHHHHhh
Q 004860 677 FSKAIQSKLNPLFK-VSLVKVVP--EFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 677 l~~~l~~~L~~~~~-P~~i~~v~--~lP~t~~GKvdR~~L~~~~~~ 719 (727)
+++++... |++ |..+++++ +||+|+||||+|++|++++.+
T Consensus 564 ~~~~l~~~---~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~ 606 (612)
T PRK12476 564 IRAAVSRR---HGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLD 606 (612)
T ss_pred HHHHHHHh---hCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHc
Confidence 77776543 566 57788876 699999999999999998754
No 57
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=4e-64 Score=569.99 Aligned_cols=489 Identities=19% Similarity=0.216 Sum_probs=389.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+|+++|+++...+ +.+||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 38 a~~~p~~~a~~~~~~~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~ 111 (546)
T PLN02330 38 AELYADKVAFVEAVTG------KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGGVFSGAN 111 (546)
T ss_pred hhcCCCccEEEecCCC------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEeccCC
Confidence 3689999999874221 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
|.++.+++.+++++++++++|+++...... .......+++.... ......|.+++......
T Consensus 112 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~----------~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~-- 172 (546)
T PLN02330 112 PTALESEIKKQAEAAGAKLIVTNDTNYGKV----------KGLGLPVIVLGEEK-------IEGAVNWKELLEAADRA-- 172 (546)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEccchhhhH----------hhcCCcEEEecCCC-------CCCcccHHHHHhhcccc--
Confidence 999999999999999999999988643211 11122233332111 11234566665443221
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC--CCCCCEEEEecccccccchH-HhHHhhhc
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID--LKVGDVYCWPTNLGWVMGPV-ILFSSFLN 421 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~--~~~~d~~l~~~~~~~~~~~~-~~~~~l~~ 421 (727)
..........++++++++|||||||.||||+++|+++...+.......+ ....++++...|+.|.++.. .++.+|..
T Consensus 173 ~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~ 252 (546)
T PLN02330 173 GDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITGICCATLRN 252 (546)
T ss_pred CcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHHHHHHHhhc
Confidence 1111122345689999999999999999999999998876543221111 22345788888999988874 46788999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCcc--ceeEEEeecCCCChhhHHHHHhhCCCCc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWT--KIRSFASTGETSNVDDDLWLSSKAWYNA 499 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~--~Lr~i~~gGe~l~~~~~~~~~~~~~~~~ 499 (727)
|+++++.+ ..++..+++.++++++|++.++|+++..|+........+++ ++|.+++||++++++..+++.+.+++++
T Consensus 253 g~~~~~~~-~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~~~~~~~~~ 331 (546)
T PLN02330 253 KGKVVVMS-RFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAFEAKFPGVQ 331 (546)
T ss_pred CCEEEEec-ccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHHHHHcCCCe
Confidence 99999886 56788999999999999999999999999876544444444 4789999999999999999998888899
Q ss_pred ccccccccccccccccCCCCC----CccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCccc
Q 004860 500 IIESCGGTELSSAYIQGSLLQ----PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRL 569 (727)
Q Consensus 500 l~n~YG~TE~~~~~~~~~~~~----~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~ 569 (727)
+++.||+||++++........ .....++|+|++|++++|+| ++++++|.|+. |||++ ..||++.+
T Consensus 332 ~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g~~--Gel~v~g~~~~~gy~~~~--- 406 (546)
T PLN02330 332 VQEAYGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKNTP--GELCVRSQCVMQGYYNNK--- 406 (546)
T ss_pred EEecccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCCCc--eEEEEecchhhhhhccCc---
Confidence 999999999976443321111 12345799999999999999 57899999986 99998 35566543
Q ss_pred cccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCC
Q 004860 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (727)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~ 649 (727)
+.++..|. ..+||+|||+|++++||+++++||.||+||++|++|+|.|||++|. ++|+|.+++|++++++
T Consensus 407 ---~~~~~~~~------~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~ 476 (546)
T PLN02330 407 ---EETDRTID------EDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILL-THPSVEDAAVVPLPDE 476 (546)
T ss_pred ---cchhhhcc------CCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHH-hCCchheEEEEecccc
Confidence 24444442 2349999999999999999999999999999999999999999995 8999999999999988
Q ss_pred CCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 650 ~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
..+ +.++++|++.++...+.+++ ++.+++.|++|++|+.++.+++||+|++||++|++|++++...
T Consensus 477 ~~g-~~~~a~v~~~~~~~~~~~~l----~~~~~~~l~~~~~p~~~~~v~~iP~t~~GK~~r~~L~~~~~~~ 542 (546)
T PLN02330 477 EAG-EIPAACVVINPKAKESEEDI----LNFVAANVAHYKKVRVVQFVDSIPKSLSGKIMRRLLKEKMLSI 542 (546)
T ss_pred ccC-ceeEEEEEECCCCCCCHHHH----HHHHHHhcccccCceEEEEeccCCCCCCcceeHHHHHHHHHhh
Confidence 777 89999999887655554444 4457778999999999999999999999999999999999765
No 58
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-64 Score=567.51 Aligned_cols=490 Identities=22% Similarity=0.240 Sum_probs=407.3
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+++.+|+++|+.+.++ .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++|+
T Consensus 15 ~~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~~ 86 (521)
T PRK06187 15 GARKHPDKEAVYFDGR--------RTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGAVLHPI 86 (521)
T ss_pred HHHHCCCceEEEeCCc--------eEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEec
Confidence 3478999999999887 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (727)
++.++.+++..+++.+++++++++.... +.+..+.+..+. +.+++...... ........+.+++.....
T Consensus 87 ~~~~~~~~~~~~i~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 157 (521)
T PRK06187 87 NIRLKPEEIAYILNDAEDRVVLVDSEFV------PLLAAILPQLPTVRTVIVEGDGPAA---PLAPEVGEYEELLAAASD 157 (521)
T ss_pred ccCCCHHHHHHHHHhcCCeEEEEcchHH------HHHHHHhhccCCccEEEEecCcccc---ccccccccHHHHhhcCCc
Confidence 9999999999999999999999987532 222333333332 23333222110 112234456666544322
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhc
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (727)
........++++++++|||||||.||+|.++|+++.+........++++++|++++.+|++|..++...+.++..
T Consensus 158 -----~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~ 232 (521)
T PRK06187 158 -----TFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYLALMA 232 (521)
T ss_pred -----cCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHHHHHh
Confidence 112234466899999999999999999999999999888888888999999999999999999888777779999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
|+++++++.. ++..+++.|+++++|++.++|++++.|.........+++++|.+++|||++++...+++.+.+ +++++
T Consensus 233 G~~~v~~~~~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~-~~~v~ 310 (521)
T PRK06187 233 GAKQVIPRRF-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKF-GIDLV 310 (521)
T ss_pred CCEEEecCCC-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHh-Ccchh
Confidence 9999998764 888999999999999999999999999988766567789999999999999999999888876 78999
Q ss_pred ccccccccccccccCCCCCC-----ccccccccCCCCceEEEECCCCCcCCC--CCCeeeeEEEe-----cccCCCCccc
Q 004860 502 ESCGGTELSSAYIQGSLLQP-----QAFGAFSTATMTAGLVILDECGVPYPD--DQPCVGEVGLF-----PLYLGASDRL 569 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~-----~~~~~iG~p~~~~~~~vld~~~~~~p~--G~~giGel~v~-----~~y~~~~~~~ 569 (727)
|.||+||++.+......... ....++|+|++++.++|+|++++++|. |+. |||++. .+|+++
T Consensus 311 ~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~g~~--Gel~v~~~~~~~~y~~~---- 384 (521)
T PRK06187 311 QGYGMTETSPVVSVLPPEDQLPGQWTKRRSAGRPLPGVEARIVDDDGDELPPDGGEV--GEIIVRGPWLMQGYWNR---- 384 (521)
T ss_pred eeeccCccCcccccCCcccccccccccCCccccccCCeEEEEECCCCCCCCCCCCCe--eEEEEECcchhhhhcCC----
Confidence 99999999865554433222 256789999999999999999999998 775 999983 344432
Q ss_pred cccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCC
Q 004860 570 LNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPA 649 (727)
Q Consensus 570 ~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~ 649 (727)
++.++..|. .| ||+|||+|+++++|++++.||.||+||++|.+|+|.+||++|. .+|+|.+++|++.+++
T Consensus 385 --~~~~~~~~~-----~~--~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~ 454 (521)
T PRK06187 385 --PEATAETID-----GG--WLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALY-GHPAVAEVAVIGVPDE 454 (521)
T ss_pred --HHHHHHHhh-----CC--ceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHH-hCCCceEEEEEeccCC
Confidence 223444443 23 9999999999999999999999999999999999999999995 8999999999999887
Q ss_pred CCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 650 GGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 650 ~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
..+ +.++++++++++...+..++++ ++++.|++|++|..++++++||+|++||++|+.|++++++
T Consensus 455 ~~~-~~~~~~v~~~~~~~~~~~~l~~----~l~~~l~~~~~p~~i~~v~~~P~t~~gK~~r~~l~~~~~~ 519 (521)
T PRK06187 455 KWG-ERPVAVVVLKPGATLDAKELRA----FLRGRLAKFKLPKRIAFVDELPRTSVGKILKRVLREQYAE 519 (521)
T ss_pred CcC-ceEEEEEEECCCCCCCHHHHHH----HHHHhccCCCCceEEEEccCCCCCCCCCeeHHHHHHHHhc
Confidence 777 8999999988776566555555 4677899999999999999999999999999999999875
No 59
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3e-64 Score=566.11 Aligned_cols=479 Identities=19% Similarity=0.212 Sum_probs=395.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+|+++|+.+.+. .+||+||.++++++|+.|.+. +++|++|+|+++|+.++++++|||+++|++++|++
T Consensus 10 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 81 (502)
T TIGR01734 10 AETYPQTIAYRYQGQ--------ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPVD 81 (502)
T ss_pred HHHCCCceEEEcCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCCC
Confidence 367899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
+.++.+++.++++.++++.+++++....... ....+.+. ..........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~------------~~~~~~~~---------------~~~~~~~~~~---- 130 (502)
T TIGR01734 82 TSIPSERIEMIIEAAGPELVIHTAELSIDAV------------GTQIITLS---------------ALEQAETSGG---- 130 (502)
T ss_pred CcChHHHHHHHHHhcCCCEEEeccccccccc------------CCceEEch---------------HhhhhhhhcC----
Confidence 9999999999999999999999875321100 00111110 0011111100
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcE
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (727)
+ ........++++++++|||||||.||+|+++|+++...+.+....+++..+++++...|++|+.+++.++.++..|++
T Consensus 131 ~-~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~ 209 (502)
T TIGR01734 131 P-VSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGT 209 (502)
T ss_pred C-ccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCCCE
Confidence 0 011122356889999999999999999999999999988888778889999999999999999999889999999999
Q ss_pred EEEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 425 LALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 425 lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
+++.+.. .++..+++.++++++|.+.++|+++..++........++++++.++++|++++++..+++.+.++++++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 289 (502)
T TIGR01734 210 LHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATIYN 289 (502)
T ss_pred EEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEEEe
Confidence 9998753 46788999999999999999999998877654445566889999999999999999999998888899999
Q ss_pred cccccccccccccCCC----CCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccc
Q 004860 503 SCGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNAD 573 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~ 573 (727)
.||+||++++++.... .......++|+|.++++++|+|++++++|.|+. |||++ .+||++.+ +
T Consensus 290 ~yG~tE~~~~~~~~~~~~~~~~~~~~~~vg~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~g~~~~~gy~~~~------~ 361 (502)
T TIGR01734 290 TYGPTEATVAVTSVKITQEILDQYPRLPIGFAKPDMNLFIMDEEGEPLPEGEK--GEIVIVGPSVSKGYLNNP------E 361 (502)
T ss_pred CccCCcceEEEEEEEccccccccCCccccccccCCCEEEEECCCCCCCCCCCe--eEEEEccccccccccCCc------c
Confidence 9999999864443221 122234579999999999999999999999985 99998 45666643 3
Q ss_pred cccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeec-CCCCC
Q 004860 574 HEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS-PAGGG 652 (727)
Q Consensus 574 ~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~-~~~~~ 652 (727)
.+...|.. ..|.+||+|||+|+++++ +++++||.||+||++|++|+|.|||+++. ++|.|.++++++.. +...+
T Consensus 362 ~~~~~~~~---~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~-~~~~v~~~~vv~~~~~~~~~ 436 (502)
T TIGR01734 362 KTAEAFFS---HEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLR-QSSYIESAVVVPKYNKDHKV 436 (502)
T ss_pred cchHhhee---CCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHH-cCCCccEEEEEEEEcCCCCc
Confidence 44444432 235679999999999977 99999999999999999999999999996 99999999999866 34444
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHh
Q 004860 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 718 (727)
+.++++|++......+...+.+.+++.+++.|++|++|..++++++||+|++||++|++|++++.
T Consensus 437 -~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~~~ 501 (502)
T TIGR01734 437 -EYLIAAIVPETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEEVN 501 (502)
T ss_pred -eEEEEEEEecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHhhc
Confidence 78999999876544444566677888899999999999999999999999999999999999875
No 60
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.2e-64 Score=563.35 Aligned_cols=477 Identities=21% Similarity=0.217 Sum_probs=391.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++|+++|+++.+. .+||.||.++++++|.+|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 12 ~~~~~~~~a~~~~~~--------~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 83 (497)
T PRK06145 12 ARRTPDRAALVYRDQ--------EISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLPIN 83 (497)
T ss_pred HHHCCCceEEEECCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 368899999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
+.++.+++.+++++++++++++++..... .. .....+.+.... ...+..+......
T Consensus 84 ~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~~-~~~~~~~~~~~~----------~~~~~~~~~~~~~--- 139 (497)
T PRK06145 84 YRLAADEVAYILGDAGAKLLLVDEEFDAI----------VA-LETPKIVIDAAA----------QADSRRLAQGGLE--- 139 (497)
T ss_pred cccCHHHHHHHHHhcCCcEEEEccchhhh----------hh-cccceEEecCcc----------cchhHHHhccCCC---
Confidence 99999999999999999999998753211 00 011112221100 0011111111000
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCc
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGA 423 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~ 423 (727)
........++++++++|||||||.||||+++|+++..........+++..+|+++...|+.|..++ +..+.++..|+
T Consensus 140 --~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~ 217 (497)
T PRK06145 140 --IPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGG 217 (497)
T ss_pred --CCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccC
Confidence 011123467899999999999999999999999988776666677889999999999999998877 34567899999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccc
Q 004860 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (727)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (727)
++++.+ ..++..+++.++++++|++.++|+++..++........+++++|.+++|||++++...+++.+.++++++++.
T Consensus 218 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~ 296 (497)
T PRK06145 218 TLRIHR-EFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYIDA 296 (497)
T ss_pred EEEECC-cCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceEEe
Confidence 998876 4678899999999999999999999999988765556678899999999999999999999888878899999
Q ss_pred ccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccc
Q 004860 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (727)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~ 577 (727)
||+||++..++..... .....+++|+|+++++++|+|++++++|.|+. |||++ ..||++. ++.++.
T Consensus 297 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~~~--Gel~v~g~~~~~Gy~~~------~~~~~~ 368 (497)
T PRK06145 297 YGLTETCSGDTLMEAGREIEKIGSTGRALAHVEIRIADGAGRWLPPNMK--GEICMRGPKVTKGYWKD------PEKTAE 368 (497)
T ss_pred ecCcccCCcceeccCccccccCCCcccCCCCceEEEECCCCCCCCCCCc--eEEEEECcchhhhhcCC------hHHHHH
Confidence 9999998754433221 22345689999999999999999999999985 99998 3556653 334555
Q ss_pred cccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
.|.+ .||+|||+|++++||+++++||+||+||++|++|+|.+||++|. .+|+|.+++|++.+++..+ +.++
T Consensus 369 ~~~~-------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 439 (497)
T PRK06145 369 AFYG-------DWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIY-ELPEVAEAAVIGVHDDRWG-ERIT 439 (497)
T ss_pred HHhC-------CCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEecCCCccC-ceEE
Confidence 5531 39999999999999999999999999999999999999999995 8999999999999988777 8899
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHh
Q 004860 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 718 (727)
+++++.++...+.+++. ++++++|++|++|..++++++||+|++||++|++|+++++
T Consensus 440 ~~v~~~~~~~~~~~~l~----~~~~~~l~~~~~p~~i~~v~~iP~t~~GKi~r~~l~~~~~ 496 (497)
T PRK06145 440 AVVVLNPGATLTLEALD----RHCRQRLASFKVPRQLKVRDELPRNPSGKVLKRVLRDELN 496 (497)
T ss_pred EEEEECCCCCCCHHHHH----HHHHHhhhcCCCCCEEEEeccCCCCCcccccHHHHHHHhc
Confidence 99998765555545444 4577788999999999999999999999999999998765
No 61
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=1.2e-64 Score=590.27 Aligned_cols=488 Identities=19% Similarity=0.211 Sum_probs=372.8
Q ss_pred CCCCCC-ceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDN-TVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd-~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++|+ ++|+.+.+. +++||+||.++++++|++|.+.+++||+|+|+++|++++++++|||+++|++++|++
T Consensus 214 ~~~~p~~~~a~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~~~~gd~Val~~~n~~e~~~~~lA~~~~G~v~vpl~ 286 (718)
T PRK08043 214 QYRYGAGKPCIEDVNF-------TPDSYRKLLKKTLFVGRILEKYSVEGERIGLMLPNATISAAVIFGASLRRRIPAMMN 286 (718)
T ss_pred HHHhCCCCcceEcCCC-------CcccHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCcHHHHHHHHHHHHcCCcccccc
Confidence 468897 688875321 289999999999999999987789999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHH--hcccCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDF--LSSVDY 341 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 341 (727)
+.++.+++.+++++++++++|+++......+... +....+. ..+++.... ....+.+. ......
T Consensus 287 ~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~---------~~~~~~~~~~~~~~~~ 353 (718)
T PRK08043 287 YTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWH----LPEQLTQVRWVYLEDLK---------DDVTTADKLWIFAHLL 353 (718)
T ss_pred cCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCC----hhhhhccccEEEhhhhh---------hhcchhHHHHHHHHHh
Confidence 9999999999999999999999876432111100 0011111 122211100 00011110 000000
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhh
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~ 420 (727)
.. ........++++++++|||||||.||||+++|+++++.+.+....++++++|++++.+|++|.+++ ..++.++.
T Consensus 354 --~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~ 430 (718)
T PRK08043 354 --MP-RLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLFTPLL 430 (718)
T ss_pred --CC-ccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHHHHHH
Confidence 00 001123467899999999999999999999999999888877777889999999999999999887 45789999
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
.|+++++.+...+...+++.++++++|++..+|+++..+.+.. ...++++||.+++||+++++++.+.+...+ ++++
T Consensus 431 ~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~--~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~-g~~l 507 (718)
T PRK08043 431 TGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFA--NPYDFARLRYVVAGAEKLQESTKQLWQDKF-GLRI 507 (718)
T ss_pred cCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc--CcccccceEEEEEeCccCCHHHHHHHHHHc-CCCe
Confidence 9999999875456677889999999999999999998886642 345678999999999999999988887765 6889
Q ss_pred cccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccc
Q 004860 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~ 575 (727)
++.||+||++.+++...+ .....+++|+|++|++++|+|+++. |+. |||++ ..||++.. +++.+
T Consensus 508 ~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~~~i~d~~~~----~~~--Gel~v~g~~v~~GY~~~e----~~~~~ 576 (718)
T PRK08043 508 LEGYGVTECAPVVSINVP-MAAKPGTVGRILPGMDARLLSVPGI----EQG--GRLQLKGPNIMNGYLRVE----KPGVL 576 (718)
T ss_pred ecccCcccccceEEecCC-cccCCCCCCCcCCCCeeEEecCCCC----CCc--eEEEEecCCccccccCCC----Ccccc
Confidence 999999999865543322 2335679999999999999997653 333 88887 45665521 11111
Q ss_pred ccccc-ccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCce
Q 004860 576 EVYFR-GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (727)
Q Consensus 576 ~~~f~-~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~ 654 (727)
...+. ........+||+|||+|++|+||+++|+||+||+||++|++|+|.|||+++. +|+.+.+++|++.+++..+ +
T Consensus 577 ~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~-~~~~~~~~avv~~~~~~~g-e 654 (718)
T PRK08043 577 EVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLAL-GVSPDKQHATAIKSDASKG-E 654 (718)
T ss_pred cccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHH-hCCccceEEEEEccCCCCC-c
Confidence 10000 0000112349999999999999999999999999999999999999999996 8888888889998888777 8
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhh-cCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSK-LNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~-L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
.++++++ +...+.+++++ +++++ |+.|++|..++++++||+|++|||||++|++++.+
T Consensus 655 ~~v~~~~---~~~~~~~~l~~----~~~~~~l~~~~vP~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 655 ALVLFTT---DSELTREKLQQ----YAREHGVPELAVPRDIRYLKQLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred eEEEEEc---CcccCHHHHHH----HHHhcCCCcccCCceEEEecccCcCCCCCcCHHHHHHHHhc
Confidence 8888764 23345555554 45555 99999999999999999999999999999988754
No 62
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1e-64 Score=604.47 Aligned_cols=484 Identities=16% Similarity=0.120 Sum_probs=367.5
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+++++||++|+++.++ ++||+||+++++++|+.|++. +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 456 ~a~~~pd~~Al~~~~~--------~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGav~vpl 527 (994)
T PRK07868 456 QARDAPKGEFLLFDGR--------VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGAVAVLM 527 (994)
T ss_pred HHHHCCCCeEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEEe
Confidence 4578999999998776 899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCc--CcccHHHHhcccCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLRE--QDLSWKDFLSSVDY 341 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 341 (727)
+|. +++.++++++++++||+++... ..+.+ ....++++.... ........ ...++++.......
T Consensus 528 ~p~---~~l~~il~~s~~~~li~~~~~~---------~~~~~-~~~~iiv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 593 (994)
T PRK07868 528 PPD---TDLAAAVRLGGVTEIITDPTNL---------EAARQ-LPGRVLVLGGGE-SRDLDLPDDADVIDMEKIDPDAVE 593 (994)
T ss_pred CCc---hhHHHHHhccCCeEEEEChHHH---------HHHHh-cCceEEEecCCc-cccccCCcchhhhhhhhcCccccc
Confidence 985 6899999999999999986432 11111 223344432111 00000000 01111111110000
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhc
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLN 421 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~ 421 (727)
.+.........+++++||+|| ||||.||++.++|.+...........++++++|++++.+|++|+++++..+.+++.
T Consensus 594 --~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~ 670 (994)
T PRK07868 594 --LPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVSLGGAVV 670 (994)
T ss_pred --CCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHHHHHHhc
Confidence 000011112236899999999 57888888888887755444444456788999999999999999999776666555
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
|++.++.....++..+++.|++++||++.++|++++.|++.......++++||.++. +.+++++.+++.+.++.++++
T Consensus 671 gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~g--~gl~~~l~~~~~~~~~~~~l~ 748 (994)
T PRK07868 671 GGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFIG--SGMPTGLWERVVEAFAPAHVV 748 (994)
T ss_pred cceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEec--CCCCHHHHHHHHHHhCchhee
Confidence 555555544678899999999999999999999999998865444456789998763 348999999998888778999
Q ss_pred ccccccccccccccCCCCCCccccccccCCCCc-eEEE-----------ECCCC--CcCCCCCCeeeeEEEe-cccCCCC
Q 004860 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTATMTA-GLVI-----------LDECG--VPYPDDQPCVGEVGLF-PLYLGAS 566 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~-~~~v-----------ld~~~--~~~p~G~~giGel~v~-~~y~~~~ 566 (727)
|.||+||+++... .. .....+++|+|++|+ +++| +|++| ++++.|+. |||++. ++|++ +
T Consensus 749 ~~YG~TE~~~~~~-~~--~~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~ge~--Gel~~~~~~~~~-p 822 (994)
T PRK07868 749 EFFATTDGQAVLA-NV--SGAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVNEV--GVLLARARGPID-P 822 (994)
T ss_pred eeeeccccccccc-cc--CCCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCCCc--eEEEEecCCCCC-h
Confidence 9999999875432 11 123457899999997 5554 35666 67888886 999984 44442 1
Q ss_pred ccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEee
Q 004860 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISV 646 (727)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~ 646 (727)
. ...+..+|. ++.+||+|||+|++|+||+|+|+||+||+||++|.+|+|+|||++|. +||+|.+|+|+++
T Consensus 823 ~----~t~~~~~~~-----~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~-~hp~V~~aaVvg~ 892 (994)
T PRK07868 823 T----ASVKRGVFA-----PADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALG-RIGGVDLAVTYGV 892 (994)
T ss_pred h----hhhHhcccc-----cCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHh-cCCCeeEEEEEee
Confidence 1 001222342 25679999999999999999999999999999999999999999995 9999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHh
Q 004860 647 SPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 647 ~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 718 (727)
+++. + +.+++||+++++...+.++++++ +++ ||+||+|+.|+++++||+|+|||++|++|++...
T Consensus 893 ~d~~-~-~~~~a~Vv~~~~~~~~~~~L~~~----l~~-l~~y~vP~~i~~v~~lP~T~sGKi~r~~L~~~~l 957 (994)
T PRK07868 893 EVGG-R-QLAVAAVTLRPGAAITAADLTEA----LAS-LPVGLGPDIVHVVPEIPLSATYRPTVSALRAAGI 957 (994)
T ss_pred cCCC-C-ceEEEEEEeCCCCcCCHHHHHHH----HHh-CCCCcCCeEEEEeCCCCCCccccEehHHHHhcCC
Confidence 8865 4 78999999988766776666665 544 8999999999999999999999999999987643
No 63
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=7.7e-64 Score=566.30 Aligned_cols=482 Identities=20% Similarity=0.223 Sum_probs=388.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. .+||+||.++++++|..|.+. +++|++|+++++|++++++++|||+++|++++|++
T Consensus 31 a~~~p~~~a~~~~~~--------~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G~~~vpl~ 102 (542)
T PRK06155 31 AERYPDRPLLVFGGT--------RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLGAIAVPIN 102 (542)
T ss_pred HHHCCCCeEEEeCCc--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhCCEEEEec
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhC-C-CcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA-P-LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
|.++.+++..++++++++++++++.... ......... . ...+.+..... ... ...|.........
T Consensus 103 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~- 169 (542)
T PRK06155 103 TALRGPQLEHILRNSGARLLVVEAALLA------ALEAADPGDLPLPAVWLLDAPAS---VSV---PAGWSTAPLPPLD- 169 (542)
T ss_pred cccCHHHHHHHHHhcCceEEEEChhhHH------HHHHhcccccCcceEEEecCccc---ccc---ccccchhhhcccC-
Confidence 9999999999999999999999875431 111111111 1 12222221110 000 0111111000000
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcC
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (727)
.........++++++|+|||||||.||||+++|+++.+........+++++++++++..|++|..++..++.++..|
T Consensus 170 ---~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~~~l~~G 246 (542)
T PRK06155 170 ---APAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFFQALLAG 246 (542)
T ss_pred ---CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHHHHHHcC
Confidence 01112234678999999999999999999999999988777777778999999999999999999988889999999
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
+++++.+ ..++..+++.|+++++|++.++|+++..|.+.........+++|.++.|| +++....++.+.+ +++++|
T Consensus 247 ~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~-~~~v~~ 322 (542)
T PRK06155 247 ATYVLEP-RFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERF-GVDLLD 322 (542)
T ss_pred ceEEeeC-CCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHc-CCCEEe
Confidence 9999876 45788999999999999999999999999887655556677899887666 4677777777665 678999
Q ss_pred cccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEec--------ccCCCCcccccccc
Q 004860 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFP--------LYLGASDRLLNADH 574 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~--------~y~~~~~~~~~~~~ 574 (727)
.||+||++.++.... .....+++|.|++++.++|+|++++++|.|+. |||++.. ||++ +++.
T Consensus 323 ~YG~tE~~~~~~~~~--~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gei~v~~~~~~~~~~GY~~------~~~~ 392 (542)
T PRK06155 323 GYGSTETNFVIAVTH--GSQRPGSMGRLAPGFEARVVDEHDQELPDGEP--GELLLRADEPFAFATGYFG------MPEK 392 (542)
T ss_pred eecccccCccccCCC--CCCCCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEEecCCccccchhhcC------CHHH
Confidence 999999987654322 23455789999999999999999999999985 9998832 3333 2334
Q ss_pred ccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCce
Q 004860 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (727)
Q Consensus 575 ~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~ 654 (727)
++..|. ..||+|||+|++++||+++|+||.||+||++|.+|+|.|||++|. +||+|.+++|++++++..+ +
T Consensus 393 ~~~~~~-------~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~~v~~~~~~-~ 463 (542)
T PRK06155 393 TVEAWR-------NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLL-SHPAVAAAAVFPVPSELGE-D 463 (542)
T ss_pred HHHhhc-------CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeecccccC-c
Confidence 444442 239999999999999999999999999999999999999999996 8999999999999987777 7
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHh
Q 004860 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 718 (727)
.++++++++.+...+..++++ +++++|++|++|..|+++++||+|++||++|++|++++-
T Consensus 464 ~~~~~v~~~~~~~~~~~~~~~----~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~l~~~~~ 523 (542)
T PRK06155 464 EVMAAVVLRDGTALEPVALVR----HCEPRLAYFAVPRYVEFVAALPKTENGKVQKFVLREQGV 523 (542)
T ss_pred eEEEEEEECCCCCCCHHHHHH----HHHhhCcCccCCcEEEEeccCCCCcccceeHHHHHhhcc
Confidence 889999988766666555555 467789999999999999999999999999999999763
No 64
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.9e-64 Score=565.83 Aligned_cols=494 Identities=21% Similarity=0.199 Sum_probs=403.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|++
T Consensus 21 a~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 92 (523)
T PRK08316 21 ARRYPDKTALVFGDR--------SWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAGAVHVPVN 92 (523)
T ss_pred HHHCCCCeEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEecc
Confidence 368899999998876 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
+.++.+++..+++.++++++++++.... ......+......+.+.... ...........+.++......
T Consensus 93 ~~~~~~~i~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 161 (523)
T PRK08316 93 FMLTGEELAYILDHSGARAFLVDPALAP------TAEAALALLPVDTLILSLVL--GGREAPGGWLDFADWAEAGSV--- 161 (523)
T ss_pred cccCHHHHHHHHHhCCCCEEEEccchHH------HHHHHhhhcCccceeeeecc--cccccccchhhHHHHHhcCCC---
Confidence 9999999999999999999999875321 11111111111111111110 001111223445554433221
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHH-hHHhhhcCc
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGA 423 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~ 423 (727)
........++++++++|||||||.||+|.++|+++++.+......+++.++|+++...|+.|..++.. ++.++..|+
T Consensus 162 --~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~~~~G~ 239 (523)
T PRK08316 162 --AEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFLGPYLYVGA 239 (523)
T ss_pred --ccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHHHHHHhcCc
Confidence 11223456789999999999999999999999999988887777889999999999999999888743 556788999
Q ss_pred EEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccc
Q 004860 424 TLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (727)
Q Consensus 424 ~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (727)
++++.+ ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||+.++.+....+.+.++++++++.
T Consensus 240 ~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 318 (523)
T PRK08316 240 TNVILD-APDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLPGLRFYNC 318 (523)
T ss_pred eEEEec-CCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcCCCceeee
Confidence 999986 4578899999999999999999999999998766566778899999999999999999999888878899999
Q ss_pred ccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCccccccccccc
Q 004860 504 CGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (727)
Q Consensus 504 YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~~~ 577 (727)
||+||++.+....... .....+++|+|+++++++|+|+++++++.|+. ||+++. .+|++ +++.++.
T Consensus 319 YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gei~v~~~~~~~~y~~------~~~~~~~ 390 (523)
T PRK08316 319 YGQTEIAPLATVLGPEEHLRRPGSAGRPVLNVETRVVDDDGNDVAPGEV--GEIVHRSPQLMLGYWD------DPEKTAE 390 (523)
T ss_pred ecccccCccccccCccccccccCCcccCCCCcEEEEEcCCCCCCCCCCc--ceEEEECCchhhhhcC------CHHHHHH
Confidence 9999998755443332 22345789999999999999999999999986 999983 34444 3334444
Q ss_pred cccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
.|. ..||+|||+|++++||+++++||.||+||++|.+|+|.+||+.|. ++|+|.+++|++.+++..+ +.++
T Consensus 391 ~~~-------~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 461 (523)
T PRK08316 391 AFR-------GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALY-THPAVAEVAVIGLPDPKWI-EAVT 461 (523)
T ss_pred Hhh-------CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHH-hCCChheEeEecccCcccC-CeEE
Confidence 442 239999999999999999999999999999999999999999995 8999999999999988777 8999
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhc
Q 004860 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 722 (727)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 722 (727)
++++++++...+.+.+ +++++++|++|++|..+++++++|+|++||++|++|++++.+.++
T Consensus 462 ~~v~~~~~~~~~~~~l----~~~~~~~l~~~~~p~~i~~v~~~p~t~~gKi~r~~l~~~~~~~~~ 522 (523)
T PRK08316 462 AVVVPKAGATVTEDEL----IAHCRARLAGFKVPKRVIFVDELPRNPSGKILKRELRERYAGAFT 522 (523)
T ss_pred EEEEECCCCCCCHHHH----HHHHHHhcccCCCCcEEEEecCCCCCCccceeHHHHHHHHHhhcc
Confidence 9999987654454444 445777899999999999999999999999999999999987654
No 65
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.9e-64 Score=581.64 Aligned_cols=504 Identities=19% Similarity=0.174 Sum_probs=374.4
Q ss_pred CCCCCCceEEEEecC-CCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWRED-RCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~-~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++|+++|+.+... .+..+.+..+||+||+++++++|++|.++ +++||+|+|+++|+++|++++|||+++|+++|||
T Consensus 53 ~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl 132 (660)
T PLN02861 53 VKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPL 132 (660)
T ss_pred HHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 478999999976310 01124456899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC--C-cEEEEcCCCCCCC---CCCCcCcccHHHHhc
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--L-KAIVLPAIGNDVG---IPLREQDLSWKDFLS 337 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~-~~~v~~~~~~~~~---~~~~~~~~~~~~~~~ 337 (727)
+|.++.+++.++|++++++++|+++... +.........+ . .++.+........ ........+|.++..
T Consensus 133 ~~~~~~~~l~~il~~s~~~~v~~~~~~~------~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02861 133 YDTLGANAVEFIINHAEVSIAFVQESKI------SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSL 206 (660)
T ss_pred cCCCCHHHHHHHHHcCCCCEEEECHHHH------HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHH
Confidence 9999999999999999999999976421 11111112111 1 2222221100000 000111245666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC-----CCCCCEEEEecccccccch
Q 004860 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-----LKVGDVYCWPTNLGWVMGP 412 (727)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-----~~~~d~~l~~~~~~~~~~~ 412 (727)
.... . .......++++++|+|||||||.||||++||++++..+......++ +.++|++++++|++|.++.
T Consensus 207 ~~~~---~--~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~ 281 (660)
T PLN02861 207 MGSL---D--CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQ 281 (660)
T ss_pred hCcc---c--CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHH
Confidence 3321 0 1112346799999999999999999999999999887765544433 4788999999999999887
Q ss_pred HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcC-----------------------------
Q 004860 413 VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----------------------------- 463 (727)
Q Consensus 413 ~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~----------------------------- 463 (727)
...+.+++.|+++++.+ .++..+++.|+++++|+++++|++++.|....
T Consensus 282 ~~~~~~l~~G~~v~~~~--~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~ 359 (660)
T PLN02861 282 VIETYCISKGASIGFWQ--GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKG 359 (660)
T ss_pred HHHHHHHHhCCEEEEeC--CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcC
Confidence 55556899999998874 46789999999999999999999999886410
Q ss_pred --------CCCCC-------Cc-cceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCcccccc
Q 004860 464 --------CLEGL-------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAF 527 (727)
Q Consensus 464 --------~~~~~-------~l-~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~i 527 (727)
..... .+ ++||.+++||+++++++.+ +...++...++|.||+||+++.++..........+++
T Consensus 360 ~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsv 438 (660)
T PLN02861 360 LKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEE-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTV 438 (660)
T ss_pred CCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHH-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCc
Confidence 00000 01 4799999999999998755 4444444579999999999764443322222345789
Q ss_pred ccCCCCceEEEEC--CCC-CcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEE
Q 004860 528 STATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR 599 (727)
Q Consensus 528 G~p~~~~~~~vld--~~~-~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~ 599 (727)
|+|+++++++|+| ++| ..++.+.. |||+| ..||++ +++.|++.|. .| ||+|||+|++
T Consensus 439 G~p~p~~ev~i~d~~~~g~~~~~~~~~--GEi~vrGp~v~~GY~~------~pe~T~~~f~-----dG--w~~TGDlg~~ 503 (660)
T PLN02861 439 GVPMTTIEARLESVPEMGYDALSDVPR--GEICLRGNTLFSGYHK------RQDLTEEVLI-----DG--WFHTGDIGEW 503 (660)
T ss_pred cCccCceEEEEEEccccCcccCCCCCc--eeEEEcCCcccccccC------CHHHHHhhhh-----cc--CcccCceEEE
Confidence 9999999999998 334 33344443 99988 456665 4446777774 13 9999999999
Q ss_pred ecCceEEEEeecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC----------CC
Q 004860 600 TVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF----------TS 668 (727)
Q Consensus 600 ~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~----------~~ 668 (727)
|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+|+|++.+ .+ +.++|+|++.... ..
T Consensus 504 d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~-~~p~V~~a~V~G~~---~~-~~~~A~vv~~~~~l~~~~~~~~~~~ 578 (660)
T PLN02861 504 QPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYS-RCPLIASIWVYGNS---FE-SFLVAVVVPDRQALEDWAANNNKTG 578 (660)
T ss_pred CCCCcEEEEeccccceEcCCCeEEcHHHHHHHHh-cCCCeeEEEEEecC---Cc-ceeEEEEEcCHHHHHHHHHHcCCCC
Confidence 999999999999999997 799999999999995 99999999999875 23 6899999986320 01
Q ss_pred ChH------HHHHHHHHHHHh-----hcCCCcccceEEEcC-CC-----CCCCCchhhHHHHHHHHhhhhcc
Q 004860 669 QPD------KLKMIFSKAIQS-----KLNPLFKVSLVKVVP-EF-----PRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 669 ~~~------~l~~~l~~~l~~-----~L~~~~~P~~i~~v~-~l-----P~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
+.. .....+.+.+.+ .|+.|.+++.|.+++ .+ .+|+++|+.|+.+.+.|++++++
T Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~~ 650 (660)
T PLN02861 579 DFKSLCKNLKARKYILDELNSTGKKLQLRGFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCIDQ 650 (660)
T ss_pred CHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHHH
Confidence 111 122334444432 589999999998865 56 79999999999999999988874
No 66
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.8e-64 Score=570.30 Aligned_cols=508 Identities=16% Similarity=0.177 Sum_probs=395.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
..+||++|+++.+. ..+.+||+||.++++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|++
T Consensus 21 ~~~~~~~a~~~~~~-----~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 21 TVHGDTTVTTWGGA-----EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAVACMGAVFNPLN 95 (576)
T ss_pred HhCCCceEEEEcCC-----ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcCCEEeecc
Confidence 68999999998542 23589999999999999999997 6 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCC---CCCCCcCcccHHHHhccc
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDV---GIPLREQDLSWKDFLSSV 339 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~ 339 (727)
|.++.+++.+++++++++++|+++... ..........+. .++++....... .........+|.++....
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 169 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLA------EQLGEILKECPCVRAVVFIGPSDADSAAAHMPEGIKVYSYEALLDGR 169 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhH------HHHHHHHhhCccccEEEEecCcccccchhccccccccccHHHHhhcC
Confidence 999999999999999999999987432 112222222222 122222111000 000111234577776532
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhh--chhcCCCCCCEEEEecccccccchHHhHH
Q 004860 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG--WAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (727)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~--~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (727)
.. ........++++++++|||||||.||||+++|+++....... ...+++.++|++++.+|+.|+++....+.
T Consensus 170 ~~-----~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~ 244 (576)
T PRK05620 170 ST-----VYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVLSWGVPLA 244 (576)
T ss_pred CC-----cCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhhhhHHHHH
Confidence 21 112233567899999999999999999999999986544322 23577899999999999999999887889
Q ss_pred hhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCC
Q 004860 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWY 497 (727)
Q Consensus 418 ~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~ 497 (727)
++..|+++++.+...++..++++|+++++|++..+|+++..|+........+..+||.+++||+++++++.+++...+ +
T Consensus 245 ~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-~ 323 (576)
T PRK05620 245 AFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKAWEERY-G 323 (576)
T ss_pred HHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHHHHHHh-C
Confidence 999999999987666888999999999999999999999988765433334456899999999999999988887665 5
Q ss_pred CcccccccccccccccccCCCCC---C----ccccccccCCCCceEEEECCCCCcCC--CCCCeeeeEEE-----ecccC
Q 004860 498 NAIIESCGGTELSSAYIQGSLLQ---P----QAFGAFSTATMTAGLVILDECGVPYP--DDQPCVGEVGL-----FPLYL 563 (727)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~---~----~~~~~iG~p~~~~~~~vld~~~~~~p--~G~~giGel~v-----~~~y~ 563 (727)
+++++.||+||++...+...... . ....++|++.++++++|+|+ +++++ .|. +|||++ ..||+
T Consensus 324 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~-g~~~~~~~~~--~Gel~v~g~~~~~gY~ 400 (576)
T PRK05620 324 VDVVHVWGMTETSPVGTVARPPSGVSGEARWAYRVSQGRFPASLEYRIVND-GQVMESTDRN--EGEIQVRGNWVTASYY 400 (576)
T ss_pred CceeeeccccccccceeeeccCCccccccccccccccCCcCCceeEEEecC-CccccCCCCC--ceEEEEEcCccccccc
Confidence 78999999999986544332211 0 12347899999999999998 77765 355 499998 45666
Q ss_pred CCCccccccccccccccccccC------CCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCC
Q 004860 564 GASDRLLNADHEEVYFRGMPMY------KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADES 637 (727)
Q Consensus 564 ~~~~~~~~~~~~~~~f~~~p~~------~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~ 637 (727)
+.++.. .......|..+++. ...+||+|||+|++++||+++|+||.||+||++|.+|+|.|||++|. +||.
T Consensus 401 ~~~~~t--~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~l~-~~p~ 477 (576)
T PRK05620 401 HSPTEE--GGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENYIM-AAPE 477 (576)
T ss_pred CCcccc--ccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHHHh-cCCC
Confidence 644311 01114455443321 12359999999999999999999999999999999999999999996 8999
Q ss_pred ceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHH
Q 004860 638 ILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQI 717 (727)
Q Consensus 638 V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~ 717 (727)
|.+|+|++.+++..| +.++++++..++...+ +...+.|+++++++|++|++|+.|+++++||+|+|||++|++|++++
T Consensus 478 v~~~~vv~~~~~~~g-~~~~a~v~~~~~~~~~-~~~~~~l~~~l~~~L~~~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~ 555 (576)
T PRK05620 478 VVECAVIGYPDDKWG-ERPLAVTVLAPGIEPT-RETAERLRDQLRDRLPNWMLPEYWTFVDEIDKTSVGKFDKKDLRQHL 555 (576)
T ss_pred ceEEEEEeccCCCcC-ceeEEEEEecCCCCcc-cccHHHHHHHHHhhCccccCCeEEEEeccCCCCCcccCcHHHHHHHH
Confidence 999999999998887 8899999988764432 12234566678889999999999999999999999999999999998
Q ss_pred hh
Q 004860 718 KH 719 (727)
Q Consensus 718 ~~ 719 (727)
++
T Consensus 556 ~~ 557 (576)
T PRK05620 556 AD 557 (576)
T ss_pred hc
Confidence 74
No 67
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.7e-64 Score=561.06 Aligned_cols=464 Identities=23% Similarity=0.256 Sum_probs=384.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+.++||++|+++.++ .+||+||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 12 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~i~ 83 (483)
T PRK03640 12 AFLTPDRTAIEFEEK--------KVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVLLN 83 (483)
T ss_pred HHhCCCceEEEeCCe--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEecC
Confidence 478999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
+.++.+++..++++++++++++++..... .... ....|+++......
T Consensus 84 ~~~~~~~~~~~~~~~~~~~vi~~~~~~~~---------~~~~---------------------~~~~~~~~~~~~~~--- 130 (483)
T PRK03640 84 TRLSREELLWQLDDAEVKCLITDDDFEAK---------LIPG---------------------ISVKFAELMNGPKE--- 130 (483)
T ss_pred cCCCHHHHHHHHHhCCCCEEEEcchhhHH---------Hhhh---------------------ccccHHHHhhcccc---
Confidence 99999999999999999999998743210 0000 01113333322111
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcE
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (727)
.........++++++++|||||||.||+|+++|+++...+......++++++|++++..|+.|..++..++.++..|++
T Consensus 131 -~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~ 209 (483)
T PRK03640 131 -EAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMR 209 (483)
T ss_pred -cCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCE
Confidence 0111223457899999999999999999999999988877766677899999999999999999988778899999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+++.+ ..++..+++.|+++++|++.++|+++..|....... ....+||.+++||+++++...+++... ++++++.|
T Consensus 210 ~~~~~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-~~~~~lr~~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 285 (483)
T PRK03640 210 VVLVE-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-TYPSSFRCMLLGGGPAPKPLLEQCKEK--GIPVYQSY 285 (483)
T ss_pred EEecC-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc-ccCCcceEEEEcCCCCCHHHHHHHHHh--CCCeeeee
Confidence 99987 467899999999999999999999999998653322 234689999999999999988877664 68899999
Q ss_pred cccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccccccc
Q 004860 505 GGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (727)
Q Consensus 505 G~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~ 578 (727)
|+||++..+...... .....+++|+|+++++++|.|+. +++|.|+. |||++ ..||++.+ +.+...
T Consensus 286 G~tE~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~~~~-~~~~~g~~--Gel~v~g~~~~~gy~~~~------~~~~~~ 356 (483)
T PRK03640 286 GMTETASQIVTLSPEDALTKLGSAGKPLFPCELKIEKDG-VVVPPFEE--GEIVVKGPNVTKGYLNRE------DATRET 356 (483)
T ss_pred ccCcccccccccCcccccccCCCcccccCCcEEEEecCC-CcCCCCCc--eEEEEECcchhhhhcCCH------HHHHHH
Confidence 999987644333322 23456789999999999999864 89999996 99999 34555532 344444
Q ss_pred ccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEE
Q 004860 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (727)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a 658 (727)
|. . .||+|||++++++||+++++||+||+||++|.+|++.|||+++. .+|+|.+++|++.+++..+ +.+++
T Consensus 357 ~~-----~--~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~ 427 (483)
T PRK03640 357 FQ-----D--GWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLL-SHPGVAEAGVVGVPDDKWG-QVPVA 427 (483)
T ss_pred Hh-----c--CCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHH-hCCCeeEEEEEeCCCcccC-CceEE
Confidence 43 1 28999999999999999999999999999999999999999995 8999999999998887776 78888
Q ss_pred EEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 659 FVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 659 ~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
+++... ..+.+++++ ++++.|++|++|..|+.+++||+|++||++|++|++++++
T Consensus 428 ~~~~~~--~~~~~~l~~----~~~~~l~~~~~p~~i~~~~~iP~t~~gK~~r~~l~~~~~~ 482 (483)
T PRK03640 428 FVVKSG--EVTEEELRH----FCEEKLAKYKVPKRFYFVEELPRNASGKLLRHELKQLVEE 482 (483)
T ss_pred EEEeCC--CCCHHHHHH----HHHHhccCCCCCcEEEEeCCCCCCCccceeHHHHHHHHhh
Confidence 888543 345555544 5778899999999999999999999999999999998864
No 68
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.9e-63 Score=559.84 Aligned_cols=481 Identities=21% Similarity=0.231 Sum_probs=391.8
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC
Q 004860 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (727)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~ 266 (727)
.+|+++|+.+.+. +.+||.||.++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 14 ~~~~~~a~~~~~~-------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~v~l~~~ 86 (504)
T PRK07514 14 ADRDAPFIETPDG-------LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVFLPLNTA 86 (504)
T ss_pred hCCCCeEEEeCCC-------CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEECCCC
Confidence 7899999987444 2899999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc-EEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
++.+++..++++++++++++++... .....+....... .+.+... ....+.+......
T Consensus 87 ~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~----- 145 (504)
T PRK07514 87 YTLAELDYFIGDAEPALVVCDPANF------AWLSKIAAAAGAPHVETLDAD----------GTGSLLEAAAAAP----- 145 (504)
T ss_pred CCHHHHHHHHHhCCCcEEEEccchh------HHHHHhhhccCCceEEEecCC----------CcccHHHhhhhcC-----
Confidence 9999999999999999999987532 1111221111111 2222111 0111222221111
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcE
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~ 424 (727)
.........+++++||+|||||||.||+|+++|+++++.+......+++.++|++++..|+.|..++ +.++.++..|++
T Consensus 146 ~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~ 225 (504)
T PRK07514 146 DDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGAS 225 (504)
T ss_pred cccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCcE
Confidence 1112234467899999999999999999999999999988877778889999999999999998887 457889999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+++.+ ..++..+++.+ .++|++..+|+++..++.........++++|.+++||++++++..+++...+ ++++++.|
T Consensus 226 ~~~~~-~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~Y 301 (504)
T PRK07514 226 MIFLP-KFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERT-GHAILERY 301 (504)
T ss_pred EEECC-CCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHh-CCcceeec
Confidence 99886 45778888888 3799999999999999887655566788999999999999999988888765 57899999
Q ss_pred cccccccccccCCCCCCccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccccccc
Q 004860 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVY 578 (727)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~ 578 (727)
|+||++...+. ........+++|.|+++++++|+| ++++++|.|+. |||++ ..||++ +++.+++.
T Consensus 302 G~tE~~~~~~~-~~~~~~~~~~~G~~~~~~~v~i~d~~~~~~~~~g~~--Gel~i~~~~~~~gy~~------~~~~~~~~ 372 (504)
T PRK07514 302 GMTETNMNTSN-PYDGERRAGTVGFPLPGVSLRVTDPETGAELPPGEI--GMIEVKGPNVFKGYWR------MPEKTAEE 372 (504)
T ss_pred ccccccccccC-CccccccCcccccCCCCcEEEEEECCCCCCCCCCCc--eEEEEecCCccccccC------Cchhhhhh
Confidence 99998764332 222233456899999999999999 88999999986 99998 345555 33355556
Q ss_pred ccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEE
Q 004860 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (727)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a 658 (727)
|..+ .||+|||+|+++++|+++++||+||+||++|++|+|.|||+++. .+++|.+++|++.++...+ +.+++
T Consensus 373 ~~~~------~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~ 444 (504)
T PRK07514 373 FRAD------GFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEID-ELPGVVESAVIGVPHPDFG-EGVTA 444 (504)
T ss_pred cccC------CCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHH-hCCCeeEEEEEeCCCCCcC-ceEEE
Confidence 6532 29999999999999999999999999999999999999999995 8999999999999887777 88999
Q ss_pred EEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhh
Q 004860 659 FVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 721 (727)
Q Consensus 659 ~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 721 (727)
+++..++...+.+++. +.++++|++|++|..+++++++|+|++||++|++|++++.+.+
T Consensus 445 ~~~~~~~~~~~~~~l~----~~~~~~l~~~~~p~~i~~v~~~p~t~~gK~~r~~l~~~~~~~~ 503 (504)
T PRK07514 445 VVVPKPGAALDEAAIL----AALKGRLARFKQPKRVFFVDELPRNTMGKVQKNLLREQYADLF 503 (504)
T ss_pred EEEECCCCCCCHHHHH----HHHHhhcccCCCCcEEEEeccCCCCCCcceeHHHHHHHHHhhc
Confidence 9998876555555544 4577788999999999999999999999999999999987654
No 69
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.2e-63 Score=563.98 Aligned_cols=484 Identities=19% Similarity=0.223 Sum_probs=386.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+|+++|+++.+. ++||+||.++++++|..|.+. +++|++|+++++|++++++++|||+++|+++++++
T Consensus 33 a~~~p~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~~~ 104 (527)
T TIGR02275 33 AARYPDAIAIICGNR--------QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIAPVLAL 104 (527)
T ss_pred HHHCCCceEEEeCCc--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeEEeccc
Confidence 368999999998766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
+.++.+++.+++++++++++++++.... .........+....+. ...++.... . ........+.....
T Consensus 105 ~~~~~~~~~~~l~~~~~~~li~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~-- 173 (527)
T TIGR02275 105 FSHRKSELTAYAQQIEPALYIIDRAHSL-FDYDAFARQLQSKLPTLRNIIVAGQT-R-------VEAELFLWLESPAE-- 173 (527)
T ss_pred cccCHHHHHHHHHhcCCcEEEEcCcccc-cchHHHHHHHHhhCCcceEEEEecCC-C-------CcchhhHHhhCcCc--
Confidence 9999999999999999999999864310 0000011111111221 112221110 0 00011111111111
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchH--HhHHhhhc
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLN 421 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~ 421 (727)
........++++++++|||||||.||||+++|+++...+......+.++++|++++.+|+.|.+++. .++.++..
T Consensus 174 ---~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~ 250 (527)
T TIGR02275 174 ---PVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPGALGVFYA 250 (527)
T ss_pred ---cccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhc
Confidence 1112244678999999999999999999999999998888777788899999999999999988874 47889999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
|+++++.+ ..++..+++.|+++++|++.++|++++.|.+.......+++++|.+++||+++++++..++.+.+ +++++
T Consensus 251 G~~~v~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-g~~~~ 328 (527)
T TIGR02275 251 GGCVVLAP-DPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVPAVF-GCQLQ 328 (527)
T ss_pred CCeEEECC-CCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHHHHh-CCeEE
Confidence 99998865 46788899999999999999999999999877655566788999999999999999998887766 57899
Q ss_pred ccccccccccccccCCCCCCccccccccCC-CCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccc
Q 004860 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHE 575 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~ 575 (727)
+.||+||+++++...........+++|+|+ ++..++|+|++|+++|.|+. |||++ ..||++. ++.+
T Consensus 329 ~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~v~i~d~~g~~~~~g~~--Gei~v~g~~~~~gY~~~------~~~~ 400 (527)
T TIGR02275 329 QVFGMAEGLVNYTRLDDPAEIIFTTQGRPMSPDDEVRVVDDHGNPVAPGET--GMLLTRGPYTFRGYYKA------PEHN 400 (527)
T ss_pred eeeccCccCccccCCCCccccccccCCCCCCCCceEEEECCCCCCCCCCCc--eEEEecCCccchhhcCC------hhHh
Confidence 999999976543322222223446889999 48899999999999999986 99998 3455553 3345
Q ss_pred cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceE
Q 004860 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (727)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~ 655 (727)
...|..+ .||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+++|++.++...+ +.
T Consensus 401 ~~~~~~d------g~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~ 472 (527)
T TIGR02275 401 AAAFDAE------GFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLL-AHPAVHDAALVSMPDELLG-EK 472 (527)
T ss_pred HhhcCcC------CCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHH-hCCCceEEEEEecCCcccc-cE
Confidence 4455432 39999999999999999999999999999999999999999995 9999999999999998877 89
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHh-hcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQS-KLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~l~~-~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
+++||+++++ ..+..++++ .+++ ++++|++|..++++++||+|++||++|+.|+
T Consensus 473 ~~a~vv~~~~-~~~~~~l~~----~l~~~~l~~~~~P~~i~~v~~iP~t~sGKv~r~~L~ 527 (527)
T TIGR02275 473 SCAFIVVRDP-ALKAAQLRR----FLRERGLAEYKLPDRVEFIDSLPLTAVGKIDKKALR 527 (527)
T ss_pred EEEEEEECCC-CCCHHHHHH----HHHhCCCccccCCCEEEEeccCCCCCccceeHHhcC
Confidence 9999998765 344455554 5665 4999999999999999999999999999874
No 70
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.5e-63 Score=556.40 Aligned_cols=470 Identities=21% Similarity=0.254 Sum_probs=380.6
Q ss_pred CCCCCCCceEEEE--ecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEe
Q 004860 185 HRRKEDNTVAIVW--REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVV 261 (727)
Q Consensus 185 ~a~~~pd~~Al~~--~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~v 261 (727)
+++.+||++|+.+ .+. .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++
T Consensus 4 ~a~~~p~~~a~~~~~~~~--------~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v 75 (488)
T PRK09088 4 HARLQPQRLAAVDLALGR--------RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYV 75 (488)
T ss_pred hhhhCCCceEEEecCCCc--------EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEE
Confidence 3468899999986 333 899999999999999999999 99999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCC
Q 004860 262 SIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 262 pl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (727)
|+++.++.+++.+++++++++++|+++...... ....+++++......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~--------------------------------~~~~~~~~~~~~~~~ 123 (488)
T PRK09088 76 PLNWRLSASELDALLQDAEPRLLLGDDAVAAGR--------------------------------TDVEDLAAFIASADA 123 (488)
T ss_pred eeCccCCHHHHHHHHHhCCCCEEEEcchhhccc--------------------------------ccccchhhhhhhccc
Confidence 999999999999999999999999986432100 001112222111110
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchH-HhHHhhh
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV-ILFSSFL 420 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~l~ 420 (727)
. .........++++++++|||||||.||+|+++|+++...+........+.++|++++..|+.|.+++. .++.++.
T Consensus 124 ~---~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~ 200 (488)
T PRK09088 124 L---EPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLA 200 (488)
T ss_pred c---ccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHh
Confidence 0 00111233568899999999999999999999999988777666667788999999999999998884 4667888
Q ss_pred cCcEEEEecCCCChhhHHHHHH--HhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCC
Q 004860 421 NGATLALYQGSPLERSFGKFVQ--DAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYN 498 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~--~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~ 498 (727)
.|+++++.+ ...+..++..+. ++++|++.++|+++..+.........++++||.+++||++++......+... ++
T Consensus 201 ~g~~~~~~~-~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~--g~ 277 (488)
T PRK09088 201 VGGSILVSN-GFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDD--GI 277 (488)
T ss_pred cCCEEEEcC-CCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHh--CC
Confidence 999998875 456677777775 4799999999999999987654445567899999999999998877666543 67
Q ss_pred cccccccccccccccccCCC--CCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCccccc
Q 004860 499 AIIESCGGTELSSAYIQGSL--LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLN 571 (727)
Q Consensus 499 ~l~n~YG~TE~~~~~~~~~~--~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~ 571 (727)
++++.||+||++..+..... ......+++|+|++++.++|+|+++++++.|+. |||++. .||++.
T Consensus 278 ~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gY~~~------ 349 (488)
T PRK09088 278 PMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIPTPTVQTRVVDDQGNDCPAGVP--GELLLRGPNLSPGYWRR------ 349 (488)
T ss_pred ceeeeecccccccccccCCCcccccccCCccccCCCCcEEEEECCCCCCCcCCCc--eEEEEECCccchhhcCC------
Confidence 89999999999864432211 112345789999999999999999999999986 999993 455543
Q ss_pred cccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCC
Q 004860 572 ADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGG 651 (727)
Q Consensus 572 ~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~ 651 (727)
++.++..|.. ..||+|||+|+++++|++++.||.||+||++|++|+|.|||++|. .+|+|.+++|++.+++..
T Consensus 350 ~~~~~~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~-~~~~v~~~~v~~~~~~~~ 422 (488)
T PRK09088 350 PQATARAFTG------DGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLA-DHPGIRECAVVGMADAQW 422 (488)
T ss_pred hhhhhhhhcC------CCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHH-hCCCcceEEEEeCCCccC
Confidence 3344444432 249999999999999999999999999999999999999999995 899999999999988776
Q ss_pred CceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 652 GPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 652 ~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+ +..+++|+++++...+.+++ ++.+++.+++|++|..|+++++||+|++||++|++|++++.+.
T Consensus 423 g-~~~~~~v~~~~~~~~~~~~l----~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 423 G-EVGYLAIVPADGAPLDLERI----RSHLSTRLAKYKVPKHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred C-ceeEEEEEECCCCCCCHHHH----HHHHHhhCcCCCCCCEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 7 78889999876554444444 4457778899999999999999999999999999999988654
No 71
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.5e-63 Score=564.12 Aligned_cols=497 Identities=22% Similarity=0.262 Sum_probs=395.0
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+++||++|+++.++ +++||+||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|++|
T Consensus 34 ~~~pd~~a~~~~~~-------~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 34 RAMPDKIAVVDNHG-------ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred HHCCCceEEEcCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccch
Confidence 67999999997652 2899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
.++.+++.+++++++++++++++..... ...+.........+. .++.+..... .....++.+++.....
