Query 004866
Match_columns 726
No_of_seqs 487 out of 4051
Neff 9.5
Searched_HMMs 46136
Date Thu Mar 28 14:13:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004866.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004866hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1770 PtrB Protease II [Amin 100.0 5E-115 1E-119 912.3 66.4 644 1-725 30-680 (682)
2 PRK10115 protease 2; Provision 100.0 5E-98 1E-102 847.5 79.5 645 1-726 26-678 (686)
3 KOG2237 Predicted serine prote 100.0 9.2E-94 2E-98 743.9 46.5 658 1-726 31-708 (712)
4 COG1505 Serine proteases of th 100.0 2.1E-69 4.6E-74 560.4 51.4 620 1-725 9-648 (648)
5 PF02897 Peptidase_S9_N: Proly 100.0 3.3E-49 7.2E-54 431.5 44.4 374 1-415 25-413 (414)
6 COG1506 DAP2 Dipeptidyl aminop 100.0 3.1E-46 6.8E-51 422.6 49.9 524 124-726 62-619 (620)
7 KOG2281 Dipeptidyl aminopeptid 100.0 1.2E-33 2.5E-38 293.3 32.5 298 382-722 559-866 (867)
8 KOG2100 Dipeptidyl aminopeptid 100.0 3.3E-29 7E-34 285.4 49.1 238 474-725 506-749 (755)
9 PF00326 Peptidase_S9: Prolyl 100.0 6E-32 1.3E-36 267.5 16.2 210 510-725 1-211 (213)
10 PRK10566 esterase; Provisional 99.8 5E-20 1.1E-24 187.1 20.9 229 478-724 12-249 (249)
11 PRK13604 luxD acyl transferase 99.8 2E-19 4.3E-24 181.0 22.8 224 464-705 8-247 (307)
12 PRK05077 frsA fermentation/res 99.8 7.7E-19 1.7E-23 189.5 25.0 242 462-725 165-414 (414)
13 PLN02442 S-formylglutathione h 99.8 2.5E-18 5.4E-23 176.8 23.4 247 462-726 15-283 (283)
14 PLN02298 hydrolase, alpha/beta 99.8 3.6E-18 7.8E-23 181.0 25.2 253 461-725 28-319 (330)
15 PF05448 AXE1: Acetyl xylan es 99.8 8.2E-19 1.8E-23 181.2 17.9 246 461-723 52-320 (320)
16 TIGR02821 fghA_ester_D S-formy 99.8 9.4E-18 2E-22 172.3 24.1 242 463-724 11-275 (275)
17 COG3458 Acetyl esterase (deace 99.8 6.9E-18 1.5E-22 160.2 16.9 230 460-705 51-303 (321)
18 COG1647 Esterase/lipase [Gener 99.8 4.9E-18 1.1E-22 157.1 13.4 211 494-721 15-242 (243)
19 PLN02385 hydrolase; alpha/beta 99.8 6.7E-17 1.5E-21 172.4 23.8 250 462-724 58-346 (349)
20 TIGR02800 propeller_TolB tol-p 99.8 2.1E-16 4.6E-21 173.4 27.1 278 20-347 118-397 (417)
21 PRK05371 x-prolyl-dipeptidyl a 99.7 1.7E-16 3.7E-21 182.2 25.5 256 460-725 165-521 (767)
22 COG0412 Dienelactone hydrolase 99.7 1.8E-16 3.9E-21 157.1 22.1 215 467-726 4-236 (236)
23 PRK10162 acetyl esterase; Prov 99.7 3.5E-16 7.7E-21 163.8 24.8 231 463-725 55-317 (318)
24 PHA02857 monoglyceride lipase; 99.7 2E-16 4.4E-21 163.2 22.3 236 470-723 5-273 (276)
25 PRK01029 tolB translocation pr 99.7 1.5E-15 3.3E-20 165.1 29.5 210 125-349 188-405 (428)
26 PF01738 DLH: Dienelactone hyd 99.7 1.9E-17 4E-22 164.3 12.9 204 478-724 1-218 (218)
27 PRK10749 lysophospholipase L2; 99.7 8.4E-16 1.8E-20 162.4 25.9 247 466-723 31-329 (330)
28 TIGR01840 esterase_phb esteras 99.7 1.4E-16 3.1E-21 157.1 17.7 192 480-684 1-197 (212)
29 PRK04792 tolB translocation pr 99.7 4.2E-15 9.1E-20 162.9 31.1 204 124-347 220-425 (448)
30 PRK05137 tolB translocation pr 99.7 5.8E-15 1.3E-19 162.1 30.6 205 124-348 204-413 (435)
31 PRK04043 tolB translocation pr 99.7 9.2E-15 2E-19 157.8 30.9 209 125-348 191-401 (419)
32 KOG1455 Lysophospholipase [Lip 99.7 2.1E-15 4.5E-20 147.2 20.0 248 463-723 25-312 (313)
33 PLN02652 hydrolase; alpha/beta 99.7 5.4E-15 1.2E-19 158.3 24.9 245 464-725 109-389 (395)
34 PRK00178 tolB translocation pr 99.7 2.7E-14 5.8E-19 157.1 30.7 205 124-348 201-407 (430)
35 PRK03629 tolB translocation pr 99.7 4.7E-14 1E-18 154.0 30.8 205 124-348 201-407 (429)
36 KOG1552 Predicted alpha/beta h 99.7 4E-15 8.6E-20 142.5 18.5 211 464-714 34-246 (258)
37 PRK01029 tolB translocation pr 99.7 4.4E-14 9.6E-19 153.6 29.2 259 127-415 142-412 (428)
38 PRK02889 tolB translocation pr 99.7 4.2E-14 9.1E-19 154.6 29.2 204 124-347 198-403 (427)
39 COG2267 PldB Lysophospholipase 99.7 6.5E-15 1.4E-19 151.6 21.5 243 465-725 9-296 (298)
40 PRK04043 tolB translocation pr 99.7 6E-14 1.3E-18 151.5 29.8 246 134-414 155-408 (419)
41 PRK05137 tolB translocation pr 99.7 5.3E-14 1.1E-18 154.5 29.7 251 132-414 164-420 (435)
42 PRK04922 tolB translocation pr 99.7 6.9E-14 1.5E-18 153.4 29.7 205 124-348 206-412 (433)
43 PF02129 Peptidase_S15: X-Pro 99.6 2.3E-15 5.1E-20 154.4 14.3 202 474-685 1-257 (272)
44 PRK04792 tolB translocation pr 99.6 8E-14 1.7E-18 152.8 26.0 160 125-299 265-425 (448)
45 COG0657 Aes Esterase/lipase [L 99.6 1.3E-14 2.9E-19 152.2 18.6 228 471-722 57-309 (312)
46 PRK11460 putative hydrolase; P 99.6 3.9E-14 8.5E-19 141.2 20.3 183 492-724 14-209 (232)
47 TIGR00976 /NonD putative hydro 99.6 2.3E-14 4.9E-19 161.7 20.5 135 470-613 1-137 (550)
48 PRK03629 tolB translocation pr 99.6 6.1E-13 1.3E-17 145.3 29.6 248 134-414 164-414 (429)
49 PF10503 Esterase_phd: Esteras 99.6 6.6E-14 1.4E-18 135.7 17.6 192 479-684 2-198 (220)
50 PF06500 DUF1100: Alpha/beta h 99.6 5.5E-14 1.2E-18 146.0 17.8 240 461-724 161-410 (411)
51 PRK00178 tolB translocation pr 99.6 1.1E-12 2.4E-17 144.3 28.9 258 123-414 153-414 (430)
52 TIGR01607 PST-A Plasmodium sub 99.6 1.3E-13 2.8E-18 145.4 20.2 237 470-721 2-331 (332)
53 PRK01742 tolB translocation pr 99.6 1.5E-12 3.2E-17 142.6 29.3 199 123-347 205-404 (429)
54 PRK02889 tolB translocation pr 99.6 1.7E-12 3.6E-17 142.0 29.5 246 134-414 164-411 (427)
55 PRK04922 tolB translocation pr 99.6 1.4E-12 3E-17 143.2 28.8 249 133-414 167-419 (433)
56 KOG4391 Predicted alpha/beta h 99.6 5.3E-14 1.2E-18 129.0 14.2 216 460-704 49-265 (300)
57 KOG1515 Arylacetamide deacetyl 99.6 3E-13 6.5E-18 138.9 21.1 241 463-723 61-335 (336)
58 PRK10985 putative hydrolase; P 99.5 5.4E-13 1.2E-17 140.6 20.4 244 465-725 31-322 (324)
59 PLN02511 hydrolase 99.5 5.9E-13 1.3E-17 143.3 20.8 141 464-610 70-212 (388)
60 TIGR03100 hydr1_PEP hydrolase, 99.5 1.2E-12 2.6E-17 134.3 20.9 237 467-722 4-274 (274)
61 PF12695 Abhydrolase_5: Alpha/ 99.5 3.1E-13 6.8E-18 124.6 13.9 145 496-702 1-145 (145)
62 PRK00870 haloalkane dehalogena 99.5 3.1E-12 6.7E-17 133.8 23.1 129 465-607 21-149 (302)
63 COG0823 TolB Periplasmic compo 99.5 1.7E-12 3.6E-17 139.1 20.5 161 125-299 241-402 (425)
64 PF07859 Abhydrolase_3: alpha/ 99.5 6.9E-14 1.5E-18 138.1 8.3 186 497-703 1-209 (211)
65 PLN00021 chlorophyllase 99.5 4.1E-12 8.9E-17 131.5 21.4 183 475-703 36-241 (313)
66 TIGR03343 biphenyl_bphD 2-hydr 99.5 1.1E-12 2.4E-17 135.7 17.2 208 494-721 30-281 (282)
67 PF12715 Abhydrolase_7: Abhydr 99.5 1.6E-13 3.5E-18 139.8 10.2 144 460-607 83-259 (390)
68 TIGR03611 RutD pyrimidine util 99.5 1.5E-12 3.3E-17 132.3 17.2 208 493-721 12-256 (257)
69 TIGR02800 propeller_TolB tol-p 99.5 4.7E-11 1E-15 131.0 29.2 251 130-413 152-404 (417)
70 PF02230 Abhydrolase_2: Phosph 99.4 3.6E-12 7.7E-17 126.0 16.9 188 492-724 12-216 (216)
71 COG2945 Predicted hydrolase of 99.4 4.6E-12 1E-16 115.1 15.1 197 466-720 5-204 (210)
72 PRK11071 esterase YqiA; Provis 99.4 4.9E-12 1.1E-16 121.8 16.5 183 495-720 2-188 (190)
73 PRK01742 tolB translocation pr 99.4 1.1E-10 2.3E-15 128.0 28.4 242 133-414 168-412 (429)
74 TIGR03056 bchO_mg_che_rel puta 99.4 2.5E-11 5.3E-16 125.2 22.1 104 494-609 28-131 (278)
75 PLN02824 hydrolase, alpha/beta 99.4 1.5E-11 3.3E-16 128.1 20.0 109 494-608 29-137 (294)
76 PF00930 DPPIV_N: Dipeptidyl p 99.4 1.2E-10 2.7E-15 124.1 27.0 242 124-398 45-353 (353)
77 PRK03592 haloalkane dehalogena 99.4 3.6E-11 7.7E-16 125.4 22.0 114 473-607 14-127 (295)
78 COG4099 Predicted peptidase [G 99.4 6.9E-12 1.5E-16 120.9 14.6 169 473-686 169-346 (387)
79 PLN02965 Probable pheophorbida 99.4 3.2E-11 7E-16 122.8 20.7 101 496-607 5-106 (255)
80 TIGR02427 protocat_pcaD 3-oxoa 99.4 5.9E-12 1.3E-16 127.0 14.8 191 493-704 12-235 (251)
81 COG0823 TolB Periplasmic compo 99.4 5.1E-11 1.1E-15 127.8 22.5 206 124-347 195-402 (425)
82 TIGR03101 hydr2_PEP hydrolase, 99.4 9.8E-11 2.1E-15 117.9 23.2 207 468-687 3-234 (266)
83 COG3509 LpqC Poly(3-hydroxybut 99.4 3E-11 6.6E-16 117.7 18.6 184 474-684 43-237 (312)
84 TIGR01250 pro_imino_pep_2 prol 99.4 3.9E-11 8.4E-16 124.0 20.9 107 494-608 25-131 (288)
85 TIGR01249 pro_imino_pep_1 prol 99.4 2E-11 4.4E-16 127.7 19.0 123 469-608 8-130 (306)
86 TIGR02240 PHA_depoly_arom poly 99.4 2.7E-11 5.9E-16 124.9 19.5 222 473-722 9-265 (276)
87 PRK03204 haloalkane dehalogena 99.4 5.6E-11 1.2E-15 123.0 20.4 125 462-607 11-135 (286)
88 PLN03087 BODYGUARD 1 domain co 99.4 8.4E-11 1.8E-15 127.8 22.3 123 472-608 182-309 (481)
89 PLN02872 triacylglycerol lipas 99.4 1E-11 2.2E-16 132.5 15.0 145 460-608 39-197 (395)
90 PRK10673 acyl-CoA esterase; Pr 99.4 3.7E-11 8E-16 122.3 18.6 100 492-605 14-113 (255)
91 TIGR03695 menH_SHCHC 2-succiny 99.3 4.9E-11 1.1E-15 120.0 18.1 104 495-609 2-106 (251)
92 COG0429 Predicted hydrolase of 99.3 1.2E-10 2.7E-15 115.7 19.5 238 469-724 53-341 (345)
93 PF12697 Abhydrolase_6: Alpha/ 99.3 3.2E-12 7E-17 126.7 8.5 188 497-703 1-217 (228)
94 TIGR01836 PHA_synth_III_C poly 99.3 6.9E-11 1.5E-15 126.1 18.5 108 493-611 62-174 (350)
95 KOG4178 Soluble epoxide hydrol 99.3 4.1E-10 8.9E-15 112.4 22.4 104 492-606 42-146 (322)
96 PLN02211 methyl indole-3-aceta 99.3 1.6E-10 3.5E-15 118.5 19.7 107 491-607 15-121 (273)
97 PLN02894 hydrolase, alpha/beta 99.3 3E-10 6.5E-15 122.9 22.0 127 468-607 82-210 (402)
98 TIGR01738 bioH putative pimelo 99.3 8.3E-11 1.8E-15 118.2 16.1 96 495-608 5-100 (245)
99 PLN02679 hydrolase, alpha/beta 99.3 2.7E-10 5.8E-15 121.9 19.7 101 495-607 89-190 (360)
100 PF08840 BAAT_C: BAAT / Acyl-C 99.2 4.8E-11 1E-15 117.0 12.0 165 554-725 3-212 (213)
101 KOG1838 Alpha/beta hydrolase [ 99.2 7.8E-10 1.7E-14 114.3 20.3 197 465-672 93-339 (409)
102 PRK06489 hypothetical protein; 99.2 2E-10 4.3E-15 123.1 16.7 139 460-607 31-188 (360)
103 TIGR01392 homoserO_Ac_trn homo 99.2 3.3E-10 7.2E-15 121.0 17.8 130 474-608 14-162 (351)
104 PRK10349 carboxylesterase BioH 99.2 3.2E-10 7E-15 115.5 16.6 95 495-607 14-108 (256)
105 KOG3101 Esterase D [General fu 99.2 1.1E-10 2.4E-15 107.0 11.1 210 475-702 25-261 (283)
106 PRK14875 acetoin dehydrogenase 99.2 4.5E-10 9.7E-15 121.2 17.2 102 493-607 130-231 (371)
107 PLN02578 hydrolase 99.2 1.2E-09 2.5E-14 116.8 19.4 100 495-607 87-186 (354)
108 COG0400 Predicted esterase [Ge 99.2 1.2E-09 2.5E-14 105.0 16.9 186 491-724 15-206 (207)
109 COG2936 Predicted acyl esteras 99.2 1.3E-10 2.8E-15 125.1 11.4 143 461-612 15-163 (563)
110 PF00756 Esterase: Putative es 99.1 2.8E-11 6.1E-16 122.9 5.1 135 475-611 5-153 (251)
111 PRK07581 hypothetical protein; 99.1 7.1E-10 1.5E-14 118.0 15.2 110 493-607 40-158 (339)
112 PRK00175 metX homoserine O-ace 99.1 2.8E-09 6E-14 114.8 19.7 113 494-608 48-182 (379)
113 PRK11126 2-succinyl-6-hydroxy- 99.1 3.7E-09 8E-14 106.6 19.0 99 495-608 3-102 (242)
114 KOG4667 Predicted esterase [Li 99.1 3.3E-09 7.1E-14 98.1 16.5 223 464-709 9-246 (269)
115 PRK10439 enterobactin/ferric e 99.1 9.4E-09 2E-13 110.5 22.8 219 464-722 179-408 (411)
116 PLN03084 alpha/beta hydrolase 99.1 1.4E-08 3E-13 108.4 22.1 122 472-608 111-232 (383)
117 PRK08775 homoserine O-acetyltr 99.1 3.4E-09 7.4E-14 112.8 17.3 86 511-608 84-173 (343)
118 cd00312 Esterase_lipase Estera 99.0 6.9E-10 1.5E-14 124.4 10.5 133 472-610 75-215 (493)
119 PF03583 LIP: Secretory lipase 99.0 1.1E-08 2.4E-13 105.1 17.3 196 514-724 17-282 (290)
120 PF00930 DPPIV_N: Dipeptidyl p 99.0 6.5E-08 1.4E-12 103.2 23.8 204 125-338 104-351 (353)
121 PF12740 Chlorophyllase2: Chlo 99.0 3.3E-09 7.2E-14 104.2 12.2 178 479-702 5-205 (259)
122 KOG4627 Kynurenine formamidase 99.0 2.4E-09 5.2E-14 98.0 9.5 222 464-723 44-267 (270)
123 PF14583 Pectate_lyase22: Olig 99.0 8.5E-07 1.8E-11 91.6 28.2 209 125-349 39-274 (386)
124 PLN02980 2-oxoglutarate decarb 98.9 3.8E-08 8.3E-13 123.4 21.6 124 478-607 1356-1479(1655)
125 PRK05855 short chain dehydroge 98.9 2.4E-08 5.2E-13 114.7 18.3 107 471-593 8-114 (582)
126 COG2272 PnbA Carboxylesterase 98.9 1.9E-09 4.2E-14 113.0 8.0 132 471-609 75-218 (491)
127 KOG3043 Predicted hydrolase re 98.9 4.8E-08 1E-12 91.5 15.9 183 496-724 41-241 (242)
128 COG0627 Predicted esterase [Ge 98.9 4.2E-08 9.2E-13 100.6 14.9 221 491-725 51-313 (316)
129 PF05728 UPF0227: Uncharacteri 98.8 1.7E-07 3.6E-12 89.1 16.2 182 496-720 1-186 (187)
130 TIGR01838 PHA_synth_I poly(R)- 98.8 2.3E-07 5E-12 102.1 18.2 109 495-611 189-305 (532)
131 KOG1454 Predicted hydrolase/ac 98.8 1.8E-07 4E-12 97.6 16.2 214 492-723 56-324 (326)
132 COG4946 Uncharacterized protei 98.7 2.3E-06 4.9E-11 87.8 21.4 249 127-414 42-303 (668)
133 PF00135 COesterase: Carboxyle 98.7 2.6E-08 5.6E-13 113.2 8.6 133 472-607 105-244 (535)
134 PF08538 DUF1749: Protein of u 98.7 1.5E-07 3.3E-12 94.3 12.0 217 494-720 33-302 (303)
135 PRK06765 homoserine O-acetyltr 98.7 1.2E-06 2.5E-11 93.9 19.4 113 492-606 54-194 (389)
136 COG4757 Predicted alpha/beta h 98.7 5.3E-07 1.1E-11 84.8 13.9 238 468-720 8-280 (281)
137 PF08662 eIF2A: Eukaryotic tra 98.7 2.3E-06 4.9E-11 82.6 19.0 144 126-281 10-164 (194)
138 PF06342 DUF1057: Alpha/beta h 98.6 1.6E-06 3.5E-11 85.0 17.2 205 465-683 6-240 (297)
139 KOG3847 Phospholipase A2 (plat 98.6 1.4E-06 3.1E-11 85.4 16.0 111 491-604 115-271 (399)
140 COG4188 Predicted dienelactone 98.6 2.4E-07 5.2E-12 94.5 10.7 130 465-596 38-182 (365)
141 PF00561 Abhydrolase_1: alpha/ 98.6 5.2E-08 1.1E-12 97.0 5.8 78 524-607 1-78 (230)
142 PRK07868 acyl-CoA synthetase; 98.6 1.4E-06 3.1E-11 105.6 18.9 104 493-610 66-179 (994)
143 PF03403 PAF-AH_p_II: Platelet 98.6 1.1E-07 2.5E-12 101.0 7.5 112 492-606 98-260 (379)
144 PF07224 Chlorophyllase: Chlor 98.6 5.9E-07 1.3E-11 86.2 11.2 134 460-609 11-158 (307)
145 cd00707 Pancreat_lipase_like P 98.5 2.5E-07 5.4E-12 94.6 9.0 112 492-608 34-147 (275)
146 COG2382 Fes Enterochelin ester 98.5 9.1E-07 2E-11 87.7 12.0 202 466-704 70-282 (299)
147 PF02897 Peptidase_S9_N: Proly 98.5 0.00028 6.1E-09 77.3 32.8 253 54-350 131-407 (414)
148 TIGR03866 PQQ_ABC_repeats PQQ- 98.5 0.00023 5E-09 73.7 29.3 142 125-280 34-176 (300)
149 PF14583 Pectate_lyase22: Olig 98.5 0.00032 6.9E-09 72.9 29.0 158 128-299 87-272 (386)
150 PRK13616 lipoprotein LpqB; Pro 98.4 1.6E-05 3.4E-10 89.4 21.1 159 123-299 351-527 (591)
151 PF10340 DUF2424: Protein of u 98.4 8.8E-06 1.9E-10 84.5 17.5 120 480-611 108-238 (374)
152 KOG2564 Predicted acetyltransf 98.4 1.3E-06 2.8E-11 84.5 10.0 117 464-593 49-166 (343)
153 COG2819 Predicted hydrolase of 98.4 4.9E-05 1.1E-09 74.6 20.1 144 464-610 8-174 (264)
154 PF09752 DUF2048: Uncharacteri 98.4 1.8E-05 3.8E-10 80.9 17.3 123 479-605 78-207 (348)
155 TIGR03230 lipo_lipase lipoprot 98.4 3E-06 6.5E-11 90.8 12.3 111 493-607 40-153 (442)
156 TIGR03502 lipase_Pla1_cef extr 98.4 3.9E-06 8.5E-11 95.5 13.4 100 492-593 447-575 (792)
157 TIGR01839 PHA_synth_II poly(R) 98.4 1.9E-05 4.2E-10 86.2 18.1 86 513-611 237-331 (560)
158 PRK13616 lipoprotein LpqB; Pro 98.3 5.4E-05 1.2E-09 85.1 21.6 116 124-250 399-529 (591)
159 KOG4409 Predicted hydrolase/ac 98.3 4.5E-06 9.9E-11 84.1 11.4 103 495-607 91-194 (365)
160 PF06821 Ser_hydrolase: Serine 98.3 1.6E-05 3.5E-10 74.7 14.4 161 497-712 1-164 (171)
161 PF08662 eIF2A: Eukaryotic tra 98.3 1.5E-05 3.3E-10 76.9 14.3 103 123-235 61-163 (194)
162 KOG1553 Predicted alpha/beta h 98.3 7.1E-06 1.5E-10 81.4 11.6 136 464-612 213-349 (517)
163 TIGR02658 TTQ_MADH_Hv methylam 98.3 0.00093 2E-08 69.8 27.8 244 128-410 52-334 (352)
164 TIGR03866 PQQ_ABC_repeats PQQ- 98.3 0.0003 6.4E-09 72.9 24.5 194 126-349 77-281 (300)
165 KOG2112 Lysophospholipase [Lip 98.3 3.2E-05 6.8E-10 72.6 14.9 185 495-722 4-203 (206)
166 KOG0293 WD40 repeat-containing 98.2 0.0001 2.2E-09 74.9 19.0 145 124-281 227-375 (519)
167 KOG2984 Predicted hydrolase [G 98.2 2.3E-06 5E-11 78.6 6.6 211 496-722 44-275 (277)
168 COG4946 Uncharacterized protei 98.2 6.8E-05 1.5E-09 77.3 16.1 141 129-282 367-510 (668)
169 COG3571 Predicted hydrolase of 98.1 0.00029 6.4E-09 62.6 17.0 144 495-674 15-161 (213)
170 PF10282 Lactonase: Lactonase, 98.1 0.0024 5.3E-08 67.9 27.7 261 125-415 40-333 (345)
171 PF12146 Hydrolase_4: Putative 98.1 1.6E-05 3.5E-10 64.0 8.3 78 475-565 1-78 (79)
172 PF05677 DUF818: Chlamydia CHL 98.1 2.4E-05 5.2E-10 78.8 11.2 123 460-594 107-236 (365)
173 KOG2624 Triglyceride lipase-ch 98.1 1.8E-05 4E-10 83.6 10.7 144 460-610 43-201 (403)
174 KOG2314 Translation initiation 98.0 0.0008 1.7E-08 71.1 21.4 204 124-347 308-525 (698)
175 COG2021 MET2 Homoserine acetyl 98.0 0.00012 2.6E-09 74.9 15.1 113 492-606 49-180 (368)
176 PRK10115 protease 2; Provision 98.0 0.0023 5E-08 74.1 27.7 247 54-348 134-395 (686)
177 COG1073 Hydrolases of the alph 98.0 8.2E-05 1.8E-09 77.1 14.6 236 476-724 31-298 (299)
178 PF02273 Acyl_transf_2: Acyl t 98.0 0.00026 5.5E-09 67.8 16.0 215 470-703 7-238 (294)
179 PRK11028 6-phosphogluconolacto 98.0 0.0032 6.9E-08 66.6 26.9 144 126-280 39-194 (330)
180 PF03959 FSH1: Serine hydrolas 98.0 6.7E-05 1.4E-09 73.7 12.9 166 493-705 3-204 (212)
181 PRK11028 6-phosphogluconolacto 98.0 0.0013 2.9E-08 69.5 23.5 198 126-346 84-305 (330)
182 COG3208 GrsT Predicted thioest 98.0 9.9E-05 2.1E-09 71.2 12.4 183 495-705 9-219 (244)
183 COG2706 3-carboxymuconate cycl 98.0 0.019 4.1E-07 58.2 28.8 262 125-415 43-332 (346)
184 KOG2382 Predicted alpha/beta h 98.0 0.00016 3.5E-09 72.9 14.3 101 492-603 50-154 (315)
185 PF10282 Lactonase: Lactonase, 98.0 0.0026 5.7E-08 67.6 24.7 199 127-348 92-325 (345)
186 PF02239 Cytochrom_D1: Cytochr 98.0 0.02 4.3E-07 61.2 31.2 155 126-299 41-202 (369)
187 KOG0318 WD40 repeat stress pro 97.9 0.0012 2.6E-08 69.3 20.4 193 123-347 192-392 (603)
188 TIGR02658 TTQ_MADH_Hv methylam 97.9 0.0091 2E-07 62.5 27.2 116 132-250 11-138 (352)
189 TIGR01849 PHB_depoly_PhaZ poly 97.9 0.00058 1.3E-08 72.6 17.9 87 513-611 120-211 (406)
190 KOG4497 Uncharacterized conser 97.9 0.00018 4E-09 71.0 12.9 140 127-282 14-155 (447)
191 KOG2139 WD40 repeat protein [G 97.9 0.0014 2.9E-08 65.9 19.1 104 121-236 195-301 (445)
192 KOG2055 WD40 repeat protein [G 97.9 0.00033 7.1E-09 72.3 14.9 201 123-344 305-511 (514)
193 KOG0293 WD40 repeat-containing 97.8 0.00033 7.1E-09 71.2 13.9 112 123-249 271-385 (519)
194 KOG0318 WD40 repeat stress pro 97.8 0.015 3.3E-07 61.4 26.0 148 123-280 61-255 (603)
195 KOG1516 Carboxylesterase and r 97.8 3.7E-05 8E-10 87.4 7.7 132 471-608 92-232 (545)
196 PF02239 Cytochrom_D1: Cytochr 97.8 0.018 3.9E-07 61.5 27.5 255 125-411 81-352 (369)
197 KOG0315 G-protein beta subunit 97.8 0.0017 3.8E-08 62.0 17.1 147 123-280 42-235 (311)
198 KOG0279 G protein beta subunit 97.8 0.0097 2.1E-07 58.0 22.4 195 123-349 65-264 (315)
199 PTZ00420 coronin; Provisional 97.8 0.0027 5.8E-08 71.0 21.6 148 123-280 127-282 (568)
200 PRK04940 hypothetical protein; 97.8 0.00077 1.7E-08 62.8 14.6 119 573-721 60-178 (180)
201 KOG2551 Phospholipase/carboxyh 97.8 0.0013 2.9E-08 62.3 16.0 174 493-712 4-212 (230)
202 cd00200 WD40 WD40 domain, foun 97.8 0.033 7.1E-07 56.2 27.9 112 123-249 11-124 (289)
203 COG0596 MhpC Predicted hydrola 97.7 0.00025 5.4E-09 71.2 11.0 101 494-608 21-123 (282)
204 PF06433 Me-amine-dh_H: Methyl 97.7 0.037 8E-07 56.8 25.9 241 124-411 38-325 (342)
205 KOG2096 WD40 repeat protein [G 97.7 0.011 2.4E-07 58.6 20.7 215 109-347 77-310 (420)
206 PTZ00421 coronin; Provisional 97.7 0.018 3.8E-07 63.9 25.4 114 123-250 77-200 (493)
207 PF08450 SGL: SMP-30/Gluconola 97.7 0.066 1.4E-06 53.9 27.8 195 126-347 4-213 (246)
208 PF05577 Peptidase_S28: Serine 97.6 0.00022 4.7E-09 78.6 10.1 114 494-610 29-150 (434)
209 PTZ00420 coronin; Provisional 97.6 0.034 7.4E-07 62.3 26.9 113 123-250 76-199 (568)
210 PTZ00421 coronin; Provisional 97.6 0.0089 1.9E-07 66.3 21.5 147 123-279 127-278 (493)
211 COG3545 Predicted esterase of 97.5 0.0053 1.1E-07 56.2 15.7 110 548-684 37-146 (181)
212 KOG0271 Notchless-like WD40 re 97.5 0.0004 8.7E-09 70.0 9.2 94 123-231 369-467 (480)
213 KOG0272 U4/U6 small nuclear ri 97.5 0.0026 5.7E-08 65.1 14.5 111 122-245 262-374 (459)
214 PF11339 DUF3141: Protein of u 97.5 0.0051 1.1E-07 65.6 16.6 103 492-611 67-179 (581)
215 KOG0271 Notchless-like WD40 re 97.4 0.0037 8E-08 63.3 14.5 71 124-204 118-190 (480)
216 KOG0266 WD40 repeat-containing 97.4 0.018 4E-07 63.6 21.7 145 121-280 203-354 (456)
217 KOG0291 WD40-repeat-containing 97.4 0.014 2.9E-07 64.4 19.5 196 121-346 350-549 (893)
218 KOG1407 WD40 repeat protein [F 97.4 0.018 3.9E-07 55.7 17.6 148 123-278 66-249 (313)
219 PF10230 DUF2305: Uncharacteri 97.3 0.0017 3.6E-08 66.1 11.4 111 494-608 2-122 (266)
220 COG2706 3-carboxymuconate cycl 97.3 0.26 5.7E-06 50.2 28.2 246 149-417 17-287 (346)
221 KOG2055 WD40 repeat protein [G 97.2 0.017 3.8E-07 60.0 17.0 142 123-281 259-408 (514)
222 KOG0291 WD40-repeat-containing 97.2 0.2 4.2E-06 55.7 25.5 238 123-408 309-552 (893)
223 cd00200 WD40 WD40 domain, foun 97.2 0.076 1.6E-06 53.5 22.3 112 123-249 95-208 (289)
224 COG3386 Gluconolactonase [Carb 97.2 0.16 3.5E-06 52.5 23.8 249 126-410 29-292 (307)
225 KOG1407 WD40 repeat protein [F 97.2 0.034 7.4E-07 53.8 17.1 149 123-297 22-177 (313)
226 KOG1446 Histone H3 (Lys4) meth 97.1 0.04 8.7E-07 54.8 17.6 130 105-250 123-264 (311)
227 PF10142 PhoPQ_related: PhoPQ- 97.1 0.037 8E-07 58.2 18.5 230 480-723 52-320 (367)
228 PF11144 DUF2920: Protein of u 97.1 0.017 3.6E-07 60.7 15.5 207 476-687 20-325 (403)
229 PF06028 DUF915: Alpha/beta hy 97.1 0.01 2.2E-07 59.4 13.6 196 494-705 12-239 (255)
230 KOG0645 WD40 repeat protein [G 97.1 0.15 3.3E-06 49.7 20.6 72 122-203 62-137 (312)
231 PF10647 Gmad1: Lipoprotein Lp 97.1 0.088 1.9E-06 53.1 20.5 119 123-248 25-144 (253)
232 PF06057 VirJ: Bacterial virul 97.1 0.0071 1.5E-07 56.7 11.4 82 514-606 20-105 (192)
233 KOG0645 WD40 repeat protein [G 97.0 0.33 7.1E-06 47.5 22.2 194 123-343 16-223 (312)
234 KOG1273 WD40 repeat protein [G 97.0 0.072 1.6E-06 53.0 18.0 108 126-249 28-138 (405)
235 PF08450 SGL: SMP-30/Gluconola 97.0 0.06 1.3E-06 54.2 18.2 149 121-280 85-245 (246)
236 PF00151 Lipase: Lipase; Inte 96.9 0.0011 2.4E-08 69.3 5.4 112 491-606 68-185 (331)
237 PF07819 PGAP1: PGAP1-like pro 96.9 0.0069 1.5E-07 59.9 10.7 101 495-604 5-119 (225)
238 COG3150 Predicted esterase [Ge 96.9 0.022 4.8E-07 51.5 12.6 52 552-608 40-91 (191)
239 KOG2237 Predicted serine prote 96.9 0.035 7.6E-07 60.7 16.5 83 103-187 107-190 (712)
240 COG3243 PhaC Poly(3-hydroxyalk 96.9 0.012 2.6E-07 61.4 12.4 86 513-611 129-220 (445)
241 PLN02733 phosphatidylcholine-s 96.9 0.0022 4.9E-08 69.4 7.3 90 510-608 108-201 (440)
242 KOG4389 Acetylcholinesterase/B 96.9 0.0016 3.5E-08 68.4 5.8 112 496-609 137-256 (601)
243 PF06433 Me-amine-dh_H: Methyl 96.9 0.51 1.1E-05 48.6 23.5 163 124-299 97-277 (342)
244 TIGR02171 Fb_sc_TIGR02171 Fibr 96.9 0.0094 2E-07 68.2 12.1 120 133-260 318-453 (912)
245 KOG1274 WD40 repeat protein [G 96.9 0.023 5E-07 64.0 14.9 114 123-249 140-263 (933)
246 PTZ00472 serine carboxypeptida 96.8 0.0094 2E-07 65.6 12.0 132 475-611 60-219 (462)
247 KOG1446 Histone H3 (Lys4) meth 96.8 0.64 1.4E-05 46.5 26.1 248 123-412 16-268 (311)
248 PF07676 PD40: WD40-like Beta 96.8 0.0017 3.6E-08 44.3 3.8 28 125-152 12-39 (39)
249 KOG0973 Histone transcription 96.8 0.027 5.8E-07 64.6 15.2 141 123-279 71-238 (942)
250 KOG2314 Translation initiation 96.8 0.33 7.2E-06 52.1 21.8 254 124-407 252-526 (698)
251 KOG0272 U4/U6 small nuclear ri 96.7 0.028 6.1E-07 57.9 13.4 191 122-343 218-416 (459)
252 KOG0279 G protein beta subunit 96.7 0.054 1.2E-06 53.0 14.0 99 123-232 194-300 (315)
253 KOG0973 Histone transcription 96.7 0.035 7.6E-07 63.7 14.9 115 123-247 131-252 (942)
254 KOG4840 Predicted hydrolases o 96.7 0.011 2.3E-07 55.9 8.9 105 496-611 38-147 (299)
255 KOG0266 WD40 repeat-containing 96.6 0.38 8.3E-06 53.2 22.7 140 123-278 161-306 (456)
256 COG4947 Uncharacterized protei 96.6 0.0015 3.2E-08 58.8 2.9 53 559-613 89-141 (227)
257 KOG0263 Transcription initiati 96.6 0.018 3.8E-07 63.8 11.6 112 123-249 537-650 (707)
258 PF03096 Ndr: Ndr family; Int 96.6 0.074 1.6E-06 53.4 14.8 233 470-724 4-279 (283)
259 KOG1063 RNA polymerase II elon 96.6 0.017 3.7E-07 63.0 10.9 118 122-245 526-647 (764)
260 KOG3967 Uncharacterized conser 96.5 0.033 7.1E-07 52.3 11.1 108 481-596 89-213 (297)
261 PLN00181 protein SPA1-RELATED; 96.5 0.79 1.7E-05 54.8 26.0 195 123-347 485-690 (793)
262 COG5354 Uncharacterized protei 96.5 0.22 4.9E-06 52.8 18.2 141 127-280 137-294 (561)
263 COG1770 PtrB Protease II [Amin 96.5 2.1 4.5E-05 47.8 28.3 221 169-415 131-357 (682)
264 KOG0305 Anaphase promoting com 96.4 0.37 8.1E-06 52.3 20.2 139 123-278 219-361 (484)
265 KOG3253 Predicted alpha/beta h 96.4 0.059 1.3E-06 58.4 13.7 167 493-704 175-347 (784)
266 KOG1445 Tumor-specific antigen 96.4 0.024 5.2E-07 61.1 10.7 116 123-249 679-799 (1012)
267 PF07433 DUF1513: Protein of u 96.4 0.62 1.3E-05 47.4 20.1 59 126-184 55-116 (305)
268 KOG2183 Prolylcarboxypeptidase 96.4 0.012 2.7E-07 60.8 8.1 88 521-608 109-203 (492)
269 PF05990 DUF900: Alpha/beta hy 96.3 0.022 4.8E-07 56.6 9.8 112 493-610 17-139 (233)
270 PF00450 Peptidase_S10: Serine 96.3 0.038 8.2E-07 60.5 12.5 140 469-611 17-184 (415)
271 KOG2565 Predicted hydrolases o 96.3 0.019 4.1E-07 58.5 8.9 119 473-602 131-258 (469)
272 KOG2315 Predicted translation 96.3 0.21 4.6E-06 53.6 16.7 156 127-297 223-390 (566)
273 KOG0275 Conserved WD40 repeat- 96.3 0.032 7E-07 55.3 9.9 106 125-243 267-375 (508)
274 KOG2096 WD40 repeat protein [G 96.2 0.041 8.9E-07 54.7 10.6 112 127-250 234-362 (420)
275 KOG4378 Nuclear protein COP1 [ 96.2 0.11 2.4E-06 54.7 14.0 123 124-261 167-293 (673)
276 KOG2048 WD40 repeat protein [G 96.2 0.14 3.1E-06 56.0 15.2 117 123-250 384-507 (691)
277 PF00975 Thioesterase: Thioest 96.1 0.028 6E-07 55.8 9.5 97 496-605 2-101 (229)
278 KOG2394 WD40 protein DMR-N9 [G 96.1 0.0052 1.1E-07 64.9 4.2 57 123-184 292-350 (636)
279 KOG4388 Hormone-sensitive lipa 96.1 0.011 2.4E-07 63.3 6.4 86 494-591 396-487 (880)
280 PF10647 Gmad1: Lipoprotein Lp 96.1 1.1 2.5E-05 45.1 20.7 120 123-249 67-198 (253)
281 KOG2182 Hydrolytic enzymes of 96.1 0.043 9.3E-07 58.5 10.5 115 493-610 85-209 (514)
282 PLN00181 protein SPA1-RELATED; 96.0 2.3 5E-05 50.8 26.7 111 124-250 535-650 (793)
283 PF01674 Lipase_2: Lipase (cla 96.0 0.0089 1.9E-07 58.3 5.0 89 497-593 4-95 (219)
284 KOG0315 G-protein beta subunit 96.0 1.2 2.6E-05 43.3 18.8 176 147-348 19-198 (311)
285 KOG0772 Uncharacterized conser 95.9 0.22 4.7E-06 52.9 14.7 149 121-281 268-430 (641)
286 PF07082 DUF1350: Protein of u 95.9 0.059 1.3E-06 52.7 10.1 174 481-685 9-190 (250)
287 KOG1274 WD40 repeat protein [G 95.9 0.4 8.7E-06 54.5 17.5 156 103-279 86-251 (933)
288 KOG1273 WD40 repeat protein [G 95.9 0.63 1.4E-05 46.5 16.9 114 123-249 67-184 (405)
289 PF05705 DUF829: Eukaryotic pr 95.8 0.4 8.6E-06 48.0 16.0 46 654-704 177-224 (240)
290 PF07676 PD40: WD40-like Beta 95.8 0.021 4.5E-07 38.8 4.6 31 167-197 9-39 (39)
291 PF12048 DUF3530: Protein of u 95.8 1.9 4.1E-05 44.9 21.2 135 466-607 63-228 (310)
292 KOG0289 mRNA splicing factor [ 95.7 1.2 2.6E-05 46.6 18.7 159 124-311 306-470 (506)
293 KOG0639 Transducin-like enhanc 95.7 0.17 3.6E-06 53.5 12.8 108 127-250 515-624 (705)
294 COG3391 Uncharacterized conser 95.6 2.6 5.7E-05 45.4 22.6 156 125-299 77-239 (381)
295 PRK02888 nitrous-oxide reducta 95.6 0.16 3.5E-06 56.5 13.1 135 129-279 200-339 (635)
296 PF07433 DUF1513: Protein of u 95.6 0.12 2.7E-06 52.4 11.2 102 127-234 10-117 (305)
297 KOG0277 Peroxisomal targeting 95.4 0.84 1.8E-05 44.4 15.4 198 126-347 13-221 (311)
298 KOG0290 Conserved WD40 repeat- 95.4 1.1 2.4E-05 44.4 16.3 207 105-333 137-355 (364)
299 KOG0650 WD40 repeat nucleolar 95.4 0.23 4.9E-06 53.7 12.6 115 123-249 402-555 (733)
300 COG3386 Gluconolactonase [Carb 95.3 0.41 9E-06 49.5 14.4 75 123-201 112-193 (307)
301 KOG1539 WD repeat protein [Gen 95.3 0.083 1.8E-06 59.1 9.5 81 146-235 554-637 (910)
302 KOG0296 Angio-associated migra 95.3 3.1 6.6E-05 42.7 19.6 142 123-280 66-210 (399)
303 PLN02919 haloacid dehalogenase 95.3 5 0.00011 49.2 25.6 114 125-250 627-772 (1057)
304 KOG2110 Uncharacterized conser 95.2 0.22 4.8E-06 50.7 11.5 114 123-247 131-249 (391)
305 PF06977 SdiA-regulated: SdiA- 95.2 3.8 8.3E-05 40.9 22.9 173 105-299 8-201 (248)
306 KOG0771 Prolactin regulatory e 95.1 0.85 1.8E-05 47.4 15.4 145 125-281 148-302 (398)
307 KOG4497 Uncharacterized conser 95.0 0.2 4.3E-06 50.2 10.2 103 124-237 51-155 (447)
308 KOG2931 Differentiation-relate 94.9 0.6 1.3E-05 46.7 13.3 132 465-608 22-157 (326)
309 KOG0296 Angio-associated migra 94.9 0.85 1.8E-05 46.6 14.4 113 123-250 108-222 (399)
310 KOG0306 WD40-repeat-containing 94.9 1.4 3E-05 49.3 17.1 191 128-345 419-620 (888)
311 KOG0305 Anaphase promoting com 94.9 0.71 1.5E-05 50.2 15.0 146 123-280 303-451 (484)
312 KOG2048 WD40 repeat protein [G 94.9 8.1 0.00018 42.9 22.6 168 214-412 381-554 (691)
313 COG3319 Thioesterase domains o 94.7 0.12 2.6E-06 51.7 8.2 85 495-593 1-85 (257)
314 KOG0263 Transcription initiati 94.7 1.8 3.9E-05 48.6 17.7 137 124-276 454-593 (707)
315 KOG0268 Sof1-like rRNA process 94.7 0.19 4.1E-06 51.1 9.1 116 121-249 187-303 (433)
316 KOG0278 Serine/threonine kinas 94.6 1.8 3.9E-05 42.0 15.0 189 124-346 103-298 (334)
317 KOG0771 Prolactin regulatory e 94.6 0.87 1.9E-05 47.3 13.9 115 123-249 188-312 (398)
318 KOG2139 WD40 repeat protein [G 94.4 0.9 1.9E-05 46.4 13.3 153 123-299 142-311 (445)
319 KOG0273 Beta-transducin family 94.4 2.3 5E-05 45.0 16.6 112 123-249 361-483 (524)
320 KOG0278 Serine/threonine kinas 94.4 0.7 1.5E-05 44.7 11.8 113 124-249 187-300 (334)
321 KOG0286 G-protein beta subunit 94.4 6.2 0.00013 39.4 20.7 194 123-347 57-259 (343)
322 PLN03016 sinapoylglucose-malat 94.4 0.42 9.1E-06 52.1 12.0 133 474-611 48-213 (433)
323 COG4814 Uncharacterized protei 94.3 1.6 3.4E-05 42.8 14.1 179 493-685 45-252 (288)
324 KOG1539 WD repeat protein [Gen 94.1 0.17 3.8E-06 56.7 8.3 60 123-187 578-638 (910)
325 KOG2106 Uncharacterized conser 93.9 0.67 1.4E-05 49.2 11.7 95 127-232 413-508 (626)
326 KOG2315 Predicted translation 93.9 8.8 0.00019 41.7 20.0 200 126-348 130-345 (566)
327 KOG0643 Translation initiation 93.9 6 0.00013 39.0 17.2 119 123-250 54-179 (327)
328 KOG0288 WD40 repeat protein Ti 93.9 0.32 6.9E-06 50.3 9.1 100 123-232 343-448 (459)
329 KOG0289 mRNA splicing factor [ 93.8 2.9 6.3E-05 43.8 15.8 119 124-258 350-470 (506)
330 PLN02209 serine carboxypeptida 93.8 0.69 1.5E-05 50.5 12.3 140 468-611 44-215 (437)
331 PF07519 Tannase: Tannase and 93.8 0.32 6.9E-06 53.8 9.7 131 477-612 16-154 (474)
332 KOG0772 Uncharacterized conser 93.7 12 0.00026 40.3 24.6 150 113-277 160-334 (641)
333 KOG0643 Translation initiation 93.7 2.1 4.6E-05 42.0 13.7 118 123-249 95-221 (327)
334 KOG2110 Uncharacterized conser 93.7 0.29 6.3E-06 49.9 8.3 77 103-185 152-237 (391)
335 PF11187 DUF2974: Protein of u 93.6 0.096 2.1E-06 51.5 4.8 46 558-603 69-118 (224)
336 KOG0303 Actin-binding protein 93.4 2.3 5E-05 44.0 14.2 146 123-281 133-284 (472)
337 COG1506 DAP2 Dipeptidyl aminop 93.4 12 0.00026 43.3 22.1 207 123-346 102-343 (620)
338 KOG1538 Uncharacterized conser 93.3 0.79 1.7E-05 50.3 11.3 58 121-184 12-71 (1081)
339 KOG0282 mRNA splicing factor [ 93.3 2.3 4.9E-05 45.2 14.1 73 123-204 260-333 (503)
340 KOG0286 G-protein beta subunit 93.2 3.9 8.4E-05 40.8 14.9 111 123-247 188-302 (343)
341 KOG3975 Uncharacterized conser 93.2 2.3 4.9E-05 41.6 13.0 102 490-593 25-130 (301)
342 KOG0283 WD40 repeat-containing 93.1 1.3 2.8E-05 50.0 13.0 101 123-237 371-473 (712)
343 KOG0640 mRNA cleavage stimulat 93.1 5.1 0.00011 40.2 15.5 114 123-249 218-336 (430)
344 COG4782 Uncharacterized protei 93.1 0.47 1E-05 48.9 8.9 110 495-611 117-237 (377)
345 KOG0302 Ribosome Assembly prot 93.1 8.4 0.00018 39.8 17.4 113 126-249 216-333 (440)
346 COG5354 Uncharacterized protei 93.0 2.2 4.7E-05 45.7 13.6 148 121-280 220-379 (561)
347 PRK10252 entF enterobactin syn 92.9 0.5 1.1E-05 60.0 11.1 98 495-606 1069-1169(1296)
348 PF05057 DUF676: Putative seri 92.8 0.24 5.1E-06 48.8 6.3 20 573-592 78-97 (217)
349 KOG0273 Beta-transducin family 92.6 15 0.00033 39.1 18.9 113 123-249 237-350 (524)
350 KOG1282 Serine carboxypeptidas 92.4 1.5 3.2E-05 47.7 12.1 140 469-611 50-216 (454)
351 KOG1445 Tumor-specific antigen 92.3 0.67 1.5E-05 50.5 9.1 62 123-189 722-787 (1012)
352 KOG1408 WD40 repeat protein [F 92.3 1.1 2.3E-05 49.7 10.7 114 123-249 80-197 (1080)
353 PLN02919 haloacid dehalogenase 92.0 11 0.00023 46.5 20.2 113 126-249 687-834 (1057)
354 KOG0275 Conserved WD40 repeat- 91.9 1.6 3.4E-05 43.7 10.4 61 123-188 308-370 (508)
355 PF04762 IKI3: IKI3 family; I 91.6 33 0.00071 41.6 23.2 148 123-280 77-276 (928)
356 TIGR02171 Fb_sc_TIGR02171 Fibr 91.6 1.4 3.1E-05 51.0 11.3 98 179-282 319-421 (912)
357 KOG0646 WD40 repeat protein [G 91.5 22 0.00047 37.9 18.6 56 124-184 84-141 (476)
358 PF02450 LCAT: Lecithin:choles 91.5 0.28 6.1E-06 52.9 5.4 88 511-607 66-159 (389)
359 PF08386 Abhydrolase_4: TAP-li 91.3 0.57 1.2E-05 39.8 6.1 43 655-704 34-76 (103)
360 KOG0283 WD40 repeat-containing 91.2 1.7 3.8E-05 49.0 11.1 113 123-249 453-577 (712)
361 KOG0299 U3 snoRNP-associated p 91.1 24 0.00051 37.6 19.2 60 123-187 204-265 (479)
362 COG3490 Uncharacterized protei 91.1 6.1 0.00013 39.4 13.4 108 166-281 67-181 (366)
363 KOG2919 Guanine nucleotide-bin 91.0 13 0.00028 37.7 15.7 112 124-250 52-189 (406)
364 KOG2394 WD40 protein DMR-N9 [G 90.8 1.7 3.8E-05 46.6 10.1 55 168-232 292-349 (636)
365 KOG1009 Chromatin assembly com 90.8 1.5 3.3E-05 45.5 9.4 103 121-235 65-185 (434)
