BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004864
(726 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P61872|LIP_RHIOR Lipase OS=Rhizopus oryzae PE=1 SV=1
Length = 392
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 397 VHRGIYEAAKGIYEQMLPEVHAHLKACGKHATFRF--TGHSLGGSLSVLINLMLLIRGEV 454
VH G + + + P V L A H T++ TGHSLGG+ ++L + L R
Sbjct: 231 VHAGFLSSYEQVVNDYFPVVQEQLTA---HPTYKVIVTGHSLGGAQALLAGMDLYQREPR 287
Query: 455 PASSLLPVITFGAPSIMCGGD----HLLRKLGLPRSHVQSITLHRDIVP 499
+ L + T G P + G+ + + G+P Q RDIVP
Sbjct: 288 LSPKNLSIFTVGGPRV---GNPTFAYYVESTGIP---FQRTVHKRDIVP 330
>sp|P61871|LIP_RHINI Lipase OS=Rhizopus niveus PE=1 SV=1
Length = 392
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 15/109 (13%)
Query: 397 VHRGIYEAAKGIYEQMLPEVHAHLKACGKHATFRF--TGHSLGGSLSVLINLMLLIRGEV 454
VH G + + + P V L A H T++ TGHSLGG+ ++L + L R
Sbjct: 231 VHAGFLSSYEQVVNDYFPVVQEQLTA---HPTYKVIVTGHSLGGAQALLAGMDLYQREPR 287
Query: 455 PASSLLPVITFGAPSIMCGGD----HLLRKLGLPRSHVQSITLHRDIVP 499
+ L + T G P + G+ + + G+P Q RDIVP
Sbjct: 288 LSPKNLSIFTVGGPRV---GNPTFAYYVESTGIP---FQRTVHKRDIVP 330
>sp|A2WTA0|PLA3_ORYSI Phospholipase A1-II 3 OS=Oryza sativa subsp. indica GN=OsI_03088
PE=3 SV=1
Length = 420
Score = 37.7 bits (86), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 410 EQMLPEVHAHLKAC-GKHATFRFTGHSLGGSLSVLINLMLLIRG-EVPASSLLPV----I 463
EQ+L E+ L+A ++ + TGHSLG +LS L + ++ G V SS +PV I
Sbjct: 214 EQVLAEITRLLRAYKNENCSITITGHSLGAALSTLNAIDIVANGYNVRGSSRVPVPVTAI 273
Query: 464 TFGAPSIMCGGDHLLRKL-GLPRSHVQSITLHRDIVPRAFSCNYPNHV-AELLKAVNRNF 521
+P + G D R P + + DIVP + V AELL +
Sbjct: 274 ALASPRV--GDDQFKRAFDSTPNLSLLRVRNAPDIVPTILPSAFFKDVGAELLV----DT 327
Query: 522 RNHPCLNN 529
R P L N
Sbjct: 328 RRSPYLKN 335
>sp|Q8RZ40|PLA3_ORYSJ Phospholipase A1-II 3 OS=Oryza sativa subsp. japonica
GN=Os01g0651800 PE=2 SV=1
Length = 420
Score = 36.6 bits (83), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 22/132 (16%)
Query: 410 EQMLPEVHAHLKAC-GKHATFRFTGHSLGGSLSVLINLMLLIRG-EVPASSLLPV----I 463
EQ+L E+ L+A ++ + TGHSLG +LS L + ++ G V SS +PV I
Sbjct: 214 EQVLAEITRLLRAYKNENCSITITGHSLGAALSTLNAIDIVANGYNVRGSSRVPVPVTAI 273
Query: 464 TFGAPSIMCGGDHLLRKLGLPRSHVQSITLHR-----DIVPRAFSCNYPNHV-AELLKAV 517
+P + G D R +++L R DIVP + V AELL
Sbjct: 274 ALASPRV--GDDQFKRAF----DSTSNLSLLRVRNAPDIVPTILPSAFFKDVGAELLV-- 325
Query: 518 NRNFRNHPCLNN 529
+ R P L N
Sbjct: 326 --DTRRSPYLKN 335
>sp|P47977|CTH2_YEAST mRNA decay factor CTH2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TIS11 PE=1 SV=1
Length = 285
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 488 VQSITLHRDIVPRAFSCNYPNHVAEL-LKAVNRNFRNHPCLNNQKLLYAPMG 538