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-- 177 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAPTLFKQT-RPVDLILPLQNQLPQLQQIVGVDKLAP------ATSSLSLSQIIADYEP-- 177 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEecccccc-cHHHHHHHHHhhCCCCcEEEEeCCcCC------CcCccCHHHHhccCCc--
Confidence 9999999999999999999998643211 111111122222222 2222221110 0122345555443221
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcC
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G 422 (727)
........++++++|+|||||||.||||+++|++++.........+++.++|++++..|+.|.+++ ..++.++..|
T Consensus 178 ---~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~g 254 (547)
T PRK06087 178 ---LTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIG 254 (547)
T ss_pred ---ccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHHHHHHHHhcC
Confidence 011223467899999999999999999999999998887777777889999999999999999887 4578889999
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
+++++.+ ..++..+++.|+++++|++..+|+.+..++........++++||.+++||+++++++.+.+... ++++++
T Consensus 255 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~~~--~~~l~~ 331 (547)
T PRK06087 255 ARSVLLD-IFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQQR--GIKLLS 331 (547)
T ss_pred CEEEecC-CCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHHHc--CCcEEE
Confidence 9999876 4678899999999999999988777777766544455678899999999999999988776653 789999
Q ss_pred cccccccccccccCCCCC-CccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccccc
Q 004860 503 SCGGTELSSAYIQGSLLQ-PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEE 576 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~-~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~ 576 (727)
.||+||++.......... ....+++|+|++++.++|+|++++++|.|+. ||+++ ..||++. ++.+.
T Consensus 332 ~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~gy~~~------~~~~~ 403 (547)
T PRK06087 332 VYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDEARKTLPPGCE--GEEASRGPNVFMGYLDE------PELTA 403 (547)
T ss_pred EecccccCCccccCCCcchhhcCCcCCccCCCceEEEEcCCCCCCcCCCc--ceEEEecccccccccCC------HHHHH
Confidence 999999986544332211 1234578999999999999999999999986 99988 3455553 23444
Q ss_pred ccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEE
Q 004860 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (727)
Q Consensus 577 ~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l 656 (727)
..|.. ..||+|||+++++++|+++++||.||+||++|.+|+|.+||++|. .+|+|.+++|++.+++..+ +++
T Consensus 404 ~~~~~------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~-~~~~v~~~~v~~~~~~~~g-~~~ 475 (547)
T PRK06087 404 RALDE------EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILL-QHPKIHDACVVAMPDERLG-ERS 475 (547)
T ss_pred HHhCC------CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHH-hCCCeeEEEEEecCCCCcC-ceE
Confidence 44432 239999999999999999999999999999999999999999996 8999999999999988777 899
Q ss_pred EEEEEecC-CCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhccc
Q 004860 657 VIFVVLKK-GFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSVR 724 (727)
Q Consensus 657 ~a~vv~~~-~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~~ 724 (727)
+++++..+ +...+.+++.+++. ++.|++|++|..|.++++||+|+|||++|+.|++++.+.+...
T Consensus 476 ~~~v~~~~~~~~~~~~~~~~~~~---~~~l~~~~~P~~i~~v~~iP~t~sGK~~r~~l~~~~~~~~~~~ 541 (547)
T PRK06087 476 CAYVVLKAPHHSLTLEEVVAFFS---RKRVAKYKYPEHIVVIDKLPRTASGKIQKFLLRKDIMRRLTQD 541 (547)
T ss_pred EEEEEECCCCCCCCHHHHHHHHH---hccccccCCCeEEEEeccCCCCCCCcCcHHHHHHHHHHHhhhh
Confidence 99999876 33444444444322 3689999999999999999999999999999999998886654
No 72
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=3.8e-63 Score=560.50 Aligned_cols=486 Identities=19% Similarity=0.230 Sum_probs=391.2
Q ss_pred CCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCC
Q 004860 190 DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA 268 (727)
Q Consensus 190 pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~ 268 (727)
||++|+++.+. .+||+||.++++++|+.|.+. +++|++|+++++|++++++++|||+++|++++++++..+
T Consensus 37 p~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~v~~~~~~~ 108 (536)
T PRK10946 37 SDAIAVICGER--------QFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAPVNALFSHQ 108 (536)
T ss_pred CCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEEecCCcccc
Confidence 99999998776 899999999999999999999 999999999999999999999999999998888777788
Q ss_pred HHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCC
Q 004860 269 AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNY 347 (727)
Q Consensus 269 ~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (727)
..++..++++++++++++++.... ...-.....+....+. ..+++... .....+.+.+..... .
T Consensus 109 ~~~~~~~~~~~~~~~li~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-----~ 173 (536)
T PRK10946 109 RSELNAYASQIEPALLIADRQHAL-FSDDDFLNTLVAEHSSLRVVLLLND---------DGEHSLDDAINHPAE-----D 173 (536)
T ss_pred HHHHHHHHhhcCCCEEEEeccccc-cchHHHHHHHHhhCCCceEEEEecC---------CCCccHHHHhhCccc-----c
Confidence 889999999999999999864210 0000111222222222 22222211 112234444433221 1
Q ss_pred CCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchH--HhHHhhhcCcEE
Q 004860 348 YSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPV--ILFSSFLNGATL 425 (727)
Q Consensus 348 ~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~--~~~~~l~~G~~l 425 (727)
.......++++++++|||||||.||||+++|+++...+......++++++|++++..|+.|.+++. .++.+|..|+++
T Consensus 174 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~ 253 (536)
T PRK10946 174 FTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTV 253 (536)
T ss_pred cccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEE
Confidence 112344678999999999999999999999999999888887888999999999999999987763 578899999999
Q ss_pred EEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhc--CCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccc
Q 004860 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--NCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (727)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~--~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (727)
++.+ ..++..++++++++++|++.++|+++..|++. .......+++||.+++||+++++++.+.+.+.+ ++++++.
T Consensus 254 ~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~~~~~-g~~~~~~ 331 (536)
T PRK10946 254 VLAP-DPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRIPAEL-GCQLQQV 331 (536)
T ss_pred EECC-CCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHHHHhc-CCeEEEe
Confidence 8865 45778899999999999999999999999875 222334578999999999999999988887665 6899999
Q ss_pred ccccccccccccCCCCCCccccccccCC-CCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccc
Q 004860 504 CGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEV 577 (727)
Q Consensus 504 YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~ 577 (727)
||+||+++.++..........+++|+|+ +++.++|+|+++++++.|+. |||++ ..||++. ++.+..
T Consensus 332 YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~~v~i~d~~~~~~~~g~~--Gel~v~g~~~~~GY~~~------~~~t~~ 403 (536)
T PRK10946 332 FGMAEGLVNYTRLDDSDERIFTTQGRPMSPDDEVWVADADGNPLPQGEV--GRLMTRGPYTFRGYYKS------PQHNAS 403 (536)
T ss_pred ecccccceeeecCCCccccccccCCcccCCCceEEEECCCCCCCCCCCc--cEEEEecCccchhhcCC------cccchh
Confidence 9999976544332222223456899998 78999999999999999996 99998 4556653 345666
Q ss_pred cccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
.|..+ +||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+++|++.++...+ +.++
T Consensus 404 ~~~~d------~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~ 475 (536)
T PRK10946 404 AFDAN------GFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLL-RHPAVIHAALVSMEDELMG-EKSC 475 (536)
T ss_pred hcccC------CceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHH-hCCCcceEEEEcCCCcccC-ceEE
Confidence 66543 38999999999999999999999999999999999999999996 9999999999999988777 8899
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhh-cCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhc
Q 004860 658 IFVVLKKGFTSQPDKLKMIFSKAIQSK-LNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELS 722 (727)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~-L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~ 722 (727)
++++++++ .+.++++++ +++. |++|++|..+++++++|+|++||++|++|++++.....
T Consensus 476 a~vv~~~~--~~~~~l~~~----~~~~~l~~~~~P~~~~~~~~iP~t~~GKv~r~~L~~~~~~~~~ 535 (536)
T PRK10946 476 AFLVVKEP--LKAVQLRRF----LREQGIAEFKLPDRVECVDSLPLTAVGKVDKKQLRQWLASRAS 535 (536)
T ss_pred EEEEeCCC--CCHHHHHHH----HHhCCccccccCcEEEEeccCCCCCCCcccHHHHHHHHHhhcc
Confidence 99998764 555555554 5554 99999999999999999999999999999998876543
No 73
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.3e-63 Score=560.32 Aligned_cols=495 Identities=19% Similarity=0.239 Sum_probs=390.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|++.... +..+++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~~~~~~~~~~~~----~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~v~l~ 95 (542)
T PRK06018 20 ARIHGNREVVTRSVE----GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGIMGIGAICHTVN 95 (542)
T ss_pred HHhCCCceEEEeecc----CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHHHhcCeEeeccc
Confidence 478999999985322 2235899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
|.++.+++..+++++++++++++..+. +.+..+....+. ..+++..... .......+...|.+++.....
T Consensus 96 ~~~~~~~l~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 167 (542)
T PRK06018 96 PRLFPEQIAWIINHAEDRVVITDLTFV------PILEKIADKLPSVERYVVLTDAAH-MPQTTLKNAVAYEEWIAEADG- 167 (542)
T ss_pred cccCHHHHHHHHhccCCCEEEEccccH------HHHHHHHhhCCCccEEEEeccccc-ccccCccccccHHHHhccCCc-
Confidence 999999999999999999999987532 222222222221 2222221111 100111123356665544321
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHH-H-HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhh
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI-R-CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFL 420 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~-~-~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~ 420 (727)
........++++++++|||||||.||||++||++.+ + ........+++..+|+++...|+.|+.++...+.++.
T Consensus 168 ----~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~~~~~~~~~~ 243 (542)
T PRK06018 168 ----DFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANSWGIAFSAPS 243 (542)
T ss_pred ----ccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhhhHHHHhhhh
Confidence 111223466889999999999999999999999743 2 2233345678899999999999999888766778899
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
.|+++++.....++..++++++++++|++.++|+++..|.+.......++++||.+++|||+++++..+++.+ .++++
T Consensus 244 ~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~--~~~~~ 321 (542)
T PRK06018 244 MGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKAFED--MGVEV 321 (542)
T ss_pred cCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHHHHH--hCCCe
Confidence 9999998765667888999999999999999999999998765555567889999999999999999988887 47899
Q ss_pred cccccccccccccccCCCCCC----------ccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCC
Q 004860 501 IESCGGTELSSAYIQGSLLQP----------QAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGA 565 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~----------~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~ 565 (727)
++.||+||++.+.+.+..... ....++|+|.++++++|+|++++++|.+...+||+++. .||++
T Consensus 322 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~~~~~~~~~~Gel~i~g~~~~~gy~~- 400 (542)
T PRK06018 322 RHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGKELPWDGKTFGRLKVRGPAVAAAYYR- 400 (542)
T ss_pred EeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCCCCCCCCCceeEEEEecCCcchhhhc-
Confidence 999999999865543321110 11357899999999999999999998753235999983 33333
Q ss_pred CccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEe
Q 004860 566 SDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAIS 645 (727)
Q Consensus 566 ~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~ 645 (727)
. +...+. ...||+|||++++++||++++.||.||+||++|++|++.|||+++. +||+|.+|+|++
T Consensus 401 ------~--~~~~~~------~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~ 465 (542)
T PRK06018 401 ------V--DGEILD------DDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAV-GHPKVAEAAVIG 465 (542)
T ss_pred ------C--cccEec------CCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHH-hCCcceeEEEEe
Confidence 1 111221 2349999999999999999999999999999999999999999995 899999999999
Q ss_pred ecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 646 VSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 646 ~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
.+++..+ +.++++|++.++...+.+++.+ .++++|++|++|..++++++||+|++||++|++|++++.+
T Consensus 466 ~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~L~~~~~~ 534 (542)
T PRK06018 466 VYHPKWD-ERPLLIVQLKPGETATREEILK----YMDGKIAKWWMPDDVAFVDAIPHTATGKILKTALREQFKD 534 (542)
T ss_pred ccCCCcC-ceeEEEEEeCCCCCCCHHHHHH----HHHhhCccccCCcEEEEeccCCCCCcchhhHHHHHHHHhc
Confidence 9988777 8899999988776666555554 5667899999999999999999999999999999999876
No 74
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-63 Score=562.76 Aligned_cols=499 Identities=20% Similarity=0.206 Sum_probs=401.2
Q ss_pred ccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 004860 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (727)
Q Consensus 173 ~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~l 251 (727)
.|..+.... .++.+||++|+++.+. .+||.||.++++++|++|.+. +++||+|+|+++|+++++++++
T Consensus 17 ~n~~~~~~~---~a~~~~~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~ 85 (542)
T PRK07786 17 QNWVNQLAR---HALMQPDAPALRFLGN--------TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVL 85 (542)
T ss_pred cCHHHHHHH---HHHHCCCCeEEEeCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 355544332 2367899999998877 899999999999999999999 9999999999999999999999
Q ss_pred HHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCc
Q 004860 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQD 329 (727)
Q Consensus 252 A~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~ 329 (727)
||+++|++++|+++.++.+++..++++++++++++++... +.........+. ..+++... ...+.
T Consensus 86 a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 152 (542)
T PRK07786 86 AANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALA------PVATAVRDIVPLLSTVVVAGGS-------SDDSV 152 (542)
T ss_pred HHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchH------HHHHHhhhccCccceEEEecCC-------Ccccc
Confidence 9999999999999999999999999999999999987532 111111111111 12222110 01123
Q ss_pred ccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCC-CCCCEEEEeccccc
Q 004860 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDL-KVGDVYCWPTNLGW 408 (727)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~-~~~d~~l~~~~~~~ 408 (727)
.++.+++..... .........+++++++|||||||.||||+++|+++.+.+......+++ ..++++++..|+.|
T Consensus 153 ~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (542)
T PRK07786 153 LGYEDLLAEAGP-----AHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFH 227 (542)
T ss_pred cCHHHHhhccCC-----CCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHH
Confidence 456666543322 112223456789999999999999999999999998888776666777 67889999999999
Q ss_pred ccchHHhHHhhhcCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhh
Q 004860 409 VMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDD 487 (727)
Q Consensus 409 ~~~~~~~~~~l~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~ 487 (727)
.+++..++.++..|+++++.+. ..++..+++.|+++++|+++++|+++..|.........+ .++|.+++||++++++.
T Consensus 228 ~~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~-~~lr~i~~gg~~~~~~~ 306 (542)
T PRK07786 228 IAGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRD-LALRVLSWGAAPASDTL 306 (542)
T ss_pred HHHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccC-cceEEEEECCCCCCHHH
Confidence 9888889999999999999752 457889999999999999999999999998765433333 37999999999999999
Q ss_pred HHHHHhhCCCCcccccccccccccccccCCCC-CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecc
Q 004860 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGSLL-QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPL 561 (727)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~-~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~ 561 (727)
.+++.+.++++++++.||+||++...+..... .....+++|+|++++.++|+|+++++++.|+. |||++ ..|
T Consensus 307 ~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~g 384 (542)
T PRK07786 307 LRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIRKLGSVGKVIPTVAARVVDENMNDVPVGEV--GEIVYRAPTLMSG 384 (542)
T ss_pred HHHHHHHcCCCeEEeeecccccccceEecCcccccccCCCccccCCCceEEEECCCCCCCcCCCc--eEEEEEChhhhhh
Confidence 99999888889999999999998654332221 12344689999999999999999999999985 99998 355
Q ss_pred cCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceee
Q 004860 562 YLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILET 641 (727)
Q Consensus 562 y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a 641 (727)
|++. ++.+...|. . .||+|||++++++||+++++||.||+||++|.+|++.|||++|. +||.|.++
T Consensus 385 y~~~------~~~~~~~f~-----~--~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~-~~~~v~~~ 450 (542)
T PRK07786 385 YWNN------PEATAEAFA-----G--GWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLA-SHPDIVEV 450 (542)
T ss_pred hcCC------HHHHHHHhh-----C--CcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hCCCccEE
Confidence 5553 334444453 1 29999999999999999999999999999999999999999995 89999999
Q ss_pred EEEeecCCCCCceEEEEEEEecCCCC-CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 642 AAISVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 642 ~vv~~~~~~~~~~~l~a~vv~~~~~~-~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+|++.++...+ +.++++++..++.. ... +.+++.+++++++|++|..++++++||+|++||++|++|++++.+.
T Consensus 451 ~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~----~~l~~~l~~~l~~~~~P~~i~~v~~iP~t~~GKv~r~~L~~~~~~~ 525 (542)
T PRK07786 451 AVIGRADEKWG-EVPVAVAAVRNDDAALTL----EDLAEFLTDRLARYKHPKALEIVDALPRNPAGKVLKTELRERYGAC 525 (542)
T ss_pred EEEeccCcccC-ceEEEEEEECCCCCCCCH----HHHHHHHHhhccCCCCCCEEEEeccCCCCCcccccHHHHHHHHHhh
Confidence 99998887777 88999998876432 333 3455568888999999999999999999999999999999998766
Q ss_pred hc
Q 004860 721 LS 722 (727)
Q Consensus 721 ~~ 722 (727)
..
T Consensus 526 ~~ 527 (542)
T PRK07786 526 VN 527 (542)
T ss_pred hc
Confidence 44
No 75
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-63 Score=558.60 Aligned_cols=482 Identities=19% Similarity=0.187 Sum_probs=374.7
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
+|+++|+++|+++.+.+ .++||+||.++++++|+.|.++ +++||+|+|+++|++++++++|||+++|++++|+
T Consensus 6 ~a~~~p~~~a~~~~~~~------~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l 79 (501)
T PRK13390 6 HAQIAPDRPAVIVAETG------EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAI 79 (501)
T ss_pred hhhhCCCCcEEEecCCC------eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEecc
Confidence 35789999999875321 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
++.++++++.+++++++++++++++.... ......... ...+.+.. . .....++++.......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~-~~~~~~~~--~------~~~~~~~~~~~~~~~~-- 142 (501)
T PRK13390 80 NHHLTAPEADYIVGDSGARVLVASAALDG------LAAKVGADL-PLRLSFGG--E------IDGFGSFEAALAGAGP-- 142 (501)
T ss_pred ccCCCHHHHHHHHHhcCCcEEEEcchhhh------HHHHhhhcc-ceEEEecC--c------ccccccHHHHhcccCC--
Confidence 99999999999999999999999764310 001110000 00111110 0 0112233333221110
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEe--cChHHHHHH----HhhchhcCCCCCCEEEEecccccccchHHhHH
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPW--TQLSSIRCT----AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~--th~~l~~~~----~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (727)
. .....++++|+|||||||.||||++ +|.++.... ......+++..+|++++.+|++|+.++...+.
T Consensus 143 ------~-~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~ 215 (501)
T PRK13390 143 ------R-LTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSM 215 (501)
T ss_pred ------C-CCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHH
Confidence 0 0112357999999999999999995 555554321 11233567889999999999999988754555
Q ss_pred hhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhC
Q 004860 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (727)
Q Consensus 418 ~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~ 495 (727)
.+..|+++++.+ ..++..+++.|+++++|++.++|+++..|..... ....+++++|.+++||++++++..+.+.+.+
T Consensus 216 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~ 294 (501)
T PRK13390 216 VHALGGTVVLAK-RFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL 294 (501)
T ss_pred HHhcCceEEEcC-CcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhc
Confidence 677899998876 4578899999999999999999999999886532 2345678999999999999999888877655
Q ss_pred CCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCcccc
Q 004860 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLL 570 (727)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~ 570 (727)
+.++++.||+||++.++...........+++|+|+++ .++|+|+++++++.|+. |||++. .||++
T Consensus 295 -~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g-~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~------ 364 (501)
T PRK13390 295 -GPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSVLG-DLHICDDDGNELPAGRI--GTVYFERDRLPFRYLN------ 364 (501)
T ss_pred -CCceeeeecccccCceEEecchhhccCCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCCccccccC------
Confidence 5789999999999864433222222345689999999 79999999999999996 999983 34544
Q ss_pred ccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCC
Q 004860 571 NADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAG 650 (727)
Q Consensus 571 ~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~ 650 (727)
+++.++..|.. .+..||+|||+|++++||++++.||.|++||++|++|+|.|||++|. .||+|.+++|++.+++.
T Consensus 365 ~~~~t~~~~~~----~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~-~~~~v~~~~v~~~~~~~ 439 (501)
T PRK13390 365 DPEKTAAAQHP----AHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALT-MHPAVHDVAVIGVPDPE 439 (501)
T ss_pred ChhhhHHhhcc----CCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHH-hCCCeeEEEEEeccCcc
Confidence 33345444432 12249999999999999999999999999999999999999999996 89999999999999988
Q ss_pred CCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 651 GGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 651 ~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
.+ +.+++++++..+...+ +.+.+.+++.++++|+.|++|..++++++||+|++||++|++|+
T Consensus 440 ~~-e~~~~~v~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L~ 501 (501)
T PRK13390 440 MG-EQVKAVIQLVEGIRGS-DELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLLR 501 (501)
T ss_pred cC-ceeEEEEEecCCCCcc-hhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhcC
Confidence 77 8999999987654433 33445677788899999999999999999999999999999874
No 76
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=3.6e-63 Score=563.92 Aligned_cols=491 Identities=20% Similarity=0.221 Sum_probs=383.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++|+++|+++.+. ++||.||+++++++|++|.+ . +++||+|+++++|++++++++|||+++|++++|+
T Consensus 34 ~~~~p~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~v~~ 105 (562)
T PRK12492 34 CKKFADRPAFSNLGV--------TLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNT 105 (562)
T ss_pred HHhCCCCeeEecCCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEecc
Confidence 468999999987665 89999999999999999997 5 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEE---------------cC----CCCCCCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVL---------------PA----IGNDVGIP 324 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---------------~~----~~~~~~~~ 324 (727)
+|.++.+++.+++++++++++++++..... ...+........... .. ........
T Consensus 106 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (562)
T PRK12492 106 NPLYTAREMRHQFKDSGARALVYLNMFGKL------VQEVLPDTGIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPAY 179 (562)
T ss_pred CccCCHHHHHHHHhccCceEEEeccccchH------HHHhhhccCceEEEeechhhccccccchhccccccccccccccc
Confidence 999999999999999999999997643211 111111000000000 00 00000000
Q ss_pred CCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC---------CC
Q 004860 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID---------LK 395 (727)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~---------~~ 395 (727)
......+|++....... ..........+++++|+|||||||.||||+++|+++.+.+......+. +.
T Consensus 180 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 255 (562)
T PRK12492 180 HLPQAVPFKQALRQGRG----LSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMK 255 (562)
T ss_pred CCcccccHHHHHhccCC----CCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhccccccccccc
Confidence 01122456555433221 111123345689999999999999999999999998776654433332 23
Q ss_pred CC-CEEEEecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccce
Q 004860 396 VG-DVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI 473 (727)
Q Consensus 396 ~~-d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~L 473 (727)
.+ ++++...|+.|.++. +.++..+..|+++++.....++..+++.|+++++|++..+|+++..|.........+++++
T Consensus 256 ~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l 335 (562)
T PRK12492 256 EGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSAL 335 (562)
T ss_pred CCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccce
Confidence 33 467888999999887 4466678889888877655577889999999999999999999999988765556678899
Q ss_pred eEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCee
Q 004860 474 RSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCV 553 (727)
Q Consensus 474 r~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~gi 553 (727)
|.+++||+++++.+.+++.+.+ ++++++.||+||++.+++..........+++|+|+++++++|+|++++++|.|+.
T Consensus 336 r~~~~gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd~~~~~~~~g~~-- 412 (562)
T PRK12492 336 KLTNSGGTALVKATAERWEQLT-GCTIVEGYGLTETSPVASTNPYGELARLGTVGIPVPGTALKVIDDDGNELPLGER-- 412 (562)
T ss_pred eEEEeccccCCHHHHHHHHHHh-CCceeeccCccccCceeeecCCcccccCCccceecCCCEEEEECCCCCCCCCCCc--
Confidence 9999999999999988887654 6899999999999876554433333345789999999999999999999999986
Q ss_pred eeEEEe-----cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHH
Q 004860 554 GEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIE 628 (727)
Q Consensus 554 Gel~v~-----~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE 628 (727)
|||++. .||++. ++.++..|.. +.||+|||+|+++++|+++|.||.||+||++|++|+|.|||
T Consensus 413 Gel~v~g~~~~~gY~~~------~~~t~~~~~~------~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE 480 (562)
T PRK12492 413 GELCIKGPQVMKGYWQQ------PEATAEALDA------EGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIE 480 (562)
T ss_pred eEEEEeCCccccccccC------chhhhhcccC------CCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHH
Confidence 999983 455553 3355555542 23999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchh
Q 004860 629 RVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKL 708 (727)
Q Consensus 629 ~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKv 708 (727)
++|. .||.|.+++|++.++...+ +.+++++++.++ ..+.++ +++.++++|++|++|..++++++||+|++||+
T Consensus 481 ~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~-~~~~~~----i~~~~~~~l~~~~~P~~i~~~~~~P~t~~GK~ 553 (562)
T PRK12492 481 DVVM-AHPKVANCAAIGVPDERSG-EAVKLFVVARDP-GLSVEE----LKAYCKENFTGYKVPKHIVLRDSLPMTPVGKI 553 (562)
T ss_pred HHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCCC-CCCHHH----HHHHHHHhcccccCCcEEEEeccCCCCCCCce
Confidence 9996 8999999999999887777 889999887643 233344 44557788999999999999999999999999
Q ss_pred hHHHHHHH
Q 004860 709 LRRVLRDQ 716 (727)
Q Consensus 709 dR~~L~~~ 716 (727)
+|++|+++
T Consensus 554 ~r~~L~~~ 561 (562)
T PRK12492 554 LRRELRDI 561 (562)
T ss_pred eHHHHHhh
Confidence 99999875
No 77
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=4.5e-63 Score=558.43 Aligned_cols=488 Identities=18% Similarity=0.202 Sum_probs=386.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. .+.++.+||+||.++++++|+.|.++ +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 17 a~~~p~~~a~~~~~~---~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 17 ADVYGHKTALIFESS---GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred HHHCCCceEEEcccC---CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEEcC
Confidence 368999999998653 23446899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhC---CCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---PLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (727)
|+++.+++.+++++++++++++++... +.+..+.+.. ...+++..... .......++.+.......
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 162 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFY------PMYRQIQQEDATPLRHICLTRVAL-----PADDGVSSFTQLKAQQPA 162 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchh------HHHHHHHhhccccCcEEEEecCCC-----cccccccCHHHHhccCCc
Confidence 999999999999999999999987532 2222222221 11222222110 011123345544333221
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhh
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~ 420 (727)
.........++++++++|||||||.||||+++|++++...........+.+++++++..|+.|..+. ..++.++.
T Consensus 163 ----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 238 (517)
T PRK08008 163 ----TLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFS 238 (517)
T ss_pred ----cccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHHHHHHh
Confidence 0111223456899999999999999999999999987654433334467889999999998887654 56788999
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
.|+++++.+ ..++..+++.|+++++|++.++|++++.+............+++.+.+++ ++++....++.+.+ ++++
T Consensus 239 ~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~-~~~~ 315 (517)
T PRK08008 239 AGATFVLLE-KYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFYL-NLSDQEKDAFEERF-GVRL 315 (517)
T ss_pred cCcEEEEcc-ccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEec-CCCHHHHHHHHHHh-CCeE
Confidence 999999986 56788999999999999999999999998876543333456788877765 67777777776654 6899
Q ss_pred cccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEec--------ccCCCCcccccc
Q 004860 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFP--------LYLGASDRLLNA 572 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~--------~y~~~~~~~~~~ 572 (727)
++.||+||++..++...........++|+|+++++++|+|+++++++.|+. |||++.. ||++ ++
T Consensus 316 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~~~~~gy~~------~~ 387 (517)
T PRK08008 316 LTSYGMTETIVGIIGDRPGDKRRWPSIGRPGFCYEAEIRDDHNRPLPAGEI--GEICIKGVPGKTIFKEYYL------DP 387 (517)
T ss_pred EeeccccccccccccCCccccccCCccccCCCCcEEEEECCCCCCCCCCCc--ceEEEeCCCCcchhhhHhC------Ch
Confidence 999999999865554444344455689999999999999999999999986 9999842 4444 33
Q ss_pred ccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCC
Q 004860 573 DHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGG 652 (727)
Q Consensus 573 ~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~ 652 (727)
+.+++.|..+ .||+|||+|++++||+++++||.||+||++|++|+|.|||+++. .||.|.+++|++.++...+
T Consensus 388 ~~~~~~~~~~------g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~-~~~~v~~~~v~g~~~~~~~ 460 (517)
T PRK08008 388 KATAKVLEAD------GWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIA-THPKIQDIVVVGIKDSIRD 460 (517)
T ss_pred HHHhhcccCC------CCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHH-hCCceeeEEEEccCCCCCC
Confidence 4556666532 29999999999999999999999999999999999999999995 9999999999999988776
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
+.++++|+++++...+.+++++ +++++|++|++|..++++++||+|++||++|+.|+
T Consensus 461 -~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~P~~~~~v~~iP~t~~gK~~r~~l~ 517 (517)
T PRK08008 461 -EAIKAFVVLNEGETLSEEEFFA----FCEQNMAKFKVPSYLEIRKDLPRNCSGKIIKKNLK 517 (517)
T ss_pred -ceEEEEEEECCCCCCCHHHHHH----HHHhhcccccCCcEEEEeccCCCCCccceehhhcC
Confidence 8999999998765555555554 56778999999999999999999999999999874
No 78
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.3e-62 Score=557.27 Aligned_cols=493 Identities=20% Similarity=0.184 Sum_probs=387.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+.+.++ .+||.||+++++++|+.|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 13 a~~~p~~~a~~~~~~--------~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~l~ 84 (533)
T PRK07798 13 ADAVPDRVALVCGDR--------RLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVNVN 84 (533)
T ss_pred HHhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEecC
Confidence 478999999999766 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc--EEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
+.++.+++.+++++++++++++++... .....+....+.. .+.+..... .....+..+|.+++.....
T Consensus 85 ~~~~~~~l~~~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~- 154 (533)
T PRK07798 85 YRYVEDELRYLLDDSDAVALVYEREFA------PRVAEVLPRLPKLRTLVVVEDGSG---NDLLPGAVDYEDALAAGSP- 154 (533)
T ss_pred cCCCHHHHHHHHhhcCCCEEEEchhhH------HHHHHHhccCCCccEEEEecCCcc---cccCCccccHHHHHhccCC-
Confidence 999999999999999999999987432 1112222222222 222221111 1111134567776654322
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch---------hcCC------CCCCEEEEecccc
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---------HIDL------KVGDVYCWPTNLG 407 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~---------~~~~------~~~d~~l~~~~~~ 407 (727)
...... ...+.++++|||||||.||||+++|+++......... ...+ ..+++++..+|+.
T Consensus 155 ----~~~~~~-~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 229 (533)
T PRK07798 155 ----ERDFGE-RSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPLM 229 (533)
T ss_pred ----cCCCCC-CCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecchh
Confidence 011111 2234579999999999999999999998765443211 1112 5778999999999
Q ss_pred cccchHHhHHhhhcCcEEEEecC-CCChhhHHHHHHHhCCCEEEechHHHHH-HHhcCC-CCCCCccceeEEEeecCCCC
Q 004860 408 WVMGPVILFSSFLNGATLALYQG-SPLERSFGKFVQDAGVTVLGTVPSLVKA-WRNTNC-LEGLDWTKIRSFASTGETSN 484 (727)
Q Consensus 408 ~~~~~~~~~~~l~~G~~lv~~~~-~~~~~~l~~~i~~~~vt~l~~~P~~l~~-l~~~~~-~~~~~l~~Lr~i~~gGe~l~ 484 (727)
|+.+++.++.+|..|+++++.+. ..++..+++.|+++++|++.++|..+.. +..... ....+++++|.+++||++++
T Consensus 230 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~~ 309 (533)
T PRK07798 230 HGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALFS 309 (533)
T ss_pred hhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCCC
Confidence 99999999999999999999873 4578899999999999999999865533 333221 23456789999999999999
Q ss_pred hhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccc--cCCCCceEEEECCCCCcCCCCCCeeeeEEEec--
Q 004860 485 VDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS--TATMTAGLVILDECGVPYPDDQPCVGEVGLFP-- 560 (727)
Q Consensus 485 ~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG--~p~~~~~~~vld~~~~~~p~G~~giGel~v~~-- 560 (727)
+....++.+.++++.+++.||+||++.+......... ...| ++.++..++|+|+++++++.|+.+.|+++.++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~g~~~~~~~~~~~i~~~~~~~~~~g~~~~g~l~~~~~~ 386 (533)
T PRK07798 310 PSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKGA---VHTGGPRFTIGPRTVVLDEDGNPVEPGSGEIGWIARRGHI 386 (533)
T ss_pred HHHHHHHHHHcCCCeEEeeecccccccccccCCCCCC---ccCCCCccCCCceEEEECCCCCCCCCCCCCeeEEEeecCc
Confidence 9999999888778899999999999764443322111 2233 78899999999999999999987557776643
Q ss_pred --ccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCc
Q 004860 561 --LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESI 638 (727)
Q Consensus 561 --~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V 638 (727)
||++ ++..++..|.. ..|.+||+|||+|++++||+++++||.||+||++|++|+|.|||++|. ++|+|
T Consensus 387 ~~gy~~------~~~~t~~~f~~---~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v 456 (533)
T PRK07798 387 PLGYYK------DPEKTAETFPT---IDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALK-AHPDV 456 (533)
T ss_pred cccccC------ChhhhHHhhcc---CCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHH-hCccc
Confidence 3433 33455555543 346679999999999999999999999999999999999999999995 89999
Q ss_pred eeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHh
Q 004860 639 LETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 639 ~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~ 718 (727)
.+++|++.++...+ +.++++++++++...+.+++.+ .+++.|++|++|..++++++||+|++||++|+.|+++++
T Consensus 457 ~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~----~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~~~~~~~~~~ 531 (533)
T PRK07798 457 ADALVVGVPDERWG-QEVVAVVQLREGARPDLAELRA----HCRSSLAGYKVPRAIWFVDEVQRSPAGKADYRWAKEQAA 531 (533)
T ss_pred eeEEEEeccCcccC-ceEEEEEEECCCCCCCHHHHHH----HHhhhcccCCCCeEEEEcccCCCCCcchhhHHHHhhhhc
Confidence 99999999887777 8899999988766556555555 467788999999999999999999999999999999886
Q ss_pred h
Q 004860 719 H 719 (727)
Q Consensus 719 ~ 719 (727)
+
T Consensus 532 ~ 532 (533)
T PRK07798 532 E 532 (533)
T ss_pred c
Confidence 5
No 79
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-62 Score=555.64 Aligned_cols=474 Identities=20% Similarity=0.206 Sum_probs=372.0
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v-~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
.+|+++|+++.+. .+||+||.++++++|..|.+. + ++||+|+++++|++++++++|||+++|++++|++|
T Consensus 13 ~~p~~~Al~~~~~--------~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~v~l~p 84 (540)
T PRK13388 13 AGDDTIAVRYGDR--------TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVLVGLNT 84 (540)
T ss_pred ccCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEEEEecc
Confidence 3699999998766 999999999999999999999 9 89999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
.++.+++..++++++++++|+++..... ...+. .....++++. ...|.+++.....
T Consensus 85 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~------~~~~~-~~~~~~i~~~-------------~~~~~~~~~~~~~---- 140 (540)
T PRK13388 85 TRRGAALAADIRRADCQLLVTDAEHRPL------LDGLD-LPGVRVLDVD-------------TPAYAELVAAAGA---- 140 (540)
T ss_pred cCChHHHHHHHHhcCCCEEEEChhhhHH------HHhhc-ccCceEEEcc-------------chhhhhhhccccC----
Confidence 9999999999999999999998753211 11110 0011222221 0123333321111
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHh-HHhhhcCcE
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVIL-FSSFLNGAT 424 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~-~~~l~~G~~ 424 (727)
..+.....++++++++|||||||+||||+++|+++..........+++.++|++++.+|+.|..++... +.+|..|++
T Consensus 141 -~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~ 219 (540)
T PRK13388 141 -LTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAA 219 (540)
T ss_pred -cCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcE
Confidence 011123467999999999999999999999999998888877788899999999999999999888554 457999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+++.+ ..++..+++.|+++++|++..+|+.+..++..........++++.+ + |+.+++.....+.+.+ +++++|.|
T Consensus 220 ~v~~~-~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~~-~-G~~~~~~~~~~~~~~~-~~~l~~~Y 295 (540)
T PRK13388 220 VALPA-KFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRVA-F-GNEASPRDIAEFSRRF-GCQVEDGY 295 (540)
T ss_pred EEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEEE-E-CCCCCHHHHHHHHHHh-CCceeccc
Confidence 98865 4677899999999999999999999999886543222223466643 3 5556677777776665 57899999
Q ss_pred cccccccccccCCCCCCccccccccCCCCceEE-----------EECCCCCcCC-CCCCeeeeEEEe------cccCCCC
Q 004860 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLV-----------ILDECGVPYP-DDQPCVGEVGLF------PLYLGAS 566 (727)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~-----------vld~~~~~~p-~G~~giGel~v~------~~y~~~~ 566 (727)
|+||++.+++... ....+++|+|++|++++ ++|++|++++ .|. +|||++. .||++
T Consensus 296 G~tE~~~~~~~~~---~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g~~~~~~~~--~GEl~v~~g~~~~~gY~~-- 368 (540)
T PRK13388 296 GSSEGAVIVVREP---GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHGALLNADEA--IGELVNTAGAGFFEGYYN-- 368 (540)
T ss_pred ccccccceeecCC---CCCCCCCCCCCCCcEEEcCCCCccccceeccCccccccCCCc--ceEEEEecCCcccccccC--
Confidence 9999987554321 12356899999997653 4566666663 344 5999984 24443
Q ss_pred ccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEee
Q 004860 567 DRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISV 646 (727)
Q Consensus 567 ~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~ 646 (727)
+++.+++.|. .| ||+|||+|++++||+++++||+||+||++|++|+|.|||++|. .||+|.+|+|++.
T Consensus 369 ----~~~~t~~~~~-----~g--~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~v~g~ 436 (540)
T PRK13388 369 ----NPEATAERMR-----HG--MYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILL-RHPAINRVAVYAV 436 (540)
T ss_pred ----ChHHHHHHhh-----cC--ceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHH-hCCCceEEEEEEc
Confidence 3334555552 12 9999999999999999999999999999999999999999995 8999999999999
Q ss_pred cCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 647 SPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 647 ~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
+++..| +.+++++++.++...+.++++++++. +..|++|++|..++++++||+|++||++|++|+++..+.
T Consensus 437 ~~~~~g-~~~~~~v~~~~~~~~~~~~l~~~l~~--~~~l~~~~~P~~~~~v~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 437 PDERVG-DQVMAALVLRDGATFDPDAFAAFLAA--QPDLGTKAWPRYVRIAADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred cCCCCC-ceeEEEEEECCCCcCCHHHHHHHHHh--hccCCcccCCcEEEEeccCCCCCcceeeHHhHHHhccCC
Confidence 988777 78889998887766676777666532 246999999999999999999999999999999976544
No 80
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=8.3e-63 Score=554.71 Aligned_cols=479 Identities=18% Similarity=0.201 Sum_probs=395.6
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
..+|+++|+.+.+. ++||+||.++++++|..|.+. +++|++|+++++++.++++++|||+++|++++|+++
T Consensus 13 ~~~p~~~~~~~~~~--------~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~~~~ 84 (503)
T PRK04813 13 QTQPDFPAYDYLGE--------KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIPVDV 84 (503)
T ss_pred HhCCCceEEEeCCc--------EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEecCCC
Confidence 67899999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
.++.+++.++++.++++++++++...... ... ....++++...... ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~----------------~~~~~~~~~~~~~~--~~ 132 (503)
T PRK04813 85 SSPAERIEMIIEVAKPSLIIATEELPLEI--------------LGI----------------PVITLDELKDIFAT--GN 132 (503)
T ss_pred CChHHHHHHHHHhcCCCEEEecccccccc--------------cCC----------------cEEehHHhhhhhhc--cc
Confidence 99999999999999999999987531000 000 00111111111000 00
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEE
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~l 425 (727)
.........++++++++|||||||.||||.++|+++.....+....+++..+++++...|++|+.+.+.++.+|..|+++
T Consensus 133 ~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~ 212 (503)
T PRK04813 133 PYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTL 212 (503)
T ss_pred cccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhcCCEE
Confidence 01112234668899999999999999999999999998888877788899999999999999999988888999999999
Q ss_pred EEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccc
Q 004860 426 ALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIES 503 (727)
Q Consensus 426 v~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~ 503 (727)
++.+.. .++..+++.++++++|++..+|++++.+.........+++++|.++++|+++++.+.+++.+.++++.+++.
T Consensus 213 v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~ 292 (503)
T PRK04813 213 VALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSATIYNT 292 (503)
T ss_pred EEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCceEEeC
Confidence 998753 367889999999999999999999988766544455668899999999999999999999998888899999
Q ss_pred ccccccccccccCCC----CCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccc
Q 004860 504 CGGTELSSAYIQGSL----LQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADH 574 (727)
Q Consensus 504 YG~TE~~~~~~~~~~----~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~ 574 (727)
||+||++..++.... .......++|+|.++++++|+|+++.+++.|+. ||+++ ..||++.+ +.
T Consensus 293 yG~tE~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~------~~ 364 (503)
T PRK04813 293 YGPTEATVAVTSIEITDEMLDQYKRLPIGYAKPDSPLLIIDEEGTKLPDGEQ--GEIVISGPSVSKGYLNNP------EK 364 (503)
T ss_pred cccchheeEEEEEEecccccccCCCCcccccCCCCEEEEECCCCCCCCCCCc--eEEEEeccccccccCCCh------hH
Confidence 999999764433211 112334579999999999999999999999985 99998 35666533 34
Q ss_pred ccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCce
Q 004860 575 EEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPE 654 (727)
Q Consensus 575 ~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~ 654 (727)
+...|..+ .|.+||+|||+|++ +||++++.||.||+||++|.+|+|.+||+.+. .+|+|.+++|++.++...+ +
T Consensus 365 ~~~~~~~~---~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~ 438 (503)
T PRK04813 365 TAEAFFTF---DGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLR-QSSYVESAVVVPYNKDHKV-Q 438 (503)
T ss_pred hHHhhccC---CCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHH-hCCCcceEEEEEeeCCCCc-c
Confidence 44444321 45569999999999 99999999999999999999999999999995 8999999999997776655 8
Q ss_pred EEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 655 VLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 655 ~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
.+++++++.++......++.+.++++++++|++|++|..++++++||+|+|||++|++|++.+++
T Consensus 439 ~~~~~v~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 503 (503)
T PRK04813 439 YLIAYVVPKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALIEEVNK 503 (503)
T ss_pred EEEEEEEeccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHHHHhcC
Confidence 89999998765322335667778888999999999999999999999999999999999988753
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.7e-63 Score=612.43 Aligned_cols=497 Identities=19% Similarity=0.208 Sum_probs=393.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
++++||++|+++... +++||+||+++++++|+.|.+.+++||+|+++++|++++++++|||+++|++++|++|
T Consensus 625 a~~~p~~~a~~~~~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 625 AKRNWSRLAVADSTG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGALANLALLLAGKVPVNLNY 697 (1146)
T ss_pred HHhcCCCcEEEcCCC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHHHHHHHHHHcCCEEEEeCC
Confidence 478999999986432 2899999999999999999755999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC--CcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
.++.+++.+++++++++++++++........... ....+ ..++........ . .....+.+....... +
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~-~ 767 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLKNKGF----DLELPENVKVIYLEDLKAK----I-SKVDKLTALLAARLL-P 767 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCC----chhcccCceEEEeehhccc----c-chhHHHHHHHHhccC-C
Confidence 9999999999999999999998754321110000 00011 112222110000 0 001112222111100 0
Q ss_pred CC--CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHH-hHHhhh
Q 004860 344 RP--NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFL 420 (727)
Q Consensus 344 ~~--~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~ 420 (727)
.. .........++++++++|||||||.||||+++|+++.+.+......++++++|++++.+|+.|..++.. ++.+++
T Consensus 768 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~ 847 (1146)
T PRK08633 768 ARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGLTVTLWLPLL 847 (1146)
T ss_pred HHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhHHHHHHHHHH
Confidence 00 000012346799999999999999999999999999998888778888999999999999999998854 789999
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
.|+++++.+...++..+++.++++++|++.++|++++.+.+.....+.+++++|.+++|||++++++.+++.+.+ ++++
T Consensus 848 ~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~-g~~~ 926 (1146)
T PRK08633 848 EGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAFEEKF-GIRI 926 (1146)
T ss_pred CCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHHHHHh-CCCe
Confidence 999999987667888999999999999999999999999886555666789999999999999999998888776 6899
Q ss_pred cccccccccccccccCCCCC---------CccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCC
Q 004860 501 IESCGGTELSSAYIQGSLLQ---------PQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGA 565 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~---------~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~ 565 (727)
+|.||+||++..++...+.. ....+++|+|+||++++|+| ++++++|.|+. |||++ ..||+++
T Consensus 927 ~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g~~--Gel~v~g~~~~~gY~~~ 1004 (1146)
T PRK08633 927 LEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPGED--GLILIGGPQVMKGYLGD 1004 (1146)
T ss_pred ecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCCCc--eEEEEcCCCccccccCC
Confidence 99999999986554332211 12457899999999999999 56899999996 99998 3566654
Q ss_pred CccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCC--CceeeEE
Q 004860 566 SDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADE--SILETAA 643 (727)
Q Consensus 566 ~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p--~V~~a~v 643 (727)
++.+++.|.+. +|.+||+|||+|++|+||+++++||.||+||++|++|+|.|||++|. +|| .+.+++|
T Consensus 1005 ------~~~t~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~-~~~~~~~~~~~v 1074 (1146)
T PRK08633 1005 ------PEKTAEVIKDI---DGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELA-KALGGEEVVFAV 1074 (1146)
T ss_pred ------ccchHHHhhcC---CCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHH-hccCCCCceEEE
Confidence 33555566532 35579999999999999999999999999999999999999999995 898 5677999
Q ss_pred EeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHH-hhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 644 ISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQ-SKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 644 v~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~-~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
++.+++..| ++++++++.. ..+.++++++ ++ +.+|+|++|..+++++++|+|+|||+||++|+++..+.
T Consensus 1075 ~~~~~~~~g-~~~~~~v~~~---~~~~~~l~~~----~~~~~l~~~~~P~~i~~~~~iP~t~~GKi~r~~L~~~~~~~ 1144 (1146)
T PRK08633 1075 TAVPDEKKG-EKLVVLHTCG---AEDVEELKRA----IKESGLPNLWKPSRYFKVEALPLLGSGKLDLKGLKELALAL 1144 (1146)
T ss_pred EeccCCCCC-cEEEEEEecC---ccCHHHHHHH----HHhcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHh
Confidence 999998888 8999998862 2344555544 44 47999999999999999999999999999999986654
No 82
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.1e-62 Score=551.50 Aligned_cols=496 Identities=23% Similarity=0.291 Sum_probs=399.6
Q ss_pred ccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHH
Q 004860 173 LNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYL 251 (727)
Q Consensus 173 ~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~l 251 (727)
.|.+++.+..+. ++.+||++|++..+. .+||.||+++++++|++|.+. +++|++|+++++|+++++++++
T Consensus 3 ~~~~~~~~~~~~-~~~~p~~~a~~~~~~--------~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~ 73 (508)
T TIGR02262 3 YNAAEDLLDRNV-VEGRGGKTAFIDDIS--------SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFL 73 (508)
T ss_pred chHHHHHHHHHH-hcccCCceEEEeCCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 467777777553 467999999998766 899999999999999999999 9999999999999999999999
Q ss_pred HHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc--EEEEcCCCCCCCCCCCcCc
Q 004860 252 AIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK--AIVLPAIGNDVGIPLREQD 329 (727)
Q Consensus 252 A~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~ 329 (727)
||+++|++++|++|.++.+++.++++.++++++++++... +.........+.. .+.+... ....
T Consensus 74 a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 139 (508)
T TIGR02262 74 GAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELL------PVIKAALGKSPHLEHRVVVGRP--------EAGE 139 (508)
T ss_pred HHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhH------HHHHHHHhcCCCccEEEEeCCC--------Cccc
Confidence 9999999999999999999999999999999999987532 1122222222221 2222110 0112
Q ss_pred ccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHh-hchhcCCCCCCEEEEeccccc
Q 004860 330 LSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE-GWAHIDLKVGDVYCWPTNLGW 408 (727)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~~d~~l~~~~~~~ 408 (727)
..+.+....... ........++++++++|||||||.||||+++|+++...+.. ....++++++|++++..|+.|
T Consensus 140 ~~~~~~~~~~~~-----~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~ 214 (508)
T TIGR02262 140 VQLAELLATESE-----QFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFF 214 (508)
T ss_pred ccHHHHhhcCCC-----ccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHH
Confidence 334444332211 11222345789999999999999999999999999876654 345678999999999999999
Q ss_pred ccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhh
Q 004860 409 VMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDD 487 (727)
Q Consensus 409 ~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~ 487 (727)
+.++ ..++.++..|+++++.++..++..+++.|+++++|++.++|+++..++...........++|.+++||+++++++
T Consensus 215 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~ 294 (508)
T TIGR02262 215 AYGLGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEV 294 (508)
T ss_pred HHHHHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHH
Confidence 9888 456788999999999887678889999999999999999999998887654333345678999999999999999
Q ss_pred HHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----ccc
Q 004860 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLY 562 (727)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y 562 (727)
.+.+.+.+ ++++++.||+||++.+...+.. .....+++|+|++|+.++|+|++++++|.|+. |||++. .+|
T Consensus 295 ~~~~~~~~-~~~v~~~YG~tE~~~~~~~~~~-~~~~~~~~G~~~~g~~v~i~d~~~~~~~~g~~--Gel~i~~~~~~~gY 370 (508)
T TIGR02262 295 GQRWQARF-GVDIVDGIGSTEMLHIFLSNLP-GDVRYGTSGKPVPGYRLRLVGDGGQDVAAGEP--GELLISGPSSATMY 370 (508)
T ss_pred HHHHHHHh-CCchhhCccccccCceeecCCc-cCCCCCCcCCCCCCcEEEEECCCCCCCCCCCe--eEEEEecCcccccc
Confidence 88888776 5789999999999865443322 22345689999999999999999999999985 999983 444
Q ss_pred CCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeE
Q 004860 563 LGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETA 642 (727)
Q Consensus 563 ~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~ 642 (727)
++ +++.++..|. .+||+|||++++++||.++++||.||+||++|.+|+|.+||++|. .+|+|.+++
T Consensus 371 ~~------~~~~~~~~~~-------~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~-~~~~v~~~~ 436 (508)
T TIGR02262 371 WN------NRAKTRDTFQ-------GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALI-QHPAVLEAA 436 (508)
T ss_pred CC------CHHHhHhhhh-------cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHH-hCCCeeEEE
Confidence 44 3334444442 139999999999999999999999999999999999999999996 899999999
Q ss_pred EEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHH
Q 004860 643 AISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 643 vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 716 (727)
+++.++...+ +++++|+++.++...+ +.+.+.+++.++++|++|++|..++.++++|+|++||++|+.|+++
T Consensus 437 ~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~gKi~r~~l~~~ 508 (508)
T TIGR02262 437 VVGVEDEDGL-IKPKAFIVLRPGQDID-TALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATGKIQRFKLREG 508 (508)
T ss_pred EEeccccCCC-ceeEEEEEeCCCCccc-cccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCCcEehhhccCC
Confidence 9998877666 8899999987654332 3445667778899999999999999999999999999999998753
No 83
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-62 Score=550.45 Aligned_cols=472 Identities=21% Similarity=0.227 Sum_probs=377.1
Q ss_pred CCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC
Q 004860 189 EDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (727)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~ 266 (727)
.+|++|+++.+. ++||+||.++++++|++|.++ ++++++|+++++|++++++++|||+++|++++|++|.
T Consensus 16 ~~~~~a~~~~~~--------~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~ 87 (529)
T PRK07867 16 EDDDRGLYFEDS--------FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIVPVGLNPT 87 (529)
T ss_pred ccCCceEEECCc--------EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEecCC
Confidence 378999998776 999999999999999999996 8899999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCC
Q 004860 267 FAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPN 346 (727)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (727)
++.+++.+++++++++++++++.... ....+ .....++... ...|.+.+..... .
T Consensus 88 ~~~~~l~~~l~~~~~~~li~~~~~~~------~~~~~----~~~~~~~~~~-----------~~~~~~~l~~~~~----~ 142 (529)
T PRK07867 88 RRGAALARDIAHADCQLVLTESAHAE------LLDGL----DPGVRVINVD-----------SPAWADELAAHRD----A 142 (529)
T ss_pred CChHHHHHHHHhCCCeEEEECHhHHH------HHHhh----ccCceEEEec-----------cccHHHHhcccCC----C
Confidence 99999999999999999999875431 11111 1111122110 1124444432211 0
Q ss_pred CCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHH-hHHhhhcCcEE
Q 004860 347 YYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATL 425 (727)
Q Consensus 347 ~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~l 425 (727)
........++++++++|||||||.||||+++|+++..........++++++|++++.+|++|..+++. ++.++..|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 143 EPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred CCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 11122346789999999999999999999999999888887778889999999999999999988844 66789999999
Q ss_pred EEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccc
Q 004860 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (727)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (727)
++.+ ..++..+++.++++++|++.++|+.+..++..........+++|. ++||+.+++.. .++.+.+ ++++++.||
T Consensus 223 ~~~~-~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr~-~~gg~~~~~~~-~~~~~~~-g~~l~~~YG 298 (529)
T PRK07867 223 ALRR-KFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLRI-VYGNEGAPGDI-ARFARRF-GCVVVDGFG 298 (529)
T ss_pred EecC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceEE-EecCCCChHHH-HHHHHHh-CCcEEEeec
Confidence 8875 467889999999999999999999999988754332233457884 56888887664 4455555 688999999
Q ss_pred ccccccccccCCCCCCccccccccCCCCceEEEEC-CCCCcCCCCC----------CeeeeEEE------ecccCCCCcc
Q 004860 506 GTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQ----------PCVGEVGL------FPLYLGASDR 568 (727)
Q Consensus 506 ~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~----------~giGel~v------~~~y~~~~~~ 568 (727)
+||+++...... ....+++|.|+++ ++|+| +++++++.|+ ..+||+++ ..||++.
T Consensus 299 ~TE~~~~~~~~~---~~~~~~~g~~~~~--~~i~~~~~~~~~~~g~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~--- 370 (529)
T PRK07867 299 STEGGVAITRTP---DTPPGALGPLPPG--VAIVDPDTGTECPPAEDADGRLLNADEAIGELVNTAGPGGFEGYYND--- 370 (529)
T ss_pred ccccccccccCC---CCCCCCcCCCCCC--EEEEECCCCCCCCCCccccccccccCCcceEEEEecCCcccccccCC---
Confidence 999986543221 1234678999998 77887 5788898887 01399987 2455543
Q ss_pred ccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecC
Q 004860 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (727)
Q Consensus 569 ~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~ 648 (727)
++.+...|. .| ||+|||+|+++++|+++|+||.||+||++|++|+|.|||++|. .||+|.+++|++.++
T Consensus 371 ---~~~~~~~~~-----~g--~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~-~~p~V~~~~V~g~~~ 439 (529)
T PRK07867 371 ---PEADAERMR-----GG--VYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILL-RYPDATEVAVYAVPD 439 (529)
T ss_pred ---hHhhhhhhc-----CC--eEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHH-hCCCeeEEEEEeccC
Confidence 334444442 12 9999999999999999999999999999999999999999996 899999999999999
Q ss_pred CCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 649 ~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
+..+ +++++++++.++...+.+++++++++ +..|++|++|..|+++++||+|++||++|+.|+++...
T Consensus 440 ~~~g-~~~~a~vv~~~~~~~~~~~l~~~~~~--~~~l~~~~~P~~i~~~~~iP~t~~GKv~r~~L~~~~~~ 507 (529)
T PRK07867 440 PVVG-DQVMAALVLAPGAKFDPDAFAEFLAA--QPDLGPKQWPSYVRVCAELPRTATFKVLKRQLSAEGVD 507 (529)
T ss_pred CCCC-eeEEEEEEECCCCCCCHHHHHHHHHh--hccCCcccCCeEEEEeeccCCCCCcceeHHHHHHhcCC
Confidence 8888 89999999988766777777776543 24599999999999999999999999999999998754
No 84
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-62 Score=545.64 Aligned_cols=452 Identities=20% Similarity=0.197 Sum_probs=371.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
.++.++++|+++.++ ++||+||.++++++|..|. ++|+|+++++|++++++++|||+++|++++|++|
T Consensus 10 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~~a~~L~----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~ 77 (471)
T PRK07787 10 AAAADIADAVRIGGR--------VLSRSDLAGAATAVAERVA----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPP 77 (471)
T ss_pred hcccCCceEEEeCCc--------EEEHHHHHHHHHHHHHHhc----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCC
Confidence 357789999999877 9999999999999999986 5799999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
.++.+++.++++++++++++++.... . ...+...+.. ...+|.
T Consensus 78 ~~~~~~l~~~l~~~~~~~il~~~~~~--~----------~~~~~~~~~~-------------~~~~~~------------ 120 (471)
T PRK07787 78 DSGVAERRHILADSGAQAWLGPAPDD--P----------AGLPHVPVRL-------------HARSWH------------ 120 (471)
T ss_pred CCChHHHHHHHHhcCCCEEEecCCcc--c----------ccccceeeec-------------cccccc------------
Confidence 99999999999999999999976310 0 0000000000 000000
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcE
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGAT 424 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~ 424 (727)
......++++++++|||||||.||||+++|+++...+......+++.++|++++.+|+.|..++ ..++.++..|++
T Consensus 121 ---~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~ 197 (471)
T PRK07787 121 ---RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNR 197 (471)
T ss_pred ---cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCE
Confidence 0112356899999999999999999999999999988877778889999999999999999887 458899999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+++.+ ..++..+++.|+ +++|++.++|+++..|.+... ....++++|.+++||+++++...+++.+.+ +.++++.|
T Consensus 198 ~~~~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~-~~~~~~~Y 273 (471)
T PRK07787 198 FVHTG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-AARALRGARLLVSGSAALPVPVFDRLAALT-GHRPVERY 273 (471)
T ss_pred EEecC-CCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-ccccccceeEEEECCCCCCHHHHHHHHHHc-CCCeeccc
Confidence 98875 467889999999 999999999999999987532 234578999999999999999988887765 57899999
Q ss_pred cccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCC-CCCCeeeeEEEe-----cccCCCCcccccccccccc
Q 004860 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYP-DDQPCVGEVGLF-----PLYLGASDRLLNADHEEVY 578 (727)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p-~G~~giGel~v~-----~~y~~~~~~~~~~~~~~~~ 578 (727)
|+||++...+.. .......+++|+|++++.++|+|+++++++ .|+. +|||++. .||++. ++.++..
T Consensus 274 G~tE~~~~~~~~-~~~~~~~~~vG~~~~g~~~~i~d~~~~~~~~~~~~-~Gei~v~g~~~~~gy~~~------~~~t~~~ 345 (471)
T PRK07787 274 GMTETLITLSTR-ADGERRPGWVGLPLAGVETRLVDEDGGPVPHDGET-VGELQVRGPTLFDGYLNR------PDATAAA 345 (471)
T ss_pred CccccCcceecC-CCCcccCCcccccCCCcEEEEECCCCCCCCCCCCC-ceEEEEECcccchhhcCC------hhhchhc
Confidence 999998643322 222334568999999999999999999997 3431 5999983 455543 3355556
Q ss_pred ccccccCCCceeeeeCceEEEecCceEEEEeec-CCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 579 FRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRA-DDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 579 f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~-dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
|..+ .||+|||+|++++||+++++||. |++||++|++|+|.|||++|. .+|.|.+++|++.++...+ +.++
T Consensus 346 ~~~~------~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~ 417 (471)
T PRK07787 346 FTAD------GWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALL-GHPGVREAAVVGVPDDDLG-QRIV 417 (471)
T ss_pred ccCC------CceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHH-hCCCcceEEEEcccccccC-eEEE
Confidence 6432 29999999999999999999996 899999999999999999995 8999999999999887777 8999
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHH
Q 004860 658 IFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 715 (727)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 715 (727)
+||+... ..+.++ +.+.+++.|++|++|..++++++||+|+|||++|+.|++
T Consensus 418 a~v~~~~--~~~~~~----l~~~l~~~l~~~~~P~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 418 AYVVGAD--DVAADE----LIDFVAQQLSVHKRPREVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred EEEEeCC--CCCHHH----HHHHHHhhcccccCCcEEEEeccCCCCCCccccHHHhcc
Confidence 9999843 234444 445577889999999999999999999999999999975
No 85
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-62 Score=549.69 Aligned_cols=485 Identities=17% Similarity=0.181 Sum_probs=389.8
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+++|+++|+++.+. .+||+||.++++++|+.|.+. +++|++|++++++++++++++|||+++|++++|++|
T Consensus 23 ~~~~~~~a~~~~~~--------~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~ 94 (524)
T PRK06188 23 KRYPDRPALVLGDT--------RLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAGLRRTALHP 94 (524)
T ss_pred HHCCCCeEEEECCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCCEEEeccc
Confidence 68999999998776 999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRP 345 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (727)
..+.+++..++++++++.+++++... ...........+....++...... ...+..+.......