366 KOG0313 Microtubule binding pr 90.5 5.2 0.00011 41.3 12.7 115 122-249 261-377 (423)
367 PF01764 Lipase_3: Lipase (cla 90.4 0.54 1.2E-05 42.4 5.5 38 554-593 47-84 (140)
368 PRK02888 nitrous-oxide reducta 90.3 6.2 0.00013 44.4 14.3 110 126-249 239-352 (635)
369 PF13360 PQQ_2: PQQ-like domai 90.0 15 0.00032 36.2 16.2 188 129-349 32-232 (238)
370 COG1075 LipA Predicted acetylt 90.0 1.2 2.6E-05 47.0 8.4 98 496-607 61-163 (336)
371 KOG0288 WD40 repeat protein Ti 89.7 5.8 0.00013 41.4 12.4 93 149-250 323-419 (459)
372 KOG0640 mRNA cleavage stimulat 89.6 19 0.0004 36.4 15.4 108 127-249 118-247 (430)
373 PRK13614 lipoprotein LpqB; Pro 89.6 32 0.00069 39.0 19.4 161 123-298 344-517 (573)
374 KOG0269 WD40 repeat-containing 89.6 5.1 0.00011 45.2 12.8 129 123-262 178-310 (839)
375 KOG0303 Actin-binding protein 89.5 30 0.00064 36.3 19.0 113 123-249 83-204 (472)
376 PF03088 Str_synth: Strictosid 89.4 4.4 9.5E-05 33.3 9.4 73 171-248 2-87 (89)
377 PRK13613 lipoprotein LpqB; Pro 89.4 18 0.0004 41.2 17.5 165 123-299 364-539 (599)
378 KOG0265 U5 snRNP-specific prot 89.2 5.6 0.00012 39.8 11.5 113 123-249 49-164 (338)
379 KOG0282 mRNA splicing factor [ 89.0 6.3 0.00014 42.0 12.4 115 122-250 215-332 (503)
380 KOG1009 Chromatin assembly com 88.9 0.71 1.5E-05 47.7 5.4 104 124-232 126-247 (434)
381 KOG0647 mRNA export protein (c 88.8 28 0.00061 35.1 18.4 74 123-205 29-106 (347)
382 cd00741 Lipase Lipase. Lipase 88.6 0.59 1.3E-05 43.0 4.4 26 571-596 26-51 (153)
383 KOG2541 Palmitoyl protein thio 88.4 6.3 0.00014 39.1 11.2 90 494-595 24-114 (296)
384 KOG0319 WD40-repeat-containing 88.1 24 0.00053 39.8 16.6 195 121-345 192-395 (775)
385 COG3391 Uncharacterized conser 87.9 43 0.00093 36.0 27.8 248 127-412 36-289 (381)
386 KOG0295 WD40 repeat-containing 87.8 26 0.00057 36.2 15.4 110 126-249 240-365 (406)
387 KOG4499 Ca2+-binding protein R 87.7 7.7 0.00017 37.6 11.0 83 124-211 111-202 (310)
388 PF04083 Abhydro_lipase: Parti 87.6 1.9 4.1E-05 32.8 5.7 48 460-507 7-56 (63)
389 COG3490 Uncharacterized protei 87.4 5.1 0.00011 40.0 9.9 102 127-234 73-180 (366)
390 KOG4283 Transcription-coupled 87.3 6.3 0.00014 39.3 10.5 132 107-251 127-279 (397)
391 PF04762 IKI3: IKI3 family; I 87.3 8.8 0.00019 46.3 14.0 107 126-235 214-324 (928)
392 KOG0306 WD40-repeat-containing 87.0 62 0.0013 36.9 21.9 144 123-283 456-614 (888)
393 KOG0270 WD40 repeat-containing 86.9 46 0.001 35.4 17.1 155 171-347 248-406 (463)
394 KOG1523 Actin-related protein 86.4 5.6 0.00012 40.2 9.7 119 124-250 103-238 (361)
395 PF05694 SBP56: 56kDa selenium 85.8 14 0.00031 39.5 12.9 127 147-280 221-393 (461)
396 KOG1007 WD repeat protein TSSC 85.6 5.9 0.00013 39.4 9.3 113 123-250 125-247 (370)
397 KOG0284 Polyadenylation factor 85.5 11 0.00023 39.5 11.5 195 123-345 140-337 (464)
398 KOG0264 Nucleosome remodeling 84.9 18 0.00039 38.3 13.0 116 123-249 229-348 (422)
399 PF03283 PAE: Pectinacetyleste 84.9 1.5 3.2E-05 46.6 5.4 40 553-592 136-175 (361)
400 PF11288 DUF3089: Protein of u 84.2 1.1 2.4E-05 43.1 3.6 86 522-608 44-137 (207)
401 PF11768 DUF3312: Protein of u 84.2 17 0.00036 40.1 12.9 79 125-213 263-342 (545)
402 cd00519 Lipase_3 Lipase (class 83.9 1.7 3.8E-05 43.0 5.2 38 554-593 111-148 (229)
403 smart00824 PKS_TE Thioesterase 83.7 6.1 0.00013 37.8 9.0 81 511-604 14-98 (212)
404 PRK13615 lipoprotein LpqB; Pro 83.7 84 0.0018 35.5 20.2 158 125-299 337-502 (557)
405 KOG0264 Nucleosome remodeling 83.6 13 0.00027 39.4 11.2 115 123-245 274-403 (422)
406 KOG0268 Sof1-like rRNA process 83.3 3.5 7.5E-05 42.3 6.8 113 125-249 233-348 (433)
407 KOG1963 WD40 repeat protein [G 83.2 18 0.00038 41.6 12.9 110 124-249 208-323 (792)
408 KOG0294 WD40 repeat-containing 83.2 57 0.0012 33.2 16.0 58 123-185 129-187 (362)
409 KOG4328 WD40 protein [Function 83.2 48 0.001 35.4 15.1 118 123-252 188-313 (498)
410 PLN02454 triacylglycerol lipas 83.1 1.8 3.8E-05 46.2 5.0 40 553-592 208-247 (414)
411 KOG0302 Ribosome Assembly prot 82.9 20 0.00043 37.2 12.0 117 121-249 257-379 (440)
412 KOG0316 Conserved WD40 repeat- 82.3 52 0.0011 32.1 16.5 54 123-181 61-116 (307)
413 KOG1920 IkappaB kinase complex 82.2 1.3E+02 0.0028 36.6 21.1 75 171-248 200-274 (1265)
414 PF03088 Str_synth: Strictosid 82.0 13 0.00029 30.5 8.6 52 147-202 36-88 (89)
415 KOG0307 Vesicle coat complex C 81.8 17 0.00036 43.1 12.4 149 123-282 118-275 (1049)
416 COG2939 Carboxypeptidase C (ca 81.7 5.2 0.00011 43.4 7.9 100 491-592 98-217 (498)
417 PF06259 Abhydrolase_8: Alpha/ 81.5 4.2 9E-05 38.3 6.3 53 552-608 92-145 (177)
418 KOG0265 U5 snRNP-specific prot 81.3 51 0.0011 33.4 13.8 93 149-249 197-297 (338)
419 KOG3724 Negative regulator of 81.1 2 4.4E-05 48.6 4.7 47 555-602 157-210 (973)
420 KOG2919 Guanine nucleotide-bin 81.1 68 0.0015 32.8 14.7 148 129-299 119-281 (406)
421 PLN02408 phospholipase A1 80.7 2.3 5.1E-05 44.7 4.8 40 554-593 181-220 (365)
422 KOG0277 Peroxisomal targeting 80.7 62 0.0013 32.0 14.9 143 124-280 63-210 (311)
423 KOG1524 WD40 repeat-containing 80.6 25 0.00054 38.2 12.1 93 124-230 107-201 (737)
424 KOG1551 Uncharacterized conser 80.2 4.2 9.2E-05 40.0 6.0 35 573-611 195-229 (371)
425 PLN02517 phosphatidylcholine-s 80.0 3.5 7.5E-05 45.9 6.0 75 512-593 158-233 (642)
426 PRK13613 lipoprotein LpqB; Pro 79.9 1.1E+02 0.0024 35.0 18.1 123 123-250 410-541 (599)
427 KOG2111 Uncharacterized conser 79.5 6.5 0.00014 39.7 7.1 59 123-185 183-245 (346)
428 PLN02571 triacylglycerol lipas 79.4 2.7 5.8E-05 45.0 4.8 40 553-593 206-246 (413)
429 KOG1034 Transcriptional repres 78.5 55 0.0012 33.5 13.2 207 117-345 133-381 (385)
430 KOG4227 WD40 repeat protein [G 78.4 70 0.0015 33.4 14.1 113 123-249 58-180 (609)
431 KOG0319 WD40-repeat-containing 77.9 71 0.0015 36.3 15.0 109 125-249 23-136 (775)
432 KOG4328 WD40 protein [Function 77.7 25 0.00054 37.5 11.0 139 123-274 236-383 (498)
433 PF04053 Coatomer_WDAD: Coatom 76.9 18 0.00038 39.7 10.4 140 124-299 35-175 (443)
434 KOG0639 Transducin-like enhanc 76.9 7.3 0.00016 41.7 7.0 100 123-235 594-694 (705)
435 PLN02606 palmitoyl-protein thi 76.9 30 0.00064 35.5 11.1 101 492-604 25-128 (306)
436 PLN02324 triacylglycerol lipas 76.3 3.6 7.8E-05 43.9 4.7 39 553-592 195-234 (415)
437 KOG0299 U3 snoRNP-associated p 75.8 96 0.0021 33.3 14.6 72 123-204 144-235 (479)
438 PLN02633 palmitoyl protein thi 75.4 34 0.00073 35.2 11.0 102 492-605 24-128 (314)
439 KOG0650 WD40 repeat nucleolar 75.2 21 0.00046 39.3 9.9 112 123-249 523-638 (733)
440 PLN02802 triacylglycerol lipas 75.1 4 8.7E-05 44.5 4.7 39 554-593 311-350 (509)
441 KOG0284 Polyadenylation factor 74.9 13 0.00028 38.9 8.0 120 103-232 243-367 (464)
442 KOG0641 WD40 repeat protein [G 74.9 82 0.0018 30.3 12.6 112 122-245 232-348 (350)
443 PF13449 Phytase-like: Esteras 74.5 1.2E+02 0.0025 31.9 17.5 79 124-202 149-252 (326)
444 TIGR02276 beta_rpt_yvtn 40-res 74.4 11 0.00023 25.5 5.3 28 131-162 1-28 (42)
445 PF15492 Nbas_N: Neuroblastoma 74.0 18 0.00038 36.3 8.4 64 127-201 3-73 (282)
446 KOG1920 IkappaB kinase complex 73.7 36 0.00079 40.9 12.1 117 127-246 201-320 (1265)
447 KOG1524 WD40 repeat-containing 73.0 1E+02 0.0022 33.8 14.1 88 124-236 189-277 (737)
448 KOG1963 WD40 repeat protein [G 72.9 34 0.00073 39.5 11.3 68 123-200 253-321 (792)
449 KOG0310 Conserved WD40 repeat- 72.4 1.5E+02 0.0032 32.1 19.6 114 123-251 112-228 (487)
450 KOG1520 Predicted alkaloid syn 72.1 25 0.00055 36.9 9.4 110 127-245 120-249 (376)
451 PF02089 Palm_thioest: Palmito 71.2 17 0.00036 36.9 7.7 51 554-605 61-113 (279)
452 KOG0295 WD40 repeat-containing 70.8 39 0.00084 35.0 10.1 91 129-230 299-391 (406)
453 KOG0290 Conserved WD40 repeat- 70.8 1.2E+02 0.0027 30.6 15.7 159 124-282 47-218 (364)
454 PLN00413 triacylglycerol lipas 70.3 6.7 0.00014 42.6 5.0 38 553-592 266-303 (479)
455 PHA03098 kelch-like protein; P 69.9 2E+02 0.0043 32.5 18.6 191 148-348 311-512 (534)
456 KOG2321 WD40 repeat protein [G 69.8 1.9E+02 0.004 32.2 15.5 197 125-345 55-343 (703)
457 KOG2369 Lecithin:cholesterol a 69.8 8.9 0.00019 41.3 5.7 77 511-596 125-205 (473)
458 PLN02753 triacylglycerol lipas 69.6 6.1 0.00013 43.4 4.5 41 552-592 288-331 (531)
459 PF07519 Tannase: Tannase and 69.4 5.9 0.00013 43.9 4.6 67 656-722 354-426 (474)
460 PF13360 PQQ_2: PQQ-like domai 69.3 1.2E+02 0.0025 29.7 22.6 130 149-299 4-140 (238)
461 PF05787 DUF839: Bacterial pro 69.2 33 0.00071 38.6 10.3 62 123-185 437-520 (524)
462 KOG0307 Vesicle coat complex C 69.2 14 0.00029 43.8 7.4 139 102-249 137-285 (1049)
463 PLN02761 lipase class 3 family 68.3 7 0.00015 42.9 4.7 41 552-592 269-313 (527)
464 PF07995 GSDH: Glucose / Sorbo 67.9 71 0.0015 33.6 12.2 104 126-237 6-134 (331)
465 KOG2521 Uncharacterized conser 67.3 1.3E+02 0.0027 31.8 13.4 218 493-724 38-291 (350)
466 PF15492 Nbas_N: Neuroblastoma 67.2 82 0.0018 31.7 11.3 34 124-162 46-79 (282)
467 TIGR03606 non_repeat_PQQ dehyd 66.4 1.1E+02 0.0023 33.8 13.2 106 126-237 34-166 (454)
468 TIGR03712 acc_sec_asp2 accesso 66.2 45 0.00098 36.3 10.0 120 473-612 273-394 (511)
469 PLN02310 triacylglycerol lipas 65.8 8.5 0.00019 41.1 4.7 40 553-592 187-228 (405)
470 KOG0310 Conserved WD40 repeat- 65.3 2.1E+02 0.0045 31.1 21.5 112 124-249 71-185 (487)
471 KOG0294 WD40 repeat-containing 65.3 1.7E+02 0.0036 30.0 19.1 135 130-280 50-188 (362)
472 PRK13614 lipoprotein LpqB; Pro 65.1 39 0.00084 38.3 9.9 79 123-203 435-520 (573)
473 KOG0269 WD40 repeat-containing 64.6 2.7E+02 0.0059 32.2 15.8 115 123-249 135-251 (839)
474 PLN02162 triacylglycerol lipas 64.6 10 0.00022 41.1 5.0 38 553-592 260-297 (475)
475 PF13449 Phytase-like: Esteras 64.2 1.9E+02 0.0041 30.3 18.9 178 166-347 19-251 (326)
476 KOG2111 Uncharacterized conser 63.8 99 0.0021 31.6 11.2 97 132-237 147-248 (346)
477 PLN02719 triacylglycerol lipas 63.6 10 0.00022 41.6 4.8 40 552-592 274-317 (518)
478 PLN02934 triacylglycerol lipas 63.3 11 0.00023 41.4 4.9 39 552-592 302-340 (515)
479 TIGR03300 assembly_YfgL outer 63.2 2.1E+02 0.0045 30.5 15.1 117 149-281 252-370 (377)
480 PLN03037 lipase class 3 family 62.7 9.8 0.00021 41.8 4.5 37 555-592 298-337 (525)
481 KOG4547 WD40 repeat-containing 62.4 71 0.0015 35.2 10.7 99 123-228 146-250 (541)
482 KOG0308 Conserved WD40 repeat- 62.3 1.5E+02 0.0033 33.3 13.2 108 145-263 190-299 (735)
483 KOG0270 WD40 repeat-containing 62.2 2.3E+02 0.0049 30.5 19.6 124 127-262 249-374 (463)
484 PRK13615 lipoprotein LpqB; Pro 61.7 56 0.0012 36.9 10.3 79 123-203 418-504 (557)
485 KOG1007 WD repeat protein TSSC 61.2 81 0.0018 31.8 9.9 104 123-238 172-281 (370)
486 KOG1523 Actin-related protein 60.9 87 0.0019 32.1 10.2 101 124-235 13-120 (361)
487 KOG0285 Pleiotropic regulator 59.9 2.2E+02 0.0049 29.7 17.5 56 124-184 154-211 (460)
488 KOG1063 RNA polymerase II elon 59.5 16 0.00035 40.8 5.4 58 122-184 573-636 (764)
489 PHA02713 hypothetical protein; 59.4 3.1E+02 0.0068 31.2 18.1 190 148-348 320-534 (557)
490 KOG0641 WD40 repeat protein [G 58.2 1.8E+02 0.0039 28.1 22.9 32 105-141 78-109 (350)
491 COG3204 Uncharacterized protei 58.0 2.2E+02 0.0048 29.0 20.6 114 123-247 87-211 (316)
492 PF12566 DUF3748: Protein of u 57.9 54 0.0012 28.0 7.0 17 171-187 72-88 (122)
493 KOG3914 WD repeat protein WDR4 57.7 2.6E+02 0.0056 29.6 14.3 109 129-250 115-225 (390)
494 KOG4378 Nuclear protein COP1 [ 57.7 2.9E+02 0.0063 30.2 17.5 155 123-299 123-280 (673)
495 TIGR02604 Piru_Ver_Nterm putat 56.5 2.7E+02 0.006 29.6 15.5 59 168-235 73-142 (367)
496 PF05694 SBP56: 56kDa selenium 56.4 43 0.00093 36.1 7.7 64 168-235 313-393 (461)
497 KOG4569 Predicted lipase [Lipi 54.6 16 0.00035 38.5 4.5 37 555-593 155-191 (336)
498 PF05787 DUF839: Bacterial pro 54.4 1.4E+02 0.003 33.6 11.9 23 213-235 499-521 (524)
499 PRK05579 bifunctional phosphop 53.3 75 0.0016 34.4 9.3 81 493-580 116-196 (399)
500 KOG4283 Transcription-coupled 53.1 2.6E+02 0.0056 28.4 11.9 113 122-245 102-218 (397)
No 1
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=100.00 E-value=5.1e-115 Score=912.27 Aligned_cols=644 Identities=32% Similarity=0.554 Sum_probs=602.4
Q ss_pred CCCCC--cccchHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcccCCCCCCeeECCeEEEEEecCCcceEEEEEE
Q 004866 1 MSSLN--DKVAMRHMDMYMEQEEKYAEAVMSDTERLQSKLQSEMASRLAFELSTPPLRWGPWLYYRRVEEGKQYLVLCRR 78 (726)
Q Consensus 1 ~~~~~--~~~~~~~v~~~l~~en~~~~~~l~~~~~l~~~l~~e~~~~~~~~~~s~p~~~g~~~yy~~~~~g~~~~~~~r~ 78 (726)
|||.+ +| +|++||+|||+||+++|+++++||++|++||++|+++++.|+|.++|+|+||+|+..|++|+++||.
T Consensus 30 lRd~~~~~p----~vl~yL~aEN~Yt~~~~a~~~~L~~~if~Ei~~Rik~dd~Svp~~~~~~~Yy~r~~~g~~y~~~~R~ 105 (682)
T COG1770 30 LRDDNWSNP----EVLAYLEAENAYTEAVMAHLQPLQKKIFEEIKGRIKEDDLSVPYRKGPYEYYSRTEEGKEYPIYCRQ 105 (682)
T ss_pred hhCCcccCh----HHHHHHHHhhHHHHHhhhhhHHHHHHHHHHHhhhccCcCCCCccccCCeeEEEEecCCCcceeEEec
Confidence 57766 88 9999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred ecCCccccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCC
Q 004866 79 LVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG 158 (726)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg 158 (726)
...+ ...|++|||+|+++.+++ |++++.+++|||+++|||+.|..|+|++.|.++|++||
T Consensus 106 ~~~g-------------------~~~eevlLD~n~~A~g~~-f~~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg 165 (682)
T COG1770 106 PDEG-------------------GEGEEVLLDVNKEAEGHD-FFSLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATG 165 (682)
T ss_pred cCCC-------------------CCceeEeecchhccCccc-ceeeeeeeeCCCCceEEEEEecccccEEEEEEEecccc
Confidence 6532 125899999999999988 99999999999999999999999999999999999999
Q ss_pred ceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCC
Q 004866 159 ALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 159 ~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
+.+.....+...+++|.+|+++|||++.++..++.+||+|.++++. .+++||+|.|+.|++++..|.+.+||++..++.
T Consensus 166 ~~~~d~i~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~ 245 (682)
T COG1770 166 EELPDEITNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRLGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSH 245 (682)
T ss_pred cccchhhcccccceEEecCCCeEEEEEEcCCCCcceEEEEecCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCC
Confidence 9888766666789999999999999999998899999999999976 889999999999999999999999999999999
Q ss_pred CceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCc
Q 004866 238 TSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGL 317 (726)
Q Consensus 238 ~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~ 317 (726)
.++++++++.+.+...++.+.++..+++|.++|.++.||+.+|..+ .||+|++.++ .++.+.|+.++++.++.
T Consensus 246 ~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~~eh~~d~f~i~sN~~g-----knf~l~~ap~--~~~~~~w~~~I~h~~~~ 318 (682)
T COG1770 246 ITSEVRLLDADDPEAEPKVVLPRENGVEYSVEHGGDRFYILSNADG-----KNFKLVRAPV--SADKSNWRELIPHREDV 318 (682)
T ss_pred cceeEEEEecCCCCCceEEEEEcCCCcEEeeeecCcEEEEEecCCC-----cceEEEEccC--CCChhcCeeeeccCCCc
Confidence 9999999999999888999999999999999999999999999876 3899999998 45678999999999999
Q ss_pred eEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCC
Q 004866 318 VVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMP 397 (726)
Q Consensus 318 ~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P 397 (726)
.|+++.+++++||+.++.+|.+++++.+..+++ .+.|.+++..++...+.+..++++.+++.++|+++|
T Consensus 319 ~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~-----------~~~i~f~~~ay~~~l~~~~e~~s~~lR~~ysS~ttP 387 (682)
T COG1770 319 RLEGVDLFADHLVLLERQEGLPRVVVRDRKTGE-----------ERGIAFDDEAYSAGLSGNPEFDSDRLRYSYSSMTTP 387 (682)
T ss_pred eeeeeeeeccEEEEEecccCCceEEEEecCCCc-----------eeeEEecchhhhccccCCCCCCCccEEEEeeccccc
Confidence 999999999999999999999999999876543 234777777666666778899999999999999999
Q ss_pred ceEEEEECCCCeEEEEEeeccccccccccccCcccccccccccccccccccccCCCCccCcCCCCceEEEEEEECCCCcE
Q 004866 398 DAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGIS 477 (726)
Q Consensus 398 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~ 477 (726)
.++|.+|+.+++.++|++++++.. | + ++.|..+++|+++.||++
T Consensus 388 ~~~~~~dm~t~er~~LkqqeV~~g--------~---------------------d-------p~~Y~s~riwa~a~dgv~ 431 (682)
T COG1770 388 ATLFDYDMATGERTLLKQQEVPGG--------F---------------------D-------PEDYVSRRIWATADDGVQ 431 (682)
T ss_pred ceeEEeeccCCcEEEEEeccCCCC--------C---------------------C-------hhHeEEEEEEEEcCCCcE
Confidence 999999999999999999988532 2 4 789999999999999999
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHH
Q 004866 478 VPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDF 557 (726)
Q Consensus 478 i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~ 557 (726)
||++|++.++.+.+++.||+|++||+||.++.+.|+.....|++||++.+++|+||+|+.|+.||++|+...|.++|.||
T Consensus 432 VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DF 511 (682)
T COG1770 432 VPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDF 511 (682)
T ss_pred eeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHH
Confidence 99999999998888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhH
Q 004866 558 ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDD 637 (726)
Q Consensus 558 ~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 637 (726)
++|+++|++++++++++|+++|+|+||+|+++++++.|++|+++|+.+||+|++++|+++++|++..+|.|||+|.+++.
T Consensus 512 Ia~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP~d~e~ 591 (682)
T COG1770 512 IAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPLDPEY 591 (682)
T ss_pred HHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCcCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCcccccccCCCCCeEEEEecC-CCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCCc-hhhHHHHH
Q 004866 638 FHAIRNYSPYDNIQKDVLYPAVLVTSSF-NTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEEN-RYLQCKES 713 (726)
Q Consensus 638 ~~~~~~~sp~~~i~~~~~~P~lli~g~~-D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~~ 713 (726)
+++|++|||+.||.+ ..+|++|+.+|. |+||.+||+.||+++||+.+++ .+|+++ .|++||++.+ +...+++.
T Consensus 592 y~yikSYSPYdNV~a-~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~td--~~plLlkt~M~aGHgG~SgRf~~lee~ 668 (682)
T COG1770 592 YDYIKSYSPYDNVEA-QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELKTD--GNPLLLKTNMDAGHGGASGRFQRLEEI 668 (682)
T ss_pred HHHHhhcCchhcccc-CCCCceEEEccccCCccccchHHHHHHHHhhcccC--CCcEEEEecccccCCCCCCchHHHHHH
Confidence 999999999999998 799999988887 5999999999999999999876 368888 7999999988 99999999
Q ss_pred HHHHHHHHHhhc
Q 004866 714 ALETAFLIKMME 725 (726)
Q Consensus 714 ~~~~~fl~~~l~ 725 (726)
|.+|+|+.+.++
T Consensus 669 A~eYaF~l~~~~ 680 (682)
T COG1770 669 AFEYAFLLKLAG 680 (682)
T ss_pred HHHHHHHhhhcc
Confidence 999999998875
No 2
>PRK10115 protease 2; Provisional
Probab=100.00 E-value=5e-98 Score=847.47 Aligned_cols=645 Identities=26% Similarity=0.432 Sum_probs=558.2
Q ss_pred CCCC--CcccchHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcccCCCCCCeeECCeEEEEEecCCcceEEEEEE
Q 004866 1 MSSL--NDKVAMRHMDMYMEQEEKYAEAVMSDTERLQSKLQSEMASRLAFELSTPPLRWGPWLYYRRVEEGKQYLVLCRR 78 (726)
Q Consensus 1 ~~~~--~~~~~~~~v~~~l~~en~~~~~~l~~~~~l~~~l~~e~~~~~~~~~~s~p~~~g~~~yy~~~~~g~~~~~~~r~ 78 (726)
|||. ++| +|++||++||+||+++|++++++|++|++||+++++.+++++|.+.|+|+||.+..+|.+++++||+
T Consensus 26 Led~~r~~~----~v~~~l~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~g~~~~~~~r~ 101 (686)
T PRK10115 26 LRDDTRSQP----EVLDYLHQENSYGHRVMASQQALQDRILKEIIDRIPQREVSAPYIKNGYRYRHIYEPGCEYAIYQRQ 101 (686)
T ss_pred hhCCCCCCH----HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHhhcccccCCCCEEECCEEEEEEEcCCCccEEEEEe
Confidence 5664 367 9999999999999999999889999999999999999999999999999999999999999999998
Q ss_pred ecCCccccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCC
Q 004866 79 LVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG 158 (726)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg 158 (726)
....+ ..+.|++|||+|+++.+++ ++.++.+.|||||++|||+.|..|+|+++|+++|+++|
T Consensus 102 ~~~~~-----------------~~~~~~~llD~n~~a~~~~-~~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg 163 (686)
T PRK10115 102 SAFSE-----------------EWDEWETLLDANKRAAHSE-FYTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETG 163 (686)
T ss_pred cCCCC-----------------CCCCCEEEEcchhhccCCC-cEEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCC
Confidence 64210 0145899999999987765 99999999999999999999999999999999999999
Q ss_pred ceeccccccccceeEEecCCCEEEEEEecCC-CCCceEEEEEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcC
Q 004866 159 ALCSKPQAVRVSNIAWAKDGQALIYVVTDQN-KRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFS 236 (726)
Q Consensus 159 ~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~-~~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~ 236 (726)
+.+..........++|++|++.|+|++.++. .++.+||+|+++++. ++++++++.+..+++....+.|++++++.+.+
T Consensus 164 ~~l~~~i~~~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~ 243 (686)
T PRK10115 164 NWYPELLDNVEPSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLAS 243 (686)
T ss_pred CCCCccccCcceEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEEC
Confidence 8655433332256999999999999988653 578999999999997 78899998888777777778899999998888
Q ss_pred CCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCC
Q 004866 237 TTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQG 316 (726)
Q Consensus 237 ~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~ 316 (726)
..+++++++++..+.+.++++.++..+..+.+.+.++.||+.+|.+++ +++|+++++. + ..+|+.|+++.++
T Consensus 244 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ly~~tn~~~~-----~~~l~~~~~~-~--~~~~~~l~~~~~~ 315 (686)
T PRK10115 244 ATTSEVLLLDAELADAEPFVFLPRRKDHEYSLDHYQHRFYLRSNRHGK-----NFGLYRTRVR-D--EQQWEELIPPREN 315 (686)
T ss_pred CccccEEEEECcCCCCCceEEEECCCCCEEEEEeCCCEEEEEEcCCCC-----CceEEEecCC-C--cccCeEEECCCCC
Confidence 888899999865443556677777777788888888999999997653 6899999986 3 3689999988777
Q ss_pred ceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCC
Q 004866 317 LVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVM 396 (726)
Q Consensus 317 ~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~ 396 (726)
..|+++.+++++|++..+++|.++++++++.++. ...++++........+.+.+++++.++++++|+++
T Consensus 316 ~~i~~~~~~~~~l~~~~~~~g~~~l~~~~~~~~~-----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~ 384 (686)
T PRK10115 316 IMLEGFTLFTDWLVVEERQRGLTSLRQINRKTRE-----------VIGIAFDDPAYVTWIAYNPEPETSRLRYGYSSMTT 384 (686)
T ss_pred CEEEEEEEECCEEEEEEEeCCEEEEEEEcCCCCc-----------eEEecCCCCceEeeecccCCCCCceEEEEEecCCC
Confidence 8899999999999999999999999999875321 12233322211112234445778889999999999
Q ss_pred CceEEEEECCCCeEEEEEeeccccccccccccCcccccccccccccccccccccCCCCccCcCCCCceEEEEEEECCCCc
Q 004866 397 PDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGI 476 (726)
Q Consensus 397 P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~ 476 (726)
|+++|.+|+.+++.+.++..+++. ++ +..+.+|++++++.||+
T Consensus 385 P~~~y~~d~~~~~~~~l~~~~~~~------------------------------~~-------~~~~~~e~v~~~s~DG~ 427 (686)
T PRK10115 385 PDTLFELDMDTGERRVLKQTEVPG------------------------------FD-------AANYRSEHLWITARDGV 427 (686)
T ss_pred CCEEEEEECCCCcEEEEEecCCCC------------------------------cC-------ccccEEEEEEEECCCCC
Confidence 999999999999888887654320 12 45679999999999999
Q ss_pred EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHH
Q 004866 477 SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKD 556 (726)
Q Consensus 477 ~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D 556 (726)
+||++|+++++...+++.|+||++||||+.++.+.|+...+.|+++||+|+++|+|||||||++|+++++..++.++++|
T Consensus 428 ~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D 507 (686)
T PRK10115 428 EVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFND 507 (686)
T ss_pred EEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHH
Confidence 99999999887555677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChh
Q 004866 557 FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDID 636 (726)
Q Consensus 557 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 636 (726)
+++|++||++++++|++||+|+|+|+||+|++++++++|++|+|+|+.+|++|+.++|.++++|++..++.+||+|++++
T Consensus 508 ~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~ 587 (686)
T PRK10115 508 YLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQ 587 (686)
T ss_pred HHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999998888898888899999999888
Q ss_pred HHHHHHhcCcccccccCCCCCeE-EEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCCc-hhhHHHH
Q 004866 637 DFHAIRNYSPYDNIQKDVLYPAV-LVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEEN-RYLQCKE 712 (726)
Q Consensus 637 ~~~~~~~~sp~~~i~~~~~~P~l-li~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~-~~~~~~~ 712 (726)
.+++|+++||++|+++ +++|+| ++||..|+|||++|+.+|+++|++++++ .+++++ .+++||++.. +...+++
T Consensus 588 ~~~~l~~~SP~~~v~~-~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~--~~~vl~~~~~~~GHg~~~~r~~~~~~ 664 (686)
T PRK10115 588 YYEYMKSYSPYDNVTA-QAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTD--DHLLLLCTDMDSGHGGKSGRFKSYEG 664 (686)
T ss_pred HHHHHHHcCchhccCc-cCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCC--CceEEEEecCCCCCCCCcCHHHHHHH
Confidence 8999999999999998 899965 5588889999999999999999999875 366766 5899998766 8899999
Q ss_pred HHHHHHHHHHhhcC
Q 004866 713 SALETAFLIKMMES 726 (726)
Q Consensus 713 ~~~~~~fl~~~l~~ 726 (726)
.|++++||.++|+.
T Consensus 665 ~A~~~aFl~~~~~~ 678 (686)
T PRK10115 665 VAMEYAFLIALAQG 678 (686)
T ss_pred HHHHHHHHHHHhCC
Confidence 99999999999874
No 3
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-94 Score=743.92 Aligned_cols=658 Identities=42% Similarity=0.661 Sum_probs=559.5
Q ss_pred CCCCCcccchHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcccCCCCCCeeECCeEEEEEecCCcceEEEEEEec
Q 004866 1 MSSLNDKVAMRHMDMYMEQEEKYAEAVMSDTERLQSKLQSEMASRLAFELSTPPLRWGPWLYYRRVEEGKQYLVLCRRLV 80 (726)
Q Consensus 1 ~~~~~~~~~~~~v~~~l~~en~~~~~~l~~~~~l~~~l~~e~~~~~~~~~~s~p~~~g~~~yy~~~~~g~~~~~~~r~~~ 80 (726)
|||.++. ++..||++||.||+++|++++..+ +|+.||+.|++++.+++|.|+|+|+||.++.+|+||+.+||+..
T Consensus 31 l~d~d~~----~~~~fv~~en~~t~~vl~~~e~~~-kl~~em~~~i~ye~~~~p~r~G~~yyY~~n~~lkq~vl~~rr~~ 105 (712)
T KOG2237|consen 31 LEDPDDT----EMKEFVEAENKYTDAVLEDTETKE-KLFSEMTKRIDYEIITPPLRWGPWYYYFYNTGLKQYVLYCRRLL 105 (712)
T ss_pred hcCCcHH----HHHHHHHHhhhhhHHHHhccHHHH-HHHHHhhhccCccccCCccccCCEEEEEEcCCceehhHHHHhhh
Confidence 4554444 899999999999999999997777 99999999999999999999999999999999999999999876
Q ss_pred CCc-cccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc
Q 004866 81 SLN-EEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA 159 (726)
Q Consensus 81 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~ 159 (726)
..+ .-+.++. . .....+|+||.|+++++++ |+..+-.+.|||.++|||..+..|+|.+++ |.++...+
T Consensus 106 ~~e~~~~ld~~---~------~~dd~tV~Ld~~~~aed~~-Y~~~gls~~spD~~~ia~~~~~~~~e~~~~-v~~~~~~~ 174 (712)
T KOG2237|consen 106 EKEEEVFLDPN---A------LGDDGTVLLDTNQIAEDFK-YFAYGLSESSPDHKYIAYTKDTEGKELFTV-VIDVKFSG 174 (712)
T ss_pred hcccceecCCc---c------CCCCceEEechhhhhhcCC-ceEEeecccCCCceEEEEEEcCCCCcccee-eeeeccCC
Confidence 221 1222111 1 1134569999999999987 999988889999999999999999999998 99999888
Q ss_pred eeccccccccceeEEec-CCCEEEEEEecCCCCCceEEEEEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCC
Q 004866 160 LCSKPQAVRVSNIAWAK-DGQALIYVVTDQNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 160 ~~~~~~~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
++......++..++|.. ||..|.|...+..+++.+||+|.+|+.+ +|++++++.|+++++...-..|+++..+.+.+.
T Consensus 175 ~~~~~~~~g~~y~~w~~~dg~~l~~~t~~~~~r~hkvy~h~~Gtdq~~Dvl~~~e~d~~~~vf~~~~kD~~~~~i~si~~ 254 (712)
T KOG2237|consen 175 PVWTHDGKGVSYLAWAKQDGEDLLYGTEDENNRPHKVYYHTLGTDQSEDVLLYEEKDEPKHVFISETKDSGFYTINSISE 254 (712)
T ss_pred ceeeccCCceEeeeecccCCceeeeeeeccccCcceEEEEecccCCCcceEEEecCCCCeEEEEEEEecCceEEEEEeec
Confidence 77654566888999998 9999999989999999999999999997 999999999999988888788887777777655
Q ss_pred Cc---eEEEEEeCCCCCCCeEE-eeccCCceEEeee------ecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCc
Q 004866 238 TS---SKVFLINAADPFSGLTL-IWECEGLAHCIVE------HHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTW 307 (726)
Q Consensus 238 ~~---~~l~~~d~~~~~~~~~~-l~~~~~~~~~~~~------~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 307 (726)
+. +.+|.+|+..+...++. +.++..++.++++ ..+..+++++|...+ ++++.++++. .+....|
T Consensus 255 t~s~~~~vf~~d~~~~~~gl~~~~~~~v~~v~~f~eh~~fi~~~~t~~~~~tn~~~p-----~y~l~r~~~~-~~~~~~W 328 (712)
T KOG2237|consen 255 TCSPVNKVFLCDLSSPSDGLELLILPRVKGVDCFVEHYDFITNEGTEFYFLTNKDAP-----NYYLLRIDVK-EPEESKW 328 (712)
T ss_pred cCCccceEEEEecccccCCcchheeeccchhhhhhhhhhheeccCcceeeeccCCCC-----ceeEEeeecc-Ccccccc
Confidence 54 59999999876555553 6677666655544 445889999997764 5999999998 7767899
Q ss_pred eEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEE-EecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcE
Q 004866 308 ESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCS-VSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSST 386 (726)
Q Consensus 308 ~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~-~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 386 (726)
+.++.+.+...++++.++++++++.....+...+.. .++ +.+..++.+++|.+.++..++ +++++.
T Consensus 329 ~~v~~e~~~~vl~~~~~~~~~~ll~~~~~~l~~i~q~~~~----------l~g~~~~~fpLpv~sv~~~~g---~~~~~~ 395 (712)
T KOG2237|consen 329 ETVFAEHEKDVLEDVDMVNDNLLLVCYMSDLKHILQVRDL----------LDGSLLRSFPLPVGSVSGTSG---DFKSST 395 (712)
T ss_pred ceeecccchhhhhhhhhhcCceEEEEEecCchhhcccccc----------ccCceeeeecCCCCccccccc---CCCCce
Confidence 999998888889999999888777777766654442 222 122345678899876655443 788999
Q ss_pred EEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccccCcccccccccccccccccccccCCCCccCcCCCCceEE
Q 004866 387 MRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCE 466 (726)
Q Consensus 387 ~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (726)
++|.++|+.+|+.||.||+.++..+ +++..+. +. .-||.+ .+.|+++
T Consensus 396 ~~f~~sS~l~P~~iy~yDl~~~~~e----~~vf~e~-~~---------------------------~lpg~~-~s~y~~~ 442 (712)
T KOG2237|consen 396 IRFQFSSFLTPGSIYDYDLANGKPE----PSVFREI-TV---------------------------VLPGFD-ASDYVVE 442 (712)
T ss_pred EEEEEeccCCCCeEEEeeccCCCCC----Ccceeee-cc---------------------------ccCccc-ccceEEE
Confidence 9999999999999999999988542 1221110 00 002222 5689999
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccccc
Q 004866 467 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 546 (726)
Q Consensus 467 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~ 546 (726)
+++++|.||++||++|++.++.+.+++.|++||+||||+..+++.|+.....|+++|++.+.+|+||+|++|.+||+.|+
T Consensus 443 r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~ 522 (712)
T KOG2237|consen 443 RIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGR 522 (712)
T ss_pred EEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccc
Confidence 99999999999999999988888888999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhh
Q 004866 547 RTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADY 626 (726)
Q Consensus 547 ~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~ 626 (726)
..++.|.++||++|++||+++|++.|+|+++.|+|+||++++++++++|+||+|+|+.+||+|+++++.++..|++...|
T Consensus 523 lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilplt~sd~ 602 (712)
T KOG2237|consen 523 LAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPLTTSDY 602 (712)
T ss_pred hhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCccccchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecC-CCCcChHHHHHHHHHHHhcCCCCCC--CcEEE--EcCCCC
Q 004866 627 EEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSF-NTRFGVWEAAKWVARVRESTIYDPK--RPILL--NLTTDI 701 (726)
Q Consensus 627 ~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~-D~~V~~~~~~~~~~~L~~~~~~~~~--~~~~~--~~~~gH 701 (726)
.+||+|.+.+.+-.|.+|||++++.++..+|.++|++.. |+||+++++.+|+++||++..+.+. +|+++ ++++||
T Consensus 603 ee~g~p~~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q~~pvll~i~~~agH 682 (712)
T KOG2237|consen 603 EEWGNPEDFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQTNPVLLRIETKAGH 682 (712)
T ss_pred cccCChhhhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhcCCCEEEEEecCCcc
Confidence 999999877777888899999999986679988887776 5999999999999999998766555 78988 899999
Q ss_pred CCCc-hhhHHHHHHHHHHHHHHhhcC
Q 004866 702 VEEN-RYLQCKESALETAFLIKMMES 726 (726)
Q Consensus 702 ~~~~-~~~~~~~~~~~~~fl~~~l~~ 726 (726)
+... +..++++.++.++||.+.+++
T Consensus 683 ~~~~~~~k~~~E~a~~yaFl~K~~~~ 708 (712)
T KOG2237|consen 683 GAEKPRFKQIEEAAFRYAFLAKMLNS 708 (712)
T ss_pred ccCCchHHHHHHHHHHHHHHHHHhcC
Confidence 9766 899999999999999999875
No 4
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-69 Score=560.40 Aligned_cols=620 Identities=24% Similarity=0.324 Sum_probs=472.4
Q ss_pred CCCCCcccchHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcccCCCCCCeeECCeEEEEEecCCcceEE-EEEEe
Q 004866 1 MSSLNDKVAMRHMDMYMEQEEKYAEAVMSDTERLQSKLQSEMASRLAFELSTPPLRWGPWLYYRRVEEGKQYLV-LCRRL 79 (726)
Q Consensus 1 ~~~~~~~~~~~~v~~~l~~en~~~~~~l~~~~~l~~~l~~e~~~~~~~~~~s~p~~~g~~~yy~~~~~g~~~~~-~~r~~ 79 (726)
|||++++ |+++|+++||+-|..+|... +-++.+.+++.+.+..++.++|...|+++|...+.. .|+. +||+.