+S TL + P C + + + EL +K +NFR PC+N +KL Y P G
Sbjct: 175 CESFTL-KGSCPYGSKCQFAHGLGELKVKKSCKNFRTKPCVNWEKLGYCPYG 225
>sp|A7TG13|ATG15_VANPO Putative lipase ATG15 OS=Vanderwaltozyma polyspora (strain ATCC
22028 / DSM 70294) GN=ATG15 PE=3 SV=1
Length = 565
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 20/85 (23%)
Query: 402 YEAAKGIYEQMLPEVHAHLKACGKHATFRFTGHSLGGSLSVLINLMLLIRGEVPASSLLP 461
Y+AA IY+ L + HAT TGHSLGG+L+ L+ + LP
Sbjct: 322 YQAAMDIYKDTLRQY--------PHATIWLTGHSLGGALASLVG----------RTYGLP 363
Query: 462 VITFGAPSIMCGGD--HLLRKLGLP 484
+ F +P + HL GLP
Sbjct: 364 TVAFESPGELLAAKRLHLPFPPGLP 388
>sp|O82274|PLA19_ARATH Phospholipase A1-IIbeta OS=Arabidopsis thaliana GN=At2g31100 PE=1
SV=2
Length = 414
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 427 ATFRFTGHSLGGSLSVLINLMLL------IRGEVPASSLLPVITFGAPSIMCGGDHLLRK 480
T TGHSLG +S+L L I + S + V FG+P I GD ++
Sbjct: 215 VTITLTGHSLGAVMSILSAADFLHNEWPKITPSLQHSLCVTVFAFGSPQI---GDRSFKR 271
Query: 481 L--GLPRSHVQSITLHRDIVPR 500
L L H+ +T D++PR
Sbjct: 272 LVESLEHLHILRVTNVPDLIPR 293
>sp|P19515|LIP_RHIMI Lipase OS=Rhizomucor miehei PE=1 SV=2
Length = 363
Score = 34.7 bits (78), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 397 VHRGIYEAAKGIYEQMLPEVHAHLKACGKHATFRF--TGHSLGGSLSVLINLMLLIRGEV 454
VH+G ++ + +++ V K ++ +++ TGHSLGG+ ++L L L R E
Sbjct: 201 VHKGFLDSYGEVQNELVATVLDQFK---QYPSYKVAVTGHSLGGATALLCALDLYQREEG 257
Query: 455 PASSLLPVITFGAPSIMCGGD----HLLRKLGLPRSHVQSITLHRDIVP 499
+SS L + T G P + GD + + G+P + RDIVP
Sbjct: 258 LSSSNLFLYTQGQPRV---GDPAFANYVVSTGIPYRRTVN---ERDIVP 300
>sp|Q8ZCR0|HMP_YERPE Flavohemoprotein OS=Yersinia pestis GN=hmp PE=3 SV=1
Length = 396
Score = 34.3 bits (77), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 501 AFSCNYPNHVAELLKAVNRNFRNHPCLNNQKLLYAPMGELLILQPDEKFSPHHPLLPSGS 560
A++ N N +A LL V R + H LN Q Y +GE LI DE FSP +L + +
Sbjct: 63 AYATNIEN-LAALLPTVERIAQKHTSLNIQPEHYPIVGEHLIATLDELFSPGQAVLDAWA 121
Query: 561 GLY 563
Y
Sbjct: 122 KAY 124
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 275,785,817
Number of Sequences: 539616
Number of extensions: 12293938
Number of successful extensions: 46145
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 45242
Number of HSP's gapped (non-prelim): 739
length of query: 726
length of database: 191,569,459
effective HSP length: 125
effective length of query: 601
effective length of database: 124,117,459
effective search space: 74594592859
effective search space used: 74594592859
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)