T Consensus 95 ~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~---- 158 (524)
T PRK06188 95 LGSLDDHAYVLEDAGISTLIVDPAPF-----VERALALLARVPSLKHVLTLGPVP-------DGVDLLAAAAKFGP---- 158 (524)
T ss_pred CCCHHHHHHHHHhcCceEEEEecchh-----hHHHHHHhhhcCCceEEEEeCCcc-------chhhHHHhhhccCc----
Confidence 99999999999999999999987421 011111111111111111111000 00011111111000
Q ss_pred CCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEE
Q 004860 346 NYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATL 425 (727)
Q Consensus 346 ~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~l 425 (727)
.... ....++++++++|||||||.||+|+++|+++.+.+......+++..+|++++..|++|..++. ++.+++.|+++
T Consensus 159 ~~~~-~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~~~~l~~G~~~ 236 (524)
T PRK06188 159 APLV-AAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-FLPTLLRGGTV 236 (524)
T ss_pred cccc-ccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-HHHHHHcCCEE
Confidence 0111 122346699999999999999999999999999888888889999999999999999987764 67889999999
Q ss_pred EEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccc
Q 004860 426 ALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (727)
Q Consensus 426 v~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (727)
++.+ ..++..+++.|+++++|++.++|+++..|++.......+++++|.+++||++++++....+.+.+ ++.+++.||
T Consensus 237 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~-~~~~~~~YG 314 (524)
T PRK06188 237 IVLA-KFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERF-GPIFAQYYG 314 (524)
T ss_pred EEcC-CCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHh-CchhhheeC
Confidence 9987 46788999999999999999999999999987666667789999999999999999877776665 467999999
Q ss_pred ccccccccccCCCC-----CCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCccccccccc
Q 004860 506 GTELSSAYIQGSLL-----QPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHE 575 (727)
Q Consensus 506 ~TE~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~ 575 (727)
+||++.+++..... ......++|+|++++.++|+|+++++++.|+. ||+++. .||++.+ ..+
T Consensus 315 ~tE~~~~~~~~~~~~~~~~~~~~~~~~G~p~~g~~v~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~~~------~~~ 386 (524)
T PRK06188 315 QTEAPMVITYLRKRDHDPDDPKRLTSCGRPTPGLRVALLDEDGREVAQGEV--GEICVRGPLVMDGYWNRP------EET 386 (524)
T ss_pred ccccCCceeecCchhccccccccCCccccccCCcEEEEEcCCCCCCCCCCe--eEEEEECcchhhhhcCCh------HHh
Confidence 99997554433221 22345689999999999999999999999986 999993 4555432 233
Q ss_pred cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceE
Q 004860 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (727)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~ 655 (727)
...|. . .||+|||+|++++||+++++||.|++||++|.+|+|.+||++|. .||+|.+++|++.+++..+ +.
T Consensus 387 ~~~~~-----~--g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~ 457 (524)
T PRK06188 387 AEAFR-----D--GWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLA-EHPAVAQVAVIGVPDEKWG-EA 457 (524)
T ss_pred hhhhc-----C--CceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCcC-ce
Confidence 33332 1 29999999999999999999999999999999999999999995 9999999999999888777 89
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhh
Q 004860 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
++++++++++...+.++ +++.+++.+++|++|..|+++++||+|++||++|++|++++.+.
T Consensus 458 ~~~~v~~~~~~~~~~~~----l~~~~~~~l~~~~~p~~i~~v~~~P~t~~gKi~r~~L~~~~~~~ 518 (524)
T PRK06188 458 VTAVVVLRPGAAVDAAE----LQAHVKERKGSVHAPKQVDFVDSLPLTALGKPDKKALRARYWEG 518 (524)
T ss_pred EEEEEEECCCCCCCHHH----HHHHHHHhcccCCCCcEEEEecCCCCCccccccHHHHHHHHHhh
Confidence 99999988755445444 44557788999999999999999999999999999999998443
No 86
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.1e-62 Score=555.75 Aligned_cols=491 Identities=20% Similarity=0.242 Sum_probs=383.7
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHH-hh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALD-TM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~-~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++|+++|+++.++ ++||+||.++++++|+.|. +. +++||+|+++++|++++++++|||+++|++++|+
T Consensus 35 ~~~~~~~~a~~~~~~--------~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l 106 (560)
T PRK08751 35 VAKFADRPAYHSFGK--------TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNV 106 (560)
T ss_pred HHhCCCCceEEECCc--------eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEecc
Confidence 368899999998766 9999999999999999997 57 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCC-------------------CCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGND-------------------VGIP 324 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------------------~~~~ 324 (727)
+|.++.+++.+++++++++++++++... ..........+...++....... ....
T Consensus 107 ~p~~~~~~~~~~l~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (560)
T PRK08751 107 NPLYTPRELKHQLIDSGASVLVVIDNFG------TTVQQVIADTPVKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPEY 180 (560)
T ss_pred CccCCHHHHHHHHHhcCCeEEEEcchhH------HHHHHHhhCCCccEEEEechhhhcccccchhhhhhhhhhhcccccc
Confidence 9999999999999999999999987532 11111111122111111100000 0000
Q ss_pred CCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC----CCCC-CE
Q 004860 325 LREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID----LKVG-DV 399 (727)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~----~~~~-d~ 399 (727)
..+....|.+....... .........++++++++|||||||.||||+++|+++...+.+....++ +.++ ++
T Consensus 181 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (560)
T PRK08751 181 RINGAIRFREALALGRK----HSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEV 256 (560)
T ss_pred CCCccccHHHHHhccCC----CCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCce
Confidence 00122334444332211 111223346789999999999999999999999999887766544443 3444 46
Q ss_pred EEEecccccccchH-HhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEe
Q 004860 400 YCWPTNLGWVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (727)
Q Consensus 400 ~l~~~~~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~ 478 (727)
+++..++.|.+++. ..+.++..|+++++.....++..+++.|+++++|++..+|+++..+.+.......++++||.+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~ 336 (560)
T PRK08751 257 VITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLG 336 (560)
T ss_pred EEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeee
Confidence 67778888887763 45677888998888766667889999999999999999999999998876555667889999999
Q ss_pred ecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE
Q 004860 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (727)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (727)
||+++++.+...+.+.+ ++++++.||+||++..++..........+++|+|++++.++|+|+++++++.|+. |||++
T Consensus 337 gG~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~~g~~--Gel~v 413 (560)
T PRK08751 337 GGMAVQRSVAERWKQVT-GLTLVEAYGLTETSPAACINPLTLKEYNGSIGLPIPSTDACIKDDAGTVLAIGEI--GELCI 413 (560)
T ss_pred CCCCCCHHHHHHHHHHh-CCeEEEeeccccCCCceecccccccccCCCcCccCCCceEEEECCCCCCCCCCCc--eEEEE
Confidence 99999999888887755 6789999999999875544333223445689999999999999999999999985 99998
Q ss_pred -----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 559 -----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
..||++ +++.++.+|.. ..||+|||+|+++++|+++++||.||+||++|++|+|.|||++|.
T Consensus 414 ~~~~~~~gy~~------~~~~~~~~~~~------~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~- 480 (560)
T PRK08751 414 KGPQVMKGYWK------RPEETAKVMDA------DGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA- 480 (560)
T ss_pred ecCccchhhcC------Chhhhhhcccc------CCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHH-
Confidence 345554 33455555542 239999999999999999999999999999999999999999995
Q ss_pred cCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHH
Q 004860 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVL 713 (727)
Q Consensus 634 ~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L 713 (727)
.||+|.+++|++.++...+ +.++++++.+. ...+.++++ +.++++|++|++|..++++++||+|++||++|++|
T Consensus 481 ~~~~v~~~~v~~~~~~~~g-e~~~~~v~~~~-~~~~~~~l~----~~~~~~l~~~~~P~~v~~v~~lP~t~~gKv~r~~L 554 (560)
T PRK08751 481 MMPGVLEVAAVGVPDEKSG-EIVKVVIVKKD-PALTAEDVK----AHARANLTGYKQPRIIEFRKELPKTNVGKILRREL 554 (560)
T ss_pred hCcCeeeeEEEecCCCCCC-ceEEEEEEcCC-CCCCHHHHH----HHHHHhhhhccCCeEEEEhhhCCCCccccccHHHH
Confidence 8999999999999988777 77888777543 334444444 45777899999999999999999999999999999
Q ss_pred HHH
Q 004860 714 RDQ 716 (727)
Q Consensus 714 ~~~ 716 (727)
++.
T Consensus 555 ~~~ 557 (560)
T PRK08751 555 RDA 557 (560)
T ss_pred HHh
Confidence 876
No 87
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2.5e-62 Score=539.41 Aligned_cols=429 Identities=15% Similarity=0.124 Sum_probs=345.6
Q ss_pred eecHHHHHHHHHHHHHHHHhh-c-CCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEe
Q 004860 209 LMTYKELREQVMLVANALDTM-F-SKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFT 286 (727)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v-~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~ 286 (727)
-+.|+||+++++++|++|++. + ++|++|+++++|+++++++++||+++|++++|++|.++.+++.+++++++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 478999999999999999999 6 67999999999999999999999999999999999999999999999999999998
Q ss_pred ecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCC
Q 004860 287 QDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSG 366 (727)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSG 366 (727)
++..... . . .. ... ......++++++++||||
T Consensus 99 ~~~~~~~-------------~------~-------------~~---------~~~-------~~~~~~~~~~~~i~~TSG 130 (452)
T PRK07445 99 LDQLKLS-------------H------P-------------PP---------LPS-------QGILPNLETGWIMIPTGG 130 (452)
T ss_pred cCccccc-------------c------C-------------CC---------CCc-------cccCCCCCCcEEEEeCCC
Confidence 7642100 0 0 00 000 001124689999999999
Q ss_pred CCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCC
Q 004860 367 TTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGV 446 (727)
Q Consensus 367 STG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~v 446 (727)
|||.||||++||+++++.+.+....+++.+ +++++.+|++|.+++..++.+|+.|+++++.+.. ..........++++
T Consensus 131 TTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~-~~~~~~~~~~~~~~ 208 (452)
T PRK07445 131 SSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYK-RLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChH-hccchhhhhhhcCc
Confidence 999999999999999888877766677765 4678889999999998888999999999998632 11222344457899
Q ss_pred CEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCC-Ccccc
Q 004860 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ-PQAFG 525 (727)
Q Consensus 447 t~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~-~~~~~ 525 (727)
|++.++|++++.+.+.. ..++++||.+++||++++++..+.+... +++++|.||+||++..++...+.. .....
T Consensus 209 t~~~~vP~~l~~l~~~~---~~~l~~l~~i~~gG~~l~~~~~~~~~~~--~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~ 283 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR---PQWLAQFRTILLGGAPAWPSLLEQARQL--QLRLAPTYGMTETASQIATLKPDDFLAGNN 283 (452)
T ss_pred eEEEehHHHHHHHHhhC---hhhhhcceEEEECCccCCHHHHHHHHhc--CCeEecCcchhhhcccccccCchhhccCCC
Confidence 99999999999998632 3357899999999999999887776542 678999999999986544332221 12346
Q ss_pred ccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCce
Q 004860 526 AFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGY 604 (727)
Q Consensus 526 ~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~ 604 (727)
++|+|+++++++|+ .|+ +|||+|. +..+.+ |++ ++. ...+||+|||+|++|+||+
T Consensus 284 ~~G~~~p~~~v~i~--------~g~--~Gel~v~g~~~~~g---Y~~----------~~~-~~~g~~~TGDl~~~d~dG~ 339 (452)
T PRK07445 284 SSGQVLPHAQITIP--------ANQ--TGNITIQAQSLALG---YYP----------QIL-DSQGIFETDDLGYLDAQGY 339 (452)
T ss_pred cCCccCCCCeEEEc--------CCC--cceEEEeCCccchh---hcC----------Ccc-CCCCEEECCCEEEEcCCCC
Confidence 79999999999998 344 3999983 222111 111 111 1234999999999999999
Q ss_pred EEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhh
Q 004860 605 IIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK 684 (727)
Q Consensus 605 l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~ 684 (727)
++|.||.||+||++|+||+|.|||++|. +||+|.+|+|++.+++..| +.++++++.+++ ..+.+++ +++++++
T Consensus 340 l~~~GR~dd~I~~~G~~V~p~eIE~~l~-~~p~V~~a~V~g~~~~~~g-~~~~a~vv~~~~-~~~~~~l----~~~~~~~ 412 (452)
T PRK07445 340 LHILGRNSQKIITGGENVYPAEVEAAIL-ATGLVQDVCVLGLPDPHWG-EVVTAIYVPKDP-SISLEEL----KTAIKDQ 412 (452)
T ss_pred EEEEeecCCEEEECCEEECHHHHHHHHH-hCCCcceEEEEeccCcCCC-cEEEEEEEeCCC-CCCHHHH----HHHHHHh
Confidence 9999999999999999999999999996 9999999999999998888 899999998765 2344444 4457788
Q ss_pred cCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhcc
Q 004860 685 LNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 685 L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
|++|++|..++++++||+|++||++|+.|++++.++++.
T Consensus 413 L~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~ 451 (452)
T PRK07445 413 LSPFKQPKHWIPVPQLPRNPQGKINRQQLQQIAVQRLGL 451 (452)
T ss_pred CCcccCCeEEEEecCCCCCCCcccCHHHHHHHHHHhhCC
Confidence 999999999999999999999999999999999888764
No 88
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-62 Score=554.60 Aligned_cols=491 Identities=23% Similarity=0.252 Sum_probs=383.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.++ .+||+||+++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 33 a~~~p~~~a~~~~~~--------~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~v~ 104 (557)
T PRK07059 33 FRQYADRPAFICMGK--------AITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGYVVVNVN 104 (557)
T ss_pred HHHcCCCceEEEcCc--------eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCeEEeccC
Confidence 368999999998776 999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCc-EEEEcCCCCC-----------------CCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLK-AIVLPAIGND-----------------VGIPLR 326 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~-----------------~~~~~~ 326 (727)
|.++.+++.+++++++++++++++.+. +....+....... +++....... ......
T Consensus 105 ~~~~~~~~~~~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (557)
T PRK07059 105 PLYTPRELEHQLKDSGAEAIVVLENFA------TTVQQVLAKTAVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVPAWSL 178 (557)
T ss_pred cccCHHHHHHHHHccCceEEEEchhhH------HHHHHhhcccCCceeEEecccccccccccccccccccccccccccCC
Confidence 999999999999999999999987532 1111111111111 1111100000 000001
Q ss_pred cCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchh----cCCC---CCCE
Q 004860 327 EQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH----IDLK---VGDV 399 (727)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~----~~~~---~~d~ 399 (727)
++...+.+.+..... .........++++++|+|||||||.||||+++|++++.++...... +... ....
T Consensus 179 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 179 PGHVRFNDALAEGAR----QTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred CCcccHHHHhhccCC----CCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 223445554433221 1112234567899999999999999999999999987655432211 1111 2346
Q ss_pred EEEecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEe
Q 004860 400 YCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAS 478 (727)
Q Consensus 400 ~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~ 478 (727)
+++..|+.|.++. ...+.++..|++.++.+...++..+++.|+++++|.+.++|+++..|.........+++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 7788888888775 456678889999888775557788999999999999999999999998876555667889999999
Q ss_pred ecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE
Q 004860 479 TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (727)
Q Consensus 479 gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (727)
||+++++.+.+++.+.+ ++++++.||+||++.+++..........+++|+|++++.++|+|++++++|.|+. |||++
T Consensus 335 gg~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~~~~~g~~--Gel~v 411 (557)
T PRK07059 335 GGMAVQRPVAERWLEMT-GCPITEGYGLSETSPVATCNPVDATEFSGTIGLPLPSTEVSIRDDDGNDLPLGEP--GEICI 411 (557)
T ss_pred ccccCCHHHHHHHHHHh-CCCeeeccccccccchhhcCCCCCCCcCCcccCccCCcEEEEECCCCCCCCCCCc--eEEEE
Confidence 99999998888777665 6899999999999876544433222345689999999999999999999999986 99999
Q ss_pred e-----cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 559 F-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 559 ~-----~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
. .||++. ++.+...|.. ..||+|||+|++++||+++++||+||+||++|++|+|.|||++|.
T Consensus 412 ~g~~~~~gY~~~------~~~~~~~~~~------~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~- 478 (557)
T PRK07059 412 RGPQVMAGYWNR------PDETAKVMTA------DGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVA- 478 (557)
T ss_pred eCCccchhhhcC------HHHHhhhccc------CCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHH-
Confidence 3 455543 3344444432 229999999999999999999999999999999999999999995
Q ss_pred cCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHH
Q 004860 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVL 713 (727)
Q Consensus 634 ~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L 713 (727)
.+|+|.+++|++.++...+ +.++++++..+. ..+.++ +++.+++.|++|++|..+++++++|+|++||++|+.|
T Consensus 479 ~~~~V~~~~v~~~~~~~~g-e~~~~~v~~~~~-~~~~~~----l~~~~~~~l~~~~~P~~i~~v~~~P~t~~GK~~r~~L 552 (557)
T PRK07059 479 SHPGVLEVAAVGVPDEHSG-EAVKLFVVKKDP-ALTEED----VKAFCKERLTNYKRPKFVEFRTELPKTNVGKILRREL 552 (557)
T ss_pred hCCceeEEEEEecccCCCC-eeEEEEEEeCCC-CCCHHH----HHHHHHHhcccccCCcEEEEeccCCCCcccceeHHHH
Confidence 8999999999999888777 889999886542 334344 4455778899999999999999999999999999999
Q ss_pred HHH
Q 004860 714 RDQ 716 (727)
Q Consensus 714 ~~~ 716 (727)
+++
T Consensus 553 ~~~ 555 (557)
T PRK07059 553 RDG 555 (557)
T ss_pred Hhh
Confidence 864
No 89
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7e-62 Score=551.56 Aligned_cols=498 Identities=20% Similarity=0.213 Sum_probs=387.0
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+|+++|++..+. ++||+||.++++++|+.|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 20 a~~~p~~~a~~~~~~--------~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~G~~~v~l~ 91 (540)
T PRK06164 20 ARARPDAVALIDEDR--------PLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARLGATVIAVN 91 (540)
T ss_pred HHhCCCCeEEecCCC--------cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHhCcEEEecC
Confidence 478999999996555 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh----CC--CcEEEEcCCCCCCCCCCCcCcccHHHHhcc
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA----AP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~----~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (727)
+..+.+++.++++++++++++++++... .+....+... .+ ..++++....... . ......+.+....
T Consensus 92 ~~~~~~~l~~~i~~~~~~~ii~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 164 (540)
T PRK06164 92 TRYRSHEVAHILGRGRARWLVVWPGFKG----IDFAAILAAVPPDALPPLRAIAVVDDAADAT--P-APAPGARVQLFAL 164 (540)
T ss_pred CCCCcHHHHHHHHhcCccEEEEcccccc----ccHHHHhhcccccccCCcceEEEeccCcccC--C-CCCcccccccccc
Confidence 9999999999999999999999875421 1111111111 01 1222222111000 0 0000111111111
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHh
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (727)
.... ...........++++++++|||||||+||||+++|+++.+.+......+++.+++++++.+|++|.+++..++.+
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~ 243 (540)
T PRK06164 165 PDPA-PPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGVFGFSTLLGA 243 (540)
T ss_pred cccC-CcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHHH
Confidence 1000 000001122346889999999999999999999999999988888888899999999999999999999889999
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecC-CCChhhHHHHHhhCCC
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE-TSNVDDDLWLSSKAWY 497 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe-~l~~~~~~~~~~~~~~ 497 (727)
+..|+++++.+ ..++..+++.|+++++|++.++|+++..|.+.. ....++++++.+.++|. +...+...++... +
T Consensus 244 l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~ 319 (540)
T PRK06164 244 LAGGAPLVCEP-VFDAARTARALRRHRVTHTFGNDEMLRRILDTA-GERADFPSARLFGFASFAPALGELAALARAR--G 319 (540)
T ss_pred HhcCceEEecC-CCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-cccCCCcceeeeeeccCCcchHHHHHHHhhc--C
Confidence 99999998876 567889999999999999999999999998762 34556889998877764 4444555565544 6
Q ss_pred CcccccccccccccccccCCCCC--CccccccccCC-CCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCcc
Q 004860 498 NAIIESCGGTELSSAYIQGSLLQ--PQAFGAFSTAT-MTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDR 568 (727)
Q Consensus 498 ~~l~n~YG~TE~~~~~~~~~~~~--~~~~~~iG~p~-~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~ 568 (727)
+++++.||+||++..++...... .......|.|+ +++.++|+| +++++++.|+. |||+| ..||++
T Consensus 320 ~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g~~--Gel~v~g~~~~~gY~~---- 393 (540)
T PRK06164 320 VPLTGLYGSSEVQALVALQPATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDGES--GEIEIRAPSLMRGYLD---- 393 (540)
T ss_pred CceecceeeccccceeeccCCCCCCcceeccCccccCCCeEEEEecCCCCcCCCCCCe--eEEEEecccccccccC----
Confidence 88999999999987654443321 12234567775 789999999 57899999985 99999 345655
Q ss_pred ccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecC
Q 004860 569 LLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSP 648 (727)
Q Consensus 569 ~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~ 648 (727)
+++.++..|..+ .||+|||+|++++||++++.||.||+||++|++|+|.|||++|. .||+|.+++|++.+.
T Consensus 394 --~~~~t~~~~~~~------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~-~~~~v~~~~v~~~~~ 464 (540)
T PRK06164 394 --NPDATARALTDD------GYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALE-ALPGVAAAQVVGATR 464 (540)
T ss_pred --CchhhhhcccCC------CceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHH-hCCCceeEEEEecCC
Confidence 334555555432 29999999999999999999999999999999999999999995 999999999999874
Q ss_pred CCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCc---hhhHHHHHHHHhhhhccc
Q 004860 649 AGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASN---KLLRRVLRDQIKHELSVR 724 (727)
Q Consensus 649 ~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~G---KvdR~~L~~~~~~~~~~~ 724 (727)
.++ +.++++++++++...+.+++.+ .+++.||+|++|..|++++++|+|++| |++|+.|++++++...++
T Consensus 465 -~~~-~~~~~~vv~~~~~~~~~~~l~~----~~~~~l~~~~~P~~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~~~~~~~ 537 (540)
T PRK06164 465 -DGK-TVPVAFVIPTDGASPDEAGLMA----ACREALAGFKVPARVQVVEAFPVTESANGAKIQKHRLREMAQARLAAE 537 (540)
T ss_pred -CCc-eeEEEEEEeCCCCCCCHHHHHH----HHHhhcccCcCCcEEEEecCCCCCCCCccccccHHHHHHHHHHhhhhh
Confidence 334 7899999988765555555554 577789999999999999999999999 999999999988776654
No 90
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.8e-62 Score=548.13 Aligned_cols=466 Identities=18% Similarity=0.188 Sum_probs=371.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+||++|+++.+. .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 45 a~~~p~~~a~~~~~~--------~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~vpl~ 116 (516)
T PRK13383 45 AARWPGRTAIIDDDG--------ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADVVPIS 116 (516)
T ss_pred HHHCCCCcEEEeCCC--------cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEEEEcC
Confidence 468999999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
|.++.+++.+++++++++++++++.+.. .+.. .......+... . . .. ....
T Consensus 117 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~-~~~~~~~~~~~-----------~--~-~~-~~~~---- 167 (516)
T PRK13383 117 TEFRSDALAAALRAHHISTVVADNEFAE---------RIAG-ADDAVAVIDPA-----------T--A-GA-EESG---- 167 (516)
T ss_pred ccCCHHHHHHHHhcCCCCEEEEchhHHH---------HHHh-hhcceEEeccc-----------h--h-hh-hcCC----
Confidence 9999999999999999999999875431 1111 11122222100 0 0 00 0000
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHH--HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcC
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR--CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNG 422 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~--~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G 422 (727)
..+...++.++++|||||||+||||+++|..... ........+++.++|+++...|+.|.+++..++.++..|
T Consensus 168 -----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~~l~~G 242 (516)
T PRK13383 168 -----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLMLTIALG 242 (516)
T ss_pred -----CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHHHHhcC
Confidence 0011235668999999999999999999974321 122223456788999999999999999998788899999
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC--CCCCccceeEEEeecCCCChhhHHHHHhhCCCCcc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAI 500 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l 500 (727)
+++++.. ..++..+++.++++++|.+.++|+++..|...... ...+++++|.+++||++++++..+++.+.+ ++.+
T Consensus 243 ~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-g~~v 320 (516)
T PRK13383 243 GTVLTHR-HFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-GDIL 320 (516)
T ss_pred CEEEECC-CCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHc-Cchh
Confidence 9998765 56788999999999999999999999999865321 233578999999999999999998888876 5789
Q ss_pred cccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCcccccccccccccc
Q 004860 501 IESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFR 580 (727)
Q Consensus 501 ~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~ 580 (727)
++.||+||++..+...........+++|+|+++++++|+|+++++++.|+. |||++...... ..|.+... ..+
T Consensus 321 ~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~g~~~~--~~Y~~~~~--~~~- 393 (516)
T PRK13383 321 YNGYGSTEVGIGALATPADLRDAPETVGKPVAGCPVRILDRNNRPVGPRVT--GRIFVGGELAG--TRYTDGGG--KAV- 393 (516)
T ss_pred hhcccccccccceeccccccccCCCcccCCCCCcEEEEECCCCCCCCCCCc--eEEEEecCccc--ccccCCch--hhe-
Confidence 999999999865443322223345689999999999999999999999986 99998422111 01112111 111
Q ss_pred ccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEE
Q 004860 581 GMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFV 660 (727)
Q Consensus 581 ~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~v 660 (727)
.. .||+|||+|+++++|++++.||.||+||++|++|+|.|||.+|. +||.|.+++|++.++...+ +.++++|
T Consensus 394 ----~~--g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~~~v 465 (516)
T PRK13383 394 ----VD--GMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALA-AHPAVADNAVIGVPDERFG-HRLAAFV 465 (516)
T ss_pred ----ec--CceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccccccC-ceEEEEE
Confidence 12 39999999999999999999999999999999999999999995 9999999999999988777 8999999
Q ss_pred EecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 661 VLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 661 v~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
+++++...+.+++ ++.++++|++|++|..++++++||+|++||++|+.|+
T Consensus 466 ~~~~~~~~~~~~l----~~~~~~~l~~~~~p~~i~~v~~iP~t~~gKi~r~~L~ 515 (516)
T PRK13383 466 VLHPGSGVDAAQL----RDYLKDRVSRFEQPRDINIVSSIPRNPTGKVLRKELP 515 (516)
T ss_pred EECCCCCCCHHHH----HHHHHHhcccCCCCcEEEEeCCCCCCCCCcCcHHHhC
Confidence 9887655554444 4457778899999999999999999999999999985
No 91
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-62 Score=554.05 Aligned_cols=493 Identities=22% Similarity=0.283 Sum_probs=382.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+.++|+++|+++.+. .+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 34 a~~~p~~~a~~~~~~--------~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vpi~ 105 (563)
T PRK06710 34 ASRYPEKKALHFLGK--------DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQTN 105 (563)
T ss_pred HHHCCCceEEEecCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEeccC
Confidence 368999999999776 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCC------------------CCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVG------------------IPLR 326 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------~~~~ 326 (727)
|.++.+++.++++.++++++++++....... .+........+++........ ....
T Consensus 106 p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 106 PLYTERELEYQLHDSGAKVILCLDLVFPRVT------NVQSATKIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cccCHHHHHHHHhccCCeEEEEeccchhhhh------ccchhhccceeEEeccccccccccccccchhhccccccccccc
Confidence 9999999999999999999999875322111 111111111111110000000 0000
Q ss_pred -cC-cccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch-hcCCCC-CCEEEE
Q 004860 327 -EQ-DLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKV-GDVYCW 402 (727)
Q Consensus 327 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~~~~-~d~~l~ 402 (727)
.. ...|..+..... .........++++++++|||||||.||||+++|++++........ .++... ++++++
T Consensus 180 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~ 254 (563)
T PRK06710 180 ESETIHLWNSVEKEVN-----TGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLG 254 (563)
T ss_pred ccchhhhhhhhhhccc-----cccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEE
Confidence 00 001222111100 001111223578999999999999999999999998755433222 234444 457888
Q ss_pred ecccccccchH-HhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecC
Q 004860 403 PTNLGWVMGPV-ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (727)
Q Consensus 403 ~~~~~~~~~~~-~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe 481 (727)
..|+.|.++.. .++.++..|+++++.+ ..++..+++.|+++++|++.++|+++..|+........++++||.+++||+
T Consensus 255 ~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~ 333 (563)
T PRK06710 255 VLPFFHVYGMTAVMNLSIMQGYKMVLIP-KFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSA 333 (563)
T ss_pred eCchHHHHHHHHHHHHHHHcCCeEEEcC-CCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCC
Confidence 99999988774 4567889999999876 467789999999999999999999999998765555566789999999999
Q ss_pred CCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEEe-
Q 004860 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLF- 559 (727)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~- 559 (727)
+++++...++.+.+ +++++|.||+||++..............+++|+|.+++.++|+| ++++++|.|+. |||++.
T Consensus 334 ~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g~~--Gel~v~g 410 (563)
T PRK06710 334 PLPVEVQEKFETVT-GGKLVEGYGLTESSPVTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPGEI--GEIVVKG 410 (563)
T ss_pred cCCHHHHHHHHHhh-CCCEecccccccCccccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCCCc--eEEEEec
Confidence 99999988887665 67899999999998754333222233456899999999999998 67899999986 999983
Q ss_pred ----cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcC
Q 004860 560 ----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQAD 635 (727)
Q Consensus 560 ----~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~ 635 (727)
.||++ +++.+...|. ..||+|||++++++||+++++||.||+||++|.+|+|.|||++|. +|
T Consensus 411 ~~~~~gY~~------~~~~~~~~~~-------~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~-~~ 476 (563)
T PRK06710 411 PQIMKGYWN------KPEETAAVLQ-------DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLY-EH 476 (563)
T ss_pred CccchhhhC------ChHHHhhhcc-------cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHH-hC
Confidence 34443 3334444442 139999999999999999999999999999999999999999995 99
Q ss_pred CCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHH
Q 004860 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRD 715 (727)
Q Consensus 636 p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~ 715 (727)
|.|.+++|++.++...+ +.++++++..++...+.+++.+ +++++|++|++|..|+++++||+|++||++|+.|++
T Consensus 477 ~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~P~~~~~v~~iP~t~~GKi~r~~L~~ 551 (563)
T PRK06710 477 EKVQEVVTIGVPDPYRG-ETVKAFVVLKEGTECSEEELNQ----FARKYLAAYKVPKVYEFRDELPKTTVGKILRRVLIE 551 (563)
T ss_pred cceeeEEEEccccCCcC-ceeEEEEEECCCCCCCHHHHHH----HHHHhcccccCCcEEEEcccCCCCccchhhHHHHHH
Confidence 99999999999988777 8999999988776555555544 567789999999999999999999999999999999
Q ss_pred HHhhh
Q 004860 716 QIKHE 720 (727)
Q Consensus 716 ~~~~~ 720 (727)
++..+
T Consensus 552 ~~~~~ 556 (563)
T PRK06710 552 EEKRK 556 (563)
T ss_pred HHhhc
Confidence 88655
No 92
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-62 Score=560.06 Aligned_cols=500 Identities=15% Similarity=0.134 Sum_probs=371.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh---h-cCCC-----------CEEEEEcCCCHHHHHHH
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT---M-FSKG-----------DAIAIDMPMTVRAVIIY 250 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~---~-v~~g-----------d~Vai~~~~s~~~vva~ 250 (727)
++++||++|+++... ...++.+||+||.++++++|++|.+ + +++| |+|+|+++|+++|++++
T Consensus 71 ~~~~p~~~Al~~~~~---g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~ 147 (746)
T PTZ00342 71 YKLNNNKIAIVEHSC---GEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVAD 147 (746)
T ss_pred HhhcCCceeEeccCC---CCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHH
Confidence 478999999986421 1134689999999999999999996 6 9998 99999999999999999
Q ss_pred HHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCC--------
Q 004860 251 LAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGND-------- 320 (727)
Q Consensus 251 lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~-------- 320 (727)
+||+++|++.||+++.++.+++.++|+++++++|+++.... +.+......++. .++++......
T Consensus 148 lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~ 221 (746)
T PTZ00342 148 LACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLV------EGLLERKNELPHLKKLIILDTLIKSKEININKE 221 (746)
T ss_pred HHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHH------HHHHHhhccCCCceEEEEECCCCcccccccccc
Confidence 99999999999999999999999999999999999976432 222222223332 23333321100
Q ss_pred ----------CCCC------------------------C------------------CcCcccHHHHhcccCCCCCCCCC
Q 004860 321 ----------VGIP------------------------L------------------REQDLSWKDFLSSVDYHPRPNYY 348 (727)
Q Consensus 321 ----------~~~~------------------------~------------------~~~~~~~~~~~~~~~~~~~~~~~ 348 (727)
.... . ......|+++..... ...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~ 296 (746)
T PTZ00342 222 EKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKT-----TNY 296 (746)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcc-----cCC
Confidence 0000 0 000011222211110 011
Q ss_pred CCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhc--CCCCCCEEEEecccccccchHHhHHhhhcCcEEE
Q 004860 349 SPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLA 426 (727)
Q Consensus 349 ~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv 426 (727)
......++++|+|+|||||||.||||++||+|+++.+....... ...+.|++++++|++|.++....+.+++.|++++
T Consensus 297 ~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~ 376 (746)
T PTZ00342 297 KIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTIN 376 (746)
T ss_pred CCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEE
Confidence 12234679999999999999999999999999988776543321 2335689999999999999876778899999999
Q ss_pred EecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhc--------CCCCC-------------------------------
Q 004860 427 LYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NCLEG------------------------------- 467 (727)
Q Consensus 427 ~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~--------~~~~~------------------------------- 467 (727)
+.++ ++..+++.|+++++|++.++|.++..|... +....
T Consensus 377 ~~~~--~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~~k 454 (746)
T PTZ00342 377 IWSK--DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHISSK 454 (746)
T ss_pred EeCC--CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 9864 678899999999999999999999988652 10000
Q ss_pred ---CCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCC-CCceEEEEC-CC
Q 004860 468 ---LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTAT-MTAGLVILD-EC 542 (727)
Q Consensus 468 ---~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~-~~~~~~vld-~~ 542 (727)
...++||.+++||+++++++.+++...+ +++++++||+||+++..+.... .....+++|+|+ |+++++|+| ++
T Consensus 455 ir~~lg~~lr~~~sGGapl~~~~~~~~~~~~-g~~i~~gYGlTEt~~~~~~~~~-~~~~~gsvG~p~~pg~e~ki~d~~~ 532 (746)
T PTZ00342 455 IKDKVNPNLEVILNGGGKLSPKIAEELSVLL-NVNYYQGYGLTETTGPIFVQHA-DDNNTESIGGPISPNTKYKVRTWET 532 (746)
T ss_pred HHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc-CCCEEEeeccCcccceeeeccC-CCCCcccccCcCCCcEEEEEecccc
Confidence 0025899999999999999999988765 6889999999999765544333 234568999998 999999998 43
Q ss_pred CCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeec
Q 004860 543 GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL 617 (727)
Q Consensus 543 ~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~ 617 (727)
+...+.+.. |||++ ..||++ +++.|++.|..+ | ||+|||+|++|+||+|+|+||+||+||+
T Consensus 533 ~~~~~~~~~--GEl~vrGp~v~~GY~~------~pe~T~~~f~~d----G--W~~TGDig~~d~dG~l~i~gR~kdlIkl 598 (746)
T PTZ00342 533 YKATDTLPK--GELLIKSDSIFSGYFL------EKEQTKNAFTED----G--YFKTGDIVQINKNGSLTFLDRSKGLVKL 598 (746)
T ss_pred cccCCCCCc--eEEEEecCcccccccC------ChhhhhhhcCcC----C--cccCCcEEEECCCCeEEEEccCCCeEEe
Confidence 344443433 89988 345555 455777777532 2 9999999999999999999999999995
Q ss_pred -CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCC----------------CC-CCh---------
Q 004860 618 -GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKG----------------FT-SQP--------- 670 (727)
Q Consensus 618 -~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~----------------~~-~~~--------- 670 (727)
+|++|+|.+||++|. +||.|.+|+|++.. .. ..++|.|++... .. .+.
T Consensus 599 s~Ge~I~p~eIE~~l~-~~p~V~~~~VvG~~---~~-~~~~Alvv~d~~~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~~ 673 (746)
T PTZ00342 599 SQGEYIETDMLNNLYS-QISFINFCVVYGDD---SM-DGPLAIISVDKYLLFKCLKDDNMLESTGINEKNYLEKLTDETI 673 (746)
T ss_pred CCCEEEchHHHHHHHh-cCCCccEEEEEccC---Cc-cccEEEEECCHHHHHHHHHhcCCccccccCcccHHHHhhhhhh
Confidence 799999999999995 99999999999852 12 479999988641 00 011
Q ss_pred --HHHHHHHHHHH-----HhhcCCCcccceEEEcC-CC----CCCCCchhhHHHHHHHHhhhhc
Q 004860 671 --DKLKMIFSKAI-----QSKLNPLFKVSLVKVVP-EF----PRTASNKLLRRVLRDQIKHELS 722 (727)
Q Consensus 671 --~~l~~~l~~~l-----~~~L~~~~~P~~i~~v~-~l----P~t~~GKvdR~~L~~~~~~~~~ 722 (727)
.++++.+.+.+ +..|+.|.++..|.+++ .+ -+||+.|+.|+.+.+.|+..++
T Consensus 674 ~~~~~~~~v~~~~~~~~~~~~l~~~e~i~~~~l~~~~~t~~~~lTpt~KlkR~~v~~~y~~~i~ 737 (746)
T PTZ00342 674 NNNIYVDYVKGKMLEVYKKTNLNRYNIINDIYLTSKVWDTNNYLTPTFKVKRFYVFKDYAFFID 737 (746)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCccceeeeeEEEecCCCCCCCccChhhhhhHHHHHHHHHHHHH
Confidence 12334444333 23699999999888875 33 2999999999999999985554
No 93
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.2e-61 Score=549.33 Aligned_cols=489 Identities=22% Similarity=0.215 Sum_probs=381.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++.+|+++|+++.+. .+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 31 ~~~~p~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~ 102 (541)
T TIGR03205 31 AADYGPRPALEFRDR--------PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARVVHLS 102 (541)
T ss_pred HHHcCCCceEEECCc--------EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEEEecC
Confidence 368999999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh-CCCcEEEEcCCCCC-C-----CCCCCcCcccHHHHhc
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA-APLKAIVLPAIGND-V-----GIPLREQDLSWKDFLS 337 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~-~-----~~~~~~~~~~~~~~~~ 337 (727)
|.++.+++.+++++++++.+++++... ..+...+.... .....+++...... . .........+|.+++.
T Consensus 103 ~~~~~~~l~~~i~~~~~~~vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (541)
T TIGR03205 103 PLDGERALSHKLSDSGARLLITSDLAA----LLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYADFVK 178 (541)
T ss_pred CCCCHHHHHHHHhhcCceEEEEeCchh----hhHHHHHhhhcccceEEEEecccccccccccccccCCCcccccHHHHHh
Confidence 999999999999999999999976310 01111111111 11222232221100 0 0011122345666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch-----hcCCCCCCEEEEecccccccch
Q 004860 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-----HIDLKVGDVYCWPTNLGWVMGP 412 (727)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-----~~~~~~~d~~l~~~~~~~~~~~ 412 (727)
.... ........++++++++|||||||.||||+++|+++.+....... .......+++++..|+.|..+.
T Consensus 179 ~~~~-----~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~ 253 (541)
T TIGR03205 179 GAAA-----PAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERVICVLPLFHIYAL 253 (541)
T ss_pred cCCC-----CCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceEEEeccHHHHHHH
Confidence 3211 11112345789999999999999999999999998765432211 1122345789999999998876
Q ss_pred -HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHH
Q 004860 413 -VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWL 491 (727)
Q Consensus 413 -~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~ 491 (727)
..++.++..|+++++.. ..++..+++.|+++++|++.++|+++..|.+.......+++++|.+++||++++++..+++
T Consensus 254 ~~~~~~~l~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 254 TVILLRSLRRGDLISLHQ-RFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 44778899999988775 5678999999999999999999999999987544445567899999999999999988888
Q ss_pred HhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEE--CCCCCcCCCCCCeeeeEEEe-----cccCC
Q 004860 492 SSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVIL--DECGVPYPDDQPCVGEVGLF-----PLYLG 564 (727)
Q Consensus 492 ~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vl--d~~~~~~p~G~~giGel~v~-----~~y~~ 564 (727)
.+.+ +.++++.||+||++..++..........+++|+|++++.++|+ |+++++++.|+. |||++. .||++
T Consensus 333 ~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g~~--Gel~v~~~~~~~gy~~ 409 (541)
T TIGR03205 333 ERKT-GLKLKSGWGMTETCSPGTGHPPEGPDKPGSIGLMLPGIELDVVSLDDPTKVLPPGEV--GELRIRGPNVTRGYWN 409 (541)
T ss_pred HHHh-CCCeecccccccCCcccccCCCCCCCCCCCcceeccCceeEEEecCCCCccCCCCCe--eEEEEecCCccccccC
Confidence 7655 5889999999999876554443333445689999999998875 677899999985 999983 34554
Q ss_pred CCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEE
Q 004860 565 ASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAI 644 (727)
Q Consensus 565 ~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv 644 (727)
. ++.+++.|.. + ||+|||++++++||+++++||.||+||++|++|+|.|||+++. +||+|.+++|+
T Consensus 410 ~------~~~~~~~~~~-----~--~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~-~~~~v~~~~v~ 475 (541)
T TIGR03205 410 R------PEESAEAFVG-----D--RFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIY-EHPGVQEVIVI 475 (541)
T ss_pred C------hhhhHhhhcc-----C--CcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHH-hCCCeeeEEEE
Confidence 3 3345555531 2 7999999999999999999999999999999999999999996 89999999999
Q ss_pred eecCCCCCceEEEEEEEecCCCC-CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 645 SVSPAGGGPEVLVIFVVLKKGFT-SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 645 ~~~~~~~~~~~l~a~vv~~~~~~-~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
+++++..+ +.++++++++++.. .+.++ ++++++++|++|++|..|+++++||+|++||++|+.|+
T Consensus 476 ~~~~~~~~-~~~~~~v~~~~~~~~~~~~~----l~~~~~~~l~~~~~P~~i~~~~~iP~t~~gK~~r~~l~ 541 (541)
T TIGR03205 476 GIPDQYRG-EAAKAFVKLRPGAKPFSLDE----LRAFLAGKLGKHELPVAVEFVDELPRTPVGKLSRHELR 541 (541)
T ss_pred ecCCcccC-ceEEEEEEECCCCCcCCHHH----HHHHHHhhcccccCCcEEEEeccCCCCcccceeHhhcC
Confidence 99988777 88999999886532 34444 44557788999999999999999999999999999874
No 94
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=2.9e-61 Score=548.62 Aligned_cols=504 Identities=20% Similarity=0.237 Sum_probs=385.6
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+..+|+++|+++.+. ++||+||+++++++|..|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 30 ~~~~p~~~a~~~~~~--------~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~ 101 (567)
T PLN02479 30 AVVHPTRKSVVHGSV--------RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGVPMAGAVVNCVN 101 (567)
T ss_pred HhhCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhCCcEEEEec
Confidence 367999999998665 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh---------CCCcEEEEcCCCCC---CCCCCCcCcccH
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA---------APLKAIVLPAIGND---VGIPLREQDLSW 332 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~---~~~~~~~~~~~~ 332 (727)
|.++.+++.+++++++++++++++.... ....+... ....++++...... .......+...|
T Consensus 102 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (567)
T PLN02479 102 IRLNAPTIAFLLEHSKSEVVMVDQEFFT------LAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGKGAIEY 175 (567)
T ss_pred cccCHHHHHHHHhhcCceEEEEchhhhh------HHHHHHHHHhhcccccCCCceEEEecCCcCCccccccccccCcccH
Confidence 9999999999999999999999875421 11111111 11123333211100 000112234456
Q ss_pred HHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch
Q 004860 333 KDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP 412 (727)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~ 412 (727)
.+++..... . .. .......+++++++|||||||.||||+++|+++..........+++.+++++++.+|++|..++
T Consensus 176 ~~~~~~~~~--~-~~-~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~ 251 (567)
T PLN02479 176 EKFLETGDP--E-FA-WKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLPMFHCNGW 251 (567)
T ss_pred HHHHhcccc--c-cc-cCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecchhhhhhH
Confidence 666554221 0 00 0112234577889999999999999999999987666555566788899999999999998887
Q ss_pred HHhHH-hhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCC-CCccceeEEEeecCCCChhhHHH
Q 004860 413 VILFS-SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG-LDWTKIRSFASTGETSNVDDDLW 490 (727)
Q Consensus 413 ~~~~~-~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~-~~l~~Lr~i~~gGe~l~~~~~~~ 490 (727)
...+. ++..|.++++ . ..++..++++++++++|++..+|++++.|........ .++++++.++++|+++++.+.++
T Consensus 252 ~~~~~~~~~~g~~~~~-~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~ 329 (567)
T PLN02479 252 CFTWTLAALCGTNICL-R-QVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFA 329 (567)
T ss_pred HHHHHHHhhcCceEec-c-CCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCHHHHHH
Confidence 44443 4555555544 3 4678899999999999999999999999987543222 25789999999999999998887
Q ss_pred HHhhCCCCcccccccccccccccccCCCC---------C-CccccccccCCCCce-EEEEC-CCCCcCCCCCCeeeeEEE
Q 004860 491 LSSKAWYNAIIESCGGTELSSAYIQGSLL---------Q-PQAFGAFSTATMTAG-LVILD-ECGVPYPDDQPCVGEVGL 558 (727)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---------~-~~~~~~iG~p~~~~~-~~vld-~~~~~~p~G~~giGel~v 558 (727)
+.+. +.++++.||+||+++.++..... . .......|.+.++.. ++|+| ++++++|.+...+|||++
T Consensus 330 ~~~~--~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v 407 (567)
T PLN02479 330 MSEK--GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVM 407 (567)
T ss_pred HHhc--CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEE
Confidence 7654 57899999999986433322100 0 001135677888875 88999 568888764211599998
Q ss_pred -----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 559 -----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
..||++. ++.+++.|.. .||+|||+|+++++|+++|+||.||+||++|++|+|.|||++|.
T Consensus 408 ~g~~~~~GY~~~------~~~t~~~~~~-------g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~- 473 (567)
T PLN02479 408 RGNMVMKGYLKN------PKANEEAFAN-------GWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVY- 473 (567)
T ss_pred eccchhhhhhcC------cccccchhcC-------CceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHH-
Confidence 3566653 3455555531 29999999999999999999999999999999999999999995
Q ss_pred cCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCC-hHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHH
Q 004860 634 ADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQ-PDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRV 712 (727)
Q Consensus 634 ~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~-~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~ 712 (727)
.||.|.+++|++.++...+ +.+++++++..+...+ .+.+.+.|+++++++||+|++|..+++ ++||+|++||++|+.
T Consensus 474 ~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~-~~iP~t~~gKv~r~~ 551 (567)
T PLN02479 474 THPAVLEASVVARPDERWG-ESPCAFVTLKPGVDKSDEAALAEDIMKFCRERLPAYWVPKSVVF-GPLPKTATGKIQKHV 551 (567)
T ss_pred hCcccceeeEEeccchhcC-ceeEEEEEecCcccccchhhhHHHHHHHHHhhcccccCCceEEe-ccCCCCCccCeeHHH
Confidence 8999999999999887776 8999999988754322 234556778889999999999988876 779999999999999
Q ss_pred HHHHHhh-hhcccCCC
Q 004860 713 LRDQIKH-ELSVRSRI 727 (727)
Q Consensus 713 L~~~~~~-~~~~~~~~ 727 (727)
|++.+.. ...++|+|
T Consensus 552 L~~~~~~~~~~~~~~~ 567 (567)
T PLN02479 552 LRAKAKEMGPVKKSRL 567 (567)
T ss_pred HHHHHHhhCCcccccC
Confidence 9998866 67888875
No 95
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=3.2e-62 Score=565.33 Aligned_cols=511 Identities=17% Similarity=0.151 Sum_probs=376.7
Q ss_pred CCCCCCceEEEEe-----------cCC----CCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHH
Q 004860 186 RRKEDNTVAIVWR-----------EDR----CDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVII 249 (727)
Q Consensus 186 a~~~pd~~Al~~~-----------~~~----~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva 249 (727)
++++||++|+.+. ++. ...+.+..+||+||+++++++|++|.++ +++||+|+|+++|+++|+++
T Consensus 68 ~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~ 147 (696)
T PLN02387 68 CKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEWLIA 147 (696)
T ss_pred HHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 4789999999542 110 0124556799999999999999999999 99999999999999999999
Q ss_pred HHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCC----
Q 004860 250 YLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGI---- 323 (727)
Q Consensus 250 ~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~---- 323 (727)
+|||+++|+++|||++.++.+++.++|++++++++|++.... +.+..+....+. .++++.........
T Consensus 148 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~------~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~ 221 (696)
T PLN02387 148 LQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQL------KKLIDISSQLETVKRVIYMDDEGVDSDSSLSG 221 (696)
T ss_pred HHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHH------HHHHHHhhccCCceEEEEECCCCchhhhhhhc
Confidence 999999999999999999999999999999999999986432 222222222332 23333221110000
Q ss_pred CCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchh-cCCCCCCEEEE
Q 004860 324 PLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-IDLKVGDVYCW 402 (727)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~-~~~~~~d~~l~ 402 (727)
.......+|.++....... ........++|+++|+|||||||.||||++||++++..+...... .++.++|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~d~~l~ 297 (696)
T PLN02387 222 SSNWTVSSFSEVEKLGKEN----PVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGKNDVYLA 297 (696)
T ss_pred cCCcEEEEHHHHHHhhccC----CCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCCCCEEEE
Confidence 0011123566665543221 111223467999999999999999999999999998877765544 36889999999
Q ss_pred ecccccccchHHhHHhhhcCcEEEEecCCC-------ChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCC---------
Q 004860 403 PTNLGWVMGPVILFSSFLNGATLALYQGSP-------LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE--------- 466 (727)
Q Consensus 403 ~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~-------~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~--------- 466 (727)
++|++|.++....+..+..|+++.+..... .+..+++.++++++|++.++|++++.+.+.....
T Consensus 298 ~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~ 377 (696)
T PLN02387 298 YLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDAKGGLAK 377 (696)
T ss_pred ECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhcccHHHH
Confidence 999999998865556677787776633211 1234567899999999999999999886431000
Q ss_pred ----------------------C--C-------------Cc-cceeEEEeecCCCChhhHHHHHhhCCCCcccccccccc
Q 004860 467 ----------------------G--L-------------DW-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (727)
Q Consensus 467 ----------------------~--~-------------~l-~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (727)
. . .+ +++|.+++||+++++++.+++...+ ++++++.||+||
T Consensus 378 ~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~-g~~v~~~YG~TE 456 (696)
T PLN02387 378 KLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICL-GAPIGQGYGLTE 456 (696)
T ss_pred HHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHc-CCCeeEeechhh
Confidence 0 0 01 5899999999999999987776555 688999999999
Q ss_pred cccccccCCCCCCccccccccCCCCceEEEEC-CCCCcC---CCCCCeeeeEEE-----ecccCCCCccccccccccccc
Q 004860 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPY---PDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (727)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~---p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f 579 (727)
+++..+.... .....+++|+|+++++++|+| +++... .++. .|||+| ..||++ +++.|++.|
T Consensus 457 t~~~~~~~~~-~~~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p--~GEi~vrGp~v~~GY~~------~pe~T~~~f 527 (696)
T PLN02387 457 TCAGATFSEW-DDTSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMP--RGEIVIGGPSVTLGYFK------NQEKTDEVY 527 (696)
T ss_pred cccceeecCc-ccCCCCccCCCCCceEEEEeeccccCcccCCCCCC--CceEEeccCcccchhcC------CHHHHhhhh
Confidence 9865544433 233567899999999999998 544322 1222 388887 456665 445677777
Q ss_pred cccccCCCceeeeeCceEEEecCceEEEEeecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEE
Q 004860 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (727)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a 658 (727)
..++ +|.+||+|||+|++|+||+|+|+||+||+||+ +|++|+|.|||++|. +||.|.+++|++.+. . ..++|
T Consensus 528 ~~d~--~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~-~~p~V~~~~V~g~~~---~-~~~~a 600 (696)
T PLN02387 528 KVDE--RGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALS-VSPYVDNIMVHADPF---H-SYCVA 600 (696)
T ss_pred cccc--CCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHh-cCCCeeEEEEEecCC---c-ceEEE
Confidence 5332 35569999999999999999999999999998 699999999999995 999999999998542 2 67899
Q ss_pred EEEecCCC----------C-CC------hHHHHHHHHHHH-----HhhcCCCcccceEEEcCCCC------CCCCchhhH
Q 004860 659 FVVLKKGF----------T-SQ------PDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPEFP------RTASNKLLR 710 (727)
Q Consensus 659 ~vv~~~~~----------~-~~------~~~l~~~l~~~l-----~~~L~~~~~P~~i~~v~~lP------~t~~GKvdR 710 (727)
+|++.+.. . .+ ..++++.+.+.+ +.+|+.|.+|+.|.++++-. +||+.|+.|
T Consensus 601 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~~~~i~l~~~~~t~~~g~lT~t~K~~R 680 (696)
T PLN02387 601 LVVPSQQALEKWAKKAGIDYSNFAELCEKEEAVKEVQQSLSKAAKAARLEKFEIPAKIKLLPEPWTPESGLVTAALKLKR 680 (696)
T ss_pred EEEeCHHHHHHHHHHcCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCCCcceeeEEEEECCCCCCCCCcCChhhhhhh
Confidence 99986421 0 01 123333333333 34799999999999987643 788889999
Q ss_pred HHHHHHHhhhhcc
Q 004860 711 RVLRDQIKHELSV 723 (727)
Q Consensus 711 ~~L~~~~~~~~~~ 723 (727)
+.+.+.|++++++
T Consensus 681 ~~i~~~y~~~i~~ 693 (696)
T PLN02387 681 EQIRKKFKDDLKK 693 (696)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998864
No 96
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.6e-61 Score=548.66 Aligned_cols=511 Identities=20% Similarity=0.222 Sum_probs=390.0
Q ss_pred cCCCCcccHhhhhccCCCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH
Q 004860 167 WLPGSVLNIAECCLLPSNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR 245 (727)
Q Consensus 167 w~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~ 245 (727)
|++....+..+.+ ..+ ++.+||++|+.+.+. .+||.||+++++++|++|.+. +++|++|+++++|+++
T Consensus 27 ~~~~~~~~l~~~l-~~~--a~~~p~~~al~~~~~--------~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~ 95 (567)
T PRK06178 27 EYPHGERPLTEYL-RAW--ARERPQRPAIIFYGH--------VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQ 95 (567)
T ss_pred CCCcCcccHHHHH-HHH--HHHCCCceEEEECCc--------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcH
Confidence 5544444444333 222 367899999998776 899999999999999999999 9999999999999999
Q ss_pred HHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCC-CCCC---
Q 004860 246 AVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI-GNDV--- 321 (727)
Q Consensus 246 ~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~--- 321 (727)
++++++||+++|++++|++|.++.+++.+++++++++++++++... +.+..+........+++... +...
T Consensus 96 ~~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~------~~l~~~~~~~~~~~i~~~~~~~~~~~~~ 169 (567)
T PRK06178 96 FHIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLA------PVVEQVRAETSLRHVIVTSLADVLPAEP 169 (567)
T ss_pred HHHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchH------HHHHHhhccCCcceEEEecccccccccc
Confidence 9999999999999999999999999999999999999999987532 11222222222222222111 1000
Q ss_pred CCCCCc-------CcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch-hcC
Q 004860 322 GIPLRE-------QDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HID 393 (727)
Q Consensus 322 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~ 393 (727)
....+. ....+.++...... ...........++++++|+|||||||.||||++||++++........ ...
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~ 247 (567)
T PRK06178 170 TLPLPDSLRAPRLAAAGAIDLLPALRA--CTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVV 247 (567)
T ss_pred ccccccccccccccccccccHHHHhhc--cccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhcc
Confidence 000000 00112222221111 00111122345789999999999999999999999998876554433 356
Q ss_pred CCCCCEEEEecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccc
Q 004860 394 LKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTK 472 (727)
Q Consensus 394 ~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~ 472 (727)
+.++|++++.+|+.|..+. ..++.++.+|+++++.+ ..++..++..|+++++|.+.++|..+..+.........++++
T Consensus 248 ~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~-~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~ 326 (567)
T PRK06178 248 GGEDSVFLSFLPEFWIAGENFGLLFPLFSGATLVLLA-RWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSS 326 (567)
T ss_pred CCCCcEEEEecchHHHHHHHHHHHHHHHcCceEEEeC-CCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcch
Confidence 7899999999999998887 46788999999999987 567889999999999999999999999988765445566778
Q ss_pred eeEEEe--ecCCCChhhHHHHHhhCCCCcccccccccccccccccCCC--CC----CccccccccCCCCceEEEEC-CCC
Q 004860 473 IRSFAS--TGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQ----PQAFGAFSTATMTAGLVILD-ECG 543 (727)
Q Consensus 473 Lr~i~~--gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~----~~~~~~iG~p~~~~~~~vld-~~~ 543 (727)
++.+.. .|+.++++..+.+...++...+.+.||+||++...+.... .. ....+++|+|++|++++|+| +++
T Consensus 327 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~ 406 (567)
T PRK06178 327 LRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETHTCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETG 406 (567)
T ss_pred heeeeeccccccCCHHHHHHHHHHhCCcccccccccccccccceeccccccCccccccCCcccccccCCcEEEEEcCCCC
Confidence 887654 4589999988888877654444568999998764333221 11 12345789999999999999 679
Q ss_pred CcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecC
Q 004860 544 VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 618 (727)
Q Consensus 544 ~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~ 618 (727)
+++|.|+. |||++ ..||++. ++.++..|. +| ||+|||+|++++||+++++||+||+||++
T Consensus 407 ~~~~~g~~--Gel~v~g~~v~~gY~~~------~~~~~~~~~-----dg--~~~TGDl~~~~~~g~l~i~GR~~d~i~~~ 471 (567)
T PRK06178 407 ELLPLGAE--GEIVVRTPSLLKGYWNK------PEATAEALR-----DG--WLHTGDIGKIDEQGFLHYLGRRKEMLKVN 471 (567)
T ss_pred CcCCCCCc--eEEEEECCcccccccCC------hhhhhhccc-----CC--ceeecceEEEecCCeEEEEecccccEEEC
Confidence 99999985 99998 3455543 334444443 23 99999999999999999999999999999
Q ss_pred ceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcC
Q 004860 619 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP 698 (727)
Q Consensus 619 G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~ 698 (727)
|++|+|.|||+++. .+|+|.+++|++.++...+ +.++++|+++++...+.+++++ .+++.|++|++|. +++++
T Consensus 472 G~~i~~~eiE~~l~-~~~~v~~~~v~~~~~~~~g-~~~~~~v~~~~~~~~~~~~l~~----~~~~~l~~~~~p~-i~~v~ 544 (567)
T PRK06178 472 GMSVFPSEVEALLG-QHPAVLGSAVVGRPDPDKG-QVPVAFVQLKPGADLTAAALQA----WCRENMAVYKVPE-IRIVD 544 (567)
T ss_pred CEEECHHHHHHHHH-hCCCeeEEEEEcCcCcccC-cceEEEEEeCCCCcCCHHHHHH----HHHhcCcccCCce-EEEec
Confidence 99999999999995 8999999999999888777 8899999988765555555544 5777899999996 88899
Q ss_pred CCCCCCCchhhHHHHHHHHhh
Q 004860 699 EFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 699 ~lP~t~~GKvdR~~L~~~~~~ 719 (727)
++|+|++||++|+.|++++++
T Consensus 545 ~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 545 ALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred cCCCCCccceeHHHHHHHHHh
Confidence 999999999999999998865
No 97
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.9e-62 Score=566.13 Aligned_cols=505 Identities=17% Similarity=0.185 Sum_probs=368.3
Q ss_pred CCCCCCCceEEEEecC-----------CCC--------CCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH
Q 004860 185 HRRKEDNTVAIVWRED-----------RCD--------ESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV 244 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~-----------~~~--------~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~ 244 (727)
+++++||++|+.+... .+. .+..+.+||+||+++++++|++|.++ +++||+|+|+++|++
T Consensus 78 ~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~ 157 (700)
T PTZ00216 78 ICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRW 157 (700)
T ss_pred HHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCH
Confidence 3479999999998521 000 12457999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh--CCC-cEEEEcCCCCCC
Q 004860 245 RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--APL-KAIVLPAIGNDV 321 (727)
Q Consensus 245 ~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~~-~~~v~~~~~~~~ 321 (727)
+|++++|||+++|++++|+++.++++++.++++++++++++++.... +.+...... .+. .++++.......