T Consensus 9 lEd~~~~----eal~wv~~~N~~t~~~L~~~-~~~a~~~~~~~~l~d~~~~~~~~~~~~~~ynFw~D~--~~p~Glwr~t 81 (648)
T COG1505 9 LEDLDSA----EALKWVEAQNAKTREFLGED-SARAASDKRLLELWDYEDIPIPFERGGRYYNFWQDA--LYPRGLYRRT 81 (648)
T ss_pred hhcCCcH----HHHHHHHhhhhHHHHHhhcc-hhhHHHHHHHHHHhhccccCcceeccceeEEeeccc--cCcceeEEee
Confidence 7888999 99999999999999999998 788889999999999999999999988877765543 3433 56654
Q ss_pred cCCccccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc
Q 004866 80 VSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA 159 (726)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~ 159 (726)
.-. + .....+..+||+|.++++...+-...+++.+.+||+++++|+.+.+|++...++++|++||+
T Consensus 82 tl~-s-------------yrs~~p~WevLiD~d~Ls~~~g~~v~~~Gas~~~~~~R~l~s~S~gG~D~~~~re~Dlet~~ 147 (648)
T COG1505 82 TLE-T-------------YRSAKPEWEVLIDVDALSADLGDKVALGGASVLPDGTRLLYSLSIGGSDAGITREFDLETGE 147 (648)
T ss_pred cce-e-------------ecccCCCceeecCHHHHhhhcCCcEEEccceeCCCCCEEEEEecCCCCcceEEEEEEecccc
Confidence 211 0 00113677999999999877543567788888899999999999999999999999999998
Q ss_pred eeccccccccceeEEecCCCEEEEEEecCCC------CC---ceEEEEEcCCCC-ceeEEeeecCC-ceEEEEEEcCCCc
Q 004866 160 LCSKPQAVRVSNIAWAKDGQALIYVVTDQNK------RP---YQIYCSIIGSTD-EDALLLEESNE-NVYVNIRHTKDFH 228 (726)
Q Consensus 160 ~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~------~~---~~l~~~~l~t~~-~~~lv~~~~d~-~~~~~~~~s~Dg~ 228 (726)
.+... .-....+.|.+++ .++|.+..... -+ ..++++.+.+++ .++.|+...+- .++..+.++.|++
T Consensus 148 fv~~~-~f~~~~~~wld~d-~~~~~~~~~~~e~T~sGy~~~~~~~krg~~f~~~~~dv~V~a~~~~~~~~~~~~~~~~~~ 225 (648)
T COG1505 148 FVEEE-GFKFPGISWLDDD-GVFVSRYWRPKEKTPSGYPRVVKRLKRGKLFEGQEGDVMVNARGDQDPWGFRLVLSEDGD 225 (648)
T ss_pred cccCC-CccccceEEecCC-CEEEecccCCcccCccCCchHhhhhhhcccccCCCCceEEecccccCCccceEEEeeccc
Confidence 76542 1223348999988 67776554311 11 245666677776 67777654321 1222344555666
Q ss_pred EEEEEEcCCCc--eEEEEEeCCCCCC-CeEE-eeccCCceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCC
Q 004866 229 FVCVHTFSTTS--SKVFLINAADPFS-GLTL-IWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPS 304 (726)
Q Consensus 229 ~l~~~~~~~~~--~~l~~~d~~~~~~-~~~~-l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~ 304 (726)
+++....-... ..++ +++-+..+ .... +..-..+ .-..+.+.+.|++.+.... ..
T Consensus 226 ~f~~~~~~~~~~~~~~~-l~~p~~~~~~~~~l~~~~r~d-w~~~~~~~g~l~l~~~e~~-------------------~~ 284 (648)
T COG1505 226 FFMLSLWLGTSGKGLIK-LGLPDKVGYEWGKLVNTLRAD-WTFADVDYGLLYLLTDEDL-------------------EL 284 (648)
T ss_pred hhhheeeEeccCCCcee-ccCCccccceeeeeeEeeccc-ccccCcccceEEEEehhcc-------------------cc
Confidence 55433322111 1222 22211000 0000 0000000 0001112233333332211 11
Q ss_pred CCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCC
Q 004866 305 RTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYS 384 (726)
Q Consensus 305 ~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 384 (726)
+.-..++.+.+...++.+...++++++...++...++.++++.. +.. .++++|... .+... +.+.++
T Consensus 285 g~~~a~~~P~~~~~le~v~tt~~~~va~~l~nv~~~l~v~~~~g------~~~-----~~v~l~~~g-a~~~~-~~~~~g 351 (648)
T COG1505 285 GKVIAEFIPEEEQSLEQVVTTKDKLVAGTLDNVSGRLEVYDLKG------ERI-----EEVELPPPG-ALGMG-SADKDG 351 (648)
T ss_pred CceeEEecCCcccceeeeEEEcCeEEeeeehhccceEEEeccCc------eEe-----eecccCCcc-ceeec-cCCCCC
Confidence 11222455667788999999999999999999988888887642 222 245555421 11112 346789
Q ss_pred cEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccccCcccccccccccccccccccccCCCCccCcCCCCce
Q 004866 385 STMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYS 464 (726)
Q Consensus 385 ~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (726)
+.+.+.++|+++|+.+|+++..+++++.++.+.+. || .+.+.
T Consensus 352 ~ev~l~~t~F~tP~~~~r~~~~~~eLe~ik~~p~~-------------------------------FD-------a~~~~ 393 (648)
T COG1505 352 DEVFLAFTSFTTPSTLYRLDLFGGELEVIREQPVQ-------------------------------FD-------ADNYE 393 (648)
T ss_pred cEEEEEeecccCCCceEEEecCCceehhhhhccCC-------------------------------cC-------ccCce
Confidence 99999999999999999999999999888766542 24 67899
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
+|+.+.+|.||++||++|++ |+.+.+ +.|++||.|||+.....|.|+..+..|+++|.+.+++|+||+||||.+||++
T Consensus 394 veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~A 471 (648)
T COG1505 394 VEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQA 471 (648)
T ss_pred EEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHH
Confidence 99999999999999999999 887777 8999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChh
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAA 624 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~ 624 (726)
+.+.++++.++||+|+++.|++++++.|.+|||.|+|.||+|+.++++|+|++|.|+|+.+|++||++ ++.++.+..
T Consensus 472 a~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlR---Yh~l~aG~s 548 (648)
T COG1505 472 GMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLR---YHLLTAGSS 548 (648)
T ss_pred HhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhh---hcccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 455677788
Q ss_pred hhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecC-CCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCC
Q 004866 625 DYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSF-NTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDI 701 (726)
Q Consensus 625 ~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~-D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH 701 (726)
|..|||+|.+++++..+.+|||++|++...++|+.||+.+. |+||+|.|+++|+++|++++ .|+++ .-++||
T Consensus 549 W~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~-----~pv~~~e~t~gGH 623 (648)
T COG1505 549 WIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVG-----APVLLREETKGGH 623 (648)
T ss_pred hHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcC-----CceEEEeecCCcc
Confidence 99999999999999999999999999987899988887765 79999999999999999998 35666 568999
Q ss_pred CCCc-hhhHHHHHHHHHHHHHHhhc
Q 004866 702 VEEN-RYLQCKESALETAFLIKMME 725 (726)
Q Consensus 702 ~~~~-~~~~~~~~~~~~~fl~~~l~ 725 (726)
++.+ ....+.+.+..++||.++|+
T Consensus 624 ~g~~~~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 624 GGAAPTAEIARELADLLAFLLRTLG 648 (648)
T ss_pred cCCCChHHHHHHHHHHHHHHHHhhC
Confidence 9877 66778899999999999985
No 5
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=100.00 E-value=3.3e-49 Score=431.55 Aligned_cols=374 Identities=29% Similarity=0.481 Sum_probs=307.2
Q ss_pred CCCCCcccchHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhhcccCCCCCCeeECCeEEEEEecCCcceEEEEEEec
Q 004866 1 MSSLNDKVAMRHMDMYMEQEEKYAEAVMSDTERLQSKLQSEMASRLAFELSTPPLRWGPWLYYRRVEEGKQYLVLCRRLV 80 (726)
Q Consensus 1 ~~~~~~~~~~~~v~~~l~~en~~~~~~l~~~~~l~~~l~~e~~~~~~~~~~s~p~~~g~~~yy~~~~~g~~~~~~~r~~~ 80 (726)
|||.++| +|++||++||+||+++|+++++++++|++||++++..+..++|.+.|+|+||.+..++++|+++||+..
T Consensus 25 Led~~~~----~v~~~~~~en~~t~~~l~~~~~~~~~l~~~~~~~~~~~~~~~p~~~g~~~y~~~~~~~~~~~~~~r~~~ 100 (414)
T PF02897_consen 25 LEDDDSP----EVLAWLKAENAYTEAYLAQLKPLREKLYEELKARINEDRESVPVRRGGYYYYSRNQGGKNYPVLYRRKT 100 (414)
T ss_dssp GGSTTSH----HHHHHHHHHHHHHHHHHHTSHTCHHHHHHHHHHHCSSSEE---EEETTEEEEEEE-SS-SS-EEEEEET
T ss_pred hcCCCCH----HHHHHHHHHHHHHHHhhcccCchHHHHHHHHHhhccCCCccccEEECCeEEEEEEcCCCceEEEEEEec
Confidence 7888888 999999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred CCccccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce
Q 004866 81 SLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL 160 (726)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~ 160 (726)
... ....+++|||+|+++.+++ ++.++.+++||||++|||+.+.+|+|.++|+|+|+++|+.
T Consensus 101 ~~~-----------------~~~~~evllD~n~l~~~~~-~~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~ 162 (414)
T PF02897_consen 101 DEE-----------------DGPEEEVLLDPNELAKDGG-YVSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKF 162 (414)
T ss_dssp TS------------------TS-C-EEEEEGGGGSTTSS--EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEE
T ss_pred ccC-----------------CCCceEEEEcchHhhccCc-eEEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcC
Confidence 410 0123599999999999865 8888899999999999999999999999999999999988
Q ss_pred eccccc-cccceeEEecCCCEEEEEEecCCCC------CceEEEEEcCCCC-ceeEEeeecCCce-EEEEEEcCCCcEEE
Q 004866 161 CSKPQA-VRVSNIAWAKDGQALIYVVTDQNKR------PYQIYCSIIGSTD-EDALLLEESNENV-YVNIRHTKDFHFVC 231 (726)
Q Consensus 161 ~~~~~~-~~~~~~~WspDg~~l~y~~~~~~~~------~~~l~~~~l~t~~-~~~lv~~~~d~~~-~~~~~~s~Dg~~l~ 231 (726)
+..... .....+.|++||+.|||++.+...+ +.+||+|++|++. ++.+||++.+..+ ++++.+|+||++|+
T Consensus 163 l~d~i~~~~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~ 242 (414)
T PF02897_consen 163 LPDGIENPKFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLF 242 (414)
T ss_dssp EEEEEEEEESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEE
T ss_pred cCCcccccccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEE
Confidence 765442 3344499999999999999887666 8999999999998 7799999999888 88999999999999
Q ss_pred EEEcCCCc-eEEEEEeCCCC---CCCeEEeeccCCceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCc
Q 004866 232 VHTFSTTS-SKVFLINAADP---FSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTW 307 (726)
Q Consensus 232 ~~~~~~~~-~~l~~~d~~~~---~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 307 (726)
+.+.++.+ +++|++|+..+ ...++++.++..+..+.+.+.|+.||++||.+.+ +++|++++++ .+....|
T Consensus 243 i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~-----~~~l~~~~l~-~~~~~~~ 316 (414)
T PF02897_consen 243 ISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAP-----NGRLVAVDLA-DPSPAEW 316 (414)
T ss_dssp EEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-T-----T-EEEEEETT-STSGGGE
T ss_pred EEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCC-----CcEEEEeccc-ccccccc
Confidence 99998888 99999999874 4578999999999999999999999999997653 6999999998 6655567
Q ss_pred e-EEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC-CCCCCcceeecccccccccCCCceeeeecCCCCcCCCc
Q 004866 308 E-SVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP-LPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSS 385 (726)
Q Consensus 308 ~-~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 385 (726)
. .++++.++..++++..++++||+..+++|.++|.++++. +. ....+++|.. +++. +.+.+++++
T Consensus 317 ~~~l~~~~~~~~l~~~~~~~~~Lvl~~~~~~~~~l~v~~~~~~~-----------~~~~~~~p~~-g~v~-~~~~~~~~~ 383 (414)
T PF02897_consen 317 WTVLIPEDEDVSLEDVSLFKDYLVLSYRENGSSRLRVYDLDDGK-----------ESREIPLPEA-GSVS-GVSGDFDSD 383 (414)
T ss_dssp EEEEE--SSSEEEEEEEEETTEEEEEEEETTEEEEEEEETT-TE-----------EEEEEESSSS-SEEE-EEES-TT-S
T ss_pred eeEEcCCCCceeEEEEEEECCEEEEEEEECCccEEEEEECCCCc-----------EEeeecCCcc-eEEe-ccCCCCCCC
Confidence 7 566666667899999999999999999999999999986 21 1235666653 2222 345678899
Q ss_pred EEEEEEccCCCCceEEEEECCCCeEEEEEe
Q 004866 386 TMRFAISSPVMPDAVVDYDLSYGKWNIIQQ 415 (726)
Q Consensus 386 ~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~ 415 (726)
.++|.++|+++|+.+|.||+++++.+++++
T Consensus 384 ~~~~~~ss~~~P~~~y~~d~~t~~~~~~k~ 413 (414)
T PF02897_consen 384 ELRFSYSSFTTPPTVYRYDLATGELTLLKQ 413 (414)
T ss_dssp EEEEEEEETTEEEEEEEEETTTTCEEEEEE
T ss_pred EEEEEEeCCCCCCEEEEEECCCCCEEEEEe
Confidence 999999999999999999999999998875
No 6
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-46 Score=422.62 Aligned_cols=524 Identities=17% Similarity=0.176 Sum_probs=357.3
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCC----C---------
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQN----K--------- 190 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~----~--------- 190 (726)
+..+.|||||+.+++.. ..+....++|+.+.. | .............|+|+|+.+.+...... .
T Consensus 62 ~~~~~~spdg~~~~~~~-~~~~~~~~l~l~~~~-g--~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (620)
T COG1506 62 VSELRWSPDGSVLAFVS-TDGGRVAQLYLVDVG-G--LITKTAFGVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRL 137 (620)
T ss_pred ccccccCCCCCEEEEEe-ccCCCcceEEEEecC-C--ceeeeecccccceeCCCCCeEEEEecccccccCCceeeeeccc
Confidence 55678999999999987 345556789999988 5 11112345678899999999998322111 0
Q ss_pred ---------CCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC----ceEEEEEeCCCCCCCeEEe
Q 004866 191 ---------RPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT----SSKVFLINAADPFSGLTLI 257 (726)
Q Consensus 191 ---------~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~----~~~l~~~d~~~~~~~~~~l 257 (726)
....+|+.+..+ ... .... .........+..+++.++....... ....++....+ +.+..+
T Consensus 138 ~~~~~~~g~~~~~l~~~d~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 211 (620)
T COG1506 138 PVWFDGRGGERSDLYVVDIES-KLI--KLGL-GNLDVVSFATDGDGRLVASIRLDDDADPWVTNLYVLIEGN--GELESL 211 (620)
T ss_pred ceeecCCCCcccceEEEccCc-ccc--cccC-CCCceeeeeeCCCCceeEEeeeccccCCceEeeEEEecCC--CceEEE
Confidence 112233333322 000 0001 1112234555666666655554332 12333333323 444455
Q ss_pred eccCCc-eEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeec-C--C-CceEEEEeeeCCEEEEE
Q 004866 258 WECEGL-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID-D--Q-GLVVEDVDFCKTHMALI 332 (726)
Q Consensus 258 ~~~~~~-~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~-~--~-~~~l~~~~~~~~~lv~~ 332 (726)
.+.... ....+..+|+.+++..+..... ...+..++..+.. . ......... + . ...+... ..++.+++.
T Consensus 212 ~~~~~~~~~~~~~~~gk~~~~~~~~~~~~-~~~~~~~~~~~~~-~---~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 285 (620)
T COG1506 212 TPGEGSISKLAFDADGKSIALLGTESDRG-LAEGDFILLLDGE-L---GEVDGDLSSGDDTRGAWAVEGG-LDGDGLLFI 285 (620)
T ss_pred cCCCceeeeeeeCCCCCeeEEeccCCccC-ccccceEEEEecc-c---cccceeeccCCcccCcHHhccc-cCCCcEEEE
Confidence 544332 3345567888888887754321 1122333333311 0 000000011 0 0 0111111 344566666
Q ss_pred EEe-CCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004866 333 LRE-GRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 411 (726)
Q Consensus 333 ~~~-~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~ 411 (726)
... .|...+...+..... ...+..+.. .+. + ++.+++.+++.++++..|+++|.++. ++..
T Consensus 286 ~~~~~g~~~l~~~~~~~~~-----------~~~~~~~~~--~v~-~--f~~~~~~~~~~~s~~~~p~~i~~~~~--~~~~ 347 (620)
T COG1506 286 ATDGGGSSPLFRVDDLGGG-----------VEGLSGDDG--GVP-G--FDVDGRKLALAYSSPTEPPEIYLYDR--GEEA 347 (620)
T ss_pred EecCCCceEEEEEeccCCc-----------eeeecCCCc--eEE-E--EeeCCCEEEEEecCCCCccceEEEcC--CCce
Confidence 655 555555554422110 011222211 111 2 23488999999999999999999987 3323
Q ss_pred EEEeeccccccccccccCcccccccccccccccccccccCCCCccCcCCCCceEEEEEEECCCCcEEEEEEEEcCCCCCC
Q 004866 412 IIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSEFYSCEQYDVPSHDGISVPLTIIYSPKYKKE 491 (726)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~ 491 (726)
.+..... .++......++|.+++++.||.+|++|++.|+++.+.
T Consensus 348 ~~~~~~~------------------------------------~~~~~~~~~~~e~~~~~~~dG~~i~~~l~~P~~~~~~ 391 (620)
T COG1506 348 KLTSSNN------------------------------------SGLKKVKLAEPEPVTYKSNDGETIHGWLYKPPGFDPR 391 (620)
T ss_pred EEeeccc------------------------------------ccccccccCCceEEEEEcCCCCEEEEEEecCCCCCCC
Confidence 3322211 1122256788999999999999999999999998888
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 571 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 571 (726)
+++|+||++||||..+....|....+.|+++||+|+.+|+||+++||++|.++..+.++..+++|+++++++|.+++.+|
T Consensus 392 k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d 471 (620)
T COG1506 392 KKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVD 471 (620)
T ss_pred CCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcC
Confidence 88999999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCcccccc
Q 004866 572 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQ 651 (726)
Q Consensus 572 ~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~ 651 (726)
++||+|+|+||||||+++++++.| +|+|+++..+.+++..++...+.++........+.+.. ..+.|.++||+.+++
T Consensus 472 ~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~sp~~~~~ 548 (620)
T COG1506 472 PERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGESTEGLRFDPEENGGGPPE--DREKYEDRSPIFYAD 548 (620)
T ss_pred hHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccchhhcCCHHHhCCCccc--ChHHHHhcChhhhhc
Confidence 999999999999999999999876 89999999999988876555444433222222233332 456789999999999
Q ss_pred cCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCCchhhHHHHHHHHHHHHHHhhcC
Q 004866 652 KDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMMES 726 (726)
Q Consensus 652 ~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~ 726 (726)
+ +++|+|||||..|.|||++|+++|+++|+.+|++ +.+ +|++||++....++.+.....++|+.++|+.
T Consensus 549 ~-i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~-----~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 549 N-IKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKP-----VELVVFPDEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred c-cCCCEEEEeecCCccCChHHHHHHHHHHHHcCce-----EEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 7 9999999999999999999999999999998854 333 8999999887778888888899999999863
No 7
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-33 Score=293.27 Aligned_cols=298 Identities=19% Similarity=0.261 Sum_probs=233.8
Q ss_pred CCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeeccccccccccccCcccccccccccccccccccccCCCCccCcCCC
Q 004866 382 YYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQNMLRERTRILYGTASSATISLNAKSGESVNELKSDSDNLWNDLSE 461 (726)
Q Consensus 382 ~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 461 (726)
.+-+.++..++|...|+++..|.+..++-..+..+.... .++.+.+.. +++
T Consensus 559 ~~~d~fv~~~~sv~sP~cv~~y~ls~~~~~~l~~q~~~~-------------~~l~~~~~~----------------~Pd 609 (867)
T KOG2281|consen 559 QQCDHFVSYYSSVGSPPCVSLYSLSWPENDPLPKQVSFW-------------AILVSGAPP----------------PPD 609 (867)
T ss_pred hhhhhHhhhhhcCCCCceEEEEeccCCccCcccchhhHH-------------HHHHhcCCC----------------CCc
Confidence 334447778899999999999988877654443222110 112111111 144
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCC-CccchH----HHHHHHHCCcEEEEEccCCCCC
Q 004866 462 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRWRS----ELKSLLDRGWVVAFADVRGGGG 536 (726)
Q Consensus 462 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~-~~~~~~----~~~~l~~~G~~v~~~d~RG~g~ 536 (726)
...+|.+.+.+.-|..+.+.|+.|.++++++|+|+++++||||+.+. ..+|.. ..+.|+++||+|+.+|-||+-.
T Consensus 610 y~p~eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~h 689 (867)
T KOG2281|consen 610 YVPPEIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAH 689 (867)
T ss_pred cCChhheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccc
Confidence 55568888999889999999999999999999999999999999873 455643 4578999999999999999999
Q ss_pred CCCcccccccccCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccccc
Q 004866 537 GGKKWHHDGRRTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL 615 (726)
Q Consensus 537 ~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~ 615 (726)
.|..|....+...|..+++|.+.++++|+++ |++|.+||+|.||||||||++..+.++|++|++||+.+|+.+|..
T Consensus 690 RGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~--- 766 (867)
T KOG2281|consen 690 RGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRL--- 766 (867)
T ss_pred cchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeee---
Confidence 9999999999999999999999999999998 599999999999999999999999999999999999999999873
Q ss_pred CCCCCCChhhhcc--cCCCCChhHHHHHHhcCcccccccCCCCC--eEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCC
Q 004866 616 YPILPLIAADYEE--FGYPGDIDDFHAIRNYSPYDNIQKDVLYP--AVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 691 (726)
Q Consensus 616 ~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~sp~~~i~~~~~~P--~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 691 (726)
+++ .|.| +|.|...+ ..|.+-|-..++.+...-| +||+||-.|.+|.+.+...++.+|.++|++ -
T Consensus 767 YDT------gYTERYMg~P~~nE--~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKp---y 835 (867)
T KOG2281|consen 767 YDT------GYTERYMGYPDNNE--HGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKP---Y 835 (867)
T ss_pred ecc------cchhhhcCCCccch--hcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCc---e
Confidence 222 2333 47775422 2344455555555422223 788999999999999999999999999964 1
Q ss_pred cEEEEcCCCCCCCchhhHHHHHHHHHHHHHH
Q 004866 692 PILLNLTTDIVEENRYLQCKESALETAFLIK 722 (726)
Q Consensus 692 ~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 722 (726)
.+.+||++-|+....+..+...++.+.||.+
T Consensus 836 eL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 836 ELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 2233899999877777777778888999875
No 8
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.3e-29 Score=285.40 Aligned_cols=238 Identities=20% Similarity=0.271 Sum_probs=194.1
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCC-ccch--HHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCC
Q 004866 474 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD-KRWR--SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKK 550 (726)
Q Consensus 474 dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~-~~~~--~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 550 (726)
||....+.++.|+++.+.+++|+|+++||||+++.- ..|. .....+..+|++|+.+|+||+|++|..+..+..++.|
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 899999999999999888999999999999985532 2232 2334566799999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCC-CceeEEEEeCCcccccccccCCCCCCChhhhcc-
Q 004866 551 LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCP-DLFRAVVLEVPFLDATNTLLYPILPLIAADYEE- 628 (726)
Q Consensus 551 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p-~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~- 628 (726)
..+++|.+.+++++++.+++|++||+|+|+|+||||++.++...| +.|+|+++.+||+|+. + .+.. .-.+
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~-yds~------~tery 657 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-Y-YDST------YTERY 657 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-e-eccc------ccHhh
Confidence 999999999999999999999999999999999999999999887 8999999999999998 2 2221 1112
Q ss_pred cCCCCChhHHHHHHhcCcccccccCCCCCe-EEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchh
Q 004866 629 FGYPGDIDDFHAIRNYSPYDNIQKDVLYPA-VLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRY 707 (726)
Q Consensus 629 ~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~-lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~ 707 (726)
.|.|.+.. ..+.+.++..++.. ++.|. ||+||..|++|+++|+.+++++|+.+|++. + +++||+++|+...+.
T Consensus 658 mg~p~~~~--~~y~e~~~~~~~~~-~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~--~-~~vypde~H~is~~~ 731 (755)
T KOG2100|consen 658 MGLPSEND--KGYEESSVSSPANN-IKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPF--R-LLVYPDENHGISYVE 731 (755)
T ss_pred cCCCcccc--chhhhccccchhhh-hccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCce--E-EEEeCCCCccccccc
Confidence 36665422 22677788877776 67776 899999999999999999999999999762 2 222899999987755
Q ss_pred hHHHHHHHHHHHHHHhhc
Q 004866 708 LQCKESALETAFLIKMME 725 (726)
Q Consensus 708 ~~~~~~~~~~~fl~~~l~ 725 (726)
...........|+...++
T Consensus 732 ~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 732 VISHLYEKLDRFLRDCFG 749 (755)
T ss_pred chHHHHHHHHHHHHHHcC
Confidence 444455556788875553
No 9
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.98 E-value=6e-32 Score=267.48 Aligned_cols=210 Identities=21% Similarity=0.283 Sum_probs=168.6
Q ss_pred ccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHH
Q 004866 510 KRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAA 589 (726)
Q Consensus 510 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~ 589 (726)
++|+...+.|+++||+|+.+|+||+++||..|+..+.+.++...++|+++++++|++++.+|++||+|+|+|+||+++++
T Consensus 1 ~~f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~ 80 (213)
T PF00326_consen 1 PSFNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALL 80 (213)
T ss_dssp ---SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHH
T ss_pred CeeeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccch
Confidence 35788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCC-ChhHHHHHHhcCcccccccCCCCCeEEEEecCCCC
Q 004866 590 AINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPG-DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTR 668 (726)
Q Consensus 590 ~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~ 668 (726)
++.++|++|+|+|+.+|++|+......... +...++.+++.+. .++.+..+..++++.++. ++.|+||+||..|.+
T Consensus 81 ~~~~~~~~f~a~v~~~g~~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~--~~~P~li~hG~~D~~ 157 (213)
T PF00326_consen 81 AATQHPDRFKAAVAGAGVSDLFSYYGTTDI-YTKAEYLEYGDPWDNPEFYRELSPISPADNVQ--IKPPVLIIHGENDPR 157 (213)
T ss_dssp HHHHTCCGSSEEEEESE-SSTTCSBHHTCC-HHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCG--GGSEEEEEEETTBSS
T ss_pred hhcccceeeeeeeccceecchhcccccccc-cccccccccCccchhhhhhhhhcccccccccc--CCCCEEEEccCCCCc
Confidence 999999999999999999998876544332 2233566678774 333344444444444422 578999999999999
Q ss_pred cChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHhhc
Q 004866 669 FGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 725 (726)
Q Consensus 669 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 725 (726)
||+.++.+++++|++++++ ..+++++++||++...........+.++||.++|+
T Consensus 158 Vp~~~s~~~~~~L~~~g~~---~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 158 VPPSQSLRLYNALRKAGKP---VELLIFPGEGHGFGNPENRRDWYERILDFFDKYLK 211 (213)
T ss_dssp STTHHHHHHHHHHHHTTSS---EEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHhcCCC---EEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcC
Confidence 9999999999999999854 12222899999877655666888899999999986
No 10
>PRK10566 esterase; Provisional
Probab=99.85 E-value=5e-20 Score=187.08 Aligned_cols=229 Identities=13% Similarity=0.102 Sum_probs=149.9
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccc-cccc--cCCCCcH
Q 004866 478 VPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHH-DGRR--TKKLNSI 554 (726)
Q Consensus 478 i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~-~~~~--~~~~~~~ 554 (726)
+....+.|++. .+++.|+||++||..+.. ..|......|+++||.|+++|+||+|........ .... .......
T Consensus 12 ~~~~~~~p~~~-~~~~~p~vv~~HG~~~~~--~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~ 88 (249)
T PRK10566 12 IEVLHAFPAGQ-RDTPLPTVFFYHGFTSSK--LVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNM 88 (249)
T ss_pred cceEEEcCCCC-CCCCCCEEEEeCCCCccc--chHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHH
Confidence 44456677642 235689999999975543 3567778899999999999999998753111000 0000 0011356
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEe-CCcccccccccCCCCCCChhhhcccCCCC
Q 004866 555 KDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE-VPFLDATNTLLYPILPLIAADYEEFGYPG 633 (726)
Q Consensus 555 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~-~p~~d~~~~~~~~~~~~~~~~~~~~g~~~ 633 (726)
+|+.++++++.+++.+|++||+++|+|+||++++.++.++|++.++++.. ++.+........+... ...+.
T Consensus 89 ~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 160 (249)
T PRK10566 89 QEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTLFPPLI--------PETAA 160 (249)
T ss_pred HHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHhccccc--------ccccc
Confidence 78888999999988899999999999999999999999888765443322 2222111000000000 00011
Q ss_pred C----hhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE-EcCCCCCCCchhh
Q 004866 634 D----IDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDIVEENRYL 708 (726)
Q Consensus 634 ~----~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH~~~~~~~ 708 (726)
. .+....+..+++...+.+..+.|.|++||..|..||+.++.+++++|+.++++. +..++ ++++||+..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~--~~~~~~~~~~~H~~~---- 234 (249)
T PRK10566 161 QQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDK--NLTCLWEPGVRHRIT---- 234 (249)
T ss_pred cHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCc--ceEEEecCCCCCccC----
Confidence 0 112233445566555655226899999999999999999999999999987531 22333 899999753
Q ss_pred HHHHHHHHHHHHHHhh
Q 004866 709 QCKESALETAFLIKMM 724 (726)
Q Consensus 709 ~~~~~~~~~~fl~~~l 724 (726)
......+.+||.++|
T Consensus 235 -~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 235 -PEALDAGVAFFRQHL 249 (249)
T ss_pred -HHHHHHHHHHHHhhC
Confidence 245677889999875
No 11
>PRK13604 luxD acyl transferase; Provisional
Probab=99.84 E-value=2e-19 Score=180.96 Aligned_cols=224 Identities=12% Similarity=0.055 Sum_probs=154.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCC-CCCCCccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGG-GGGGKKWH 542 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~-g~~g~~~~ 542 (726)
.+....+.+.||.+|.+|+..|++. ...+.|+||.+||--+.. ..|...+.+|+++||+|+.+|.||+ |+++..+.
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~~-~~~~~~~vIi~HGf~~~~--~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~ 84 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKEN-SPKKNNTILIASGFARRM--DHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTID 84 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCccc-CCCCCCEEEEeCCCCCCh--HHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccc
Confidence 3444557889999999999998753 245678999999743322 3477788999999999999999987 88776664
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCC-----
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYP----- 617 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~----- 617 (726)
..... ....|+.++++||.++ +.++|++.|+||||.++..++.. + ..+++|+.+|+.++...+...
T Consensus 85 ~~t~s----~g~~Dl~aaid~lk~~---~~~~I~LiG~SmGgava~~~A~~-~-~v~~lI~~sp~~~l~d~l~~~~~~~~ 155 (307)
T PRK13604 85 EFTMS----IGKNSLLTVVDWLNTR---GINNLGLIAASLSARIAYEVINE-I-DLSFLITAVGVVNLRDTLERALGYDY 155 (307)
T ss_pred cCccc----ccHHHHHHHHHHHHhc---CCCceEEEEECHHHHHHHHHhcC-C-CCCEEEEcCCcccHHHHHHHhhhccc
Confidence 33221 1379999999999876 34689999999999998776664 3 389999999999965432210
Q ss_pred -CCCCChh-hhccc-CCCC-ChhHHHHHHh------cCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCC
Q 004866 618 -ILPLIAA-DYEEF-GYPG-DIDDFHAIRN------YSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIY 687 (726)
Q Consensus 618 -~~~~~~~-~~~~~-g~~~-~~~~~~~~~~------~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~ 687 (726)
.+|+... ....+ |.+. ....+....+ .+|+..+++ ++.|.|+|||..|+.||+.++.+++++++...
T Consensus 156 ~~~p~~~lp~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~-l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~-- 232 (307)
T PRK13604 156 LSLPIDELPEDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKG-LDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQ-- 232 (307)
T ss_pred ccCcccccccccccccccccHHHHHHHHHhcCccccccHHHHHhh-cCCCEEEEEcCCCCccCHHHHHHHHHHhccCC--
Confidence 0111000 00001 1111 0112222222 345566775 78999999999999999999999999987533
Q ss_pred CCCCcEEEEcCCCCCCCc
Q 004866 688 DPKRPILLNLTTDIVEEN 705 (726)
Q Consensus 688 ~~~~~~~~~~~~gH~~~~ 705 (726)
..+.++++++|.+..
T Consensus 233 ---kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 233 ---CKLYSLIGSSHDLGE 247 (307)
T ss_pred ---cEEEEeCCCccccCc
Confidence 223338999997654
No 12
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.83 E-value=7.7e-19 Score=189.49 Aligned_cols=242 Identities=13% Similarity=0.046 Sum_probs=159.5
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcc
Q 004866 462 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 541 (726)
Q Consensus 462 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 541 (726)
.+..+.+.++..||..|+++++.|+. +++.|+||+. ||.++.....|......|+++||+|+.+|+||+|.... +
T Consensus 165 ~~~~e~v~i~~~~g~~l~g~l~~P~~---~~~~P~Vli~-gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~-~ 239 (414)
T PRK05077 165 PGELKELEFPIPGGGPITGFLHLPKG---DGPFPTVLVC-GGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSK-W 239 (414)
T ss_pred CCceEEEEEEcCCCcEEEEEEEECCC---CCCccEEEEe-CCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCC-C
Confidence 34678999999999899999998873 3567887765 45554333446667788999999999999999987532 1
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc--cCCCC
Q 004866 542 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--LYPIL 619 (726)
Q Consensus 542 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~--~~~~~ 619 (726)
. ..........+++++|.+.+.+|++||+++|+|+||++++.++..+|++++++|+.+|+++..... .....
T Consensus 240 ~------~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~ 313 (414)
T PRK05077 240 K------LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQV 313 (414)
T ss_pred C------ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhc
Confidence 0 011122233578899999999999999999999999999999988899999999999987522100 00111
Q ss_pred CCC-h-hhhcccCCCC-C-hhHHHHHHhcCccc--ccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcE
Q 004866 620 PLI-A-ADYEEFGYPG-D-IDDFHAIRNYSPYD--NIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPI 693 (726)
Q Consensus 620 ~~~-~-~~~~~~g~~~-~-~~~~~~~~~~sp~~--~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 693 (726)
|.. . .....+|.+. + ......+..++.-. .+.++++.|+|+|+|..|..||+.++..+.+..... +.+
T Consensus 314 p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~~------~l~ 387 (414)
T PRK05077 314 PEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSADG------KLL 387 (414)
T ss_pred hHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCCC------eEE
Confidence 110 0 0011234332 1 12223333443221 122237899999999999999999999877655432 233
Q ss_pred EEEcCCCCCCCchhhHHHHHHHHHHHHHHhhc
Q 004866 694 LLNLTTDIVEENRYLQCKESALETAFLIKMME 725 (726)
Q Consensus 694 ~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 725 (726)
. .+++.| . ....+....+.+||.++|.
T Consensus 388 ~-i~~~~~-~---e~~~~~~~~i~~wL~~~l~ 414 (414)
T PRK05077 388 E-IPFKPV-Y---RNFDKALQEISDWLEDRLC 414 (414)
T ss_pred E-ccCCCc-c---CCHHHHHHHHHHHHHHHhC
Confidence 3 466533 2 2334445567899998873
No 13
>PLN02442 S-formylglutathione hydrolase
Probab=99.81 E-value=2.5e-18 Score=176.84 Aligned_cols=247 Identities=14% Similarity=0.073 Sum_probs=154.3
Q ss_pred CceEEEEEEEC-CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchH-HHHHHHHCCcEEEEEccCCCC----
Q 004866 462 FYSCEQYDVPS-HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS-ELKSLLDRGWVVAFADVRGGG---- 535 (726)
Q Consensus 462 ~~~~~~~~~~s-~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~RG~g---- 535 (726)
....+.+++.| .-|..+++.+++|+. ..++++|+|+++||..+......... ..+.+...|++|++||..++|
T Consensus 15 ~~~~~~~~~~s~~l~~~~~~~vy~P~~-~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~ 93 (283)
T PLN02442 15 GGFNRRYKHFSSTLGCSMTFSVYFPPA-SDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVE 93 (283)
T ss_pred CCEEEEEEEeccccCCceEEEEEcCCc-ccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCC
Confidence 34566666666 457789999999984 34568999999999766432111112 234555679999999986554
Q ss_pred --------CCCCccccc-ccccCCCCc-----HHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEE
Q 004866 536 --------GGGKKWHHD-GRRTKKLNS-----IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAV 601 (726)
Q Consensus 536 --------~~g~~~~~~-~~~~~~~~~-----~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~ 601 (726)
++|..|+.. ....++... .+++...++... ..+|++|++|+|+||||++++.++.++|++|+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~ 171 (283)
T PLN02442 94 GEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNF--DQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSV 171 (283)
T ss_pred CCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHH--HhcCCCceEEEEEChhHHHHHHHHHhCchhEEEE
Confidence 122222211 111111111 223322332222 2368899999999999999999999999999999
Q ss_pred EEeCCcccccccccCCCCCCChh-hhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChH-HHHHHHH
Q 004866 602 VLEVPFLDATNTLLYPILPLIAA-DYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVW-EAAKWVA 679 (726)
Q Consensus 602 v~~~p~~d~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~-~~~~~~~ 679 (726)
++.+|++|+... +.... .-..+|.+. +..+.+...+|+.++.. .+.|+++++|+.|..|+.. ++..|++
T Consensus 172 ~~~~~~~~~~~~------~~~~~~~~~~~g~~~--~~~~~~d~~~~~~~~~~-~~~pvli~~G~~D~~v~~~~~s~~~~~ 242 (283)
T PLN02442 172 SAFAPIANPINC------PWGQKAFTNYLGSDK--ADWEEYDATELVSKFND-VSATILIDQGEADKFLKEQLLPENFEE 242 (283)
T ss_pred EEECCccCcccC------chhhHHHHHHcCCCh--hhHHHcChhhhhhhccc-cCCCEEEEECCCCccccccccHHHHHH
Confidence 999999885421 11111 111244432 23333444455556654 6789999999999999974 6899999
Q ss_pred HHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHhhcC
Q 004866 680 RVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMMES 726 (726)
Q Consensus 680 ~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~~ 726 (726)
++++++.+ ....++++++|.+.. ......+.+.|..+++.|
T Consensus 243 ~l~~~g~~---~~~~~~pg~~H~~~~---~~~~i~~~~~~~~~~~~~ 283 (283)
T PLN02442 243 ACKEAGAP---VTLRLQPGYDHSYFF---IATFIDDHINHHAQALKS 283 (283)
T ss_pred HHHHcCCC---eEEEEeCCCCccHHH---HHHHHHHHHHHHHHHhcC
Confidence 99998853 112227899996432 111222445777666654
No 14
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.81 E-value=3.6e-18 Score=180.99 Aligned_cols=253 Identities=13% Similarity=0.071 Sum_probs=161.1
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCc
Q 004866 461 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 540 (726)
Q Consensus 461 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 540 (726)
...+.+...+.+.||.+|++..+.|.+. ..+.|+||++||..... ...|......|+++||.|+.+|+||+|.+...
T Consensus 28 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~--~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~ 104 (330)
T PLN02298 28 KGIKGSKSFFTSPRGLSLFTRSWLPSSS--SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALDLEGHGRSEGL 104 (330)
T ss_pred cCCccccceEEcCCCCEEEEEEEecCCC--CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEecCCCCCCCCCc
Confidence 3455667788899999999987776542 13468999999974332 22345556778899999999999999976421
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCC---
Q 004866 541 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYP--- 617 (726)
Q Consensus 541 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~--- 617 (726)
.+.........+|+.+++++|......+..+++|+|+||||.+++.++.++|++++++|+.+|+.++...+...
T Consensus 105 ---~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 181 (330)
T PLN02298 105 ---RAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPI 181 (330)
T ss_pred ---cccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHH
Confidence 01001112346788888888876543445689999999999999999999999999999999976543211000
Q ss_pred ---------CCCCCh-hhhcc-cCCCCChhHHHHHHhcCcc----------------------cccccCCCCCeEEEEec
Q 004866 618 ---------ILPLIA-ADYEE-FGYPGDIDDFHAIRNYSPY----------------------DNIQKDVLYPAVLVTSS 664 (726)
Q Consensus 618 ---------~~~~~~-~~~~~-~g~~~~~~~~~~~~~~sp~----------------------~~i~~~~~~P~lli~g~ 664 (726)
..+... ..... ............+...+|. ..+.. ++.|+|++||.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~ 260 (330)
T PLN02298 182 PQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKD-VSIPFIVLHGS 260 (330)
T ss_pred HHHHHHHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhh-cCCCEEEEecC
Confidence 000000 00000 0000000000111111111 22333 78999999999
Q ss_pred CCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc--hhh-HHHHHHHHHHHHHHhhc
Q 004866 665 FNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN--RYL-QCKESALETAFLIKMME 725 (726)
Q Consensus 665 ~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~-~~~~~~~~~~fl~~~l~ 725 (726)
.|..||+.++.++++++...++ .+.+++++||.... ... .......+.+||.++++
T Consensus 261 ~D~ivp~~~~~~l~~~i~~~~~-----~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 261 ADVVTDPDVSRALYEEAKSEDK-----TIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred CCCCCCHHHHHHHHHHhccCCc-----eEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998875432 23337899997542 222 22334567899998875
No 15
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.81 E-value=8.2e-19 Score=181.24 Aligned_cols=246 Identities=18% Similarity=0.175 Sum_probs=157.9
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCc
Q 004866 461 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 540 (726)
Q Consensus 461 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 540 (726)
....+..+.|.+.+|..|.++++.|++. +++.|+||.+||..+.. ..+ .....++.+||+|+.+|.||.|+....
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~--~~~~Pavv~~hGyg~~~--~~~-~~~~~~a~~G~~vl~~d~rGqg~~~~d 126 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA--KGKLPAVVQFHGYGGRS--GDP-FDLLPWAAAGYAVLAMDVRGQGGRSPD 126 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S--SSSEEEEEEE--TT--G--GGH-HHHHHHHHTT-EEEEE--TTTSSSS-B
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC--CCCcCEEEEecCCCCCC--CCc-ccccccccCCeEEEEecCCCCCCCCCC
Confidence 4678889999999999999999999853 47899999999754331 112 233568899999999999999954333
Q ss_pred cccc------ccccCCC----------CcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEe
Q 004866 541 WHHD------GRRTKKL----------NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE 604 (726)
Q Consensus 541 ~~~~------~~~~~~~----------~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 604 (726)
.... +....+. ..+.|.+.++++|.+++.+|++||+++|.|.||.++++++.-. ++++++++.
T Consensus 127 ~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd-~rv~~~~~~ 205 (320)
T PF05448_consen 127 YRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALD-PRVKAAAAD 205 (320)
T ss_dssp -SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHS-ST-SEEEEE
T ss_pred ccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhC-ccccEEEec
Confidence 2211 1111111 2468999999999999999999999999999999999999975 468999999
Q ss_pred CCcc-ccccccc-CC-CCCCCh-hhhcccCCC--C-ChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHH
Q 004866 605 VPFL-DATNTLL-YP-ILPLIA-ADYEEFGYP--G-DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKW 677 (726)
Q Consensus 605 ~p~~-d~~~~~~-~~-~~~~~~-~~~~~~g~~--~-~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~ 677 (726)
+|++ |....+. .. ..+... ..|..+.++ . .++.++.+.-++..+.++. ++.|+++-.|-.|+.|||......
T Consensus 206 vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~r-i~~pvl~~~gl~D~~cPP~t~fA~ 284 (320)
T PF05448_consen 206 VPFLCDFRRALELRADEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARR-IKCPVLFSVGLQDPVCPPSTQFAA 284 (320)
T ss_dssp SESSSSHHHHHHHT--STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG---SEEEEEEETT-SSS-HHHHHHH
T ss_pred CCCccchhhhhhcCCccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHH-cCCCEEEEEecCCCCCCchhHHHH
Confidence 9965 4332211 11 122211 122222222 2 2345566666677776665 999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHh
Q 004866 678 VARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 723 (726)
Q Consensus 678 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 723 (726)
+++|... +.+.+++..||.... .......+.||.+|
T Consensus 285 yN~i~~~------K~l~vyp~~~He~~~----~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 285 YNAIPGP------KELVVYPEYGHEYGP----EFQEDKQLNFLKEH 320 (320)
T ss_dssp HCC--SS------EEEEEETT--SSTTH----HHHHHHHHHHHHH-
T ss_pred HhccCCC------eeEEeccCcCCCchh----hHHHHHHHHHHhcC
Confidence 9999754 244448999996432 12234567888875
No 16
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.80 E-value=9.4e-18 Score=172.28 Aligned_cols=242 Identities=14% Similarity=0.100 Sum_probs=152.8
Q ss_pred ceEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEEcc--CCCCCCC
Q 004866 463 YSCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADV--RGGGGGG 538 (726)
Q Consensus 463 ~~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~--RG~g~~g 538 (726)
.+.+.+.+.+. -|.++++.++.|++.. .++.|+|+++||..+......+....+.|++ .|++|++||. ||++..|
T Consensus 11 ~~~~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 11 GTQGFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred CEEEEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 45555666654 5677889999998643 3468999999997654322222233445554 6999999997 7766433
Q ss_pred --Ccc--------ccccc-ccC--CCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEe
Q 004866 539 --KKW--------HHDGR-RTK--KLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE 604 (726)
Q Consensus 539 --~~~--------~~~~~-~~~--~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 604 (726)
..| +-... ..+ .......+...+..++++ --+|++|++|+|+||||++++.++.++|++|+++++.
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~ 169 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAF 169 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEE
Confidence 122 21100 001 111233344555555554 3378899999999999999999999999999999999
Q ss_pred CCcccccccccCCCCCCChhhhc-ccCCCCChhHHHHHHhcCccccccc-CCCCCeEEEEecCCCCcCh-HHHHHHHHHH
Q 004866 605 VPFLDATNTLLYPILPLIAADYE-EFGYPGDIDDFHAIRNYSPYDNIQK-DVLYPAVLVTSSFNTRFGV-WEAAKWVARV 681 (726)
Q Consensus 605 ~p~~d~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~sp~~~i~~-~~~~P~lli~g~~D~~V~~-~~~~~~~~~L 681 (726)
+|+++... .+....... .++.+.. .+..++|...+.. ....|+++++|+.|+.|+. .++.++.++|
T Consensus 170 ~~~~~~~~------~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l 238 (275)
T TIGR02821 170 APIVAPSR------CPWGQKAFSAYLGADEA-----AWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQAC 238 (275)
T ss_pred CCccCccc------CcchHHHHHHHhccccc-----chhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHH
Confidence 99987532 111111111 1233221 1234555544432 1345666668889999999 6899999999
Q ss_pred HhcCCCCCCCcEEE--EcCCCCCCCchhhHHHHHHHHHHHHHHhh
Q 004866 682 RESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMM 724 (726)
Q Consensus 682 ~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 724 (726)
++++++ +.+ +++++|++.... ......+.|..+++
T Consensus 239 ~~~g~~-----v~~~~~~g~~H~f~~~~---~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 239 RAAGQA-----LTLRRQAGYDHSYYFIA---SFIADHLRHHAERL 275 (275)
T ss_pred HHcCCC-----eEEEEeCCCCccchhHH---HhHHHHHHHHHhhC
Confidence 999853 333 899999874422 23344567776553
No 17
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.78 E-value=6.9e-18 Score=160.22 Aligned_cols=230 Identities=17% Similarity=0.174 Sum_probs=163.0
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGK 539 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~ 539 (726)
....++-.++|++.+|.+|.+|++.|+.. +++.|+||+.||=.+.. .+-.....|+..||+|+.+|.||.|++..
T Consensus 51 ~~~ve~ydvTf~g~~g~rI~gwlvlP~~~--~~~~P~vV~fhGY~g~~---g~~~~~l~wa~~Gyavf~MdvRGQg~~~~ 125 (321)
T COG3458 51 LPRVEVYDVTFTGYGGARIKGWLVLPRHE--KGKLPAVVQFHGYGGRG---GEWHDMLHWAVAGYAVFVMDVRGQGSSSQ 125 (321)
T ss_pred CCceEEEEEEEeccCCceEEEEEEeeccc--CCccceEEEEeeccCCC---CCccccccccccceeEEEEecccCCCccc
Confidence 34678889999999999999999999853 37899999999732221 13345567889999999999999997732
Q ss_pred ------------cccccccccC-----CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEE
Q 004866 540 ------------KWHHDGRRTK-----KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVV 602 (726)
Q Consensus 540 ------------~~~~~~~~~~-----~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v 602 (726)
.|+-.|..+. ....+.|...+++-+.+...+|++||++.|+|.||.++++++.- ..++++++
T Consensus 126 dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal-~~rik~~~ 204 (321)
T COG3458 126 DTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL-DPRIKAVV 204 (321)
T ss_pred cCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc-Chhhhccc
Confidence 1111111111 13468999999999999999999999999999999999999986 56789999
Q ss_pred EeCCcccccccccCCCCCCChhhhcc------cCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHH
Q 004866 603 LEVPFLDATNTLLYPILPLIAADYEE------FGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAK 676 (726)
Q Consensus 603 ~~~p~~d~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~ 676 (726)
+.+|++.-...... + .+...|.| .-.|.+.+.++.+.-++-. |+..+++.|+|+..|-.|+.|||.-...
T Consensus 205 ~~~Pfl~df~r~i~--~-~~~~~ydei~~y~k~h~~~e~~v~~TL~yfD~~-n~A~RiK~pvL~svgL~D~vcpPstqFA 280 (321)
T COG3458 205 ADYPFLSDFPRAIE--L-ATEGPYDEIQTYFKRHDPKEAEVFETLSYFDIV-NLAARIKVPVLMSVGLMDPVCPPSTQFA 280 (321)
T ss_pred ccccccccchhhee--e-cccCcHHHHHHHHHhcCchHHHHHHHHhhhhhh-hHHHhhccceEEeecccCCCCCChhhHH
Confidence 99998753322111 1 11112222 1233333344444333333 4444599999999999999999999888
Q ss_pred HHHHHHhcCCCCCCCcEEEEcCCCCCCCc
Q 004866 677 WVARVRESTIYDPKRPILLNLTTDIVEEN 705 (726)
Q Consensus 677 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 705 (726)
.+++|...+ .+.+|+.-+|....
T Consensus 281 ~yN~l~~~K------~i~iy~~~aHe~~p 303 (321)
T COG3458 281 AYNALTTSK------TIEIYPYFAHEGGP 303 (321)
T ss_pred HhhcccCCc------eEEEeeccccccCc
Confidence 898887643 45556666686543
No 18
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.77 E-value=4.9e-18 Score=157.09 Aligned_cols=211 Identities=16% Similarity=0.103 Sum_probs=152.8
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 573 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 573 (726)
.-.||++||-.|.. ........+|.++||.|.+|++||||.....+...+..+| ++|+.++.++|.++++ +
T Consensus 15 ~~AVLllHGFTGt~--~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW----~~~v~d~Y~~L~~~gy---~ 85 (243)
T COG1647 15 NRAVLLLHGFTGTP--RDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDW----WEDVEDGYRDLKEAGY---D 85 (243)
T ss_pred CEEEEEEeccCCCc--HHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHH----HHHHHHHHHHHHHcCC---C
Confidence 36899999876644 4567788899999999999999999998888777666654 7899999999999998 6
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc-cCCCCCCChhhhcccCCCCChhHHHHHHhcC--cc---
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL-LYPILPLIAADYEEFGYPGDIDDFHAIRNYS--PY--- 647 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~s--p~--- 647 (726)
.|+|.|.||||.+++.++.++| .+++|..++.++..+.- ....+-.....+..+..+..+..-+.|+++. |.
T Consensus 86 eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~ 163 (243)
T COG1647 86 EIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTT 163 (243)
T ss_pred eEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHH
Confidence 8999999999999999999988 56777666655543210 0000000011222333333222233444544 22
Q ss_pred -----------cccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHH
Q 004866 648 -----------DNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALE 716 (726)
Q Consensus 648 -----------~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~ 716 (726)
.++.. |..|+++++|..|+.||.+.+..++..+..-.+ .+..+.+.||-.....++-...+.+
T Consensus 164 ~~~~~~i~~~~~~~~~-I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~K-----eL~~~e~SgHVIt~D~Erd~v~e~V 237 (243)
T COG1647 164 AQLKKLIKDARRSLDK-IYSPTLVVQGRQDEMVPAESANFIYDHVESDDK-----ELKWLEGSGHVITLDKERDQVEEDV 237 (243)
T ss_pred HHHHHHHHHHHhhhhh-cccchhheecccCCCCCHHHHHHHHHhccCCcc-----eeEEEccCCceeecchhHHHHHHHH
Confidence 34554 889999999999999999999999999887542 3333799999776656667777788
Q ss_pred HHHHH
Q 004866 717 TAFLI 721 (726)
Q Consensus 717 ~~fl~ 721 (726)
+.||.
T Consensus 238 ~~FL~ 242 (243)
T COG1647 238 ITFLE 242 (243)
T ss_pred HHHhh
Confidence 99986
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.76 E-value=6.7e-17 Score=172.40 Aligned_cols=250 Identities=12% Similarity=0.048 Sum_probs=154.9
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcc
Q 004866 462 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 541 (726)
Q Consensus 462 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 541 (726)
.+..+...+.+.||.+|.+..+.|++. .+.|+||++||..+.. ...|......|+++||.|+.+|+||+|.+....
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~~---~~~~~iv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~ 133 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPENS---RPKAAVCFCHGYGDTC-TFFFEGIARKIASSGYGVFAMDYPGFGLSEGLH 133 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCCC---CCCeEEEEECCCCCcc-chHHHHHHHHHHhCCCEEEEecCCCCCCCCCCC
Confidence 344555667778999999888887642 3468999999964432 223456678888899999999999999764210
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCC----
Q 004866 542 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYP---- 617 (726)
Q Consensus 542 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~---- 617 (726)
+.........+|+.+.++++..+...+..++.++||||||.+++.++.++|++++++|+.+|+..........
T Consensus 134 ---~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~ 210 (349)
T PLN02385 134 ---GYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVL 210 (349)
T ss_pred ---CCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHH
Confidence 0000111224555555555544333445689999999999999999999999999999999875432100000
Q ss_pred --------CCCCC----hhhhcc--cCCC-----------------CChhHHHHHHhcCc-ccccccCCCCCeEEEEecC
Q 004866 618 --------ILPLI----AADYEE--FGYP-----------------GDIDDFHAIRNYSP-YDNIQKDVLYPAVLVTSSF 665 (726)
Q Consensus 618 --------~~~~~----~~~~~~--~g~~-----------------~~~~~~~~~~~~sp-~~~i~~~~~~P~lli~g~~ 665 (726)
..|.. ...... +..+ ......+.+..... ...+.+ ++.|+|+|+|+.
T Consensus 211 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~-i~~P~Lii~G~~ 289 (349)
T PLN02385 211 QILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEE-VSLPLLILHGEA 289 (349)
T ss_pred HHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhccc-CCCCEEEEEeCC
Confidence 00000 000000 0000 00001111111111 123344 789999999999
Q ss_pred CCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc--hhh-HHHHHHHHHHHHHHhh
Q 004866 666 NTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN--RYL-QCKESALETAFLIKMM 724 (726)
Q Consensus 666 D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~-~~~~~~~~~~fl~~~l 724 (726)
|..||+..+.++++++...++ .+.+++++||.... ... .......+++||.+++
T Consensus 290 D~vv~~~~~~~l~~~~~~~~~-----~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 290 DKVTDPSVSKFLYEKASSSDK-----KLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred CCccChHHHHHHHHHcCCCCc-----eEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhc
Confidence 999999999999988864331 23337999997542 222 3335567789999875
No 20
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.76 E-value=2.1e-16 Score=173.38 Aligned_cols=278 Identities=12% Similarity=0.046 Sum_probs=187.9
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHhhcccCCCCCCeeECCeEEEEEecCCcceEEEEEEecCCccccccCCCCCCCcccC
Q 004866 20 EEKYAEAVMSDTERLQSKLQSEMASRLAFELSTPPLRWGPWLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFT 99 (726)
Q Consensus 20 en~~~~~~l~~~~~l~~~l~~e~~~~~~~~~~s~p~~~g~~~yy~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 99 (726)
|+.++++++... +.+++|.++|...+-+...+.|...+..++|.+..++.....+|......
T Consensus 118 ~~~~~~~~~~~~-~~~~~~a~~~~~~i~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g----------------- 179 (417)
T TIGR02800 118 LQLLGKQYTVTA-SQLRRVAHRIADAIYEKLTGERGAFSTRIAYVSKSGKSRRYELQVADYDG----------------- 179 (417)
T ss_pred EEeeeeeEEcCH-HHHHHHHHHHHHHHHHHhcCCCCCcCCEEEEEEEeCCCCcceEEEEcCCC-----------------
Confidence 455666666554 66667777777666666677888888888888776544456666654321
Q ss_pred CCCCCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCC
Q 004866 100 SGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDG 178 (726)
Q Consensus 100 ~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg 178 (726)
...+.|++.+. .+..++|||||++|||+....+ ..+|+++|+++|+...+.. ......+.|+|||
T Consensus 180 ---~~~~~l~~~~~---------~~~~p~~Spdg~~la~~~~~~~--~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg 245 (417)
T TIGR02800 180 ---ANPQTITRSRE---------PILSPAWSPDGQKLAYVSFESG--KPEIYVQDLATGQREKVASFPGMNGAPAFSPDG 245 (417)
T ss_pred ---CCCEEeecCCC---------ceecccCCCCCCEEEEEEcCCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCC
Confidence 34566776541 2345679999999999875544 3679999999997665443 3345568999999
Q ss_pred CEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEee
Q 004866 179 QALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIW 258 (726)
Q Consensus 179 ~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 258 (726)
+.|+|+.... ...+||+++++++....+... . .....+.|+|||++|++.+.......||++|+.+ ++.+.+.
T Consensus 246 ~~l~~~~~~~--~~~~i~~~d~~~~~~~~l~~~-~--~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~--~~~~~l~ 318 (417)
T TIGR02800 246 SKLAVSLSKD--GNPDIYVMDLDGKQLTRLTNG-P--GIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADG--GEVRRLT 318 (417)
T ss_pred CEEEEEECCC--CCccEEEEECCCCCEEECCCC-C--CCCCCEEECCCCCEEEEEECCCCCceEEEEECCC--CCEEEee
Confidence 9999985432 235899999988763333211 1 1123468999999999998877777999999987 4455565
Q ss_pred ccCC-ceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCC
Q 004866 259 ECEG-LAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGR 337 (726)
Q Consensus 259 ~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g 337 (726)
.... .....++++|+.+++.+...+ .++|+.++++ . . +..++.......-..+...++.|++....+|
T Consensus 319 ~~~~~~~~~~~spdg~~i~~~~~~~~------~~~i~~~d~~-~---~-~~~~l~~~~~~~~p~~spdg~~l~~~~~~~~ 387 (417)
T TIGR02800 319 FRGGYNASPSWSPDGDLIAFVHREGG------GFNIAVMDLD-G---G-GERVLTDTGLDESPSFAPNGRMILYATTRGG 387 (417)
T ss_pred cCCCCccCeEECCCCCEEEEEEccCC------ceEEEEEeCC-C---C-CeEEccCCCCCCCceECCCCCEEEEEEeCCC
Confidence 4332 234567889998888776432 4778999886 2 2 3334333222211246666788999998888
Q ss_pred eeEEEEEecC
Q 004866 338 TYRLCSVSLP 347 (726)
Q Consensus 338 ~~~l~~~~l~ 347 (726)
...+++++.+
T Consensus 388 ~~~l~~~~~~ 397 (417)
T TIGR02800 388 RGVLGLVSTD 397 (417)
T ss_pred cEEEEEEECC
Confidence 8888888764
No 21
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.75 E-value=1.7e-16 Score=182.22 Aligned_cols=256 Identities=14% Similarity=0.080 Sum_probs=175.1
Q ss_pred CCCceEEEEEEEC-----CCCc--EEEEEEEEcCCCCCCCCccEEE----EEcCCCC-------CCC------C------
Q 004866 460 SEFYSCEQYDVPS-----HDGI--SVPLTIIYSPKYKKENQNPGLL----HGHGAYG-------ELL------D------ 509 (726)
Q Consensus 460 ~~~~~~~~~~~~s-----~dG~--~i~~~l~~p~~~~~~~~~P~vl----~~hGg~~-------~~~------~------ 509 (726)
......|.|++.+ .||+ .|.+.|+.|+....+-|.|+|+ |..|.-. ..+ .
T Consensus 165 ~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~~~~~ 244 (767)
T PRK05371 165 TSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKETASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPPRAQF 244 (767)
T ss_pred cccceEEEEEEeCCCCCCCCCCcceEEEEEECCCccCCCCccceEEecCccccCCCCcccccccccCCccccccCCcccc
Confidence 5667788999976 3675 6899999998765455889988 3344200 000 0
Q ss_pred ----------------cc-----chHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHc-
Q 004866 510 ----------------KR-----WRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK- 567 (726)
Q Consensus 510 ----------------~~-----~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~- 567 (726)
.. -....++|+.+||+|++.|.||.++++..|.. .+..+.+|..++|+||..+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~-----~~~~E~~D~~~vIeWl~~~~ 319 (767)
T PRK05371 245 TPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTT-----GDYQEIESMKAVIDWLNGRA 319 (767)
T ss_pred ccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCcc-----CCHHHHHHHHHHHHHHhhCC
Confidence 00 11345889999999999999999988766543 2356889999999999853
Q ss_pred -CCCC------------CCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCC---CC-----hh--
Q 004866 568 -EIVK------------EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILP---LI-----AA-- 624 (726)
Q Consensus 568 -~~~d------------~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~---~~-----~~-- 624 (726)
+++| .+|||++|.||||+++.++|+..|+.++|+|+.+++.++...+...... .. ..
T Consensus 320 ~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l 399 (767)
T PRK05371 320 TAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVL 399 (767)
T ss_pred ccccccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhH
Confidence 2223 4899999999999999999998889999999999998876533221110 00 00
Q ss_pred ---hhcc---cCC----CC----------------ChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHH
Q 004866 625 ---DYEE---FGY----PG----------------DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWV 678 (726)
Q Consensus 625 ---~~~~---~g~----~~----------------~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~ 678 (726)
.+.. .|. +. ....-+.+.+.+++.++.+ ++.|+|++||-.|.+|++.++.+++
T Consensus 400 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~k-IkvPvLlIhGw~D~~V~~~~s~~ly 478 (767)
T PRK05371 400 AELTYSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADK-IKASVLVVHGLNDWNVKPKQVYQWW 478 (767)
T ss_pred HHHhhhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhC-CCCCEEEEeeCCCCCCChHHHHHHH
Confidence 0000 000 00 0001123455677777776 9999999999999999999999999
Q ss_pred HHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHhhc
Q 004866 679 ARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 725 (726)
Q Consensus 679 ~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 725 (726)
++|++++++ ..++ ...++|+........+....+.+||.++|.
T Consensus 479 ~aL~~~g~p---kkL~-l~~g~H~~~~~~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 479 DALPENGVP---KKLF-LHQGGHVYPNNWQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred HHHHhcCCC---eEEE-EeCCCccCCCchhHHHHHHHHHHHHHhccc
Confidence 999998754 2233 346689654433444555667899998873
No 22
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.75 E-value=1.8e-16 Score=157.13 Aligned_cols=215 Identities=17% Similarity=0.203 Sum_probs=160.4
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccc----
Q 004866 467 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWH---- 542 (726)
Q Consensus 467 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~---- 542 (726)
.+.+++.| .++++++.+|++. ++.|+||.+|+-+|. .+......+.|+++||+|++||+-+..+......
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~~---~~~P~VIv~hei~Gl--~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~ 77 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAGA---GGFPGVIVLHEIFGL--NPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPA 77 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCcC---CCCCEEEEEecccCC--chHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHH
Confidence 46688877 7899999999863 334999999998884 3566778899999999999999865332222111
Q ss_pred --ccc--cccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCC
Q 004866 543 --HDG--RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPI 618 (726)
Q Consensus 543 --~~~--~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~ 618 (726)
..+ ..........|+.++++||.+++.++++||+++|.|+||.+++.++.+.| .++|+++..|..-..
T Consensus 78 ~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~------- 149 (236)
T COG0412 78 ELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIAD------- 149 (236)
T ss_pred HHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCC-------
Confidence 111 00111457899999999999999899999999999999999999999766 789999877632110
Q ss_pred CCCChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcC
Q 004866 619 LPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLT 698 (726)
Q Consensus 619 ~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 698 (726)
.+. ... +++.|+|++.++.|..+|.....++.+++.++++. ..+.+|++
T Consensus 150 ------------~~~---------------~~~-~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~---~~~~~y~g 198 (236)
T COG0412 150 ------------DTA---------------DAP-KIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVK---VDLEIYPG 198 (236)
T ss_pred ------------ccc---------------ccc-cccCcEEEEecccCCCCChhHHHHHHHHHHhcCCC---eeEEEeCC
Confidence 000 022 37889999999999999999999999999998643 23344888
Q ss_pred CCCCCCc----------hhhHHHHHHHHHHHHHHhhcC
Q 004866 699 TDIVEEN----------RYLQCKESALETAFLIKMMES 726 (726)
Q Consensus 699 ~gH~~~~----------~~~~~~~~~~~~~fl~~~l~~ 726 (726)
+.|++.. .......+.++++||.++|+.
T Consensus 199 a~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~~ 236 (236)
T COG0412 199 AGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLGA 236 (236)
T ss_pred CccccccCCCcccccCCHHHHHHHHHHHHHHHHHhccC
Confidence 9998763 122344577889999998864
No 23
>PRK10162 acetyl esterase; Provisional
Probab=99.74 E-value=3.5e-16 Score=163.75 Aligned_cols=231 Identities=14% Similarity=0.099 Sum_probs=154.7
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-CCccchHHHHHHHH-CCcEEEEEccCCCCCCCCc
Q 004866 463 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKK 540 (726)
Q Consensus 463 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~-~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~ 540 (726)
...+.+.+++.+| .|++.+++|.. .+.|+||++|||.... ....+......|+. .|+.|+.+|||...+.
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~--- 126 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEA--- 126 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCC---
Confidence 4578888998888 59999998853 2359999999975432 22345666777887 5999999999987652
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHc---CCCCCCcEEEEEecccHHHHHHHHHcC------CCceeEEEEeCCccccc
Q 004866 541 WHHDGRRTKKLNSIKDFISCARFLIEK---EIVKEHKLAGWGYSAGGLLVAAAINCC------PDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 541 ~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~ 611 (726)
..+..++|+.++++|+.++ -.+|++||+|+|+|+||.+++.++.+. +.+++++|+.+|++|+.
T Consensus 127 --------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~ 198 (318)
T PRK10162 127 --------RFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLR 198 (318)
T ss_pred --------CCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCC
Confidence 2335789999999999864 236899999999999999999888642 35789999999998853
Q ss_pred ccccCCCCCCChhhhcccCCC---CChhHHHHHH---------hcCccc-----ccccCCCCCeEEEEecCCCCcChHHH
Q 004866 612 NTLLYPILPLIAADYEEFGYP---GDIDDFHAIR---------NYSPYD-----NIQKDVLYPAVLVTSSFNTRFGVWEA 674 (726)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~g~~---~~~~~~~~~~---------~~sp~~-----~i~~~~~~P~lli~g~~D~~V~~~~~ 674 (726)
.. .. ...++.. ...+..+.+. ..+|+. ++.. .-.|+++++|+.|..+ .++
T Consensus 199 ~~---~s-------~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~-~lPp~~i~~g~~D~L~--de~ 265 (318)
T PRK10162 199 DS---VS-------RRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTR-DVPPCFIAGAEFDPLL--DDS 265 (318)
T ss_pred CC---hh-------HHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhc-CCCCeEEEecCCCcCc--ChH
Confidence 21 00 0001100 0001111110 123331 1211 2357788888899765 489
Q ss_pred HHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc----hhhHHHHHHHHHHHHHHhhc
Q 004866 675 AKWVARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKMME 725 (726)
Q Consensus 675 ~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~~l~ 725 (726)
..|+++|+++|++ ..+..+++..|++.. -....+....+.+||.++|.
T Consensus 266 ~~~~~~L~~aGv~---v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 266 RLLYQTLAAHQQP---CEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred HHHHHHHHHcCCC---EEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 9999999999964 122228999998643 12233445566789988874
No 24
>PHA02857 monoglyceride lipase; Provisional
Probab=99.74 E-value=2e-16 Score=163.24 Aligned_cols=236 Identities=14% Similarity=0.089 Sum_probs=151.0
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccC
Q 004866 470 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 549 (726)
Q Consensus 470 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 549 (726)
+.+.||.+|++.++.|.+ .+.|+|+++||.... ...|...+..|+++||.|+++|+||+|.+.... .....
T Consensus 5 ~~~~~g~~l~~~~~~~~~----~~~~~v~llHG~~~~--~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~---~~~~~ 75 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPIT----YPKALVFISHGAGEH--SGRYEELAENISSLGILVFSHDHIGHGRSNGEK---MMIDD 75 (276)
T ss_pred eecCCCCEEEEEeccCCC----CCCEEEEEeCCCccc--cchHHHHHHHHHhCCCEEEEccCCCCCCCCCcc---CCcCC
Confidence 446699999998887742 345889999996543 346778889999999999999999999763211 00111
Q ss_pred CCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccc------------ccCC
Q 004866 550 KLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT------------LLYP 617 (726)
Q Consensus 550 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~------------~~~~ 617 (726)
....++|+...++++.+. ....+++++|+|+||.+++.++.++|++++++|+.+|..+.... +...
T Consensus 76 ~~~~~~d~~~~l~~~~~~--~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~ 153 (276)
T PHA02857 76 FGVYVRDVVQHVVTIKST--YPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYP 153 (276)
T ss_pred HHHHHHHHHHHHHHHHhh--CCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCC
Confidence 112356666777666543 22368999999999999999999999999999999997653210 0000
Q ss_pred C-CC--CChhh--------hcccCCCC------ChhHHHHHHhcC-c-ccccccCCCCCeEEEEecCCCCcChHHHHHHH
Q 004866 618 I-LP--LIAAD--------YEEFGYPG------DIDDFHAIRNYS-P-YDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWV 678 (726)
Q Consensus 618 ~-~~--~~~~~--------~~~~g~~~------~~~~~~~~~~~s-p-~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~ 678 (726)
. .. +.... .....+|. .......+...+ . ...+.+ ++.|+|+++|+.|..||+..+.++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvliv~G~~D~i~~~~~~~~l~ 232 (276)
T PHA02857 154 NKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPK-IKTPILILQGTNNEISDVSGAYYFM 232 (276)
T ss_pred CCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhccc-CCCCEEEEecCCCCcCChHHHHHHH
Confidence 0 00 00000 00001110 000000011110 1 123444 7899999999999999999999998
Q ss_pred HHHHhcCCCCCCCcEEEEcCCCCCCCc-h-hhHHHHHHHHHHHHHHh
Q 004866 679 ARVRESTIYDPKRPILLNLTTDIVEEN-R-YLQCKESALETAFLIKM 723 (726)
Q Consensus 679 ~~L~~~~~~~~~~~~~~~~~~gH~~~~-~-~~~~~~~~~~~~fl~~~ 723 (726)
+.+.. ++ .+.+++++||.... . ..+.+..++.++||.++
T Consensus 233 ~~~~~-~~-----~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 233 QHANC-NR-----EIKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred HHccC-Cc-----eEEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 88754 21 22237999997654 2 33566777889999876
No 25
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.74 E-value=1.5e-15 Score=165.05 Aligned_cols=210 Identities=7% Similarity=-0.051 Sum_probs=140.1
Q ss_pred eceeeCCCCCE--EEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEE--E
Q 004866 125 ELSEVSPDHKF--LAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS--I 199 (726)
Q Consensus 125 ~~~~~SPDG~~--la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~--~ 199 (726)
..++|||||+. ++|++.+.| ..+||++++++|+..+++. .+....+.|||||+.|+|+..... ..++|.+ +
T Consensus 188 ~sP~wSPDG~~~~~~y~S~~~g--~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g--~~di~~~~~~ 263 (428)
T PRK01029 188 ITPTWMHIGSGFPYLYVSYKLG--VPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYG--NPDLFIQSFS 263 (428)
T ss_pred ccceEccCCCceEEEEEEccCC--CceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCC--CcceeEEEee
Confidence 46899999998 556777665 4689999999998877765 445567999999999999864322 2356665 4
Q ss_pred cCCC--CceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEE
Q 004866 200 IGST--DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLY 276 (726)
Q Consensus 200 l~t~--~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~ 276 (726)
+.++ ...+.+.... ......+.|||||++|++.+...+..+||++++....+..+.++.... .....++|||+.|+
T Consensus 264 ~~~g~~g~~~~lt~~~-~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~La 342 (428)
T PRK01029 264 LETGAIGKPRRLLNEA-FGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIA 342 (428)
T ss_pred cccCCCCcceEeecCC-CCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEE
Confidence 4432 1222232221 111235789999999999987776788999998643344556654432 23567899999999
Q ss_pred EEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCC
Q 004866 277 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 349 (726)
Q Consensus 277 ~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 349 (726)
|.+...+ ..+|+.++++ . ++.+.+........-..++..++.|++....+|...|++++++++
T Consensus 343 f~~~~~g------~~~I~v~dl~-~---g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g 405 (428)
T PRK01029 343 FCSVIKG------VRQICVYDLA-T---GRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITK 405 (428)
T ss_pred EEEcCCC------CcEEEEEECC-C---CCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCC
Confidence 9887543 3568888876 2 334444322111112234455678888887778889999998754
No 26
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.73 E-value=1.9e-17 Score=164.34 Aligned_cols=204 Identities=15% Similarity=0.122 Sum_probs=135.1
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCC-CCCcccccccc--c----CC
Q 004866 478 VPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGG-GGKKWHHDGRR--T----KK 550 (726)
Q Consensus 478 i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~-~g~~~~~~~~~--~----~~ 550 (726)
|.+++..|++. ++.|.||.+|+.+|.. +........|+++||.|++||+-++.. ......+.... . ..
T Consensus 1 ~~ay~~~P~~~---~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (218)
T PF01738_consen 1 IDAYVARPEGG---GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRP 75 (218)
T ss_dssp EEEEEEEETTS---SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSH
T ss_pred CeEEEEeCCCC---CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhH
Confidence 56889999863 6789999999988854 445566789999999999999865554 11111110000 0 01
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccC
Q 004866 551 LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFG 630 (726)
Q Consensus 551 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g 630 (726)
.....|+.+++++|.+++.++.+||+++|.|+||.+++.++.+. +.++|+|+..|...
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~--------------------- 133 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSP--------------------- 133 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSS---------------------
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCC---------------------
Confidence 23467888999999999888999999999999999999988875 67899998887000
Q ss_pred CCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc-h-h-
Q 004866 631 YPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-R-Y- 707 (726)
Q Consensus 631 ~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~-~- 707 (726)
+. .+.....+ ++.|+++++|+.|+.++.++..++.++|++++++ ..+.+|++++|++.. . .
T Consensus 134 -~~-----------~~~~~~~~-~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~---~~~~~y~ga~HgF~~~~~~~ 197 (218)
T PF01738_consen 134 -PP-----------PPLEDAPK-IKAPVLILFGENDPFFPPEEVEALEEALKAAGVD---VEVHVYPGAGHGFANPSRPP 197 (218)
T ss_dssp -GG-----------GHHHHGGG---S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTT---EEEEEETT--TTTTSTTSTT
T ss_pred -CC-----------cchhhhcc-cCCCEeecCccCCCCCChHHHHHHHHHHHhcCCc---EEEEECCCCcccccCCCCcc
Confidence 00 00111233 6789999999999999999999999999998853 122229999999865 1 1
Q ss_pred ----hHHHHHHHHHHHHHHhh
Q 004866 708 ----LQCKESALETAFLIKMM 724 (726)
Q Consensus 708 ----~~~~~~~~~~~fl~~~l 724 (726)
...+.+.+.++||.++|
T Consensus 198 ~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 198 YDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp --HHHHHHHHHHHHHHHCC--
T ss_pred cCHHHHHHHHHHHHHHHHhcC
Confidence 22344667789998886
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=99.73 E-value=8.4e-16 Score=162.45 Aligned_cols=247 Identities=13% Similarity=0.147 Sum_probs=151.2
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccc
Q 004866 466 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG 545 (726)
Q Consensus 466 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 545 (726)
+..++...||.++.+....|. .+.|+||++||..+.. ..|...+..|+++||.|+++|+||+|.++.......
T Consensus 31 ~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~--~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 103 (330)
T PRK10749 31 EEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESY--VKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPH 103 (330)
T ss_pred cceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchH--HHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCC
Confidence 445677789999887665443 2346899999964422 346667778899999999999999998754321111
Q ss_pred cccCCCCcHHHHHHHHHHHHHc--CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc---------
Q 004866 546 RRTKKLNSIKDFISCARFLIEK--EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--------- 614 (726)
Q Consensus 546 ~~~~~~~~~~D~~~~~~~l~~~--~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~--------- 614 (726)
.+ ....++++.+.+..+++. ...+..++.++||||||.+++.++.++|++++++|+.+|........
T Consensus 104 ~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~ 181 (330)
T PRK10749 104 RG--HVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRIL 181 (330)
T ss_pred cC--ccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHH
Confidence 11 113455555555444432 11245789999999999999999999999999999999875421000
Q ss_pred --c--CCCCCCC-hhhhccc-CCC-------CChhH----HHHHHhcCc----------------------ccccccCCC
Q 004866 615 --L--YPILPLI-AADYEEF-GYP-------GDIDD----FHAIRNYSP----------------------YDNIQKDVL 655 (726)
Q Consensus 615 --~--~~~~~~~-~~~~~~~-g~~-------~~~~~----~~~~~~~sp----------------------~~~i~~~~~ 655 (726)
. ....... ......+ ..+ ..++. .+.+. .+| ...+.+ ++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~ 259 (330)
T PRK10749 182 NWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYA-DDPELRVGGPTYHWVRESILAGEQVLAGAGD-IT 259 (330)
T ss_pred HHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHH-hCCCcccCCCcHHHHHHHHHHHHHHHhhccC-CC
Confidence 0 0000000 0000000 000 00111 01111 111 123344 78
Q ss_pred CCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc--hhhHHHHHHHHHHHHHHh
Q 004866 656 YPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN--RYLQCKESALETAFLIKM 723 (726)
Q Consensus 656 ~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~fl~~~ 723 (726)
.|+|+|+|+.|..|++..+.+++++++.++.......+.+++++||.... ...+......+.+||.++
T Consensus 260 ~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 260 TPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred CCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999876532111223338999997443 223555566778999765
No 28
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.72 E-value=1.4e-16 Score=157.07 Aligned_cols=192 Identities=11% Similarity=0.064 Sum_probs=126.0
Q ss_pred EEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHH-HCCcEEEEEccCCCCCCCCc--ccccccccCCCCcHHH
Q 004866 480 LTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLL-DRGWVVAFADVRGGGGGGKK--WHHDGRRTKKLNSIKD 556 (726)
Q Consensus 480 ~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~v~~~d~RG~g~~g~~--~~~~~~~~~~~~~~~D 556 (726)
++++.|++. +++.|+||++||+.+.............++ +.||+|+.||+||++..+.. |........+.....|
T Consensus 1 ~~ly~P~~~--~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (212)
T TIGR01840 1 MYVYVPAGL--TGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVES 78 (212)
T ss_pred CEEEcCCCC--CCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHH
Confidence 367788764 367899999999766432111111133344 47999999999998755443 3433222233457888
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChh
Q 004866 557 FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDID 636 (726)
Q Consensus 557 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 636 (726)
+...++++.++..+|++||+|+|+|+||++++.++.++|++|+++++.++..-.... .... .......+....
T Consensus 79 ~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~----~~~~---~~~~~~~~~~~~ 151 (212)
T TIGR01840 79 LHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEAS----SSIS---ATPQMCTAATAA 151 (212)
T ss_pred HHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccc----cchh---hHhhcCCCCCHH
Confidence 999999999887789999999999999999999999999999999888775421110 0000 011111112111
Q ss_pred H-HHHHHhcCcccccccCCCCCe-EEEEecCCCCcChHHHHHHHHHHHhc
Q 004866 637 D-FHAIRNYSPYDNIQKDVLYPA-VLVTSSFNTRFGVWEAAKWVARVRES 684 (726)
Q Consensus 637 ~-~~~~~~~sp~~~i~~~~~~P~-lli~g~~D~~V~~~~~~~~~~~L~~~ 684 (726)
. .+.+.... .... ...|+ +++||..|..||+..+.+++++|++.
T Consensus 152 ~~~~~~~~~~--~~~~--~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 152 SVCRLVRGMQ--SEYN--GPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHhccC--Cccc--CCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 1 12222211 1111 23454 58899999999999999999999987
No 29
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.72 E-value=4.2e-15 Score=162.90 Aligned_cols=204 Identities=12% Similarity=0.069 Sum_probs=145.1
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||++|||+....| ..+||++|+.+|+...++. ......+.|||||+.|+|+.... ...+||++++.+
T Consensus 220 ~~~p~wSPDG~~La~~s~~~g--~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~--g~~~Iy~~dl~t 295 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFENR--KAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKD--GQPEIYVVDIAT 295 (448)
T ss_pred ccCceECCCCCEEEEEEecCC--CcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCC--CCeEEEEEECCC
Confidence 456789999999999987554 4689999999998766654 33446789999999999985432 345899999987
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeecc-CCceEEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-~~~~~~~~~~~g~~l~~~t~~ 281 (726)
++...+... ......+.|||||++|++.+......+||++|+++ ++.+.++.. .......+++||+.+++.+..
T Consensus 296 g~~~~lt~~---~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~--g~~~~Lt~~g~~~~~~~~SpDG~~l~~~~~~ 370 (448)
T PRK04792 296 KALTRITRH---RAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLAS--GKVSRLTFEGEQNLGGSITPDGRSMIMVNRT 370 (448)
T ss_pred CCeEECccC---CCCccceEECCCCCEEEEEECCCCCceEEEEECCC--CCEEEEecCCCCCcCeeECCCCCEEEEEEec
Confidence 763333221 11224578999999999998877778999999987 445555422 222335678999999997764
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
.+ .+.|+.++++ + +..+.+.....+.. ..+++.++.|++....+|...|++++++
T Consensus 371 ~g------~~~I~~~dl~-~---g~~~~lt~~~~d~~-ps~spdG~~I~~~~~~~g~~~l~~~~~~ 425 (448)
T PRK04792 371 NG------KFNIARQDLE-T---GAMQVLTSTRLDES-PSVAPNGTMVIYSTTYQGKQVLAAVSID 425 (448)
T ss_pred CC------ceEEEEEECC-C---CCeEEccCCCCCCC-ceECCCCCEEEEEEecCCceEEEEEECC
Confidence 32 3778888886 2 33343332211111 2566777889998888888899999875
No 30
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=5.8e-15 Score=162.10 Aligned_cols=205 Identities=11% Similarity=0.068 Sum_probs=143.3
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||++|||+....|. .+|+++|+++|+...++. .+....+.|||||+.|+|+.... ...+||++++.+
T Consensus 204 v~~p~wSpDG~~lay~s~~~g~--~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~d~~~ 279 (435)
T PRK05137 204 VLTPRFSPNRQEITYMSYANGR--PRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQG--GNTDIYTMDLRS 279 (435)
T ss_pred eEeeEECCCCCEEEEEEecCCC--CEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecC--CCceEEEEECCC
Confidence 5678999999999999876553 689999999998776654 44556899999999999986432 345899999987
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~ 281 (726)
+....+... . .....+.|||||++|++.+.+....+||++|+++ +..+.++.... .....++|+|+.+++.+..
T Consensus 280 ~~~~~Lt~~-~--~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g--~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~ 354 (435)
T PRK05137 280 GTTTRLTDS-P--AIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADG--SNPRRISFGGGRYSTPVWSPRGDLIAFTKQG 354 (435)
T ss_pred CceEEccCC-C--CccCceeEcCCCCEEEEEECCCCCCeEEEEECCC--CCeEEeecCCCcccCeEECCCCCEEEEEEcC
Confidence 754333321 1 1223578999999999998877778999999987 45666664332 2235688999999998754
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCe---eEEEEEecCC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRT---YRLCSVSLPL 348 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~---~~l~~~~l~~ 348 (726)
.+ .++|+.++++ . +..+ ++.......-..+++.++.|++.....+. ..|++++++.
T Consensus 355 ~~------~~~i~~~d~~-~---~~~~-~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g 413 (435)
T PRK05137 355 GG------QFSIGVMKPD-G---SGER-ILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTG 413 (435)
T ss_pred CC------ceEEEEEECC-C---CceE-eccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCC
Confidence 32 3678888875 2 2223 33332221122355556788877766665 6899999864
No 31
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.71 E-value=9.2e-15 Score=157.79 Aligned_cols=209 Identities=12% Similarity=0.058 Sum_probs=147.1
Q ss_pred eceeeCCCCCE-EEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 125 ELSEVSPDHKF-LAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 125 ~~~~~SPDG~~-la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
..++|||||++ ++|++..++ ..+||++|+++|+..+++. .+....+.|||||+.|+|+.... ...+||++++.+
T Consensus 191 ~~p~wSpDG~~~i~y~s~~~~--~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~dl~~ 266 (419)
T PRK04043 191 IFPKWANKEQTAFYYTSYGER--KPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPK--GQPDIYLYDTNT 266 (419)
T ss_pred EeEEECCCCCcEEEEEEccCC--CCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccC--CCcEEEEEECCC
Confidence 35789999997 666654433 3589999999999888765 34456789999999999986542 346899999987
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCc
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAA 282 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~ 282 (726)
+....+... .. ....+.|||||+.|+|.+++....+||++|+++ ++.+.++.... ....++|||+.+++.+...
T Consensus 267 g~~~~LT~~-~~--~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~--g~~~rlt~~g~-~~~~~SPDG~~Ia~~~~~~ 340 (419)
T PRK04043 267 KTLTQITNY-PG--IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNS--GSVEQVVFHGK-NNSSVSTYKNYIVYSSRET 340 (419)
T ss_pred CcEEEcccC-CC--ccCccEECCCCCEEEEEECCCCCceEEEEECCC--CCeEeCccCCC-cCceECCCCCEEEEEEcCC
Confidence 754343322 11 223578999999999999988788999999987 45555553221 2347899999999988754
Q ss_pred ccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCC
Q 004866 283 KEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 283 ~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
........+.|+.++++ . +.++.|.... ......+++.++.|++....++...|+.++++.
T Consensus 341 ~~~~~~~~~~I~v~d~~-~---g~~~~LT~~~-~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g 401 (419)
T PRK04043 341 NNEFGKNTFNLYLISTN-S---DYIRRLTANG-VNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNY 401 (419)
T ss_pred CcccCCCCcEEEEEECC-C---CCeEECCCCC-CcCCeEECCCCCEEEEEEccCCcEEEEEEecCC
Confidence 21100113688999886 2 4456554332 222345677788899988888888999999864
No 32
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.69 E-value=2.1e-15 Score=147.20 Aligned_cols=248 Identities=14% Similarity=0.059 Sum_probs=163.0
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccc
Q 004866 463 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWH 542 (726)
Q Consensus 463 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 542 (726)
.......+.+.+|..+-.-...|.... .+.-+|+++||..+ .....|...+..|+..||.|+..|++|+|.+...
T Consensus 25 ~~~~~~~~~n~rG~~lft~~W~p~~~~--~pr~lv~~~HG~g~-~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl-- 99 (313)
T KOG1455|consen 25 VTYSESFFTNPRGAKLFTQSWLPLSGT--EPRGLVFLCHGYGE-HSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGL-- 99 (313)
T ss_pred cceeeeeEEcCCCCEeEEEecccCCCC--CCceEEEEEcCCcc-cchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCC--
Confidence 334455678899999887777775422 44567888897533 3335677788999999999999999999976311
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCC-----
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYP----- 617 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~----- 617 (726)
.+.-.....-++|+..-++....+.---....+++|+||||.+++.++.++|+.+.++|+.+|++-+...+..+
T Consensus 100 -~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 100 -HAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred -cccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH
Confidence 01111112234555555555444443344678999999999999999999999999999999987654322110
Q ss_pred -------CCCCCh-hhhcccCCC--CChhHHHHHHhcCcc----------------------cccccCCCCCeEEEEecC
Q 004866 618 -------ILPLIA-ADYEEFGYP--GDIDDFHAIRNYSPY----------------------DNIQKDVLYPAVLVTSSF 665 (726)
Q Consensus 618 -------~~~~~~-~~~~~~g~~--~~~~~~~~~~~~sp~----------------------~~i~~~~~~P~lli~g~~ 665 (726)
-+|... ........+ .+++. ......+|+ .++.+ +..|.|++||+.
T Consensus 179 ~l~~l~~liP~wk~vp~~d~~~~~~kdp~~-r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~-vtvPflilHG~d 256 (313)
T KOG1455|consen 179 ILTLLSKLIPTWKIVPTKDIIDVAFKDPEK-RKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNE-VTVPFLILHGTD 256 (313)
T ss_pred HHHHHHHhCCceeecCCccccccccCCHHH-HHHhhcCCceecCCccHHHHHHHHHHHHHHHHhccc-ccccEEEEecCC
Confidence 000000 000000000 12222 122223333 34444 889999999999
Q ss_pred CCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCC---chhhHHHHHHHHHHHHHHh
Q 004866 666 NTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEE---NRYLQCKESALETAFLIKM 723 (726)
Q Consensus 666 D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~---~~~~~~~~~~~~~~fl~~~ 723 (726)
|..+.+.-+.++++....+. +.+-+||+.=|... ..++......++.+||.++
T Consensus 257 D~VTDp~~Sk~Lye~A~S~D-----KTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 257 DKVTDPKVSKELYEKASSSD-----KTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CcccCcHHHHHHHHhccCCC-----CceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 99999999999999988765 34445899999743 3567777788999999875
No 33
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.69 E-value=5.4e-15 Score=158.27 Aligned_cols=245 Identities=14% Similarity=0.035 Sum_probs=153.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHH 543 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 543 (726)
......+...+|..+.+.++.|.. ..+.|+||++||..+.. ..|...+..|+++||.|+.+|+||+|.+...+.
T Consensus 109 ~~~~~~~~~~~~~~l~~~~~~p~~---~~~~~~Vl~lHG~~~~~--~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~- 182 (395)
T PLN02652 109 RWATSLFYGARRNALFCRSWAPAA---GEMRGILIIIHGLNEHS--GRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHG- 182 (395)
T ss_pred eEEEEEEECCCCCEEEEEEecCCC---CCCceEEEEECCchHHH--HHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCC-
Confidence 345566788899999988888753 23457999999975532 346677888999999999999999997643311
Q ss_pred cccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCC---ceeEEEEeCCcccccccc------
Q 004866 544 DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLEVPFLDATNTL------ 614 (726)
Q Consensus 544 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~p~~d~~~~~------ 614 (726)
.........+|+.++++++..+ .+..++.|+||||||.+++.++. +|+ +++++|+.+|..++....