T Consensus 158 e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~------~~l~~~~~~~~~~~~~ii~~~~~~~~~ 231 (700)
T PTZ00216 158 EWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNV------PNLLRLMKSGGMPNTTIIYLDSLPASV 231 (700)
T ss_pred HHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHH------HHHHHhhhhccCCceEEEEECCCcccc
Confidence 99999999999999999999999999999999999999999986421 111111111 111 233332111100
Q ss_pred CCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhc----C-CCC
Q 004860 322 GIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI----D-LKV 396 (727)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~----~-~~~ 396 (727)
........+|++++...... ...........+++++||+|||||||.||||++||+++++.+.+....+ + +.+
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 309 (700)
T PTZ00216 232 -DTEGCRLVAWTDVVAKGHSA-GSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEE 309 (700)
T ss_pred -ccCCceEEEHHHHHHhCCcc-ccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCC
Confidence 00112245677776554210 0111112334679999999999999999999999999988776654332 2 478
Q ss_pred CCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHH-------HHHHhCCCEEEechHHHHHHHhcCCC----
Q 004860 397 GDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK-------FVQDAGVTVLGTVPSLVKAWRNTNCL---- 465 (727)
Q Consensus 397 ~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~-------~i~~~~vt~l~~~P~~l~~l~~~~~~---- 465 (727)
+|++++++|++|.++.......+..|+++++.+ +..+.+ .|+++++|++.++|++++.+.+....
T Consensus 310 ~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~~----~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~ 385 (700)
T PTZ00216 310 DETYCSYLPLAHIMEFGVTNIFLARGALIGFGS----PRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPP 385 (700)
T ss_pred CCEEEEEChHHHHHHHHHHHHHHHcCCEEEECC----HHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhc
Confidence 899999999999888754555577788776632 333433 68899999999999999887642100
Q ss_pred ---------------------CCCC----------------ccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccc
Q 004860 466 ---------------------EGLD----------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTE 508 (727)
Q Consensus 466 ---------------------~~~~----------------l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE 508 (727)
...+ .++||.+++||+++++++.+++...+ + +++|.||+||
T Consensus 386 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~-~-~l~~~YG~TE 463 (700)
T PTZ00216 386 VGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVF-G-MVIQGWGLTE 463 (700)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHh-h-hHhhccCccc
Confidence 0000 15799999999999999988776654 4 8999999999
Q ss_pred cccccccCCCCCCccccccccCCCCceEEEECCCCC--cCCCCCCeeeeEEE-----ecccCCCCccccccccccccccc
Q 004860 509 LSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGV--PYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRG 581 (727)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~--~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~ 581 (727)
+++..+.... .....+++|+|++|++++|+|+++. ..+++. .|||+| +.||++ +++.|++.|..
T Consensus 464 t~~~~~~~~~-~~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~--~GEL~vrG~~v~~GY~~------~pe~T~~~f~~ 534 (700)
T PTZ00216 464 TVCCGGIQRT-GDLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEP--RGEILLRGPFLFKGYYK------QEELTREVLDE 534 (700)
T ss_pred ccccccccCC-CCCCCCCcCCcCCCeEEEEeechhhccCCCCCC--CceEEEcCCcccchhcC------ChhHhhhhccc
Confidence 9865443332 2345679999999999999997642 234444 389988 456665 44577777764
Q ss_pred cccCCCceeeeeCceEEEecCceEEEEeecCCeee-cCceeechHHHHHHHhhcCCCceee--EEEeecCCCCCceEEEE
Q 004860 582 MPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERVCDQADESILET--AAISVSPAGGGPEVLVI 658 (727)
Q Consensus 582 ~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik-~~G~ri~~~eIE~~l~~~~p~V~~a--~vv~~~~~~~~~~~l~a 658 (727)
+ | ||+|||+|++|+||+|+|+||+||+|| ++|++|+|+|||+++. +||.|.++ +|++.+ .. ..++|
T Consensus 535 d----G--w~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~-~~p~V~~~~~~v~~~~---~~-~~l~a 603 (700)
T PTZ00216 535 D----G--WFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG-QNELVVPNGVCVLVHP---AR-SYICA 603 (700)
T ss_pred c----C--CeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh-cCcCcccceEEEEEec---CC-ceEEE
Confidence 3 2 999999999999999999999999999 8999999999999995 99999973 344332 12 68999
Q ss_pred EEEecCCC----------CC------ChHHHHHHHHHHH-----HhhcCCCcccceEEEcCC------CCCCCCchhhHH
Q 004860 659 FVVLKKGF----------TS------QPDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPE------FPRTASNKLLRR 711 (727)
Q Consensus 659 ~vv~~~~~----------~~------~~~~l~~~l~~~l-----~~~L~~~~~P~~i~~v~~------lP~t~~GKvdR~ 711 (727)
+|++.... .. +..++++.+.+.+ +..|..|.+|+.|.++++ =-+||++|+.|+
T Consensus 604 ~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~e~i~~~~~~~~~f~~~~g~lT~t~K~~R~ 683 (700)
T PTZ00216 604 LVLTDEAKAMAFAKEHGIEGEYPAILKDPEFQKKATESLQETARAAGRKSFEIVRHVRVLSDEWTPENGVLTAAMKLKRR 683 (700)
T ss_pred EEecCHHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHhcCCCCceeEeEEEEECCCCCCCCCCCChhhccchH
Confidence 99875310 00 1123333444433 347889999999988753 237999999999
Q ss_pred HHHHHHhhhhcc
Q 004860 712 VLRDQIKHELSV 723 (727)
Q Consensus 712 ~L~~~~~~~~~~ 723 (727)
.+.+.|++.+++
T Consensus 684 ~i~~~y~~~i~~ 695 (700)
T PTZ00216 684 VIDERYADLIKE 695 (700)
T ss_pred HHHHHHHHHHHH
Confidence 999999988875
No 98
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.6e-61 Score=538.30 Aligned_cols=493 Identities=19% Similarity=0.176 Sum_probs=386.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+.+ ..+||+||.++++++|++|.++ +++|++|++++++++++++++|||+++|++++|++
T Consensus 7 a~~~p~~~a~~~~~~~------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 7 AQTTPDKPAVIMASTG------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVN 80 (511)
T ss_pred HhhCCCceEEEecCCC------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccc
Confidence 4789999999874321 2899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
+.++.+++.++++++++++++++.... .....+....+. ..+++...... .....+.+.......
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~- 147 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKL------DVARALLKQCPGVRHRLVLDGDGEL------EGFVGYAEAVAGLPA- 147 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhH------HHHHHHHhcCCCceEEEEecCCCCC------cccccHHHHhcCCCC-
Confidence 999999999999999999999987432 111112222221 12222111110 112234433322111
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEec--ChHHH---HHHHhhchhcCCCCCCEEEEecccccccchHHhHH
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWT--QLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFS 417 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~t--h~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~ 417 (727)
....+.++.++++|||||||.||||+++ |.++. +........+++.+++++++..|++|+.++...+.
T Consensus 148 -------~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~ 220 (511)
T PRK13391 148 -------TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVML 220 (511)
T ss_pred -------CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHH
Confidence 0111334678999999999999999964 66543 23333445677889999999999999988877788
Q ss_pred hhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhC
Q 004860 418 SFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKA 495 (727)
Q Consensus 418 ~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~ 495 (727)
++..|+++++.+ ..++..+++.++++++|++.++|+++..+.+... ....+++++|.+++||++++++...++.+.+
T Consensus 221 ~~~~g~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~ 299 (511)
T PRK13391 221 VIRLGGTVIVME-HFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWW 299 (511)
T ss_pred HHHcCceEEECC-CCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHc
Confidence 999999999986 4678899999999999999999999998876532 2234678999999999999999988887765
Q ss_pred CCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCccccccccc
Q 004860 496 WYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHE 575 (727)
Q Consensus 496 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~ 575 (727)
+..+++.||+||++.+............+++|+|+++ .++|+|+++++++.|+. |||++...+. ..++.+++.+
T Consensus 300 -g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~g-~~~i~d~~~~~~~~g~~--Gel~~~g~~~--~gy~~~~~~~ 373 (511)
T PRK13391 300 -GPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMFG-DLHILDDDGAELPPGEP--GTIWFEGGRP--FEYLNDPAKT 373 (511)
T ss_pred -CCceeeeeccccccceEEecCccccccCCCcCCcccc-eEEEECCCCCCCCCCCc--eEEEEecCcc--eEEcCChhHh
Confidence 5789999999999875443322223445789999999 69999999999999986 9999843321 1122234445
Q ss_pred cccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceE
Q 004860 576 EVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEV 655 (727)
Q Consensus 576 ~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~ 655 (727)
+..|..+ ..||+|||+|++++||++++.||.||++|++|++|++.|||++|. +||.|.+++|++.++...+ +.
T Consensus 374 ~~~~~~~-----~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~-~~~~v~~~~v~~~~~~~~g-~~ 446 (511)
T PRK13391 374 AEARHPD-----GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLI-THPKVADAAVFGVPNEDLG-EE 446 (511)
T ss_pred HHhhccC-----CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHH-hCCCcceEEEEecCCcccC-ce
Confidence 5444322 249999999999999999999999999999999999999999996 8999999999999888877 88
Q ss_pred EEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 656 LVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 656 l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
+++++++.++...+ +.+.+.+++++++.||+|++|..|.+++++|+|+|||++|+.|++.+.+
T Consensus 447 ~~~~~~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~~~~ 509 (511)
T PRK13391 447 VKAVVQPVDGVDPG-PALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDRYWG 509 (511)
T ss_pred eEEEEEECCCCCcc-cchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHHhhc
Confidence 99999887654333 3445667778899999999999999999999999999999999998764
No 99
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.3e-60 Score=535.21 Aligned_cols=487 Identities=20% Similarity=0.193 Sum_probs=379.5
Q ss_pred eEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHH
Q 004860 193 VAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAARE 271 (727)
Q Consensus 193 ~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~ 271 (727)
.|++..++ .+||.||+++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++|.++.++
T Consensus 3 ~~~~~~~~--------~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 74 (509)
T PRK12406 3 ATIISGDR--------RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE 74 (509)
T ss_pred eEEEECCe--------eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH
Confidence 46666555 999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEE--cCCCC-------CC-CCCCCcCcccHHHHhcccCC
Q 004860 272 IATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVL--PAIGN-------DV-GIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 272 l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~ 341 (727)
+.++++++++++++++..... .+.+..+..+.++ ..... .. .........+|++.......
T Consensus 75 ~~~~l~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (509)
T PRK12406 75 IAYILEDSGARVLIAHADLLH---------GLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP 145 (509)
T ss_pred HHHHHhccCCcEEEEccchhh---------hhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCc
Confidence 999999999999999875321 1111111111111 10000 00 00111233456655432211
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHH---HHHHhhchhcCCCCCCEEEEecccccccchHHhHHh
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSS 418 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 418 (727)
.....++++++++|||||||.||||+++|.+.. .........+++.+++++++..|+.|..+....+.+
T Consensus 146 --------~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~ 217 (509)
T PRK12406 146 --------YDGPPVPQPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRA 217 (509)
T ss_pred --------cCCCCCCCceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHH
Confidence 112346899999999999999999999876543 333334456788999999999999998887666678
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhCC
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW 496 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~ 496 (727)
+..|+++++.+ ..++..+++.++++++|++.++|+++..|+.... ....+++++|.+++||+++++++..++.+.+
T Consensus 218 ~~~g~~~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~- 295 (509)
T PRK12406 218 GRLGGVLVLQP-RFDPEELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWW- 295 (509)
T ss_pred HhhheEEEEcc-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHc-
Confidence 88999998876 4678899999999999999999999999987533 2345678999999999999999988888765
Q ss_pred CCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCcccccccccc
Q 004860 497 YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEE 576 (727)
Q Consensus 497 ~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~ 576 (727)
++.+++.||+||++.+.+..........+++|+|++++.++|+|+++++++.|+. ||+++.........++.+++.++
T Consensus 296 ~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~~~~y~~~~~~~~ 373 (509)
T PRK12406 296 GPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVDEDGRPLPQGEI--GEIYSRIAGNPDFTYHNKPEKRA 373 (509)
T ss_pred CCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEECCCCCCCCCCCc--eEEEEECCccccccccCCchhcc
Confidence 5789999999999875543332223345789999999999999999999999986 99998321111001111222333
Q ss_pred ccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEE
Q 004860 577 VYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVL 656 (727)
Q Consensus 577 ~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l 656 (727)
..+ ...||+|||+|++++||++++.||.||+||++|++|+|.|||+.|. .+|+|.+++|++.++...+ +.+
T Consensus 374 ~~~-------~~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~-~~~~v~~~~v~~~~~~~~~-~~~ 444 (509)
T PRK12406 374 EID-------RGGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLH-AVPGVHDCAVFGIPDAEFG-EAL 444 (509)
T ss_pred ccc-------CCCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHH-hCCCeeEEEEEeeeccccC-cee
Confidence 322 1239999999999999999999999999999999999999999996 8999999999999887767 889
Q ss_pred EEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhh
Q 004860 657 VIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 721 (727)
Q Consensus 657 ~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 721 (727)
++++++.++...+.++++ +.+++.|++|++|..++++++||+|++||++|+.|++.+....
T Consensus 445 ~~~v~~~~~~~~~~~~l~----~~l~~~l~~~~~P~~i~~~~~iP~t~~GK~~r~~L~~~~~~~~ 505 (509)
T PRK12406 445 MAVVEPQPGATLDEADIR----AQLKARLAGYKVPKHIEIMAELPREDSGKIFKRRLRDPYWANA 505 (509)
T ss_pred EEEEEECCCCCCCHHHHH----HHHHHhcccCCCCcEEEEeccCCCCCccchhHHHHHHHHHhhc
Confidence 999998765544545544 4577889999999999999999999999999999998876543
No 100
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.2e-60 Score=543.53 Aligned_cols=496 Identities=21% Similarity=0.252 Sum_probs=384.2
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+++|+++|+++.+. .+||+||.++++++|.+|.+ . +++||+|+++++|++++++++|||+++|++++|++
T Consensus 34 ~~~p~~~a~~~~~~--------~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~v~l~ 105 (560)
T PRK08974 34 ARYADQPAFINMGE--------VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIVVNVN 105 (560)
T ss_pred HhCCCCceEEECCc--------cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeccC
Confidence 68999999998665 89999999999999999985 7 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCC-------------------C
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIP-------------------L 325 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------------------~ 325 (727)
|.++.+++.+++++++++++++++... +....+........+++.......... .
T Consensus 106 ~~~~~~~~~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08974 106 PLYTPRELEHQLNDSGAKAIVIVSNFA------HTLEKVVFKTPVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYH 179 (560)
T ss_pred ccCCHHHHHHHHHhcCceEEEEecccc------HHHHHHhhhcCcceEEEecccccccccccccccchhhhccccccccc
Confidence 999999999999999999999986432 112222211111222211110000000 0
Q ss_pred CcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhc---CCCCCCEEEE
Q 004860 326 REQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCW 402 (727)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d~~l~ 402 (727)
.+...++.+....... .........++++++++|||||||.||||+++|+++...+......+ ....++.++.
T Consensus 180 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 255 (560)
T PRK08974 180 LPDAISFRSALHKGRR----MQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVT 255 (560)
T ss_pred CCCcccHHHHhhccCC----CCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEE
Confidence 0011122222221111 01111224578999999999999999999999999987655433222 2334567778
Q ss_pred ecccccccch-HHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecC
Q 004860 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGE 481 (727)
Q Consensus 403 ~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe 481 (727)
.+|+.|.++. ...+.++.+|+++++.....++..+++.++++++|++.++|++++.|.........+++++|.+++||+
T Consensus 256 ~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~ 335 (560)
T PRK08974 256 ALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGM 335 (560)
T ss_pred eCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCc
Confidence 8888887775 446677889999888765557788999999999999999999999998765555566789999999999
Q ss_pred CCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe--
Q 004860 482 TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-- 559 (727)
Q Consensus 482 ~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-- 559 (727)
++++.+..++.+.+ ++++++.||+||++..++.+........+++|.|++++.++|+|++++++|.|+. |||++.
T Consensus 336 ~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~g~ 412 (560)
T PRK08974 336 AVQQAVAERWVKLT-GQYLLEGYGLTECSPLVSVNPYDLDYYSGSIGLPVPSTEIKLVDDDGNEVPPGEP--GELWVKGP 412 (560)
T ss_pred cCCHHHHHHHHHHh-CCcEEeeecccccCceeeccCCCCcccCCccccCcCCCEEEEECCCCCCCCCCCc--eEEEEecC
Confidence 99999888887654 6889999999999876555443333445789999999999999999999999995 999993
Q ss_pred ---cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCC
Q 004860 560 ---PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADE 636 (727)
Q Consensus 560 ---~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p 636 (727)
.+|++ +++.++..|. . .||+|||+++++++|+++++||.||+||++|++|+|.+||++|. .||
T Consensus 413 ~~~~gy~~------~~~~~~~~~~-----~--g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~-~~~ 478 (560)
T PRK08974 413 QVMLGYWQ------RPEATDEVIK-----D--GWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVM-LHP 478 (560)
T ss_pred CcchhhcC------Chhhhhhhhh-----c--CCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHH-hCC
Confidence 34444 3334444442 1 29999999999999999999999999999999999999999995 999
Q ss_pred CceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHH
Q 004860 637 SILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQ 716 (727)
Q Consensus 637 ~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~ 716 (727)
+|.+++|++.++...+ +.++++++..+. ..+.++ +++++++.|++|++|..++++++||+|++||++|+.|++.
T Consensus 479 ~v~~~~v~~~~~~~~g-~~~~~~v~~~~~-~~~~~~----l~~~l~~~l~~~~~P~~~~~~~~lP~t~~GK~~r~~l~~~ 552 (560)
T PRK08974 479 KVLEVAAVGVPSEVSG-EAVKIFVVKKDP-SLTEEE----LITHCRRHLTGYKVPKLVEFRDELPKSNVGKILRRELRDE 552 (560)
T ss_pred CeeEEEEEeeecCCcc-eEEEEEEECCCC-CCCHHH----HHHHHHhhcccccCCcEEEEhhhCCCCCCCcEeHHHHHHH
Confidence 9999999999988777 788888776532 233333 4556778899999999999999999999999999999999
Q ss_pred Hhhhhcc
Q 004860 717 IKHELSV 723 (727)
Q Consensus 717 ~~~~~~~ 723 (727)
...+..+
T Consensus 553 ~~~~~~~ 559 (560)
T PRK08974 553 ARAKVDN 559 (560)
T ss_pred HHhhhcc
Confidence 8877654
No 101
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.6e-61 Score=553.26 Aligned_cols=492 Identities=15% Similarity=0.122 Sum_probs=370.0
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. .+.++++||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++
T Consensus 49 a~~~p~~~a~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~ 125 (614)
T PRK08180 49 AQEAPDRVFLAERGA---DGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALAAMYAGVPYAPVS 125 (614)
T ss_pred HHHCCCCceeeeccC---CCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeeec
Confidence 368999999987532 12345899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCC-----HHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhh--CCCcEEEEcCCCCCCCCCCCcCcccHHHHhc
Q 004860 265 DSFA-----AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGA--APLKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (727)
Q Consensus 265 p~~~-----~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 337 (727)
|.++ .+++.+++++++++++|+++... ....+... .....++.... . ......+|.++..
T Consensus 126 ~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~-------~~~~~~~~~~~~~~~i~~~~~-~-----~~~~~~~~~~~~~ 192 (614)
T PRK08180 126 PAYSLVSQDFGKLRHVLELLTPGLVFADDGAA-------FARALAAVVPADVEVVAVRGA-V-----PGRAATPFAALLA 192 (614)
T ss_pred cccccccCCHHHHHHHHhcCCCcEEEEcCHHH-------HHHHHhhhccCCceEEEecCC-C-----CCcccccHHHHhc
Confidence 9998 79999999999999999975310 00011110 11112222110 0 0011245666654
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCC--CCCEEEEecccccccch-HH
Q 004860 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLK--VGDVYCWPTNLGWVMGP-VI 414 (727)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~--~~d~~l~~~~~~~~~~~-~~ 414 (727)
.... ...........++++++|+|||||||.||||++||+++++.+......+++. .++++++++|++|.++. +.
T Consensus 193 ~~~~--~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~ 270 (614)
T PRK08180 193 TPPT--AAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNHN 270 (614)
T ss_pred cccc--cchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHHH
Confidence 3211 0001111234578999999999999999999999999988877766666653 56899999999999887 56
Q ss_pred hHHhhhcCcEEEEecCCCCh---hhHHHHHHHhCCCEEEechHHHHHHHhcCC----CCCCCccceeEEEeecCCCChhh
Q 004860 415 LFSSFLNGATLALYQGSPLE---RSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----LEGLDWTKIRSFASTGETSNVDD 487 (727)
Q Consensus 415 ~~~~l~~G~~lv~~~~~~~~---~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~----~~~~~l~~Lr~i~~gGe~l~~~~ 487 (727)
++.+|++|+++++.++.+++ ..+++.|+++++|+++++|+++..|++... ....++++||.+++||+++++++
T Consensus 271 ~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~lr~v~~gGa~l~~~~ 350 (614)
T PRK08180 271 LGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRLKLLFYAGAALSQDV 350 (614)
T ss_pred HHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccceeEEEEccCCCCHHH
Confidence 77899999999997654443 467888999999999999999999876421 12345789999999999999999
Q ss_pred HHHHHhh----CC-CCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE----
Q 004860 488 DLWLSSK----AW-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL---- 558 (727)
Q Consensus 488 ~~~~~~~----~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v---- 558 (727)
.+++.+. ++ ++++++.||+||++..++.... .....+++|+|++|++++|+|+++ .|||++
T Consensus 351 ~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~d~~~---------~GEi~vrg~~ 420 (614)
T PRK08180 351 WDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTG-PLSRAGNIGLPAPGCEVKLVPVGG---------KLEVRVKGPN 420 (614)
T ss_pred HHHHHHHHHhhcCCCceeeeeecccccCCceEeccc-ccCCCCcccCccCCcEEEEecCCC---------CcEEEEecCc
Confidence 8877753 22 3679999999999865443322 234567899999999999998632 289988
Q ss_pred -ecccCCCCccccccccccccccccccCCCceeeeeCceEEE----ecCceEEEEeecCCeeec-Cceeec--hHHHHHH
Q 004860 559 -FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR----TVGGYIIVQGRADDTMNL-GGIKTS--SVEIERV 630 (727)
Q Consensus 559 -~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~----~~dG~l~~~GR~dd~ik~-~G~ri~--~~eIE~~ 630 (727)
..||+++ ++.+++.|..+ .||+|||+|++ |+||+++|+||+||+||+ +|++|+ +.|||.+
T Consensus 421 v~~GY~~~------p~~t~~~~~~d------gw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~p~Eie~~ 488 (614)
T PRK08180 421 VTPGYWRA------PELTAEAFDEE------GYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVGPLRARAV 488 (614)
T ss_pred cchhhcCC------hhHhHhhcccC------CceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecchhhhHHHH
Confidence 3566653 34555566422 39999999999 468999999999999985 798766 7899999
Q ss_pred HhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC---------------CCChHHHHHHHHHHHHhhc----CCCccc
Q 004860 631 CDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF---------------TSQPDKLKMIFSKAIQSKL----NPLFKV 691 (727)
Q Consensus 631 l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~---------------~~~~~~l~~~l~~~l~~~L----~~~~~P 691 (727)
+. .||.|.+|+|++.++ +.+.|+|+++++. ..+.+++++++++.|.+.. +.+.+|
T Consensus 489 l~-~~p~V~~a~V~g~~~-----~~~~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~p 562 (614)
T PRK08180 489 SA-GAPLVQDVVITGHDR-----DEIGLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAFRERLARLNAQATGSSTRV 562 (614)
T ss_pred hh-cCchhheEEEEcCCC-----CceEEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHHHHHHHHHHhhccccHhhe
Confidence 85 899999999999875 4678898887541 1234567777666654322 223389
Q ss_pred ceEEEcCCCCCCC------CchhhHHHHHHHHhhhhcc
Q 004860 692 SLVKVVPEFPRTA------SNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 692 ~~i~~v~~lP~t~------~GKvdR~~L~~~~~~~~~~ 723 (727)
.++++++++|+|+ +||+.|+++.+.|++++++
T Consensus 563 ~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~ 600 (614)
T PRK08180 563 ARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEA 600 (614)
T ss_pred eEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHH
Confidence 9999999999775 5578999999999988875
No 102
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=7.7e-61 Score=550.55 Aligned_cols=506 Identities=19% Similarity=0.210 Sum_probs=373.8
Q ss_pred CCCCCCceEEEEec-CCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWRE-DRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~-~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++++||++|+.+.. ..+..+.+..+||+||.++++++|+.|.+. +++||+|+|+++|+++|++++|||+++|+++||+
T Consensus 52 ~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl 131 (660)
T PLN02430 52 VEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPL 131 (660)
T ss_pred HHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEe
Confidence 36899999997642 111223445689999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC--cEEEEcCCCCCCC---CCCCcCcccHHHHhcc
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL--KAIVLPAIGNDVG---IPLREQDLSWKDFLSS 338 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~ 338 (727)
++.++++++.+++++++++++++++.... ..........+. .++++........ ........+|++++..
T Consensus 132 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (660)
T PLN02430 132 YDTLGPGAVDYIVDHAEIDFVFVQDKKIK-----ELLEPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHM 206 (660)
T ss_pred ccCCCHHHHHHHHhccCCCEEEECHHHHH-----HHHhhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHh
Confidence 99999999999999999999999864210 001111111111 2222321110000 0001123467776654
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchh-----cCCCCCCEEEEecccccccchH
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-----IDLKVGDVYCWPTNLGWVMGPV 413 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~-----~~~~~~d~~l~~~~~~~~~~~~ 413 (727)
....+ .......++++++|+|||||||.||||++||++++..+...... .+++++|++++++|++|.++..
T Consensus 207 ~~~~~----~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~ 282 (660)
T PLN02430 207 GKENP----SETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRM 282 (660)
T ss_pred hccCC----CCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHH
Confidence 33211 11122357999999999999999999999999998876654221 2578899999999999998876
Q ss_pred HhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCC-----------------------------
Q 004860 414 ILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC----------------------------- 464 (727)
Q Consensus 414 ~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~----------------------------- 464 (727)
..+.++..|+++++..+ ++..+++.|++.++|++.++|.+++.+.+...
T Consensus 283 ~~~~~l~~G~~i~~~~~--~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (660)
T PLN02430 283 IEEYFFRKGASVGYYHG--DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGY 360 (660)
T ss_pred HHHHHHHcCCEEEEeCC--ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 55667889999988754 45789999999999999999999988764200
Q ss_pred ----CCC-CC----------c-cceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccc
Q 004860 465 ----LEG-LD----------W-TKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFS 528 (727)
Q Consensus 465 ----~~~-~~----------l-~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG 528 (727)
... .+ + ++||.+++||+++++++.++++ .++.+.+++.||+||+++.++...+......+++|
T Consensus 361 ~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~-~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG 439 (660)
T PLN02430 361 SHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLR-VTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVG 439 (660)
T ss_pred CCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHH-HhcCCCeeeecchhhhhhceEeeccccCCCCCCcc
Confidence 000 00 1 5899999999999999866654 44456899999999998755544333333468899
Q ss_pred cCCCCceEEEEC--CCC-CcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEe
Q 004860 529 TATMTAGLVILD--ECG-VPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRT 600 (727)
Q Consensus 529 ~p~~~~~~~vld--~~~-~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~ 600 (727)
+|++++++++.| +.+ .+++.|. .|||+| ..||++ +++.|++.|. .| ||+|||+|++|
T Consensus 440 ~p~~~~evki~d~~~~g~~~~~~~~--~GEi~vrg~~v~~GY~~------~~e~t~~~~~-----dG--w~~TGDig~~d 504 (660)
T PLN02430 440 APAVYNELRLEEVPEMGYDPLGEPP--RGEICVRGKCLFSGYYK------NPELTEEVMK-----DG--WFHTGDIGEIL 504 (660)
T ss_pred CCCCceEEEEEEcCCcCcccCCCCC--cceEEecCCCccccccC------ChHHhhhhhh-----cc--ceeccceEEEC
Confidence 999999999986 333 4455554 499998 346655 3445666662 12 99999999999
Q ss_pred cCceEEEEeecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC----------CC-
Q 004860 601 VGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF----------TS- 668 (727)
Q Consensus 601 ~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~----------~~- 668 (727)
+||+|+++||+||+||+ +|++|+|.+||++|. +||.|.+|+|++.. .+ +.++|+|++++.. ..
T Consensus 505 ~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~-~~p~V~~~~V~G~~---~~-~~~~A~vv~~~~~~~~~~~~~~~~~~ 579 (660)
T PLN02430 505 PNGVLKIIDRKKNLIKLSQGEYVALEYLENVYG-QNPIVEDIWVYGDS---FK-SMLVAVVVPNEENTNKWAKDNGFTGS 579 (660)
T ss_pred CCCcEEEEEcccccEEcCCCcEEchHHHHHHHh-cCCCeeEEEEEecC---Cc-ceEEEEEEcCHHHHHHHHHhCCCCCC
Confidence 99999999999999997 699999999999995 99999999999832 23 7899999986421 00
Q ss_pred -----ChHHHHHHHHHHH-----HhhcCCCcccceEEEcCC-C-----CCCCCchhhHHHHHHHHhhhhcc
Q 004860 669 -----QPDKLKMIFSKAI-----QSKLNPLFKVSLVKVVPE-F-----PRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 669 -----~~~~l~~~l~~~l-----~~~L~~~~~P~~i~~v~~-l-----P~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
+..++++.+.+.+ ++.|+.|.+++.|+++++ + .+||++|+.|+.+.+.|++.+++
T Consensus 580 ~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~~~~~~g~lT~t~K~~R~~i~~~y~~~i~~ 650 (660)
T PLN02430 580 FEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKPFDVERDLVTATLKKRRNNLLKYYQVEIDE 650 (660)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCCCCCcCCcCChhhhhhhHHHHHHHHHHHHH
Confidence 1123444444433 246999999999998764 3 49999999999999999888764
No 103
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-60 Score=533.18 Aligned_cols=479 Identities=20% Similarity=0.143 Sum_probs=378.2
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEee
Q 004860 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQ 287 (727)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~ 287 (727)
.+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++++++++++++++
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~~ 90 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIVS 90 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEEc
Confidence 999999999999999999999 9999999999999999999999999999999999999999999999999999999998
Q ss_pred cccccCCccccchHHHhhhCC--CcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCC
Q 004860 288 DFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSS 365 (727)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TS 365 (727)
+... .......+..+ ...+.+... . ......|.+....... ......++.++++|||
T Consensus 91 ~~~~------~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~--------~~~~~~~~~a~i~~TS 149 (502)
T PRK08276 91 AALA------DTAAELAAELPAGVPLLLVVAG-P------VPGFRSYEEALAAQPD--------TPIADETAGADMLYSS 149 (502)
T ss_pred cchh------hHHHHHhhhccccccEEEEeCC-C------CCccccHHHHHhcCCC--------CCCCCCCcceEEEECC
Confidence 7543 11112222222 122222111 0 0122345544332111 1112446789999999
Q ss_pred CCCCCCCeEEecChHHHHH------HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHH
Q 004860 366 GTTGEPKAIPWTQLSSIRC------TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGK 439 (727)
Q Consensus 366 GSTG~PKgV~~th~~l~~~------~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~ 439 (727)
||||.||||+++|.++... .......+....++++++..|+.|..++...+.++..|+++++.+ ..++..+++
T Consensus 150 GtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~ 228 (502)
T PRK08276 150 GTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVME-KFDAEEALA 228 (502)
T ss_pred CCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcC-CCCHHHHHH
Confidence 9999999999998775422 122222233457889999999999988876778999999998876 467889999
Q ss_pred HHHHhCCCEEEechHHHHHHHhcCC--CCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCC
Q 004860 440 FVQDAGVTVLGTVPSLVKAWRNTNC--LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGS 517 (727)
Q Consensus 440 ~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~ 517 (727)
.++++++|++.++|+++..++.... ....+++++|.+++||++++.++.+++.+.+ +..+++.||+||++.++....
T Consensus 229 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~ 307 (502)
T PRK08276 229 LIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWW-GPIIHEYYASSEGGGVTVITS 307 (502)
T ss_pred HHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHh-CcHhhhhcccccccceeEecC
Confidence 9999999999999999999987643 2345688999999999999999999888766 567999999999987444333
Q ss_pred CCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCccccccccccccccccccCCCceeeeeCceE
Q 004860 518 LLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDII 597 (727)
Q Consensus 518 ~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~ 597 (727)
.......+++|+|+ +..++|+|+++++++.|+. ||+++..+... ..++.+++.+...|.++ .||+|||+|
T Consensus 308 ~~~~~~~~~~G~~~-~~~~~i~d~~~~~~~~g~~--Gel~v~~~~~~-~gy~~~~~~~~~~~~~~------~~~~TGD~~ 377 (502)
T PRK08276 308 EDWLAHPGSVGKAV-LGEVRILDEDGNELPPGEI--GTVYFEMDGYP-FEYHNDPEKTAAARNPH------GWVTVGDVG 377 (502)
T ss_pred ccccccCCCcceec-ccEEEEECCCCCCCcCCCc--eEEEEECCCcc-chhcCCHHHHHHHhcCC------CceeecceE
Confidence 22233456899999 8899999999999999985 99999522221 11222333455455432 399999999
Q ss_pred EEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHH
Q 004860 598 KRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIF 677 (727)
Q Consensus 598 ~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l 677 (727)
++++||.+++.||+|++||++|.+|++.|||.+|+ ++|+|.+++|++..++..+ +.++++|+++++...+ +.+.+.+
T Consensus 378 ~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~i 454 (502)
T PRK08276 378 YLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLV-THPKVADVAVFGVPDEEMG-ERVKAVVQPADGADAG-DALAAEL 454 (502)
T ss_pred EEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHH-hCCCcceEEEEeCCCcccC-ceEEEEEEECCCCCCC-hhhHHHH
Confidence 99999999999999999999999999999999996 8999999999999888777 8999999998764433 4455667
Q ss_pred HHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhcc
Q 004860 678 SKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 678 ~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
++.++++|++|++|..++++++||+|+|||++|+.|++.+..+.++
T Consensus 455 ~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~~~~ 500 (502)
T PRK08276 455 IAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEGRQR 500 (502)
T ss_pred HHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhhhhh
Confidence 7789999999999999999999999999999999999998776554
No 104
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-60 Score=529.72 Aligned_cols=439 Identities=17% Similarity=0.176 Sum_probs=361.1
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. .+||+||.++++++|+.|.+. +++||+|+++++|+++++++++||+++|++++|++
T Consensus 13 a~~~~~~~a~~~~~~--------~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~ 84 (458)
T PRK09029 13 AQVRPQAIALRLNDE--------VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLN 84 (458)
T ss_pred HHhCCCceeeecCCc--------ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecC
Confidence 368899999998766 899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
|..+.+++..++++++++++++++.... .. .+ . ...+. . ..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~----~~---~~----~--------------------~~~~~----~-~~--- 125 (458)
T PRK09029 85 PQLPQPLLEELLPSLTLDFALVLEGENT----FS---AL----T--------------------SLHLQ----L-VE--- 125 (458)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcCcccc----hh---hc----c--------------------ccccc----c-cc---
Confidence 9999999999999999999998764310 00 00 0 00000 0 00
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcE
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (727)
........++++++++|||||||.||||+++|++++..+......+++.++|+++...|+.|.+++..++.+|..|++
T Consensus 126 --~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~ 203 (458)
T PRK09029 126 --GAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGAT 203 (458)
T ss_pred --ccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCce
Confidence 011123457899999999999999999999999999988877778899999999999999999998767788999999
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
+++.+. ..+++.+ .++|.+..+|+++..|...... ..++|.+++||+++++.+.+++... ++++++.|
T Consensus 204 v~~~~~----~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----~~~l~~i~~gG~~~~~~~~~~~~~~--g~~~~~~Y 271 (458)
T PRK09029 204 LVVRDK----QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----PLSLKAVLLGGAAIPVELTEQAEQQ--GIRCWCGY 271 (458)
T ss_pred EEeCCh----HHHHHHH--hhceeeecChHHHHHHHhcccc----CCcceEEEECCCCCCHHHHHHHHHc--CCcEeccc
Confidence 998764 4566777 4899999999999998875432 3479999999999999988877654 68899999
Q ss_pred cccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccc
Q 004860 505 GGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYF 579 (727)
Q Consensus 505 G~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f 579 (727)
|+||++...+.... ....++|+|++++.++|+| |||++ ..||++.+. .+..
T Consensus 272 G~tE~~~~~~~~~~---~~~~~~G~~~~~~~~~i~~-------------gel~v~g~~~~~gY~~~~~------~~~~-- 327 (458)
T PRK09029 272 GLTEMASTVCAKRA---DGLAGVGSPLPGREVKLVD-------------GEIWLRGASLALGYWRQGQ------LVPL-- 327 (458)
T ss_pred cccccCcceeccCC---CCCCCCCCCCCCCEEEEeC-------------CEEEEecCceeeeeecCcc------cccc--
Confidence 99999864332221 1234699999999999986 45555 566665332 2211
Q ss_pred cccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEE
Q 004860 580 RGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIF 659 (727)
Q Consensus 580 ~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~ 659 (727)
..+..||+|||+|+++ ||+++|.||+||+||++|++|+|.|||++|. .||+|.+++|++.+++..+ +.++++
T Consensus 328 -----~~~~~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~a~ 399 (458)
T PRK09029 328 -----VNDEGWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVIN-QHPLVQQVFVVPVADAEFG-QRPVAV 399 (458)
T ss_pred -----ccCCCccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHh-cCCCcceEEEEccCCcccC-ceEEEE
Confidence 1234599999999999 9999999999999999999999999999995 9999999999999998888 899999
Q ss_pred EEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhcc
Q 004860 660 VVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 660 vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
|+...+ .+.++ |+++++++|++|++|..+++++++|+|++||++|+.|++++.+..++
T Consensus 400 v~~~~~--~~~~~----l~~~~~~~l~~~~~P~~~~~~~~~p~t~~gKi~r~~L~~~~~~~~~~ 457 (458)
T PRK09029 400 VESDSE--AAVVN----LAEWLQDKLARFQQPVAYYLLPPELKNGGIKISRQALKEWVAQQLGN 457 (458)
T ss_pred EEcCcc--cCHHH----HHHHHHhhchhccCCeEEEEecccccCcCCCcCHHHHHHHHHhccCC
Confidence 987632 33344 45567788999999999999999999999999999999999887654
No 105
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-59 Score=533.95 Aligned_cols=497 Identities=21% Similarity=0.221 Sum_probs=375.8
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+.+|+++|+.+.+. .+||+||.++++++|++|.+. +++||+|+|+++|++++++++|||+++|++++|++|
T Consensus 29 ~~~~~~~a~~~~~~--------~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~~~vpl~~ 100 (545)
T PRK08162 29 EVYPDRPAVIHGDR--------RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGVPMAGAVLNTLNT 100 (545)
T ss_pred HHCCCCeEEEECCe--------EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCcEEecccc
Confidence 68999999998766 899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPR 344 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (727)
.++.+++.+++++++++.+++++... +.........+. +.+++.............+..++.+++.....
T Consensus 101 ~~~~~~~~~~l~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 171 (545)
T PRK08162 101 RLDAASIAFMLRHGEAKVLIVDTEFA------EVAREALALLPGPKPLVIDVDDPEYPGGRFIGALDYEAFLASGDP--- 171 (545)
T ss_pred ccChHHHHHHHHhCCCeEEEEccchh------hHHHHHHhhCCCCceEEEecCccccccCCCcccccHHHHhccCCc---
Confidence 99999999999999999999987532 111121122222 23333322111000001123345555543221
Q ss_pred CCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcE
Q 004860 345 PNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT 424 (727)
Q Consensus 345 ~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~ 424 (727)
..........+++++|+|||||||.||||+++|+++..........+++..++++++..|+.|..+....+...+.|++
T Consensus 172 -~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~~~~~~~~~~g~ 250 (545)
T PRK08162 172 -DFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWCFPWTVAARAGT 250 (545)
T ss_pred -cccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHHHHHHHHHHccE
Confidence 0111112234679999999999999999999999876666555556778889999999999998887544444445666
Q ss_pred EEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccc
Q 004860 425 LALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESC 504 (727)
Q Consensus 425 lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~Y 504 (727)
.++.. ..++..+++.|+++++|++.++|++++.|++........+.+++.++++|+.+++...+++... ++++++.|
T Consensus 251 ~~~~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~Y 327 (545)
T PRK08162 251 NVCLR-KVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKMEEI--GFDLTHVY 327 (545)
T ss_pred EEEeC-CCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHHHHh--CCceeecc
Confidence 55554 4678999999999999999999999999987654333345566777899999998888777653 68899999
Q ss_pred cccccccccccCCCC------C----CccccccccCCC-CceEEEECC-CCCcCCCCCCeeeeEEEe-----cccCCCCc
Q 004860 505 GGTELSSAYIQGSLL------Q----PQAFGAFSTATM-TAGLVILDE-CGVPYPDDQPCVGEVGLF-----PLYLGASD 567 (727)
Q Consensus 505 G~TE~~~~~~~~~~~------~----~~~~~~iG~p~~-~~~~~vld~-~~~~~p~G~~giGel~v~-----~~y~~~~~ 567 (727)
|+||+++.+..+... . .....+.|.+.+ +..++|+|+ +++++|.+...+|||++. .||++
T Consensus 328 G~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~--- 404 (545)
T PRK08162 328 GLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLK--- 404 (545)
T ss_pred cccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcC---
Confidence 999986443332110 0 011234566655 346889994 688887632125999983 45555
Q ss_pred cccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeec
Q 004860 568 RLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVS 647 (727)
Q Consensus 568 ~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~ 647 (727)
+++.+...|.. .||+|||+|++++||+++++||.||+||++|++|+|.|||++|. .||+|.+++|++.+
T Consensus 405 ---~~~~~~~~~~~-------g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~ 473 (545)
T PRK08162 405 ---NPKATEEAFAG-------GWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLY-RHPAVLVAAVVAKP 473 (545)
T ss_pred ---ChhhhHHHhhC-------CCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHH-hCCcccEEEEEeee
Confidence 33455555531 29999999999999999999999999999999999999999995 99999999999998
Q ss_pred CCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhccc
Q 004860 648 PAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSVR 724 (727)
Q Consensus 648 ~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~~ 724 (727)
++..+ +.++++++++++...+.+++ ++.+++.|++|++|..+++ ++||+|+|||++|+.|++++....+++
T Consensus 474 ~~~~~-~~~~~~v~~~~~~~~~~~~l----~~~~~~~l~~~~~P~~~~~-~~iP~t~~gK~~r~~l~~~~~~l~~~~ 544 (545)
T PRK08162 474 DPKWG-EVPCAFVELKDGASATEEEI----IAHCREHLAGFKVPKAVVF-GELPKTSTGKIQKFVLREQAKSLKAID 544 (545)
T ss_pred ccccC-ceEEEEEEeCCCCCCCHHHH----HHHHHHhcccccCCcEEEe-cccCCCCCcCCcHHHHHHHHhhhhhhc
Confidence 87777 89999999887655554544 4457778999999998875 689999999999999999877665543
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=6.7e-60 Score=579.89 Aligned_cols=486 Identities=18% Similarity=0.188 Sum_probs=376.5
Q ss_pred CCC-CCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKE-DNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~-pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
+++ |+++|+.+.+. +++||+||+++++++|+.|++-+++||+|+++++|+++++++++||+++|++++|+||
T Consensus 642 ~~~~~~~~ai~~~~~-------~~~Ty~el~~~~~~lA~~L~~g~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~~ 714 (1140)
T PRK06814 642 KIHGFKKLAVEDPVN-------GPLTYRKLLTGAFVLGRKLKKNTPPGENVGVMLPNANGAAVTFFALQSAGRVPAMINF 714 (1140)
T ss_pred HHcCCCCeEeECCCC-------CccCHHHHHHHHHHHHHHHHhcCCCCCeEEEEcCCchHHHHHHHHHHHCCCEEEEcCC
Confidence 455 46788876332 2899999999999999999633999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCC--CcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCC
Q 004860 266 SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAP--LKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHP 343 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (727)
.++.+++.+++++++++++++++......+. ....+..+ ..++.++..... . .....+.+.......
T Consensus 715 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~--~---~~~~~~~~~~~~~~~-- 783 (1140)
T PRK06814 715 SAGIANILSACKAAQVKTVLTSRAFIEKARL----GPLIEALEFGIRIIYLEDVRAQ--I---GLADKIKGLLAGRFP-- 783 (1140)
T ss_pred CCCHHHHHHHHHHcCCCEEEecHHHHhhhcc----hhHHHHhccCceEEEehHhhcc--C---ChHHHHHHHhhccCC--
Confidence 9999999999999999999998754321111 11111111 122222211000 0 000011111111110
Q ss_pred CCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcC
Q 004860 344 RPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNG 422 (727)
Q Consensus 344 ~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G 422 (727)
........++|+++++|||||||.||||+++|+++.+.+......++++++|++++..|+.|..+. +.++.++..|
T Consensus 784 ---~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G 860 (1140)
T PRK06814 784 ---LVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSG 860 (1140)
T ss_pred ---ccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHHHHHHHHcC
Confidence 001113467999999999999999999999999999888887788899999999999999999988 6788999999
Q ss_pred cEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccc
Q 004860 423 ATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIE 502 (727)
Q Consensus 423 ~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n 502 (727)
+++++.+...+...+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||++++++.+++.+.+ +++++|
T Consensus 861 ~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~--~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~-~~~~~~ 937 (1140)
T PRK06814 861 VKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA--HPYDFRSLRYVFAGAEKVKEETRQTWMEKF-GIRILE 937 (1140)
T ss_pred CEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc--ccccccceeEEEEcCCcCCHHHHHHHHHHh-CCcEEe
Confidence 99999875556677889999999999999999999987653 345688999999999999999988887765 678999
Q ss_pred cccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCccccccccccc
Q 004860 503 SCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEV 577 (727)
Q Consensus 503 ~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~~~ 577 (727)
.||+||++..++.... .....+++|+|++++++++.+..+ .|+. |||++. .||++. +. ..
T Consensus 938 ~YG~TE~~~~~~~~~~-~~~~~~~vG~p~~g~~~~~~~~~~----~~~~--Gel~v~g~~~~~gY~~~-------~~-~~ 1002 (1140)
T PRK06814 938 GYGVTETAPVIALNTP-MHNKAGTVGRLLPGIEYRLEPVPG----IDEG--GRLFVRGPNVMLGYLRA-------EN-PG 1002 (1140)
T ss_pred ccccccccceEEecCC-CCCCCCcCCccCCCCeEEEeecCC----CCCc--eEEEEeCCCcchhhcCC-------CC-CC
Confidence 9999999875544332 224457899999999999987543 2453 999983 444432 11 11
Q ss_pred cccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 578 YFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 578 ~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
.+. + .+++||+|||+|++|+||+++++||.||+||++|+||+|.|||++|. +||.|.+++|++.+++..+ +.++
T Consensus 1003 ~~~--~--~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~-~~~~v~~~~vv~~~~~~~g-~~~~ 1076 (1140)
T PRK06814 1003 VLE--P--PADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAA-ELWPDALHAAVSIPDARKG-ERII 1076 (1140)
T ss_pred ccc--c--CCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHH-hcCCcccEEEEEcccCCCC-ceEE
Confidence 111 1 13349999999999999999999999999999999999999999995 8999999999999998887 7887
Q ss_pred EEEEecCCCCCChHHHHHHHHHHHHh-hcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhhccc
Q 004860 658 IFVVLKKGFTSQPDKLKMIFSKAIQS-KLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHELSVR 724 (727)
Q Consensus 658 a~vv~~~~~~~~~~~l~~~l~~~l~~-~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~~~~ 724 (727)
+++.. .+.+.+++.++ +++ .+++|++|..+++++++|+|+|||+||++|++++.+....+
T Consensus 1077 ~~~~~---~~~~~~~l~~~----~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~ 1137 (1140)
T PRK06814 1077 LLTTA---SDATRAAFLAH----AKAAGASELMVPAEIITIDEIPLLGTGKIDYVAVTKLAEEAAAKP 1137 (1140)
T ss_pred EEEcC---CCcCHHHHHHH----HHHcCCCcccCCcEEEEecCcCCCCCCCCcHHHHHHHHHHhhccc
Confidence 77542 23444555554 443 59999999999999999999999999999999988776544
No 107
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-59 Score=514.82 Aligned_cols=406 Identities=14% Similarity=0.127 Sum_probs=344.6
Q ss_pred EEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHH
Q 004860 194 AIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREI 272 (727)
Q Consensus 194 Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l 272 (727)
++++.++ ++||+||.++++++|+.|. . +++|++|+|+++|+++++++++||+++|++++|++|..+.+++
T Consensus 1 ~~~~~~~--------~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~ 71 (414)
T PRK08308 1 MLIVNDE--------EYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAA 71 (414)
T ss_pred CeEecCc--------eecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHH
Confidence 4667666 9999999999999999985 6 9999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCcc
Q 004860 273 ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVY 352 (727)
Q Consensus 273 ~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (727)
..++++++++++++++... . ... ...
T Consensus 72 ~~~~~~~~~~~~i~~~~~~------~---------------------------------~~~---------------~~~ 97 (414)
T PRK08308 72 IRMAKRAGCHGLLYGESDF------T---------------------------------KLE---------------AVN 97 (414)
T ss_pred HHHHHhCCCCEEEecCccc------c---------------------------------ccc---------------CCC
Confidence 9999999999999865210 0 000 001
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEEecCC
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGS 431 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~ 431 (727)
..+++++|++|||||||.||||+++|+++.+.+......+++..+|+++..+|+.|++++ ..++.+|..|+++++.+ .
T Consensus 98 ~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~ 176 (414)
T PRK08308 98 YLAEEPSLLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-N 176 (414)
T ss_pred CCCCCceEEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-C
Confidence 245789999999999999999999999999888877778889999999999999999987 56889999999999986 4
Q ss_pred CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccccccccc
Q 004860 432 PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSS 511 (727)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~ 511 (727)
.++..+++.++++++|++.++|+++..|.+.... ..+++.+++||++++++..+.+.+. ..+++|.||+||+++
T Consensus 177 ~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~----~~~l~~~~~~G~~l~~~~~~~~~~~--~~~~~~~YG~tE~~~ 250 (414)
T PRK08308 177 KNPKFALNILRNTPQHILYAVPLMLHILGRLLPG----TFQFHAVMTSGTPLPEAWFYKLRER--TTYMMQQYGCSEAGC 250 (414)
T ss_pred CCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCc----cccccEEEEccCCCCHHHHHHHHHh--CChhhhccCccccCC
Confidence 6788899999999999999999999999875422 1368899999999999988888765 468999999999986
Q ss_pred ccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCccccccccccccccccccCCCceee
Q 004860 512 AYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 591 (727)
Q Consensus 512 ~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~y 591 (727)
...... ....+++|+|++++++++.++. |++ ||+++..+ .+||
T Consensus 251 ~~~~~~---~~~~~~~G~p~~~~~~~~~~~~------~~~--gel~v~~~--------------------------~~~~ 293 (414)
T PRK08308 251 VSICPD---MKSHLDLGNPLPHVSVSAGSDE------NAP--EEIVVKMG--------------------------DKEI 293 (414)
T ss_pred eeecCC---CCCCCccCccCCCeEEEEecCC------CCC--ceEEEEcC--------------------------CceE
Confidence 433221 1234679999999999998643 343 89887421 1389
Q ss_pred eeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChH
Q 004860 592 RHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPD 671 (727)
Q Consensus 592 rTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~ 671 (727)
+|||+|++++||+++++||.||+||++|+||+|.|||++|. .+|+|.+|+|++.+++..+ +.++++++... ..+.+
T Consensus 294 ~TGDl~~~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~-~~~~v~~a~v~~~~~~~~~-~~~~~~v~~~~--~~~~~ 369 (414)
T PRK08308 294 FTKDLGYKSERGTLHFMGRMDDVINVSGLNVYPIEVEDVML-RLPGVQEAVVYRGKDPVAG-ERVKAKVISHE--EIDPV 369 (414)
T ss_pred ECCceEEECCCccEEEecccCCeEEECCEEECHHHHHHHHH-hCCCeeEEEEEeccCCCCC-ceEEEEEEeCC--CCCHH
Confidence 99999999999999999999999999999999999999995 8999999999999988777 88999988764 34545
Q ss_pred HHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 672 KLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 672 ~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
++++ .++++|++|++|..++++++||+|++||++|+.|+
T Consensus 370 ~l~~----~l~~~l~~~~~P~~i~~v~~iP~t~~GKi~r~~~~ 408 (414)
T PRK08308 370 QLRE----WCIQHLAPYQVPHEIESVTEIPKNANGKVSRKLLE 408 (414)
T ss_pred HHHH----HHHHhCccccCCcEEEEeccCCCCCCcCeehhhhh
Confidence 5544 57788999999999999999999999999999554
No 108
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-61 Score=555.98 Aligned_cols=553 Identities=20% Similarity=0.200 Sum_probs=433.7
Q ss_pred HHHHcCCCchhhHHHHHHHHHHHHh-hcCCChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCCC----ccc
Q 004860 12 DLMKVGLKLEEAEEFDKILKQVISC-SKGLDAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGPP----LYW 86 (727)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~a~~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~----~~~ 86 (727)
|+..++.......+|.+.++++.+. +.+++||++||+. +++.+.+.+..+ .++ |+++|++++...... ...
T Consensus 66 n~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~h~~~p~~~-l~~~~~~~~~~~-~~l--~~~~~~~~~~~~~~~~~~~~~~ 141 (642)
T COG1020 66 NTLPLRLDISGRVTFAELLARLRELALGALEHQDLPGEQ-LVERLGRERSLS-EPL--FDVVFVLQNGPTAGLKLPGLRV 141 (642)
T ss_pred eeeeeeeccCCCCCHHHHHHHHHHHHHHHhhccCCCHHH-HHHHHhhhccCC-CCc--eeeEEEecCccccccccccccc
Confidence 4556677777777777777777777 9999999999999 999999888887 777 999999987644331 111
Q ss_pred cC--ChhhhcccchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcceeEecCCeee--ecCCCCC
Q 004860 87 FP--SLDQSKLTNLGNALEIHGPKLLGRA-YKDPITSFRLFQKFTVEHPEAYWEIALKEISVVFREAPKCI--LDRTDKS 161 (727)
Q Consensus 87 ~~--~~~~~~~~~l~~~~~~~~~~~~~~~-y~~~~~~~~~~~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~~~~~~ 161 (727)
.. ......++|+.+.+.+. ++...+ |.+ ++|++.+++++..+|..++..+..+++.....+ +...++
T Consensus 142 ~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~ll~~~e~- 213 (642)
T COG1020 142 EELGIETPAAKLDLALAVVEG--GLRLSFDYAR-----ELFDAETIERELRHFLQLLAALADAPRTSLSALPLLLPSER- 213 (642)
T ss_pred ccccccCcccccceEEEEEeC--ceEEEEEeec-----ccCCHHHHHHHHHHHHHHHHHHHhCcccCcccCCCCCHHHH-
Confidence 11 11345677877776665 566666 888 999999999999999999999987777444432 333322
Q ss_pred CCCCCcCCCCcccHhhhhccC--CCCCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEE
Q 004860 162 KHGGTWLPGSVLNIAECCLLP--SNHRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAI 238 (727)
Q Consensus 162 ~~~~~w~~~~~~~~~~~~l~~--~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai 238 (727)
..|+......+...+++. ..++.++|+++|+++.+. .+||+||+.+++++|+.|.+. ++++++|++
T Consensus 214 ---~~~~~~~~~~~~~~~i~~~f~~~a~~~p~~~a~~~~~~--------~lty~el~~~a~~la~~l~~~g~~~~~~V~i 282 (642)
T COG1020 214 ---EVWNALAAPIPLRLTIHLLFEEQAATTPDAVALVRGGQ--------QLTYAELDARANRLARLLISLGVGPGETVAI 282 (642)
T ss_pred ---hhccccccCCCccchHHHHHHHHHHhCCCceeEecCCC--------cccHHHHHHHHHHHHHHHHHcCCCCCCeEEE
Confidence 346622222221223332 446789999999999866 899999999999999999999 999999999
Q ss_pred EcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCC
Q 004860 239 DMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG 318 (727)
Q Consensus 239 ~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 318 (727)
+++++++++++++|++|+|++|+|+||.+|.+|+.+++++++++.+++...........+.
T Consensus 283 ~~~rs~~~i~~~l~ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------- 343 (642)
T COG1020 283 LADRSLELVVALLAVLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVGLPG------------------- 343 (642)
T ss_pred EcCCCHHHHHHHHHHHhcCCeEecCCCCChHHHHHHHHhhcCccEEEeccccccccccCCc-------------------
Confidence 9999999999999999999999999999999999999999999999998533211000000
Q ss_pred CCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCC
Q 004860 319 NDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGD 398 (727)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d 398 (727)
+..+........ .........+++++|++|||||||+||||+++|+++++.+.+....+.++.+|
T Consensus 344 -----------~~~~~~~~~~~~----~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d 408 (642)
T COG1020 344 -----------LALDDALSEIPD----TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADD 408 (642)
T ss_pred -----------cccccccccCCc----cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCccc
Confidence 000000000000 00001234568999999999999999999999999999888888889999999
Q ss_pred EEEEecccccccchHHhHHhhhcCcEEEEecCC--CChhhHHHHHHHhCCCEEEechHHHHHHHhcCCC--CCCCcccee
Q 004860 399 VYCWPTNLGWVMGPVILFSSFLNGATLALYQGS--PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL--EGLDWTKIR 474 (727)
Q Consensus 399 ~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~--~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~--~~~~l~~Lr 474 (727)
+++..++++||.+.+++|.+++.|+++++.+.. .++..+.+.+.++++|++..+|+++..+...... .......+|
T Consensus 409 ~~l~~~s~~fD~~~~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr 488 (642)
T COG1020 409 RVLALASLSFDASVFEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLR 488 (642)
T ss_pred EEeecCCcccchhHHHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCccccc
Confidence 999999999999999999999999999998753 4778899999999999999999999999876221 112233599
Q ss_pred EEEeecCCCChhhHHHHHhhCC-CCcccccccccccccccccCCCCCCcc-ccccccCCCCceEEEECCCCCcCCCCCCe
Q 004860 475 SFASTGETSNVDDDLWLSSKAW-YNAIIESCGGTELSSAYIQGSLLQPQA-FGAFSTATMTAGLVILDECGVPYPDDQPC 552 (727)
Q Consensus 475 ~i~~gGe~l~~~~~~~~~~~~~-~~~l~n~YG~TE~~~~~~~~~~~~~~~-~~~iG~p~~~~~~~vld~~~~~~p~G~~g 552 (727)
.+++|||.++..+...+....+ ...+.|.||+||+++.+.......... ..++|+|++|.+++|+|+.++++|.|+.
T Consensus 489 ~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~~~piG~p~~n~~~~ild~~~~~~p~gv~- 567 (642)
T COG1020 489 QLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELESRVPIGRPVANTQLYILDQGLRPLPLGVP- 567 (642)
T ss_pred EEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCCCCCcceeeCCCeEEEECCCCCcCCCCCC-
Confidence 9999999999999887665544 467999999999776544333222111 4689999999999999999999999997
Q ss_pred eeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHH
Q 004860 553 VGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (727)
Q Consensus 553 iGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (727)
||+++ +.||+++ ++.|.++|..+ ++|+|||++|+++||.++++||.|+|||++|+||+++||
T Consensus 568 -gel~i~g~~~a~gy~~~------p~lt~~~f~~~------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~ei 634 (642)
T COG1020 568 -GELYIAGLGLALGYLNR------PDLTAERFIAL------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEI 634 (642)
T ss_pred -eeeEECCcchhhhhcCC------hhhhHHHhhhc------cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHH
Confidence 88887 5666664 45888888876 489999999999999999999999999999999999999
Q ss_pred HHHHhhcCC
Q 004860 628 ERVCDQADE 636 (727)
Q Consensus 628 E~~l~~~~p 636 (727)
|..+. ++|
T Consensus 635 e~~l~-~~~ 642 (642)
T COG1020 635 EAALA-EQP 642 (642)
T ss_pred HHHHh-cCC
Confidence 99995 665
No 109
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-59 Score=537.59 Aligned_cols=495 Identities=17% Similarity=0.147 Sum_probs=364.2
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++||++|+++.+. ..+.++.+||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|++++|++
T Consensus 59 a~~~pd~~a~~~~~~--~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~ 136 (624)
T PRK12582 59 AAEAPDRPWLAQREP--GHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTLAAMQAGVPAAPVS 136 (624)
T ss_pred HHHCCCchheecccC--CCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCeEeecc
Confidence 478999999987542 123456899999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCH-----HHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhccc
Q 004860 265 DSFAA-----REIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (727)
Q Consensus 265 p~~~~-----~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (727)
|.++. +++.+++++++++++|+++.... ......+ .......+++..... ......+.++....
T Consensus 137 p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~----~~~~~~~-~~~~~~~i~~~~~~~------~~~~~~~~~~~~~~ 205 (624)
T PRK12582 137 PAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPF----ARALAAL-DLLDVTVVHVTGPGE------GIASIAFADLAATP 205 (624)
T ss_pred CccccccCCHHHHHHHHHhcCCcEEEecCHHHH----HHHHHhh-hhcCceEEEEcCCCc------ccccccHHHHhhcC
Confidence 99985 89999999999999999763110 0000111 111122333221110 01223455554432
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCC---CCEEEEecccccccch-HHh
Q 004860 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV---GDVYCWPTNLGWVMGP-VIL 415 (727)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~---~d~~l~~~~~~~~~~~-~~~ 415 (727)
.. ...........++++++|+|||||||.||||+++|+++++........+.... +++++...|++|.++. ..+
T Consensus 206 ~~--~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~~~ 283 (624)
T PRK12582 206 PT--AAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMGGNANF 283 (624)
T ss_pred Cc--chhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHhHHHHH
Confidence 11 00001112345789999999999999999999999999887765544444444 5799999999999887 446
Q ss_pred HHhhhcCcEEEEecCCCChh---hHHHHHHHhCCCEEEechHHHHHHHhcCCCC----CCCccceeEEEeecCCCChhhH
Q 004860 416 FSSFLNGATLALYQGSPLER---SFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE----GLDWTKIRSFASTGETSNVDDD 488 (727)
Q Consensus 416 ~~~l~~G~~lv~~~~~~~~~---~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~----~~~l~~Lr~i~~gGe~l~~~~~ 488 (727)
+.++..|+++++.++.+++. .+++.++++++|++.++|++++.|.+..... ..++++||.+++||+++++++.
T Consensus 284 ~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~slr~i~~gGa~l~~~~~ 363 (624)
T PRK12582 284 NGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFKNLRLMAYGGATLSDDLY 363 (624)
T ss_pred HHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhhheeEEEecCCCCCHHHH
Confidence 67899999999976544433 4567788999999999999999887542211 2346899999999999999998
Q ss_pred HHHHhhC----C-CCcccccccccccccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----
Q 004860 489 LWLSSKA----W-YNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL----- 558 (727)
Q Consensus 489 ~~~~~~~----~-~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v----- 558 (727)
+++.+.. + ++++++.||+||++.++..... .....+++|+|++|++++|+ |.|+. |||+|
T Consensus 364 ~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~-~~~~~~svG~p~pg~~v~i~-------~~G~~--GEl~vrg~~v 433 (624)
T PRK12582 364 ERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHW-DTERVGLIGLPLPGVELKLA-------PVGDK--YEVRVKGPNV 433 (624)
T ss_pred HHHHHHHHhhcCCCceEEeccccccccceeecccC-CCCCCCCCCcCCCCcEEEEc-------cCCCc--eEEEEECCcc
Confidence 8887652 2 3579999999999865442222 22456789999999999985 45664 99998
Q ss_pred ecccCCCCccccccccccccccccccCCCceeeeeCceEEE-e---cCceEEEEeecCCeeec-CceeechHHHH--HHH
Q 004860 559 FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKR-T---VGGYIIVQGRADDTMNL-GGIKTSSVEIE--RVC 631 (727)
Q Consensus 559 ~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~-~---~dG~l~~~GR~dd~ik~-~G~ri~~~eIE--~~l 631 (727)
..||++ +++.+++.|.. +.||+|||+|++ | +||+++|+||+||+||+ +|++|+|.+|| .++
T Consensus 434 ~~GY~~------~p~~t~~~f~~------dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i~p~~iE~e~~l 501 (624)
T PRK12582 434 TPGYHK------DPELTAAAFDE------EGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWVSVGTLRPDAVA 501 (624)
T ss_pred cccccC------CccchhhhcCc------cCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEechHHHHHHHHH
Confidence 345655 34456666642 239999999998 4 56999999999999996 79999999885 566
Q ss_pred hhcCCCceeeEEEeecCCCCCceEEEEEEEecC----------CC----CCChHHHHHHHHHHH---HhhcCCCc-ccce
Q 004860 632 DQADESILETAAISVSPAGGGPEVLVIFVVLKK----------GF----TSQPDKLKMIFSKAI---QSKLNPLF-KVSL 693 (727)
Q Consensus 632 ~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~----------~~----~~~~~~l~~~l~~~l---~~~L~~~~-~P~~ 693 (727)
.+||.|.+|+|++.+++. +.+.|++.. +. ..+.+++.++|++.| ++.++.+. +|.+
T Consensus 502 -~~~p~V~~a~VvG~~~~~-----~g~lv~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~ 575 (624)
T PRK12582 502 -ACSPVIHDAVVAGQDRAF-----IGLLAWPNPAACRQLAGDPDAAPEDVVKHPAVLAILREGLSAHNAEAGGSSSRIAR 575 (624)
T ss_pred -hcCcchheEEEEcCCCCc-----EEEEEecCHHHHHHHHhcCCCCHHHHhcCHHHHHHHHHHHHHHHhhcCCChhheEE
Confidence 489999999999986643 344444321 11 013356666666655 45677777 9999
Q ss_pred EEEcCCCC------CCCCchhhHHHHHHHHhhhhcc
Q 004860 694 VKVVPEFP------RTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 694 i~~v~~lP------~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
+++++++| +|++||+.|+...+.|++++++
T Consensus 576 ~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ 611 (624)
T PRK12582 576 ALLMTEPPSIDAGEITDKGYINQRAVLERRAALVER 611 (624)
T ss_pred EEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHH
Confidence 99999887 5577788899999999988875
No 110
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-58 Score=527.31 Aligned_cols=464 Identities=19% Similarity=0.202 Sum_probs=357.1
Q ss_pred cceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCC-------HHHHHHHHHh
Q 004860 207 VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFA-------AREIATRLRV 278 (727)
Q Consensus 207 ~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~-------~~~l~~~l~~ 278 (727)
++.+||.||+++++++|++|++. +++||+|+++++|++++++++|||+++|++++|+++.++ .+++.+++++
T Consensus 47 ~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 47 EEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 45899999999999999999999 999999999999999999999999999999999987543 6899999999
Q ss_pred cCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCe
Q 004860 279 SKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAV 358 (727)
Q Consensus 279 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (727)
++++++|+++... +.......... ... ..+|.++...... ........++++
T Consensus 127 ~~~~~il~~~~~~------~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~-----~~~~~~~~~~~~ 178 (579)
T PRK09192 127 AQPAAIITPDELL------PWVNEATHGNP-LLH----------------VLSHAWFKALPEA-----DVALPRPTPDDI 178 (579)
T ss_pred cCCCEEEeChHHH------HHHHHhhcccc-ccc----------------eeehhhhcccCCC-----ccccCCCCCCCe
Confidence 9999999987532 11111110110 001 1123332221111 011123456899
Q ss_pred EEEEeCCCCCCCCCeEEecChHHHHHHHhhch-hcCCCCCCEEEEecccccccchHH-hHHhhhcCcEEEEecCC---CC
Q 004860 359 VNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA-HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALYQGS---PL 433 (727)
Q Consensus 359 a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~-~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~lv~~~~~---~~ 433 (727)
+||+|||||||.||||+++|++++..+..... .+++.++|++++..|+.|++++.. ++.++..|+++++.+.. .+
T Consensus 179 a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~ 258 (579)
T PRK09192 179 AYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARR 258 (579)
T ss_pred EEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHC
Confidence 99999999999999999999999988877766 788999999999999999999865 56778999999776521 25
Q ss_pred hhhHHHHHHHhCCCEEEechHHHHHHHhcCC---CCCCCccceeEEEeecCCCChhhHHHHHhhCC-----CCccccccc
Q 004860 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNC---LEGLDWTKIRSFASTGETSNVDDDLWLSSKAW-----YNAIIESCG 505 (727)
Q Consensus 434 ~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~---~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~-----~~~l~n~YG 505 (727)
+..+++.+.++++|++..+|.++..+..... ....+++++|.+++||+++++...+.+.+.+. ...+++.||
T Consensus 259 ~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~yG 338 (579)
T PRK09192 259 PLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMPSYG 338 (579)
T ss_pred HHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccCCHHHHHHHHHHHHhcCCChhhcccccc
Confidence 6788999999999988776666655543221 22356889999999999999998887776643 135899999
Q ss_pred ccccccccccCCCCC---------------------------CccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE
Q 004860 506 GTELSSAYIQGSLLQ---------------------------PQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL 558 (727)
Q Consensus 506 ~TE~~~~~~~~~~~~---------------------------~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v 558 (727)
+||++..++...... .....++|+|++++.++|+|+++++++.|+. |||++
T Consensus 339 ~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d~~~~~~~~g~~--Gel~i 416 (579)
T PRK09192 339 LAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRNEAGMPLPERVV--GHICV 416 (579)
T ss_pred cccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEECCCCCCCCCCCE--EEEEe
Confidence 999986544322110 0112478999999999999999999999984 99998
Q ss_pred -----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 559 -----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 559 -----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
..||++. ..+...|.. ..||+|||+|++ ++|+++|+||+||+||++|++|+|.|||++|.
T Consensus 417 ~g~~~~~gY~~~-------~~~~~~~~~------dgw~~TGDlg~~-~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~- 481 (579)
T PRK09192 417 RGPSLMSGYFRD-------EESQDVLAA------DGWLDTGDLGYL-LDGYLYITGRAKDLIIINGRNIWPQDIEWIAE- 481 (579)
T ss_pred cCCchhhhhcCC-------ccccccccC------CceeeccceeeE-ECCEEEEEeccccEEEECCCccCHHHHHHHHH-
Confidence 2445442 334444432 239999999999 99999999999999999999999999999995
Q ss_pred cCCCce--eeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcC--CCCCCCCchhh
Q 004860 634 ADESIL--ETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVP--EFPRTASNKLL 709 (727)
Q Consensus 634 ~~p~V~--~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~--~lP~t~~GKvd 709 (727)
.||+|. +|+|++.+++. + +.++++++..++...+.+++.+++++.+.. .+++|..+++++ +||+|++||++
T Consensus 482 ~~p~V~~~~~~v~~~~~~~-~-~~~~~~v~~~~~~~~~~~~l~~~~~~~l~~---~~~~~~~i~~~~~~~lP~t~~GKv~ 556 (579)
T PRK09192 482 QEPELRSGDAAAFSIAQEN-G-EKIVLLVQCRISDEERRGQLIHALAALVRS---EFGVEAAVELVPPHSLPRTSSGKLS 556 (579)
T ss_pred hcCCccCCcEEEEEeccCC-C-eeEEEEEEecCCChHHHHHHHHHHHHHHHH---HhCCCceEEEeCCCCcCCCCCcchh
Confidence 899998 88999988874 4 588888887765444556666666655432 467777777775 89999999999
Q ss_pred HHHHHHHHhhh
Q 004860 710 RRVLRDQIKHE 720 (727)
Q Consensus 710 R~~L~~~~~~~ 720 (727)
|++|++++...
T Consensus 557 R~~l~~~~~~~ 567 (579)
T PRK09192 557 RAKAKKRYLSG 567 (579)
T ss_pred HHHHHHHHHcC
Confidence 99999988653
No 111
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-58 Score=525.12 Aligned_cols=491 Identities=17% Similarity=0.180 Sum_probs=354.4
Q ss_pred CCCCCCceEEEEecCCC-CCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRC-DESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~-~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+..+||++|+++.+..+ ..+..+++||+||.++++++|++|.+.-++||+|+|+++|++++++++|||+++|++++|++
T Consensus 11 a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g~~gd~V~l~~~n~~~~~~~~lA~~~~G~v~vpl~ 90 (578)
T PRK05850 11 ASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHGSTGDRAVILAPQGLEYIVAFLGALQAGLIAVPLS 90 (578)
T ss_pred HhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccHHHHHHHHHHcCceEEecC
Confidence 36899999999754210 11223589999999999999999998833799999999999999999999999999999999
Q ss_pred C---CCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhC---C-CcEEEEcCCCCCCCCCCCcCcccHHHHhc
Q 004860 265 D---SFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAA---P-LKAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (727)
Q Consensus 265 p---~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 337 (727)
+ ..+.+++.++|++++++++++++.... ......... . ..++.+.. ..+ ..
T Consensus 91 ~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-------------~~~---~~ 148 (578)
T PRK05850 91 VPQGGAHDERVSAVLRDTSPSVVLTTSAVVD------DVTEYVAPQPGQSAPPVIEVDL-------------LDL---DS 148 (578)
T ss_pred CCCccchHHHHHHHHHhcCCCEEEEcHHHHH------HHHHHHhhcccccccceEeecc-------------ccc---cc
Confidence 7 457899999999999999999875431 111111100 0 01111100 000 00
Q ss_pred ccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchh-cC-----CCCCCEEEEecccccccc
Q 004860 338 SVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAH-ID-----LKVGDVYCWPTNLGWVMG 411 (727)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~-~~-----~~~~d~~l~~~~~~~~~~ 411 (727)
.. ........++++++|+|||||||.||||+++|+++++.+...... +. ...++++++..|+.|+.+
T Consensus 149 --~~-----~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g 221 (578)
T PRK05850 149 --PR-----GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMG 221 (578)
T ss_pred --CC-----ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCch
Confidence 00 001123356899999999999999999999999998776554332 22 356889999999999999
Q ss_pred h-HHhHHhhhcCcEEEEecCC---CChhhHHHHHHHhCCCEEEechHH-HHHHHhcC---CCCCCCccceeEEEeecCCC
Q 004860 412 P-VILFSSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSL-VKAWRNTN---CLEGLDWTKIRSFASTGETS 483 (727)
Q Consensus 412 ~-~~~~~~l~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~-l~~l~~~~---~~~~~~l~~Lr~i~~gGe~l 483 (727)
+ ..++.+++.|+++++.+.. .++..++++++++++++. .+|++ +..+.... .....+++++|.+++||+++
T Consensus 222 ~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~~~gg~~~ 300 (578)
T PRK05850 222 LVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTSDDDMAGLDLGGVLGIISGSERV 300 (578)
T ss_pred hHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcchhhhcCcchhhheeEEECcCCC
Confidence 7 4588999999999998642 267889999999999866 45554 44343321 11234678999999999999
Q ss_pred ChhhHHHHHhhCC-----CCcccccccccccccccccCCCCCC------------------------ccccccccCCCCc
Q 004860 484 NVDDDLWLSSKAW-----YNAIIESCGGTELSSAYIQGSLLQP------------------------QAFGAFSTATMTA 534 (727)
Q Consensus 484 ~~~~~~~~~~~~~-----~~~l~n~YG~TE~~~~~~~~~~~~~------------------------~~~~~iG~p~~~~ 534 (727)
++.+.+++.+.++ +..+++.||+||++..+.......+ ....++|.|. +.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~ 379 (578)
T PRK05850 301 HPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SP 379 (578)
T ss_pred CHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CC
Confidence 9999888777652 3468999999998754433221100 0012345554 57
Q ss_pred eEEEECC-CCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccc---ccc--CCCceeeeeCceEEEecCc
Q 004860 535 GLVILDE-CGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRG---MPM--YKGMCLRRHGDIIKRTVGG 603 (727)
Q Consensus 535 ~~~vld~-~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~---~p~--~~g~~~yrTGDl~~~~~dG 603 (727)
+++|+|+ +++++|.|+. |||++ +.||++ +++.+++.|.. +|. ..+..||+|||+|+++ ||
T Consensus 380 ~~~ivd~~~~~~~~~g~~--Gel~v~g~~~~~gY~~------~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~-~G 450 (578)
T PRK05850 380 TVRIVDPDTCIECPAGTV--GEIWVHGDNVAAGYWQ------KPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS-EG 450 (578)
T ss_pred EEEEEcCCCCcCCCCCCE--EEEEEecCcccccccC------ChhhhHHHhhcccccccccCCCCCeeeccceeeEE-CC
Confidence 8999994 5889999985 99999 346655 44466666642 121 1123599999999997 99
Q ss_pred eEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHH--HHHHHHHHH
Q 004860 604 YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDK--LKMIFSKAI 681 (727)
Q Consensus 604 ~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~--l~~~l~~~l 681 (727)
+++++||+||+||++|++|+|.|||++|. +||.+ +++|+++++. .+ +.++++|+++++...+.+. ....+++.+
T Consensus 451 ~l~~~GR~~d~i~~~G~~i~p~eIE~~l~-~~~~~-~~~v~~v~~~-~~-~~~~a~v~~~~~~~~~~~~~~~~~~l~~~v 526 (578)
T PRK05850 451 ELFIVGRIKDLLIVDGRNHYPDDIEATIQ-EITGG-RVAAISVPDD-GT-EKLVAIIELKKRGDSDEEAMDRLRTVKREV 526 (578)
T ss_pred EEEEEcccccEEEECCeecCHHHHHHHHH-HhcCC-cEEEEEecCC-Cc-eEEEEEEEeccccCcchhhhhhHHHHHHHH
Confidence 99999999999999999999999999996 89985 4778888876 55 8899999988765433222 233444444
Q ss_pred HhhcCC--CcccceEEEcC--CCCCCCCchhhHHHHHHHHhhh
Q 004860 682 QSKLNP--LFKVSLVKVVP--EFPRTASNKLLRRVLRDQIKHE 720 (727)
Q Consensus 682 ~~~L~~--~~~P~~i~~v~--~lP~t~~GKvdR~~L~~~~~~~ 720 (727)
...++. +..|..+++++ +||+|++||++|++|++++.+.
T Consensus 527 ~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~ 569 (578)
T PRK05850 527 TSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQD 569 (578)
T ss_pred HHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcC
Confidence 444432 23566666664 8999999999999999998654
No 112
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=5.8e-58 Score=505.66 Aligned_cols=430 Identities=21% Similarity=0.232 Sum_probs=347.7
Q ss_pred cHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeecc
Q 004860 211 TYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDF 289 (727)
Q Consensus 211 TY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (727)
||+||.++++++|+.|.+. +++||+|+|+++|++++++++|||+++|++++|+++.++.+++..++++++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 8999999999999999999 999999999999999999999999999999999999999999999999999999999875
Q ss_pred cccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCC
Q 004860 290 ILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTG 369 (727)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG 369 (727)
... +.+. ...+..+...... ..........+++++++|||||||
T Consensus 81 ~~~--~~~~------------------------------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGtTG 124 (436)
T TIGR01923 81 LEE--KDFQ------------------------------ADSLDRIEAAGRY----ETSLSASFNMDQIATLMFTSGTTG 124 (436)
T ss_pred ccc--ccee------------------------------ecchHhhhhcccc----cccccccCCcCceEEEEeCCCCCC
Confidence 310 0000 0011111111100 001112345688999999999999
Q ss_pred CCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEE
Q 004860 370 EPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (727)
Q Consensus 370 ~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (727)
.||+|+++|+++...+.+....++++++|++++..|+.|..++..++.++..|+++++.+.. ..+++.|+++++|++
T Consensus 125 ~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 125 KPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHI 201 (436)
T ss_pred CCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEE
Confidence 99999999999998888888889999999999999999998888789999999999998643 388999999999999
Q ss_pred EechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCcccccccc
Q 004860 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFST 529 (727)
Q Consensus 450 ~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~ 529 (727)
.++|+++..|.+.... .+++|.+++||++++++..+++... ++.++|.||+||++..++...........++|+
T Consensus 202 ~~~P~~l~~l~~~~~~----~~~l~~~~~~G~~~~~~~~~~~~~~--~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 275 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGH----NENLRKILLGGSAIPAPLIEEAQQY--GLPIYLSYGMTETCSQVTTATPEMLHARPDVGR 275 (436)
T ss_pred EeHHHHHHHHHhCcCC----CCceEEEEECCCCCCHHHHHHHHHh--CCceeeEecCCccchhccCcCccccccccCCCc
Confidence 9999999999886432 2689999999999999988877653 788999999999987555443322222234899
Q ss_pred CCCCceEEEECCCCCcCCCCCCeeeeEEEe-----cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCce
Q 004860 530 ATMTAGLVILDECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGY 604 (727)
Q Consensus 530 p~~~~~~~vld~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~ 604 (727)
|+++++++|.++.. ++ .||+++. .||++. .+.+...+ +..||+|||+|++++||+
T Consensus 276 ~~~~~~~~i~~~~~-----~~--~Gel~v~~~~~~~gy~~~------~~~~~~~~-------~~~~~~TGD~~~~~~dg~ 335 (436)
T TIGR01923 276 PLAGREIKIKVDNK-----EG--HGEIMVKGANLMKGYLYQ------GELTPAFE-------QQGWFNTGDIGELDGEGF 335 (436)
T ss_pred cCCCcEEEEEeCCC-----CC--ceEEEEECCccchhhCCC------hhhhhhhh-------cCCCeeccceEEEcCCCC
Confidence 99999999943322 13 3999983 344432 22222222 224999999999999999
Q ss_pred EEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhh
Q 004860 605 IIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSK 684 (727)
Q Consensus 605 l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~ 684 (727)
+++.||.||+||++|.+|++.+||++|. .+|.|.+++|++.++...+ ..++++++.+++ .+..++.+ .+++.
T Consensus 336 ~~~~GR~~d~i~~~G~~v~~~~iE~~l~-~~~~v~~~~v~~~~~~~~~-~~~~~~v~~~~~--~~~~~l~~----~l~~~ 407 (436)
T TIGR01923 336 LYVLGRRDDLIISGGENIYPEEIETVLY-QHPGIQEAVVVPKPDAEWG-QVPVAYIVSESD--ISQAKLIA----YLTEK 407 (436)
T ss_pred EEEeccccCeEEeCCEeeCHHHHHHHHH-hCCCeeEEEEeCCcchhcC-CeeEEEEEECCC--CCHHHHHH----HHHHh
Confidence 9999999999999999999999999995 8999999999998877666 788999988753 44445544 46778
Q ss_pred cCCCcccceEEEcCCCCCCCCchhhHHHH
Q 004860 685 LNPLFKVSLVKVVPEFPRTASNKLLRRVL 713 (727)
Q Consensus 685 L~~~~~P~~i~~v~~lP~t~~GKvdR~~L 713 (727)
|++|++|..++++++||+|++||++|++|
T Consensus 408 l~~~~~p~~i~~~~~iP~t~~GK~~r~~L 436 (436)
T TIGR01923 408 LAKYKVPIAFEKLDELPYNASGKILRNQL 436 (436)
T ss_pred hhCCCCCeEEEEecCCCCCCCCceecccC
Confidence 89999999999999999999999999875
No 113
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4e-57 Score=493.30 Aligned_cols=486 Identities=22% Similarity=0.245 Sum_probs=364.7
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++..+|+.+|+.+... +.+..+||+|+.+++.++|++|++. +.+||+|+|++.|+++|+++.+||+.+|++.||+
T Consensus 25 ~~~~~~~~~a~~~~~~----~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~~~~g~v~Vp~ 100 (613)
T COG1022 25 RVKDRPDGVALMYKEL----GGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAILALGAVSVPI 100 (613)
T ss_pred HhhcCCcceeEeeecC----CcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCeEEec
Confidence 3467888889987654 6778999999999999999999999 9779999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC---cEEEEcC-CCCC--CCCCC----CcCcccHH
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL---KAIVLPA-IGND--VGIPL----REQDLSWK 333 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~-~~~~--~~~~~----~~~~~~~~ 333 (727)
+++.+++++.++|+++++++++++.... .+....+....+. ....+.. .... ..... ..+...+
T Consensus 101 y~t~~~~~~~~iL~~se~~~i~~e~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 174 (613)
T COG1022 101 YSTSTPEQLAYILNESESKVIFVENQEL-----LDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPDEGISLF- 174 (613)
T ss_pred CCCCCHHHHHHHHhcCCceEEEecchHH-----HHHHHhhhccccchhhhhhhhhhhhhccchhhccccccccccchhh-
Confidence 9999999999999999999999987421 1222222221111 0000000 0000 00000 0001111
Q ss_pred HHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcC-CCCCCEEEEecccccccch
Q 004860 334 DFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHID-LKVGDVYCWPTNLGWVMGP 412 (727)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~-~~~~d~~l~~~~~~~~~~~ 412 (727)
...... .........++|+|.|+|||||||.|||||+||+|+++.+......+. ++++|++++++|++|.+..
T Consensus 175 -~~~~~~-----~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaHi~Er 248 (613)
T COG1022 175 -LIDSAG-----LEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAHIFER 248 (613)
T ss_pred -hhcccc-----cccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHHHHHH
Confidence 011111 111123557899999999999999999999999999999999999987 9999999999999999988
Q ss_pred HH-hHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhc--------CC-------------------
Q 004860 413 VI-LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT--------NC------------------- 464 (727)
Q Consensus 413 ~~-~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~--------~~------------------- 464 (727)
.. ....+..|+++.. ..++..+++.+.+.++|++..+|.+|+.+.+. ..
T Consensus 249 ~~~~~~~~~~g~~~~~---~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~~~ 325 (613)
T COG1022 249 AFEGGLALYGGVTVLF---KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKISR 325 (613)
T ss_pred HHHHHHHhhcceEEEe---cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHh
Confidence 54 4444555555444 34568999999999999999999999887532 00
Q ss_pred ----------------------CCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCc
Q 004860 465 ----------------------LEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQ 522 (727)
Q Consensus 465 ----------------------~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~ 522 (727)
.+... .++|++++||+++++++..+++.. +++++++||+|||+..++.+.+ ...
T Consensus 326 ~~~~~~~~~~~~~~d~LVf~Kir~~lG-gri~~~~sGGa~l~~~~~~f~~~l--Gi~i~eGYGlTEts~~~~v~~~-~~~ 401 (613)
T COG1022 326 ALLGGGPLSWLLVADRLVFRKIRDALG-GRIRYALSGGAPLSPELLHFFRSL--GIPILEGYGLTETSAVVSVNPP-DRF 401 (613)
T ss_pred hhcccCCcchhhhhhHHHHHHHHHHhC-CcEEEEEecCCcCCHHHHHHHHHc--CCCeEEEecccccccceEEccc-cCc
Confidence 00111 389999999999999999998876 6999999999999986655544 446
Q ss_pred cccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceE
Q 004860 523 AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDII 597 (727)
Q Consensus 523 ~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~ 597 (727)
..+++|.|+|+++++|.|+ |||.| +.||++ +++.|++.|..+. ||+|||+|
T Consensus 402 ~~gtvG~p~p~~evKI~d~------------GEilVRG~~Vm~GYyk------~pe~Taeaf~~DG------Wf~TGDlg 457 (613)
T COG1022 402 VLGTVGKPLPGIEVKIADD------------GEILVRGPNVMKGYYK------NPEATAEAFTEDG------WFRTGDLG 457 (613)
T ss_pred ccCCcCCcCCCceEEEccC------------ceEEEecchhcchhcC------ChHHHhhhccccC------CcccCcee
Confidence 6789999999999999994 89988 456655 5668888998644 99999999
Q ss_pred EEecCceEEEEeecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCC---------
Q 004860 598 KRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFT--------- 667 (727)
Q Consensus 598 ~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~--------- 667 (727)
.+|++|+|.++||++|.||. +|++|.|+.||+.+ +.+|.|.+++|++ .+ . ..+.|.|++..+.-
T Consensus 458 ~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l-~~~~~I~qi~vvg-~~---k-~~~~AlIvp~~~~l~~~a~~~~~ 531 (613)
T COG1022 458 ELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKL-AKSPLIEQICVVG-DD---K-KFLVALIVPDFDALEKWAESLNK 531 (613)
T ss_pred EEcCCCcEEEeecccceEECCCCcccChHHHHHHH-hcCCCeeEEEEEe-cC---C-cceEEEEeCCHHHHHHHHHhccc
Confidence 99999999999999999996 89999999999999 5999999999998 32 1 67999999865310
Q ss_pred ---CChH------HHHHHHHHHH---HhhcCCCcccceEEEcC-CC-----CCCCCchhhHHHHHHHHhhhhcc
Q 004860 668 ---SQPD------KLKMIFSKAI---QSKLNPLFKVSLVKVVP-EF-----PRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 668 ---~~~~------~l~~~l~~~l---~~~L~~~~~P~~i~~v~-~l-----P~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
.+.+ .+.+.+...+ ...+..+..+..+..++ ++ -.|++=|+.|+.+.+.+.+.++.
T Consensus 532 ~~~~~~~~l~~~~~l~~~~~~~i~~~~~~~~~~E~i~~~~~~~~~~t~~~~~~t~t~klkR~~i~~~~~~~i~~ 605 (613)
T COG1022 532 VISASREELARDPKLLKLILPRVNKGNKRLFGFEQIKKFVLLPKEFTPENGELTPTLKLKRHVILDRYKDEIEA 605 (613)
T ss_pred cccCCHHHHhhCHHHHHHHHHHHHHHhhcccchhhhheeeecccccccccCccccchhhhHHHHHHhhhhHHHH
Confidence 1111 2222222222 23334455555565553 33 38899999999999998877654
No 114
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-56 Score=505.94 Aligned_cols=473 Identities=18% Similarity=0.161 Sum_probs=355.5
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCC
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p 265 (727)
...|+.+|+...+. ...+||.||+++++++|++|.+. +++||+|+|+++|+++++++++||+++|++++|+++
T Consensus 13 ~~~~~~~~~~~~~~------~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~~l~~ 86 (545)
T PRK07768 13 RTSPRGMVTGEPDA------PVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLTMLHQ 86 (545)
T ss_pred hCCCcceEEecCCC------ceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCccccccCC
Confidence 56799998866543 24899999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCHHHH-------HHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcc
Q 004860 266 SFAAREI-------ATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSS 338 (727)
Q Consensus 266 ~~~~~~l-------~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (727)
..+.+++ ..+++.++++.+++++...... ..+ ... ......++++...
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~-~~~------------------~~~~~~~~~l~~~ 141 (545)
T PRK07768 87 PTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAA------PVL-EEK------------------GIRVLTVADLLAA 141 (545)
T ss_pred CCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhh------hhh-ccc------------------CCceeehhhhccc
Confidence 8886654 4467778999999977432110 000 000 0112334444432
Q ss_pred cCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCC-CEEEEecccccccchHH-hH
Q 004860 339 VDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVG-DVYCWPTNLGWVMGPVI-LF 416 (727)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~-d~~l~~~~~~~~~~~~~-~~ 416 (727)
... ......++++++++|||||||+||||+++|+++.+.+......+++.++ |++++..|+.|+.++.. ++
T Consensus 142 ~~~-------~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 214 (545)
T PRK07768 142 DPI-------DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLT 214 (545)
T ss_pred CCC-------CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHH
Confidence 111 1223457999999999999999999999999999888877777888876 89999999999999854 56
Q ss_pred HhhhcCcEEEEecCC---CChhhHHHHHHHhCCCEEEechHHHHHHHhcC----CCCCCCccceeEEEeecCCCChhhHH
Q 004860 417 SSFLNGATLALYQGS---PLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CLEGLDWTKIRSFASTGETSNVDDDL 489 (727)
Q Consensus 417 ~~l~~G~~lv~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~----~~~~~~l~~Lr~i~~gGe~l~~~~~~ 489 (727)
.++..|+++++.+.. .++..+.++++++++|++..+|.++..+.... .....++++||.+++||+++++...+
T Consensus 215 ~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~~~~~~ 294 (545)
T PRK07768 215 VPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPIDPADVE 294 (545)
T ss_pred HHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCCHHHHH
Confidence 789999999988642 25677889999999999988888877665421 11246788999999999999999888
Q ss_pred HHHhh---CC--CCcccccccccccccccccCCCCC-------------------------CccccccccCCCCceEEEE
Q 004860 490 WLSSK---AW--YNAIIESCGGTELSSAYIQGSLLQ-------------------------PQAFGAFSTATMTAGLVIL 539 (727)
Q Consensus 490 ~~~~~---~~--~~~l~n~YG~TE~~~~~~~~~~~~-------------------------~~~~~~iG~p~~~~~~~vl 539 (727)
++.+. ++ ...+++.||+||++..++...... ....+++|+|++++.++|+
T Consensus 295 ~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~ 374 (545)
T PRK07768 295 DLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVV 374 (545)
T ss_pred HHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEE
Confidence 77653 21 235999999999986543322110 1134579999999999999
Q ss_pred CCCCCcCCCCCCeeeeEEEe-----cccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCe
Q 004860 540 DECGVPYPDDQPCVGEVGLF-----PLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDT 614 (727)
Q Consensus 540 d~~~~~~p~G~~giGel~v~-----~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ 614 (727)
|+++++++.|+. |||++. .||++. ..+.. ... +..||+|||+|++++||+++++||+||+
T Consensus 375 ~~~~~~~~~g~~--Gel~v~~~~~~~gy~~~-------~~~~~----~~~--~~g~~~TGDl~~~~~~g~l~~~GR~~d~ 439 (545)
T PRK07768 375 DEDGQVLPPRGV--GVIELRGESVTPGYLTM-------DGFIP----AQD--ADGWLDTGDLGYLTEEGEVVVCGRVKDV 439 (545)
T ss_pred CCCCCCCCCCCE--EEEEEccCcccccccCC-------CCCcc----ccc--CCCeeeccceEEEecCCEEEEEccccce
Confidence 999999999985 999983 344431 11111 111 2339999999999999999999999999
Q ss_pred eecCceeechHHHHHHHhhcCCCceeeEEEeec--CCCCCceEEEEEEEecCCCCCChH---HHHHHHHHHHHhhcCCCc
Q 004860 615 MNLGGIKTSSVEIERVCDQADESILETAAISVS--PAGGGPEVLVIFVVLKKGFTSQPD---KLKMIFSKAIQSKLNPLF 689 (727)
Q Consensus 615 ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~--~~~~~~~~l~a~vv~~~~~~~~~~---~l~~~l~~~l~~~L~~~~ 689 (727)
||++|.+|+|.|||++|. .||+|.+++|++.. +...+ +.+++++..... .+.. ++.+++++.+...+. .
T Consensus 440 i~~~G~~v~~~eiE~~l~-~~~~v~~~~vv~~~~~~~~~~-~~~~~~v~~~~~--~~~~~~~~l~~~~~~~l~~~~~--~ 513 (545)
T PRK07768 440 IIMAGRNIYPTDIERAAA-RVEGVRPGNAVAVRLDAGHSR-EGFAVAVESNAF--EDPAEVRRIRHQVAHEVVAEVG--V 513 (545)
T ss_pred EEECCEecCHHHHHHHHH-hCcccccceEEEEEecCCCCc-eEEEEEEEeccc--ccHHHHHHHHHHHHHHHHHHhC--C
Confidence 999999999999999995 89999998777654 33333 455555544432 2222 334444443333322 5
Q ss_pred ccceEEEcC--CCCCCCCchhhHHHHHHHHh
Q 004860 690 KVSLVKVVP--EFPRTASNKLLRRVLRDQIK 718 (727)
Q Consensus 690 ~P~~i~~v~--~lP~t~~GKvdR~~L~~~~~ 718 (727)
.|..+.+++ .||+|++||++|+.|+++|.
T Consensus 514 ~p~~v~~v~~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 514 RPRNVVVLGPGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CccEEEEeCCCcCCCCCchhHHHHHHHHhcC
Confidence 677788876 89999999999999999875
No 115
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=9.2e-55 Score=466.24 Aligned_cols=504 Identities=17% Similarity=0.153 Sum_probs=384.9
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
+..+|+.+++-+.......+.+..+||.|..+++..+|..|+++ +++++.|||+.-|++||+++..||...|++.|||.
T Consensus 85 ~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplY 164 (691)
T KOG1256|consen 85 VEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISEMACYAYSLVNVPLY 164 (691)
T ss_pred hhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhHHHHHhcCCEEeecc
Confidence 47899999998765322357889999999999999999999999 99999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhh-----hCCCcEEEEcCCCCCC-CCCCC----cCcccHHH
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLG-----AAPLKAIVLPAIGNDV-GIPLR----EQDLSWKD 334 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~-~~~~~----~~~~~~~~ 334 (727)
..++++.+.++++++.+.+++++++ ..+..+.+ ..+....++...+... ..... ....+|++
T Consensus 165 dTlg~ea~~~Ii~~~e~~iv~vd~~--------~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~~~~~~~~~gv~v~S~~e 236 (691)
T KOG1256|consen 165 DTLGAEAVHYIINHAEISIVFVDNA--------KKAEKLLEIKENDSLPSLKAIIQLDEPSDELKEKAENNGVEVYSWDE 236 (691)
T ss_pred cCCCHHHHHHHHHhcceeEEEEeCH--------HHHHHHHhhcccccCccceeEEEecCCchhhhhhhhcCCeEEEEHHH
Confidence 9999999999999999999999964 12223332 1333333332222211 11111 23678999
Q ss_pred HhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHh---hch---hcCCCCCCEEEEeccccc
Q 004860 335 FLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWA---HIDLKVGDVYCWPTNLGW 408 (727)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~---~~~---~~~~~~~d~~l~~~~~~~ 408 (727)
+...+... ..... .+..|+|+|.|+|||||||.|||||+||+|++..+.. ... .......|++++++|++|
T Consensus 237 ~~~lG~~~--~~~~~-~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~lSyLPLAH 313 (691)
T KOG1256|consen 237 FEELGKKN--QRKPR-VPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYLSYLPLAH 313 (691)
T ss_pred HHhhcccc--cCCCC-CCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEEEeCcHHH
Confidence 99887642 11122 4668899999999999999999999999999885542 111 112334699999999999
Q ss_pred ccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhc-----------------------C--
Q 004860 409 VMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNT-----------------------N-- 463 (727)
Q Consensus 409 ~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~-----------------------~-- 463 (727)
++....-...+..|+++.+..+ |+..+.+.|++.++|++.++|.+|+.+.+. .
T Consensus 314 i~er~~~~~~~~~G~~IgF~~g--D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~~~k~~~ 391 (691)
T KOG1256|consen 314 IFERVVELYTFYIGAKIGFARG--DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAMAYKLEH 391 (691)
T ss_pred HHHHHHHHhHhhcccEEEEecC--ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 9998655566689999999874 556788889999999999999999887532 0
Q ss_pred -CCCCCC-------------------ccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCcc
Q 004860 464 -CLEGLD-------------------WTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQA 523 (727)
Q Consensus 464 -~~~~~~-------------------l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~ 523 (727)
...... -.++|.+++|++|+++++..+++..+ +++++++||+|||++..+...+... .
T Consensus 392 ~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~-g~~v~eGYGlTEts~g~~~~~~~d~-~ 469 (691)
T KOG1256|consen 392 RLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAAL-GCRVLEGYGLTETSAGTTLTLPGDN-V 469 (691)
T ss_pred HhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhc-CceeeecccccccCCceEeccCCCC-C
Confidence 000001 13789999999999999999888765 6999999999999955554444443 7
Q ss_pred ccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceE
Q 004860 524 FGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDII 597 (727)
Q Consensus 524 ~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~ 597 (727)
.+++|.|+|+++++++| ++.+.-+.|.. ||||| ..||+. +++.|++.|..+. |++|||+|
T Consensus 470 lgsvG~p~p~~~vKL~dvpe~ny~a~~~~--GEIcirG~~Vf~GYyK------~p~~T~e~ideDG------WLhTGDiG 535 (691)
T KOG1256|consen 470 LGSVGPPVPGNEVKLVDVPEMNYDADGSK--GEICVRGPNVFMGYYK------DPEKTAEAIDEDG------WLHTGDIG 535 (691)
T ss_pred CCCcCCcccCceEEEechHHhCcCcCCCc--ceEEEecchhceeccC------ChHHHhhhhcccc------ccccccce
Confidence 78999999999999998 45555556654 99998 456655 5668888887543 99999999
Q ss_pred EEecCceEEEEeecCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCC--------
Q 004860 598 KRTVGGYIIVQGRADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS-------- 668 (727)
Q Consensus 598 ~~~~dG~l~~~GR~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~-------- 668 (727)
+|+++|.|.++||.++.+|. .|++|.|..||++.. ..+-|.+.+|.+... +..|+|.|++++....
T Consensus 536 ~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~-~~~~V~qi~V~g~s~----~~~LvaiVvpd~e~~~~~a~~~~~ 610 (691)
T KOG1256|consen 536 EWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYK-RSLPVQQIFVLGDSL----RSFLVAIVVPDPEVLKSWAAKDGV 610 (691)
T ss_pred eECCCccEEEEecccceEEcCCCCccChHHHHHHHh-cCCceEEEEEECCcc----hhcEEEEEecChhhchhhHHHccC
Confidence 99999999999999999997 899999999999985 788898988877432 1689999999763211
Q ss_pred --ChHH------HHHHHHHHH-----HhhcCCCcccceEEEcC------CCCCCCCchhhHHHHHHHHhhhhcc
Q 004860 669 --QPDK------LKMIFSKAI-----QSKLNPLFKVSLVKVVP------EFPRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 669 --~~~~------l~~~l~~~l-----~~~L~~~~~P~~i~~v~------~lP~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
+.++ +++.+.+.+ +..|..+.....|.+.+ .=-+||+-|+.|..|.+.|++++++
T Consensus 611 ~~~~eelc~n~~~k~~vl~el~~~~~~~~l~~fe~vk~v~l~~~~FsienglltPTlK~KR~~l~~~yk~~Id~ 684 (691)
T KOG1256|consen 611 KGTFEELCRNLDVKEAVLSELVKVGKENGLKGFEQVKKVHLLPDPFSIENGLLTPTLKIKRPQLLKYYKKQIDE 684 (691)
T ss_pred chhHHHHhcChhhHHHHHHHHHHHHhhhhccChhhEeeEEEecccccccCCccchhhhhhhHHHHHHHHHHHHH
Confidence 1111 122222222 34566667776676643 2237899999999999999999875
No 116
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-52 Score=428.43 Aligned_cols=492 Identities=18% Similarity=0.178 Sum_probs=373.3
Q ss_pred CccceecHHHHHHHHHHHHHHHHhh-cCCCCE-EEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeE
Q 004860 205 SAVNLMTYKELREQVMLVANALDTM-FSKGDA-IAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAK 282 (727)
Q Consensus 205 ~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~-Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~ 282 (727)
+.+..+||.|+.+++.++|+.|.+. ++++++ |+|+++.+.+|+++++||++.+...|.+...+..+.+.+-|++++++
T Consensus 85 g~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~ 164 (678)
T KOG1180|consen 85 GDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETEST 164 (678)
T ss_pred cceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccce
Confidence 4667999999999999999999999 997776 99999999999999999999999999999999999999999999999
Q ss_pred EEEeecccccCCccccchHHHhhhCCCcEEEEcCCC--CC---CCCC----CCcCcccHHHHhcccCCCCCCCCCCCccC
Q 004860 283 GIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIG--ND---VGIP----LREQDLSWKDFLSSVDYHPRPNYYSPVYN 353 (727)
Q Consensus 283 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~---~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (727)
.|+|+.... +.+......+.....++..+. .. .... .....++++++++.+.... .++.+.
T Consensus 165 ~i~T~~~LL------~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~----~~~~~P 234 (678)
T KOG1180|consen 165 AIFTDSELL------PKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENE----IPPHPP 234 (678)
T ss_pred EEEeCHHHH------HHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCC----CCCCCC
Confidence 999998543 333333444444434433332 11 1111 1234567888888776522 233344
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhc-CCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~ 432 (727)
.|+|+|+|||||||||.|||||++|+|+++.+....... .+.+.|+++.++|++|.+-+..=+.++..|+++-..+...
T Consensus 235 ~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~T 314 (678)
T KOG1180|consen 235 KPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLT 314 (678)
T ss_pred CCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcce
Confidence 789999999999999999999999999999888776654 6899999999999999999865568899999886654322
Q ss_pred --Ch-----hhHHHHHHHhCCCEEEechHHHHHHHhc--------------------------CCCCCC-----------
Q 004860 433 --LE-----RSFGKFVQDAGVTVLGTVPSLVKAWRNT--------------------------NCLEGL----------- 468 (727)
Q Consensus 433 --~~-----~~l~~~i~~~~vt~l~~~P~~l~~l~~~--------------------------~~~~~~----------- 468 (727)
|. ..--..+...++|++.++|.++..+.+. ......
T Consensus 315 Ltdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFk 394 (678)
T KOG1180|consen 315 LTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFK 394 (678)
T ss_pred ecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHH
Confidence 11 1122346678999999999999877432 000000
Q ss_pred -----CccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccCCCCceEEEEC-CC
Q 004860 469 -----DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILD-EC 542 (727)
Q Consensus 469 -----~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld-~~ 542 (727)
---+||++++||++|+++..+++.-++ .|++..+||.||++...+...+.+ ...+.+|.|++.++++++| ++
T Consensus 395 KIr~~lGG~lR~~LsGGapLS~dtQrF~nic~-C~Pv~qGYGLTEtca~~tv~e~~d-~~~g~vG~pl~c~eiKLvdw~E 472 (678)
T KOG1180|consen 395 KIRALLGGNLRYILSGGAPLSPDTQRFMNICF-CCPVLQGYGLTETCAAATVLEPED-FSTGRVGAPLPCCEIKLVDWEE 472 (678)
T ss_pred HHHHHhCCceEEEEeCCCCCCHHHHHHHHHhc-cccccccccccchhcccEecChhh-cccccccCCccceEEEEEEhhh
Confidence 013799999999999999988887665 469999999999997666555443 3456899999999999999 33
Q ss_pred CCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeec
Q 004860 543 GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNL 617 (727)
Q Consensus 543 ~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~ 617 (727)
|.-.+.+.|--|||++ .+||++ |++.|++.|.. .+|.|||+|||+|+|.+||+|.++.|++|.||.
T Consensus 473 gGY~~~~~PPrGEI~i~G~~vt~gY~k------n~ekT~e~ft~---~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKl 543 (678)
T KOG1180|consen 473 GGYFAKNKPPRGEILIGGPNVTMGYYK------NEEKTKEDFTV---EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKL 543 (678)
T ss_pred cCccCCCCCCCceEEecCCccChhhhC------Chhhhhhhcee---cCCcEEEeccccceecCCCcEEEeechhhhhhh
Confidence 3322222111277777 567776 56688888875 568999999999999999999999999999997
Q ss_pred -CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC----------CC-ChHH------HH----H
Q 004860 618 -GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF----------TS-QPDK------LK----M 675 (727)
Q Consensus 618 -~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~----------~~-~~~~------l~----~ 675 (727)
+|+-|+++-||+++. ..|-|...+|.+-. .. ..++++||++++. .. +.++ +. +
T Consensus 544 q~GEYIsL~KvEa~l~-s~p~V~NICvyAd~--~~--s~~VaiVVPn~~~lt~lA~k~Gi~~~~~e~lc~d~k~~~~v~k 618 (678)
T KOG1180|consen 544 QNGEYISLGKVEAALR-SSPYVDNICVYADS--NK--SKPVAIVVPNQKHLTKLAEKAGISGSTWEELCEDKKVVKAVLK 618 (678)
T ss_pred cccceeehHHHHHHHh-cCcchhheEEeccc--cc--ceeEEEEcCCchHHHHHHHHcCCChhhHHHHhccHHHHHHHHH
Confidence 899999999999995 99999998887633 22 6899999998642 11 1111 22 2
Q ss_pred HHHHHH-HhhcCCCcccceEEEcCCCCCC-------CCchhhHHHHHHHHhhhhcc
Q 004860 676 IFSKAI-QSKLNPLFKVSLVKVVPEFPRT-------ASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 676 ~l~~~l-~~~L~~~~~P~~i~~v~~lP~t-------~~GKvdR~~L~~~~~~~~~~ 723 (727)
.|.+.- .++|..+.+|..|++.++ |.| ..=|+.|+.+...|.+++++
T Consensus 619 ~L~~~ak~~~L~~iEip~~I~l~~e-~WTPenGlvT~A~KLKRk~I~~~~k~ei~~ 673 (678)
T KOG1180|consen 619 ELIEAAKSQKLERIEIPAKIVLSPE-PWTPENGLVTAALKLKRKEILAAYKKEIDR 673 (678)
T ss_pred HHHHHHHhcccccccccceeEecCC-CcCCCccccHHHHHhhHHHHHHHHHHHHHH
Confidence 222222 578899999999888764 444 44599999999999988875
No 117
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=6.4e-52 Score=425.70 Aligned_cols=495 Identities=21% Similarity=0.214 Sum_probs=385.6
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
||+++||++|+++.+.. +.+||+|++++++++|+.|... ++.||.||++|+|+++++...||.+|+|++...|
T Consensus 86 ~vrr~p~k~aii~~~~~------~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlGv~tA~i 159 (649)
T KOG1179|consen 86 QVRRQPDKPAIIYEGPF------QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLGVITAFI 159 (649)
T ss_pred HHHhCCCccEEEEeCCC------ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhCceeeee
Confidence 56899999999998742 2899999999999999999999 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCC-cEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPL-KAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
+++...+.|.+.|.-++++.+|++.++.. ...++.+.+.. .+.++..... ..+++..++...++.....
T Consensus 160 NtNlR~~~LlHsi~~s~aralv~~~el~~------~~~e~~~~l~~~~i~~~~~~~~----~~~~g~~~L~~~l~~~~~~ 229 (649)
T KOG1179|consen 160 NTNLRGEPLLHSITVSGARALVVGPELLN------ALEEILPLLIKNGIHVFSLGPT----SVPDGIESLLAKLSAAPKH 229 (649)
T ss_pred ccccccchhhhhhhhcCceEEEECHHHHH------HHHhcchhhhhccceEEecCCC----CCCchHHHHHHhhcccccC
Confidence 99999999999999999999999986541 11111111111 1222221111 1112223333333333321
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhc
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLN 421 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~ 421 (727)
+.+ ........-.++++.||||||||.||..+++|.-+..........++++++|+++..+|+.|.++. ..+-+++..
T Consensus 230 ~vp-~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~ 308 (649)
T KOG1179|consen 230 PVP-VSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLH 308 (649)
T ss_pred CCC-cccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhc
Confidence 111 022234455789999999999999999999999888877767778999999999999999999876 678899999
Q ss_pred CcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccc
Q 004860 422 GATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAII 501 (727)
Q Consensus 422 G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~ 501 (727)
|+|+|+-. .++...||+.+.++++|++.-+--+.+.|+..+......-..+|..+--| +.++.++.+.++++-.+|.
T Consensus 309 GaT~Vlrk-KFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNG--LR~diW~~Fv~RFg~~~Ig 385 (649)
T KOG1179|consen 309 GATVVLRK-KFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNG--LRPDIWQQFVKRFGIIKIG 385 (649)
T ss_pred CceEEEec-ccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCC--CCchHHHHHHHHcCCCeEE
Confidence 99999975 67889999999999999999999999999998776655567888776444 7799999999999877899
Q ss_pred ccccccccccccccCCCCCCccccccccC------CCCceEE---------EECCCCC--cCCCCCCeeeeEEE------
Q 004860 502 ESCGGTELSSAYIQGSLLQPQAFGAFSTA------TMTAGLV---------ILDECGV--PYPDDQPCVGEVGL------ 558 (727)
Q Consensus 502 n~YG~TE~~~~~~~~~~~~~~~~~~iG~p------~~~~~~~---------vld~~~~--~~p~G~~giGel~v------ 558 (727)
+.||+||..+...... ...|.+|+- +--.++- |.|++|- +|++|++ |.++-
T Consensus 386 E~YgaTEgn~~~~N~d----~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEp--GlLv~~i~~k~ 459 (649)
T KOG1179|consen 386 EFYGATEGNSNLVNYD----GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEP--GLLVGKIVQKN 459 (649)
T ss_pred EEeccccCcceeeeec----CccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCC--ceEEEEeccCC
Confidence 9999999886443321 222333321 1111222 2333332 5788888 53321
Q ss_pred ----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhc
Q 004860 559 ----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQA 634 (727)
Q Consensus 559 ----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~ 634 (727)
..||.+ +.+.++.+...|-|.+|+-||.|||+-.+|+.|++||..|..|.+.-.|+||+..|||.+|. .
T Consensus 460 P~~~F~GY~g------~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~~l~-~ 532 (649)
T KOG1179|consen 460 PLRSFLGYAG------PKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVEDVLS-A 532 (649)
T ss_pred chhhhccccC------chhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHHHHh-h
Confidence 235554 25577778888889999999999999999999999999999999999999999999999995 8
Q ss_pred CCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHH
Q 004860 635 DESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLR 714 (727)
Q Consensus 635 ~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~ 714 (727)
..++.|+.|.++.-+...+..=.|.|+.++..+.+.+. +-+++++.||+|.+|..+.+.++|++|.+=|..+..|.
T Consensus 533 ~~~~~dv~VYGV~VP~~EGRaGMAaI~~~p~~~~d~~~----l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~ 608 (649)
T KOG1179|consen 533 LDFLQDVNVYGVTVPGYEGRAGMAAIVLDPTTEKDLEK----LYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQ 608 (649)
T ss_pred hccccceeEEEEecCCccCccceEEEEecCcccchHHH----HHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHH
Confidence 99999999999887655435666777777766655444 44568899999999999999999999999999999998
Q ss_pred HH
Q 004860 715 DQ 716 (727)
Q Consensus 715 ~~ 716 (727)
+.
T Consensus 609 ~e 610 (649)
T KOG1179|consen 609 KE 610 (649)
T ss_pred Hc
Confidence 75
No 118
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=4.7e-53 Score=463.70 Aligned_cols=390 Identities=25% Similarity=0.280 Sum_probs=300.1
Q ss_pred CCCCCCCceEEEE-ecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEee
Q 004860 185 HRRKEDNTVAIVW-REDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (727)
Q Consensus 185 ~a~~~pd~~Al~~-~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vp 262 (727)
+|+++||++|+++ .+. ++||+||+++++++|..|+++ +++||+|+|+++|+++++++++||+++|++++|
T Consensus 4 ~a~~~pd~~a~~~~~~~--------~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~ 75 (417)
T PF00501_consen 4 QAQRYPDRIALIDDEGR--------SLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVP 75 (417)
T ss_dssp HHHHSTTSEEEEETTTE--------EEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEE
T ss_pred HHhhCCCceEEEECCCE--------EEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeecccccccccccc
Confidence 4578999999999 555 999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHh---hhCCC--cEEEEcCCCCCCCCCCCcCcccHHHHhc
Q 004860 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVL---GAAPL--KAIVLPAIGNDVGIPLREQDLSWKDFLS 337 (727)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~---~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 337 (727)
++|.++.+++.++++.+++++||+ .+.. +... ...+. ..... ....+...... ....+..
T Consensus 76 l~~~~~~~~~~~~l~~~~~~~ii~-~~~~---d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 140 (417)
T PF00501_consen 76 LDPSLSEDELRHILRQSGPKVIIT-SEAV---DSEP-LKKLKSIFKQEDPSSSIIILDRDDLP----------KKEALKS 140 (417)
T ss_dssp EETTSSHHHHHHHHHHHTESEEEE-CHHH---SCHH-HHHHHHHHTTSTTTEEEEEESHSSCT----------TCHHHHH
T ss_pred cccccccccccccccccceeEEEE-eccc---cccc-cccchhhhcccccccccccccccccc----------ccccccc
Confidence 999999999999999999999997 2000 0111 12121 11111 23333211110 0000000
Q ss_pred ccCCCCCCCCCCCcc-CCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc--hhcCCCCCCEEEEecccccccch-H
Q 004860 338 SVDYHPRPNYYSPVY-NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW--AHIDLKVGDVYCWPTNLGWVMGP-V 413 (727)
Q Consensus 338 ~~~~~~~~~~~~~~~-~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~~~-~ 413 (727)
.... ...... ..++++++++|||||||.||+|.++|+++++.+.... ..++++ |++++++|++|.+++ .
T Consensus 141 ~~~~-----~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~ 213 (417)
T PF00501_consen 141 ASLS-----DEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLIS 213 (417)
T ss_dssp HHHC-----HCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHH
T ss_pred cccc-----cccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccc
Confidence 0000 000000 0568999999999999999999999999988877653 223334 699999999999999 8
Q ss_pred HhHHhhhcCcEEEEecCCCC--hhhHHHHHHHhCCCEEEechHHHHHHHhcCCC----CCCCccceeEEEeecCCCChhh
Q 004860 414 ILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCL----EGLDWTKIRSFASTGETSNVDD 487 (727)
Q Consensus 414 ~~~~~l~~G~~lv~~~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~----~~~~l~~Lr~i~~gGe~l~~~~ 487 (727)
.++.++..|+++++++.... +..+++.|+++++|++.++|++++.|++.... ...++++||.+++||++++++.
T Consensus 214 ~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~ 293 (417)
T PF00501_consen 214 ALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDL 293 (417)
T ss_dssp HHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHH
T ss_pred cccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhh
Confidence 89999999999999985432 46789999999999999999999999884322 2357889999999999999999
Q ss_pred HHHHHhhCCCCcccccccccccccccccCC-CCCCccccccccCCCCceEEEECCC-CCcCCCCCCeeeeEEEe-----c
Q 004860 488 DLWLSSKAWYNAIIESCGGTELSSAYIQGS-LLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGLF-----P 560 (727)
Q Consensus 488 ~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~-~~~~~~~~~iG~p~~~~~~~vld~~-~~~~p~G~~giGel~v~-----~ 560 (727)
.+++.+.++..++++.||+||++..++... .......+++|+|+++++++|+|++ ++++|.|+. |||++. .
T Consensus 294 ~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd~~~~~~~~~g~~--Gei~i~~~~~~~ 371 (417)
T PF00501_consen 294 LRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKPGSVGKPLPGVEVKIVDPNTGEPLPPGEP--GEIVIRGPNVFS 371 (417)
T ss_dssp HHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSSTTSEBEESTTEEEEEECTTTSSBESTTSE--EEEEEESTTSBS
T ss_pred ccccccccccccceecccccccceeeeccccccccccccccccccccccccccccccccccccccc--ccccccCCccce
Confidence 999998876668999999999998765432 2222355689999999999999987 999999996 999994 4
Q ss_pred ccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEeecCCeeecC
Q 004860 561 LYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLG 618 (727)
Q Consensus 561 ~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~ 618 (727)
||++ +++.+++.|.+ ++||+|||+|++|+||+++++||.||+||+|
T Consensus 372 gy~~------~~~~~~~~~~~------~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 372 GYYN------DPELTAEAFID------DGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp EETT------BHHHHHHHEET------TSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred eeec------ccccccccccc------ccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 4444 33455566653 2299999999999999999999999999986
No 119
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=5.1e-51 Score=446.24 Aligned_cols=393 Identities=21% Similarity=0.206 Sum_probs=322.8
Q ss_pred cHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 211 TYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 211 TY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
||.||.+.++++|++|.+ . +++||+|+++++|+++++++++||+++|++++|+++.++.+++.+++++++++++++++
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 899999999999999999 7 99999999999999999999999999999999999999999999999999999999987
Q ss_pred ccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeCCCCC
Q 004860 289 FILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYHPRPNYYSPVYNPVDAVVNILFSSGTT 368 (727)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGST 368 (727)
........ .......+.. .+......... .........++++++++||||||
T Consensus 81 ~~~~~~~~----------~~~~~~~~~~--------------~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~TSGTt 132 (408)
T TIGR01733 81 ALASRLAG----------LVLPIILVDP--------------LELAALDDAPA----PPPPDAPSGPDDLAYVIYTSGST 132 (408)
T ss_pred chhhhccc----------cCCceEEech--------------hhhhhcccccc----cccccCCCCCCCcEEEEEcCCCC
Confidence 54321111 1111111110 00000000000 00011113568999999999999
Q ss_pred CCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCC--hhhHHHHHHHhCC
Q 004860 369 GEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL--ERSFGKFVQDAGV 446 (727)
Q Consensus 369 G~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~--~~~l~~~i~~~~v 446 (727)
|.||+|.++|+++++........+++.++|++++..|++|..+++.++.++..|+++++.++... +..+.+.++++++
T Consensus 133 G~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (408)
T TIGR01733 133 GRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHPV 212 (408)
T ss_pred CCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcCc
Confidence 99999999999999988888888899999999999999999999889999999999999876544 6788899999999
Q ss_pred CEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccccccCCC--CCCc--
Q 004860 447 TVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSL--LQPQ-- 522 (727)
Q Consensus 447 t~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~--~~~~-- 522 (727)
|.+.++|++++.|.+... ..+++||.+++||++++++..+++.+.++++.+++.||+||++.+++.... ....
T Consensus 213 t~l~~~p~~~~~l~~~~~---~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~ 289 (408)
T TIGR01733 213 TVLNLTPSLLALLAAALP---PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRE 289 (408)
T ss_pred eEEEeCHHHHHHHHHhhh---hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCc
Confidence 999999999999988653 567899999999999999999999988876899999999999876542211 1111
Q ss_pred cccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCC--CceeeeeCc
Q 004860 523 AFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYK--GMCLRRHGD 595 (727)
Q Consensus 523 ~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~--g~~~yrTGD 595 (727)
...++|+|++++.++|+|+++++++.|+. |||++ ..||++ +++.+...|..+++.. |.+||+|||
T Consensus 290 ~~~~~G~~~~~~~~~i~~~~~~~~~~g~~--Gel~v~~~~~~~gy~~------~~~~~~~~~~~~~~~~~~~~~~~~TGD 361 (408)
T TIGR01733 290 SPVPIGRPLANTRLYVLDDDLRPVPVGVV--GELYIGGPGVARGYLN------RPELTAERFVPDPFAGGDGARLYRTGD 361 (408)
T ss_pred cccccCcccCCceEEEECCCCCCCCCCCc--eEEEecCccccccccC------ChhhhhcceeeCCCCCCCCceEEECCc
Confidence 26789999999999999999999999985 99998 355655 3446666676666533 445999999
Q ss_pred eEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEE
Q 004860 596 IIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAA 643 (727)
Q Consensus 596 l~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~v 643 (727)
+|+++++|++++.||.||+|+++|++|+|.|||++|. .||.|.+|+|
T Consensus 362 l~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~-~~~~v~~~~v 408 (408)
T TIGR01733 362 LVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALL-RHPGVREAVV 408 (408)
T ss_pred eEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHh-cCcchhhhcC
Confidence 9999999999999999999999999999999999996 9999999865
No 120
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-46 Score=402.89 Aligned_cols=316 Identities=18% Similarity=0.182 Sum_probs=259.4
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEe--cCC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY--QGS 431 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~--~~~ 431 (727)
.+++++|++|||||||.||||+++|+++.+........+ ...++++...|+.|..++..++.+++.|++++++ ...