T Consensus 183 --~~~~~~~~~~Dl~~~l~~l~~~--~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~ 257 (395)
T PLN02652 183 --YVPSLDYVVEDTEAFLEKIRSE--NPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAV 257 (395)
T ss_pred --CCcCHHHHHHHHHHHHHHHHHh--CCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHH
Confidence 0001112346777777777643 12347999999999999987765 564 789999999986543210
Q ss_pred ------cCCCCCC----------Ch--hh-hcccCCCCC-------hhHHHHHHhcC-cccccccCCCCCeEEEEecCCC
Q 004866 615 ------LYPILPL----------IA--AD-YEEFGYPGD-------IDDFHAIRNYS-PYDNIQKDVLYPAVLVTSSFNT 667 (726)
Q Consensus 615 ------~~~~~~~----------~~--~~-~~~~g~~~~-------~~~~~~~~~~s-p~~~i~~~~~~P~lli~g~~D~ 667 (726)
..+.... .. .. ...+.+|.. ....+.+.... ...++.+ ++.|+|++||..|.
T Consensus 258 ~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~-I~vPvLIi~G~~D~ 336 (395)
T PLN02652 258 APIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKS-VTVPFMVLHGTADR 336 (395)
T ss_pred HHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhccc-CCCCEEEEEeCCCC
Confidence 0000000 00 00 000001100 00000000000 0123344 78999999999999
Q ss_pred CcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHhhc
Q 004866 668 RFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKMME 725 (726)
Q Consensus 668 ~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~l~ 725 (726)
.||+.++.++++++....+ .+.++++++|.........+..+.+.+||..+++
T Consensus 337 vvp~~~a~~l~~~~~~~~k-----~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 337 VTDPLASQDLYNEAASRHK-----DIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred CCCHHHHHHHHHhcCCCCc-----eEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9999999999998765432 2333799999743323345556677899998763
No 34
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.68 E-value=2.7e-14 Score=157.06 Aligned_cols=205 Identities=15% Similarity=0.089 Sum_probs=145.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||++|||+....+ ..+|+++|+++|+...++. .+....+.|||||+.|+|+.... ...+||++++.+
T Consensus 201 ~~~p~wSpDG~~la~~s~~~~--~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~--g~~~Iy~~d~~~ 276 (430)
T PRK00178 201 ILSPRWSPDGKRIAYVSFEQK--RPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKD--GNPEIYVMDLAS 276 (430)
T ss_pred eeeeeECCCCCEEEEEEcCCC--CCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccC--CCceEEEEECCC
Confidence 456789999999999876544 4679999999998776654 33455799999999999986432 236899999988
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~ 281 (726)
+....+. .. ......+.|||||+.|++.+.+....+||++|+.+ ++.+.++... ......++++|+.+++.+..
T Consensus 277 ~~~~~lt-~~--~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~--g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~ 351 (430)
T PRK00178 277 RQLSRVT-NH--PAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNG--GRAERVTFVGNYNARPRLSADGKTLVMVHRQ 351 (430)
T ss_pred CCeEEcc-cC--CCCcCCeEECCCCCEEEEEECCCCCceEEEEECCC--CCEEEeecCCCCccceEECCCCCEEEEEEcc
Confidence 7533332 21 11223578999999999998877778999999987 4455554322 12234678999999998765
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
.+ .+.|+.+++. . +..+.+.....+. -..+++.++.+++....+|...|+.++++.
T Consensus 352 ~~------~~~l~~~dl~-t---g~~~~lt~~~~~~-~p~~spdg~~i~~~~~~~g~~~l~~~~~~g 407 (430)
T PRK00178 352 DG------NFHVAAQDLQ-R---GSVRILTDTSLDE-SPSVAPNGTMLIYATRQQGRGVLMLVSING 407 (430)
T ss_pred CC------ceEEEEEECC-C---CCEEEccCCCCCC-CceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 43 3679999886 2 3344443221222 225666778888888888889999998753
No 35
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.67 E-value=4.7e-14 Score=154.05 Aligned_cols=205 Identities=13% Similarity=0.075 Sum_probs=143.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||++|||++...| ..+|+++|+.+|+...++. ......+.|||||+.|+|+.... ...+||++++.+
T Consensus 201 ~~~p~wSPDG~~la~~s~~~g--~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~--g~~~I~~~d~~t 276 (429)
T PRK03629 201 LMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKT--GSLNLYVMDLAS 276 (429)
T ss_pred eeeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCC--CCcEEEEEECCC
Confidence 567899999999999876544 3679999999998776654 34456799999999999985432 234799999987
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~ 281 (726)
+....+... . .....+.|||||++|++.+.+....+||.+|+++ +..+.++.... .....+++||+.+++.+..
T Consensus 277 g~~~~lt~~-~--~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~--g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~ 351 (429)
T PRK03629 277 GQIRQVTDG-R--SNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNING--GAPQRITWEGSQNQDADVSSDGKFMVMVSSN 351 (429)
T ss_pred CCEEEccCC-C--CCcCceEECCCCCEEEEEeCCCCCceEEEEECCC--CCeEEeecCCCCccCEEECCCCCEEEEEEcc
Confidence 754333321 1 1234689999999999999877678999999987 34555543322 2235678999999988765
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
.+ ...|+.++++ . +.++.+... ....-..+++.++.|++...+++...|++++++.
T Consensus 352 ~g------~~~I~~~dl~-~---g~~~~Lt~~-~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G 407 (429)
T PRK03629 352 GG------QQHIAKQDLA-T---GGVQVLTDT-FLDETPSIAPNGTMVIYSSSQGMGSVLNLVSTDG 407 (429)
T ss_pred CC------CceEEEEECC-C---CCeEEeCCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECCC
Confidence 43 2568888876 2 344544322 1111234566677888888777777889888753
No 36
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=4e-15 Score=142.55 Aligned_cols=211 Identities=18% Similarity=0.194 Sum_probs=152.7
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEEccCCCCCCCCccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWH 542 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~ 542 (726)
..+.+..+++.|..+-+..+.|+. ...++++|.||--. ..+ .-......|.. -++.|+..||+|.|.++..-.
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~----~~~~~lly~hGNa~-Dlg-q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ps 107 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPE----AAHPTLLYSHGNAA-DLG-QMVELFKELSIFLNCNVVSYDYSGYGRSSGKPS 107 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCcc----ccceEEEEcCCccc-chH-HHHHHHHHHhhcccceEEEEecccccccCCCcc
Confidence 455666777888787776666653 24689999998621 111 11122233333 489999999999997654432
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCC
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLI 622 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~ 622 (726)
+ .+..+|+.++.+||.+..- .+++|+++|+|+|...+..+|.+.| .+|+|+.+|+.+....+... . ..
T Consensus 108 E-------~n~y~Di~avye~Lr~~~g-~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~rv~~~~-~-~~ 175 (258)
T KOG1552|consen 108 E-------RNLYADIKAVYEWLRNRYG-SPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMRVAFPD-T-KT 175 (258)
T ss_pred c-------ccchhhHHHHHHHHHhhcC-CCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhhhhccC-c-ce
Confidence 2 2789999999999998755 7899999999999999999999988 79999999999877654321 1 11
Q ss_pred hhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCC
Q 004866 623 AADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIV 702 (726)
Q Consensus 623 ~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 702 (726)
..+.+.| +-+..++. +++|+|++||..|++|+..++.+++++.++.- .|++ ..++||.
T Consensus 176 ~~~~d~f---------------~~i~kI~~-i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~-----epl~-v~g~gH~ 233 (258)
T KOG1552|consen 176 TYCFDAF---------------PNIEKISK-ITCPVLIIHGTDDEVVDFSHGKALYERCKEKV-----EPLW-VKGAGHN 233 (258)
T ss_pred EEeeccc---------------cccCccee-ccCCEEEEecccCceecccccHHHHHhccccC-----CCcE-EecCCCc
Confidence 1122222 22556775 89999999999999999999999999999863 4666 4899997
Q ss_pred CCc-hhhHHHHHH
Q 004866 703 EEN-RYLQCKESA 714 (726)
Q Consensus 703 ~~~-~~~~~~~~~ 714 (726)
... ....++...
T Consensus 234 ~~~~~~~yi~~l~ 246 (258)
T KOG1552|consen 234 DIELYPEYIEHLR 246 (258)
T ss_pred ccccCHHHHHHHH
Confidence 655 445555544
No 37
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=4.4e-14 Score=153.62 Aligned_cols=259 Identities=9% Similarity=0.044 Sum_probs=169.4
Q ss_pred eeeCCCCCEEEEEEeCCCCc----EEEEEEEECCCCceecccc-ccccceeEEecCCCE--EEEEEecCCCCCceEEEEE
Q 004866 127 SEVSPDHKFLAYTMYDKDND----YFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQA--LIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e----~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~--l~y~~~~~~~~~~~l~~~~ 199 (726)
..++ +++|||+....+.+ .+.||++|.++++..+++. ......+.|||||+. |+|++... ...+||+++
T Consensus 142 ~g~~--~~~iayv~~~~~~~~~~~~~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~--g~~~I~~~~ 217 (428)
T PRK01029 142 PGIS--SGKIIFSLSTTNSDTELKQGELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKL--GVPKIFLGS 217 (428)
T ss_pred Cccc--cCEEEEEEeeCCcccccccceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccC--CCceEEEEE
Confidence 3455 99999998654422 4689999999998888776 345578999999987 55675533 245899999
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE--eCCCC-CCCeEEeeccCC--ceEEeeeecCCE
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI--NAADP-FSGLTLIWECEG--LAHCIVEHHEGF 274 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~--d~~~~-~~~~~~l~~~~~--~~~~~~~~~g~~ 274 (726)
+.+++...+.. .+... ..+.|||||++|++.+...+..++|+. ++.++ .+.++.++.... ...+.++|||+.
T Consensus 218 l~~g~~~~lt~-~~g~~--~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~ 294 (428)
T PRK01029 218 LENPAGKKILA-LQGNQ--LMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTR 294 (428)
T ss_pred CCCCCceEeec-CCCCc--cceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCE
Confidence 98876444432 22222 247899999999999876666678875 55442 134556664332 235678999999
Q ss_pred EEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcc
Q 004866 275 LYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGV 354 (726)
Q Consensus 275 l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~ 354 (726)
|+|.++.++ ..+|+.++++ ..+ ...+.+........-..+++.++.|++....+|..+|+++|+.+++ .
T Consensus 295 Laf~s~~~g------~~~ly~~~~~-~~g-~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~---~ 363 (428)
T PRK01029 295 LVFVSNKDG------RPRIYIMQID-PEG-QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR---D 363 (428)
T ss_pred EEEEECCCC------CceEEEEECc-ccc-cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC---e
Confidence 999987653 2467777764 211 1123232222222233566778899998888888899999987643 1
Q ss_pred eeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEe
Q 004866 355 VHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQ 415 (726)
Q Consensus 355 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~ 415 (726)
..+. ..+.... ...+++|+..++|+... .....+|.+|+.+++.+.+..
T Consensus 364 ~~Lt-------~~~~~~~----~p~wSpDG~~L~f~~~~-~g~~~L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 364 YQLT-------TSPENKE----SPSWAIDSLHLVYSAGN-SNESELYLISLITKKTRKIVI 412 (428)
T ss_pred EEcc-------CCCCCcc----ceEECCCCCEEEEEECC-CCCceEEEEECCCCCEEEeec
Confidence 1111 0111111 23356788888776554 345789999999988877764
No 38
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=4.2e-14 Score=154.57 Aligned_cols=204 Identities=14% Similarity=0.084 Sum_probs=143.6
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||++|||+....+ ..+|+++|+.+|+...++. .+....+.|||||+.|+|+.... ...+||.+++.+
T Consensus 198 v~~p~wSPDG~~la~~s~~~~--~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~--g~~~Iy~~d~~~ 273 (427)
T PRK02889 198 IISPAWSPDGTKLAYVSFESK--KPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRD--GNSQIYTVNADG 273 (427)
T ss_pred cccceEcCCCCEEEEEEccCC--CcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccC--CCceEEEEECCC
Confidence 456789999999999876544 4679999999998776653 44556799999999999975432 346899999876
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~ 281 (726)
+....+.. .. .....+.|||||++|++.+++....+||.+++.+ +..+.++... ......+++||+.+++.++.
T Consensus 274 ~~~~~lt~--~~-~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~--g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~ 348 (427)
T PRK02889 274 SGLRRLTQ--SS-GIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASG--GAAQRVTFTGSYNTSPRISPDGKLLAYISRV 348 (427)
T ss_pred CCcEECCC--CC-CCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCC--CceEEEecCCCCcCceEECCCCCEEEEEEcc
Confidence 65333321 11 1223578999999999988777778999999877 3455554322 12345688999999988875
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
++ .+.|+.+++. . +..+.+.....+ .-..++..++.|++....+|...|+.++++
T Consensus 349 ~g------~~~I~v~d~~-~---g~~~~lt~~~~~-~~p~~spdg~~l~~~~~~~g~~~l~~~~~~ 403 (427)
T PRK02889 349 GG------AFKLYVQDLA-T---GQVTALTDTTRD-ESPSFAPNGRYILYATQQGGRSVLAAVSSD 403 (427)
T ss_pred CC------cEEEEEEECC-C---CCeEEccCCCCc-cCceECCCCCEEEEEEecCCCEEEEEEECC
Confidence 43 3678888876 2 333444322211 122456667889998888898899999875
No 39
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.66 E-value=6.5e-15 Score=151.62 Aligned_cols=243 Identities=17% Similarity=0.155 Sum_probs=160.1
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
..+..+.+.||..+.+..+.+... +..+||.+||..... ..|...+..|..+||.|+..|.||+|.+.+
T Consensus 9 ~~~~~~~~~d~~~~~~~~~~~~~~----~~g~Vvl~HG~~Eh~--~ry~~la~~l~~~G~~V~~~D~RGhG~S~r----- 77 (298)
T COG2267 9 RTEGYFTGADGTRLRYRTWAAPEP----PKGVVVLVHGLGEHS--GRYEELADDLAARGFDVYALDLRGHGRSPR----- 77 (298)
T ss_pred cccceeecCCCceEEEEeecCCCC----CCcEEEEecCchHHH--HHHHHHHHHHHhCCCEEEEecCCCCCCCCC-----
Confidence 344567889999998877765532 226899999975533 446677899999999999999999998754
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCC--CCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc---cc-----
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEI--VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN---TL----- 614 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~--~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~---~~----- 614 (726)
........|+|+++.++.+++.-. .-..+++++||||||.+++..+.+++..+.++|+.+|++.+.. ..
T Consensus 78 -~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~ 156 (298)
T COG2267 78 -GQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARL 156 (298)
T ss_pred -CCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHH
Confidence 111223457777777777766432 1347999999999999999999999999999999999998772 00
Q ss_pred -------cCCCCCCChh--hhcccCC-CCChhHHHHHHhcCcc----------------------cccccCCCCCeEEEE
Q 004866 615 -------LYPILPLIAA--DYEEFGY-PGDIDDFHAIRNYSPY----------------------DNIQKDVLYPAVLVT 662 (726)
Q Consensus 615 -------~~~~~~~~~~--~~~~~g~-~~~~~~~~~~~~~sp~----------------------~~i~~~~~~P~lli~ 662 (726)
..+.++.... +...... ..+++..+.+.+ +|+ ..-...++.|+||++
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~-dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~ 235 (298)
T COG2267 157 ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEA-DPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQ 235 (298)
T ss_pred hcccccccccccccCcccccCcCcchhhcCHHHHHHHhc-CCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEe
Confidence 0011111110 0000000 012222222222 221 111123789999999
Q ss_pred ecCCCCcC-hHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhH--HHHHHHHHHHHHHhhc
Q 004866 663 SSFNTRFG-VWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQ--CKESALETAFLIKMME 725 (726)
Q Consensus 663 g~~D~~V~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~--~~~~~~~~~fl~~~l~ 725 (726)
|+.|..|+ ...+.++++++....+ .+.+++++-|..-...+. .+.+.+..+||.+++.
T Consensus 236 g~~D~vv~~~~~~~~~~~~~~~~~~-----~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 236 GGDDRVVDNVEGLARFFERAGSPDK-----ELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred cCCCccccCcHHHHHHHHhcCCCCc-----eEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 99999999 6777778777765432 233379999975442333 5667778899998764
No 40
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=6e-14 Score=151.48 Aligned_cols=246 Identities=14% Similarity=0.079 Sum_probs=168.3
Q ss_pred CEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCE-EEEEEecCCCCCceEEEEEcCCCCceeEEeee
Q 004866 134 KFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQA-LIYVVTDQNKRPYQIYCSIIGSTDEDALLLEE 212 (726)
Q Consensus 134 ~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~-l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~ 212 (726)
.++||.+...|...++|+++|.++.....++.......+.|||||+. ++|+.... +..+||++++.+++...+. ..
T Consensus 155 ~r~~~v~~~~~~~~~~l~~~d~dg~~~~~~~~~~~~~~p~wSpDG~~~i~y~s~~~--~~~~Iyv~dl~tg~~~~lt-~~ 231 (419)
T PRK04043 155 KRKVVFSKYTGPKKSNIVLADYTLTYQKVIVKGGLNIFPKWANKEQTAFYYTSYGE--RKPTLYKYNLYTGKKEKIA-SS 231 (419)
T ss_pred eeEEEEEEccCCCcceEEEECCCCCceeEEccCCCeEeEEECCCCCcEEEEEEccC--CCCEEEEEECCCCcEEEEe-cC
Confidence 56788776455556899999999887665554445567999999996 77776542 2348999999887644433 22
Q ss_pred cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecCcccCCCCCCe
Q 004866 213 SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDAAKEGQEADNH 291 (726)
Q Consensus 213 ~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~~~~~ 291 (726)
. . ....+.|||||+.|++........+||++|+++ +..++++.... .....++|||+.++|.+++.+ ..
T Consensus 232 ~-g-~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~--g~~~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g------~~ 301 (419)
T PRK04043 232 Q-G-MLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNT--KTLTQITNYPGIDVNGNFVEDDKRIVFVSDRLG------YP 301 (419)
T ss_pred C-C-cEEeeEECCCCCEEEEEEccCCCcEEEEEECCC--CcEEEcccCCCccCccEECCCCCEEEEEECCCC------Cc
Confidence 2 2 223478999999999998877778999999987 45677776543 455678999999999998753 36
Q ss_pred EEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeC------CeeEEEEEecCCCCCCcceeecccccccc
Q 004866 292 YLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREG------RTYRLCSVSLPLPAGKGVVHLKELHPHFL 365 (726)
Q Consensus 292 ~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~------g~~~l~~~~l~~~~~~~~~~~~~~~~~~~ 365 (726)
.|+.++++ . +..+.++... .. ...+++.++.|+++.... +...|+++++++++ ... +
T Consensus 302 ~Iy~~dl~-~---g~~~rlt~~g-~~-~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~---~~~--------L 364 (419)
T PRK04043 302 NIFMKKLN-S---GSVEQVVFHG-KN-NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDY---IRR--------L 364 (419)
T ss_pred eEEEEECC-C---CCeEeCccCC-Cc-CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCC---eEE--------C
Confidence 79999987 3 3444444322 22 236777889999888764 44689999987543 111 2
Q ss_pred cCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 366 PLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 366 ~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
.... .. ....+++|+..++|.... ..-..++.++++.+....+.
T Consensus 365 T~~~-~~---~~p~~SPDG~~I~f~~~~-~~~~~L~~~~l~g~~~~~l~ 408 (419)
T PRK04043 365 TANG-VN---QFPRFSSDGGSIMFIKYL-GNQSALGIIRLNYNKSFLFP 408 (419)
T ss_pred CCCC-Cc---CCeEECCCCCEEEEEEcc-CCcEEEEEEecCCCeeEEee
Confidence 1111 11 123457888888887544 34457999999776555554
No 41
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=5.3e-14 Score=154.54 Aligned_cols=251 Identities=9% Similarity=0.047 Sum_probs=170.9
Q ss_pred CCCEEEEEEeCCCCc--EEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeE
Q 004866 132 DHKFLAYTMYDKDND--YFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDAL 208 (726)
Q Consensus 132 DG~~la~~~~~~g~e--~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~l 208 (726)
=..+|||+.+..|.. .++|+++|.+++....++. ......+.|||||+.|+|+.... ...+||++++.++....+
T Consensus 164 f~~~iafv~~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~--g~~~i~~~dl~~g~~~~l 241 (435)
T PRK05137 164 FDTRIVYVAESGPKNKRIKRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYAN--GRPRVYLLDLETGQRELV 241 (435)
T ss_pred CCCeEEEEEeeCCCCCcceEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecC--CCCEEEEEECCCCcEEEe
Confidence 356899998766532 6789999998887776655 34667899999999999997543 236899999987753333
Q ss_pred EeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecCcccCCC
Q 004866 209 LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDAAKEGQE 287 (726)
Q Consensus 209 v~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~ 287 (726)
. .... ....+.|||||+.|++........+||++|+++ +..+.++.... .....+++||+.++|.++..+
T Consensus 242 ~-~~~g--~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~--~~~~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g---- 312 (435)
T PRK05137 242 G-NFPG--MTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS--GTTTRLTDSPAIDTSPSYSPDGSQIVFESDRSG---- 312 (435)
T ss_pred e-cCCC--cccCcEECCCCCEEEEEEecCCCceEEEEECCC--CceEEccCCCCccCceeEcCCCCEEEEEECCCC----
Confidence 2 1111 123578999999999988777778999999987 45666665433 234678899999999987653
Q ss_pred CCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccC
Q 004866 288 ADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPL 367 (726)
Q Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (726)
..+|+.++++ . +..+.+........-..+++.++.|++.....+...|++++++++. .. .+..
T Consensus 313 --~~~Iy~~d~~-g---~~~~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~---~~--------~lt~ 375 (435)
T PRK05137 313 --SPQLYVMNAD-G---SNPRRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG---ER--------ILTS 375 (435)
T ss_pred --CCeEEEEECC-C---CCeEEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc---eE--------eccC
Confidence 3568888876 2 3345554332222223466677888888777777889999975432 11 1111
Q ss_pred CCceeeeecCCCCcCCCcEEEEEEccCCCC--ceEEEEECCCCeEEEEE
Q 004866 368 PKYVSQIVPGPNYDYYSSTMRFAISSPVMP--DAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 368 p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P--~~~~~~d~~~~~~~~~~ 414 (726)
.... ....+++|+..++|+......+ ..+|.+|+.+++.+.+.
T Consensus 376 ~~~~----~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~~~l~ 420 (435)
T PRK05137 376 GFLV----EGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNEREVP 420 (435)
T ss_pred CCCC----CCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCceEEcc
Confidence 1111 1344577888888877655553 58999999887766554
No 42
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=6.9e-14 Score=153.41 Aligned_cols=205 Identities=14% Similarity=0.070 Sum_probs=143.5
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||++|||+....+ ..+|+++|+++|+...++. .+....+.|||||+.|+|+.... ...+||++++.+
T Consensus 206 v~~p~wSpDg~~la~~s~~~~--~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~--g~~~Iy~~d~~~ 281 (433)
T PRK04922 206 ILSPAWSPDGKKLAYVSFERG--RSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRD--GNPEIYVMDLGS 281 (433)
T ss_pred cccccCCCCCCEEEEEecCCC--CcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCC--CCceEEEEECCC
Confidence 557789999999999876544 4679999999998766654 33445789999999999986432 235899999987
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~ 281 (726)
+....+. .. ......+.|||||++|++.++..+..+||.+|+.+ +..+.++... ......++++|+.+++.+..
T Consensus 282 g~~~~lt-~~--~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~--g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~ 356 (433)
T PRK04922 282 RQLTRLT-NH--FGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASG--GSAERLTFQGNYNARASVSPDGKKIAMVHGS 356 (433)
T ss_pred CCeEECc-cC--CCCccceEECCCCCEEEEEECCCCCceEEEEECCC--CCeEEeecCCCCccCEEECCCCCEEEEEECC
Confidence 7533322 11 11223578999999999998877778999999987 3455555322 22345788999999998764
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
++ .+.|+.+++. + +..+.+. ......-..++..++.|++.....|...|+.++++.
T Consensus 357 ~~------~~~I~v~d~~-~---g~~~~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~~g 412 (433)
T PRK04922 357 GG------QYRIAVMDLS-T---GSVRTLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAVSTDG 412 (433)
T ss_pred CC------ceeEEEEECC-C---CCeEECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEEECCC
Confidence 32 3678888876 2 3344343 221111124566677888888888888999998853
No 43
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.63 E-value=2.3e-15 Score=154.37 Aligned_cols=202 Identities=20% Similarity=0.237 Sum_probs=132.3
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch---------HHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 474 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR---------SELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 474 dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~---------~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
||++|.+.|++| +...+++.|+||..++ |+........ .....|+++||+|+..|.||.|+++..|...
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tp-Y~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~ 78 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTP-YGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPM 78 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEES-STCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TT
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccC-cCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccC
Confidence 899999999999 4455689999998885 2321100011 1112399999999999999999998777643
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc-cccCCCC-CC-
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN-TLLYPIL-PL- 621 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~-~~~~~~~-~~- 621 (726)
..++.+|..++|+|+.++++.| .|||++|.||+|+..+.++.+.|...||++..++..|+.. ....... ..
T Consensus 79 -----~~~e~~D~~d~I~W~~~Qpws~-G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~ 152 (272)
T PF02129_consen 79 -----SPNEAQDGYDTIEWIAAQPWSN-GKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLG 152 (272)
T ss_dssp -----SHHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCC
T ss_pred -----ChhHHHHHHHHHHHHHhCCCCC-CeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCccccc
Confidence 5568999999999999998765 7999999999999999999988889999999999988876 2111111 00
Q ss_pred -Chhh-----hc-cc---CCCCC---------------------------------hhHHHHHHhcCcccccccCCCCCe
Q 004866 622 -IAAD-----YE-EF---GYPGD---------------------------------IDDFHAIRNYSPYDNIQKDVLYPA 658 (726)
Q Consensus 622 -~~~~-----~~-~~---g~~~~---------------------------------~~~~~~~~~~sp~~~i~~~~~~P~ 658 (726)
...+ .. .. ..+.. +..-+.+.+.++..++.+ ++.|+
T Consensus 153 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~-i~vP~ 231 (272)
T PF02129_consen 153 FFAGWEDLQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDK-IDVPV 231 (272)
T ss_dssp HHHHHHHHHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG---SEE
T ss_pred chhHHHHHHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhh-CCCCE
Confidence 0011 00 00 00000 000122333344444555 89999
Q ss_pred EEEEecCCCCcChHHHHHHHHHHHhcC
Q 004866 659 VLVTSSFNTRFGVWEAAKWVARVREST 685 (726)
Q Consensus 659 lli~g~~D~~V~~~~~~~~~~~L~~~~ 685 (726)
|++.|-.|.... .++.+.+++|+..+
T Consensus 232 l~v~Gw~D~~~~-~~~~~~~~~l~~~~ 257 (272)
T PF02129_consen 232 LIVGGWYDTLFL-RGALRAYEALRAPG 257 (272)
T ss_dssp EEEEETTCSSTS-HHHHHHHHHHCTTS
T ss_pred EEecccCCcccc-hHHHHHHHHhhcCC
Confidence 999999996666 89999999999876
No 44
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=8e-14 Score=152.84 Aligned_cols=160 Identities=16% Similarity=0.135 Sum_probs=118.7
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 203 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~ 203 (726)
..++|||||++|||+.+.+| ..+||++|+++++..+++. ......+.|||||++|+|+.... ...+||++++.++
T Consensus 265 ~~~~wSPDG~~La~~~~~~g--~~~Iy~~dl~tg~~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~--g~~~Iy~~dl~~g 340 (448)
T PRK04792 265 GAPRFSPDGKKLALVLSKDG--QPEIYVVDIATKALTRITRHRAIDTEPSWHPDGKSLIFTSERG--GKPQIYRVNLASG 340 (448)
T ss_pred CCeeECCCCCEEEEEEeCCC--CeEEEEEECCCCCeEECccCCCCccceEECCCCCEEEEEECCC--CCceEEEEECCCC
Confidence 35789999999999887666 4689999999998877665 33456799999999999986432 2358999999877
Q ss_pred CceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCcc
Q 004866 204 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAK 283 (726)
Q Consensus 204 ~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~ 283 (726)
+...+.+.. .+...+.|||||++|++........+||++|+++ +.++.++.........++++|+.++|.++.++
T Consensus 341 ~~~~Lt~~g---~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~--g~~~~lt~~~~d~~ps~spdG~~I~~~~~~~g 415 (448)
T PRK04792 341 KVSRLTFEG---EQNLGGSITPDGRSMIMVNRTNGKFNIARQDLET--GAMQVLTSTRLDESPSVAPNGTMVIYSTTYQG 415 (448)
T ss_pred CEEEEecCC---CCCcCeeECCCCCEEEEEEecCCceEEEEEECCC--CCeEEccCCCCCCCceECCCCCEEEEEEecCC
Confidence 644444322 2223578999999999987766667899999988 45566664433344578899999999887653
Q ss_pred cCCCCCCeEEEEeeCC
Q 004866 284 EGQEADNHYLLRCPVD 299 (726)
Q Consensus 284 ~~~~~~~~~l~~~~~~ 299 (726)
...|+.++.+
T Consensus 416 ------~~~l~~~~~~ 425 (448)
T PRK04792 416 ------KQVLAAVSID 425 (448)
T ss_pred ------ceEEEEEECC
Confidence 2457777765
No 45
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.62 E-value=1.3e-14 Score=152.17 Aligned_cols=228 Identities=23% Similarity=0.171 Sum_probs=146.7
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCC-Cccc-hHHHHHHHHCCcEEEEEccCCCCCCCCccccccccc
Q 004866 471 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRW-RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 548 (726)
Q Consensus 471 ~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~-~~~~-~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~ 548 (726)
....+..+++.++.| ......+.|+|||+|||..... ...+ ......+...|+.|+.+|||-..+.
T Consensus 57 ~~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~----------- 124 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH----------- 124 (312)
T ss_pred cCCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC-----------
Confidence 445566688888888 3234456899999999755432 2333 3334555668999999999976653
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEecccHHHHHHHHHcCCC----ceeEEEEeCCcccccccccCCCC--
Q 004866 549 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPD----LFRAVVLEVPFLDATNTLLYPIL-- 619 (726)
Q Consensus 549 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d~~~~~~~~~~-- 619 (726)
..+..++|+.+++.|+.++. -+|+++|+|+|+|+||.|++.++.+..+ ..++.++.+|.+|... . ....
T Consensus 125 ~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~-~~~~~~ 202 (312)
T COG0657 125 PFPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-S-AASLPG 202 (312)
T ss_pred CCCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-c-ccchhh
Confidence 45578999999999999874 3799999999999999999998875432 4688999999998764 1 1111
Q ss_pred -----CCChhhhc----c-c-CCCCChhHHHHHHhcCcccccc-cCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCC
Q 004866 620 -----PLIAADYE----E-F-GYPGDIDDFHAIRNYSPYDNIQ-KDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIY 687 (726)
Q Consensus 620 -----~~~~~~~~----~-~-g~~~~~~~~~~~~~~sp~~~i~-~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~ 687 (726)
.+...... . + +...+... ...+|+.... . --.|+++++++.|...+ ++..+.++|+++|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----p~~spl~~~~~~-~lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~ 275 (312)
T COG0657 203 YGEADLLDAAAILAWFADLYLGAAPDRED----PEASPLASDDLS-GLPPTLIQTAEFDPLRD--EGEAYAERLRAAGVP 275 (312)
T ss_pred cCCccccCHHHHHHHHHHHhCcCccccCC----CccCcccccccc-CCCCEEEEecCCCcchh--HHHHHHHHHHHcCCe
Confidence 01110000 0 0 11110000 1245554332 2 14566677777786666 999999999999964
Q ss_pred CCCCcEEEEcCCCCCCCc--hhhHHHHHHHHHHHHHH
Q 004866 688 DPKRPILLNLTTDIVEEN--RYLQCKESALETAFLIK 722 (726)
Q Consensus 688 ~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~fl~~ 722 (726)
..+..+++..|++.. .........++..|+..
T Consensus 276 ---~~~~~~~g~~H~f~~~~~~~a~~~~~~~~~~l~~ 309 (312)
T COG0657 276 ---VELRVYPGMIHGFDLLTGPEARSALRQIAAFLRA 309 (312)
T ss_pred ---EEEEEeCCcceeccccCcHHHHHHHHHHHHHHHH
Confidence 112228899998733 32233334455566653
No 46
>PRK11460 putative hydrolase; Provisional
Probab=99.61 E-value=3.9e-14 Score=141.22 Aligned_cols=183 Identities=15% Similarity=0.074 Sum_probs=127.3
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCC----CCCCcccccccccCCCCc-------HHHHHHH
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGG----GGGKKWHHDGRRTKKLNS-------IKDFISC 560 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g----~~g~~~~~~~~~~~~~~~-------~~D~~~~ 560 (726)
.+.|+||++||..+. ...|......|...++.+..+.+||.. ..|..|+... ....... ...+.+.
T Consensus 14 ~~~~~vIlLHG~G~~--~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~-~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 14 PAQQLLLLFHGVGDN--PVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQ-GITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCcEEEEEeCCCCC--hHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCC-CCCccchHHHHHHHHHHHHHH
Confidence 456899999986443 245677788888877666666677643 2356776421 1111111 2334556
Q ss_pred HHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHH
Q 004866 561 ARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHA 640 (726)
Q Consensus 561 ~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 640 (726)
++++.++..++++||+++|+|+||.+++.++.++|+++.++|+.+|.+. . .+..
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------~------------~~~~------ 144 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------S------------LPET------ 144 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------c------------cccc------
Confidence 6777767667889999999999999999999888998888876655211 0 0100
Q ss_pred HHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCCchhhHHHHHHHHHH
Q 004866 641 IRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETA 718 (726)
Q Consensus 641 ~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~ 718 (726)
. ..+.|++++||..|+.||++.+.+++++|++++.+ +.+ ++++||.+.. ++.....+
T Consensus 145 ----------~-~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~-----~~~~~~~~~gH~i~~-----~~~~~~~~ 203 (232)
T PRK11460 145 ----------A-PTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGD-----VTLDIVEDLGHAIDP-----RLMQFALD 203 (232)
T ss_pred ----------c-cCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCC-----eEEEEECCCCCCCCH-----HHHHHHHH
Confidence 0 13578999999999999999999999999998742 333 7999997633 45555667
Q ss_pred HHHHhh
Q 004866 719 FLIKMM 724 (726)
Q Consensus 719 fl~~~l 724 (726)
||.+.|
T Consensus 204 ~l~~~l 209 (232)
T PRK11460 204 RLRYTV 209 (232)
T ss_pred HHHHHc
Confidence 777765
No 47
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.61 E-value=2.3e-14 Score=161.65 Aligned_cols=135 Identities=16% Similarity=0.183 Sum_probs=108.1
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCC-Cccc-hHHHHHHHHCCcEEEEEccCCCCCCCCcccccccc
Q 004866 470 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELL-DKRW-RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR 547 (726)
Q Consensus 470 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~-~~~~-~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~ 547 (726)
++++||++|.+.++.|++ .++.|+||++||-..... ...+ ......|+++||+|+++|+||+|.++..+...+
T Consensus 1 i~~~DG~~L~~~~~~P~~---~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-- 75 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG---GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-- 75 (550)
T ss_pred CcCCCCCEEEEEEEecCC---CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC--
Confidence 357899999999999875 247899999996332210 0111 224568999999999999999998876543321
Q ss_pred cCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccc
Q 004866 548 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT 613 (726)
Q Consensus 548 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~ 613 (726)
....+|+.++++|+.++++.+ .||+++|+||||++++.++..+|+.++|+|+.+++.|+...
T Consensus 76 ---~~~~~D~~~~i~~l~~q~~~~-~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~~ 137 (550)
T TIGR00976 76 ---SDEAADGYDLVDWIAKQPWCD-GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYRD 137 (550)
T ss_pred ---cccchHHHHHHHHHHhCCCCC-CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhHh
Confidence 458899999999999998877 79999999999999999999899999999999999887753
No 48
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.60 E-value=6.1e-13 Score=145.31 Aligned_cols=248 Identities=11% Similarity=0.060 Sum_probs=163.9
Q ss_pred CEEEEEEeCCC-CcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEee
Q 004866 134 KFLAYTMYDKD-NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLE 211 (726)
Q Consensus 134 ~~la~~~~~~g-~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~ 211 (726)
++|||+....+ ...++|+++|.+++....++. ......+.|||||+.|+|+.... ...+||++++.+++...+. .
T Consensus 164 ~riayv~~~~~~~~~~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~--g~~~i~i~dl~~G~~~~l~-~ 240 (429)
T PRK03629 164 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFES--GRSALVIQTLANGAVRQVA-S 240 (429)
T ss_pred CeEEEEEeeCCCCcceeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecC--CCcEEEEEECCCCCeEEcc-C
Confidence 78999876543 336799999999887766654 33567899999999999986532 2358999999876533332 2
Q ss_pred ecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEEecCcccCCCCCC
Q 004866 212 ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDAAKEGQEADN 290 (726)
Q Consensus 212 ~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~~~~~~~~~~ 290 (726)
... ....+.|||||++|++........+||++|+++ ++.+.++... ......++|||+.++|.++..+ .
T Consensus 241 ~~~--~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~t--g~~~~lt~~~~~~~~~~wSPDG~~I~f~s~~~g------~ 310 (429)
T PRK03629 241 FPR--HNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS--GQIRQVTDGRSNNTEPTWFPDSQNLAYTSDQAG------R 310 (429)
T ss_pred CCC--CcCCeEECCCCCEEEEEEcCCCCcEEEEEECCC--CCEEEccCCCCCcCceEECCCCCEEEEEeCCCC------C
Confidence 111 123578999999999987766667899999987 4566666543 2345678899999999988653 2
Q ss_pred eEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCCc
Q 004866 291 HYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKY 370 (726)
Q Consensus 291 ~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~ 370 (726)
.+|+.++++ . +..+.+........-..+++.++.|++....++...|+++++.++. . ..+..+..
T Consensus 311 ~~Iy~~d~~-~---g~~~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~------~-----~~Lt~~~~ 375 (429)
T PRK03629 311 PQVYKVNIN-G---GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG------V-----QVLTDTFL 375 (429)
T ss_pred ceEEEEECC-C---CCeEEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC------e-----EEeCCCCC
Confidence 578888876 2 2334443222112223456667888888888888889999987542 1 11211111
Q ss_pred eeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 371 VSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
. ....+++|+..+++.... .....++.+++..+..+.+.
T Consensus 376 ~----~~p~~SpDG~~i~~~s~~-~~~~~l~~~~~~G~~~~~l~ 414 (429)
T PRK03629 376 D----ETPSIAPNGTMVIYSSSQ-GMGSVLNLVSTDGRFKARLP 414 (429)
T ss_pred C----CCceECCCCCEEEEEEcC-CCceEEEEEECCCCCeEECc
Confidence 1 123456788877665543 22356888888666555554
No 49
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.58 E-value=6.6e-14 Score=135.67 Aligned_cols=192 Identities=15% Similarity=0.178 Sum_probs=124.8
Q ss_pred EEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchH--HHHHHHH-CCcEEEEEccCCCCCCCC--cccccccccCCCCc
Q 004866 479 PLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRS--ELKSLLD-RGWVVAFADVRGGGGGGK--KWHHDGRRTKKLNS 553 (726)
Q Consensus 479 ~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~--~~~~l~~-~G~~v~~~d~RG~g~~g~--~~~~~~~~~~~~~~ 553 (726)
.+.|+.|++.. .++.|+||.+||+.+.. ..|.. .+..|++ +||+|+.|+-........ .|.. .....+..+
T Consensus 2 ~Y~lYvP~~~~-~~~~PLVv~LHG~~~~a--~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~-~~~~~g~~d 77 (220)
T PF10503_consen 2 SYRLYVPPGAP-RGPVPLVVVLHGCGQSA--EDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFS-DDQQRGGGD 77 (220)
T ss_pred cEEEecCCCCC-CCCCCEEEEeCCCCCCH--HHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccc-cccccCccc
Confidence 45678888653 35789999999975543 23322 3456777 699999999543322233 4444 222334456
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCC
Q 004866 554 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPG 633 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~ 633 (726)
...+.+.+++++++.-+|++||.+.|.|+||.|+..++..+||+|+|+...+++.--.. ... ........-|...
T Consensus 78 ~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a---~~~--~~a~~~m~~g~~~ 152 (220)
T PF10503_consen 78 VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCA---ASG--ASALSAMRSGPRP 152 (220)
T ss_pred hhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccc---cCc--ccHHHHhhCCCCC
Confidence 66777889999998889999999999999999999999999999999888777532111 000 0000001112222
Q ss_pred ChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhc
Q 004866 634 DIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRES 684 (726)
Q Consensus 634 ~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~ 684 (726)
.+.........++ .. ...|.+++||..|..|.+..+.++.+.+...
T Consensus 153 ~p~~~~~a~~~~g--~~---~~~P~~v~hG~~D~tV~~~n~~~~~~q~~~~ 198 (220)
T PF10503_consen 153 APAAAWGARSDAG--AY---PGYPRIVFHGTADTTVNPQNADQLVAQWLNV 198 (220)
T ss_pred ChHHHHHhhhhcc--CC---CCCCEEEEecCCCCccCcchHHHHHHHHHHc
Confidence 2211111111111 11 2368999999999999999999999888764
No 50
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.58 E-value=5.5e-14 Score=145.98 Aligned_cols=240 Identities=14% Similarity=0.152 Sum_probs=142.4
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCc
Q 004866 461 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 540 (726)
Q Consensus 461 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 540 (726)
..+..+++.++-.+ ..|++++..|++ +++.|+||++-|. .+.....+.....+|+.+|++++.+|.+|.|... .
T Consensus 161 ~~~~i~~v~iP~eg-~~I~g~LhlP~~---~~p~P~VIv~gGl-Ds~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~-~ 234 (411)
T PF06500_consen 161 SDYPIEEVEIPFEG-KTIPGYLHLPSG---EKPYPTVIVCGGL-DSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESP-K 234 (411)
T ss_dssp SSSEEEEEEEEETT-CEEEEEEEESSS---SS-EEEEEEE--T-TS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGT-T
T ss_pred CCCCcEEEEEeeCC-cEEEEEEEcCCC---CCCCCEEEEeCCc-chhHHHHHHHHHHHHHhCCCEEEEEccCCCcccc-c
Confidence 35678999998754 899999988873 4788988887553 3322222333345788999999999999999742 1
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccc-cccc-ccCCC
Q 004866 541 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD-ATNT-LLYPI 618 (726)
Q Consensus 541 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d-~~~~-~~~~~ 618 (726)
|- .....-.=..++++||.+.+++|.+||+++|.|+||+.+..++..++++++|+|+..|+++ +++. .....
T Consensus 235 ~~------l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~ 308 (411)
T PF06500_consen 235 WP------LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQR 308 (411)
T ss_dssp T-------S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTT
T ss_pred CC------CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhc
Confidence 11 0111222346789999999999999999999999999999999878899999999988654 3321 11122
Q ss_pred CCCCh--hhhcccCCCC-C-hhHHHHHHhcCcccc--c-ccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCC
Q 004866 619 LPLIA--ADYEEFGYPG-D-IDDFHAIRNYSPYDN--I-QKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKR 691 (726)
Q Consensus 619 ~~~~~--~~~~~~g~~~-~-~~~~~~~~~~sp~~~--i-~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 691 (726)
.|... ..-..+|... + ......+.++|-... + .++.++|+|.+.+..|+.+|.+++.-++ .-...| +
T Consensus 309 ~P~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~qGlL~~rr~~~plL~i~~~~D~v~P~eD~~lia-~~s~~g-----k 382 (411)
T PF06500_consen 309 VPDMYLDVLASRLGMAAVSDESLRGELNKFSLKTQGLLSGRRCPTPLLAINGEDDPVSPIEDSRLIA-ESSTDG-----K 382 (411)
T ss_dssp S-HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTTTTTTSS-BSS-EEEEEETT-SSS-HHHHHHHH-HTBTT------E
T ss_pred CCHHHHHHHHHHhCCccCCHHHHHHHHHhcCcchhccccCCCCCcceEEeecCCCCCCCHHHHHHHH-hcCCCC-----c
Confidence 33210 1112345432 2 222344566776542 2 2336788888888889998888765443 222222 2
Q ss_pred cEEEEcCCC-CCCCchhhHHHHHHHHHHHHHHhh
Q 004866 692 PILLNLTTD-IVEENRYLQCKESALETAFLIKMM 724 (726)
Q Consensus 692 ~~~~~~~~g-H~~~~~~~~~~~~~~~~~fl~~~l 724 (726)
... ++... | ....+....++.||...|
T Consensus 383 ~~~-~~~~~~~-----~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 383 ALR-IPSKPLH-----MGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp EEE-E-SSSHH-----HHHHHHHHHHHHHHHHHH
T ss_pred eee-cCCCccc-----cchHHHHHHHHHHHHHhc
Confidence 333 34333 5 334455667789999876
No 51
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.1e-12 Score=144.29 Aligned_cols=258 Identities=10% Similarity=0.101 Sum_probs=168.4
Q ss_pred EeeceeeCCCCCEEEEEEeCC--CCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDK--DNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~--g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+.+.... -.++|||+.... +.+.++|+++|.+++....++. ......+.|||||+.|+|+.... ...+||+++
T Consensus 153 ~ltg~~g~-f~~~ia~v~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~--~~~~l~~~~ 229 (430)
T PRK00178 153 KLTGIKGA-FSTRILYVTAERFSVNTRYTLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQ--KRPRIFVQN 229 (430)
T ss_pred HHhCCCcc-ceeeEEEEEeeCCCCCcceEEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCC--CCCEEEEEE
Confidence 44454433 667799986543 2457899999999887665544 34567899999999999986542 235899999
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEE
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLF 278 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~ 278 (726)
+.++.... +..... ....+.|||||++|++.....+..+||++|+++ +..+.++.... ...+.+++||+.++|.