T Consensus 33 ~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~~ 110 (358)
T PRK07824 33 IDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSAG 110 (358)
T ss_pred CCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCCC
Confidence 468999999999999999999999999988777654443 3567888999999999988788999999999884 345
Q ss_pred CChhhHHHHHHHhC--CCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccccccc
Q 004860 432 PLERSFGKFVQDAG--VTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTEL 509 (727)
Q Consensus 432 ~~~~~l~~~i~~~~--vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~ 509 (727)
.++..+++.+++++ +++...+|+.+..++.... ...+++++|.+++||++++++..+++.+. ++++++.||+||+
T Consensus 111 ~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~-~~~~~~~l~~i~~gG~~l~~~~~~~~~~~--~~~v~~~YG~TE~ 187 (358)
T PRK07824 111 FDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA-ATAALAELDAVLVGGGPAPAPVLDAAAAA--GINVVRTYGMSET 187 (358)
T ss_pred cCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc-ccCCcccceEEEECCCCCCHHHHHHHHhc--CCcEEecccCCcc
Confidence 57889999999998 5667778988887766433 23457899999999999999988877653 6889999999998
Q ss_pred ccccccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEE-----ecccCCCCcccccccccccccccccc
Q 004860 510 SSAYIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPM 584 (727)
Q Consensus 510 ~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~ 584 (727)
+..+. ..|+|+++++++|.| |++++ ..||.+.+. . ..|.
T Consensus 188 ~~~~~-----------~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~gY~~~~~-------~-~~~~---- 231 (358)
T PRK07824 188 SGGCV-----------YDGVPLDGVRVRVED-------------GRIALGGPTLAKGYRNPVD-------P-DPFA---- 231 (358)
T ss_pred CCCcC-----------cCceeCCCCEEEecC-------------CEEEEecCccccccCCCcc-------c-cccc----
Confidence 75321 258999999999843 45544 566765432 1 1121
Q ss_pred CCCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecC
Q 004860 585 YKGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (727)
Q Consensus 585 ~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~ 664 (727)
.+| ||+|||+|++ +||+++++||.||+||++|++|+|.|||++|. .||+|.+|+|++.+++..+ +.++++++.+.
T Consensus 232 ~~g--~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~-~~~~V~~~~vv~~~~~~~g-~~~~a~v~~~~ 306 (358)
T PRK07824 232 EPG--WFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALA-THPAVADCAVFGLPDDRLG-QRVVAAVVGDG 306 (358)
T ss_pred CCC--ceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHH-hCCCcceEEEEecCCCCCc-eEEEEEEEeCC
Confidence 122 9999999999 89999999999999999999999999999996 9999999999999988888 89999998876
Q ss_pred CCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhh
Q 004860 665 GFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKH 719 (727)
Q Consensus 665 ~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~ 719 (727)
+...+.+++ ++++++.|++|++|..|+++++||+|++||+||++|++++.+
T Consensus 307 ~~~~~~~~i----~~~~~~~l~~~~~P~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 357 (358)
T PRK07824 307 GPAPTLEAL----RAHVARTLDRTAAPRELHVVDELPRRGIGKVDRRALVRRFAG 357 (358)
T ss_pred CCCcCHHHH----HHHHHhhCccccCCCEEEEecCCCCCCCccccHHHHHHHhhc
Confidence 554554444 455778899999999999999999999999999999998864
No 121
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.3e-44 Score=428.29 Aligned_cols=473 Identities=12% Similarity=0.060 Sum_probs=332.4
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecC
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~ 264 (727)
++++|+++|+.+... .+.+..+||+|+.++++++|.+|.++ +++||+|+|+++|+++|+++.+||+++|++.||++
T Consensus 437 a~~~pd~~al~~~~~---~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~GaV~VPly 513 (1452)
T PTZ00297 437 VTRHSTFRCLGQTSE---SGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALYGFTTLPLV 513 (1452)
T ss_pred HHHCCCCeEEEEecc---CCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEeCC
Confidence 468899999974311 12345899999999999999999999 99999999999999999999999999999999997
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCC-CC-CC--CCCcCcccHHHHhcccC
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGN-DV-GI--PLREQDLSWKDFLSSVD 340 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~-~~--~~~~~~~~~~~~~~~~~ 340 (727)
+ +.+++.+++++++++++|++.... +.+.......-..++++..... .. .. .......+|++++..+.
T Consensus 514 ~--t~~eL~yIL~~S~akvVfv~~~~l------~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~~~~~i~~~s~~~ll~~G~ 585 (1452)
T PTZ00297 514 G--KGSTMRTLIDEHKIKVVFADRNSV------AAILTCRSRKLETVVYTHSFYDEDDHAVARDLNITLIPYEFVEQKGR 585 (1452)
T ss_pred C--CHHHHHHHHHhcCCcEEEEchhHH------HHHHhhcccCCcEEEEECCCcccccccccccCCcceeeHHHHHhcCc
Confidence 5 467899999999999999986432 1111111111123444421100 00 00 00112456888887653
Q ss_pred CCCCCCCCCCccCCCCCeEEEEe---CCCCCCCCCeEEecChHHHHHHHhhchhc---CCCCCCEEEEecccccccchHH
Q 004860 341 YHPRPNYYSPVYNPVDAVVNILF---SSGTTGEPKAIPWTQLSSIRCTAEGWAHI---DLKVGDVYCWPTNLGWVMGPVI 414 (727)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~a~ii~---TSGSTG~PKgV~~th~~l~~~~~~~~~~~---~~~~~d~~l~~~~~~~~~~~~~ 414 (727)
... ........++|++.|+| ||||||.||||++||+|++..+....... ...++|++++++|++|.++...
T Consensus 586 ~~~---~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaHI~er~~ 662 (1452)
T PTZ00297 586 LCP---VPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAMLFNRVF 662 (1452)
T ss_pred ccC---ccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHHHHHHHH
Confidence 211 11122346789999996 99999999999999999998887654322 4567899999999999988766
Q ss_pred hHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcC----CC----------------------CCC
Q 004860 415 LFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTN----CL----------------------EGL 468 (727)
Q Consensus 415 ~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~----~~----------------------~~~ 468 (727)
.+.++..|+++.. .++..+++.|+++++|++.++|.+++.+.... .. .+.
T Consensus 663 ~~~~l~~G~~I~~----~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~~~g~~ 738 (1452)
T PTZ00297 663 VLGLFAHGSAVAT----VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLINIHRR 738 (1452)
T ss_pred HHHHHHcCCEEEe----CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6788999999864 34688999999999999999999998775320 00 000
Q ss_pred Cc----------------cceeEEEeecC--CCChhhHHHHHhhCCCCcccccccccccccccccCCCCCCccccccccC
Q 004860 469 DW----------------TKIRSFASTGE--TSNVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQPQAFGAFSTA 530 (727)
Q Consensus 469 ~l----------------~~Lr~i~~gGe--~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p 530 (727)
.. .++|.+++||. +++..+. . +++++..||.||+.. ...+. .....|+|
T Consensus 739 ~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~-----~--~i~i~~g~glTE~~~---~~~~~---~~~~~G~P 805 (1452)
T PTZ00297 739 DSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLL-----E--HISVCYVPCLREVFF---LPSEG---VFCVDGTP 805 (1452)
T ss_pred CcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHh-----C--CceEEEecceEEeee---ecCCC---CcccCCee
Confidence 00 36899999873 4443222 2 467888999999532 22221 11234999
Q ss_pred CCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCccccccccccccccccccCCCceeeeeCceEEEecCceEEEEee
Q 004860 531 TMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVGGYIIVQGR 610 (727)
Q Consensus 531 ~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR 610 (727)
+|+++++|.|....-...+ .||+++. |.+ +++.|++.+ +.|++||+|.++||
T Consensus 806 lpgvEvKI~~~~E~~~~~~---~GEIlvr--~~k------dpe~T~e~~-----------------~gW~~dG~L~IidR 857 (1452)
T PTZ00297 806 APSLQVDLEPFDEPSDGAG---IGQLVLA--KKG------EPRRTLPIA-----------------AQWKRDRTLRLLGP 857 (1452)
T ss_pred cCceEEEEcccccccCCCC---CCeEEEE--ECC------ChHHHHHhh-----------------CcCccCCeEEEEec
Confidence 9999999987421111112 3999883 333 223333211 34568999999999
Q ss_pred cCCeeec-CceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC-----------C--------CCh
Q 004860 611 ADDTMNL-GGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-----------T--------SQP 670 (727)
Q Consensus 611 ~dd~ik~-~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~-----------~--------~~~ 670 (727)
++|.||. +|++|.|+.||+.+. ++|.|.+++|++... ..++|.|+++... . .+.
T Consensus 858 kKdlikls~GEyVaP~~IE~~l~-~sp~I~qi~V~Gd~~-----k~lvALVvpd~e~l~~~wa~~~gi~~~~~~~~~~~~ 931 (1452)
T PTZ00297 858 PLGILLPVAYEYVIAAELERIFS-QSRYVNDIFLYADPS-----RPIIAIVSPNRDTVEFEWRQSHCMGEGGGPARQLGW 931 (1452)
T ss_pred cccceECCCCcEEcHHHHHHHHh-cCCCccEEEEEecCC-----CceEEEEEeCHHHHHHHHHHHcCCCccccccccCCH
Confidence 9999996 899999999999995 899999999998532 4599999886311 0 122
Q ss_pred HHHHH----HHHHH---HH--hhcCCCcccceEEEcC-CC-----CCCCCchhhHHHHHHHHhhhhcc
Q 004860 671 DKLKM----IFSKA---IQ--SKLNPLFKVSLVKVVP-EF-----PRTASNKLLRRVLRDQIKHELSV 723 (727)
Q Consensus 671 ~~l~~----~l~~~---l~--~~L~~~~~P~~i~~v~-~l-----P~t~~GKvdR~~L~~~~~~~~~~ 723 (727)
+++.+ .+.+. +. ..+..+.+++.|.+++ ++ -+||+.|+.|+.+.+.|++++++
T Consensus 932 ~el~~~~~~~v~~~i~~V~~~n~l~~~ei~k~~~Ll~~~Ft~enGlLTPTlKlKR~~I~~kY~~~Ie~ 999 (1452)
T PTZ00297 932 TELVAYASSLLTADFACIAKENGLHPSNVPEYVHLHPHAFKDHSTFLTPYGKIRRDAVHSYFSSVIER 999 (1452)
T ss_pred HHHHHhHHHHHHHHHHHHHHHhCcCccceeeEEEEeCCCCCCCCCcCChhhhhhHHHHHHHHHHHHHH
Confidence 33322 12222 22 2366778888777764 45 48999999999999999998875
No 122
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2.3e-41 Score=360.82 Aligned_cols=289 Identities=13% Similarity=0.110 Sum_probs=227.6
Q ss_pred CCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCC--CCEEEEecccccccch-HHhHHhhhcCcEEEEecCCC
Q 004860 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKV--GDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQGSP 432 (727)
Q Consensus 356 ~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~--~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~ 432 (727)
++.++++|||||||.||||+++|+++.+.+.+....+++.. .|++++..|++|..+. +.++.++..|+++++.+ ..
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~-~~ 173 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLA-AA 173 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecC-CC
Confidence 45789999999999999999999999988877766677644 4689999999998776 66788999999999876 35
Q ss_pred ChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCcccccccccccccc
Q 004860 433 LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSA 512 (727)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~ 512 (727)
++..+++.++. .|++.++|++++.|.+.. .++++++. ++||+++++++.+.+.+. +..++++.||+||++++
T Consensus 174 ~~~~~l~~i~~--~t~~~~~P~~l~~l~~~~----~~l~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i 245 (386)
T TIGR02372 174 PASGIMRHARP--GDLIVGTPFIWEQLADLD----YRLPGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGI 245 (386)
T ss_pred ChHHHHHhhcc--CCEEEECcHHHHHHHhhC----cCCCccee-EecCCCCCHHHHHHHHHh-cccchhheecccccccc
Confidence 56677777654 389999999999998652 34677886 688999999998888764 33469999999999864
Q ss_pred cccCCCCCCccccccccCCCCceEEEECCCCCcCCCCCCeeeeEEEecccCCCCccccccccccccccccccCCCceeee
Q 004860 513 YIQGSLLQPQAFGAFSTATMTAGLVILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRR 592 (727)
Q Consensus 513 ~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yr 592 (727)
..... ....|+|+|+.++.+ | ++. + .| | ..|++
T Consensus 246 ~~~~~------~~~~~~~~p~~~~~~-~-~~~----------~----~g---------------------~----~~~~~ 278 (386)
T TIGR02372 246 GLREA------PDDPFRLLPDLACFA-D-TLS----------S----AG---------------------L----ARRLD 278 (386)
T ss_pred ccccC------CCCCcccCCCccccC-C-Ccc----------C----CC---------------------c----cceee
Confidence 33221 122356666654432 1 110 0 00 0 01689
Q ss_pred eCceEEEecCceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHH
Q 004860 593 HGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDK 672 (727)
Q Consensus 593 TGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~ 672 (727)
|||+++|+++|+++|+||+||+||++|++|+|.|||++|. .||+|.+|+|.. .+ ++++++|+++++. +.+.
T Consensus 279 tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~-~~p~V~~~~v~~-----~g-~~~~a~vv~~~~~--~~~~ 349 (386)
T TIGR02372 279 LQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILE-RNPRVRAAAVRL-----DG-RRLKAFIVVAEDA--DEAE 349 (386)
T ss_pred cCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHH-cCCCceEEEEEc-----CC-ceEEEEEEECCCC--ChHH
Confidence 9999999999999999999999999999999999999995 999999998752 34 7899999988643 2244
Q ss_pred HHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhh
Q 004860 673 LKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLL 709 (727)
Q Consensus 673 l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvd 709 (727)
+.+.+++.++++|++|++|..+.++++||+|++||++
T Consensus 350 ~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 350 LEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred HHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 5567777888999999999999999999999999985
No 123
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7.3e-39 Score=361.64 Aligned_cols=489 Identities=16% Similarity=0.124 Sum_probs=329.8
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC
Q 004860 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS 266 (727)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~ 266 (727)
..|...+..+-......+....+||++....++.+++.|... ...|+.|++++..+.++++.+++++++|.+++++||+
T Consensus 48 ~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~~~g~~~~~idp~ 127 (1032)
T KOG1178|consen 48 EAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVLAAGLTFLPIDPS 127 (1032)
T ss_pred hcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehhhcceEEEEecCC
Confidence 444555444432222235566999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CC----HHHHHH---HHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhccc
Q 004860 267 FA----AREIAT---RLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSV 339 (727)
Q Consensus 267 ~~----~~~l~~---~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (727)
+| ++++.. .+......++ +.++.......... .........-.+..+....
T Consensus 128 ~~~~e~~~~~~~ia~~~~s~~~~i~----------~~l~i~~~~~~~~~------------~~~sv~~~~~~f~~~~~~~ 185 (1032)
T KOG1178|consen 128 WPNSELAGYLMRIAHFLTSVELEIV----------RRLNIIDILLNSLF------------PKLSVETIADSFQMVLHNE 185 (1032)
T ss_pred CcccccchHHHhhhhhheeccceeh----------hhhhhHHHHhhccc------------cccchhhccchhhhhhccC
Confidence 99 332211 1111111111 11111111111110 0000000001111111111
Q ss_pred CCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhh
Q 004860 340 DYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSF 419 (727)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l 419 (727)
........-+++.+++.||||+||.||||.-+|..+.+...|....+..+..+++-......++-.....+.++
T Consensus 186 ------~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~ 259 (1032)
T KOG1178|consen 186 ------DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGAL 259 (1032)
T ss_pred ------CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhhH
Confidence 11222334567899999999999999999999999999999999999999999886666676777776665665
Q ss_pred hcCcEEEEecCCC---ChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCC-------------CCCccceeEEEeecCCC
Q 004860 420 LNGATLALYQGSP---LERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLE-------------GLDWTKIRSFASTGETS 483 (727)
Q Consensus 420 ~~G~~lv~~~~~~---~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~-------------~~~l~~Lr~i~~gGe~l 483 (727)
+..+..++++-.. .+..+.+++++++++..+.+|++.++++...... ....+.|+....+||+.
T Consensus 260 L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~ 339 (1032)
T KOG1178|consen 260 LFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPL 339 (1032)
T ss_pred hhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCcc
Confidence 5555544544322 2678999999999999999999988887653221 11234799999999998
Q ss_pred ChhhHHHHHhhCCCCcccccccccccccccccCCCCC------Cc-------cccccccCCCCceEEEECCCCCcCCCCC
Q 004860 484 NVDDDLWLSSKAWYNAIIESCGGTELSSAYIQGSLLQ------PQ-------AFGAFSTATMTAGLVILDECGVPYPDDQ 550 (727)
Q Consensus 484 ~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~------~~-------~~~~iG~p~~~~~~~vld~~~~~~p~G~ 550 (727)
...+.......+.-.-...-|++|+.....+...... .. ....+|. .+.+.++...+.+.+.++
T Consensus 340 ~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~~~v~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~v 416 (1032)
T KOG1178|consen 340 LVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTNENVYSVPKFDSIIGS---LTVLESLYRAGGEGEGGV 416 (1032)
T ss_pred chhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecceeEEeccchhhccCC---CcceeeeeccCcccCCcc
Confidence 8777653333322122334488777765433211100 00 0001111 133445555566665554
Q ss_pred CeeeeEEEecccCCCCccccccccccccccccc-cC--CCceeeeeCceEEEecCceEEEEeecCCeeecCceeechHHH
Q 004860 551 PCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP-MY--KGMCLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEI 627 (727)
Q Consensus 551 ~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p-~~--~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eI 627 (727)
|..+++.++....-.. ....+...|.++. +. ...|+|||||+|+..++|.+.+.||.|+|||+||+||+++||
T Consensus 417 ---~~~~l~~~~~~~~~~~-~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei 492 (1032)
T KOG1178|consen 417 ---GKGCLGAEQNLSSWVV-DGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGEL 492 (1032)
T ss_pred ---cceeecccccccceee-ccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhh
Confidence 4444433333211100 0001222222222 12 236799999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCch
Q 004860 628 ERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNK 707 (727)
Q Consensus 628 E~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GK 707 (727)
++++. .||.|.++.+....+...+ +.+++||+...+... .+...|+++++++|++||+|+.++.++++|+|+|||
T Consensus 493 ~t~v~-~~p~v~~~itl~~~~~~~~-~~l~aFvv~~~~~~~---~~~~~i~~~l~~~La~y~vPs~~V~l~~vPl~~~GK 567 (1032)
T KOG1178|consen 493 NTVVE-VHPDVKEAITLARENSTVG-QTLLAFVVERGGSKS---VLIRDIRNYLKKELASYMLPSLVVPLAKVPLNPNGK 567 (1032)
T ss_pred chhhc-cCcchhhhheeeeeccccC-ceEEEEEeccCCCCc---hhHHHHHHhhcccccceecceEEEEhhhCCcCCCCC
Confidence 99996 8899999999999998887 999999998865443 336678889999999999999999999999999999
Q ss_pred hhHHHHHHH
Q 004860 708 LLRRVLRDQ 716 (727)
Q Consensus 708 vdR~~L~~~ 716 (727)
||+++|.+.
T Consensus 568 vDkkaL~~~ 576 (1032)
T KOG1178|consen 568 VDKKALLEY 576 (1032)
T ss_pred cChhhhhhh
Confidence 999999983
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=1.9e-36 Score=331.34 Aligned_cols=326 Identities=18% Similarity=0.169 Sum_probs=238.8
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~~~ 429 (727)
+++++++++|||||||.||+|+++|.++..... .....+++.++|++++..++++..+. ...+.++..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 557889999999999999999999998765432 22344688999999887766654433 33566788899988765
Q ss_pred CCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCC--CccceeEEEeecCCCChhhHHHHHhhCCCCccccccccc
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGT 507 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~T 507 (727)
. .+++.+++.|+++++|++.++|+++..|++....... ...+||.+++|||+++++..+++.+.+ +++++|.||+|
T Consensus 153 ~-~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~-g~~v~~~YG~t 230 (422)
T TIGR02155 153 G-GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARL-GMKATDIYGLS 230 (422)
T ss_pred C-CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHh-CCceEecccch
Confidence 4 3468899999999999999999999988764322222 235899999999999999988887776 58999999999
Q ss_pred ccccccccCCCCCCccccccccCC--CCceEEEEC-CCCCcCCCCCCeeeeEEEecccCCCCcccccccccccccccccc
Q 004860 508 ELSSAYIQGSLLQPQAFGAFSTAT--MTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPM 584 (727)
Q Consensus 508 E~~~~~~~~~~~~~~~~~~iG~p~--~~~~~~vld-~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~ 584 (727)
|+++......... . ..|.++ ++..+.|+| ++|+++|+|+. |||+++... +..| |.
T Consensus 231 E~~~~~~~~~~~~-~---~~g~~~~~~~~~~eivd~~~g~~v~~Ge~--Gelvvt~~~-------------~~~~---p~ 288 (422)
T TIGR02155 231 EVIGPGVAMECVE-T---QDGLHIWEDHFYPEIIDPHTGEVLPDGEE--GELVFTTLT-------------KEAL---PV 288 (422)
T ss_pred hhcCCceeecccc-c---CCCceEecCeeEEEEECCCCCCCCCCCCe--eEEEEecCC-------------cccc---ce
Confidence 9852111111100 0 123333 356678999 58999999996 999986321 1122 21
Q ss_pred CCCceeeeeCceEEEecC-c-----eEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEE
Q 004860 585 YKGMCLRRHGDIIKRTVG-G-----YIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVI 658 (727)
Q Consensus 585 ~~g~~~yrTGDl~~~~~d-G-----~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a 658 (727)
.||+|||+++++++ | .+++.||.||+||++|.+|+|.|||++|. .||+|...+.+.+...... +.+++
T Consensus 289 ----~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~-~~~~v~~~~q~~~~~~~~~-~~~~~ 362 (422)
T TIGR02155 289 ----IRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVIL-KMDELSPHYQLELTRNGHM-DELTL 362 (422)
T ss_pred ----eeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHH-hCcCcCCCEEEEEEcCCCc-cEEEE
Confidence 28999999999876 4 46899999999999999999999999995 8999985555555544433 57888
Q ss_pred EEEecCCCC-----CChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHH
Q 004860 659 FVVLKKGFT-----SQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRR 711 (727)
Q Consensus 659 ~vv~~~~~~-----~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~ 711 (727)
.|+..++.. .+.+.+.+.|++.+++.+..+.. -.|+.+++||+|+ ||+.|.
T Consensus 363 ~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-v~~~~~~~lp~~~-GK~~~~ 418 (422)
T TIGR02155 363 KVELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSMD-VHLVEPGSLPRSE-GKARRV 418 (422)
T ss_pred EEEEecCcccccchHHHHHHHHHHHHHHHhccCcEEE-EEEECCCCccCCC-CCceEE
Confidence 888765432 12244567788888888876532 2333447999988 999763
No 125
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.97 E-value=6.4e-29 Score=272.04 Aligned_cols=328 Identities=15% Similarity=0.088 Sum_probs=219.4
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhch---hcCCCCCCEEEEecccccccchHH-hHHhhhcCcEEEEe
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWA---HIDLKVGDVYCWPTNLGWVMGPVI-LFSSFLNGATLALY 428 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~~~~~~~~~~~-~~~~l~~G~~lv~~ 428 (727)
.+.++++.+.|||||||+||+|.+||+++......... ..+++++|+++...+++++.+.+. .++++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 35678999999999999999999999998765544332 358999999999999888777644 35567788876543
Q ss_pred cCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCC--CccceeEEEeecCCCChhhHHHHHhhCCCCcccccccc
Q 004860 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGL--DWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGG 506 (727)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~--~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~ 506 (727)
. . ....+++|+++++|++.++|+.+..|.+....... ..++||.+++|||+++++..+++.+.+ +++++|.||+
T Consensus 163 ~-~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~-g~~v~~~YG~ 238 (445)
T TIGR03335 163 G-K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELW-GCEVYNTYGS 238 (445)
T ss_pred C-c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHh-CCcEEecCCh
Confidence 2 2 23568899999999999999988777653222221 246899999999999999888877665 6899999999
Q ss_pred cccccccccCCCCCCccccccccCCCCceEEEECCC-CCcCCCCCCeeeeEEEecccCCCCccccccccccccccccccC
Q 004860 507 TELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDEC-GVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMY 585 (727)
Q Consensus 507 TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~-~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~~ 585 (727)
||++.. ..+.. ......+.+...+.|+|++ +.++|+|+. |||+++..+-.. .-...|..
T Consensus 239 TE~~~~-~~c~~-----~~g~h~~~d~~~vEIvDp~~~~~vp~Ge~--GELvvT~L~~~~------------~r~~~Pli 298 (445)
T TIGR03335 239 TEGTMC-GECQA-----VAGLHVPEDLVHLDVYDPRHQRFLPDGEC--GRIVLTTLLKPG------------ERCGSLLI 298 (445)
T ss_pred hhhhhe-EEecC-----CCCccccCCceEEEEEcCCCCCCCcCCCc--eEEEEEecCCCC------------ccCCceEE
Confidence 998632 21111 1112233445789999976 567899996 999996543210 00012322
Q ss_pred CCceeeeeCceEEEec-C----c----eEEEEeecCCeeecCceeechHHHHHHHhhcC---CCceeeE-EEeecCCCCC
Q 004860 586 KGMCLRRHGDIIKRTV-G----G----YIIVQGRADDTMNLGGIKTSSVEIERVCDQAD---ESILETA-AISVSPAGGG 652 (727)
Q Consensus 586 ~g~~~yrTGDl~~~~~-d----G----~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~---p~V~~a~-vv~~~~~~~~ 652 (727)
-|+|||++++.. + | .+...||.||+++++|.+|+|.+||++|. ++ +++.... ++...+. .+
T Consensus 299 ----RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~-~~~~~~~~~~~~~~~~~~~~-~~ 372 (445)
T TIGR03335 299 ----NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVF-QRENMDSLTGEYEAFLYGEE-EG 372 (445)
T ss_pred ----EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHh-ccCCCCCCCccEEEEEecCC-CC
Confidence 289999999742 2 2 14457999999999999999999999996 74 5554333 3332222 22
Q ss_pred ceEEEEEEEecCCCCCChHHHHHHHHHH----H---HhhcCCCcccceEEEc--CCCCCCC-CchhhH
Q 004860 653 PEVLVIFVVLKKGFTSQPDKLKMIFSKA----I---QSKLNPLFKVSLVKVV--PEFPRTA-SNKLLR 710 (727)
Q Consensus 653 ~~~l~a~vv~~~~~~~~~~~l~~~l~~~----l---~~~L~~~~~P~~i~~v--~~lP~t~-~GKvdR 710 (727)
...+..-|...++...+.+++.+.+.+. + +..+....+...+.++ ..||+++ .||..|
T Consensus 373 ~~~~~v~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~r 440 (445)
T TIGR03335 373 EITLRVSLECEDKDNCSIHDIQENFTGTFLKYKPELIGSYDEGIFQILVNFTGPGELELHKIKGRPKR 440 (445)
T ss_pred CceEEEEEEecCcccchHHHHHHHHHHHHhhhhhhhhhhhhcceEEEEEEEeCCCCccccccCCCcee
Confidence 2356566666554333445555555444 1 1111112222334444 4799984 688755
No 126
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=7.3e-26 Score=247.71 Aligned_cols=508 Identities=15% Similarity=0.149 Sum_probs=333.4
Q ss_pred CCCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEee
Q 004860 185 HRRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVS 262 (727)
Q Consensus 185 ~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~--v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vp 262 (727)
.++++||.+|+..-+.. +....++||+++..+|.++|.+|... +++||.|+++.++++|++++++||+.+|.+++|
T Consensus 779 R~a~tp~~~a~~~~n~~--~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly~GliPIp 856 (1363)
T KOG3628|consen 779 RAAKTPDHIAFTTLNAR--GATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLYLGLIPIP 856 (1363)
T ss_pred HhhcCCCceEEEEeccC--CcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHhcCeeeec
Confidence 35799999999987653 34557999999999999999999988 999999999999999999999999999999999
Q ss_pred cCCCCC------HHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHh
Q 004860 263 IADSFA------AREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFL 336 (727)
Q Consensus 263 l~p~~~------~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 336 (727)
+.|... -..+..+++..+++.|+++.......+.......+...+-+.+.+.+... .+|..-.
T Consensus 857 v~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~-----------~t~~k~~ 925 (1363)
T KOG3628|consen 857 VPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLP-----------ETIRKRK 925 (1363)
T ss_pred cCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccc-----------hhhhhhh
Confidence 988543 34688899999999999998644322222222222222212222221111 0121111
Q ss_pred cccCCCCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHh
Q 004860 337 SSVDYHPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VIL 415 (727)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~ 415 (727)
..... .....++-...++.+||+-+.--++|.--||..+|.++++.++.....+.+.+..-++..+++.-..|+ ...
T Consensus 926 ~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~wc 1003 (1363)
T KOG3628|consen 926 KNIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHWC 1003 (1363)
T ss_pred hhhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHHH
Confidence 11111 111122233456889999998889999999999999999999999888888887777776666655555 335
Q ss_pred HHhhhcCcEEEEecC---CCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccce------eEEEeecCCCChh
Q 004860 416 FSSFLNGATLALYQG---SPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKI------RSFASTGETSNVD 486 (727)
Q Consensus 416 ~~~l~~G~~lv~~~~---~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~L------r~i~~gGe~l~~~ 486 (727)
+...++|...++.++ ..++..|++.|++++|.-++.+-+.+..+......+..+++.. ..++..-|+....
T Consensus 1004 LlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv~~~~RPr~a 1083 (1363)
T KOG3628|consen 1004 LLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVVPAEERPRIA 1083 (1363)
T ss_pred HHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceeeecCCccHHH
Confidence 667778888777654 3367889999999999999998888888766533222222211 2333334443333
Q ss_pred hHHHHHhhCC----CC-ccc-------------ccccccccccccccCCCCCCccc-------------cccccCCCCce
Q 004860 487 DDLWLSSKAW----YN-AII-------------ESCGGTELSSAYIQGSLLQPQAF-------------GAFSTATMTAG 535 (727)
Q Consensus 487 ~~~~~~~~~~----~~-~l~-------------n~YG~TE~~~~~~~~~~~~~~~~-------------~~iG~p~~~~~ 535 (727)
...-+.+.+. .+ .+- +.|..-|=+..+.-......... -..|.-.++++
T Consensus 1084 li~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~ 1163 (1363)
T KOG3628|consen 1084 LIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTD 1163 (1363)
T ss_pred HHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccce
Confidence 3332322210 00 111 22222221111110000000000 11367778899
Q ss_pred EEEECCC-CCcCCCCCCeeeeEEE-----ecccCCCCccccccccccccccccccCCCceeeeeCceEEEec------C-
Q 004860 536 LVILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTV------G- 602 (727)
Q Consensus 536 ~~vld~~-~~~~p~G~~giGel~v-----~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~------d- 602 (727)
+.|++++ ..||.+|+ +||||+ +.+|++..+. ++.+...++.. .....+..|-||||+|.... +
T Consensus 1164 i~IvnPEtk~pc~dge--~GEIW~~S~hnA~~~~~~~d~-~~~~~fn~rl~-~g~~~~~sy~RTG~LGFl~~t~~t~~~~ 1239 (1363)
T KOG3628|consen 1164 IAIVNPETKGPCRDGE--LGEIWVNSAHNASCSFTIGDE-LRSNHFNARLS-SGDLLGKSYARTGDLGFLRRTSLTDANV 1239 (1363)
T ss_pred eEEeCCccccccccCC--cceEEeccccccccccccCch-hhhhhhhhhcc-ccccccccceeeeeeeeeeeeecccccc
Confidence 9999954 66888887 599999 3445443221 22222222222 22234667999999999742 2
Q ss_pred ---ceEEEEeecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHH
Q 004860 603 ---GYIIVQGRADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSK 679 (727)
Q Consensus 603 ---G~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~ 679 (727)
.-||++|-.++.+-++|.|.+|.+||..+.+.||.|.+|+|+-.. ..+|..+.+.. +....+|.-.|.
T Consensus 1240 e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~------glvVvviE~~g--q~~~~~LvPlIv- 1310 (1363)
T KOG3628|consen 1240 ERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQAT------GLVVVVIECHG--QQELADLVPLIV- 1310 (1363)
T ss_pred eeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeC------CeEEEEEEecC--chhHhhhhHHHH-
Confidence 358999999999999999999999999999899999999988642 46777777664 333344444443
Q ss_pred HHHhhcCCCccc-ceEEEcC--CCCCCCCchhhHHHHHHHH-hhhhc
Q 004860 680 AIQSKLNPLFKV-SLVKVVP--EFPRTASNKLLRRVLRDQI-KHELS 722 (727)
Q Consensus 680 ~l~~~L~~~~~P-~~i~~v~--~lP~t~~GKvdR~~L~~~~-~~~~~ 722 (727)
...|..+.+. ..+.+++ .+|+++.|-.+|..+.+.+ .++++
T Consensus 1311 --~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~ 1355 (1363)
T KOG3628|consen 1311 --NVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLD 1355 (1363)
T ss_pred --HHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccc
Confidence 3445555665 6677776 5999999999999988876 44443
No 127
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.93 E-value=2.9e-24 Score=212.32 Aligned_cols=217 Identities=16% Similarity=0.114 Sum_probs=159.5
Q ss_pred CCCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHh-h-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeec
Q 004860 186 RRKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDT-M-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 186 a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~-~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl 263 (727)
++.+|+++|+++.+.. .+...++||+||.++++++|+.|++ . +++||+|+|+++|+++++++++||+++|++++|+
T Consensus 6 ~~~~p~~~al~~~~~~--~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~vp~ 83 (227)
T TIGR03089 6 LAADPASPRLTFYDDA--TGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVVLA 83 (227)
T ss_pred hhhCCCCcEEEEEcCC--CCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEeC
Confidence 4678999999864321 0122479999999999999999998 8 9999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCC--CCCCCCCCCcCcccHHHHhcccCC
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAI--GNDVGIPLREQDLSWKDFLSSVDY 341 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 341 (727)
+ ++++++++++++...... .+..++.+... ..........+..+|.+.+.....
T Consensus 84 n-------------~s~a~~~v~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (227)
T TIGR03089 84 G-------------DPDADVVVTGPDRLAAAA-----------GSGEVVALSLDPLGRRVAGELPPGVIDFAPEVRVHGD 139 (227)
T ss_pred C-------------CCCCCEEEeCcchhhhcc-----------cCCceEEEeccccccCCCCCCCCcccchhhhhhccCC
Confidence 4 889999999886542211 11233333211 000000112233456655543221
Q ss_pred CCCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhh
Q 004860 342 HPRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFL 420 (727)
Q Consensus 342 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~ 420 (727)
...+.....++|++.|+||||+ +|++++... ...+++++|+++ .+|++|..++ ..++.+|.
T Consensus 140 ----~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~ 201 (227)
T TIGR03089 140 ----QFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLA 201 (227)
T ss_pred ----CCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhc
Confidence 0111113456899999999985 666655544 456789999999 9999999998 56889999
Q ss_pred cCcEEEEecCCCChhhHHHHHHHhCCC
Q 004860 421 NGATLALYQGSPLERSFGKFVQDAGVT 447 (727)
Q Consensus 421 ~G~~lv~~~~~~~~~~l~~~i~~~~vt 447 (727)
.|+++++.+ .+++..+++.|+++|||
T Consensus 202 ~G~t~v~~~-rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 202 AGGSLVLVT-HPDPARLDQIAETERVT 227 (227)
T ss_pred cCceEEEec-CCCHHHHHHHHHhhcCC
Confidence 999999996 78999999999999997
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.92 E-value=5e-23 Score=213.54 Aligned_cols=324 Identities=23% Similarity=0.200 Sum_probs=226.4
Q ss_pred cCCCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccch-HHhHHhhhcCcEEEE
Q 004860 352 YNPVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGP-VILFSSFLNGATLAL 427 (727)
Q Consensus 352 ~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~~~~~l~~G~~lv~ 427 (727)
..+-++...|--||||||+|+-+..++..+-. .+.......+...+|++.....++...+- ...+++--.|++++-
T Consensus 86 ~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip 165 (438)
T COG1541 86 AVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIP 165 (438)
T ss_pred cccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEc
Confidence 34456677788999999999999999987543 33344445688999998877766644433 445566666666543
Q ss_pred ecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCC--CCccceeEEEeecCCCChhhHHHHHhhCCCCccccccc
Q 004860 428 YQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEG--LDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCG 505 (727)
Q Consensus 428 ~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~--~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG 505 (727)
.. ...-..-+++|+.+++|++.++|+.+..|.+...... .+-.+|+.+++|+|+++++.+..+..++ +++.++.||
T Consensus 166 ~~-~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~-g~~~~diYG 243 (438)
T COG1541 166 IS-GGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRF-GCKAFDIYG 243 (438)
T ss_pred cC-CccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHh-CCceeeccc
Confidence 33 2355778899999999999999999999987654442 3345899999999999999999888876 788999999
Q ss_pred cccccccc-ccCCCCCCccccccccCCCCceEEEEC-CCCCcCCCCCCeeeeEEEecccCCCCccccccccccccccccc
Q 004860 506 GTELSSAY-IQGSLLQPQAFGAFSTATMTAGLVILD-ECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMP 583 (727)
Q Consensus 506 ~TE~~~~~-~~~~~~~~~~~~~iG~p~~~~~~~vld-~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p 583 (727)
.||..++- ..+.... -....-++.-+.|+| +.|+++|+|+. |||+++..--. ..|
T Consensus 244 ltE~~g~g~~eC~~~~-----glhi~eD~~~~Ei~dP~t~e~l~dge~--GelV~T~L~~~----------------~~P 300 (438)
T COG1541 244 LTEGFGPGAGECTERN-----GLHIWEDHFIFEIVDPETGEQLPDGER--GELVITTLTKE----------------GMP 300 (438)
T ss_pred cccccCCccccccccc-----CCCcchhhceeeeecCCcCccCCCCCe--eEEEEEecccc----------------Ccc
Confidence 99997652 2221111 112345567889999 67999999996 99998542211 123
Q ss_pred cCCCceeeeeCceEEEecC----ce-----EEEEeecCCeeecCceeechHHHHHHHhhcCCCce-eeEEEeecCCCCCc
Q 004860 584 MYKGMCLRRHGDIIKRTVG----GY-----IIVQGRADDTMNLGGIKTSSVEIERVCDQADESIL-ETAAISVSPAGGGP 653 (727)
Q Consensus 584 ~~~g~~~yrTGDl~~~~~d----G~-----l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~-~a~vv~~~~~~~~~ 653 (727)
.. -|+|||+++..++ |+ ..+.||.||+++++|.+|+|..||.+|. +.+.+. +-.++... ....
T Consensus 301 lI----RYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~-~~~~~~~~yqi~~~~-~~~~- 373 (438)
T COG1541 301 LI----RYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLL-QIPEVTPHYQIILTR-NGGL- 373 (438)
T ss_pred eE----EEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHh-cccCCCceEEEEEec-CCCC-
Confidence 32 2999999999774 22 3589999999999999999999999997 899988 44455444 3233
Q ss_pred eEEEEEEEecCCCCCC--hHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhh
Q 004860 654 EVLVIFVVLKKGFTSQ--PDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLL 709 (727)
Q Consensus 654 ~~l~a~vv~~~~~~~~--~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvd 709 (727)
..+.+-|+++++.... ...+...+...+...+.- .+--.++.+.++|+|.. |..
T Consensus 374 d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~v~~v~~g~l~r~~~-K~k 429 (438)
T COG1541 374 DELTVRVELENEAEELEDERRLAKKLIKNIKSELGV-RVEVELVEPGELPRTEG-KAK 429 (438)
T ss_pred ceEEEEEEecCcccchHHHHHHHHHHHHHHHhhcCC-ceEEEEEeccceecccC-cee
Confidence 6788888887642111 122224555555554431 11134555679999875 643
No 129
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.4e-21 Score=202.24 Aligned_cols=118 Identities=16% Similarity=0.197 Sum_probs=104.2
Q ss_pred eeeeeCceEEE-ecCceEEEEeecCCeeecCc---eeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecC
Q 004860 589 CLRRHGDIIKR-TVGGYIIVQGRADDTMNLGG---IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKK 664 (727)
Q Consensus 589 ~~yrTGDl~~~-~~dG~l~~~GR~dd~ik~~G---~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~ 664 (727)
.||+|||+|++ |+||+++|.||.| +| ++|+|. ||++|. +||+|.+|+|++++++.+| +.++|||++..
T Consensus 209 gW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~-~hp~V~eaaVvgvpd~~~g-e~v~A~Vv~~~ 280 (365)
T PRK09188 209 IWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALK-SDPAVSDVAIALFSLPAKG-VGLYAFVEAEL 280 (365)
T ss_pred cEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHH-hCCCccEEEEEEEEcCCCC-eEEEEEEEECC
Confidence 39999999998 6999999999998 88 799999 999995 9999999999999999888 99999999864
Q ss_pred CCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhhhh
Q 004860 665 GFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPEFPRTASNKLLRRVLRDQIKHEL 721 (727)
Q Consensus 665 ~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~~ 721 (727)
..+.+++++ .++++|++ ++|..|+++++||+|+||||+|+.|++++.+..
T Consensus 281 --~~~~~el~~----~l~~~L~~-kvP~~v~~v~~lP~t~~GKi~R~~Lr~~~~~~~ 330 (365)
T PRK09188 281 --PADEKSLRA----RLAGAKPP-KPPEHIQPVAALPRDADGTVRDDILRLIAMNQI 330 (365)
T ss_pred --CCCHHHHHH----HHHhhchh-cCCcEEEEECCCCCCCCCCccHHHHHHHhhccc
Confidence 345455555 57778899 999999999999999999999999999875443
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.74 E-value=4e-16 Score=167.04 Aligned_cols=258 Identities=17% Similarity=0.095 Sum_probs=163.2
Q ss_pred eEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcE-EEEecCCCC
Q 004860 358 VVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGAT-LALYQGSPL 433 (727)
Q Consensus 358 ~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~-lv~~~~~~~ 433 (727)
-..+..||||||.|-.+.++......... ......++..++++..+. +..+ .++..+.+... +-.++-..+
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~---~~~~--~ly~~~~~~~~~~~~~~l~~~ 175 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFL---RADN--NLYQSVNNRWISLDFFDLLAP 175 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEE---ccCh--hHHHHHHhccceeeecCCCcC
Confidence 35677899999999999999876432221 112223566777766542 1111 22233322221 233333345
Q ss_pred hhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhhCCCCccccccccccccccc
Q 004860 434 ERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSKAWYNAIIESCGGTELSSAY 513 (727)
Q Consensus 434 ~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 513 (727)
.+..++.|++++++++.++|+.+..|++.......+ .+++.++++||.+++...+.+.+.+ ++++++.||+|| +...
T Consensus 176 ~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~-~~~k~ii~~~E~l~~~~r~~Ie~~f-g~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 176 FQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELT-IKPKKVISVAEVLEPQDRELIRNVF-KNTVHQIYQATE-GFLA 252 (430)
T ss_pred HHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCC-CCceEEEEccCCCCHHHHHHHHHHh-CCCeeEccCCch-hheE
Confidence 678899999999999999999999998864333333 4789999999999998887777776 689999999999 4433
Q ss_pred ccCCCCCCccccccccCCCCceEE--EECCCCCcCCCCCCeeeeEEEecccCCCCccccccccccccccccccCCCceee
Q 004860 514 IQGSLLQPQAFGAFSTATMTAGLV--ILDECGVPYPDDQPCVGEVGLFPLYLGASDRLLNADHEEVYFRGMPMYKGMCLR 591 (727)
Q Consensus 514 ~~~~~~~~~~~~~iG~p~~~~~~~--vld~~~~~~p~G~~giGel~v~~~y~~~~~~~~~~~~~~~~f~~~p~~~g~~~y 591 (727)
..+.. +....--...-++ ++|++++++ .+|+.-+ +. ..|.. -|
T Consensus 253 ~eC~~------g~lHl~ed~~~vE~~ivD~~~~~~---------~ViT~L~-n~---------------~~PlI----RY 297 (430)
T TIGR02304 253 STCRC------GTLHLNEDLVHIEKQYLDEHKRFV---------PIITDFT-RT---------------TQPIV----RY 297 (430)
T ss_pred EecCC------CCEEEccccEEEEeeEECCCCceE---------EEEecCC-Cc---------------cceEE----ee
Confidence 22211 1111111223344 788766433 2332221 10 13332 29
Q ss_pred eeCceEEEecC----ce----E-EEEeecCCeeec---Cc--eeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEE
Q 004860 592 RHGDIIKRTVG----GY----I-IVQGRADDTMNL---GG--IKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLV 657 (727)
Q Consensus 592 rTGDl~~~~~d----G~----l-~~~GR~dd~ik~---~G--~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~ 657 (727)
+|||++++.++ |. | .+.||.||++++ +| ..|.|..|+.++....++|.+..++... . ..+.
T Consensus 298 rtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~~---~--~~l~ 372 (430)
T TIGR02304 298 RLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQTG---S--AQLE 372 (430)
T ss_pred eCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEcc---C--CeEE
Confidence 99999998554 32 3 378999999985 34 4569999998865467889888776422 2 4566
Q ss_pred EEEEec
Q 004860 658 IFVVLK 663 (727)
Q Consensus 658 a~vv~~ 663 (727)
..+++.
T Consensus 373 v~~~~~ 378 (430)
T TIGR02304 373 LIADCE 378 (430)
T ss_pred EEEEeC
Confidence 666653
No 131
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.58 E-value=3.3e-13 Score=149.55 Aligned_cols=485 Identities=14% Similarity=0.113 Sum_probs=286.2
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHH-HHHhh-cCCCCEEEEEcCCC--HHHHHHHHHHHHhCCEEee
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVAN-ALDTM-FSKGDAIAIDMPMT--VRAVIIYLAIILAGYVVVS 262 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~-~L~~~-v~~gd~Vai~~~~s--~~~vva~lA~~kaGa~~vp 262 (727)
..++..+|.++-+.. +....+||..+..++.+.|+ .|.+- ..++|+|.++...+ .++++++++|.-.|.+.+|
T Consensus 105 nhs~~~ta~i~id~k---gk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc~l~g~~~vp 181 (1363)
T KOG3628|consen 105 NHSATSTAHICIDKK---GKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGCFLLGIVAVP 181 (1363)
T ss_pred cCCCCCceEEEEcCC---CceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccccccceeecc
Confidence 467788888887763 23669999999999999999 45555 99999999998665 7999999999999999999
Q ss_pred cCCCCCHHHHHHHHHhcCeEEEEeecccccCCccccchHHHhhhCCCcEEEEcCCCCCCCCCCCcCcccHHHHhcccCCC
Q 004860 263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVLGAAPLKAIVLPAIGNDVGIPLREQDLSWKDFLSSVDYH 342 (727)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (727)
+.+.++.+++..+++....+++++.....+.+.... .. ........+|......+.-.
T Consensus 182 ~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~--------------------~~--~s~~k~v~~w~t~~~k~~~~ 239 (1363)
T KOG3628|consen 182 LSELSSSEELKDIVNPTPERVALTTEAGERAFINDN--------------------SP--VSLAKAVAWWKTNDFKGNYT 239 (1363)
T ss_pred chhhhhhhhhhcccCCCccceEeehhhhHHHhhhcc--------------------Cc--ccHHHHHHhhhcccccceee
Confidence 999999999999999999999998876442211100 00 00000001111000000000
Q ss_pred CCCCCCCCccCCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---------------hh-----chhcCCCCCCEEEE
Q 004860 343 PRPNYYSPVYNPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---------------EG-----WAHIDLKVGDVYCW 402 (727)
Q Consensus 343 ~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---------------~~-----~~~~~~~~~d~~l~ 402 (727)
......+.. .-. ..||-||++++|.--||+.+|+ ++...+ +. ...++....+.++.
T Consensus 240 ~~k~~~P~~--~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 240 KDKIKKPRM--QLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred hhhccCCce--eee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 000011111 112 7999999999999999999997 433221 11 11133444555655
Q ss_pred ecccccccch-HHhHHhhhcCcEEEEecCCC--ChhhHHHHHHHhCCCEEEechHHHHHHHhc-----------CCCCCC
Q 004860 403 PTNLGWVMGP-VILFSSFLNGATLALYQGSP--LERSFGKFVQDAGVTVLGTVPSLVKAWRNT-----------NCLEGL 468 (727)
Q Consensus 403 ~~~~~~~~~~-~~~~~~l~~G~~lv~~~~~~--~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~-----------~~~~~~ 468 (727)
.....-..|+ ..++.+|++|.|.+.++... .+..+..++.+++.+++..--..+++-... ......
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t~ 395 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKTP 395 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccCC
Confidence 5544444444 44889999999999998643 456788899999999887765555443221 011235
Q ss_pred CccceeEEEeecCCCChhhHHHHHhhCC---CC---c---------------ccccccccccccccccCCCC---C----
Q 004860 469 DWTKIRSFASTGETSNVDDDLWLSSKAW---YN---A---------------IIESCGGTELSSAYIQGSLL---Q---- 520 (727)
Q Consensus 469 ~l~~Lr~i~~gGe~l~~~~~~~~~~~~~---~~---~---------------l~n~YG~TE~~~~~~~~~~~---~---- 520 (727)
++++||.+++.-+.+..+..+....+.- +. + .+.+=+.+|.+....-.+.. .
T Consensus 396 d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e 475 (1363)
T KOG3628|consen 396 DLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGE 475 (1363)
T ss_pred CccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccc
Confidence 7899999999999888775433222210 10 0 01111223433221111000 0
Q ss_pred -----------------C-----ccccccccCCC-CceEEEECCC-CCcCCCCCCeeeeEEE-----ecccCCCCccccc
Q 004860 521 -----------------P-----QAFGAFSTATM-TAGLVILDEC-GVPYPDDQPCVGEVGL-----FPLYLGASDRLLN 571 (727)
Q Consensus 521 -----------------~-----~~~~~iG~p~~-~~~~~vld~~-~~~~p~G~~giGel~v-----~~~y~~~~~~~~~ 571 (727)
. ......|.-.+ ...+.|++++ .+.|..++ |||||| +.+|++-+.
T Consensus 476 ~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~e--VGEIwVsS~~~~~~~~al~~---- 549 (1363)
T KOG3628|consen 476 GLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTDE--VGEIWVSSNSLGKLFYALDK---- 549 (1363)
T ss_pred eeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccCc--ceeEEEecCCcccceeeccc----
Confidence 0 00011233333 3455666654 66778888 599999 344444322
Q ss_pred ccccccccccc------ccCCCceeeeeCceEEEecCceEEEEeecCCeee-cCceeechHHHHHH---------HhhcC
Q 004860 572 ADHEEVYFRGM------PMYKGMCLRRHGDIIKRTVGGYIIVQGRADDTMN-LGGIKTSSVEIERV---------CDQAD 635 (727)
Q Consensus 572 ~~~~~~~f~~~------p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik-~~G~ri~~~eIE~~---------l~~~~ 635 (727)
.|+.-|... +......+.|||=+|++.++ .++|+|-.+|++- ++|.+....+|-.. +.+..
T Consensus 550 --~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~g-ki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v 626 (1363)
T KOG3628|consen 550 --QTENTFKATPVESSGKPPSNVPFMRTGLLGFVHNG-KIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGV 626 (1363)
T ss_pred --cccceEEeeeccccCCCCccchhhhhcceeeeeCC-eEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhcc
Confidence 222233322 22233457899999999655 4667666666654 68887766554332 22456
Q ss_pred CCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCccc----ceEEEcCCCCCCCCchhhHH
Q 004860 636 ESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV----SLVKVVPEFPRTASNKLLRR 711 (727)
Q Consensus 636 p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P----~~i~~v~~lP~t~~GKvdR~ 711 (727)
+.|-++.|+- . ++.+..++-.+.. ..++-.++..+.++. +-..+.. -.++.-+.||||+-|-|.-.
T Consensus 627 ~~VF~~saf~------~-E~~~Vv~~esP~a--~e~~~~q~~~~v~q~-l~~iHqv~vyCilivP~~tLPrt~~~Gi~~~ 696 (1363)
T KOG3628|consen 627 IAVFDVSAFE------D-EHIVVVVLESPDA--TEENSFQWMSRVFQA-LDSIHQVGVYCILIVPANTLPRTPLGGIHNN 696 (1363)
T ss_pred ceEEEEeeee------c-ceEEEEEEeCcch--hhhhhhhHHHHHHHH-HHHHhcccceEEEEeccccCCCccccccccH
Confidence 6777776664 2 5555544434332 222222333332322 2222222 13344478999998889999
Q ss_pred HHHHHHhh
Q 004860 712 VLRDQIKH 719 (727)
Q Consensus 712 ~L~~~~~~ 719 (727)
..++.|.+
T Consensus 697 ~~k~~F~~ 704 (1363)
T KOG3628|consen 697 ECKQAFLE 704 (1363)
T ss_pred HHHHHHHc
Confidence 99988864
No 132
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=99.37 E-value=1.1e-12 Score=104.62 Aligned_cols=70 Identities=34% Similarity=0.428 Sum_probs=58.8
Q ss_pred HHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCccc--ceEEEcCC-CCC
Q 004860 626 EIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLFKV--SLVKVVPE-FPR 702 (727)
Q Consensus 626 eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~~P--~~i~~v~~-lP~ 702 (727)
|||++|. +||+|.+|+|++.+++..| ++++|||++ +. +.|+++++++||+||+| ..++.+++ ||+
T Consensus 1 EIE~~l~-~~~~V~~~~V~~~~d~~~g-~~l~a~vv~------~~----~~i~~~~~~~l~~~~~P~~~~~v~~~~~lP~ 68 (73)
T PF13193_consen 1 EIESVLR-QHPGVAEAAVVGVPDEDWG-ERLVAFVVL------DE----EEIRDHLRDKLPPYMVPRRIRFVRLDEELPR 68 (73)
T ss_dssp HHHHHHH-TSTTEEEEEEEEEEETTTE-EEEEEEEEE------HH----HHHHHHHHHHS-GGGS-SEEEEEEESSSEEB
T ss_pred CHHHHHh-cCCCccEEEEEEEEccccc-ccceeEEEe------ee----cccccchhhhCCCcceeeEEEEccccCcCCC
Confidence 8999995 9999999999999998888 999999998 22 45666688889999999 66666677 999
Q ss_pred CCCch
Q 004860 703 TASNK 707 (727)
Q Consensus 703 t~~GK 707 (727)
|+|||
T Consensus 69 t~~GK 73 (73)
T PF13193_consen 69 TPSGK 73 (73)
T ss_dssp ETTSS
T ss_pred CCCCC
Confidence 99999
No 133
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A.
Probab=99.05 E-value=3.7e-12 Score=106.90 Aligned_cols=84 Identities=18% Similarity=0.156 Sum_probs=52.7
Q ss_pred ChhHHHHHHHHhhhcCCCCCCCcchhhHHHhhhcccccCCCC------CccccCChhhhcccchHHHHHHhCCcccccc-
Q 004860 41 DAREIWRELVARKVLKPWHPHGLHQLVYYSVYNDWDASIKGP------PLYWFPSLDQSKLTNLGNALEIHGPKLLGRA- 113 (727)
Q Consensus 41 ~hq~~Pfe~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~- 113 (727)
+||+|||+. ||++|++.|..+.+|+ ||+||++++..... .....+.....+++||.+.+.+.++++.+.+
T Consensus 1 ~hq~~Pf~~-lv~~l~~~r~~~~~pl--fqv~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~l~~~~~~~~l~~~~~ 77 (91)
T PF13745_consen 1 EHQDYPFER-LVEALGPPRDPSRNPL--FQVMFNYQNFSQSALDLGGLRLEPIPLENGGAKFDLTLEVREDGDGLRLQLE 77 (91)
T ss_dssp -T--S-HHH-HHHHT-----TTS-SS---SEEEEEE----S----SSEEEEE-SS--SB-SSSEEEEEEE-SS-EEEEEE
T ss_pred CCccCCHHH-HHHHhCcccCCccccc--cCeEEEEEecccccccCCCceEEEeeccccceeeeEEEEEEecCCeEEEEEE
Confidence 699999999 9999999999999999 99999999875532 2223345567899999999999999999999
Q ss_pred cCCCCCCHHHHHHHHhhCH
Q 004860 114 YKDPITSFRLFQKFTVEHP 132 (727)
Q Consensus 114 y~~~~~~~~~~~~~ti~~~ 132 (727)
|++ ++|++.+|++|
T Consensus 78 Y~~-----~lf~~~ti~~~ 91 (91)
T PF13745_consen 78 YNT-----DLFSEETIERM 91 (91)
T ss_dssp EET-----TT--HHHHHHH
T ss_pred EEh-----HhCCHHHHhcC
Confidence 999 99999999875
No 134
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.91 E-value=4.9e-08 Score=102.60 Aligned_cols=236 Identities=17% Similarity=0.077 Sum_probs=128.2
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHh---hchhcCCCCCC--EEEEecccccccc-----hHHhHHhhhcC
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGD--VYCWPTNLGWVMG-----PVILFSSFLNG 422 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~---~~~~~~~~~~d--~~l~~~~~~~~~~-----~~~~~~~l~~G 422 (727)
.+++++..++.||||||.|--+.+.+..+...... ....+...... .++...|-..... .......+..+
T Consensus 86 ~~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~ 165 (365)
T PF04443_consen 86 VPEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFG 165 (365)
T ss_pred cChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccC
Confidence 34567778899999999986666665544433322 22222222222 2333333221111 11223334455
Q ss_pred cEEEEec-CCCChhhHHHHH----HHhCCCEEEechHHHHHHHhcCCCC--CCCcc-ceeEEEeec------CCCChh-h
Q 004860 423 ATLALYQ-GSPLERSFGKFV----QDAGVTVLGTVPSLVKAWRNTNCLE--GLDWT-KIRSFASTG------ETSNVD-D 487 (727)
Q Consensus 423 ~~lv~~~-~~~~~~~l~~~i----~~~~vt~l~~~P~~l~~l~~~~~~~--~~~l~-~Lr~i~~gG------e~l~~~-~ 487 (727)
.. .... ...+.+.+.+.+ .+.++..+++.|.++-.++...... ...|+ ..+.+-.|| |.++.+ .
T Consensus 166 ~~-~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef 244 (365)
T PF04443_consen 166 SR-FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEF 244 (365)
T ss_pred ce-eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHH
Confidence 55 3333 234555555444 3556778888888666655432222 22333 344444444 345543 3
Q ss_pred HHHHHhhCCC---CcccccccccccccccccCCCCCCccccccccCCCCceEEEECC-CCCcCCCCCCeeeeEEEecccC
Q 004860 488 DLWLSSKAWY---NAIIESCGGTELSSAYIQGSLLQPQAFGAFSTATMTAGLVILDE-CGVPYPDDQPCVGEVGLFPLYL 563 (727)
Q Consensus 488 ~~~~~~~~~~---~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~-~~~~~p~G~~giGel~v~~~y~ 563 (727)
.+.+.+.++- ..+++.||+||.......+.... .++|.. +.|.|+ +.+++|.|+. |-|.+-..+.
T Consensus 245 ~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~--------~~~p~w-V~iRDp~tl~~~~~Ge~--Gli~vidl~~ 313 (365)
T PF04443_consen 245 YARLQEVFGVIPIENIYDMYGMTELNSQAYECGHGH--------FHVPPW-VIIRDPETLEPLPPGET--GLIQVIDLAN 313 (365)
T ss_pred HHHHHHHHCCCCHHHeeeeeeccccchhheeCCCCc--------ccCCCe-EEEECCCCCcCCCCCCe--eEEEEEcccc
Confidence 4555555532 36999999999876544332111 123323 777785 5789999986 7777633322
Q ss_pred CCCccccccccccccccccccCCCceeeeeCceEEEecC--------ceEEEEeecCCeeecCceee
Q 004860 564 GASDRLLNADHEEVYFRGMPMYKGMCLRRHGDIIKRTVG--------GYIIVQGRADDTMNLGGIKT 622 (727)
Q Consensus 564 ~~~~~~~~~~~~~~~f~~~p~~~g~~~yrTGDl~~~~~d--------G~l~~~GR~dd~ik~~G~ri 622 (727)
.. .++ ..-|.|+|.+..+ .++.++||.+. -.+||-..
T Consensus 314 ~s-------------------~p~--~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~-ae~RGCs~ 358 (365)
T PF04443_consen 314 TS-------------------YPG--FILTEDLGVLHGDDDCGCRKGKYFEVLGRADG-AEIRGCSL 358 (365)
T ss_pred cC-------------------CCc--EEEEcceeeecCCCCCCCccCCEEEEEeCCCC-CccCCcHH
Confidence 11 112 2459999988654 27999999874 23566544
No 135
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.38 E-value=5.3e-06 Score=92.50 Aligned_cols=74 Identities=22% Similarity=0.270 Sum_probs=50.1
Q ss_pred eeeCceEEEec--Cc--eEEEEeecCCeeecCceeechHHHHHHHhhc----CCCceeeEEEeecCCCCCceEEEEEEEe
Q 004860 591 RRHGDIIKRTV--GG--YIIVQGRADDTMNLGGIKTSSVEIERVCDQA----DESILETAAISVSPAGGGPEVLVIFVVL 662 (727)
Q Consensus 591 yrTGDl~~~~~--dG--~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~----~p~V~~a~vv~~~~~~~~~~~l~a~vv~ 662 (727)
|+.||+++... ++ .|+|+||.+.++++.|+++.-.+|+.++.+. .-.+.+..+......... ..-+.|+.+
T Consensus 371 Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~~~~~~~-~~Y~~~~e~ 449 (528)
T PF03321_consen 371 YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPDPSSGNP-PHYVLFWEL 449 (528)
T ss_dssp EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE--SSSS-BEEEEEEEE
T ss_pred eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEeecccCCC-CceEEEEEe
Confidence 89999999853 44 7999999999999999999999999999643 233556555544222232 566667777
Q ss_pred cCC
Q 004860 663 KKG 665 (727)
Q Consensus 663 ~~~ 665 (727)
...
T Consensus 450 ~~~ 452 (528)
T PF03321_consen 450 EGE 452 (528)
T ss_dssp CS-
T ss_pred CCC
Confidence 653
No 136
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.82 E-value=0.0011 Score=74.22 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=38.6
Q ss_pred eeeeCceEEEec----CceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 590 LRRHGDIIKRTV----GGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 590 ~yrTGDl~~~~~----dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
-|+.||.+++.. --.|.|+||.+.++++.|+++.-.+++.+|.+
T Consensus 409 RY~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 409 RYRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred EeecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 389999999853 34799999999999999999999999998863
No 137
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.67 E-value=0.0052 Score=68.31 Aligned_cols=44 Identities=18% Similarity=0.262 Sum_probs=37.9
Q ss_pred eeeeCceEEEe----cCceEEEEeecCCeeecCceeechHHHHHHHhh
Q 004860 590 LRRHGDIIKRT----VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDQ 633 (727)
Q Consensus 590 ~yrTGDl~~~~----~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~ 633 (727)
-||.||+++.. .--.+.|++|.+.+..+.|.+.+-.++-.++.+
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 38999999874 456799999999999999999999999888753
No 138
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=97.62 E-value=0.00025 Score=59.52 Aligned_cols=86 Identities=24% Similarity=0.377 Sum_probs=56.3
Q ss_pred ceeechHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCC---ChHHHHHHHHHHHHhhcCCCcccceEE
Q 004860 619 GIKTSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTS---QPDKLKMIFSKAIQSKLNPLFKVSLVK 695 (727)
Q Consensus 619 G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~---~~~~l~~~l~~~l~~~L~~~~~P~~i~ 695 (727)
|.+|+|..||++|. ++|++....-+.+...... +.+...|.+.++... +.+++.+.|.+.+++.|. ..| .+.
T Consensus 1 GvnvfP~~Ie~vl~-~~~~~~~~y~i~v~~~~~~-D~l~v~vE~~~~~~~~~~~~~~l~~~i~~~lk~~lg--v~~-~V~ 75 (96)
T PF14535_consen 1 GVNVFPSQIEEVLR-EFPEVSPEYQIVVTREGGL-DELTVRVELRPGFSDDAEDLEALAERIAERLKERLG--VRP-EVE 75 (96)
T ss_dssp TEEE-HHHHHHHHC-TSTTEEEEEEEEEEEETTE-EEEEEEEEESTTCCTTHHHHHHHHHHHHHHHHHHHS--S-E-EEE
T ss_pred CcEECHHHHHHHHH-hCcCCCCcEEEEEEcCCCC-cEEEEEEEECCccCcchHHHHHHHHHHHHHHHhhcC--ceE-EEE
Confidence 88999999999995 8999994444444333333 788888998886432 347788888888988886 233 444
Q ss_pred Ec--CCCCCCCCchhhH
Q 004860 696 VV--PEFPRTASNKLLR 710 (727)
Q Consensus 696 ~v--~~lP~t~~GKvdR 710 (727)
++ .+||++ .||..|
T Consensus 76 lv~~gtLpr~-~~K~~R 91 (96)
T PF14535_consen 76 LVPPGTLPRS-EGKAKR 91 (96)
T ss_dssp EE-TT-S----SSSS-S
T ss_pred EECCCCccCC-CCcceE
Confidence 44 589997 678654
No 139
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.51 E-value=0.017 Score=64.50 Aligned_cols=43 Identities=16% Similarity=0.162 Sum_probs=37.7
Q ss_pred eeeeCceEEE----ecCceEEEEeecCCeeecCceeechHHHHHHHh
Q 004860 590 LRRHGDIIKR----TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCD 632 (727)
Q Consensus 590 ~yrTGDl~~~----~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~ 632 (727)
-||.||+.+. +.--.+.|++|.+.+..+.|.+..-.++-.++.
T Consensus 416 RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~ 462 (606)
T PLN02247 416 RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVT 462 (606)
T ss_pred EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHH
Confidence 3899999986 345689999999999999999999999988885
No 140
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=90.70 E-value=1 Score=48.23 Aligned_cols=82 Identities=16% Similarity=0.088 Sum_probs=68.8
Q ss_pred ceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEE
Q 004860 208 NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGI 284 (727)
Q Consensus 208 ~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~--~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~i 284 (727)
--+|..++...+..+|+.|... ..+||+|.++..-+. .-+-.-+|+.++|++++|+.+.. -++-..++++.++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g~-~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGGN-TERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCcc-HHHHHHHHHhcCCcEE
Confidence 4689999999999999999999 999999998876221 11567889999999999998844 4566779999999999
Q ss_pred Eeeccc
Q 004860 285 FTQDFI 290 (727)
Q Consensus 285 l~~~~~ 290 (727)
.+..++
T Consensus 187 ~~tps~ 192 (438)
T COG1541 187 AATPSY 192 (438)
T ss_pred EEChHH
Confidence 998864
No 141
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=74.86 E-value=15 Score=39.71 Aligned_cols=89 Identities=17% Similarity=0.096 Sum_probs=65.5
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.||.+|++. =.+-.+|.+.+...+ .......+++++|++....+-+... +..+++++..|+..+.++.
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~-~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEF-VVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHH-HHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCcccee-eeeeccccccccccccccc
Confidence 567888876 134567877764433 3334467899999988777665332 3447788999999999987
Q ss_pred CCChhhHHHHHHHhCCCEEEe
Q 004860 431 SPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~ 451 (727)
....+.+...+++.+++++++
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 777889999999999999996
No 142
>PLN02736 long-chain acyl-CoA synthetase
Probab=74.00 E-value=37 Score=39.55 Aligned_cols=119 Identities=12% Similarity=-0.077 Sum_probs=79.0
Q ss_pred CCCCeEEEE--eCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEe
Q 004860 354 PVDAVVNIL--FSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (727)
Q Consensus 354 ~~~~~a~ii--~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~ 428 (727)
.|+.+++.. ...|.+|. -..+|.+.+... +.......++.++|++...++-+.... ...++++..|+.++.+
T Consensus 57 ~p~~~al~~~~~~~~~~~~--~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl 133 (651)
T PLN02736 57 FRDYKYLGTRIRVDGTVGE--YKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPL 133 (651)
T ss_pred CCCCCeEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEe
Confidence 456666532 12333222 234677766543 334445679999999988776655433 3357888999999988
Q ss_pred cCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEee
Q 004860 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFAST 479 (727)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~g 479 (727)
.....++.+...+++.+++++++.+..+..+..... .++.++.+++-
T Consensus 134 ~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~----~~~~l~~ii~~ 180 (651)
T PLN02736 134 YDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLS----EIPSVRLIVVV 180 (651)
T ss_pred ecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhh----cCCCceEEEEE
Confidence 777778899999999999999999887766654321 23456666554
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=71.07 E-value=18 Score=35.68 Aligned_cols=77 Identities=17% Similarity=0.126 Sum_probs=56.2
Q ss_pred CCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEeecC
Q 004860 188 KEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~--~~vva~lA~~kaGa~~vpl~ 264 (727)
..+|.+|++.... -.|.+.+...+ ... +.++|++. .+|-.- .+...+++++.+|++.+.+
T Consensus 147 ~~~~D~a~l~yTs--------g~~~~~~~~~~-------~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~- 209 (227)
T TIGR03089 147 PDATAPALVAGGG--------EWTGAELVAAA-------RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV- 209 (227)
T ss_pred CCCCcceeeeccc--------cccHHHHHHHH-------hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-
Confidence 3457888876654 23544443322 445 88999999 888654 4556789999999998887
Q ss_pred CCCCHHHHHHHHHhcCe
Q 004860 265 DSFAAREIATRLRVSKA 281 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~ 281 (727)
+.+.++++-..+++.++
T Consensus 210 ~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 210 THPDPARLDQIAETERV 226 (227)
T ss_pred cCCCHHHHHHHHHhhcC
Confidence 79999999988887765
No 144
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=69.60 E-value=24 Score=38.82 Aligned_cols=94 Identities=13% Similarity=0.172 Sum_probs=66.2
Q ss_pred CceEEEEecCCCCCCcc--ceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH--HHHHHHHHHHhCCEEeecCC
Q 004860 191 NTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR--AVIIYLAIILAGYVVVSIAD 265 (727)
Q Consensus 191 d~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~--~vva~lA~~kaGa~~vpl~p 265 (727)
+.++.++... |.+|.. .-+|..++...+...++.+... +++||++.++.+.+.. .....+++.+.|+..+|...
T Consensus 86 ~~i~~i~~TS-GTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~ 164 (445)
T TIGR03335 86 KDIYTIHETS-GTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK 164 (445)
T ss_pred HHeEEEEeCC-CCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc
Confidence 4555554332 222332 3578899998888889888888 9999999998876643 22445788999998887643
Q ss_pred CCCHHHHHHHHHhcCeEEEEeec
Q 004860 266 SFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 266 ~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
.+....++++.++.+++...
T Consensus 165 ---~~~~~~~i~~~~~t~l~~~p 184 (445)
T TIGR03335 165 ---CTFPIRIIESYRPTGIVASV 184 (445)
T ss_pred ---hhHHHHHHHHhCCCEEEECH
Confidence 23456788999999887654
No 145
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=66.31 E-value=28 Score=37.90 Aligned_cols=80 Identities=15% Similarity=0.059 Sum_probs=61.0
Q ss_pred eecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEE
Q 004860 209 LMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285 (727)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~--~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il 285 (727)
.+|...+......+++.+... +++||++....+.+. ......++..+.|+..+++.+.. .+++...|++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 467777777767777778777 999999987665442 22334677889999999987765 47788899999999998
Q ss_pred eecc
Q 004860 286 TQDF 289 (727)
Q Consensus 286 ~~~~ 289 (727)
....
T Consensus 173 ~~Ps 176 (422)
T TIGR02155 173 VTPS 176 (422)
T ss_pred EcHH
Confidence 8764
No 146
>PRK09274 peptide synthase; Provisional
Probab=65.24 E-value=29 Score=39.27 Aligned_cols=99 Identities=12% Similarity=0.037 Sum_probs=65.9
Q ss_pred CCCCeEEEEeCCCCC-CCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTT-GEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGST-G~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~ 429 (727)
.|+.+|++....+++ ...+-..+|.+.+...+ .......++.++|++...++-+.... ..+++++..|+..+..+
T Consensus 19 ~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~-~~~la~~~~G~~~v~l~ 97 (552)
T PRK09274 19 RPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFF-ALTFALFKAGAVPVLVD 97 (552)
T ss_pred CCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHH-HHHHHHHHcCeEEEEcC
Confidence 346666554332221 22233357877764433 33344578999999988877665433 33678899999988887
Q ss_pred CCCChhhHHHHHHHhCCCEEEech
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P 453 (727)
.....+.+...+++.++..+...+
T Consensus 98 ~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 98 PGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCccHHHHHHHHHhcCCCEEEecc
Confidence 666677888899999999888754
No 147
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=63.58 E-value=52 Score=36.69 Aligned_cols=97 Identities=9% Similarity=-0.057 Sum_probs=68.8
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++. . +..+|.+.+... +.......++.++|++....+-+.+.- ..+++++..|+..+..+.
T Consensus 18 ~~~~~a~~~--~-------~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~-~~~la~~~~G~~~v~l~~ 87 (513)
T PRK07656 18 FGDKEAYVF--G-------DQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWV-IAALGALKAGAVVVPLNT 87 (513)
T ss_pred CCCCeEEEe--C-------CCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCc
Confidence 346666654 1 224777776443 333334568899999988877665433 346788999999988876
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (727)
......+.+.+++.+++.+++.+.....+.
T Consensus 88 ~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~ 117 (513)
T PRK07656 88 RYTADEAAYILARGDAKALFVLGLFLGVDY 117 (513)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhHHHHH
Confidence 667788999999999999998887665543
No 148
>PLN03052 acetate--CoA ligase; Provisional
Probab=63.13 E-value=46 Score=39.33 Aligned_cols=99 Identities=13% Similarity=0.083 Sum_probs=69.9
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.++.+|++.-..|..|.+ ...+|.+.+.. .+.......++.++|++..+++-+..+- ..+++++..|+..+.+..
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~v-ia~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAV-IIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHcCCEEEeeCC
Confidence 457777654332221222 24578877644 3344445678999999999888765543 336788999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
...++.+...+++.++.++++...
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 777889999999999999888654
No 149
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=61.60 E-value=39 Score=38.23 Aligned_cols=97 Identities=20% Similarity=0.138 Sum_probs=68.4
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++..- ++.++...+|.+.+...+ .......++.++|++...++-+... ...+|+++..|+..+..+.
T Consensus 37 ~p~~~A~~~~~---~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~ 112 (547)
T PRK13295 37 CPDKTAVTAVR---LGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMP 112 (547)
T ss_pred CCCceEEEecC---CCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEecccc
Confidence 45677776532 233444567888765433 3334456899999999888776654 3447788999999887776
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
....+.+...++..+++.+.+...
T Consensus 113 ~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 113 IFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred ccCHHHHHHHHHhcCceEEEEecc
Confidence 666778889999999998877553
No 150
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=61.21 E-value=48 Score=38.45 Aligned_cols=97 Identities=16% Similarity=0.055 Sum_probs=69.1
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.... . ......+|.+.+...+ .......++.++|++...++-+...-. .+++++..|+..+..+.
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~-~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAV-AMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCCEEEecCC
Confidence 467777764221 1 1135668888775543 333445789999999988877655433 36788999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
......+...++..++.++++...
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 777788999999999999987543
No 151
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=60.43 E-value=64 Score=36.74 Aligned_cols=99 Identities=17% Similarity=0.121 Sum_probs=70.1
Q ss_pred CCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCC
Q 004860 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (727)
Q Consensus 355 ~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~ 431 (727)
++.+|.+.-. .+ ....+|.+.+...+ .......++.++|++...++-+.... ..+|+++..|+..+..+..
T Consensus 58 ~~~~a~~~~~-~~----~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~vpl~~~ 131 (570)
T PRK04319 58 KDKVALRYLD-AS----RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELY-FALLGALKNGAIVGPLFEA 131 (570)
T ss_pred CCceEEEEEC-CC----CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHcCcEEcccccc
Confidence 4666654432 11 23467887765443 33344678999999988877665533 3467889999998888766
Q ss_pred CChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 432 PLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
..+..+...++..+++.+...+..+..+
T Consensus 132 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 159 (570)
T PRK04319 132 FMEEAVRDRLEDSEAKVLITTPALLERK 159 (570)
T ss_pred cCHHHHHHHHHccCCcEEEEChhhhhcc
Confidence 7778899999999999999988876544
No 152
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=60.43 E-value=49 Score=38.19 Aligned_cols=97 Identities=18% Similarity=0.092 Sum_probs=69.0
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.... .+| ..-.+|.+.+... +.......++.++|++..+++-+...- ..+++++..|+..+....
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAA-IAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEeccCC
Confidence 467777764322 122 2456788776443 334445678999999998887665433 346788999999888877
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
...++.+...++..+++++++...
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 777788999999999999987654
No 153
>PF09580 Spore_YhcN_YlaJ: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ); InterPro: IPR019076 This entry contains YhcN and YlaJ, which are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic, 40-residue C-terminal domain.
Probab=60.34 E-value=38 Score=31.81 Aligned_cols=56 Identities=13% Similarity=0.091 Sum_probs=41.0
Q ss_pred hHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCC
Q 004860 624 SVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNP 687 (727)
Q Consensus 624 ~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~ 687 (727)
...|+..+. ..|+|.+|.|+...+ ..+||+-+ +.. ....+++++.+++.+++..|.
T Consensus 77 a~~i~~~v~-~~~~V~~A~vvv~~~-----~a~Vav~~-~~~-~~~~~~i~~~V~~~v~~~~p~ 132 (177)
T PF09580_consen 77 ADRIANRVK-KVPGVEDATVVVTDD-----NAYVAVDL-DFN-RFNTKKIKKKVEKAVKSADPR 132 (177)
T ss_pred HHHHHHHHh-cCCCceEEEEEEECC-----EEEEEEEe-ccc-ccchhHHHHHHHHHHHHhCCC
Confidence 467888885 899999999998642 55555544 322 345578888999889887776
No 154
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=59.75 E-value=59 Score=37.79 Aligned_cols=95 Identities=13% Similarity=-0.057 Sum_probs=68.0
Q ss_pred CCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCC
Q 004860 355 VDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGS 431 (727)
Q Consensus 355 ~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~ 431 (727)
++.+|++.-.-+ .+ ....+|.+.+.. .+.......++.+||++..+++-+-... ..+|+++..|+..+.+...
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~-~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPL-IAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCCC
Confidence 466666542211 11 235688887644 3444445679999999999888775543 3367889999999888777
Q ss_pred CChhhHHHHHHHhCCCEEEech
Q 004860 432 PLERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 432 ~~~~~l~~~i~~~~vt~l~~~P 453 (727)
..++.+...|++.+++++++..
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 7788999999999999998754
No 155
>PLN02246 4-coumarate--CoA ligase
Probab=59.48 E-value=50 Score=37.26 Aligned_cols=98 Identities=14% Similarity=0.031 Sum_probs=67.8
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.. . ++-.+|++.+...+ .......++.++|++...++-+... +..+|+++..|++.+..+.
T Consensus 36 ~~~~~a~~~~---~----~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDG---A----TGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF-VLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEec---C----CCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHHcCEEEecCCC
Confidence 4567776532 1 12357888764433 3333457899999998887666443 2336788889999988877
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
......+...++..++..+.........+
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 136 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDKL 136 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHHH
Confidence 66778899999999999888766554433
No 156
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=59.02 E-value=55 Score=36.49 Aligned_cols=84 Identities=15% Similarity=-0.033 Sum_probs=62.4
Q ss_pred ecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEec
Q 004860 376 WTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTV 452 (727)
Q Consensus 376 ~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~ 452 (727)
+|.+.+...+ .......++++++++....+-+... +..+++++..|+..+..+.......+...+++.++..++..
T Consensus 32 ~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~ 110 (521)
T PRK06187 32 TTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEY-LEAYFAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVD 110 (521)
T ss_pred EcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEc
Confidence 7877764433 3333457889999999888776643 34477899999999888766677889999999999999888
Q ss_pred hHHHHHHH
Q 004860 453 PSLVKAWR 460 (727)
Q Consensus 453 P~~l~~l~ 460 (727)
......+.
T Consensus 111 ~~~~~~~~ 118 (521)
T PRK06187 111 SEFVPLLA 118 (521)
T ss_pred chHHHHHH
Confidence 77665543
No 157
>PLN02654 acetate-CoA ligase
Probab=58.82 E-value=59 Score=38.00 Aligned_cols=97 Identities=13% Similarity=0.045 Sum_probs=68.5
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.++.+|++.... ..| ....+|.+.+... +.......++++||++..+++-+.... ..+++++..|+..+.+..
T Consensus 102 ~~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v-~a~lA~~~~Gav~vpv~~ 177 (666)
T PLN02654 102 NGDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELP-IAMLACARIGAVHSVVFA 177 (666)
T ss_pred CCCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEecCC
Confidence 356677653221 111 2356788877543 334445679999999998887765433 346788999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
...++.+...|+..++.++++...
T Consensus 178 ~~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 178 GFSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 777889999999999999887654
No 158
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=58.75 E-value=61 Score=37.72 Aligned_cols=96 Identities=14% Similarity=-0.083 Sum_probs=67.9
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.++.+|++.... .| ....+|.+.+... +.......++.++|++..+++-+.... ..+++++..|+..+.++.
T Consensus 97 ~~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v-~~~lA~~~~Gav~v~l~~ 171 (655)
T PRK03584 97 RDDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETV-VAMLATASLGAIWSSCSP 171 (655)
T ss_pred CCCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCcEEEeeCC
Confidence 356777654322 22 1356788776543 333445578999999998887665543 347788999999998877
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
....+.+...++..++.++++...
T Consensus 172 ~~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 172 DFGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCCHHHHHHHHHHcCCcEEEEccc
Confidence 777788999999999998887653
No 159
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=58.56 E-value=56 Score=37.77 Aligned_cols=96 Identities=15% Similarity=0.046 Sum_probs=67.2
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++. .+..+|. .-.+|.+.+.. .+.......++.++|++..+++-+.... ..+++++..|+..+....
T Consensus 66 ~p~~~A~~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~-~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIA-VSTETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAA-FAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCcEEEeeCC
Confidence 457777654 3322232 34567777644 3334445679999999998887664433 346788999999888877
Q ss_pred CCChhhHHHHHHHhCCCEEEech
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (727)
......+...|+..++.++++..
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 77778899999999999988754
No 160
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=58.06 E-value=57 Score=36.51 Aligned_cols=101 Identities=15% Similarity=0.055 Sum_probs=68.9
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.... .|.. -.+|.+.+...+ .......++.++|++....+-+.... ..+++++..|+..+..+.
T Consensus 20 ~p~~~a~~~~~~--~~~~--~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGVV--RRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCcc--ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCc
Confidence 457777654321 1211 246776664433 33334578999999988877665443 336688899999888877
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
...++.+...+++.+++.++..+.....+
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 77778899999999999998887655443
No 161
>PRK07514 malonyl-CoA synthase; Validated
Probab=58.06 E-value=60 Score=36.11 Aligned_cols=86 Identities=13% Similarity=0.049 Sum_probs=63.2
Q ss_pred eEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEE
Q 004860 373 AIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (727)
Q Consensus 373 gV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (727)
+..+|...+.. .+.......++.++|++....+-+... +..+++++..|+..+..+.......+...++..+++++
T Consensus 26 ~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~-~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i 104 (504)
T PRK07514 26 GLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA-LALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALV 104 (504)
T ss_pred CCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEE
Confidence 34677776644 333444457899999998887766433 34467889999999888777777889999999999999
Q ss_pred EechHHHHHH
Q 004860 450 GTVPSLVKAW 459 (727)
Q Consensus 450 ~~~P~~l~~l 459 (727)
...+.....+
T Consensus 105 i~~~~~~~~~ 114 (504)
T PRK07514 105 VCDPANFAWL 114 (504)
T ss_pred EEccchhHHH
Confidence 8887765543
No 162
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=57.67 E-value=56 Score=36.93 Aligned_cols=84 Identities=12% Similarity=-0.022 Sum_probs=63.5
Q ss_pred EecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechH
Q 004860 375 PWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 375 ~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
.+|.+.+...+......+.-.++|++...++-+..+. ..+|+++..|+..+.++.....+++...++..+++++.+...
T Consensus 45 ~~Ty~el~~~~~~lA~~L~~~~gd~Val~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~ 123 (539)
T PRK06334 45 KLSYNQVRKAVIALATKVSKYPDQHIGIMMPASAGAY-IAYFATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQ 123 (539)
T ss_pred cccHHHHHHHHHHHHHHHhhccCCeEEEEcCCchHHH-HHHHHHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHH
Confidence 3788887766665555554468999988887766543 336789999999988876666788999999999999988776
Q ss_pred HHHHH
Q 004860 455 LVKAW 459 (727)
Q Consensus 455 ~l~~l 459 (727)
.+..+
T Consensus 124 ~~~~~ 128 (539)
T PRK06334 124 LMQHL 128 (539)
T ss_pred HHHHH
Confidence 65544
No 163
>PRK05857 acyl-CoA synthetase; Validated
Probab=57.22 E-value=47 Score=37.55 Aligned_cols=94 Identities=11% Similarity=-0.002 Sum_probs=67.0
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|.+.. .| ...+|.+.+...+. ......++.+++++..+++-++..-. .+|+++..|+..+..+.
T Consensus 27 ~p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~-~~lA~~~~G~v~v~l~~ 98 (540)
T PRK05857 27 QPEAIALRRC-DG------TSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYL-SVLACAKLGAIAVMADG 98 (540)
T ss_pred CCCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHH-HHHHHHHcCeEEEecCc
Confidence 4667766532 22 14578877654333 33345689999999988877765443 37788999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSL 455 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~ 455 (727)
....+.+...++..++..++..+..
T Consensus 99 ~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 99 NLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred cCCHHHHHHHHHhcCCceEEEeccc
Confidence 6677889899999999888877653
No 164
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=57.15 E-value=62 Score=38.03 Aligned_cols=102 Identities=11% Similarity=-0.004 Sum_probs=72.4
Q ss_pred EEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
..+|.+.+...+ .......++.++|++..+++-+... +...++++..|+..|-......++.+...+++.++++++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li 183 (696)
T PLN02387 105 EWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVI 183 (696)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEE
Confidence 446777664433 3334467899999998877655442 233678899999999887777788999999999999999
Q ss_pred echHHHHHHHhcCCCCCCCccceeEEEeec
Q 004860 451 TVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (727)
Q Consensus 451 ~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gG 480 (727)
+....+..+..... .+++++.+++-+
T Consensus 184 ~~~~~~~~l~~~~~----~~~~l~~ii~~~ 209 (696)
T PLN02387 184 CDSKQLKKLIDISS----QLETVKRVIYMD 209 (696)
T ss_pred ECHHHHHHHHHHhh----ccCCceEEEEEC
Confidence 98888777655321 234566665544
No 165
>PRK07798 acyl-CoA synthetase; Validated
Probab=56.80 E-value=72 Score=35.72 Aligned_cols=86 Identities=12% Similarity=-0.068 Sum_probs=61.4
Q ss_pred EEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
-.+|...+.. .+.......++.++|++...++-+.+. +..+|+++..|+..+..+.......+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 3577777643 333444457899999988877655432 233678889999988887666778899999999999998
Q ss_pred echHHHHHHH
Q 004860 451 TVPSLVKAWR 460 (727)
Q Consensus 451 ~~P~~l~~l~ 460 (727)
........+.
T Consensus 106 ~~~~~~~~~~ 115 (533)
T PRK07798 106 YEREFAPRVA 115 (533)
T ss_pred EchhhHHHHH
Confidence 8776554443
No 166
>PRK06839 acyl-CoA synthetase; Validated
Probab=56.30 E-value=69 Score=35.49 Aligned_cols=96 Identities=15% Similarity=0.020 Sum_probs=68.3
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc----hhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~ 429 (727)
.|+.+|.+. .+..+|++.+...+.... ..+++.+++++...++-+... +..+|+++..|+..+..+
T Consensus 15 ~p~~~a~~~---------~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~ 84 (496)
T PRK06839 15 HPDRIAIIT---------EEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLN 84 (496)
T ss_pred CCCCeEEEE---------CCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecC
Confidence 456666662 145678887755443332 236789999998877766543 334678888999988887
Q ss_pred CCCChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
....+..+...+++.+++.++..+.....+
T Consensus 85 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 114 (496)
T PRK06839 85 IRLTENELIFQLKDSGTTVLFVEKTFQNMA 114 (496)
T ss_pred cccCHHHHHHHHHhcCceEEEEcHHHHHHH
Confidence 666777888899999999999887766544
No 167
>PLN03102 acyl-activating enzyme; Provisional
Probab=56.27 E-value=55 Score=37.39 Aligned_cols=94 Identities=14% Similarity=0.030 Sum_probs=66.6
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHh---hchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|.+. .+ -.+|.+.+...+.. .....++.++|++...++-+.... ..+|+++..|++++..+.
T Consensus 27 ~p~~~Al~~--~~-------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~-~~~la~~~~G~~~vpl~~ 96 (579)
T PLN03102 27 YPNRTSIIY--GK-------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMY-EMHFAVPMAGAVLNPINT 96 (579)
T ss_pred CCCCeEEEE--CC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEeeccc
Confidence 456677653 11 24777776544433 334568999999988877654332 336788999999888887
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (727)
....+.+...+++.+++.+++.+....
T Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (579)
T PLN03102 97 RLDATSIAAILRHAKPKILFVDRSFEP 123 (579)
T ss_pred cCCHHHHHHHHhccCCeEEEEChhhHH
Confidence 777889999999999999988765443
No 168
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=54.42 E-value=1.3e+02 Score=35.72 Aligned_cols=118 Identities=10% Similarity=-0.001 Sum_probs=78.0
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhh---chh---cCCCCC-----------CEEEEecccccccchHHhH
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAH---IDLKVG-----------DVYCWPTNLGWVMGPVILF 416 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~---~~~---~~~~~~-----------d~~l~~~~~~~~~~~~~~~ 416 (727)
.|+.+|++.... |.+ ...+|.+.+...+... ... .|+.++ |++..+++-+.. .+...+
T Consensus 74 ~p~~~Al~~~~~---g~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~e-w~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSC---GEP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSIN-WLVADL 148 (746)
T ss_pred cCCceeEeccCC---CCC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHH-HHHHHH
Confidence 457777764322 221 2357777664433322 222 478887 888777665432 233467
Q ss_pred HhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHHHhcCCCCCCCccceeEEEeec
Q 004860 417 SSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTG 480 (727)
Q Consensus 417 ~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gG 480 (727)
+++..|++.|-......++.+...+++-++.++++.+..+..+.... ..++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~----~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK----NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh----ccCCCceEEEEEC
Confidence 88999999998877778889999999999999999888877776532 1245677666544
No 169
>PRK08316 acyl-CoA synthetase; Validated
Probab=54.17 E-value=70 Score=35.73 Aligned_cols=86 Identities=13% Similarity=0.085 Sum_probs=63.5
Q ss_pred EEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
..+|...+...+. ......++.++|++...++-+... +..+++++..|+..+..+.....+.+...+++.++.+++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAY-ALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 4577777644433 333446889999998887776653 344778899999988887666778889999999999998
Q ss_pred echHHHHHHH
Q 004860 451 TVPSLVKAWR 460 (727)
Q Consensus 451 ~~P~~l~~l~ 460 (727)
........+.
T Consensus 114 ~~~~~~~~~~ 123 (523)
T PRK08316 114 VDPALAPTAE 123 (523)
T ss_pred EccchHHHHH
Confidence 8877665543
No 170
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=54.08 E-value=51 Score=35.76 Aligned_cols=108 Identities=14% Similarity=0.038 Sum_probs=72.3
Q ss_pred eEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEE
Q 004860 373 AIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (727)
Q Consensus 373 gV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (727)
|+..|-+.++.. +++....+|+.+|||+....|-+ .......+++-.+|..++...+..-..++.-.+++.++.++
T Consensus 75 g~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~-~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l 153 (596)
T KOG1177|consen 75 GIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNS-YEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKAL 153 (596)
T ss_pred cchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCCh-HHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEE
Confidence 455676666543 33444578999999998766533 33333356777788887776554445667778999999999
Q ss_pred EechHHHHH-----HHhc---------CCCCCCCccceeEEEeecC
Q 004860 450 GTVPSLVKA-----WRNT---------NCLEGLDWTKIRSFASTGE 481 (727)
Q Consensus 450 ~~~P~~l~~-----l~~~---------~~~~~~~l~~Lr~i~~gGe 481 (727)
+.+|.+... |.+. +..+...++.|+.++..+|
T Consensus 154 ~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 154 FAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 999876433 3332 1233456889999999884
No 171
>PLN02574 4-coumarate--CoA ligase-like
Probab=53.64 E-value=72 Score=36.23 Aligned_cols=99 Identities=21% Similarity=0.156 Sum_probs=67.7
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchh-cCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~ 429 (727)
.++.++++- +.+|. .+|.+.+.. .+...... .++.++|++....+-+... +..+|+++..|+..+..+
T Consensus 52 ~~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALID---SSTGF----SISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcC
Confidence 456666653 22221 367776533 33333344 7899999998887755433 334678899999998887
Q ss_pred CCCChhhHHHHHHHhCCCEEEechHHHHHHH
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (727)
.......+...+++.++..++..+..+..+.
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 154 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKLS 154 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHHH
Confidence 6667778888999999998888877665543
No 172
>PRK07788 acyl-CoA synthetase; Validated
Probab=52.95 E-value=55 Score=37.06 Aligned_cols=84 Identities=14% Similarity=0.058 Sum_probs=62.7
Q ss_pred EecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+ .......++.++|++...++-+.. .+..+|+++..|+..+..+.....+.+...+++.+++.+..
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~-~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRG-FVLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 47777764433 333445689999999887755433 23447789999999999987777788999999999999998
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766554
No 173
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=52.79 E-value=53 Score=42.18 Aligned_cols=99 Identities=16% Similarity=0.043 Sum_probs=67.6
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++...+...+......+|++.+... +.......++.+++++..+++-+.... ..+++++..|+..+.++.
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i-~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLV-VAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHH-HHHHHHHhhCcEEeccCC
Confidence 4677777643322111112346788876443 334444568999999988887765543 347799999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEech
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (727)
...++++...++..++..+....
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~~ 350 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVIE 350 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEec
Confidence 66677888889999988877643
No 174
>PRK07529 AMP-binding domain protein; Validated
Probab=52.78 E-value=72 Score=36.94 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=64.7
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|.+.+..+.. ..++..+|.+.+... +.......+++++|++...++-+... +..+|+++..|. ++.+..
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi-~~pi~~ 114 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGI-ANPINP 114 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCE-EEeCCC
Confidence 457777766543321 123556788876443 33444567899999999888866554 334667777773 444455
Q ss_pred CCChhhHHHHHHHhCCCEEEec
Q 004860 431 SPLERSFGKFVQDAGVTVLGTV 452 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (727)
...++.+...+++.++.++...
T Consensus 115 ~~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 115 LLEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred cCCHHHHHHHHHhcCCcEEEEe
Confidence 5567889999999999998875
No 175
>PRK13388 acyl-CoA synthetase; Provisional
Probab=52.76 E-value=92 Score=35.17 Aligned_cols=84 Identities=13% Similarity=-0.046 Sum_probs=62.3
Q ss_pred EecChHHHHHHHh---hchhcCC-CCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 375 PWTQLSSIRCTAE---GWAHIDL-KVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 375 ~~th~~l~~~~~~---~~~~~~~-~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
.+|...+...+.. .....++ .++|++...++-+...- ..+++++..|+..+.++.....+.+...+++.++.+++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v-~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEML-FWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHH-HHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 6788876554433 3345678 78999988887766543 34778899999999888776778899999999999998
Q ss_pred echHHHHHH
Q 004860 451 TVPSLVKAW 459 (727)
Q Consensus 451 ~~P~~l~~l 459 (727)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876654433
No 176
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=52.48 E-value=81 Score=36.17 Aligned_cols=96 Identities=15% Similarity=-0.038 Sum_probs=68.5
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|.+.- .-.+|.+.+...+ .......++.++|++....+-+... +..+|+++..|+..+..+.
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCC
Confidence 4567776541 1347777765443 3333456889999999887776554 3447788999999888876
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
....+.+...+++.++++++........+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 66677889999999999998877655443
No 177
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=52.01 E-value=86 Score=36.49 Aligned_cols=93 Identities=16% Similarity=-0.028 Sum_probs=65.8
Q ss_pred CCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCC
Q 004860 356 DAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSP 432 (727)
Q Consensus 356 ~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~ 432 (727)
+++|++... .+|. ...+|.+.+...+ .......++++||++..+++-+..... .+++++..|+..+......
T Consensus 99 ~~~a~~~~~--~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~-~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVD--ETHE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVV-AMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEEC--CCCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH-HHHHHHHhCeEEEecCCCC
Confidence 456655432 2232 3457887765433 334455799999999998887655433 3678899999988887777
Q ss_pred ChhhHHHHHHHhCCCEEEech
Q 004860 433 LERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 433 ~~~~l~~~i~~~~vt~l~~~P 453 (727)
..+.+...+++.++.++++..
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEcc
Confidence 778899999999999988754
No 178
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=51.63 E-value=53 Score=38.00 Aligned_cols=96 Identities=15% Similarity=0.049 Sum_probs=67.7
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++. -+..+|. .-.+|.+.+.. .+.......++.++|++..+++-+...- ..+++++..|+..+.+..
T Consensus 65 ~p~~~Al~~-~~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v-~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVT-VSSETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAV-FAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEE-EcCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHhCCEEEecCC
Confidence 456677654 3322332 24578877644 3444445679999999998887765433 347788999999888877
Q ss_pred CCChhhHHHHHHHhCCCEEEech
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (727)
......+...|+..++.++++..
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 77778899999999999888754
No 179
>PRK08315 AMP-binding domain protein; Validated
Probab=51.23 E-value=75 Score=35.97 Aligned_cols=93 Identities=14% Similarity=0.040 Sum_probs=66.2
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.++.+|.+.... +..+|++.+...+ .......++.++|++....+-+... +..+|+++..|+..+..+.
T Consensus 29 ~~~~~ai~~~~~-------~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 100 (559)
T PRK08315 29 YPDREALVYRDQ-------GLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEW-VLTQFATAKIGAILVTINP 100 (559)
T ss_pred CCCCeEEEEcCC-------CeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCeEEEecCc
Confidence 345666554322 2347888775443 3333456889999998887766543 3447789999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
......+...+++.+++.++....
T Consensus 101 ~~~~~~~~~~l~~~~~~~ii~~~~ 124 (559)
T PRK08315 101 AYRLSELEYALNQSGCKALIAADG 124 (559)
T ss_pred cCCHHHHHHHHHhcCCCEEEEecc
Confidence 777788999999999999887654
No 180
>PRK13391 acyl-CoA synthetase; Provisional
Probab=49.47 E-value=96 Score=34.64 Aligned_cols=97 Identities=16% Similarity=0.059 Sum_probs=68.2
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.++.+.+.+| -.+|...+...+ .......++.+++++..+.+-+...- ..+|+++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~-~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYL-EVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhccEEecccc
Confidence 4567776655443 237777664433 33334568899999988877665533 336788999999988877
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (727)
......+...+++.++..+.+.+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 6677889999999999999887765543
No 181
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=49.23 E-value=65 Score=36.30 Aligned_cols=87 Identities=11% Similarity=-0.020 Sum_probs=66.6
Q ss_pred eEEecChHHHHHHHhhch---hcC--CCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCC
Q 004860 373 AIPWTQLSSIRCTAEGWA---HID--LKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVT 447 (727)
Q Consensus 373 gV~~th~~l~~~~~~~~~---~~~--~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt 447 (727)
|..+|++.+...+...+. ..+ ++.+|++...+|-+..+... .+++++.|+.+.-.....+..++...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~-~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVEL-ALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHH-HHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 889999877555443333 333 78899999988877655444 568899999988887777888999999999999
Q ss_pred EEEechHHHHHHH
Q 004860 448 VLGTVPSLVKAWR 460 (727)
Q Consensus 448 ~l~~~P~~l~~l~ 460 (727)
++++....+..+.
T Consensus 122 iif~d~~~~~~i~ 134 (537)
T KOG1176|consen 122 LIFVDEDFYDKIS 134 (537)
T ss_pred EEEEcCchHHHHH
Confidence 9999777666653
No 182
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=49.06 E-value=67 Score=35.78 Aligned_cols=84 Identities=17% Similarity=0.063 Sum_probs=61.5
Q ss_pred EecChHHH---HHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+. ..+.......+++++|++...++-+.+.-. .+++++..|+..+..+.......+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~-~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFE-VYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHH-HHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 35666553 333444455789999999988877655433 37788999999988876666678888999999999988
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 77665544
No 183
>PRK13383 acyl-CoA synthetase; Provisional
Probab=48.73 E-value=65 Score=36.11 Aligned_cols=84 Identities=10% Similarity=0.002 Sum_probs=62.0
Q ss_pred EecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+... +.......++.++|++...++-+.+. +..+|+++..|+..+..+.....+.+...+++.+++.+..
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF-VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 4676665443 33333456899999998887655443 3346788999999998887777889999999999999998
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.+.....+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87766554
No 184
>TIGR02898 spore_YhcN_YlaJ sporulation lipoprotein, YhcN/YlaJ family. YhcN and YlaJ are predicted lipoproteins that have been detected as spore proteins but not vegetative proteins in Bacillus subtilis. Both appear to be expressed under control of the RNA polymerase sigma-G factor. The YlaJ-like members of this family have a low-complexity, strongly acidic 40-residue C-terminal domain that is not included in the seed alignment for this model. A portion of the low-complexity region between the lipoprotein signal sequence and the main conserved region of the protein family was also excised from the seed alignment.
Probab=47.68 E-value=81 Score=28.99 Aligned_cols=57 Identities=18% Similarity=0.189 Sum_probs=37.0
Q ss_pred HHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCC-CCChHHHHHHHHHHHHhhcCCC
Q 004860 625 VEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGF-TSQPDKLKMIFSKAIQSKLNPL 688 (727)
Q Consensus 625 ~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~-~~~~~~l~~~l~~~l~~~L~~~ 688 (727)
..|...+. +.|+|.+|.|++..+ ..+|++-. +.+. ..-.++++..+.+.+++.-|.+
T Consensus 57 ~~Ia~~v~-~v~~V~dA~vvVtg~-----~A~Vgv~~-~~~~~~~~~~~iK~~Va~~Vk~~dp~~ 114 (158)
T TIGR02898 57 DEIASEAA-KVKGVKDATVVITGN-----YAYVGVDL-TNGLEGSVTDELKEKVAETVKSTDNRI 114 (158)
T ss_pred HHHHHHHh-cCCCCceEEEEEECC-----EEEEEEEc-CCCcchhhHHHHHHHHHHHHHhhCCCc
Confidence 45677774 899999999998643 56666543 3322 2223677777777777755543
No 185
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.66 E-value=85 Score=35.64 Aligned_cols=94 Identities=15% Similarity=0.036 Sum_probs=65.8
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc---hh-cCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW---AH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~---~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~ 429 (727)
.|+.+|.+. . +..+|.+.+...+.... .. .++.++|++...++-+...- ..+|+++..|+..+..+
T Consensus 37 ~p~~~al~~--~-------~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~-~~~la~~~~Ga~~v~l~ 106 (562)
T PRK05677 37 FADKPAFSN--L-------GKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYP-VAVFGAMRAGLIVVNTN 106 (562)
T ss_pred CCCCeeEEE--C-------CceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHH-HHHHHHHHcCeEEeecC
Confidence 356666652 1 23578887755444333 22 47899999998877665433 34778899999998887
Q ss_pred CCCChhhHHHHHHHhCCCEEEechHHHH
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVPSLVK 457 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (727)
.....+.+...+++.++..++.......
T Consensus 107 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 134 (562)
T PRK05677 107 PLYTAREMEHQFNDSGAKALVCLANMAH 134 (562)
T ss_pred CCCCHHHHHHHHhccCceEEEEecchhh
Confidence 6667788999999999999887655443
No 186
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=47.12 E-value=93 Score=35.07 Aligned_cols=85 Identities=11% Similarity=0.013 Sum_probs=62.0
Q ss_pred EecChHHHHHHH---hhchhc-CCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 375 PWTQLSSIRCTA---EGWAHI-DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 375 ~~th~~l~~~~~---~~~~~~-~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
.+|.+.+...+. ...... ++.+++++...++-+.. .+..+|+++..|+..+..+.......+...+++.+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQ-FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChH-HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 478877644433 333344 89999999888776543 3344778899999999887766778899999999999998
Q ss_pred echHHHHHHH
Q 004860 451 TVPSLVKAWR 460 (727)
Q Consensus 451 ~~P~~l~~l~ 460 (727)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877655443
No 187
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=47.10 E-value=73 Score=36.00 Aligned_cols=96 Identities=18% Similarity=0.112 Sum_probs=66.2
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|.+--. + +..+|++.+...+. ......++.++|++...++-+.... ..+|+++..|+..+..+.
T Consensus 41 ~p~~~a~~~~~---~----~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~ 112 (546)
T PLN02330 41 YADKVAFVEAV---T----GKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYG-IVALGIMAAGGVFSGANP 112 (546)
T ss_pred CCCccEEEecC---C----CCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEeccCCc
Confidence 45667665322 1 24578887754433 3334568899999988877665443 346788999998887776
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (727)
......+...+++.++.++...+..+.
T Consensus 113 ~~~~~~l~~~l~~~~~~~~i~~~~~~~ 139 (546)
T PLN02330 113 TALESEIKKQAEAAGAKLIVTNDTNYG 139 (546)
T ss_pred cCCHHHHHHHHHhcCCeEEEEccchhh
Confidence 666678889999999988877665444
No 188
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=47.03 E-value=94 Score=35.01 Aligned_cols=97 Identities=16% Similarity=0.133 Sum_probs=65.4
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.+-..+ .....+|.+.+... +.......++.+++++...++-+... +..+++++..|+..+..+.
T Consensus 35 ~p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 110 (538)
T TIGR03208 35 CPDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEF-TALYLACARIGAVLNPLMP 110 (538)
T ss_pred CCCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeccCc
Confidence 45667776542211 11346788776443 33334456889999998887766543 3336788999998887766
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
....+.+...++..+++.+.+.+.
T Consensus 111 ~~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 111 IFRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 666778889999999998887553
No 189
>PLN02614 long-chain acyl-CoA synthetase
Probab=47.00 E-value=1.3e+02 Score=35.16 Aligned_cols=87 Identities=5% Similarity=-0.135 Sum_probs=64.5
Q ss_pred EEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
..+|.+.+... +.......++.++|++...++-+... +...|+++..|+..|-......++.+...++..++++++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 34677766443 33444567899999998877766442 333678899999998887777778999999999999999
Q ss_pred echHHHHHHHh
Q 004860 451 TVPSLVKAWRN 461 (727)
Q Consensus 451 ~~P~~l~~l~~ 461 (727)
+....+..+..
T Consensus 157 ~~~~~~~~~~~ 167 (666)
T PLN02614 157 VEEKKISELFK 167 (666)
T ss_pred ECHHHHHHHHH
Confidence 98776655543
No 190
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=46.87 E-value=91 Score=35.31 Aligned_cols=95 Identities=17% Similarity=0.094 Sum_probs=67.2
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhc----hhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGW----AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~----~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~ 429 (727)
.++.+|++.. | -.+|++.+...+.... ...+++++|++...++-+...- ..+|+++..|+..+..+
T Consensus 38 ~~~~~a~~~~--~-------~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~-~~~lA~~~~G~~~v~l~ 107 (560)
T PRK08751 38 FADRPAYHSF--G-------KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYP-IATFGVLRAGLTVVNVN 107 (560)
T ss_pred CCCCceEEEC--C-------ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHHhCeEEeccC
Confidence 4567776532 2 2478877655443333 2468999999988877665433 44678899999999887
Q ss_pred CCCChhhHHHHHHHhCCCEEEechHHHHH
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (727)
.......+...+.+.+++.+.........
T Consensus 108 p~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 136 (560)
T PRK08751 108 PLYTPRELKHQLIDSGASVLVVIDNFGTT 136 (560)
T ss_pred ccCCHHHHHHHHHhcCCeEEEEcchhHHH
Confidence 76677888899999999999887655443
No 191
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=46.76 E-value=87 Score=35.38 Aligned_cols=85 Identities=16% Similarity=0.180 Sum_probs=65.1
Q ss_pred EecChHHHHHHHhh---chhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+... ....++.+++++....+-+.+. +..+|+++..|+..+..+......++...+++.+++.+++
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 46777665444333 3456899999998888777665 3447789999999998887777789999999999999998
Q ss_pred chHHHHHHH
Q 004860 452 VPSLVKAWR 460 (727)
Q Consensus 452 ~P~~l~~l~ 460 (727)
.+.....+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887766554
No 192
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=46.69 E-value=97 Score=35.09 Aligned_cols=95 Identities=11% Similarity=-0.028 Sum_probs=67.0
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.. +..+|+..+...+. ......++.++|++....+-+...- ..+|+++..|+..+..+.
T Consensus 36 ~p~~~a~~~~---------~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~-~~~la~~~~G~~~v~v~~ 105 (557)
T PRK07059 36 YADRPAFICM---------GKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYP-VAIAAVLRAGYVVVNVNP 105 (557)
T ss_pred cCCCceEEEc---------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCeEEeccCc
Confidence 3566666542 24678887754433 3334568999999988776665433 336788999999998876
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKA 458 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (727)
......+...+++.+++.++........
T Consensus 106 ~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 133 (557)
T PRK07059 106 LYTPRELEHQLKDSGAEAIVVLENFATT 133 (557)
T ss_pred ccCHHHHHHHHHccCceEEEEchhhHHH
Confidence 6677889999999999998887665443
No 193
>PRK12583 acyl-CoA synthetase; Provisional
Probab=46.14 E-value=1e+02 Score=34.78 Aligned_cols=93 Identities=13% Similarity=0.005 Sum_probs=66.1
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++..- ++..+|.+.+...+. ......++.+++++....+-+.. .+..+|+++..|+..+..+.
T Consensus 31 ~p~~~a~~~~~-------~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~-~~~~~~a~~~~G~~~v~l~~ 102 (558)
T PRK12583 31 FPDREALVVRH-------QALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAE-WLLTQFATARIGAILVNINP 102 (558)
T ss_pred CCCCeEEEecC-------CCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChH-HHHHHHHHHhhCCEEEecCC
Confidence 45666665421 123578877754433 33345688999999887766654 23447789999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
......+...+++.+++.+++.+.
T Consensus 103 ~~~~~~~~~~l~~~~~~~ii~~~~ 126 (558)
T PRK12583 103 AYRASELEYALGQSGVRWVICADA 126 (558)
T ss_pred CCCHHHHHHHHHhcCCcEEEEecc
Confidence 777888999999999999888764
No 194
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=46.13 E-value=64 Score=34.59 Aligned_cols=67 Identities=16% Similarity=0.086 Sum_probs=53.7
Q ss_pred cCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 392 IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 392 ~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
.++.++|++....+-+.. .+..+++++..|+.++..+.......+...+++.+++.+...+.....+
T Consensus 20 ~g~~~gd~v~l~~~n~~~-~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~ 86 (408)
T TIGR01733 20 GGVGPGDRVAVLLERSAE-LVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDSALASRL 86 (408)
T ss_pred hCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcCchhhhc
Confidence 678999999888776644 3344778899999999888767778899999999999999988766544
No 195
>PRK09088 acyl-CoA synthetase; Validated
Probab=45.62 E-value=1.2e+02 Score=33.65 Aligned_cols=92 Identities=13% Similarity=0.025 Sum_probs=64.8
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.++++-...| ..+|...+...+ .......++.++|++...++-+... +..+|+++..|+..+..+.
T Consensus 8 ~p~~~a~~~~~~~-------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~ 79 (488)
T PRK09088 8 QPQRLAAVDLALG-------RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNW 79 (488)
T ss_pred CCCceEEEecCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCc
Confidence 4566666543333 357887764443 3333456889999998887766553 3346788999999988876
Q ss_pred CCChhhHHHHHHHhCCCEEEech
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P 453 (727)
......+...+++.+++.+....
T Consensus 80 ~~~~~~~~~~~~~~~~~~ii~~~ 102 (488)
T PRK09088 80 RLSASELDALLQDAEPRLLLGDD 102 (488)
T ss_pred cCCHHHHHHHHHhCCCCEEEEcc
Confidence 66778899999999999987754
No 196
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=45.31 E-value=83 Score=35.51 Aligned_cols=90 Identities=12% Similarity=0.001 Sum_probs=62.6
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.++++ +.. | ..+|.+.+...+ .......++.++|++...++-+.. .+..+++++..|+..+..+.
T Consensus 36 ~pd~~a~~-~~~---~----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~ 106 (547)
T PRK06087 36 MPDKIAVV-DNH---G----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCE-FTIIYLACLKVGAVSVPLLP 106 (547)
T ss_pred CCCceEEE-cCC---C----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeccch
Confidence 45667755 322 2 346877764433 333345789999999887765543 23447789999999888876
Q ss_pred CCChhhHHHHHHHhCCCEEEec
Q 004860 431 SPLERSFGKFVQDAGVTVLGTV 452 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~ 452 (727)
......+...++..++.++++.
T Consensus 107 ~~~~~~l~~~l~~~~~~~l~~~ 128 (547)
T PRK06087 107 SWREAELVWVLNKCQAKMFFAP 128 (547)
T ss_pred hcCHHHHHHHHHhcCCeEEEEe
Confidence 6667788899999999888764
No 197
>PRK06164 acyl-CoA synthetase; Validated
Probab=44.43 E-value=84 Score=35.40 Aligned_cols=91 Identities=16% Similarity=0.038 Sum_probs=64.7
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|++.|++ . +.-.+|.+.+... +.......++.++|++....+-+...- ..+|+++..|+..+..+.
T Consensus 23 ~p~~~a~~--~-------~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 92 (540)
T PRK06164 23 RPDAVALI--D-------EDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWV-VLFLACARLGATVIAVNT 92 (540)
T ss_pred CCCCeEEe--c-------CCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHH-HHHHHHHHhCcEEEecCC
Confidence 45667765 1 1234777776443 333334578899999988877665433 336788999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
......+...+++.++++++..+.
T Consensus 93 ~~~~~~l~~~i~~~~~~~ii~~~~ 116 (540)
T PRK06164 93 RYRSHEVAHILGRGRARWLVVWPG 116 (540)
T ss_pred CCCcHHHHHHHHhcCccEEEEccc
Confidence 667788999999999999987654
No 198
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.34 E-value=1.6e+02 Score=33.22 Aligned_cols=93 Identities=18% Similarity=0.121 Sum_probs=65.5
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhh---chhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.++.++.+...-+. .+|++.+...+... ....++.++|++...++-+..+ +..+|+++..|+..+....
T Consensus 24 ~~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~ 95 (534)
T COG0318 24 NPDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNP 95 (534)
T ss_pred CCCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCc
Confidence 45666666553332 78888775544333 3344588999988777655433 2347788999999999887
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
...+..+...++..++..++....
T Consensus 96 ~~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 96 RLTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred ccCHHHHHHHHHhcCCeEEEEccc
Confidence 667788888888888888888765
No 199
>PRK13390 acyl-CoA synthetase; Provisional
Probab=43.95 E-value=1.4e+02 Score=33.15 Aligned_cols=93 Identities=18% Similarity=0.118 Sum_probs=65.2
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.++++... +| -.+|.+.+...+ .......++.++|++....+-+.+.- ..+|+++..|+..+..+.
T Consensus 10 ~p~~~a~~~~~---~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~-~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAE---TG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEAL-VVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecC---CC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHH-HHHHHHHHhCCEEecccc
Confidence 45677765422 22 357888764433 33344568999999988877766533 347788999999888877
Q ss_pred CCChhhHHHHHHHhCCCEEEechH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
...+..+...++..++..+.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 667788888899888888876543
No 200
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=43.64 E-value=1.3e+02 Score=35.03 Aligned_cols=104 Identities=9% Similarity=-0.139 Sum_probs=69.5
Q ss_pred CCCCeEEEEe--CCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEe
Q 004860 354 PVDAVVNILF--SSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (727)
Q Consensus 354 ~~~~~a~ii~--TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~ 428 (727)
.|+.+|+... ..|..|.- ..+|.+.+...+ .......++.++|++..+++-+... +...|+++..|+..+-.
T Consensus 55 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew-~~~~lA~~~~G~v~vpl 131 (660)
T PLN02430 55 YPDNKMLGWRRIVDGKVGPY--MWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQW-IVAMEACAAHSLICVPL 131 (660)
T ss_pred CCCCceEEEEecCCCCCCCc--EEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEe
Confidence 3455665432 23333321 335777665443 3334456899999998877665442 23367889999998888
Q ss_pred cCCCChhhHHHHHHHhCCCEEEechHHHHHHH
Q 004860 429 QGSPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (727)
Q Consensus 429 ~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (727)
.....++.+...++..+++++++....+..++
T Consensus 132 ~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 132 YDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred ccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 77777889999999999999998776554444
No 201
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=43.58 E-value=76 Score=35.37 Aligned_cols=84 Identities=14% Similarity=0.101 Sum_probs=61.9
Q ss_pred EecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+... +.......++.+++++...++-+...... +|+++..|+..+..+.......+...+++.+++.++.
T Consensus 25 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~ 103 (515)
T TIGR03098 25 TLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTA-MFGAALAGGVFVPINPLLKAEQVAHILADCNVRLLVT 103 (515)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH-HHHHHhcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEE
Confidence 5788776443 33333456789999998887776654433 6788899999888877777788999999999999988
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.+..+..+
T Consensus 104 ~~~~~~~~ 111 (515)
T TIGR03098 104 SSERLDLL 111 (515)
T ss_pred ccchhhhh
Confidence 77655443
No 202
>PRK05934 type III secretion system protein; Validated
Probab=41.65 E-value=1.2e+02 Score=30.90 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=49.2
Q ss_pred HHHHHHHhhcCCCceeeEE-EeecCCCCCceEEEEEEEe--cCCCCCChHHHHHHHHHHHHhhcCCCcccceEEEcCC
Q 004860 625 VEIERVCDQADESILETAA-ISVSPAGGGPEVLVIFVVL--KKGFTSQPDKLKMIFSKAIQSKLNPLFKVSLVKVVPE 699 (727)
Q Consensus 625 ~eIE~~l~~~~p~V~~a~v-v~~~~~~~~~~~l~a~vv~--~~~~~~~~~~l~~~l~~~l~~~L~~~~~P~~i~~v~~ 699 (727)
+|+++.|. +.++|.+|-| ++.+.+...++...|-|++ ++|...+.+.+ +.|.+.+....|. +-|..+.++|+
T Consensus 74 GELaRTIe-sld~VesARVHLAlPe~s~~~~~pTASVvLtL~~G~tLs~~QV-~gIvnLVAsSVpG-LtpEnVTVVDq 148 (341)
T PRK05934 74 EQLEKDLT-MFHPVAQATVALSLETEDDPMSPAEISVILSLPKAETLSPSLL-HSITDYLTSSVPG-LTKEHITLSDN 148 (341)
T ss_pred HHHHHHHH-cccCcceeEEEEeCCCCCccCCCCceEEEEecCCCCcCCHHHH-HHHHHHHHhcCCC-CCccCeEEECC
Confidence 57888885 8999999987 4555543332334444444 56667775544 4577778777764 88999999985
No 203
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=41.33 E-value=1e+02 Score=35.91 Aligned_cols=86 Identities=9% Similarity=-0.082 Sum_probs=63.8
Q ss_pred EEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
..+|.+.+...+ .......++.++|++...++-+.... ...++++..|+..+-+......+++...+++.++++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWI-IAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 457887765443 33344578999999988877665433 33678899999998887777778899999999999999
Q ss_pred echHHHHHHH
Q 004860 451 TVPSLVKAWR 460 (727)
Q Consensus 451 ~~P~~l~~l~ 460 (727)
+....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8766655443
No 204
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=41.32 E-value=1e+02 Score=35.05 Aligned_cols=84 Identities=12% Similarity=-0.008 Sum_probs=63.1
Q ss_pred EecChHHHHHHHh---hchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+.. .....++.++|++....+-+... +..+|+++..|+..+..+.....+.+...+.+.++.++++
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 3687776544333 33456899999998887766553 3447788999999988877777889999999999999998
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
....+..+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 205
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=41.15 E-value=1.8e+02 Score=32.00 Aligned_cols=94 Identities=17% Similarity=0.048 Sum_probs=67.0
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.. .-.+|+..+...+. ......++.++|++....+-+.+. +..+++++..|+..+..+.
T Consensus 15 ~p~~~a~~~~---------~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~i~~ 84 (483)
T PRK03640 15 TPDRTAIEFE---------EKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEM-ILVIHALQQLGAVAVLLNT 84 (483)
T ss_pred CCCceEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhCCcEEEecCc
Confidence 4577776532 13577777654433 333456789999998888777663 4557789999999999887
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (727)
......+...+++.++..+........