T Consensus 230 l~~g~~~~-l~~~~g--~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~--~~~~~lt~~~~~~~~~~~spDg~~i~f~ 304 (430)
T PRK00178 230 LDTGRREQ-ITNFEG--LNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLAS--RQLSRVTNHPAIDTEPFWGKDGRTLYFT 304 (430)
T ss_pred CCCCCEEE-ccCCCC--CcCCeEECCCCCEEEEEEccCCCceEEEEECCC--CCeEEcccCCCCcCCeEECCCCCEEEEE
Confidence 98775333 222221 122478999999999988777778999999988 45566654332 3456788999999999
Q ss_pred ecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeec
Q 004866 279 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLK 358 (726)
Q Consensus 279 t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~ 358 (726)
++..+ ...|+.+++. . ++++.+...........++..++.|++..+.++...|+++|+.++. ..
T Consensus 305 s~~~g------~~~iy~~d~~-~---g~~~~lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~---~~--- 368 (430)
T PRK00178 305 SDRGG------KPQIYKVNVN-G---GRAERVTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGS---VR--- 368 (430)
T ss_pred ECCCC------CceEEEEECC-C---CCEEEeecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCC---EE---
Confidence 87654 3568888876 2 3445554332222223466677899888877777789999987542 11
Q ss_pred ccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 359 ELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 359 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
.+...... ....+++++..++|+..... -..+|.++...+..+.+.
T Consensus 369 -----~lt~~~~~----~~p~~spdg~~i~~~~~~~g-~~~l~~~~~~g~~~~~l~ 414 (430)
T PRK00178 369 -----ILTDTSLD----ESPSVAPNGTMLIYATRQQG-RGVLMLVSINGRVRLPLP 414 (430)
T ss_pred -----EccCCCCC----CCceECCCCCEEEEEEecCC-ceEEEEEECCCCceEECc
Confidence 11111110 12245678888777654322 246899998665544443
No 52
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.57 E-value=1.3e-13 Score=145.40 Aligned_cols=237 Identities=12% Similarity=0.079 Sum_probs=135.8
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCc--------------------cc----hHHHHHHHHCCcE
Q 004866 470 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK--------------------RW----RSELKSLLDRGWV 525 (726)
Q Consensus 470 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~--------------------~~----~~~~~~l~~~G~~ 525 (726)
+.+.||..|....+.|+ .+..+|+.+||-.+..... .| ...+..|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 56789999988777664 2346899999843333100 11 3457899999999
Q ss_pred EEEEccCCCCCCCCcccccccccCCCCcHHHHHH----HHHHHHHc------------------CCCCCCcEEEEEeccc
Q 004866 526 VAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFIS----CARFLIEK------------------EIVKEHKLAGWGYSAG 583 (726)
Q Consensus 526 v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l~~~------------------~~~d~~ri~i~G~S~G 583 (726)
|+.+|.||+|.+...-...+ ....++|+++ .++.+.+. .+-...++.|+|||||
T Consensus 77 V~~~D~rGHG~S~~~~~~~g----~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmG 152 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRG----HINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMG 152 (332)
T ss_pred EEEecccccCCCcccccccc----chhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCc
Confidence 99999999997542200001 1134555544 44443321 1111357999999999
Q ss_pred HHHHHHHHHcCCC--------ceeEEEEeCCcccccccc--------------------cCCCCCCCh-hhhc-------
Q 004866 584 GLLVAAAINCCPD--------LFRAVVLEVPFLDATNTL--------------------LYPILPLIA-ADYE------- 627 (726)
Q Consensus 584 G~l~~~~~~~~p~--------~f~a~v~~~p~~d~~~~~--------------------~~~~~~~~~-~~~~------- 627 (726)
|.+++.++..+++ .++++|+.+|++.+...- ..+.+.... .++.
T Consensus 153 g~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~ 232 (332)
T TIGR01607 153 GNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVND 232 (332)
T ss_pred cHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhh
Confidence 9999988765432 588999888876432100 001100000 0000
Q ss_pred cc-CCCC------ChhHHHHHHhcCc--ccccccCC--CCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEE
Q 004866 628 EF-GYPG------DIDDFHAIRNYSP--YDNIQKDV--LYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLN 696 (726)
Q Consensus 628 ~~-g~~~------~~~~~~~~~~~sp--~~~i~~~~--~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 696 (726)
.+ -+|. .......+..... ...+.. + +.|+|+++|+.|..|++..+.++++++...+ ..+.++
T Consensus 233 ~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~-i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~-----~~l~~~ 306 (332)
T TIGR01607 233 IIKFDKFRYDGGITFNLASELIKATDTLDCDIDY-IPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISN-----KELHTL 306 (332)
T ss_pred HHhcCccccCCcccHHHHHHHHHHHHHHHhhHhh-CCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCC-----cEEEEE
Confidence 00 0010 0000111111100 012222 3 6899999999999999999998888775433 233337
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHHH
Q 004866 697 LTTDIVEENRYLQCKESALETAFLI 721 (726)
Q Consensus 697 ~~~gH~~~~~~~~~~~~~~~~~fl~ 721 (726)
++++|.........+..+.+.+||.
T Consensus 307 ~g~~H~i~~E~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 307 EDMDHVITIEPGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCCCCCccCCCHHHHHHHHHHHhh
Confidence 9999976543334455566788875
No 53
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.5e-12 Score=142.61 Aligned_cols=199 Identities=16% Similarity=0.091 Sum_probs=130.8
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+..++|||||++|||+....+ ..+|+++|+.+|+...+.. .+....++|||||+.|+|+.... ...+||.+++.
T Consensus 205 ~v~~p~wSPDG~~la~~s~~~~--~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~--g~~~Iy~~d~~ 280 (429)
T PRK01742 205 PLMSPAWSPDGSKLAYVSFENK--KSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKD--GVLNIYVMGAN 280 (429)
T ss_pred ccccceEcCCCCEEEEEEecCC--CcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecC--CcEEEEEEECC
Confidence 3567899999999999876433 4679999999997655443 33455799999999999985432 23579999997
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecC
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~ 281 (726)
++....+.. . ......+.|||||++|++.+++....+||.++..++ ..+.+. .. +....++|+|+.+++.+.
T Consensus 281 ~~~~~~lt~-~--~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~--~~~~l~-~~-~~~~~~SpDG~~ia~~~~- 352 (429)
T PRK01742 281 GGTPSQLTS-G--AGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGG--GASLVG-GR-GYSAQISADGKTLVMING- 352 (429)
T ss_pred CCCeEeecc-C--CCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCC--CeEEec-CC-CCCccCCCCCCEEEEEcC-
Confidence 765333322 1 112346899999999999988777789999998763 334442 22 123457899999888754
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
. .++.+|+. .+.++.+... ....-..+++.++.|++...+++...+++++.+
T Consensus 353 ~---------~i~~~Dl~----~g~~~~lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~ 404 (429)
T PRK01742 353 D---------NVVKQDLT----SGSTEVLSST-FLDESPSISPNGIMIIYSSTQGLGKVLQLVSAD 404 (429)
T ss_pred C---------CEEEEECC----CCCeEEecCC-CCCCCceECCCCCEEEEEEcCCCceEEEEEECC
Confidence 1 25667765 2334433322 111112355556777777666665566666654
No 54
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.7e-12 Score=142.00 Aligned_cols=246 Identities=15% Similarity=0.167 Sum_probs=162.1
Q ss_pred CEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeee
Q 004866 134 KFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEE 212 (726)
Q Consensus 134 ~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~ 212 (726)
.+|||.....+ .++|+++|.++.....++. ...+..++|||||+.|+|+.... ...+||++++.++....+. ..
T Consensus 164 ~~iayv~~~~~--~~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~--~~~~I~~~dl~~g~~~~l~-~~ 238 (427)
T PRK02889 164 TRIAYVIKTGN--RYQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFES--KKPVVYVHDLATGRRRVVA-NF 238 (427)
T ss_pred cEEEEEEccCC--ccEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccC--CCcEEEEEECCCCCEEEee-cC
Confidence 67999875433 5789999997766555543 44567899999999999986542 3357999999887533332 11
Q ss_pred cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecCcccCCCCCCe
Q 004866 213 SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDAAKEGQEADNH 291 (726)
Q Consensus 213 ~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~~~~~ 291 (726)
.. ....+.|||||+.|++........+||.+|+.+ +..+.++.... .....+++||+.++|.++..+ ..
T Consensus 239 ~g--~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~--~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g------~~ 308 (427)
T PRK02889 239 KG--SNSAPAWSPDGRTLAVALSRDGNSQIYTVNADG--SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGG------AP 308 (427)
T ss_pred CC--CccceEECCCCCEEEEEEccCCCceEEEEECCC--CCcEECCCCCCCCcCeEEcCCCCEEEEEecCCC------Cc
Confidence 11 223578999999999988777778999999977 34566654332 234678899999999887653 35
Q ss_pred EEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCCce
Q 004866 292 YLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYV 371 (726)
Q Consensus 292 ~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~ 371 (726)
.|+.++++ . +..+.+........-..+++.+++|++....++...|+++++.++. ... +.-....
T Consensus 309 ~Iy~~~~~-~---g~~~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~---~~~--------lt~~~~~ 373 (427)
T PRK02889 309 QIYRMPAS-G---GAAQRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ---VTA--------LTDTTRD 373 (427)
T ss_pred EEEEEECC-C---CceEEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC---eEE--------ccCCCCc
Confidence 68888875 2 3344443222111123466677888888777777889999987543 111 1111111
Q ss_pred eeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 372 SQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
....+++|+..++|....-. -..++.++...+..+.+.
T Consensus 374 ----~~p~~spdg~~l~~~~~~~g-~~~l~~~~~~g~~~~~l~ 411 (427)
T PRK02889 374 ----ESPSFAPNGRYILYATQQGG-RSVLAAVSSDGRIKQRLS 411 (427)
T ss_pred ----cCceECCCCCEEEEEEecCC-CEEEEEEECCCCceEEee
Confidence 12345778888887765443 357899998654444443
No 55
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.57 E-value=1.4e-12 Score=143.15 Aligned_cols=249 Identities=13% Similarity=0.134 Sum_probs=164.3
Q ss_pred CCEEEEEEeCCC--CcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEE
Q 004866 133 HKFLAYTMYDKD--NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALL 209 (726)
Q Consensus 133 G~~la~~~~~~g--~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv 209 (726)
+++|||+....+ ...++|+++|.+++....++. ......+.|||||+.|+|++... ...+||++++.++.... +
T Consensus 167 ~~~ia~v~~~~~~~~~~~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~--~~~~l~~~dl~~g~~~~-l 243 (433)
T PRK04922 167 WTRIAYVTVSGAGGAMRYALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFER--GRSAIYVQDLATGQREL-V 243 (433)
T ss_pred cceEEEEEEeCCCCCceEEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCC--CCcEEEEEECCCCCEEE-e
Confidence 567899865432 346789999998877766654 44567899999999999986542 34589999998765332 2
Q ss_pred eeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecCcccCCCC
Q 004866 210 LEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDAAKEGQEA 288 (726)
Q Consensus 210 ~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~~ 288 (726)
.... . ....+.|||||+.|++.....+..+||++|+.+ ++.+.++.... .....+++||+.++|.++..+
T Consensus 244 ~~~~-g-~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~--g~~~~lt~~~~~~~~~~~spDG~~l~f~sd~~g----- 314 (433)
T PRK04922 244 ASFR-G-INGAPSFSPDGRRLALTLSRDGNPEIYVMDLGS--RQLTRLTNHFGIDTEPTWAPDGKSIYFTSDRGG----- 314 (433)
T ss_pred ccCC-C-CccCceECCCCCEEEEEEeCCCCceEEEEECCC--CCeEECccCCCCccceEECCCCCEEEEEECCCC-----
Confidence 2211 1 223578999999999887766678999999987 44566654432 234678899999999988654
Q ss_pred CCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCC
Q 004866 289 DNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLP 368 (726)
Q Consensus 289 ~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p 368 (726)
..+|+.++++ . +..+.+........-..++..++.|++....++...|+++++.++. .. .+.-.
T Consensus 315 -~~~iy~~dl~-~---g~~~~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~---~~--------~Lt~~ 378 (433)
T PRK04922 315 -RPQIYRVAAS-G---GSAERLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS---VR--------TLTPG 378 (433)
T ss_pred -CceEEEEECC-C---CCeEEeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC---eE--------ECCCC
Confidence 2568888876 2 3445444322111123566667888888777777789999986542 11 11111
Q ss_pred CceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 369 KYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
... ....+++|+..++|.... ..-..+|.+|...+..+.+.
T Consensus 379 ~~~----~~p~~spdG~~i~~~s~~-~g~~~L~~~~~~g~~~~~l~ 419 (433)
T PRK04922 379 SLD----ESPSFAPNGSMVLYATRE-GGRGVLAAVSTDGRVRQRLV 419 (433)
T ss_pred CCC----CCceECCCCCEEEEEEec-CCceEEEEEECCCCceEEcc
Confidence 111 123456788888776554 33458999999766555554
No 56
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.57 E-value=5.3e-14 Score=129.03 Aligned_cols=216 Identities=14% Similarity=0.145 Sum_probs=153.6
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHH-HHHHHHCCcEEEEEccCCCCCCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE-LKSLLDRGWVVAFADVRGGGGGG 538 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~~~G~~v~~~d~RG~g~~g 538 (726)
..+..-|+++..++|.+++++|++.-+ ...|+++++|+..|.. +. +-+. .-.+.+.+..|++++|||.|.+.
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E-----~S~pTlLyfh~NAGNm-Gh-r~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSE-----SSRPTLLYFHANAGNM-GH-RLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeeccc-----CCCceEEEEccCCCcc-cc-hhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 345677899999999999999988722 3679999999865532 22 2233 34566789999999999988653
Q ss_pred CcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCC
Q 004866 539 KKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPI 618 (726)
Q Consensus 539 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~ 618 (726)
..-.+. .-.-|-.++++||..+...|..+|.++|.|.||..+..++....++..|+|...-+..+...+..--
T Consensus 122 GspsE~-------GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v 194 (300)
T KOG4391|consen 122 GSPSEE-------GLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLV 194 (300)
T ss_pred CCcccc-------ceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchhhhhhee
Confidence 332221 2357889999999999999999999999999999999999988999999998877766533221111
Q ss_pred CCCChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcC
Q 004866 619 LPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLT 698 (726)
Q Consensus 619 ~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 698 (726)
.|+.......+ .++ ..++.+..+.. -+.|.|++.|..|..|||.+..+++..+-.+.+ +... +|+
T Consensus 195 ~p~~~k~i~~l-------c~k--n~~~S~~ki~~-~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~K----rl~e-FP~ 259 (300)
T KOG4391|consen 195 FPFPMKYIPLL-------CYK--NKWLSYRKIGQ-CRMPFLFISGLKDELVPPVMMRQLYELCPSRTK----RLAE-FPD 259 (300)
T ss_pred ccchhhHHHHH-------HHH--hhhcchhhhcc-ccCceEEeecCccccCCcHHHHHHHHhCchhhh----hhee-CCC
Confidence 11111100000 011 02233334443 688999999999999999999999999877653 3333 799
Q ss_pred CCCCCC
Q 004866 699 TDIVEE 704 (726)
Q Consensus 699 ~gH~~~ 704 (726)
+.|...
T Consensus 260 gtHNDT 265 (300)
T KOG4391|consen 260 GTHNDT 265 (300)
T ss_pred CccCce
Confidence 999754
No 57
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.56 E-value=3e-13 Score=138.94 Aligned_cols=241 Identities=14% Similarity=0.095 Sum_probs=153.4
Q ss_pred ceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC---CCccchHHHHHHHH-CCcEEEEEccCCCCCCC
Q 004866 463 YSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL---LDKRWRSELKSLLD-RGWVVAFADVRGGGGGG 538 (726)
Q Consensus 463 ~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~---~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g 538 (726)
.....+.+... ..|+..|+.|.......+.|+|||+|||-... ..+.|......+++ .+.+|+.+|||-..+
T Consensus 61 v~~~dv~~~~~--~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPE-- 136 (336)
T KOG1515|consen 61 VTSKDVTIDPF--TNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPE-- 136 (336)
T ss_pred ceeeeeEecCC--CCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCC--
Confidence 34455555443 45788889998765547899999999974321 23445555666655 699999999995544
Q ss_pred CcccccccccCCCCcHHHHHHHHHHHHHc----CCCCCCcEEEEEecccHHHHHHHHHcC------CCceeEEEEeCCcc
Q 004866 539 KKWHHDGRRTKKLNSIKDFISCARFLIEK----EIVKEHKLAGWGYSAGGLLVAAAINCC------PDLFRAVVLEVPFL 608 (726)
Q Consensus 539 ~~~~~~~~~~~~~~~~~D~~~~~~~l~~~----~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~ 608 (726)
...+..++|..+++.|+.++ ..+|++||+|+|-|+||.+|..++.+. +-..++.|+..|++
T Consensus 137 ---------h~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 137 ---------HPFPAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred ---------CCCCccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 45678999999999999986 457999999999999999998877542 34689999999998
Q ss_pred cccccccC------CCCC-CC----hhhhcccCCCCChhHHHHHHhcCccc-----ccccCCCCCeEEEEecCCCCcChH
Q 004866 609 DATNTLLY------PILP-LI----AADYEEFGYPGDIDDFHAIRNYSPYD-----NIQKDVLYPAVLVTSSFNTRFGVW 672 (726)
Q Consensus 609 d~~~~~~~------~~~~-~~----~~~~~~~g~~~~~~~~~~~~~~sp~~-----~i~~~~~~P~lli~g~~D~~V~~~ 672 (726)
........ ...+ .. ..+|. .-.|......+ -.-.+|.. ........|+|++.++.|... .
T Consensus 208 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~-~~lP~~~~~~~-~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D 283 (336)
T KOG1515|consen 208 QGTDRTESEKQQNLNGSPELARPKIDKWWR-LLLPNGKTDLD-HPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--D 283 (336)
T ss_pred CCCCCCCHHHHHhhcCCcchhHHHHHHHHH-HhCCCCCCCcC-CccccccccccccCccccCCCceEEEEeCchhhh--h
Confidence 76542211 0000 00 00111 11111000000 00012222 111112345888999999322 6
Q ss_pred HHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc----hhhHHHHHHHHHHHHHHh
Q 004866 673 EAAKWVARVRESTIYDPKRPILLNLTTDIVEEN----RYLQCKESALETAFLIKM 723 (726)
Q Consensus 673 ~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~----~~~~~~~~~~~~~fl~~~ 723 (726)
+...++++|++.|++. .++.++++.|++.. .....+.+....+|+...
T Consensus 284 ~~~~Y~~~Lkk~Gv~v---~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 284 EGLAYAEKLKKAGVEV---TLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred hhHHHHHHHHHcCCeE---EEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 8999999999999762 33338999998643 234555566667777653
No 58
>PRK10985 putative hydrolase; Provisional
Probab=99.53 E-value=5.4e-13 Score=140.59 Aligned_cols=244 Identities=18% Similarity=0.145 Sum_probs=143.3
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
.++..+...||..+.......+. ...+.|+||++||..+..........+..|+++||.|+.+|+||+|+.......
T Consensus 31 ~~~~~~~~~dg~~~~l~w~~~~~--~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~- 107 (324)
T PRK10985 31 PYWQRLELPDGDFVDLAWSEDPA--QARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHR- 107 (324)
T ss_pred cceeEEECCCCCEEEEecCCCCc--cCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcc-
Confidence 34445678899877654332221 223568999999976654322234466788999999999999999865322111
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCc--eeEEEEeCCcccccccc--cCC---
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL--FRAVVLEVPFLDATNTL--LYP--- 617 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~p~~d~~~~~--~~~--- 617 (726)
.......+|+.++++++.++. ...++.++|+|+||.+++.++.++++. ++++|+.++..++.... ...
T Consensus 108 ---~~~~~~~~D~~~~i~~l~~~~--~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~ 182 (324)
T PRK10985 108 ---IYHSGETEDARFFLRWLQREF--GHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFS 182 (324)
T ss_pred ---eECCCchHHHHHHHHHHHHhC--CCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHH
Confidence 111235799999999998752 336899999999999888777766543 77888877776543110 000
Q ss_pred ------------------------CCCCC---------hhhhcc-cCCCC--ChhHHHHHHhcCcccccccCCCCCeEEE
Q 004866 618 ------------------------ILPLI---------AADYEE-FGYPG--DIDDFHAIRNYSPYDNIQKDVLYPAVLV 661 (726)
Q Consensus 618 ------------------------~~~~~---------~~~~~~-~g~~~--~~~~~~~~~~~sp~~~i~~~~~~P~lli 661 (726)
..+.. ...+++ +..+. -....+++...++...+.+ ++.|+++|
T Consensus 183 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~-i~~P~lii 261 (324)
T PRK10985 183 RVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQ-IRKPTLII 261 (324)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhC-CCCCEEEE
Confidence 00000 000000 00110 0112344555565555665 89999999
Q ss_pred EecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc-----hhhHHHHHHHHHHHHHHhhc
Q 004866 662 TSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-----RYLQCKESALETAFLIKMME 725 (726)
Q Consensus 662 ~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-----~~~~~~~~~~~~~fl~~~l~ 725 (726)
+|..|+.+++.....+.+... + ..+.+.+++||..-- ....|-+ ..+.+|+...++
T Consensus 262 ~g~~D~~~~~~~~~~~~~~~~--~-----~~~~~~~~~GH~~~~~g~~~~~~~w~~-~~~~~~~~~~~~ 322 (324)
T PRK10985 262 HAKDDPFMTHEVIPKPESLPP--N-----VEYQLTEHGGHVGFVGGTLLKPQMWLE-QRIPDWLTTYLE 322 (324)
T ss_pred ecCCCCCCChhhChHHHHhCC--C-----eEEEECCCCCceeeCCCCCCCCCccHH-HHHHHHHHHhhc
Confidence 999999998766555422111 1 112226889996321 1223332 235788876653
No 59
>PLN02511 hydrolase
Probab=99.53 E-value=5.9e-13 Score=143.33 Aligned_cols=141 Identities=16% Similarity=0.137 Sum_probs=98.1
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHH 543 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 543 (726)
..++..+...||..+....+.+.........|+||++||..++.....+......+.++||.|+++|+||+|+....
T Consensus 70 ~~~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~--- 146 (388)
T PLN02511 70 RYRRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVT--- 146 (388)
T ss_pred ceeEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCC---
Confidence 44555677889988876544322111223468999999976654322223455667789999999999999975321
Q ss_pred cccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCc--eeEEEEeCCcccc
Q 004866 544 DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDL--FRAVVLEVPFLDA 610 (726)
Q Consensus 544 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~--f~a~v~~~p~~d~ 610 (726)
..........+|+.+++++|..+ + ...++.++|+|+||.+++..+.++|+. ++++++.++..++
T Consensus 147 -~~~~~~~~~~~Dl~~~i~~l~~~-~-~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l 212 (388)
T PLN02511 147 -TPQFYSASFTGDLRQVVDHVAGR-Y-PSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDL 212 (388)
T ss_pred -CcCEEcCCchHHHHHHHHHHHHH-C-CCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCH
Confidence 01111235678999999999865 2 235899999999999999999999986 6777777665554
No 60
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.51 E-value=1.2e-12 Score=134.34 Aligned_cols=237 Identities=12% Similarity=0.096 Sum_probs=138.3
Q ss_pred EEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCC--ccchHHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 467 QYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLD--KRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 467 ~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~--~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
.+.+.. +|..+.+.++.|.+. +.|.||++|||+..... ..+...+..|+++||.|+.+|+||+|.+....
T Consensus 4 ~~~~~~-~~~~l~g~~~~p~~~----~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~--- 75 (274)
T TIGR03100 4 ALTFSC-EGETLVGVLHIPGAS----HTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGEN--- 75 (274)
T ss_pred eEEEEc-CCcEEEEEEEcCCCC----CCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCC---
Confidence 456664 577899988888642 23567777887654321 22445578899999999999999999763221
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCC-----
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPIL----- 619 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~----- 619 (726)
.......+|+.++++++.++. ...++|.++|+|+||++++.++.. +..++++|+.+|.+...........
T Consensus 76 ---~~~~~~~~d~~~~~~~l~~~~-~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~~ 150 (274)
T TIGR03100 76 ---LGFEGIDADIAAAIDAFREAA-PHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYYL 150 (274)
T ss_pred ---CCHHHHHHHHHHHHHHHHhhC-CCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHHH
Confidence 111235688999999998651 123679999999999999888764 5789999999987542210000000
Q ss_pred --CCC-hhhhccc-CCCCChhHHHHHHh----cCc-----c---------cccccCCCCCeEEEEecCCCCcChHH----
Q 004866 620 --PLI-AADYEEF-GYPGDIDDFHAIRN----YSP-----Y---------DNIQKDVLYPAVLVTSSFNTRFGVWE---- 673 (726)
Q Consensus 620 --~~~-~~~~~~~-g~~~~~~~~~~~~~----~sp-----~---------~~i~~~~~~P~lli~g~~D~~V~~~~---- 673 (726)
... ..+...+ |...-......+.. ..+ . ..+.. +..|+|+++|+.|...+...
T Consensus 151 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~P~ll~~g~~D~~~~~~~~~~~ 229 (274)
T TIGR03100 151 GQLLSADFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLER-FQGPVLFILSGNDLTAQEFADSVL 229 (274)
T ss_pred HHHhChHHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHh-cCCcEEEEEcCcchhHHHHHHHhc
Confidence 000 0000011 11100000111111 101 0 11223 68899999999996543221
Q ss_pred -HHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHH
Q 004866 674 -AAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIK 722 (726)
Q Consensus 674 -~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 722 (726)
+.++.+.+...++ .+..++++||.......+.+..+.+.+||.+
T Consensus 230 ~~~~~~~~l~~~~v-----~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 230 GEPAWRGALEDPGI-----ERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred cChhhHHHhhcCCe-----EEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 1333333443332 2222799999665555556666677889853
No 61
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.50 E-value=3.1e-13 Score=124.61 Aligned_cols=145 Identities=16% Similarity=0.208 Sum_probs=106.9
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcE
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKL 575 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 575 (726)
+||++||+.+. ...|....+.|+++||.|+.+|+|+.+... ...++.+.++++.+. ..++++|
T Consensus 1 ~vv~~HG~~~~--~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGS--RRDYQPLAEALAEQGYAVVAFDYPGHGDSD--------------GADAVERVLADIRAG-YPDPDRI 63 (145)
T ss_dssp EEEEECTTTTT--THHHHHHHHHHHHTTEEEEEESCTTSTTSH--------------HSHHHHHHHHHHHHH-HCTCCEE
T ss_pred CEEEECCCCCC--HHHHHHHHHHHHHCCCEEEEEecCCCCccc--------------hhHHHHHHHHHHHhh-cCCCCcE
Confidence 58899997663 456788889999999999999999988641 112444445544322 2288999
Q ss_pred EEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCcccccccCCC
Q 004866 576 AGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVL 655 (726)
Q Consensus 576 ~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~ 655 (726)
+++|+|+||.+++.++.+. ..++++|+.+|+.+ .+. +.+ .+
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~-------------------------~~~------------~~~-~~ 104 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD-------------------------SED------------LAK-IR 104 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-TTESEEEEESESSG-------------------------CHH------------HTT-TT
T ss_pred EEEEEccCcHHHHHHhhhc-cceeEEEEecCccc-------------------------hhh------------hhc-cC
Confidence 9999999999999999987 78899998888311 001 112 46
Q ss_pred CCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCC
Q 004866 656 YPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIV 702 (726)
Q Consensus 656 ~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 702 (726)
.|+++++|..|..+++++..+++++++.. ..++.+++++|+
T Consensus 105 ~pv~~i~g~~D~~~~~~~~~~~~~~~~~~------~~~~~i~g~~H~ 145 (145)
T PF12695_consen 105 IPVLFIHGENDPLVPPEQVRRLYEALPGP------KELYIIPGAGHF 145 (145)
T ss_dssp SEEEEEEETT-SSSHHHHHHHHHHHHCSS------EEEEEETTS-TT
T ss_pred CcEEEEEECCCCcCCHHHHHHHHHHcCCC------cEEEEeCCCcCc
Confidence 69999999999999999999999999832 123337999995
No 62
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.50 E-value=3.1e-12 Score=133.83 Aligned_cols=129 Identities=19% Similarity=0.161 Sum_probs=90.3
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
...+.+...||..+...+. ..+ .+ ..|.||++||.+... ..|...+..|.++||.|+++|.||+|.+....
T Consensus 21 ~~~~~~~~~~~~~~~i~y~-~~G-~~--~~~~lvliHG~~~~~--~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~--- 91 (302)
T PRK00870 21 PHYVDVDDGDGGPLRMHYV-DEG-PA--DGPPVLLLHGEPSWS--YLYRKMIPILAAAGHRVIAPDLIGFGRSDKPT--- 91 (302)
T ss_pred ceeEeecCCCCceEEEEEE-ecC-CC--CCCEEEEECCCCCch--hhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC---
Confidence 3445566666765554322 222 11 247899999975533 45777788888889999999999999753211
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
.....+++++.+.+..++++ .+.+++.++|||+||.+++.++.++|++++++|+.++.
T Consensus 92 ---~~~~~~~~~~a~~l~~~l~~--l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 92 ---RREDYTYARHVEWMRSWFEQ--LDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred ---CcccCCHHHHHHHHHHHHHH--cCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCC
Confidence 01123567776666666654 23468999999999999999999999999999988763
No 63
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.49 E-value=1.7e-12 Score=139.11 Aligned_cols=161 Identities=14% Similarity=0.131 Sum_probs=120.9
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 203 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~ 203 (726)
..++|||||++|||+.++.| ..+||++|+.++....++. .+....+.|||||++|+|++ ++.+++ +||++++...
T Consensus 241 ~~P~fspDG~~l~f~~~rdg--~~~iy~~dl~~~~~~~Lt~~~gi~~~Ps~spdG~~ivf~S-dr~G~p-~I~~~~~~g~ 316 (425)
T COG0823 241 GAPAFSPDGSKLAFSSSRDG--SPDIYLMDLDGKNLPRLTNGFGINTSPSWSPDGSKIVFTS-DRGGRP-QIYLYDLEGS 316 (425)
T ss_pred CCccCCCCCCEEEEEECCCC--CccEEEEcCCCCcceecccCCccccCccCCCCCCEEEEEe-CCCCCc-ceEEECCCCC
Confidence 46789999999999998876 5789999999998766655 44556899999999999994 555555 8999999887
Q ss_pred CceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCcc
Q 004866 204 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAK 283 (726)
Q Consensus 204 ~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~ 283 (726)
+..++++...... .+.|||||++|++.....+...+...++.++.. .+.++.........+.++|+.+.+.++..+
T Consensus 317 ~~~riT~~~~~~~---~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~-~~~lt~~~~~e~ps~~~ng~~i~~~s~~~~ 392 (425)
T COG0823 317 QVTRLTFSGGGNS---NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGK-IRILTSTYLNESPSWAPNGRMIMFSSGQGG 392 (425)
T ss_pred ceeEeeccCCCCc---CccCCCCCCEEEEEeccCCceeeEEeccCCCCc-EEEccccccCCCCCcCCCCceEEEeccCCC
Confidence 7656655433222 578999999999998554446788888877432 666766665556677889999888877653
Q ss_pred cCCCCCCeEEEEeeCC
Q 004866 284 EGQEADNHYLLRCPVD 299 (726)
Q Consensus 284 ~~~~~~~~~l~~~~~~ 299 (726)
...|..++.+
T Consensus 393 ------~~~l~~~s~~ 402 (425)
T COG0823 393 ------GSVLSLVSLD 402 (425)
T ss_pred ------CceEEEeecc
Confidence 2456655554
No 64
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.48 E-value=6.9e-14 Score=138.07 Aligned_cols=186 Identities=17% Similarity=0.140 Sum_probs=112.2
Q ss_pred EEEEcCCCCCCCC-ccchHHHHHHHH-CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHc---CCCC
Q 004866 497 LLHGHGAYGELLD-KRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK---EIVK 571 (726)
Q Consensus 497 vl~~hGg~~~~~~-~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---~~~d 571 (726)
|||+|||...... .........|++ +|++|+.+|||-..+ ...+..++|+.++++|+.++ -..|
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~-----------~~~p~~~~D~~~a~~~l~~~~~~~~~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPE-----------APFPAALEDVKAAYRWLLKNADKLGID 69 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTT-----------SSTTHHHHHHHHHHHHHHHTHHHHTEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccccc-----------ccccccccccccceeeecccccccccc
Confidence 7899997554322 233445667776 899999999996554 23456899999999999987 2368
Q ss_pred CCcEEEEEecccHHHHHHHHHcCCC----ceeEEEEeCCcccccccc---c-----CCCCC-CChhhh----cccCCCCC
Q 004866 572 EHKLAGWGYSAGGLLVAAAINCCPD----LFRAVVLEVPFLDATNTL---L-----YPILP-LIAADY----EEFGYPGD 634 (726)
Q Consensus 572 ~~ri~i~G~S~GG~l~~~~~~~~p~----~f~a~v~~~p~~d~~~~~---~-----~~~~~-~~~~~~----~~~g~~~~ 634 (726)
++||+|+|.|+||.|++.++.+..+ ..+++++.+|+.|+.... . ....+ +..... ..+- +..
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 148 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYL-PGS 148 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHH-STG
T ss_pred ccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccccchhccccccccccccccccccccccccccccccc-ccc
Confidence 9999999999999999998865332 489999999998871100 0 00001 100000 0000 000
Q ss_pred hhHHHHHHhcCcccccccCCCCCeE-EEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCC
Q 004866 635 IDDFHAIRNYSPYDNIQKDVLYPAV-LVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVE 703 (726)
Q Consensus 635 ~~~~~~~~~~sp~~~i~~~~~~P~l-li~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 703 (726)
.. .-...||+.. ......|++ +++|+.|.. ..++.+|+++|+++|++ ..+.++++.+|++
T Consensus 149 ~~---~~~~~sp~~~-~~~~~~Pp~~i~~g~~D~l--~~~~~~~~~~L~~~gv~---v~~~~~~g~~H~f 209 (211)
T PF07859_consen 149 DR---DDPLASPLNA-SDLKGLPPTLIIHGEDDVL--VDDSLRFAEKLKKAGVD---VELHVYPGMPHGF 209 (211)
T ss_dssp GT---TSTTTSGGGS-SCCTTCHEEEEEEETTSTT--HHHHHHHHHHHHHTT-E---EEEEEETTEETTG
T ss_pred cc---cccccccccc-cccccCCCeeeeccccccc--hHHHHHHHHHHHHCCCC---EEEEEECCCeEEe
Confidence 00 0013466654 111235555 555555543 46899999999999853 1222289999974
No 65
>PLN00021 chlorophyllase
Probab=99.47 E-value=4.1e-12 Score=131.45 Aligned_cols=183 Identities=17% Similarity=0.167 Sum_probs=122.0
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcH
Q 004866 475 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSI 554 (726)
Q Consensus 475 G~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 554 (726)
...+++.|++|.. .+++|+||++||+... ...|......|+++||+|+++|++|.+.. .....+
T Consensus 36 ~~~~p~~v~~P~~---~g~~PvVv~lHG~~~~--~~~y~~l~~~Las~G~~VvapD~~g~~~~-----------~~~~~i 99 (313)
T PLN00021 36 SPPKPLLVATPSE---AGTYPVLLFLHGYLLY--NSFYSQLLQHIASHGFIVVAPQLYTLAGP-----------DGTDEI 99 (313)
T ss_pred CCCceEEEEeCCC---CCCCCEEEEECCCCCC--cccHHHHHHHHHhCCCEEEEecCCCcCCC-----------CchhhH
Confidence 3568999999974 3678999999997553 34567778889999999999999874321 112356
Q ss_pred HHHHHHHHHHHHc--------CCCCCCcEEEEEecccHHHHHHHHHcCCC-----ceeEEEEeCCcccccccccCCCCCC
Q 004866 555 KDFISCARFLIEK--------EIVKEHKLAGWGYSAGGLLVAAAINCCPD-----LFRAVVLEVPFLDATNTLLYPILPL 621 (726)
Q Consensus 555 ~D~~~~~~~l~~~--------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-----~f~a~v~~~p~~d~~~~~~~~~~~~ 621 (726)
+|..++++|+.+. ...|++|++|+|||+||++++.++..+++ .|+++|+..|+...... ..
T Consensus 100 ~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g~~~~--~~---- 173 (313)
T PLN00021 100 KDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDGTSKG--KQ---- 173 (313)
T ss_pred HHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccccccc--cC----
Confidence 7777778887752 23577999999999999999999988774 57888888887543210 00
Q ss_pred ChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCC-----Cc----ChH-HHHHHHHHHHhcCCCCCCC
Q 004866 622 IAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNT-----RF----GVW-EAAKWVARVRESTIYDPKR 691 (726)
Q Consensus 622 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~-----~V----~~~-~~~~~~~~L~~~~~~~~~~ 691 (726)
..|. . ..+.|- .. ++..|.|++.++.|. .+ |.. +-.+|+++++...
T Consensus 174 --------~~p~---i----l~~~~~--s~-~~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~------ 229 (313)
T PLN00021 174 --------TPPP---V----LTYAPH--SF-NLDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPA------ 229 (313)
T ss_pred --------CCCc---c----cccCcc--cc-cCCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCe------
Confidence 0111 0 111111 11 257899999888763 22 233 3377888877532
Q ss_pred cEEEEcCCCCCC
Q 004866 692 PILLNLTTDIVE 703 (726)
Q Consensus 692 ~~~~~~~~gH~~ 703 (726)
..++.+++||..
T Consensus 230 ~~~~~~~~gH~~ 241 (313)
T PLN00021 230 VHFVAKDYGHMD 241 (313)
T ss_pred eeeeecCCCcce
Confidence 222267888864
No 66
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.47 E-value=1.1e-12 Score=135.74 Aligned_cols=208 Identities=13% Similarity=0.058 Sum_probs=118.1
Q ss_pred ccEEEEEcCCCCCCCCccch---HHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWR---SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~---~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
.|.||++||..... ..|. ..+..|++.||.|+++|+||+|.+...... ........+|+.+.++.+
T Consensus 30 ~~~ivllHG~~~~~--~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~l~~~l~~l------ 98 (282)
T TIGR03343 30 GEAVIMLHGGGPGA--GGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMD---EQRGLVNARAVKGLMDAL------ 98 (282)
T ss_pred CCeEEEECCCCCch--hhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCc---ccccchhHHHHHHHHHHc------
Confidence 46799999965433 2333 234567788999999999999976432110 000111234444444332
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccC-C-----------CCCCC---hhhhccc-CCC-C
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY-P-----------ILPLI---AADYEEF-GYP-G 633 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~-~-----------~~~~~---~~~~~~~-g~~-~ 633 (726)
+.+++.++|+|+||.+++.++.++|++++++|+.+|.......... . ..+.. ......+ -++ .
T Consensus 99 ~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T TIGR03343 99 DIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSL 178 (282)
T ss_pred CCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCccc
Confidence 4579999999999999999999999999999998774211000000 0 00000 0000000 000 0
Q ss_pred -C--------------hhHHHHH-Hh--cCcc------cccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCC
Q 004866 634 -D--------------IDDFHAI-RN--YSPY------DNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDP 689 (726)
Q Consensus 634 -~--------------~~~~~~~-~~--~sp~------~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 689 (726)
. ++....+ .. ..++ ..+.+ ++.|+|+++|+.|..|++..+.++++.+...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~~----- 252 (282)
T TIGR03343 179 ITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGE-IKAKTLVTWGRDDRFVPLDHGLKLLWNMPDA----- 252 (282)
T ss_pred CcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhh-CCCCEEEEEccCCCcCCchhHHHHHHhCCCC-----
Confidence 0 0111111 11 1111 22344 8899999999999999999998888877532
Q ss_pred CCcEEEEcCCCCCCCchhhHHHHHHHHHHHHH
Q 004866 690 KRPILLNLTTDIVEENRYLQCKESALETAFLI 721 (726)
Q Consensus 690 ~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 721 (726)
..++ .+++||+... ++.........+||.
T Consensus 253 -~~~~-i~~agH~~~~-e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 253 -QLHV-FSRCGHWAQW-EHADAFNRLVIDFLR 281 (282)
T ss_pred -EEEE-eCCCCcCCcc-cCHHHHHHHHHHHhh
Confidence 2233 6899997533 122222334457764
No 67
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.47 E-value=1.6e-13 Score=139.76 Aligned_cols=144 Identities=23% Similarity=0.254 Sum_probs=93.4
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC------------CCcc----chHHHHHHHHCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL------------LDKR----WRSELKSLLDRG 523 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~------------~~~~----~~~~~~~l~~~G 523 (726)
.+.|..|.+.|.+.++..++++|+.|++. +++.|+||++||-.+.. .... .......|+++|
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~G 160 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRG 160 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCC
Confidence 45789999999999999999999999975 57899999888721110 0000 123467899999
Q ss_pred cEEEEEccCCCCCCCCcccccc-----------------cccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHH
Q 004866 524 WVVAFADVRGGGGGGKKWHHDG-----------------RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLL 586 (726)
Q Consensus 524 ~~v~~~d~RG~g~~g~~~~~~~-----------------~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l 586 (726)
|+|+++|.+|.|+.|..=.... .-..+...++| +.+++||.+++.+|++|||++|+|+||+.
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~dd-mr~lDfL~slpeVD~~RIG~~GfSmGg~~ 239 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDD-MRALDFLASLPEVDPDRIGCMGFSMGGYR 239 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHH-HHHHHHHCT-TTEEEEEEEEEEEGGGHHH
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHH-HHHHHHHhcCcccCccceEEEeecccHHH
Confidence 9999999999998765321111 11112223444 56999999999999999999999999999
Q ss_pred HHHHHHcCCCceeEEEEeCCc
Q 004866 587 VAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 587 ~~~~~~~~p~~f~a~v~~~p~ 607 (726)
++++++. .++++|+|+.+=+
T Consensus 240 a~~LaAL-DdRIka~v~~~~l 259 (390)
T PF12715_consen 240 AWWLAAL-DDRIKATVANGYL 259 (390)
T ss_dssp HHHHHHH--TT--EEEEES-B
T ss_pred HHHHHHc-chhhHhHhhhhhh
Confidence 9999986 5677887765444
No 68
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.46 E-value=1.5e-12 Score=132.25 Aligned_cols=208 Identities=15% Similarity=0.137 Sum_probs=124.7
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
+.|+||++||..+.. ..|...+..| .+||.|+++|+||+|.+.... .....++|+...+..++++ .+.
T Consensus 12 ~~~~iv~lhG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~~~~~i~~--~~~ 79 (257)
T TIGR03611 12 DAPVVVLSSGLGGSG--SYWAPQLDVL-TQRFHVVTYDHRGTGRSPGEL-------PPGYSIAHMADDVLQLLDA--LNI 79 (257)
T ss_pred CCCEEEEEcCCCcch--hHHHHHHHHH-HhccEEEEEcCCCCCCCCCCC-------cccCCHHHHHHHHHHHHHH--hCC
Confidence 468899999976543 3455554444 568999999999999764321 1123566666666655543 345
Q ss_pred CcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccc-----------ccCCCCCCC----------hhhhcc---
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT-----------LLYPILPLI----------AADYEE--- 628 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~-----------~~~~~~~~~----------~~~~~~--- 628 (726)
.++.++|+|+||++++.++.++|+.++++|+.+++...... +........ ..+...
T Consensus 80 ~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (257)
T TIGR03611 80 ERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAA 159 (257)
T ss_pred CcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccch
Confidence 78999999999999999999999999999988775432110 000000000 000000
Q ss_pred ---------cCCC-CChh---HHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE
Q 004866 629 ---------FGYP-GDID---DFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL 695 (726)
Q Consensus 629 ---------~g~~-~~~~---~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 695 (726)
.... .... ....+..++....+.. ++.|+++++|..|..+|+.++.++++.+... .+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~-------~~~~ 231 (257)
T TIGR03611 160 RLAADEAHALAHFPGKANVLRRINALEAFDVSARLDR-IQHPVLLIANRDDMLVPYTQSLRLAAALPNA-------QLKL 231 (257)
T ss_pred hhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcc-cCccEEEEecCcCcccCHHHHHHHHHhcCCc-------eEEE
Confidence 0000 0000 0111222333344554 7899999999999999999998888776432 2222
Q ss_pred EcCCCCCCCchhhHHHHHHHHHHHHH
Q 004866 696 NLTTDIVEENRYLQCKESALETAFLI 721 (726)
Q Consensus 696 ~~~~gH~~~~~~~~~~~~~~~~~fl~ 721 (726)
.+++||...- ++..+......+||.
T Consensus 232 ~~~~gH~~~~-~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 232 LPYGGHASNV-TDPETFNRALLDFLK 256 (257)
T ss_pred ECCCCCCccc-cCHHHHHHHHHHHhc
Confidence 6899997433 122222333456653
No 69
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.45 E-value=4.7e-11 Score=131.03 Aligned_cols=251 Identities=12% Similarity=0.084 Sum_probs=162.0
Q ss_pred CCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeE
Q 004866 130 SPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDAL 208 (726)
Q Consensus 130 SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~l 208 (726)
.+.+.+++|.....+.....|+++|.+++....++. ......+.|||||+.|+|+.... ...+||++++.++....+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~--~~~~i~v~d~~~g~~~~~ 229 (417)
T TIGR02800 152 GAFSTRIAYVSKSGKSRRYELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFES--GKPEIYVQDLATGQREKV 229 (417)
T ss_pred CCcCCEEEEEEEeCCCCcceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCC--CCcEEEEEECCCCCEEEe
Confidence 456788999876544557889999998776665544 23466789999999999986543 236899999987653222
Q ss_pred EeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecCcccCCC
Q 004866 209 LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDAAKEGQE 287 (726)
Q Consensus 209 v~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~ 287 (726)
. .. .. ....+.|||||+.|++........+||++|+.+ +..+.+..... .....++++|+.|++.++..+
T Consensus 230 ~-~~-~~-~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~--~~~~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g---- 300 (417)
T TIGR02800 230 A-SF-PG-MNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDG--KQLTRLTNGPGIDTEPSWSPDGKSIAFTSDRGG---- 300 (417)
T ss_pred e-cC-CC-CccceEECCCCCEEEEEECCCCCccEEEEECCC--CCEEECCCCCCCCCCEEECCCCCEEEEEECCCC----
Confidence 2 11 11 122478999999999987776678999999987 34455544322 224567789999999887653
Q ss_pred CCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccC
Q 004866 288 ADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPL 367 (726)
Q Consensus 288 ~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (726)
...|+.+++. . ..++.+........-..+...++.|++....++..+|+++++.++. + ..+..
T Consensus 301 --~~~iy~~d~~-~---~~~~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~----~-------~~l~~ 363 (417)
T TIGR02800 301 --SPQIYMMDAD-G---GEVRRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG----E-------RVLTD 363 (417)
T ss_pred --CceEEEEECC-C---CCEEEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC----e-------EEccC
Confidence 2468888876 2 3445554332222222445556788888777777899999986532 1 11111
Q ss_pred CCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEE
Q 004866 368 PKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNII 413 (726)
Q Consensus 368 p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~ 413 (726)
+... ....+++++..+++....... ..++.++...+..+.+
T Consensus 364 ~~~~----~~p~~spdg~~l~~~~~~~~~-~~l~~~~~~g~~~~~~ 404 (417)
T TIGR02800 364 TGLD----ESPSFAPNGRMILYATTRGGR-GVLGLVSTDGRFRARL 404 (417)
T ss_pred CCCC----CCceECCCCCEEEEEEeCCCc-EEEEEEECCCceeeEC
Confidence 1111 122456788888777665443 5777777655444443
No 70
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.43 E-value=3.6e-12 Score=126.05 Aligned_cols=188 Identities=12% Similarity=0.033 Sum_probs=107.3
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHH-HHHHCCcEEEEEccCC---CCCCCC---cccccccccCC-CCcHHHHHH----
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELK-SLLDRGWVVAFADVRG---GGGGGK---KWHHDGRRTKK-LNSIKDFIS---- 559 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~v~~~d~RG---~g~~g~---~~~~~~~~~~~-~~~~~D~~~---- 559 (726)
+..|+||++||- |..- ..+..... .+......++.|+-+- ....|. +|+........ ....+++..
T Consensus 12 ~~~~lvi~LHG~-G~~~-~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 12 KAKPLVILLHGY-GDSE-DLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp T-SEEEEEE--T-TS-H-HHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCceEEEEECCC-CCCc-chhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 467999999984 4322 22222222 1223577788776542 112233 78754322221 122333332
Q ss_pred ---HHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChh
Q 004866 560 ---CARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDID 636 (726)
Q Consensus 560 ---~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~ 636 (726)
.++.+++.+ ++++||++.|.|.||.|++.++.++|+.|.++|+.+|.+-.... + ..
T Consensus 90 l~~li~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~---------------~--~~--- 148 (216)
T PF02230_consen 90 LDELIDEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE---------------L--ED--- 148 (216)
T ss_dssp HHHHHHHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---------------C--HC---
T ss_pred HHHHHHHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---------------c--cc---
Confidence 233333334 89999999999999999999999999999999998886532210 0 00
Q ss_pred HHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCCchhhHHHHHH
Q 004866 637 DFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESA 714 (726)
Q Consensus 637 ~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~ 714 (726)
......+.|++++||..|+.||...+++.++.|++++. .+.+ |++.||.. ..++..
T Consensus 149 ------------~~~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~-----~v~~~~~~g~gH~i-----~~~~~~ 206 (216)
T PF02230_consen 149 ------------RPEALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGA-----NVEFHEYPGGGHEI-----SPEELR 206 (216)
T ss_dssp ------------CHCCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT------GEEEEEETT-SSS-------HHHHH
T ss_pred ------------cccccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCC-----CEEEEEcCCCCCCC-----CHHHHH
Confidence 00111257999999999999999999999999999884 3444 88899964 335666
Q ss_pred HHHHHHHHhh
Q 004866 715 LETAFLIKMM 724 (726)
Q Consensus 715 ~~~~fl~~~l 724 (726)
+..+||.+++
T Consensus 207 ~~~~~l~~~~ 216 (216)
T PF02230_consen 207 DLREFLEKHI 216 (216)
T ss_dssp HHHHHHHHH-
T ss_pred HHHHHHhhhC
Confidence 6779998764
No 71
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.42 E-value=4.6e-12 Score=115.15 Aligned_cols=197 Identities=14% Similarity=0.216 Sum_probs=128.9
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEE--EcCCCCCCCCcc-chHHHHHHHHCCcEEEEEccCCCCCCCCccc
Q 004866 466 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLH--GHGAYGELLDKR-WRSELKSLLDRGWVVAFADVRGGGGGGKKWH 542 (726)
Q Consensus 466 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~--~hGg~~~~~~~~-~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 542 (726)
..+.+...-| .+.+. +-|.+ . ...|+.|. .|--+++.+.+. -......|.++||+++.+|+||-|.+
T Consensus 5 ~~v~i~Gp~G-~le~~-~~~~~-~--~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S----- 74 (210)
T COG2945 5 PTVIINGPAG-RLEGR-YEPAK-T--PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRS----- 74 (210)
T ss_pred CcEEecCCcc-cceec-cCCCC-C--CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccc-----
Confidence 4466777766 45553 33333 2 23455554 444444444332 23445778889999999999999987
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCC
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLI 622 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~ 622 (726)
+|..+.|..+.+|..++++||.++.- +..-..+.|.|.|+++++.++.+.|+. ...++..|.++...+
T Consensus 75 -~G~fD~GiGE~~Da~aaldW~~~~hp-~s~~~~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~~df--------- 142 (210)
T COG2945 75 -QGEFDNGIGELEDAAAALDWLQARHP-DSASCWLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINAYDF--------- 142 (210)
T ss_pred -cCcccCCcchHHHHHHHHHHHHhhCC-CchhhhhcccchHHHHHHHHHHhcccc-cceeeccCCCCchhh---------
Confidence 45556678899999999999998743 222347899999999999999988774 344555565541100
Q ss_pred hhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCC
Q 004866 623 AADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIV 702 (726)
Q Consensus 623 ~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~ 702 (726)
| .+.. ...|.++|+|..|+.|.+....++++. +. .+++..++++|+
T Consensus 143 ----------------------s---~l~P-~P~~~lvi~g~~Ddvv~l~~~l~~~~~-~~-------~~~i~i~~a~HF 188 (210)
T COG2945 143 ----------------------S---FLAP-CPSPGLVIQGDADDVVDLVAVLKWQES-IK-------ITVITIPGADHF 188 (210)
T ss_pred ----------------------h---hccC-CCCCceeEecChhhhhcHHHHHHhhcC-CC-------CceEEecCCCce
Confidence 0 0111 356889999999999988888887665 21 233337999999
Q ss_pred CCchhhHHHHHHHHHHHH
Q 004866 703 EENRYLQCKESALETAFL 720 (726)
Q Consensus 703 ~~~~~~~~~~~~~~~~fl 720 (726)
+..+-..+. ..+.+||
T Consensus 189 F~gKl~~l~--~~i~~~l 204 (210)
T COG2945 189 FHGKLIELR--DTIADFL 204 (210)
T ss_pred ecccHHHHH--HHHHHHh
Confidence 866322222 2245666
No 72
>PRK11071 esterase YqiA; Provisional
Probab=99.42 E-value=4.9e-12 Score=121.79 Aligned_cols=183 Identities=14% Similarity=0.020 Sum_probs=114.1
Q ss_pred cEEEEEcCCCCCCCCccchH--HHHHHHH--CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 495 PGLLHGHGAYGELLDKRWRS--ELKSLLD--RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~--~~~~l~~--~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
|.||++||..++. ..|.. ....|.+ .+|.|+.+|.||++ ++..+.+..++++.
T Consensus 2 p~illlHGf~ss~--~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~-------------------~~~~~~l~~l~~~~-- 58 (190)
T PRK11071 2 STLLYLHGFNSSP--RSAKATLLKNWLAQHHPDIEMIVPQLPPYP-------------------ADAAELLESLVLEH-- 58 (190)
T ss_pred CeEEEECCCCCCc--chHHHHHHHHHHHHhCCCCeEEeCCCCCCH-------------------HHHHHHHHHHHHHc--
Confidence 6899999965543 23443 2344544 38999999999863 24555666666542
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCccccc
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNI 650 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i 650 (726)
+.+++.++|+|+||++++.++.++|. + +|+.+|.++.......- .......+..-..+.+.+.++.++++.+.. +
T Consensus 59 ~~~~~~lvG~S~Gg~~a~~~a~~~~~--~-~vl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~-i 133 (190)
T PRK11071 59 GGDPLGLVGSSLGGYYATWLSQCFML--P-AVVVNPAVRPFELLTDY-LGENENPYTGQQYVLESRHIYDLKVMQIDP-L 133 (190)
T ss_pred CCCCeEEEEECHHHHHHHHHHHHcCC--C-EEEECCCCCHHHHHHHh-cCCcccccCCCcEEEcHHHHHHHHhcCCcc-C
Confidence 23689999999999999999999884 3 46777777643211100 000000010001112334555566555444 3
Q ss_pred ccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHH
Q 004866 651 QKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFL 720 (726)
Q Consensus 651 ~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 720 (726)
. ...|++++||..|..||+.++.+++++.+ .+ ++++++|.+.+.+ +....+.+||
T Consensus 134 ~--~~~~v~iihg~~De~V~~~~a~~~~~~~~---------~~-~~~ggdH~f~~~~---~~~~~i~~fl 188 (190)
T PRK11071 134 E--SPDLIWLLQQTGDEVLDYRQAVAYYAACR---------QT-VEEGGNHAFVGFE---RYFNQIVDFL 188 (190)
T ss_pred C--ChhhEEEEEeCCCCcCCHHHHHHHHHhcc---------eE-EECCCCcchhhHH---HhHHHHHHHh
Confidence 3 46678899999999999999999998431 22 3699999885542 2333445665
No 73
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.41 E-value=1.1e-10 Score=128.02 Aligned_cols=242 Identities=10% Similarity=0.056 Sum_probs=151.3
Q ss_pred CCEEEEEEeCCC-CcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEe
Q 004866 133 HKFLAYTMYDKD-NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLL 210 (726)
Q Consensus 133 G~~la~~~~~~g-~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~ 210 (726)
+++|||+....+ ...++|+++|.+++....++. ...+..+.|||||+.|+|+..+. ...+||++++.+++...+.
T Consensus 168 ~~ria~v~~~~~~~~~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~--~~~~i~i~dl~tg~~~~l~- 244 (429)
T PRK01742 168 RTRIAYVVQKNGGSQPYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFEN--KKSQLVVHDLRSGARKVVA- 244 (429)
T ss_pred CCEEEEEEEEcCCCceEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecC--CCcEEEEEeCCCCceEEEe-
Confidence 688999876543 346899999998877655544 34578899999999999987543 2457999999876533322
Q ss_pred eecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCEEEEEecCcccCCCCC
Q 004866 211 EESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGFLYLFTDAAKEGQEAD 289 (726)
Q Consensus 211 ~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~l~~~t~~~~~~~~~~ 289 (726)
.... ....+.|||||++|++.....+..+||++|+.+ +..+.++.... .....+++||+.+++.++..+
T Consensus 245 ~~~g--~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~--~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g------ 314 (429)
T PRK01742 245 SFRG--HNGAPAFSPDGSRLAFASSKDGVLNIYVMGANG--GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSG------ 314 (429)
T ss_pred cCCC--ccCceeECCCCCEEEEEEecCCcEEEEEEECCC--CCeEeeccCCCCcCCEEECCCCCEEEEEECCCC------
Confidence 1111 123578999999999987666667899999977 44566655432 335678899999999987654
Q ss_pred CeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCC
Q 004866 290 NHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPK 369 (726)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~ 369 (726)
+.+|+.++.. . . ...++... .. ...+.+.++.|++... ..++++|+.++. ...+ .-+.
T Consensus 315 ~~~I~~~~~~-~---~-~~~~l~~~-~~-~~~~SpDG~~ia~~~~----~~i~~~Dl~~g~---~~~l--------t~~~ 372 (429)
T PRK01742 315 SPQVYRMSAS-G---G-GASLVGGR-GY-SAQISADGKTLVMING----DNVVKQDLTSGS---TEVL--------SSTF 372 (429)
T ss_pred CceEEEEECC-C---C-CeEEecCC-CC-CccCCCCCCEEEEEcC----CCEEEEECCCCC---eEEe--------cCCC
Confidence 3578888765 2 1 12233222 12 1245566677776643 346677876542 0111 1000
Q ss_pred ceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 370 YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
.. ....+++++..+++..+ ...-..++.++...+..+.+.
T Consensus 373 ~~----~~~~~sPdG~~i~~~s~-~g~~~~l~~~~~~G~~~~~l~ 412 (429)
T PRK01742 373 LD----ESPSISPNGIMIIYSST-QGLGKVLQLVSADGRFKARLP 412 (429)
T ss_pred CC----CCceECCCCCEEEEEEc-CCCceEEEEEECCCCceEEcc
Confidence 00 12345677877766543 333345566666555455553
No 74
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.41 E-value=2.5e-11 Score=125.19 Aligned_cols=104 Identities=23% Similarity=0.157 Sum_probs=78.1
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 573 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 573 (726)
.|+||++||..+.. ..|......|. ++|.|+.+|+||+|.+.... ....+++++.+.+..++++- +.+
T Consensus 28 ~~~vv~~hG~~~~~--~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~~-------~~~~~~~~~~~~l~~~i~~~--~~~ 95 (278)
T TIGR03056 28 GPLLLLLHGTGAST--HSWRDLMPPLA-RSFRVVAPDLPGHGFTRAPF-------RFRFTLPSMAEDLSALCAAE--GLS 95 (278)
T ss_pred CCeEEEEcCCCCCH--HHHHHHHHHHh-hCcEEEeecCCCCCCCCCcc-------ccCCCHHHHHHHHHHHHHHc--CCC
Confidence 47899999975532 45666666664 47999999999998753221 11346778877777777642 336
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccc
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 609 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 609 (726)
++.|+|+|+||.+++.++.++|++++++|+.++...
T Consensus 96 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~ 131 (278)
T TIGR03056 96 PDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALM 131 (278)
T ss_pred CceEEEECccHHHHHHHHHhCCcccceEEEEcCccc
Confidence 789999999999999999999999998888776543
No 75
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.40 E-value=1.5e-11 Score=128.06 Aligned_cols=109 Identities=21% Similarity=0.203 Sum_probs=80.8
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 573 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 573 (726)
.|.||++||..++. ..|......|.++ |.|+++|.||+|.+...-... .......+++|+...+..++++-. .+
T Consensus 29 ~~~vlllHG~~~~~--~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~-~~~~~~~~~~~~a~~l~~~l~~l~--~~ 102 (294)
T PLN02824 29 GPALVLVHGFGGNA--DHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRS-APPNSFYTFETWGEQLNDFCSDVV--GD 102 (294)
T ss_pred CCeEEEECCCCCCh--hHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCcccc-ccccccCCHHHHHHHHHHHHHHhc--CC
Confidence 37899999976654 4678888888776 699999999999764320000 000123467777777776665432 37
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
++.++|||+||.+++.++.++|++++++|+.+|..
T Consensus 103 ~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 103 PAFVICNSVGGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred CeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCc
Confidence 89999999999999999999999999999988754
No 76
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.40 E-value=1.2e-10 Score=124.05 Aligned_cols=242 Identities=14% Similarity=0.095 Sum_probs=149.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccccc-------------------ccceeEEecCCCEEEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAV-------------------RVSNIAWAKDGQALIYV 184 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~-------------------~~~~~~WspDg~~l~y~ 184 (726)
+..+.|||||++|||+.+ + +||+.++.+++.++++..+ ....+.|||||++|+|.
T Consensus 45 ~~~~~~sP~g~~~~~v~~--~----nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~ 118 (353)
T PF00930_consen 45 LQDAKWSPDGKYIAFVRD--N----NLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFL 118 (353)
T ss_dssp BSEEEE-SSSTEEEEEET--T----EEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEE
T ss_pred cccceeecCCCeeEEEec--C----ceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEE
Confidence 456789999999999963 2 5999999999887766421 23568899999999999
Q ss_pred EecCCCC-------------------------------CceEEEEEcCCCCceeEEee---ecCCceEEEEEEcCCCcEE
Q 004866 185 VTDQNKR-------------------------------PYQIYCSIIGSTDEDALLLE---ESNENVYVNIRHTKDFHFV 230 (726)
Q Consensus 185 ~~~~~~~-------------------------------~~~l~~~~l~t~~~~~lv~~---~~d~~~~~~~~~s~Dg~~l 230 (726)
+.|+..- ..+|+++++.+++...+-.. .....+...+.|++|++.|
T Consensus 119 ~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l 198 (353)
T PF00930_consen 119 RFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRL 198 (353)
T ss_dssp EEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEE
T ss_pred EECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEE
Confidence 8876420 02466677766653222211 2344566789999999955
Q ss_pred EEEE-cCCC-ceEEEEEeCCCCCCCeEEeeccC-Cc-----eEEee-eecCCEEEEEecCcccCCCCCCeEEEEeeCCCC
Q 004866 231 CVHT-FSTT-SSKVFLINAADPFSGLTLIWECE-GL-----AHCIV-EHHEGFLYLFTDAAKEGQEADNHYLLRCPVDAS 301 (726)
Q Consensus 231 ~~~~-~~~~-~~~l~~~d~~~~~~~~~~l~~~~-~~-----~~~~~-~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~ 301 (726)
++.. ++.. ...++++|+.++. .+.+.... .+ ....+ .++++.+++++.+++ -..|+.++.+ .
T Consensus 199 ~~~~~nR~q~~~~l~~~d~~tg~--~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G------~~hly~~~~~-~ 269 (353)
T PF00930_consen 199 WVQWLNRDQNRLDLVLCDASTGE--TRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDG------YRHLYLYDLD-G 269 (353)
T ss_dssp EEEEEETTSTEEEEEEEEECTTT--CEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTS------SEEEEEEETT-S
T ss_pred EEEEcccCCCEEEEEEEECCCCc--eeEEEEecCCcceeeecccccccCCCCEEEEEEEcCC------CcEEEEEccc-c
Confidence 5544 4443 4788899998743 33333221 11 11222 267888888888654 2678998886 2
Q ss_pred CCCCCceEEeecCCCc-eEEEEeeeCCEEEEEEEeCC--eeEEEEEecC-CCCCCcceeecccccccccCCCce-eeeec
Q 004866 302 FPSRTWESVFIDDQGL-VVEDVDFCKTHMALILREGR--TYRLCSVSLP-LPAGKGVVHLKELHPHFLPLPKYV-SQIVP 376 (726)
Q Consensus 302 ~~~~~~~~v~~~~~~~-~l~~~~~~~~~lv~~~~~~g--~~~l~~~~l~-~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~ 376 (726)
+..+.|+.+..++ .+..++..++.|+++...++ ..+|++++++ .+. .. .+.-.... .++
T Consensus 270 ---~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~---~~--------~LT~~~~~~~~~-- 333 (353)
T PF00930_consen 270 ---GKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGE---PK--------CLTCEDGDHYSA-- 333 (353)
T ss_dssp ---SEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTE---EE--------ESSTTSSTTEEE--
T ss_pred ---cceeccccCceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCC---eE--------eccCCCCCceEE--
Confidence 2234444444333 34556666789999887743 5689999987 332 11 12211111 122
Q ss_pred CCCCcCCCcEEEEEEccCCCCc
Q 004866 377 GPNYDYYSSTMRFAISSPVMPD 398 (726)
Q Consensus 377 ~~~~~~~~~~~~~~~ss~~~P~ 398 (726)
.++++++.++.+++++.+|+
T Consensus 334 --~~Spdg~y~v~~~s~~~~P~ 353 (353)
T PF00930_consen 334 --SFSPDGKYYVDTYSGPDTPP 353 (353)
T ss_dssp --EE-TTSSEEEEEEESSSSCE
T ss_pred --EECCCCCEEEEEEcCCCCCC
Confidence 34678999999999999995
No 77
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.39 E-value=3.6e-11 Score=125.36 Aligned_cols=114 Identities=16% Similarity=0.098 Sum_probs=84.6
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCC
Q 004866 473 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 552 (726)
Q Consensus 473 ~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 552 (726)
.+|.++.+... +..|.||++||.+++. ..|......|++++ .|+++|.||+|.+...- ...
T Consensus 14 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~--~~w~~~~~~L~~~~-~via~D~~G~G~S~~~~--------~~~ 74 (295)
T PRK03592 14 VLGSRMAYIET--------GEGDPIVFLHGNPTSS--YLWRNIIPHLAGLG-RCLAPDLIGMGASDKPD--------IDY 74 (295)
T ss_pred ECCEEEEEEEe--------CCCCEEEEECCCCCCH--HHHHHHHHHHhhCC-EEEEEcCCCCCCCCCCC--------CCC
Confidence 37777664321 1237899999987644 46777778888886 99999999999764321 113
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 553 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
++++..+.+..++++- ..+++.++|+|+||.+++.++.++|++++++|+.+++
T Consensus 75 ~~~~~a~dl~~ll~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 75 TFADHARYLDAWFDAL--GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAI 127 (295)
T ss_pred CHHHHHHHHHHHHHHh--CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCC
Confidence 5666666666665542 3378999999999999999999999999999998874
No 78
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.39 E-value=6.9e-12 Score=120.86 Aligned_cols=169 Identities=17% Similarity=0.090 Sum_probs=118.2
Q ss_pred CCCcEEEEEEEEcCCCCCCCCc-cEEEEEcCCCCCCCCccchHH-----HHHH--HHCCcEEEEEccCCCCCCCCccccc
Q 004866 473 HDGISVPLTIIYSPKYKKENQN-PGLLHGHGAYGELLDKRWRSE-----LKSL--LDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 473 ~dG~~i~~~l~~p~~~~~~~~~-P~vl~~hGg~~~~~~~~~~~~-----~~~l--~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
.-|.+|++.++.|++..+++++ |++|+.||+-....+. .... ...+ -+-++.|++|.|- .-|...
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn-~~~l~sg~gaiawa~pedqcfVlAPQy~------~if~d~ 241 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDN-DKVLSSGIGAIAWAGPEDQCFVLAPQYN------PIFADS 241 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchh-hhhhhcCccceeeecccCceEEEccccc------cccccc
Confidence 4677999999999999999888 9999999964433211 1110 0111 1235666666632 111111
Q ss_pred ccccCCCCcHHHHHHHHH-HHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCCh
Q 004866 545 GRRTKKLNSIKDFISCAR-FLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIA 623 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~ 623 (726)
..+-.+...-.++.++ -|.++..+|.+||.+.|.|+||+++.+++.++|+.|+|++..+|--|-
T Consensus 242 --e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~------------- 306 (387)
T COG4099 242 --EEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDR------------- 306 (387)
T ss_pred --ccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCch-------------
Confidence 1122234455556665 677788899999999999999999999999999999999987773221
Q ss_pred hhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCC
Q 004866 624 ADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTI 686 (726)
Q Consensus 624 ~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~ 686 (726)
+ ..++...+.|.-++|+..|..+|.+.|.-.+++|++.+.
T Consensus 307 --------v---------------~lv~~lk~~piWvfhs~dDkv~Pv~nSrv~y~~lk~~~~ 346 (387)
T COG4099 307 --------V---------------YLVRTLKKAPIWVFHSSDDKVIPVSNSRVLYERLKALDR 346 (387)
T ss_pred --------h---------------hhhhhhccCceEEEEecCCCccccCcceeehHHHHhhcc
Confidence 0 011222467889999999999999999999999998763
No 79
>PLN02965 Probable pheophorbidase
Probab=99.39 E-value=3.2e-11 Score=122.76 Aligned_cols=101 Identities=20% Similarity=0.191 Sum_probs=77.8
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC-Cc
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE-HK 574 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~-~r 574 (726)
+||++||..... ..|...+..|.++||.|+.+|+||+|.+... .....+++++.+.+..+++. .+. ++
T Consensus 5 ~vvllHG~~~~~--~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~~~~~ 73 (255)
T PLN02965 5 HFVFVHGASHGA--WCWYKLATLLDAAGFKSTCVDLTGAGISLTD-------SNTVSSSDQYNRPLFALLSD--LPPDHK 73 (255)
T ss_pred EEEEECCCCCCc--CcHHHHHHHHhhCCceEEEecCCcCCCCCCC-------ccccCCHHHHHHHHHHHHHh--cCCCCC
Confidence 489999976543 4577788888899999999999999976321 11124567777666666654 222 58
Q ss_pred EEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 575 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
+.++||||||.++..++.++|++++++|+.++.
T Consensus 74 ~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 74 VILVGHSIGGGSVTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred EEEEecCcchHHHHHHHHhCchheeEEEEEccc
Confidence 999999999999999999999999999987764
No 80
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.38 E-value=5.9e-12 Score=127.01 Aligned_cols=191 Identities=19% Similarity=0.166 Sum_probs=115.9
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
..|+||++||..... ..|...+..| .+||.|+.+|+||+|.+... ....++.++.+.+..+++. .+.
T Consensus 12 ~~~~li~~hg~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~--------~~~~~~~~~~~~~~~~i~~--~~~ 78 (251)
T TIGR02427 12 GAPVLVFINSLGTDL--RMWDPVLPAL-TPDFRVLRYDKRGHGLSDAP--------EGPYSIEDLADDVLALLDH--LGI 78 (251)
T ss_pred CCCeEEEEcCcccch--hhHHHHHHHh-hcccEEEEecCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHH--hCC
Confidence 458999999853322 3455555555 57999999999999875321 1224677777777777654 244
Q ss_pred CcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccc--c-------cCCCCC-CCh----hhh-cccCCCCCh--
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT--L-------LYPILP-LIA----ADY-EEFGYPGDI-- 635 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~--~-------~~~~~~-~~~----~~~-~~~g~~~~~-- 635 (726)
+++.++|+|+||++++.++.++|++++++|+.++...+... . ...... ... .++ ..+..+...
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARL 158 (251)
T ss_pred CceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHH
Confidence 78999999999999999999999999998877654322110 0 000000 000 000 001111100
Q ss_pred hHH----------------HHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCC
Q 004866 636 DDF----------------HAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTT 699 (726)
Q Consensus 636 ~~~----------------~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 699 (726)
+.+ ..+...+....+.+ ++.|+++++|..|..+|.+...++.+.+... + +..++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~~------~-~~~~~~~ 230 (251)
T TIGR02427 159 DLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGA-IAVPTLCIAGDQDGSTPPELVREIADLVPGA------R-FAEIRGA 230 (251)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhh-cCCCeEEEEeccCCcCChHHHHHHHHhCCCc------e-EEEECCC
Confidence 000 01111112233443 7899999999999999998888777766431 2 2226899
Q ss_pred CCCCC
Q 004866 700 DIVEE 704 (726)
Q Consensus 700 gH~~~ 704 (726)
||...
T Consensus 231 gH~~~ 235 (251)
T TIGR02427 231 GHIPC 235 (251)
T ss_pred CCccc
Confidence 99643
No 81
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=99.38 E-value=5.1e-11 Score=127.80 Aligned_cols=206 Identities=14% Similarity=0.043 Sum_probs=142.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+..++|||||+.++|..-..+. ...++++|+++|+...+.. ......+.|||||+.|+|+.... ...+||.+|+.+
T Consensus 195 ~~~p~ws~~~~~~~y~~f~~~~-~~~i~~~~l~~g~~~~i~~~~g~~~~P~fspDG~~l~f~~~rd--g~~~iy~~dl~~ 271 (425)
T COG0823 195 ILTPAWSPDGKKLAYVSFELGG-CPRIYYLDLNTGKRPVILNFNGNNGAPAFSPDGSKLAFSSSRD--GSPDIYLMDLDG 271 (425)
T ss_pred eeccccCcCCCceEEEEEecCC-CceEEEEeccCCccceeeccCCccCCccCCCCCCEEEEEECCC--CCccEEEEcCCC
Confidence 4456899999999998654332 3789999999997655443 55667899999999999986543 456899999988
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCce-EEeeeecCCEEEEEecC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~ 281 (726)
....++.-. . .....+.|||||++|+|.+.+.+..+||++++++ ...+.++...... ...+++||+.+.|.+-.
T Consensus 272 ~~~~~Lt~~--~-gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g--~~~~riT~~~~~~~~p~~SpdG~~i~~~~~~ 346 (425)
T COG0823 272 KNLPRLTNG--F-GINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEG--SQVTRLTFSGGGNSNPVWSPDGDKIVFESSS 346 (425)
T ss_pred CcceecccC--C-ccccCccCCCCCCEEEEEeCCCCCcceEEECCCC--CceeEeeccCCCCcCccCCCCCCEEEEEecc
Confidence 764443321 1 1223688999999999999999999999999998 4456666554433 45688999999998833
Q ss_pred cccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 282 AKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 282 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
.+ ...++..++. .. ..|+.+. .........+...+..+++.....+.+.+...+++
T Consensus 347 ~g------~~~i~~~~~~-~~--~~~~~lt-~~~~~e~ps~~~ng~~i~~~s~~~~~~~l~~~s~~ 402 (425)
T COG0823 347 GG------QWDIDKNDLA-SG--GKIRILT-STYLNESPSWAPNGRMIMFSSGQGGGSVLSLVSLD 402 (425)
T ss_pred CC------ceeeEEeccC-CC--CcEEEcc-ccccCCCCCcCCCCceEEEeccCCCCceEEEeecc
Confidence 22 2557777664 21 2255442 22212223444455666666666667777777654
No 82
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.38 E-value=9.8e-11 Score=117.87 Aligned_cols=207 Identities=15% Similarity=0.057 Sum_probs=130.5
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC--CCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccc
Q 004866 468 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL--LDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG 545 (726)
Q Consensus 468 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~--~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 545 (726)
+.+++..|. +.+++..|.+ .++.|+||++||..+.. ....|......|+++||.|+.+|+||+|.+......
T Consensus 3 ~~l~~~~g~-~~~~~~~p~~---~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~-- 76 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPVA---VGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAA-- 76 (266)
T ss_pred EEecCCCCc-EEEEEecCCC---CCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCcccc--
Confidence 567777775 4455554543 23468999999853322 123355567889999999999999999876432211
Q ss_pred cccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc-----------
Q 004866 546 RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL----------- 614 (726)
Q Consensus 546 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~----------- 614 (726)
. ......+|+.+++++|.+++ ..+|+++|+||||.+++.++.++|+.++++|+.+|++.-...+
T Consensus 77 -~-~~~~~~~Dv~~ai~~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~~~ 151 (266)
T TIGR03101 77 -A-RWDVWKEDVAAAYRWLIEQG---HPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLRLRLVAR 151 (266)
T ss_pred -C-CHHHHHHHHHHHHHHHHhcC---CCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHHHHHHHH
Confidence 0 11124588888999998764 4789999999999999999999999999999999987643221
Q ss_pred -cCCCCCC-----C----hhhhcc-cCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCC-CCcChHHHHHHHHHHH
Q 004866 615 -LYPILPL-----I----AADYEE-FGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFN-TRFGVWEAAKWVARVR 682 (726)
Q Consensus 615 -~~~~~~~-----~----~~~~~~-~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D-~~V~~~~~~~~~~~L~ 682 (726)
.....+. . ....-+ .|..-.++....+.+.....-+.. ..+++++.-..+ ..-....+.++.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 229 (266)
T TIGR03101 152 RLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPK--NCPVHWFEVRPEEGATLSPVFSRLGEQWV 229 (266)
T ss_pred hccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCC--CCceEEEEeccccCCCCCHHHHHHHHHHH
Confidence 0000000 0 000001 133333344444544433322221 345677766544 4445567889999999
Q ss_pred hcCCC
Q 004866 683 ESTIY 687 (726)
Q Consensus 683 ~~~~~ 687 (726)
+.|++
T Consensus 230 ~~g~~ 234 (266)
T TIGR03101 230 QSGVE 234 (266)
T ss_pred HcCCe
Confidence 99964
No 83
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=3e-11 Score=117.74 Aligned_cols=184 Identities=19% Similarity=0.282 Sum_probs=122.9
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEEccCCCCCCCCccccccccc----
Q 004866 474 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRT---- 548 (726)
Q Consensus 474 dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~---- 548 (726)
+|...+++++.|++.+ .+.|+||++||+.+..-......-+..|++ .||.|++|| ++.+.|...+...
T Consensus 43 ~g~~r~y~l~vP~g~~--~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPd-----g~~~~wn~~~~~~~~~p 115 (312)
T COG3509 43 NGLKRSYRLYVPPGLP--SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPD-----GYDRAWNANGCGNWFGP 115 (312)
T ss_pred CCCccceEEEcCCCCC--CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcC-----ccccccCCCcccccCCc
Confidence 5677899999999864 334999999998665422222334567777 599999993 4555664444433
Q ss_pred ----CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc-cccccccCCCCCCCh
Q 004866 549 ----KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL-DATNTLLYPILPLIA 623 (726)
Q Consensus 549 ----~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~-d~~~~~~~~~~~~~~ 623 (726)
.+..++..+.+.+..|+.+.-+||.||.|.|-|.||.|+.+++..+|++|.|+..+++.. +-... ...-|.
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~~~~~a~--~~~rp~-- 191 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLLALGVAC--TPPRPV-- 191 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeecccCCCccc--CCCCch--
Confidence 345678888899999999988999999999999999999999999999999988777765 21110 111111
Q ss_pred hhhccc-CCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhc
Q 004866 624 ADYEEF-GYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRES 684 (726)
Q Consensus 624 ~~~~~~-g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~ 684 (726)
....+ |.+. + ..|++- -..| |-++..|..|+..++.+..+++-..
T Consensus 192 -~~m~~~G~~D-p--------~~p~~g----G~~~--~g~g~~~~~v~~~~~~~~Waa~ng~ 237 (312)
T COG3509 192 -SVMAFHGTAD-P--------LNPYHG----GGVP--IGRGQRDGVVSAADLAARWAAVNGC 237 (312)
T ss_pred -hHHHhcCCCC-C--------CCCCCC----CCcc--cccccccccccHHHHHHHHHHhcCC
Confidence 11111 3222 1 244442 1223 7777888777666666666666443
No 84
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.38 E-value=3.9e-11 Score=123.98 Aligned_cols=107 Identities=21% Similarity=0.141 Sum_probs=76.5
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 573 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 573 (726)
.|.||++||++++.. ..|......+.+.||.|+.+|.||+|.+..... .....+++++.+.+..++++- +..
T Consensus 25 ~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~ 96 (288)
T TIGR01250 25 KIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDD-----SDELWTIDYFVDELEEVREKL--GLD 96 (288)
T ss_pred CCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCc-----ccccccHHHHHHHHHHHHHHc--CCC
Confidence 477899999877542 223333344444599999999999986532100 001245777777777776542 346
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
++.++|+|+||.+++.++.++|++++++|+.+++.
T Consensus 97 ~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 97 KFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred cEEEEEeehHHHHHHHHHHhCccccceeeEecccc
Confidence 79999999999999999999999999999887754
No 85
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.38 E-value=2e-11 Score=127.73 Aligned_cols=123 Identities=19% Similarity=0.134 Sum_probs=85.0
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccccccc
Q 004866 469 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 548 (726)
Q Consensus 469 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~ 548 (726)
++...||.+|.+... + .+ +.+.||++||+++... .......+...+|.|+.+|+||+|.+... ..
T Consensus 8 ~~~~~~~~~l~y~~~---g-~~--~~~~lvllHG~~~~~~---~~~~~~~~~~~~~~vi~~D~~G~G~S~~~------~~ 72 (306)
T TIGR01249 8 YLNVSDNHQLYYEQS---G-NP--DGKPVVFLHGGPGSGT---DPGCRRFFDPETYRIVLFDQRGCGKSTPH------AC 72 (306)
T ss_pred eEEcCCCcEEEEEEC---c-CC--CCCEEEEECCCCCCCC---CHHHHhccCccCCEEEEECCCCCCCCCCC------CC
Confidence 466678888765331 2 11 1356889999876542 12233345457999999999999865321 11
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 549 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 549 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
.......|+.+.+..++++- +.+++.++|+||||++++.++.++|++++++|+..++.
T Consensus 73 ~~~~~~~~~~~dl~~l~~~l--~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 73 LEENTTWDLVADIEKLREKL--GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred cccCCHHHHHHHHHHHHHHc--CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeecccc
Confidence 11245677777777777652 34689999999999999999999999999888876543
No 86
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.37 E-value=2.7e-11 Score=124.90 Aligned_cols=222 Identities=16% Similarity=0.140 Sum_probs=129.6
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCC
Q 004866 473 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLN 552 (726)
Q Consensus 473 ~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~ 552 (726)
.+|.++.++.. ++ . ++ .|.||++||..+.. ..|...+..|. .+|.|+++|+||+|.+... ....
T Consensus 9 ~~~~~~~~~~~--~~-~-~~-~~plvllHG~~~~~--~~w~~~~~~L~-~~~~vi~~Dl~G~G~S~~~--------~~~~ 72 (276)
T TIGR02240 9 LDGQSIRTAVR--PG-K-EG-LTPLLIFNGIGANL--ELVFPFIEALD-PDLEVIAFDVPGVGGSSTP--------RHPY 72 (276)
T ss_pred cCCcEEEEEEe--cC-C-CC-CCcEEEEeCCCcch--HHHHHHHHHhc-cCceEEEECCCCCCCCCCC--------CCcC
Confidence 47778776442 11 1 12 35789999864433 35666666654 4799999999999976321 1123
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc------c--ccCCCC----C
Q 004866 553 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN------T--LLYPIL----P 620 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~------~--~~~~~~----~ 620 (726)
.++++.+.+..+++. .+.+++.++|+|+||++++.++.++|++++++|+.++...... . ...... +
T Consensus 73 ~~~~~~~~~~~~i~~--l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (276)
T TIGR02240 73 RFPGLAKLAARMLDY--LDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQP 150 (276)
T ss_pred cHHHHHHHHHHHHHH--hCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhcc
Confidence 566666666666654 2446899999999999999999999999999999887653210 0 000000 0
Q ss_pred CC-----hhhhcc-cC-CCCCh--------------hHHHHHH--hcCcccccccCCCCCeEEEEecCCCCcChHHHHHH
Q 004866 621 LI-----AADYEE-FG-YPGDI--------------DDFHAIR--NYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKW 677 (726)
Q Consensus 621 ~~-----~~~~~~-~g-~~~~~--------------~~~~~~~--~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~ 677 (726)
.. ...+.. +. ++... .....+. .......+.+ ++.|+|+|+|..|..+|+.++.++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~P~lii~G~~D~~v~~~~~~~l 229 (276)
T TIGR02240 151 SHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLGWTSIHWLHK-IQQPTLVLAGDDDPIIPLINMRLL 229 (276)
T ss_pred ccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcCCchhhHhhc-CCCCEEEEEeCCCCcCCHHHHHHH
Confidence 00 000000 00 00000 0000000 0111222444 889999999999999999999888
Q ss_pred HHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHH
Q 004866 678 VARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIK 722 (726)
Q Consensus 678 ~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~ 722 (726)
.+.+... +.++ .+ +||...- +...+......+|+.+
T Consensus 230 ~~~~~~~------~~~~-i~-~gH~~~~-e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 230 AWRIPNA------ELHI-ID-DGHLFLI-TRAEAVAPIIMKFLAE 265 (276)
T ss_pred HHhCCCC------EEEE-Ec-CCCchhh-ccHHHHHHHHHHHHHH
Confidence 8777542 2333 34 5996432 2222333345677765
No 87
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.35 E-value=5.6e-11 Score=123.03 Aligned_cols=125 Identities=18% Similarity=0.136 Sum_probs=87.5
Q ss_pred CceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcc
Q 004866 462 FYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 541 (726)
Q Consensus 462 ~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 541 (726)
.+..+...++. +|.++++. .. ++.|.||++||.+... ..|......| .++|.|+.+|+||+|.++..
T Consensus 11 ~~~~~~~~~~~-~~~~i~y~---~~-----G~~~~iv~lHG~~~~~--~~~~~~~~~l-~~~~~vi~~D~~G~G~S~~~- 77 (286)
T PRK03204 11 LYPFESRWFDS-SRGRIHYI---DE-----GTGPPILLCHGNPTWS--FLYRDIIVAL-RDRFRCVAPDYLGFGLSERP- 77 (286)
T ss_pred cccccceEEEc-CCcEEEEE---EC-----CCCCEEEEECCCCccH--HHHHHHHHHH-hCCcEEEEECCCCCCCCCCC-
Confidence 34344445555 56666532 12 2247899999976422 3455555555 45799999999999976421
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 542 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 542 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
......++++.+.+..++++- +.+++.++|+|+||.++..++..+|++++++|+.++.
T Consensus 78 ------~~~~~~~~~~~~~~~~~~~~~--~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~ 135 (286)
T PRK03204 78 ------SGFGYQIDEHARVIGEFVDHL--GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTW 135 (286)
T ss_pred ------CccccCHHHHHHHHHHHHHHh--CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECcc
Confidence 011246788888888888652 4478999999999999999999999999999987654
No 88
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.35 E-value=8.4e-11 Score=127.78 Aligned_cols=123 Identities=16% Similarity=0.202 Sum_probs=84.3
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHH-HHHHH---HCCcEEEEEccCCCCCCCCcccccccc
Q 004866 472 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSE-LKSLL---DRGWVVAFADVRGGGGGGKKWHHDGRR 547 (726)
Q Consensus 472 s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~-~~~l~---~~G~~v~~~d~RG~g~~g~~~~~~~~~ 547 (726)
+..|.++++..--|++. ...|.||++||..+.. ..|... +..|. ++||.|+.+|+||+|.+...
T Consensus 182 ~~~~~~l~~~~~gp~~~---~~k~~VVLlHG~~~s~--~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p------- 249 (481)
T PLN03087 182 SSSNESLFVHVQQPKDN---KAKEDVLFIHGFISSS--AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKP------- 249 (481)
T ss_pred eeCCeEEEEEEecCCCC---CCCCeEEEECCCCccH--HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCC-------
Confidence 33456777655555431 2247899999986543 345432 23443 47999999999999876322
Q ss_pred cCCCCcHHHHHHHHH-HHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 548 TKKLNSIKDFISCAR-FLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 548 ~~~~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
......++++.+.+. .+++. ...+++.++||||||++++.++.++|++++++|+.+|..
T Consensus 250 ~~~~ytl~~~a~~l~~~ll~~--lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 250 ADSLYTLREHLEMIERSVLER--YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred CCCcCCHHHHHHHHHHHHHHH--cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCc
Confidence 011245677666663 45543 234689999999999999999999999999999988643
No 89
>PLN02872 triacylglycerol lipase
Probab=99.35 E-value=1e-11 Score=132.47 Aligned_cols=145 Identities=21% Similarity=0.244 Sum_probs=96.6
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCC-CCCCccEEEEEcCCCCCCCCcc----chHHHHHHHHCCcEEEEEccCCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPKYK-KENQNPGLLHGHGAYGELLDKR----WRSELKSLLDRGWVVAFADVRGG 534 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~-~~~~~P~vl~~hGg~~~~~~~~----~~~~~~~l~~~G~~v~~~d~RG~ 534 (726)
...|.+|+..+++.||..|...-+.+.... ...+.|.|+++||......... -......|+++||.|.++|.||.
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 457899999999999998887655332211 1133578999999654432111 11234468889999999999998
Q ss_pred CC-CCCcccccc-cc----cCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCC---ceeEEEEeC
Q 004866 535 GG-GGKKWHHDG-RR----TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLEV 605 (726)
Q Consensus 535 g~-~g~~~~~~~-~~----~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~ 605 (726)
+. +|....... .. .+......|+.++++++.+. ..+++.++|||+||.+++.++. +|+ +++++++.+
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~---~~~~v~~VGhS~Gg~~~~~~~~-~p~~~~~v~~~~~l~ 194 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI---TNSKIFIVGHSQGTIMSLAALT-QPNVVEMVEAAALLC 194 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc---cCCceEEEEECHHHHHHHHHhh-ChHHHHHHHHHHHhc
Confidence 63 333222111 11 11122346999999999864 2478999999999999986664 677 567777777
Q ss_pred Ccc
Q 004866 606 PFL 608 (726)
Q Consensus 606 p~~ 608 (726)
|+.
T Consensus 195 P~~ 197 (395)
T PLN02872 195 PIS 197 (395)
T ss_pred chh
Confidence 764
No 90
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.35 E-value=3.7e-11 Score=122.28 Aligned_cols=100 Identities=19% Similarity=0.188 Sum_probs=72.8
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 571 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 571 (726)
...|.||++||.++.. ..|......|. .+|.|+.+|.||+|.+.... ..+++++.+.+..+++. ..
T Consensus 14 ~~~~~iv~lhG~~~~~--~~~~~~~~~l~-~~~~vi~~D~~G~G~s~~~~---------~~~~~~~~~d~~~~l~~--l~ 79 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL--DNLGVLARDLV-NDHDIIQVDMRNHGLSPRDP---------VMNYPAMAQDLLDTLDA--LQ 79 (255)
T ss_pred CCCCCEEEECCCCCch--hHHHHHHHHHh-hCCeEEEECCCCCCCCCCCC---------CCCHHHHHHHHHHHHHH--cC
Confidence 3468899999987653 34666666664 57999999999999764321 12455555444444433 24
Q ss_pred CCcEEEEEecccHHHHHHHHHcCCCceeEEEEeC
Q 004866 572 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEV 605 (726)
Q Consensus 572 ~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 605 (726)
.+++.++|+|+||.+++.++.++|++++++|+..
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~ 113 (255)
T PRK10673 80 IEKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113 (255)
T ss_pred CCceEEEEECHHHHHHHHHHHhCHhhcceEEEEe
Confidence 4679999999999999999999999999998864
No 91
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.33 E-value=4.9e-11 Score=120.05 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=78.2
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHH-HHHHHHcCCCCCC
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISC-ARFLIEKEIVKEH 573 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~l~~~~~~d~~ 573 (726)
|+||++||..+.. ..|......|+ +||.|+.+|.||+|.+... ......+++++... +..+.+. .+.+
T Consensus 2 ~~vv~~hG~~~~~--~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~~ 70 (251)
T TIGR03695 2 PVLVFLHGFLGSG--ADWQALIELLG-PHFRCLAIDLPGHGSSQSP------DEIERYDFEEAAQDILATLLDQ--LGIE 70 (251)
T ss_pred CEEEEEcCCCCch--hhHHHHHHHhc-ccCeEEEEcCCCCCCCCCC------CccChhhHHHHHHHHHHHHHHH--cCCC
Confidence 7899999976543 45777777887 8999999999999876321 11123456666655 5555543 2457
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccc
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLD 609 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d 609 (726)
++.++|||+||.+++.++.++|+.++++++.++...