T Consensus 85 ~~~~~~~~~~~~~~~~~~vi~~~~~~~ 111 (483)
T PRK03640 85 RLSREELLWQLDDAEVKCLITDDDFEA 111 (483)
T ss_pred CCCHHHHHHHHHhCCCCEEEEcchhhH
Confidence 777788889999999988877655443
No 206
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=40.58 E-value=1.4e+02 Score=33.55 Aligned_cols=84 Identities=13% Similarity=0.024 Sum_probs=61.4
Q ss_pred EEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
..+|.+.+...+ .......++.++|++..+++-+..... .+++.+..|+..+..+.....+.+...++..++..+.
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~-~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLE-AWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHH-HHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 457887764433 333445789999999888777665443 3668888999988887666778899999999999988
Q ss_pred echHHHHH
Q 004860 451 TVPSLVKA 458 (727)
Q Consensus 451 ~~P~~l~~ 458 (727)
+.......
T Consensus 117 ~~~~~~~~ 124 (542)
T PRK06018 117 TDLTFVPI 124 (542)
T ss_pred EccccHHH
Confidence 76654433
No 207
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.14 E-value=1.6e+02 Score=33.43 Aligned_cols=99 Identities=12% Similarity=-0.026 Sum_probs=68.6
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhch-hcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEec
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWA-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQ 429 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~ 429 (727)
.|+..+++.. + . ..-.+|.+.+...+. .... ..++.++|++...++-+.... ..+++++..|+..+..+
T Consensus 23 ~~~~~a~~~~-~----~-~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~-~~~lA~~~~G~~~v~l~ 95 (576)
T PRK05620 23 HGDTTVTTWG-G----A-EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHL-EVLFAVACMGAVFNPLN 95 (576)
T ss_pred CCCceEEEEc-C----C-ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHH-HHHHHHHhcCCEEeecc
Confidence 4566665542 1 1 234567776644333 2222 368899999988877665443 33678899999988887
Q ss_pred CCCChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 430 GSPLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 430 ~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
.......+...++..+++.+++.+.....+
T Consensus 96 ~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 125 (576)
T PRK05620 96 KQLMNDQIVHIINHAEDEVIVADPRLAEQL 125 (576)
T ss_pred cccCHHHHHHHHhccCCcEEEEChhhHHHH
Confidence 766778899999999999999887665544
No 208
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=39.86 E-value=95 Score=35.26 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=57.8
Q ss_pred EEecChHHHHHHHhhch---h-cCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEE
Q 004860 374 IPWTQLSSIRCTAEGWA---H-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVL 449 (727)
Q Consensus 374 V~~th~~l~~~~~~~~~---~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l 449 (727)
..+|...+...+..... . .++.++|++..+++-+... +..+|+++..|+..+..+.......+...+++.++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 35787776544433332 2 4889999998877666543 34467888999888877766667889999999999988
Q ss_pred EechHH
Q 004860 450 GTVPSL 455 (727)
Q Consensus 450 ~~~P~~ 455 (727)
...+..
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 209
>PLN02479 acetate-CoA ligase
Probab=39.27 E-value=1.2e+02 Score=34.57 Aligned_cols=93 Identities=11% Similarity=0.008 Sum_probs=66.7
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++. +. ..+|.+.+...+ .......++.++|++...++-+.+.. ..+++++..|+..+..+.
T Consensus 33 ~p~~~a~~~---~~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~ 102 (567)
T PLN02479 33 HPTRKSVVH---GS------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMY-EAHFGVPMAGAVVNCVNI 102 (567)
T ss_pred CCCceEEEE---CC------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHH-HHHHHHHhCCcEEEEecc
Confidence 456676653 21 246777654433 33344568999999988887665433 336788999999988887
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l 456 (727)
....+.+...+++.++..++..+..+
T Consensus 103 ~~~~~~l~~~l~~~~~~~ii~~~~~~ 128 (567)
T PLN02479 103 RLNAPTIAFLLEHSKSEVVMVDQEFF 128 (567)
T ss_pred ccCHHHHHHHHhhcCceEEEEchhhh
Confidence 77778899999999999999876654
No 210
>PRK05850 acyl-CoA synthetase; Validated
Probab=38.91 E-value=2.6e+02 Score=31.80 Aligned_cols=102 Identities=16% Similarity=0.108 Sum_probs=66.0
Q ss_pred CCCCeEEEEeCCCCCCCCC--eEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEe
Q 004860 354 PVDAVVNILFSSGTTGEPK--AIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PK--gV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~ 428 (727)
.|+.+|++.... .+.++ ...+|++.+...+. ......+ .++|++...++-+...- ..+++++..|+..+..
T Consensus 14 ~p~~~a~~~~~~--~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~-~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDY--EQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYI-VAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEcc--CCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHH-HHHHHHHHcCceEEec
Confidence 456676653211 11222 24678877644333 2333445 57899988887665433 3367889999998888
Q ss_pred cCC---CChhhHHHHHHHhCCCEEEechHHHHHH
Q 004860 429 QGS---PLERSFGKFVQDAGVTVLGTVPSLVKAW 459 (727)
Q Consensus 429 ~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l 459 (727)
+.. .....+...|++.++.+++..+.....+
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 642 2456788999999999999988766554
No 211
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=38.65 E-value=1.2e+02 Score=31.25 Aligned_cols=58 Identities=19% Similarity=0.216 Sum_probs=40.8
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 230 v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
++||+.|.=-..-+--.-.+++|.++ |.-.+.+-|..-..+-..+|+..++.+++++.
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~~-Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAAK-GYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHHc-CCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 88899555444444445555555554 87777776755555667899999999999987
No 212
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=37.98 E-value=84 Score=35.73 Aligned_cols=79 Identities=15% Similarity=-0.025 Sum_probs=58.9
Q ss_pred EecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+ .......++.++|++...++-+...- ..+++++..|+..+..+.....+.+...+++.+++++..
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~-~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYL-EWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 46777665433 33344578999999998877665433 336788999999998877777788999999999998887
Q ss_pred chH
Q 004860 452 VPS 454 (727)
Q Consensus 452 ~P~ 454 (727)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 213
>PRK08162 acyl-CoA synthetase; Validated
Probab=37.74 E-value=1e+02 Score=34.76 Aligned_cols=84 Identities=14% Similarity=-0.032 Sum_probs=62.7
Q ss_pred EecChHHHHHHHhh---chhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+... ....++.++|++...++-+.... ..+++.+..|+..+..+.......+...+++.+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~-~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMV-EAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHH-HHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 47887775544333 33468999999988887766543 336788999998888877677788999999999999998
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87665543
No 214
>PRK13382 acyl-CoA synthetase; Provisional
Probab=37.45 E-value=1.4e+02 Score=33.59 Aligned_cols=94 Identities=14% Similarity=-0.096 Sum_probs=65.6
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++- .+ -.+|...+...+ .......++.+++++...++-+.. .+..+|+.+..|+..+..+.
T Consensus 56 ~p~~~a~~~--~~-------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~ 125 (537)
T PRK13382 56 CPDRPGLID--EL-------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNT 125 (537)
T ss_pred CCCCeEEEe--CC-------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCc
Confidence 456677662 11 147776664433 333345688999999888876655 34457788999999998876
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVK 457 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~ 457 (727)
......+...+++.++++++.......
T Consensus 126 ~~~~~~l~~~l~~~~~~~vi~~~~~~~ 152 (537)
T PRK13382 126 SFAGPALAEVVTREGVDTVIYDEEFSA 152 (537)
T ss_pred ccCHHHHHHHHHhcCCCEEEEchhhHH
Confidence 666678999999999999887655443
No 215
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=37.29 E-value=2.8e+02 Score=31.91 Aligned_cols=101 Identities=16% Similarity=0.045 Sum_probs=64.6
Q ss_pred CCCCeEEEEeC--CCCCCCCCeEEecChHHHHHHHhhc---hhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEe
Q 004860 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEGW---AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (727)
Q Consensus 354 ~~~~~a~ii~T--SGSTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~ 428 (727)
.++.++++.-. .+++|. ...+|.+.+...+.... ... +.++|++...++-+... +..+|+++..|+..+.+
T Consensus 47 ~~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl 122 (612)
T PRK12476 47 VGDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPL 122 (612)
T ss_pred CCCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhH-HHHHHHHHHcCceeEec
Confidence 35677765421 112332 34578877644333222 223 78999998888776543 33467889999988766
Q ss_pred -cCCCC--hhhHHHHHHHhCCCEEEechHHHHH
Q 004860 429 -QGSPL--ERSFGKFVQDAGVTVLGTVPSLVKA 458 (727)
Q Consensus 429 -~~~~~--~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (727)
+.... .+.+...|+..++.++++.+.....
T Consensus 123 ~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 123 FAPELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 33222 5678899999999999988765543
No 216
>PRK07470 acyl-CoA synthetase; Validated
Probab=36.87 E-value=1.2e+02 Score=33.88 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=59.8
Q ss_pred EecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+... +.......++.++|++...++-+..... .+++++..|+..+..+.......+...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 110 (528)
T PRK07470 32 SWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFE-SMFAAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMIC 110 (528)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHH-HHHHHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEE
Confidence 5677776443 3334445789999999888776654333 36788999998888877667788999999999999988
Q ss_pred chHHH
Q 004860 452 VPSLV 456 (727)
Q Consensus 452 ~P~~l 456 (727)
.+...
T Consensus 111 ~~~~~ 115 (528)
T PRK07470 111 HADFP 115 (528)
T ss_pred cchhH
Confidence 76543
No 217
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=35.82 E-value=1.1e+02 Score=34.12 Aligned_cols=84 Identities=14% Similarity=0.105 Sum_probs=61.8
Q ss_pred EecChHHH---HHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSI---RCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~---~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+. +.+.......++.+++++..+.+-+... +..+++.+..|+..+..+.......+...+++.+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAF-FEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 35655553 3344444557899999998887776553 3446788889999988877667788999999999999998
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.......+
T Consensus 90 ~~~~~~~~ 97 (509)
T PRK12406 90 HADLLHGL 97 (509)
T ss_pred ccchhhhh
Confidence 77666554
No 218
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=35.77 E-value=1.1e+02 Score=33.24 Aligned_cols=68 Identities=18% Similarity=0.140 Sum_probs=52.9
Q ss_pred HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEechH
Q 004860 386 AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGTVPS 454 (727)
Q Consensus 386 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~ 454 (727)
.......++.++|++...++-+.+ .+..+++.+..|+..+..+.......+...+++.++..+...+.
T Consensus 13 a~~l~~~g~~~gd~v~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 13 AKALKAQGIRSGSRVALVGQNSIE-MVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred HHHHHHhCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 333445689999999988877754 33447789999999998887777788889999999998877654
No 219
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=34.90 E-value=1.8e+02 Score=33.44 Aligned_cols=95 Identities=8% Similarity=-0.039 Sum_probs=63.4
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.++++.. +..| ....+|.+.+...+. ......++.++|++...++-+.... ..+|+++..|+..+.++.
T Consensus 52 ~p~~~a~~~~--~~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~Gav~vpl~~ 126 (614)
T PRK08180 52 APDRVFLAER--GADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHA-LLALAAMYAGVPYAPVSP 126 (614)
T ss_pred CCCCceeeec--cCCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHH-HHHHHHHHcCCeEeeecc
Confidence 4566766543 1122 134678887655443 3334568999999988877665433 346788999999988865
Q ss_pred CCC-----hhhHHHHHHHhCCCEEEech
Q 004860 431 SPL-----ERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 431 ~~~-----~~~l~~~i~~~~vt~l~~~P 453 (727)
... ...+...+++.++.++++..
T Consensus 127 ~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 127 AYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 433 56788888888888887753
No 220
>PRK06178 acyl-CoA synthetase; Validated
Probab=33.50 E-value=1.6e+02 Score=33.33 Aligned_cols=85 Identities=15% Similarity=0.008 Sum_probs=63.0
Q ss_pred EecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+...+. ......++++++++...++-+.... ..+++++..|+..+..+.......+...+++.++.++++
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH-IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH-HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 477777654433 3333568899999988877766533 446788889998887776666778999999999999999
Q ss_pred chHHHHHHH
Q 004860 452 VPSLVKAWR 460 (727)
Q Consensus 452 ~P~~l~~l~ 460 (727)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 888766554
No 221
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=31.30 E-value=1.8e+02 Score=32.32 Aligned_cols=84 Identities=8% Similarity=0.007 Sum_probs=59.9
Q ss_pred EecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+...+ .......++.+++++....+-+.. .+..+++++..|+..+..+.......+...+++.+++.++.
T Consensus 30 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~ 108 (508)
T TIGR02262 30 SLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVD-FPIAFLGAIRAGIVPVALNTLLTADDYAYMLEDSRARVVFV 108 (508)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEE
Confidence 46766664433 333345688999998877655533 22446788999999888877777789999999999999988
Q ss_pred chHHHHHH
Q 004860 452 VPSLVKAW 459 (727)
Q Consensus 452 ~P~~l~~l 459 (727)
.......+
T Consensus 109 ~~~~~~~~ 116 (508)
T TIGR02262 109 SGELLPVI 116 (508)
T ss_pred chhhHHHH
Confidence 77655443
No 222
>PLN03051 acyl-activating enzyme; Provisional
Probab=30.59 E-value=3.3e+02 Score=30.29 Aligned_cols=97 Identities=8% Similarity=-0.042 Sum_probs=63.5
Q ss_pred CCCceEEEEecCCCCCCcc--ceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEeecC
Q 004860 189 EDNTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIA 264 (727)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~-~vva~lA~~kaGa~~vpl~ 264 (727)
.|+.+|++....+ .+|.. ..+|++.+...+.. ..... +.++|++...+|-+-. .+..+++++..|+..+...
T Consensus 117 ~~~d~a~i~yTSG-TTG~PKgV~~sh~~~~~~~~~---~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 117 PVESVTNILFSSG-TTGEPKAIPWTHLSPLRCASD---GWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred CccceEEEEeCCC-CCCCCceEEEccchHHHHHHH---HHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 3577777765432 23332 35677766543322 22334 7889988776664321 1245778889999988776
Q ss_pred CCCCHHHHHHHHHhcCeEEEEeecc
Q 004860 265 DSFAAREIATRLRVSKAKGIFTQDF 289 (727)
Q Consensus 265 p~~~~~~l~~~l~~~~~~~il~~~~ 289 (727)
..+..+++...+++.++.++.....
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~ 217 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPS 217 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHH
Confidence 5566788999999999999987664
No 223
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=30.11 E-value=1.8e+02 Score=32.98 Aligned_cols=80 Identities=16% Similarity=0.106 Sum_probs=57.2
Q ss_pred EecChHHHHHHH---hhch-hcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 375 PWTQLSSIRCTA---EGWA-HIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 375 ~~th~~l~~~~~---~~~~-~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
.+|...+..... .... ..++.+++++....+-+... +..+++++..|+..+.++.......+...+++.+++.+.
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 467776644333 2222 36889999998877655432 234678899999999887766778899999999999988
Q ss_pred echHH
Q 004860 451 TVPSL 455 (727)
Q Consensus 451 ~~P~~ 455 (727)
+.+..
T Consensus 127 ~~~~~ 131 (560)
T PRK08974 127 IVSNF 131 (560)
T ss_pred Eeccc
Confidence 76543
No 224
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=29.83 E-value=4.3e+02 Score=26.45 Aligned_cols=77 Identities=12% Similarity=0.191 Sum_probs=49.8
Q ss_pred cHHHHHH-HHHHHHHHHHhh--cCCCCEEEEEcCCCHHHHHHHHHHHHh------C--CEEeecCCC---CCHHHHHHHH
Q 004860 211 TYKELRE-QVMLVANALDTM--FSKGDAIAIDMPMTVRAVIIYLAIILA------G--YVVVSIADS---FAAREIATRL 276 (727)
Q Consensus 211 TY~eL~~-~a~~lA~~L~~~--v~~gd~Vai~~~~s~~~vva~lA~~ka------G--a~~vpl~p~---~~~~~l~~~l 276 (727)
++..+.+ ..+++.+.+.+. +.+|++|+|.+.-+.|.++.+..+... | ...+-+|.. +..+.+..+.
T Consensus 4 ~~~~~~~~~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~ 83 (258)
T PRK10696 4 EFNKLQKRLRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYL 83 (258)
T ss_pred chhHHHHHHHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHH
Confidence 3344444 345566667776 899999999999999998776555432 1 344455553 3445556667
Q ss_pred HhcCeEEEEee
Q 004860 277 RVSKAKGIFTQ 287 (727)
Q Consensus 277 ~~~~~~~il~~ 287 (727)
+..+..+.+.+
T Consensus 84 ~~lgI~~~v~~ 94 (258)
T PRK10696 84 ESLGVPYHIEE 94 (258)
T ss_pred HHhCCCEEEEE
Confidence 77777766654
No 225
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=29.18 E-value=1.9e+02 Score=34.00 Aligned_cols=88 Identities=10% Similarity=0.035 Sum_probs=63.2
Q ss_pred CeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCE
Q 004860 372 KAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTV 448 (727)
Q Consensus 372 KgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~ 448 (727)
....+|.+.+...+ .......++.++|++..+++-+... +...++++..|+..+-......++++...++..++.+
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 35677887765443 3334557899999998877665432 2336788899998887766666788888999999999
Q ss_pred EEechHHHHHHH
Q 004860 449 LGTVPSLVKAWR 460 (727)
Q Consensus 449 l~~~P~~l~~l~ 460 (727)
+++....+..+.
T Consensus 197 lv~~~~~~~~l~ 208 (700)
T PTZ00216 197 IVCNGKNVPNLL 208 (700)
T ss_pred EEECHHHHHHHH
Confidence 988776655543
No 226
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=28.64 E-value=1.4e+02 Score=28.13 Aligned_cols=45 Identities=9% Similarity=0.040 Sum_probs=34.7
Q ss_pred eecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHHHHHH
Q 004860 209 LMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVIIYLAI 253 (727)
Q Consensus 209 ~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva~lA~ 253 (727)
-+||.|+.+.+.++|..+.+..+....+.|...++-..++..||-
T Consensus 16 ~~s~~~i~~~i~~la~~i~~~~~~~~~viV~i~~gg~~~A~~La~ 60 (181)
T PRK09162 16 LVSAAEVEAAIDRMADEITADLADENPLVLCVMGGGLVFTGQLLP 60 (181)
T ss_pred eecHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHH
Confidence 799999999999999999987322234667777777777777764
No 227
>PRK05852 acyl-CoA synthetase; Validated
Probab=28.42 E-value=1.8e+02 Score=32.71 Aligned_cols=90 Identities=14% Similarity=-0.015 Sum_probs=62.4
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++.. .+ ...+|.+.+.. .+.......++.++|++...++-+... +..+|+++..|+..+..+.
T Consensus 29 ~p~~~ai~~~-~~------~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~ 100 (534)
T PRK05852 29 LPEAPALVVT-AD------RIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEF-VVALLAASRADLVVVPLDP 100 (534)
T ss_pred CCCCcEEEec-CC------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHH-HHHHHHHHHcCcEEeecCC
Confidence 4566665542 11 12467766644 333344557899999998887665433 3346788999999998887
Q ss_pred CCChhhHHHHHHHhCCCEEEe
Q 004860 431 SPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~ 451 (727)
......+...|+..+++.++.
T Consensus 101 ~~~~~~l~~~l~~~~~~~ii~ 121 (534)
T PRK05852 101 ALPIAEQRVRSQAAGARVVLI 121 (534)
T ss_pred CCCcHHHHHHHHhCCCCEEEE
Confidence 777788999999999998874
No 228
>PRK07867 acyl-CoA synthetase; Validated
Probab=28.41 E-value=2.2e+02 Score=32.08 Aligned_cols=83 Identities=11% Similarity=-0.036 Sum_probs=59.1
Q ss_pred EecChHHHHHHHhh---chh-cCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 375 PWTQLSSIRCTAEG---WAH-IDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 375 ~~th~~l~~~~~~~---~~~-~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
.+|...+...+... ... .+..+++++...++-+.... ..+++++..|+.++.++....++.+...+++.++.+++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFS-LLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHH-HHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 47777664433322 223 36778888877776554433 34678999999999888777778899999999999999
Q ss_pred echHHHHH
Q 004860 451 TVPSLVKA 458 (727)
Q Consensus 451 ~~P~~l~~ 458 (727)
+.......
T Consensus 107 ~~~~~~~~ 114 (529)
T PRK07867 107 TESAHAEL 114 (529)
T ss_pred ECHhHHHH
Confidence 88766543
No 229
>PRK06060 acyl-CoA synthetase; Validated
Probab=28.40 E-value=1.8e+02 Score=34.27 Aligned_cols=92 Identities=12% Similarity=-0.057 Sum_probs=64.3
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.+|++. + . .+|.+.+.. .+.......++.+++++...++-+..... .+++++..|+..+..+.
T Consensus 19 ~pd~~a~~~---~-----~--~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~-~~la~~~aG~~~vpi~p 87 (705)
T PRK06060 19 WYDRPAFYA---A-----D--VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQ-LLLACLARGVMAFLANP 87 (705)
T ss_pred CCCceEEEe---c-----C--ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHH-HHHHHHHhCcEEEecCC
Confidence 457777652 2 1 378777644 33344455789999999888877655433 36788999998888776
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLV 456 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l 456 (727)
......+...+++.++.+++......
T Consensus 88 ~~~~~~l~~~l~~~~~~~vi~~~~~~ 113 (705)
T PRK06060 88 ELHRDDHALAARNTEPALVVTSDALR 113 (705)
T ss_pred CCCHHHHHHHHhcCCCcEEEEchHHh
Confidence 66667788888888988887765443
No 230
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=27.64 E-value=1.6e+02 Score=23.23 Aligned_cols=65 Identities=25% Similarity=0.261 Sum_probs=50.2
Q ss_pred eecHHHHHHHHHHHHH---HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEE
Q 004860 209 LMTYKELREQVMLVAN---ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGI 284 (727)
Q Consensus 209 ~lTY~eL~~~a~~lA~---~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~i 284 (727)
..||.||++.-..+++ .|.+. +...|-|+|+-=++-.. .-.+-|+-.-+.++++.-+++.++++=
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~S-----------y~V~Fl~~~~s~eev~~ele~mga~in 77 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSS-----------YYVVFLEEVESEEEVERELEDMGAEIN 77 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCcee-----------EEEEEEeccCCHHHHHHHHHHhCchhc
Confidence 7899999999877665 46666 88999999987665321 234567788899999999999998764
No 231
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.62 E-value=1.8e+02 Score=32.70 Aligned_cols=82 Identities=13% Similarity=0.017 Sum_probs=59.0
Q ss_pred EecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+.. .+.......++.++|++...++-+.... ..+++++..|+..+..+....+..+...+++.++..+..
T Consensus 39 ~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~ 117 (539)
T PRK07008 39 RYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHL-EAYYGVSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLF 117 (539)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHH-HHHHHHHhcCcEEeecccccCHHHHHHHHhccCCcEEEE
Confidence 467776643 3444445578999999988877665333 335788889998888876666778888899999998887
Q ss_pred chHHHH
Q 004860 452 VPSLVK 457 (727)
Q Consensus 452 ~P~~l~ 457 (727)
.+....
T Consensus 118 ~~~~~~ 123 (539)
T PRK07008 118 DLTFLP 123 (539)
T ss_pred cchhHH
Confidence 765544
No 232
>PRK06188 acyl-CoA synthetase; Validated
Probab=27.57 E-value=1.7e+02 Score=32.63 Aligned_cols=80 Identities=14% Similarity=0.052 Sum_probs=58.9
Q ss_pred EEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEE
Q 004860 374 IPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLG 450 (727)
Q Consensus 374 V~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~ 450 (727)
..+|.+.+...+ .......++.+++++...++-+.... ..+++++..|+..+..+.......+...+...+++.+.
T Consensus 36 ~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~ 114 (524)
T PRK06188 36 TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVL-MAIGAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLI 114 (524)
T ss_pred CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHH-HHHHHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEE
Confidence 356777765433 33334568899999988776665433 33678899999999887666777888999999999998
Q ss_pred echH
Q 004860 451 TVPS 454 (727)
Q Consensus 451 ~~P~ 454 (727)
..+.
T Consensus 115 ~~~~ 118 (524)
T PRK06188 115 VDPA 118 (524)
T ss_pred Eecc
Confidence 8776
No 233
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=26.66 E-value=5.9e+02 Score=29.28 Aligned_cols=101 Identities=11% Similarity=0.031 Sum_probs=62.0
Q ss_pred CCCCeEEEEeC--CCCCCCCCeEEecChHHHHHHHhh---chhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEe
Q 004860 354 PVDAVVNILFS--SGTTGEPKAIPWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALY 428 (727)
Q Consensus 354 ~~~~~a~ii~T--SGSTG~PKgV~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~ 428 (727)
.++.+|++... ++.+|. ...+|.+.+...+... .... +.++|++...++-+.... ..+|+++..|+..+.+
T Consensus 34 ~~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~-~~~lA~~~~G~v~vpl 109 (631)
T PRK07769 34 RGDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYL-IAFFGALYAGRIAVPL 109 (631)
T ss_pred CCCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHH-HHHHHHHHcCCEEEee
Confidence 35666665432 222232 3457877765433322 2233 689999988877665433 3367888899887755
Q ss_pred -cCCC--ChhhHHHHHHHhCCCEEEechHHHHH
Q 004860 429 -QGSP--LERSFGKFVQDAGVTVLGTVPSLVKA 458 (727)
Q Consensus 429 -~~~~--~~~~l~~~i~~~~vt~l~~~P~~l~~ 458 (727)
+... ....+...+++.++..+.+.......
T Consensus 110 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 142 (631)
T PRK07769 110 FDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEG 142 (631)
T ss_pred CCCCccchHHHHHHHHHhCCCCEEEEChHHHHH
Confidence 3222 13568888999999999887765443
No 234
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=26.64 E-value=1.5e+02 Score=32.81 Aligned_cols=79 Identities=11% Similarity=-0.054 Sum_probs=57.7
Q ss_pred EecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+. ......++.+++++....+-+.... ..+|+++..|+..+..+.......+...+++.++..+..
T Consensus 25 ~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~-~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 103 (502)
T TIGR01734 25 ELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHML-VAFLGSIKSGHAYIPVDTSIPSERIEMIIEAAGPELVIH 103 (502)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHH-HHHHHHHHhCCEEeCCCCcChHHHHHHHHHhcCCCEEEe
Confidence 578777654333 3334457889999888777765543 337789999998887776666678889999999999887
Q ss_pred chH
Q 004860 452 VPS 454 (727)
Q Consensus 452 ~P~ 454 (727)
...
T Consensus 104 ~~~ 106 (502)
T TIGR01734 104 TAE 106 (502)
T ss_pred ccc
Confidence 654
No 235
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=26.63 E-value=1.5e+02 Score=31.41 Aligned_cols=64 Identities=14% Similarity=0.135 Sum_probs=42.3
Q ss_pred HHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC-----CCHHHHHHHHHhcCeEEEEee
Q 004860 221 LVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (727)
Q Consensus 221 ~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (727)
.|--.|..+ +++||.|.+-.- -+....-|++.+|+.+|.+|-+ ..++.++..+..-.-.+++++
T Consensus 52 Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h 121 (363)
T PF01041_consen 52 ALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVH 121 (363)
T ss_dssp HHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE-
T ss_pred HHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEec
Confidence 344556678 999999987643 4556677899999999987764 568888888875553344444
No 236
>PRK08308 acyl-CoA synthetase; Validated
Probab=26.36 E-value=6e+02 Score=27.24 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=66.1
Q ss_pred CCCceEEEEecCCCCCCc--cceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCH--HHHHHHHHHHHhCCEEeec
Q 004860 189 EDNTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTV--RAVIIYLAIILAGYVVVSI 263 (727)
Q Consensus 189 ~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~--~~vva~lA~~kaGa~~vpl 263 (727)
.++.+|++....+ .+|. ...+|++.+...+..+.. .. +..+|++...+|-.- .++..++..+..|+..+..
T Consensus 99 ~~~~~~~i~~TSG-tTG~PKgv~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~ 174 (414)
T PRK08308 99 LAEEPSLLQYSSG-TTGEPKLIRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVII 174 (414)
T ss_pred CCCCceEEEECCC-CCCCCcEEEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEec
Confidence 4567777665432 2333 246788888765544443 34 678898887777653 4456788999999987776
Q ss_pred CCCCCHHHHHHHHHhcCeEEEEeecc
Q 004860 264 ADSFAAREIATRLRVSKAKGIFTQDF 289 (727)
Q Consensus 264 ~p~~~~~~l~~~l~~~~~~~il~~~~ 289 (727)
+ ...++.+...+++.++.++.....
T Consensus 175 ~-~~~~~~~~~~l~~~~~t~~~~~P~ 199 (414)
T PRK08308 175 T-NKNPKFALNILRNTPQHILYAVPL 199 (414)
T ss_pred C-CCCHHHHHHHHHHhCCeEEEcCHH
Confidence 4 456777888899999998877654
No 237
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=26.09 E-value=1.9e+02 Score=32.45 Aligned_cols=78 Identities=15% Similarity=0.058 Sum_probs=56.5
Q ss_pred EecChHHHH---HHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIR---CTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~---~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+.. .+.......++.++|++...++-+.... ..+++++..|+..+..+.......+...++..++..+++
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHP-INFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH-HHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 467776543 3333345578999999988887665433 336688889988887776666778999999999998876
Q ss_pred ch
Q 004860 452 VP 453 (727)
Q Consensus 452 ~P 453 (727)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 238
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=25.84 E-value=2.9e+02 Score=34.57 Aligned_cols=99 Identities=8% Similarity=-0.032 Sum_probs=69.3
Q ss_pred CCCCCeEEEEeCCCCCCCCCeEEecChHHHHHHHhhchhc--CCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 353 NPVDAVVNILFSSGTTGEPKAIPWTQLSSIRCTAEGWAHI--DLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 353 ~~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~~~~~~~~--~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
..|+++|.+.. +| -.+|.+.+...+......+ .+.++|++...++-+...- ..+++++..|+..+..+.
T Consensus 627 ~~p~~~a~~~~-~~-------~~~Ty~el~~~~~~~a~~L~~~~~~g~~V~i~~~n~~~~~-~~~la~~~~G~v~v~l~~ 697 (1146)
T PRK08633 627 RNWSRLAVADS-TG-------GELSYGKALTGALALARLLKRELKDEENVGILLPPSVAGA-LANLALLLAGKVPVNLNY 697 (1146)
T ss_pred hcCCCcEEEcC-CC-------CcCcHHHHHHHHHHHHHHHHHhCCCCCeEEEECCCchHHH-HHHHHHHHcCCEEEEeCC
Confidence 35778877632 22 1467776654433222211 3689999988887765543 336788999999888876
Q ss_pred CCChhhHHHHHHHhCCCEEEechHHHHHHH
Q 004860 431 SPLERSFGKFVQDAGVTVLGTVPSLVKAWR 460 (727)
Q Consensus 431 ~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~ 460 (727)
....+++...+++.+++.+...+.....+.
T Consensus 698 ~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~ 727 (1146)
T PRK08633 698 TASEAALKSAIEQAQIKTVITSRKFLEKLK 727 (1146)
T ss_pred CcCHHHHHHHHHHcCCCEEEEcHHHHHHHh
Confidence 667788999999999999998887776654
No 239
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=24.54 E-value=6.6e+02 Score=29.50 Aligned_cols=97 Identities=13% Similarity=0.183 Sum_probs=65.1
Q ss_pred CCCCceEEEEecCCCCCCc--cceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCC--CHHHHHHHHHHHHhCCEEee
Q 004860 188 KEDNTVAIVWREDRCDESA--VNLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPM--TVRAVIIYLAIILAGYVVVS 262 (727)
Q Consensus 188 ~~pd~~Al~~~~~~~~~~~--~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~--s~~~vva~lA~~kaGa~~vp 262 (727)
..+|.+|++....+ .+|. ...+|++.+...+..+.. .. +.++|++...+|- ...+...+++.+..|+..+.
T Consensus 362 ~~~~d~a~i~~TSG-TTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 362 QQPEDAALILFTSG-SEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCCeEEEEECCC-CCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 35678888765432 3333 247788887665544432 23 7899999888875 33445568889999999886
Q ss_pred cCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 263 IADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 263 l~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
.+.......+...+++.++..+....
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p 463 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTS 463 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchH
Confidence 65444556667778888888776554
No 240
>PRK12582 acyl-CoA synthetase; Provisional
Probab=24.26 E-value=2.1e+02 Score=33.03 Aligned_cols=96 Identities=11% Similarity=0.005 Sum_probs=61.4
Q ss_pred CCCCeEEEEeCCCCCCCCCeEEecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecC
Q 004860 354 PVDAVVNILFSSGTTGEPKAIPWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQG 430 (727)
Q Consensus 354 ~~~~~a~ii~TSGSTG~PKgV~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~ 430 (727)
.|+.++++....+ +| ..-.+|.+.+...+ .......++.++|++...++-+... +..+|+++..|+..+..+.
T Consensus 62 ~pd~~a~~~~~~~-~~--~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~p 137 (624)
T PRK12582 62 APDRPWLAQREPG-HG--QWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEH-ALMTLAAMQAGVPAAPVSP 137 (624)
T ss_pred CCCchheecccCC-CC--ceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeccC
Confidence 3566665432211 22 13467887765443 3333456899999998888755433 3346788999999887764
Q ss_pred CCC-----hhhHHHHHHHhCCCEEEech
Q 004860 431 SPL-----ERSFGKFVQDAGVTVLGTVP 453 (727)
Q Consensus 431 ~~~-----~~~l~~~i~~~~vt~l~~~P 453 (727)
... .+.+...++..++.+++...
T Consensus 138 ~~~~~~~~~~~l~~~l~~~~~~~vi~~~ 165 (624)
T PRK12582 138 AYSLMSHDHAKLKHLFDLVKPRVVFAQS 165 (624)
T ss_pred ccccccCCHHHHHHHHHhcCCcEEEecC
Confidence 332 36788888888888877643
No 241
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.19 E-value=2e+02 Score=32.56 Aligned_cols=81 Identities=12% Similarity=0.027 Sum_probs=58.0
Q ss_pred EecChHHHHHHHh---hchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+.. .....++.++|++...++-+... +..+|+++..|+..+..+.......+...++..+++.+..
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 4677766444333 33446788999998877666543 3446788999988887776667788999999999999888
Q ss_pred chHHH
Q 004860 452 VPSLV 456 (727)
Q Consensus 452 ~P~~l 456 (727)
.+...
T Consensus 128 ~~~~~ 132 (563)
T PRK06710 128 LDLVF 132 (563)
T ss_pred eccch
Confidence 76443
No 242
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=24.15 E-value=2.6e+02 Score=31.51 Aligned_cols=82 Identities=15% Similarity=-0.022 Sum_probs=58.9
Q ss_pred EecChHHHHHHHh---hchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTAE---GWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~~---~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|...+...+.. .....++.+++++...++-+... +..+|+++..|+..+..+.......+...+++.+++.++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 5777776443332 23346889999998776655443 3447788999999988876666788889999999998888
Q ss_pred chHHHH
Q 004860 452 VPSLVK 457 (727)
Q Consensus 452 ~P~~l~ 457 (727)
.+....
T Consensus 121 ~~~~~~ 126 (542)
T PRK07786 121 EAALAP 126 (542)
T ss_pred ccchHH
Confidence 766544
No 243
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=24.08 E-value=3.5e+02 Score=29.80 Aligned_cols=46 Identities=11% Similarity=0.034 Sum_probs=31.9
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHH-HHHhCCEEeec--------------CCCCCHHHHHHHHHhcC
Q 004860 230 FSKGDAIAIDMPMTVRAVIIYLA-IILAGYVVVSI--------------ADSFAAREIATRLRVSK 280 (727)
Q Consensus 230 v~~gd~Vai~~~~s~~~vva~lA-~~kaGa~~vpl--------------~p~~~~~~l~~~l~~~~ 280 (727)
+++||.| .+..++.+.-| +...|++++=+ .-+...+.++..|+..+
T Consensus 114 v~pGd~V-----p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 114 IKPGQYV-----PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred CCCcCEE-----CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 8999965 33445555555 78889987733 33567889999887654
No 244
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=23.77 E-value=1.9e+02 Score=32.43 Aligned_cols=79 Identities=13% Similarity=0.054 Sum_probs=56.3
Q ss_pred EecChHHHHHH---HhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCT---AEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~---~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+ .......++.+++++...++-+..... .+++++..|+..+..+.....+.+...+++.+++.+..
T Consensus 48 ~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~-~~la~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~ 126 (527)
T TIGR02275 48 QWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYI-VFFALLKLGIAPVLALFSHRKSELTAYAQQIEPALYII 126 (527)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHH-HHHHHHHcCeEEeccccccCHHHHHHHHHhcCCcEEEE
Confidence 57887764433 333445789999999888766554333 36788889988776665556678889999999988877
Q ss_pred chH
Q 004860 452 VPS 454 (727)
Q Consensus 452 ~P~ 454 (727)
.+.
T Consensus 127 ~~~ 129 (527)
T TIGR02275 127 DRA 129 (527)
T ss_pred cCc
Confidence 543
No 245
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=23.63 E-value=2.2e+02 Score=31.40 Aligned_cols=78 Identities=8% Similarity=-0.085 Sum_probs=56.7
Q ss_pred EecChHHHHHHH---hhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTA---EGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~---~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|.+.+...+. ......++.+++++....+-+... +..+|+++..|+..+..+.......+...++..++.+++.
T Consensus 27 ~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~-~~~~~a~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (503)
T PRK04813 27 KLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEM-LATFLGAVKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIA 105 (503)
T ss_pred EEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEecCCCCChHHHHHHHHHhcCCCEEEe
Confidence 478877755433 333456788899998887766553 3447788889998887776666678888999999988887
Q ss_pred ch
Q 004860 452 VP 453 (727)
Q Consensus 452 ~P 453 (727)
..
T Consensus 106 ~~ 107 (503)
T PRK04813 106 TE 107 (503)
T ss_pred cc
Confidence 54
No 246
>PF01037 AsnC_trans_reg: AsnC family; InterPro: IPR019887 The many bacterial transcription regulation proteins which bind DNA through a 'helix-turn-helix' motif can be classified into subfamilies on the basis of sequence similarities. One such family is the AsnC/Lrp subfamily []. The Lrp family of transcriptional regulators appears to be widely distributed among bacteria and archaea, as an important regulatory system of the amino acid metabolism and related processes []. Members of the Lrp family are small DNA-binding proteins with molecular masses of around 15 kDa. Target promoters often contain a number of binding sites that typically lack obvious inverted repeat elements, and to which binding is usually co-operative. LrpA from Pyrococcus furiosus is the first Lrp-like protein to date of which a three-dimensional structure has been solved. In the crystal structure LrpA forms an octamer consisting of four dimers. The structure revealed that the N-terminal part of the protein consists of a helix-turn-helix (HTH) domain, a fold generally involved in DNA binding. The C terminus of Lrp-like proteins has a beta-fold, where the two alpha-helices are located at one side of the four-stranded antiparallel beta-sheet. LrpA forms a homodimer mainly through interactions between the beta-strands of this C-terminal domain, and an octamer through further interactions between the second alpha-helix and fourth beta-strand of the motif. Hence, the C-terminal domain of Lrp-like proteins appears to be involved in ligand-response and activation [].; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 2DJW_F 2GQQ_A 2ZNY_E 2ZNZ_G 1RI7_A 2CYY_A 2E1C_A 2CG4_B 2DBB_B 1I1G_A ....
Probab=23.26 E-value=2.7e+02 Score=21.10 Aligned_cols=55 Identities=9% Similarity=0.109 Sum_probs=35.7
Q ss_pred echHHHHHHHhhcCCCceeeEEEeecCCCCCceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCc
Q 004860 622 TSSVEIERVCDQADESILETAAISVSPAGGGPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLF 689 (727)
Q Consensus 622 i~~~eIE~~l~~~~p~V~~a~vv~~~~~~~~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~ 689 (727)
-...++...|. .+|+|.+|..+.-. .-+.+.+..+ +.+++.+.+.+.+ ..+|...
T Consensus 10 ~~~~~~~~~l~-~~p~V~~~~~vtG~------~d~~~~v~~~-----d~~~l~~~i~~~l-~~~~gV~ 64 (74)
T PF01037_consen 10 DAYDEFAEALA-EIPEVVECYSVTGE------YDLILKVRAR-----DMEELEEFIREKL-RSIPGVR 64 (74)
T ss_dssp THHHHHHHHHH-TSTTEEEEEEESSS------SSEEEEEEES-----SHHHHHHHHHHTH-HTSTTEE
T ss_pred chHHHHHHHHH-cCCCEEEEEEEeCC------CCEEEEEEEC-----CHHHHHHHHHHHh-hcCCCEE
Confidence 44678888884 99999999877421 3455555543 4577877766655 3455433
No 247
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=23.06 E-value=2.6e+02 Score=30.51 Aligned_cols=78 Identities=6% Similarity=-0.075 Sum_probs=57.5
Q ss_pred EecChHHHHHHHhh---chhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhHHHHHHHhCCCEEEe
Q 004860 375 PWTQLSSIRCTAEG---WAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSFGKFVQDAGVTVLGT 451 (727)
Q Consensus 375 ~~th~~l~~~~~~~---~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~ 451 (727)
.+|++.+...+... ....++.++|++....+-+... +..+++++..|+..+..+.....+.+...+++.++.++..
T Consensus 28 ~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 106 (458)
T PRK09029 28 VLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPET-LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFALV 106 (458)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEE
Confidence 47887775544433 3346889999998877666543 3446788999999998877777778888999999988876
Q ss_pred ch
Q 004860 452 VP 453 (727)
Q Consensus 452 ~P 453 (727)
..
T Consensus 107 ~~ 108 (458)
T PRK09029 107 LE 108 (458)
T ss_pred cC
Confidence 54
No 248
>PF01514 YscJ_FliF: Secretory protein of YscJ/FliF family; InterPro: IPR006182 This domain is found in proteins that are related to the YscJ lipoprotein, where it covers most of the sequence, and the flagellar M-ring protein FliF, where it covers the N-terminal region. The members of the YscJ family are thought to be involved in secretion of several proteins. The FliF protein ring is thought to be part of the export apparatus for flagellar proteins, based on the similarity to YscJ proteins [].; PDB: 1YJ7_A 2Y9J_d.
Probab=22.81 E-value=3e+02 Score=26.63 Aligned_cols=79 Identities=18% Similarity=0.167 Sum_probs=45.4
Q ss_pred ecCceeechHHHHHHHhhcCCCceeeEEEeecCCCC------CceEEEEEEEecCCCCCChHHHHHHHHHHHHhhcCCCc
Q 004860 616 NLGGIKTSSVEIERVCDQADESILETAAISVSPAGG------GPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQSKLNPLF 689 (727)
Q Consensus 616 k~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~------~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~~L~~~~ 689 (727)
+.+=.|---+|+|+.|. ..++|..|-|...-.+.. ....--+++.+++|...+ +..+.|++.+....|. +
T Consensus 109 ~~~~~~ale~eL~~tI~-~i~gV~~A~V~l~~Pe~~~f~~~~~~~sASV~l~~~~g~~l~--~qv~~I~~LVa~sV~g-L 184 (206)
T PF01514_consen 109 KVNYQRALEGELERTIE-SIDGVESARVHLVLPERSVFGENQQPPSASVVLKLKPGSELS--EQVQGIQNLVASSVPG-L 184 (206)
T ss_dssp HHHHHHHHHHHHHHHHT-TSTTEEEEEEEEEE----BTTB----EEEEEEEEE-TTS--G--GGHHHHHHHHHHHSTT--
T ss_pred HHHHHHHHHHHHHHHHH-cCCCeeEEEEEEecCCccccccCCCCCeEEEEEEECCCCChH--HHHHHHHHHHHHhcCC-C
Confidence 33334445579999995 999999998754333221 112334455566666655 4445577777777754 7
Q ss_pred ccceEEEcC
Q 004860 690 KVSLVKVVP 698 (727)
Q Consensus 690 ~P~~i~~v~ 698 (727)
-|..+.++|
T Consensus 185 ~~enVtVvD 193 (206)
T PF01514_consen 185 KPENVTVVD 193 (206)
T ss_dssp -GGGEEEEE
T ss_pred CcccEEEEe
Confidence 778888877
No 249
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=22.70 E-value=2.3e+02 Score=30.35 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=39.5
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC-----CCHHHHHHHHHhcCeEEEEee
Q 004860 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (727)
Q Consensus 222 lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (727)
+...+... +++||.|.+-.+. +.....++...|+.++.++.+ ...+.+...+.. +.++|+..
T Consensus 59 L~~~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 59 LEMAALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 33345556 8899998875543 444556667889888777643 355667776653 56666543
No 250
>PF09664 DUF2399: Protein of unknown function C-terminus (DUF2399); InterPro: IPR024465 This domain is found in archaeal, bacterial and eukaryotic proteins. Its function is unknown.
Probab=22.58 E-value=5.9e+02 Score=23.20 Aligned_cols=112 Identities=10% Similarity=-0.041 Sum_probs=65.7
Q ss_pred eEEecChHHHHHHHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCChhhH---HHHHHHhCCCEE
Q 004860 373 AIPWTQLSSIRCTAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLERSF---GKFVQDAGVTVL 449 (727)
Q Consensus 373 gV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~~~l---~~~i~~~~vt~l 449 (727)
-.++.+.++...+... +...+..+..++=....+.+.++.-|...++-+.+.+++|++-+ ..++++++-+.+
T Consensus 21 V~VvENp~Vf~~~~~~-----~~~~~~pLVCt~G~p~~A~~~LL~~L~~~g~~l~y~GDfDp~Gl~IA~~l~~r~~~~~W 95 (152)
T PF09664_consen 21 VYVVENPAVFSALADE-----LGASCPPLVCTSGQPSAAARRLLDRLAAAGARLYYSGDFDPEGLRIANRLIQRYGARPW 95 (152)
T ss_pred EEEEecHHHHHHHHHh-----cCCCCCeEEEcCCcHHHHHHHHHHHHHhCCCEEEEecCCCHHHHHHHHHHHHHhCCccc
Confidence 5567778877766543 22234333333322333445566666665666667788888643 366788888889
Q ss_pred EechHHHHHHHhcCCCCCCCccceeEEEeecCCCChhhHHHHHhh
Q 004860 450 GTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSNVDDDLWLSSK 494 (727)
Q Consensus 450 ~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~~~~~~~~~~~ 494 (727)
.+.+.-+.............++ +..+ .+..+++...+++.
T Consensus 96 rm~~~dY~~~~~~~~~~~~~l~-l~~v----~p~~~~L~~~m~~~ 135 (152)
T PF09664_consen 96 RMDAEDYLAALSAEPLSGRRLK-LPNV----APWLPELAEAMRER 135 (152)
T ss_pred cCCHHHHHHhccccCCCCCcCC-cccC----ChhcHHHHHHHHHh
Confidence 9999888666655433333333 3322 35556666655544
No 251
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=21.56 E-value=5.7e+02 Score=27.36 Aligned_cols=58 Identities=14% Similarity=0.098 Sum_probs=28.3
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 230 v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
+++||.|.+..+.-......+-...+.+++-+...+....+.+...++. +.++|+...
T Consensus 87 l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~-~tklV~l~~ 144 (382)
T TIGR02080 87 LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQ-KPKLVLIET 144 (382)
T ss_pred cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCc-CceEEEEEC
Confidence 5677776655444333333222334444444444333445566665543 456665543
No 252
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=21.55 E-value=2.6e+02 Score=29.83 Aligned_cols=59 Identities=19% Similarity=0.174 Sum_probs=38.8
Q ss_pred HHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC-----CCHHHHHHHHHhcCeEEEEee
Q 004860 225 ALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (727)
Q Consensus 225 ~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (727)
.+... +++||.|.+-.+..+ ...-++...|+.++.++.+ ...+.++..+.. +.++|+..
T Consensus 62 ~l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 62 AALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 34445 789999887665544 3445667889887776542 457788877754 56666543
No 253
>PF00455 DeoRC: DeoR C terminal sensor domain; InterPro: IPR014036 The deoR-type HTH domain is a DNA-binding, helix-turn-helix (HTH) domain of about 50-60 amino acids present in transcription regulators of the deoR family, involved in sugar catabolism. This family of prokaryotic regulators is named after Escherichia coli deoR, a repressor of the deo operon, which encodes nucleotide and deoxyribonucleotide catabolic enzymes. DeoR also negatively regulates the expression of nupG and tsx, a nucleoside-specific transport protein and a channel-forming protein, respectively. DeoR-like transcription repressors occur in diverse bacteria as regulators of sugar and nucleoside metabolic systems. The effector molecules for deoR-like regulators are generally phosphorylated intermediates of the relevant metabolic pathway. The DNA-binding deoR-type HTH domain occurs usually in the N-terminal part. The C-terminal part can contain an effector-binding domain and/or an oligomerization domain. DeoR occurs as an octamer, whilst glpR and agaR are tetramers. Several operators may be bound simultaneously, which could facilitate DNA looping [, ].
Probab=21.13 E-value=2.6e+02 Score=25.72 Aligned_cols=83 Identities=14% Similarity=0.152 Sum_probs=52.6
Q ss_pred hhcCcEEEEecCCCChhhHHHHHHHh-CCCEEEechHHHHHHHhcCCCCCCCccceeEEEeecCCCC-------hhhHHH
Q 004860 419 FLNGATLALYQGSPLERSFGKFVQDA-GVTVLGTVPSLVKAWRNTNCLEGLDWTKIRSFASTGETSN-------VDDDLW 490 (727)
Q Consensus 419 l~~G~~lv~~~~~~~~~~l~~~i~~~-~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~i~~gGe~l~-------~~~~~~ 490 (727)
+..-+..++.+.......+.+.|.+. ++|++--...+...|.+. ++.+.++.||+.-+ +...+.
T Consensus 16 ~I~~~~~Ifld~GtT~~~la~~L~~~~~ltVvTnsl~ia~~l~~~--------~~~~vi~~GG~~~~~~~~~~G~~a~~~ 87 (161)
T PF00455_consen 16 LIEDGDTIFLDSGTTTLELAKYLPDKKNLTVVTNSLPIANELSEN--------PNIEVILLGGEVNPKSLSFVGPIALEA 87 (161)
T ss_pred hCCCCCEEEEECchHHHHHHHHhhcCCceEEEECCHHHHHHHHhc--------CceEEEEeCCEEEcCCCcEECchHHHH
Confidence 34444455555555556777888777 788887777778877654 37889999997543 223344
Q ss_pred HHhhCCCCccccccccccc
Q 004860 491 LSSKAWYNAIIESCGGTEL 509 (727)
Q Consensus 491 ~~~~~~~~~l~n~YG~TE~ 509 (727)
+.......-++..-|-++-
T Consensus 88 l~~~~~d~afi~~~gi~~~ 106 (161)
T PF00455_consen 88 LRQFRFDKAFIGADGISEE 106 (161)
T ss_pred HHhhccceEEecccEecCC
Confidence 4444444556666666653
No 254
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=21.06 E-value=3.9e+02 Score=29.35 Aligned_cols=56 Identities=14% Similarity=0.247 Sum_probs=44.6
Q ss_pred CCCCCceEEEEecCCCCCCccceecHHHHHHHHHHHHHHHHhhcCCCCEEEEEcCCCHHHHHH
Q 004860 187 RKEDNTVAIVWREDRCDESAVNLMTYKELREQVMLVANALDTMFSKGDAIAIDMPMTVRAVII 249 (727)
Q Consensus 187 ~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~v~~gd~Vai~~~~s~~~vva 249 (727)
+..-+..|+...+.. ..+|+++.+.++.++..+.+.+.++..+.|.+++..--+..
T Consensus 369 ~~~~~~~Alal~g~~-------~~~f~~iq~lA~~i~~~~~~~~~~~~Plivv~e~D~aKvLG 424 (473)
T PF06277_consen 369 EGEDQPVALALPGKP-------NPSFAEIQELAEAIAEGMAELINPDQPLIVVVEQDMAKVLG 424 (473)
T ss_pred cCCCCcEEEEeCCCC-------CCCHHHHHHHHHHHHHHHHhhccCCCCEEEEECchHHHHHH
Confidence 345577888877763 89999999999999999997788888888888887654443
No 255
>PRK09192 acyl-CoA synthetase; Validated
Probab=21.04 E-value=3.8e+02 Score=30.49 Aligned_cols=85 Identities=12% Similarity=-0.054 Sum_probs=58.5
Q ss_pred EEecChHHHHH---HHhhchhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCC-------hhhHHHHHHH
Q 004860 374 IPWTQLSSIRC---TAEGWAHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPL-------ERSFGKFVQD 443 (727)
Q Consensus 374 V~~th~~l~~~---~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~-------~~~l~~~i~~ 443 (727)
-.+|.+.+... +.......++.++|++..+++-+-.. +..+|+++..|+..+..+.... .+.+...+++
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF-VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH-HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 45787776433 33333456899999998877665332 3346788999999888853221 4678889999
Q ss_pred hCCCEEEechHHHHHH
Q 004860 444 AGVTVLGTVPSLVKAW 459 (727)
Q Consensus 444 ~~vt~l~~~P~~l~~l 459 (727)
.++..+.........+
T Consensus 127 ~~~~~il~~~~~~~~~ 142 (579)
T PRK09192 127 AQPAAIITPDELLPWV 142 (579)
T ss_pred cCCCEEEeChHHHHHH
Confidence 9999998877655443
No 256
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=20.98 E-value=4e+02 Score=30.01 Aligned_cols=94 Identities=16% Similarity=-0.019 Sum_probs=63.5
Q ss_pred EEEEeCCCCCCCCCeEEecChHHHHH---HHhhc-hhcCCCCCCEEEEecccccccchHHhHHhhhcCcEEEEecCCCCh
Q 004860 359 VNILFSSGTTGEPKAIPWTQLSSIRC---TAEGW-AHIDLKVGDVYCWPTNLGWVMGPVILFSSFLNGATLALYQGSPLE 434 (727)
Q Consensus 359 a~ii~TSGSTG~PKgV~~th~~l~~~---~~~~~-~~~~~~~~d~~l~~~~~~~~~~~~~~~~~l~~G~~lv~~~~~~~~ 434 (727)
..++|-+-.++. -.+|.+.+... +.... +..+. +|||++.++|........ ++++.-.|+..+.+...+.+
T Consensus 27 ~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a-~LA~~riGAI~~~vf~~f~~ 101 (528)
T COG0365 27 TAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIA-LLATARIGAIPAVVSPGLSA 101 (528)
T ss_pred eEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHH-HHHHHHcCCEEeecccCCCH
Confidence 445555444444 55677665433 33333 34567 999999999988765443 66888888877776666677
Q ss_pred hhHHHHHHHhCCCEEEechHHHH
Q 004860 435 RSFGKFVQDAGVTVLGTVPSLVK 457 (727)
Q Consensus 435 ~~l~~~i~~~~vt~l~~~P~~l~ 457 (727)
+.+..-|...++.++.+....++
T Consensus 102 ~al~~Ri~d~~~k~vit~d~~~~ 124 (528)
T COG0365 102 EAVADRIADLGPKVLIADDGTFR 124 (528)
T ss_pred HHHHHHHHccCCCEEEEeccccc
Confidence 88888889888888887655444
No 257
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=20.36 E-value=2.2e+02 Score=30.44 Aligned_cols=64 Identities=19% Similarity=0.193 Sum_probs=48.0
Q ss_pred HHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCC-----CCHHHHHHHHHhcCeEEEEee
Q 004860 220 MLVANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADS-----FAAREIATRLRVSKAKGIFTQ 287 (727)
Q Consensus 220 ~~lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~-----~~~~~l~~~l~~~~~~~il~~ 287 (727)
..|.-.|+.+ +++||-|.+ .+.-++...=+++..|+.+|-+|-+ .+++.++..|... .|.||.-
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 3455667777 999995543 4667888999999999999987764 5788899888875 5555543
No 258
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=20.36 E-value=5.6e+02 Score=27.35 Aligned_cols=67 Identities=15% Similarity=0.225 Sum_probs=49.8
Q ss_pred HHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 222 VANALDTM-FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 222 lA~~L~~~-v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
+...+.+- ++||....|....+-.-+..-++|...|.-+..+-|...+..-..+++..++++++++.
T Consensus 98 l~~a~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 98 IEDAEKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHHHHHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 44444444 77885555556667777777778889998888887876666677899999999999874
No 259
>PHA02553 6 baseplate wedge subunit; Provisional
Probab=20.26 E-value=2.7e+02 Score=31.72 Aligned_cols=73 Identities=14% Similarity=0.018 Sum_probs=46.7
Q ss_pred ecCCeeecCceeechHHHHHHHhhcCCCceeeEEEeecCCCC-CceEEEEEEEecCCCCCChHHHHHHHHHHHHh
Q 004860 610 RADDTMNLGGIKTSSVEIERVCDQADESILETAAISVSPAGG-GPEVLVIFVVLKKGFTSQPDKLKMIFSKAIQS 683 (727)
Q Consensus 610 R~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~-~~~~l~a~vv~~~~~~~~~~~l~~~l~~~l~~ 683 (727)
|.-.+...++.-|.+.+-|....+.+|+|..+.++....... ....+...|+++.+..++ ..+++.|+++|.+
T Consensus 303 ~AP~~~rt~~RAVTa~DYE~lA~~~~p~V~rA~~~~~~~~spp~~G~V~VvVvP~~g~~ls-~~l~~~I~~yL~~ 376 (611)
T PHA02553 303 LAPRMREAQRRAVTASDYEAFVSERFGSIVQAVQCGGDSLKPPVYGYVFIAVKPKSGLYLT-DVQKEDIKNYLKK 376 (611)
T ss_pred hhhHhhhcccccccHHHHHHHHHhhCCccEEEEEccCCcCCCCCCceEEEEEecCCCCCCC-HHHHHHHHHHHHh
Confidence 334444556677899999999864589999988765322222 002455566777666565 5677777777754
No 260
>PLN02565 cysteine synthase
Probab=20.19 E-value=6.5e+02 Score=26.21 Aligned_cols=59 Identities=14% Similarity=0.132 Sum_probs=45.2
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 230 v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
+.+|....|....+-.-+..-+++...|..++.+-|...++.....++..+++++++++
T Consensus 63 ~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 63 IKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred CCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 57885545555556566666677888999888877877777778889999999999875
No 261
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=20.12 E-value=5.5e+02 Score=27.55 Aligned_cols=57 Identities=18% Similarity=0.255 Sum_probs=31.7
Q ss_pred cCCCCEEEEEcCCCHHHHHHHHHHHHhCCEEeecCCCCCHHHHHHHHHhcCeEEEEeec
Q 004860 230 FSKGDAIAIDMPMTVRAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQD 288 (727)
Q Consensus 230 v~~gd~Vai~~~~s~~~vva~lA~~kaGa~~vpl~p~~~~~~l~~~l~~~~~~~il~~~ 288 (727)
+++||.|.+..+.-......+-.+.+.|+.+...+++ .+.+...++..+.++|+++.
T Consensus 89 l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~~d--~~~l~~~i~~~~tklV~ie~ 145 (385)
T PRK08574 89 LKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAYPS--TEDIIEAIKEGRTKLVFIET 145 (385)
T ss_pred hCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEECCC--HHHHHHhcCccCceEEEEEC
Confidence 6788887766554443333322234456655554443 45666666544566776654
No 262
>PRK07638 acyl-CoA synthetase; Validated
Probab=20.09 E-value=7.8e+02 Score=26.95 Aligned_cols=95 Identities=9% Similarity=0.091 Sum_probs=62.4
Q ss_pred CceEEEEecCCCCCCcc--ceecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHH-HHHHHHHHHHhCCEEeecCCC
Q 004860 191 NTVAIVWREDRCDESAV--NLMTYKELREQVMLVANALDTM-FSKGDAIAIDMPMTVR-AVIIYLAIILAGYVVVSIADS 266 (727)
Q Consensus 191 d~~Al~~~~~~~~~~~~--~~lTY~eL~~~a~~lA~~L~~~-v~~gd~Vai~~~~s~~-~vva~lA~~kaGa~~vpl~p~ 266 (727)
+.+|++.... |.+|.. ..+|.+.+...+... .... ++++|++....+-... .+..++..+..|+..+.. +.
T Consensus 143 ~~~a~i~~TS-GtTG~PKgv~~s~~~~~~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~ 217 (487)
T PRK07638 143 NAPFYMGFTS-GSTGKPKAFLRAQQSWLHSFDCN---VHDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RK 217 (487)
T ss_pred CCcEEEEeCC-CCCCCCcEEEEecHHHHHHHHHH---HHhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CC
Confidence 4456554432 223332 356776665544332 3334 7899999877665433 355667778889988765 56
Q ss_pred CCHHHHHHHHHhcCeEEEEeeccc
Q 004860 267 FAAREIATRLRVSKAKGIFTQDFI 290 (727)
Q Consensus 267 ~~~~~l~~~l~~~~~~~il~~~~~ 290 (727)
+.++++...+++.++.++......
T Consensus 218 ~~~~~~~~~i~~~~~t~~~~~P~~ 241 (487)
T PRK07638 218 FIPNQVLDKLETENISVMYTVPTM 241 (487)
T ss_pred CCHHHHHHHHHHcCCeEEEeCcHH
Confidence 778889999999999999887643
Done!