T Consensus 71 ~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 71 PFFLVGYSMGGRIALYYALQYPERVQGLILESGSPG 106 (251)
T ss_pred eEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCC
Confidence 899999999999999999999999999998887644
No 92
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.32 E-value=1.2e-10 Score=115.66 Aligned_cols=238 Identities=20% Similarity=0.183 Sum_probs=139.3
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccccccc
Q 004866 469 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT 548 (726)
Q Consensus 469 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~ 548 (726)
.+...||--+.....-++ .+.+.|+||..||--|+...+.-......+.++||.|+++|.||.++.-.. ....
T Consensus 53 ~v~~pdg~~~~ldw~~~p---~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~----~p~~ 125 (345)
T COG0429 53 RLETPDGGFIDLDWSEDP---RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANT----SPRL 125 (345)
T ss_pred EEEcCCCCEEEEeeccCc---cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCccc----Ccce
Confidence 445556655554444332 234569999999976665444223455777889999999999999864210 1111
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccH-HHHHHHHHcCCC-ceeEEEEeCCccccccc----------c--
Q 004866 549 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGG-LLVAAAINCCPD-LFRAVVLEVPFLDATNT----------L-- 614 (726)
Q Consensus 549 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG-~l~~~~~~~~p~-~f~a~v~~~p~~d~~~~----------~-- 614 (726)
......+|+..++++|.++.. +.++.++|.|+|| .|+.++..+.-+ ...|+++.+-.+|+... .
T Consensus 126 yh~G~t~D~~~~l~~l~~~~~--~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly 203 (345)
T COG0429 126 YHSGETEDIRFFLDWLKARFP--PRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLY 203 (345)
T ss_pred ecccchhHHHHHHHHHHHhCC--CCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhh
Confidence 223456999999999998643 5799999999999 555555543222 23444444433333210 0
Q ss_pred ------------------cCCCCCCCh-------hhhcccC----CCC--ChhHHHHHHhcCcccccccCCCCCeEEEEe
Q 004866 615 ------------------LYPILPLIA-------ADYEEFG----YPG--DIDDFHAIRNYSPYDNIQKDVLYPAVLVTS 663 (726)
Q Consensus 615 ------------------~~~~~~~~~-------~~~~~~g----~~~--~~~~~~~~~~~sp~~~i~~~~~~P~lli~g 663 (726)
+....|... .-..||- .|. -++..++|++-|++..+.+ |+.|+|+||+
T Consensus 204 ~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~-Ir~PtLii~A 282 (345)
T COG0429 204 SRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPK-IRKPTLIINA 282 (345)
T ss_pred HHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhccccccccc-cccceEEEec
Confidence 001122110 0011221 111 1235688999999999997 9999999999
Q ss_pred cCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCC-CCc-hhhHH--HHHHHHHHHHHHhh
Q 004866 664 SFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIV-EEN-RYLQC--KESALETAFLIKMM 724 (726)
Q Consensus 664 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~-~~~-~~~~~--~~~~~~~~fl~~~l 724 (726)
..|+.+++..--+.-.. .. .-+++ -..+||. +.+ +..+. =...++.+||...+
T Consensus 283 ~DDP~~~~~~iP~~~~~---~n-----p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~ 341 (345)
T COG0429 283 KDDPFMPPEVIPKLQEM---LN-----PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFL 341 (345)
T ss_pred CCCCCCChhhCCcchhc---CC-----CceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHH
Confidence 99999987543332221 11 12233 5678994 222 22222 12345688887664
No 93
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.32 E-value=3.2e-12 Score=126.66 Aligned_cols=188 Identities=16% Similarity=0.171 Sum_probs=117.9
Q ss_pred EEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEE
Q 004866 497 LLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLA 576 (726)
Q Consensus 497 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~ 576 (726)
||++||..+.. ..|......| ++||.|+.+|+||.|.+...- .....++++..+.+..++++- ..+++.
T Consensus 1 vv~~hG~~~~~--~~~~~~~~~l-~~~~~v~~~d~~G~G~s~~~~------~~~~~~~~~~~~~l~~~l~~~--~~~~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSS--ESWDPLAEAL-ARGYRVIAFDLPGHGRSDPPP------DYSPYSIEDYAEDLAELLDAL--GIKKVI 69 (228)
T ss_dssp EEEE-STTTTG--GGGHHHHHHH-HTTSEEEEEECTTSTTSSSHS------SGSGGSHHHHHHHHHHHHHHT--TTSSEE
T ss_pred eEEECCCCCCH--HHHHHHHHHH-hCCCEEEEEecCCcccccccc------ccCCcchhhhhhhhhhccccc--cccccc
Confidence 68999976654 5678888877 589999999999998764321 122346677777666666542 227899
Q ss_pred EEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc--------cCCCCCCCh---hhh--cccCCCCChhH------
Q 004866 577 GWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL--------LYPILPLIA---ADY--EEFGYPGDIDD------ 637 (726)
Q Consensus 577 i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~--------~~~~~~~~~---~~~--~~~g~~~~~~~------ 637 (726)
++|+|+||.+++.++.++|++++++|+.+|........ ...-..... ... ..+......+.
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIR 149 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeecccccccccccccccchhhhhhhhcccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999988543210 000000000 000 00000000000
Q ss_pred ------HHHH----HhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCC
Q 004866 638 ------FHAI----RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVE 703 (726)
Q Consensus 638 ------~~~~----~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~ 703 (726)
.+.+ ...++...+.. ++.|+++++|..|..++.....++.+.+... .+..++++||..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~~-------~~~~~~~~gH~~ 217 (228)
T PF12697_consen 150 SSRRALAEYLRSNLWQADLSEALPR-IKVPVLVIHGEDDPIVPPESAEELADKLPNA-------ELVVIPGAGHFL 217 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHG-SSSEEEEEEETTSSSSHHHHHHHHHHHSTTE-------EEEEETTSSSTH
T ss_pred ccccccccccccccccccccccccc-cCCCeEEeecCCCCCCCHHHHHHHHHHCCCC-------EEEEECCCCCcc
Confidence 0111 11222244454 7899999999999999877777776665431 222378999963
No 94
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.31 E-value=6.9e-11 Score=126.11 Aligned_cols=108 Identities=20% Similarity=0.206 Sum_probs=77.1
Q ss_pred CccEEEEEcCCCCCC---CCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCc--HHHHHHHHHHHHHc
Q 004866 493 QNPGLLHGHGAYGEL---LDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNS--IKDFISCARFLIEK 567 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~---~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~--~~D~~~~~~~l~~~ 567 (726)
+.| ||.+||-.... ....+...+..|+++||.|+++|+||+|..... ..... .+|+.++++++.++
T Consensus 62 ~~p-vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~--------~~~~d~~~~~~~~~v~~l~~~ 132 (350)
T TIGR01836 62 KTP-LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRY--------LTLDDYINGYIDKCVDYICRT 132 (350)
T ss_pred CCc-EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhc--------CCHHHHHHHHHHHHHHHHHHH
Confidence 345 77778732111 111234678889999999999999997743211 11112 23467788888865
Q ss_pred CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccc
Q 004866 568 EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 568 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~ 611 (726)
. ..+++.++|||+||.+++.++..+|+.++++|+.+|.++..
T Consensus 133 ~--~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 133 S--KLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred h--CCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 3 34789999999999999999888999999999999988753
No 95
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.31 E-value=4.1e-10 Score=112.40 Aligned_cols=104 Identities=20% Similarity=0.226 Sum_probs=78.3
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHc-CCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK-EIV 570 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~ 570 (726)
+..|+|+.+||-|... -+|...+..|+++||.|+++|.||.|.+. .....-..++.-+...+..|++. +
T Consensus 42 ~~gP~illlHGfPe~w--yswr~q~~~la~~~~rviA~DlrGyG~Sd------~P~~~~~Yt~~~l~~di~~lld~Lg-- 111 (322)
T KOG4178|consen 42 GDGPIVLLLHGFPESW--YSWRHQIPGLASRGYRVIAPDLRGYGFSD------APPHISEYTIDELVGDIVALLDHLG-- 111 (322)
T ss_pred CCCCEEEEEccCCccc--hhhhhhhhhhhhcceEEEecCCCCCCCCC------CCCCcceeeHHHHHHHHHHHHHHhc--
Confidence 3469999999998854 45677888999999999999999988652 22222223444444444444432 3
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCC
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVP 606 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 606 (726)
-+|+.+.||++|++++..++..+|++.++.|+...
T Consensus 112 -~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv 146 (322)
T KOG4178|consen 112 -LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNV 146 (322)
T ss_pred -cceeEEEeccchhHHHHHHHHhChhhcceEEEecC
Confidence 38999999999999999999999999999887653
No 96
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.30 E-value=1.6e-10 Score=118.51 Aligned_cols=107 Identities=21% Similarity=0.245 Sum_probs=80.6
Q ss_pred CCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 491 ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 491 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
++..|.||++||..+.. ..|......|.++||.|+.+|+||+|..... .....+++++.+.+..++++-.
T Consensus 15 ~~~~p~vvliHG~~~~~--~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~-------~~~~~~~~~~~~~l~~~i~~l~- 84 (273)
T PLN02211 15 NRQPPHFVLIHGISGGS--WCWYKIRCLMENSGYKVTCIDLKSAGIDQSD-------ADSVTTFDEYNKPLIDFLSSLP- 84 (273)
T ss_pred cCCCCeEEEECCCCCCc--CcHHHHHHHHHhCCCEEEEecccCCCCCCCC-------cccCCCHHHHHHHHHHHHHhcC-
Confidence 34568999999975543 4677888888889999999999999853111 1122567777666665554421
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
..+++.++||||||.++..++.++|++++++|..++.
T Consensus 85 ~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~ 121 (273)
T PLN02211 85 ENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAAT 121 (273)
T ss_pred CCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccc
Confidence 2378999999999999999999899999999988764
No 97
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.29 E-value=3e-10 Score=122.87 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=80.2
Q ss_pred EEEECCCCc--EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccc
Q 004866 468 YDVPSHDGI--SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG 545 (726)
Q Consensus 468 ~~~~s~dG~--~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 545 (726)
-++.+.||. .|.. +..+.. +..|+||++||..+.. ..|...+..|.+ +|.|+.+|+||+|.+.+.-..
T Consensus 82 ~~~~~~~~~~~~~~~-~~~~~~----~~~p~vvllHG~~~~~--~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~-- 151 (402)
T PLN02894 82 RWFRSASNEPRFINT-VTFDSK----EDAPTLVMVHGYGASQ--GFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFT-- 151 (402)
T ss_pred cceecccCcCCeEEE-EEecCC----CCCCEEEEECCCCcch--hHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcc--
Confidence 345556665 5554 333322 3458999999975532 345555666655 699999999999976432110
Q ss_pred cccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 546 RRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 546 ~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
........+.+++.+..+++. .+..++.++||||||++++.++.++|++++++|+.+|.
T Consensus 152 -~~~~~~~~~~~~~~i~~~~~~--l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~ 210 (402)
T PLN02894 152 -CKSTEETEAWFIDSFEEWRKA--KNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPA 210 (402)
T ss_pred -cccHHHHHHHHHHHHHHHHHH--cCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCc
Confidence 000001111233333333322 24468999999999999999999999999999988764
No 98
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.28 E-value=8.3e-11 Score=118.18 Aligned_cols=96 Identities=21% Similarity=0.156 Sum_probs=69.6
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.||++||..+.. ..|......|. .+|.|+.+|+||+|.+... ...+++++.+.+..+. .++
T Consensus 5 ~~iv~~HG~~~~~--~~~~~~~~~l~-~~~~vi~~d~~G~G~s~~~---------~~~~~~~~~~~~~~~~------~~~ 66 (245)
T TIGR01738 5 VHLVLIHGWGMNA--EVFRCLDEELS-AHFTLHLVDLPGHGRSRGF---------GPLSLADAAEAIAAQA------PDP 66 (245)
T ss_pred ceEEEEcCCCCch--hhHHHHHHhhc-cCeEEEEecCCcCccCCCC---------CCcCHHHHHHHHHHhC------CCC
Confidence 7889999864432 34666666664 5799999999999975321 1234555554443222 268
Q ss_pred EEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 575 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
+.++|+|+||++++.++.++|++++++|+.++..
T Consensus 67 ~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 67 AIWLGWSLGGLVALHIAATHPDRVRALVTVASSP 100 (245)
T ss_pred eEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCc
Confidence 9999999999999999999999999999876643
No 99
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.26 E-value=2.7e-10 Score=121.88 Aligned_cols=101 Identities=24% Similarity=0.282 Sum_probs=73.0
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.||++||.++.. ..|...+..|.+ +|.|+.+|+||+|.+... . ....+++++.+.+..++++ ...++
T Consensus 89 p~lvllHG~~~~~--~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~------~-~~~~~~~~~a~~l~~~l~~--l~~~~ 156 (360)
T PLN02679 89 PPVLLVHGFGASI--PHWRRNIGVLAK-NYTVYAIDLLGFGASDKP------P-GFSYTMETWAELILDFLEE--VVQKP 156 (360)
T ss_pred CeEEEECCCCCCH--HHHHHHHHHHhc-CCEEEEECCCCCCCCCCC------C-CccccHHHHHHHHHHHHHH--hcCCC
Confidence 7899999976543 457777776654 899999999999976321 0 0123556666555555543 23368
Q ss_pred EEEEEecccHHHHHHHHH-cCCCceeEEEEeCCc
Q 004866 575 LAGWGYSAGGLLVAAAIN-CCPDLFRAVVLEVPF 607 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~-~~p~~f~a~v~~~p~ 607 (726)
+.++|+|+||++++.++. .+|++++++|+.++.
T Consensus 157 ~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~ 190 (360)
T PLN02679 157 TVLIGNSVGSLACVIAASESTRDLVRGLVLLNCA 190 (360)
T ss_pred eEEEEECHHHHHHHHHHHhcChhhcCEEEEECCc
Confidence 999999999999988776 469999999988764
No 100
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.25 E-value=4.8e-11 Score=116.95 Aligned_cols=165 Identities=19% Similarity=0.152 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccc---ccCC--CCCCChh---h
Q 004866 554 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT---LLYP--ILPLIAA---D 625 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~---~~~~--~~~~~~~---~ 625 (726)
++=|..+++||.+++.+++++|+|+|.|.||.+++.++..+| .++|+|+.+|..-.... .... .+|.... .
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~~~~~~~~~~~~~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSVVFQGIGFYRDSSKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB--SSEEEETTE--EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCceeEecchhcccCCCccCCcCCcChhh
Confidence 355788999999999999999999999999999999999988 68999998885432211 1111 1111100 0
Q ss_pred h--cccCCCCChhHHHHH------HhcCcccccccCCCCCeEEEEecCCCCcChHH-HHHHHHHHHhcCCCCCCCcEEE-
Q 004866 626 Y--EEFGYPGDIDDFHAI------RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWE-AAKWVARVRESTIYDPKRPILL- 695 (726)
Q Consensus 626 ~--~~~g~~~~~~~~~~~------~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~-~~~~~~~L~~~~~~~~~~~~~~- 695 (726)
. ...+.......+... .+.=| +.+ ++.|.|||.|+.|...|-.+ +..+.++|++++.+. ...++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~Ip---vE~-i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~--~~~~l~ 155 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIP---VEK-IKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPH--NVEHLS 155 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB-----GGG---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-------EEEE
T ss_pred ceecCCcceehhhhhhccccccccccccc---HHH-cCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCC--cceEEE
Confidence 0 000110000000000 01112 333 67899999999998887665 446778899887431 22334
Q ss_pred EcCCCCCCCc------hh---------------------hHHHHHHHHHHHHHHhhc
Q 004866 696 NLTTDIVEEN------RY---------------------LQCKESALETAFLIKMME 725 (726)
Q Consensus 696 ~~~~gH~~~~------~~---------------------~~~~~~~~~~~fl~~~l~ 725 (726)
|+++||.... +. .+.+.+..+++||.++|+
T Consensus 156 Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 156 YPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999997431 10 234557788999999997
No 101
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.23 E-value=7.8e-10 Score=114.32 Aligned_cols=197 Identities=18% Similarity=0.238 Sum_probs=130.7
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCC---CCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYK---KENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW 541 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~---~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~ 541 (726)
-++.-++.+||-.+-...+.+.+.. .....|+||.+||-.+++....-......+.++||.|++.|.||.++.--
T Consensus 93 y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~L-- 170 (409)
T KOG1838|consen 93 YTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKL-- 170 (409)
T ss_pred ceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCcc--
Confidence 3455566779988888777665532 13567999999997777654333455566677899999999999765311
Q ss_pred cccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCC---ceeEEEEeCCccccc--c-cc-
Q 004866 542 HHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLEVPFLDAT--N-TL- 614 (726)
Q Consensus 542 ~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~p~~d~~--~-~~- 614 (726)
......-...-+|+.++++++.++ +-+ .++.++|.||||.|....+.+..+ +.+|++..+|+ |.. . .+
T Consensus 171 --tTpr~f~ag~t~Dl~~~v~~i~~~-~P~-a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw-d~~~~~~~~~ 245 (409)
T KOG1838|consen 171 --TTPRLFTAGWTEDLREVVNHIKKR-YPQ-APLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPW-DLLAASRSIE 245 (409)
T ss_pred --CCCceeecCCHHHHHHHHHHHHHh-CCC-CceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccc-hhhhhhhHHh
Confidence 111222234679999999999875 222 489999999999999998876533 55555555554 321 0 00
Q ss_pred -----------cC--------CCCC---------------CChhhhcc------cCCCCChhHHHHHHhcCcccccccCC
Q 004866 615 -----------LY--------PILP---------------LIAADYEE------FGYPGDIDDFHAIRNYSPYDNIQKDV 654 (726)
Q Consensus 615 -----------~~--------~~~~---------------~~~~~~~~------~g~~~~~~~~~~~~~~sp~~~i~~~~ 654 (726)
+. .... -+..++++ +|-+. .-++|++.|+...+++ +
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~---~deYY~~aSs~~~v~~-I 321 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS---VDEYYKKASSSNYVDK-I 321 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc---HHHHHhhcchhhhccc-c
Confidence 00 0000 00111111 23333 3467888999999998 9
Q ss_pred CCCeEEEEecCCCCcChH
Q 004866 655 LYPAVLVTSSFNTRFGVW 672 (726)
Q Consensus 655 ~~P~lli~g~~D~~V~~~ 672 (726)
+.|.|+|++..|+.||..
T Consensus 322 ~VP~L~ina~DDPv~p~~ 339 (409)
T KOG1838|consen 322 KVPLLCINAADDPVVPEE 339 (409)
T ss_pred cccEEEEecCCCCCCCcc
Confidence 999999999999999874
No 102
>PRK06489 hypothetical protein; Provisional
Probab=99.23 E-value=2e-10 Score=123.06 Aligned_cols=139 Identities=16% Similarity=0.128 Sum_probs=84.1
Q ss_pred CCCceEEEEEEEC---CCCcEEEEEEEEcCCCCCC-----CCccEEEEEcCCCCCCCCccch--HHHHH-------HHHC
Q 004866 460 SEFYSCEQYDVPS---HDGISVPLTIIYSPKYKKE-----NQNPGLLHGHGAYGELLDKRWR--SELKS-------LLDR 522 (726)
Q Consensus 460 ~~~~~~~~~~~~s---~dG~~i~~~l~~p~~~~~~-----~~~P~vl~~hGg~~~~~~~~~~--~~~~~-------l~~~ 522 (726)
...+..+.+.+.+ .+|.+|.+... + ... +..|.||++||+.+... .|. ..... +..+
T Consensus 31 ~~~~~~~~~~~~~~~~~~g~~i~y~~~---G-~~~~~~~~~~gpplvllHG~~~~~~--~~~~~~~~~~l~~~~~~l~~~ 104 (360)
T PRK06489 31 EGDWVARDFTFHSGETLPELRLHYTTL---G-TPHRNADGEIDNAVLVLHGTGGSGK--SFLSPTFAGELFGPGQPLDAS 104 (360)
T ss_pred cCceeccceeccCCCCcCCceEEEEec---C-CCCcccccCCCCeEEEeCCCCCchh--hhccchhHHHhcCCCCccccc
Confidence 3455566666666 45555443221 1 100 01478999999866432 222 12222 2357
Q ss_pred CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHH-HHHcCCCCCCcEE-EEEecccHHHHHHHHHcCCCceeE
Q 004866 523 GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARF-LIEKEIVKEHKLA-GWGYSAGGLLVAAAINCCPDLFRA 600 (726)
Q Consensus 523 G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~-l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~~f~a 600 (726)
+|.|+.+|+||+|.+... ...........+++|+.+.+.. +.++- +-+++. |+|+||||++++.++.++|+++++
T Consensus 105 ~~~Via~Dl~GhG~S~~p-~~~~~~~~~~~~~~~~a~~~~~~l~~~l--gi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~ 181 (360)
T PRK06489 105 KYFIILPDGIGHGKSSKP-SDGLRAAFPRYDYDDMVEAQYRLVTEGL--GVKHLRLILGTSMGGMHAWMWGEKYPDFMDA 181 (360)
T ss_pred CCEEEEeCCCCCCCCCCC-CcCCCCCCCcccHHHHHHHHHHHHHHhc--CCCceeEEEEECHHHHHHHHHHHhCchhhhe
Confidence 899999999999975321 0000000112467777755433 43432 225664 899999999999999999999999
Q ss_pred EEEeCCc
Q 004866 601 VVLEVPF 607 (726)
Q Consensus 601 ~v~~~p~ 607 (726)
+|+.++.
T Consensus 182 LVLi~s~ 188 (360)
T PRK06489 182 LMPMASQ 188 (360)
T ss_pred eeeeccC
Confidence 9987664
No 103
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.22 E-value=3.3e-10 Score=120.99 Aligned_cols=130 Identities=19% Similarity=0.258 Sum_probs=84.5
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCc---------cchHHH---HHHHHCCcEEEEEccCC--CCCCCC
Q 004866 474 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK---------RWRSEL---KSLLDRGWVVAFADVRG--GGGGGK 539 (726)
Q Consensus 474 dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~---------~~~~~~---~~l~~~G~~v~~~d~RG--~g~~g~ 539 (726)
+|.+|.+..+-+++ ....|.||++||-.++.... .|...+ ..|..++|.|+++|+|| +|..+.
T Consensus 14 ~~~~~~y~~~g~~~---~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~ 90 (351)
T TIGR01392 14 SDVRVAYETYGTLN---AERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGP 90 (351)
T ss_pred CCceEEEEeccccC---CCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCC
Confidence 45565544332211 12247899999865532111 244443 25667899999999999 454443
Q ss_pred -cccccccc---cCCCCcHHHHHHHHHHHHHcCCCCCCc-EEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 540 -KWHHDGRR---TKKLNSIKDFISCARFLIEKEIVKEHK-LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 540 -~~~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
.+...+.. .....+++|+.+.+..++++- .-++ +.++|+||||.+++.++.++|++++++|+.++..
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 162 (351)
T TIGR01392 91 SSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL--GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSA 162 (351)
T ss_pred CCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc--CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCC
Confidence 22211211 112357888888887777653 3357 9999999999999999999999999999887654
No 104
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.21 E-value=3.2e-10 Score=115.50 Aligned_cols=95 Identities=21% Similarity=0.252 Sum_probs=70.4
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.||++||..+.. ..|......|.+ .|.|+.+|+||+|.+.. . ...+++++... +.+. ..++
T Consensus 14 ~~ivllHG~~~~~--~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~------~---~~~~~~~~~~~---l~~~---~~~~ 75 (256)
T PRK10349 14 VHLVLLHGWGLNA--EVWRCIDEELSS-HFTLHLVDLPGFGRSRG------F---GALSLADMAEA---VLQQ---APDK 75 (256)
T ss_pred CeEEEECCCCCCh--hHHHHHHHHHhc-CCEEEEecCCCCCCCCC------C---CCCCHHHHHHH---HHhc---CCCC
Confidence 5699999965433 457777777754 59999999999997531 1 12355555443 4432 2478
Q ss_pred EEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 575 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
+.++|||+||+++..++.++|++++++|+..+.
T Consensus 76 ~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~ 108 (256)
T PRK10349 76 AIWLGWSLGGLVASQIALTHPERVQALVTVASS 108 (256)
T ss_pred eEEEEECHHHHHHHHHHHhChHhhheEEEecCc
Confidence 999999999999999999999999999987653
No 105
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.21 E-value=1.1e-10 Score=107.03 Aligned_cols=210 Identities=15% Similarity=0.159 Sum_probs=124.2
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch--HHHHHHH-HCCcEEEEEc--cCCCCC----------CCC
Q 004866 475 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR--SELKSLL-DRGWVVAFAD--VRGGGG----------GGK 539 (726)
Q Consensus 475 G~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~--~~~~~l~-~~G~~v~~~d--~RG~g~----------~g~ 539 (726)
+..+...|+.|+....+++.|++.|+-|-... ...|. ...|..+ .+|.+|+.|| .||-.- .|.
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT--~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GA 102 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCT--HENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGA 102 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCccc--chhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCc
Confidence 34566678999988777889999999985332 23332 2334444 5799999999 455321 222
Q ss_pred ccccc-ccccCCC--CcHHHHHHHHHHHHHc--CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc
Q 004866 540 KWHHD-GRRTKKL--NSIKDFISCARFLIEK--EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL 614 (726)
Q Consensus 540 ~~~~~-~~~~~~~--~~~~D~~~~~~~l~~~--~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 614 (726)
.|+-. ....|.. ..++=+..-+-.++.. -.+|+.+++|+||||||+-++.+..+.|.+|+.+.+.+|+++..+
T Consensus 103 GFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~-- 180 (283)
T KOG3101|consen 103 GFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPIN-- 180 (283)
T ss_pred eeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCccc--
Confidence 23221 1112221 1222222222223322 246999999999999999999999999999999999999998763
Q ss_pred cCCCCCCChhhhccc-CCCCChhHHHHHHhcCcccccccC--CCCCeEEEEecCCCCcChHH--HHHHHHHHHhcCCCCC
Q 004866 615 LYPILPLIAADYEEF-GYPGDIDDFHAIRNYSPYDNIQKD--VLYPAVLVTSSFNTRFGVWE--AAKWVARVRESTIYDP 689 (726)
Q Consensus 615 ~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~sp~~~i~~~--~~~P~lli~g~~D~~V~~~~--~~~~~~~L~~~~~~~~ 689 (726)
.|++...+..| |+ + ...+.+|++.+-+++. ... .+||+.|.++..-..| ++.+.++.+....
T Consensus 181 ----cpWGqKAf~gYLG~--~---ka~W~~yDat~lik~y~~~~~-~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~--- 247 (283)
T KOG3101|consen 181 ----CPWGQKAFTGYLGD--N---KAQWEAYDATHLIKNYRGVGD-DILIDQGAADNFLAEQLLPENLLEACKATWQ--- 247 (283)
T ss_pred ----CcchHHHhhcccCC--C---hHHHhhcchHHHHHhcCCCCc-cEEEecCccchhhhhhcChHHHHHHhhcccc---
Confidence 46655444443 43 2 2334555655444321 222 3566555543332232 5566666665432
Q ss_pred CCcEEE--EcCCCCC
Q 004866 690 KRPILL--NLTTDIV 702 (726)
Q Consensus 690 ~~~~~~--~~~~gH~ 702 (726)
.++++ .++-.|.
T Consensus 248 -~~v~~r~~~gyDHS 261 (283)
T KOG3101|consen 248 -APVVFRLQEGYDHS 261 (283)
T ss_pred -ccEEEEeecCCCcc
Confidence 46666 4555674
No 106
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.19 E-value=4.5e-10 Score=121.24 Aligned_cols=102 Identities=20% Similarity=0.277 Sum_probs=78.2
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
..|.||++||..+.. ..|......|. ++|.|+.+|+||+|.+... ....++.++.+.+..++++ .+.
T Consensus 130 ~~~~vl~~HG~~~~~--~~~~~~~~~l~-~~~~v~~~d~~g~G~s~~~--------~~~~~~~~~~~~~~~~~~~--~~~ 196 (371)
T PRK14875 130 DGTPVVLIHGFGGDL--NNWLFNHAALA-AGRPVIALDLPGHGASSKA--------VGAGSLDELAAAVLAFLDA--LGI 196 (371)
T ss_pred CCCeEEEECCCCCcc--chHHHHHHHHh-cCCEEEEEcCCCCCCCCCC--------CCCCCHHHHHHHHHHHHHh--cCC
Confidence 357899999865533 34555556554 4699999999999976322 1234678888888777754 466
Q ss_pred CcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
.++.++|+|+||++++.++.++|++++++|+.+|.
T Consensus 197 ~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~ 231 (371)
T PRK14875 197 ERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPA 231 (371)
T ss_pred ccEEEEeechHHHHHHHHHHhCchheeEEEEECcC
Confidence 78999999999999999999899999999988875
No 107
>PLN02578 hydrolase
Probab=99.18 E-value=1.2e-09 Score=116.82 Aligned_cols=100 Identities=18% Similarity=0.146 Sum_probs=68.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.||++||..+.. ..|......|+ ++|.|+.+|+||+|.+..... ..+..++.+.+..++++- ..++
T Consensus 87 ~~vvliHG~~~~~--~~w~~~~~~l~-~~~~v~~~D~~G~G~S~~~~~--------~~~~~~~a~~l~~~i~~~--~~~~ 153 (354)
T PLN02578 87 LPIVLIHGFGASA--FHWRYNIPELA-KKYKVYALDLLGFGWSDKALI--------EYDAMVWRDQVADFVKEV--VKEP 153 (354)
T ss_pred CeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCccc--------ccCHHHHHHHHHHHHHHh--ccCC
Confidence 5578999865432 34555555654 579999999999997654321 123333333333233221 1368
Q ss_pred EEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 575 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
+.++|||+||++++.++.++|++++++|+.++.
T Consensus 154 ~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~ 186 (354)
T PLN02578 154 AVLVGNSLGGFTALSTAVGYPELVAGVALLNSA 186 (354)
T ss_pred eEEEEECHHHHHHHHHHHhChHhcceEEEECCC
Confidence 999999999999999999999999999987653
No 108
>COG0400 Predicted esterase [General function prediction only]
Probab=99.17 E-value=1.2e-09 Score=104.97 Aligned_cols=186 Identities=13% Similarity=0.072 Sum_probs=119.4
Q ss_pred CCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcc---cccccccC--CCCcHHHHHHHHHHHH
Q 004866 491 ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKW---HHDGRRTK--KLNSIKDFISCARFLI 565 (726)
Q Consensus 491 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~---~~~~~~~~--~~~~~~D~~~~~~~l~ 565 (726)
+...|+||+.||.-+ ....|.+..+.+.- .+.++.++-+=.-..+..| +..+..+. .......+.+.++.+.
T Consensus 15 ~p~~~~iilLHG~Gg--de~~~~~~~~~~~P-~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~ 91 (207)
T COG0400 15 DPAAPLLILLHGLGG--DELDLVPLPELILP-NATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELA 91 (207)
T ss_pred CCCCcEEEEEecCCC--ChhhhhhhhhhcCC-CCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHH
Confidence 345689999998432 33345453333322 3555544433221222222 22222221 1122344455666666
Q ss_pred HcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcC
Q 004866 566 EKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYS 645 (726)
Q Consensus 566 ~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~s 645 (726)
++--+|++||.+.|.|.|+.+++.++.++|++|+++|+.+|+.-... .
T Consensus 92 ~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~--------------------~------------ 139 (207)
T COG0400 92 EEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP--------------------E------------ 139 (207)
T ss_pred HHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC--------------------c------------
Confidence 66778999999999999999999999999999999998888643210 0
Q ss_pred cccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE-EcCCCCCCCchhhHHHHHHHHHHHHHHhh
Q 004866 646 PYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDIVEENRYLQCKESALETAFLIKMM 724 (726)
Q Consensus 646 p~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 724 (726)
+..+ ...+|++++||..|++||..++.++.+.|+..|.+ +.+ .-..||.... ++......|+...+
T Consensus 140 ~~~~---~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~-----v~~~~~~~GH~i~~-----e~~~~~~~wl~~~~ 206 (207)
T COG0400 140 LLPD---LAGTPILLSHGTEDPVVPLALAEALAEYLTASGAD-----VEVRWHEGGHEIPP-----EELEAARSWLANTL 206 (207)
T ss_pred cccc---cCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCC-----EEEEEecCCCcCCH-----HHHHHHHHHHHhcc
Confidence 0001 24678999999999999999999999999998853 444 3349996433 44555667887654
No 109
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.17 E-value=1.3e-10 Score=125.14 Aligned_cols=143 Identities=19% Similarity=0.197 Sum_probs=112.2
Q ss_pred CCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch----HH--HHHHHHCCcEEEEEccCCC
Q 004866 461 EFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR----SE--LKSLLDRGWVVAFADVRGG 534 (726)
Q Consensus 461 ~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~----~~--~~~l~~~G~~v~~~d~RG~ 534 (726)
..+....+.++.+||++|...|++|++. ++.|+++..+=.|-......+. .. ...++.+||+|+..|.||.
T Consensus 15 ~~~~~~~v~V~MRDGvrL~~dIy~Pa~~---g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~ 91 (563)
T COG2936 15 AGYIERDVMVPMRDGVRLAADIYRPAGA---GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGR 91 (563)
T ss_pred cceeeeeeeEEecCCeEEEEEEEccCCC---CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccc
Confidence 3466777999999999999999999864 7889988776222211110111 11 1368999999999999999
Q ss_pred CCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc
Q 004866 535 GGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN 612 (726)
Q Consensus 535 g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 612 (726)
+++...|..-.. .+.+|-.++|+||++|++.+ .+||.+|.||+|+...++|...|.-.||++...+..|+..
T Consensus 92 ~~SeG~~~~~~~-----~E~~Dg~D~I~Wia~QpWsN-G~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~ 163 (563)
T COG2936 92 GGSEGVFDPESS-----REAEDGYDTIEWLAKQPWSN-GNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYR 163 (563)
T ss_pred ccCCcccceecc-----ccccchhHHHHHHHhCCccC-CeeeeecccHHHHHHHHHHhcCCchheeeccccccccccc
Confidence 988766543222 37899999999999999987 8999999999999999999888888899999999888653
No 110
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=99.15 E-value=2.8e-11 Score=122.94 Aligned_cols=135 Identities=18% Similarity=0.179 Sum_probs=91.0
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccc--hHHHHHHHHCC----cEEEEEccCCCCCCCCccccc----
Q 004866 475 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW--RSELKSLLDRG----WVVAFADVRGGGGGGKKWHHD---- 544 (726)
Q Consensus 475 G~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~--~~~~~~l~~~G----~~v~~~d~RG~g~~g~~~~~~---- 544 (726)
|..+.++|+.|++..+.+++|+|++.||. . .....+ ......+++.| .+++.++.-+.......|+..
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~-~-~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~ 82 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQ-S-GWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSS 82 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHT-T-HHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTT
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCC-c-cccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccc
Confidence 66788899999997778899999999995 1 111111 12234455554 555666655544333444422
Q ss_pred --ccccCCCCcHHHHH--HHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccc
Q 004866 545 --GRRTKKLNSIKDFI--SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 545 --~~~~~~~~~~~D~~--~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~ 611 (726)
.....+...+.+++ +.+.++.++--+++++.+|+|+||||+.++.++.++|++|.++++.+|.++..
T Consensus 83 ~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 83 RRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDPS 153 (251)
T ss_dssp CBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESETT
T ss_pred cccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcccccc
Confidence 11112223455554 35666666655666669999999999999999999999999999999987764
No 111
>PRK07581 hypothetical protein; Validated
Probab=99.13 E-value=7.1e-10 Score=118.00 Aligned_cols=110 Identities=15% Similarity=0.092 Sum_probs=67.7
Q ss_pred CccEEEEEcCCCCCCCCccchHHH---HHHHHCCcEEEEEccCCCCCCCCccccccc---ccCCCCcH-HHHHHHHHHHH
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSEL---KSLLDRGWVVAFADVRGGGGGGKKWHHDGR---RTKKLNSI-KDFISCARFLI 565 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~---~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~---~~~~~~~~-~D~~~~~~~l~ 565 (726)
+.|+||+.||..+... .|...+ ..|...+|.|+++|.||+|.+......... .......+ +|+.+....|.
T Consensus 40 ~~~~vll~~~~~~~~~--~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQ--DNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCcc--cchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 3466777676543321 232221 255567999999999999976432110000 00001123 44444344454
Q ss_pred H-cCCCCCCcE-EEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 566 E-KEIVKEHKL-AGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 566 ~-~~~~d~~ri-~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
+ .+. +++ .|+|+||||++++.++.++|++++++|+.++.
T Consensus 118 ~~lgi---~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~ 158 (339)
T PRK07581 118 EKFGI---ERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGT 158 (339)
T ss_pred HHhCC---CceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecC
Confidence 4 333 684 78999999999999999999999999987543
No 112
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.13 E-value=2.8e-09 Score=114.85 Aligned_cols=113 Identities=20% Similarity=0.269 Sum_probs=76.0
Q ss_pred ccEEEEEcCCCCCCCCc-----------cchHHH---HHHHHCCcEEEEEccCCC-CC-CCCccccc--ccc---cCCCC
Q 004866 494 NPGLLHGHGAYGELLDK-----------RWRSEL---KSLLDRGWVVAFADVRGG-GG-GGKKWHHD--GRR---TKKLN 552 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~-----------~~~~~~---~~l~~~G~~v~~~d~RG~-g~-~g~~~~~~--~~~---~~~~~ 552 (726)
.|.||++||..+..... .|...+ ..|...+|.|+.+|++|+ ++ .+...... +.. .....
T Consensus 48 ~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~ 127 (379)
T PRK00175 48 SNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVI 127 (379)
T ss_pred CCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcC
Confidence 58999999976644210 133332 244467999999999984 32 22221110 000 11135
Q ss_pred cHHHHHHHHHHHHHcCCCCCCc-EEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 553 SIKDFISCARFLIEKEIVKEHK-LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
+++|+.+.+..++++- .-++ ..++|+||||.+++.++.++|++++++|+.++..
T Consensus 128 ~~~~~~~~~~~~l~~l--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 128 TIRDWVRAQARLLDAL--GITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSA 182 (379)
T ss_pred CHHHHHHHHHHHHHHh--CCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCc
Confidence 7889888888777653 3356 4899999999999999999999999999887643
No 113
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.12 E-value=3.7e-09 Score=106.64 Aligned_cols=99 Identities=18% Similarity=0.202 Sum_probs=74.8
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.||++||..+.. ..|...+..| ++|.|+.+|+||+|.+... ...+++++.+.+..++++. ..++
T Consensus 3 p~vvllHG~~~~~--~~w~~~~~~l--~~~~vi~~D~~G~G~S~~~---------~~~~~~~~~~~l~~~l~~~--~~~~ 67 (242)
T PRK11126 3 PWLVFLHGLLGSG--QDWQPVGEAL--PDYPRLYIDLPGHGGSAAI---------SVDGFADVSRLLSQTLQSY--NILP 67 (242)
T ss_pred CEEEEECCCCCCh--HHHHHHHHHc--CCCCEEEecCCCCCCCCCc---------cccCHHHHHHHHHHHHHHc--CCCC
Confidence 6799999986644 4677777766 4799999999999976421 1126667666666666542 3479
Q ss_pred EEEEEecccHHHHHHHHHcCCC-ceeEEEEeCCcc
Q 004866 575 LAGWGYSAGGLLVAAAINCCPD-LFRAVVLEVPFL 608 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~p~~ 608 (726)
+.++||||||.+++.++.++|+ +++++++.++..
T Consensus 68 ~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 68 YWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred eEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCC
Confidence 9999999999999999998865 499988876553
No 114
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.12 E-value=3.3e-09 Score=98.09 Aligned_cols=223 Identities=14% Similarity=0.066 Sum_probs=142.9
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHH 543 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~ 543 (726)
..+.+.++.+.+..+-+.+ +- .+..-++|..||.-......-....+.+|.+.|+-++.+|++|.|++...|+.
T Consensus 9 ~~~~ivi~n~~ne~lvg~l-h~-----tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~ 82 (269)
T KOG4667|consen 9 IAQKIVIPNSRNEKLVGLL-HE-----TGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYY 82 (269)
T ss_pred eeeEEEeccCCCchhhcce-ec-----cCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCcccc
Confidence 5566778877777665522 21 24456899999853332211122345678889999999999999998777664
Q ss_pred cccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCCh
Q 004866 544 DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIA 623 (726)
Q Consensus 544 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~ 623 (726)
. .+....+|+..+++++.... .---+|.|||-||..++..+..+++ .+-+|..+|-.|........-.+...
T Consensus 83 G----n~~~eadDL~sV~q~~s~~n---r~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~~I~eRlg~~~l 154 (269)
T KOG4667|consen 83 G----NYNTEADDLHSVIQYFSNSN---RVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKNGINERLGEDYL 154 (269)
T ss_pred C----cccchHHHHHHHHHHhccCc---eEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhcchhhhhcccHH
Confidence 2 22346699999999997532 2233799999999999999998887 56677777877766543111111111
Q ss_pred hhhcc------------cCCCCChhHH-HHHHh-cCcc-cccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCC
Q 004866 624 ADYEE------------FGYPGDIDDF-HAIRN-YSPY-DNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYD 688 (726)
Q Consensus 624 ~~~~~------------~g~~~~~~~~-~~~~~-~sp~-~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~ 688 (726)
.+..+ ++.-++++-. +.+.. .++. ..|+ ..+|+|-+||..|..||.+.+.+|++.+..+.
T Consensus 155 ~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId--~~C~VLTvhGs~D~IVPve~AkefAk~i~nH~--- 229 (269)
T KOG4667|consen 155 ERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKID--KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNHK--- 229 (269)
T ss_pred HHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcC--ccCceEEEeccCCceeechhHHHHHHhccCCc---
Confidence 11111 1222222211 11110 1111 1244 47999999999999999999999999887743
Q ss_pred CCCcEEEEcCCCCCCCchhhH
Q 004866 689 PKRPILLNLTTDIVEENRYLQ 709 (726)
Q Consensus 689 ~~~~~~~~~~~gH~~~~~~~~ 709 (726)
..+ .+++.|++......
T Consensus 230 ---L~i-IEgADHnyt~~q~~ 246 (269)
T KOG4667|consen 230 ---LEI-IEGADHNYTGHQSQ 246 (269)
T ss_pred ---eEE-ecCCCcCccchhhh
Confidence 223 69999987664333
No 115
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.11 E-value=9.4e-09 Score=110.49 Aligned_cols=219 Identities=11% Similarity=-0.028 Sum_probs=125.7
Q ss_pred eEEEEEEECC-CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCC----cEEEEEccCCCCCCC
Q 004866 464 SCEQYDVPSH-DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRG----WVVAFADVRGGGGGG 538 (726)
Q Consensus 464 ~~~~~~~~s~-dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G----~~v~~~d~RG~g~~g 538 (726)
..+.+++.|. -|.+..++|+.|++.. .+++|+|++.||........ .......|.++| .+|+++|........
T Consensus 179 ~~~~~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~-~~~~ld~li~~g~i~P~ivV~id~~~~~~R~ 256 (411)
T PRK10439 179 PAKEIIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMP-VWPALDSLTHRGQLPPAVYLLIDAIDTTHRS 256 (411)
T ss_pred ceEEEEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCC-HHHHHHHHHHcCCCCceEEEEECCCCccccc
Confidence 3455666653 4667888999998865 56899999999975433222 223445677777 456788763222111
Q ss_pred CcccccccccCCCCcHHHHH--HHHHHHHHc-C-CCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc
Q 004866 539 KKWHHDGRRTKKLNSIKDFI--SCARFLIEK-E-IVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL 614 (726)
Q Consensus 539 ~~~~~~~~~~~~~~~~~D~~--~~~~~l~~~-~-~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~ 614 (726)
.+. .....+.+++ +.+-++.++ . ..|+++.+|+|.||||+.++.++.++|++|.++++.+|.+-+...
T Consensus 257 ~el-------~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~~- 328 (411)
T PRK10439 257 QEL-------PCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPHR- 328 (411)
T ss_pred ccC-------CchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCCc-
Confidence 110 0112333332 223344333 1 348899999999999999999999999999999999986422110
Q ss_pred cCCCCCCChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEE
Q 004866 615 LYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPIL 694 (726)
Q Consensus 615 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 694 (726)
.+. ......+.+.+. ... .+...++|..|..+.+-.....++++.|+++|. .+.
T Consensus 329 --------------~~~-~~~~l~~~l~~~----~~~--~~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~-----~~~ 382 (411)
T PRK10439 329 --------------GGQ-QEGVLLEQLKAG----EVS--ARGLRIVLEAGRREPMIMRANQALYAQLHPAGH-----SVF 382 (411)
T ss_pred --------------cCC-chhHHHHHHHhc----ccC--CCCceEEEeCCCCCchHHHHHHHHHHHHHHCCC-----cEE
Confidence 000 000112222221 011 111135555454333346778999999999984 345
Q ss_pred E-EcCCCCCCCchhhHHH-HHHHHHHHHHH
Q 004866 695 L-NLTTDIVEENRYLQCK-ESALETAFLIK 722 (726)
Q Consensus 695 ~-~~~~gH~~~~~~~~~~-~~~~~~~fl~~ 722 (726)
+ ...+||.... ++ ...+.+.||..
T Consensus 383 ~~~~~GGHd~~~----Wr~~L~~~L~~l~~ 408 (411)
T PRK10439 383 WRQVDGGHDALC----WRGGLIQGLIDLWQ 408 (411)
T ss_pred EEECCCCcCHHH----HHHHHHHHHHHHhc
Confidence 5 4456895322 22 23344566543
No 116
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.08 E-value=1.4e-08 Score=108.37 Aligned_cols=122 Identities=21% Similarity=0.139 Sum_probs=86.8
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCC
Q 004866 472 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKL 551 (726)
Q Consensus 472 s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~ 551 (726)
+.+|.++.+ ...+ ++..|.||++||.+... ..|...+..|. .+|.|+++|+||+|.+...... ....
T Consensus 111 ~~~~~~~~y---~~~G---~~~~~~ivllHG~~~~~--~~w~~~~~~L~-~~~~Via~DlpG~G~S~~p~~~----~~~~ 177 (383)
T PLN03084 111 SSDLFRWFC---VESG---SNNNPPVLLIHGFPSQA--YSYRKVLPVLS-KNYHAIAFDWLGFGFSDKPQPG----YGFN 177 (383)
T ss_pred cCCceEEEE---EecC---CCCCCeEEEECCCCCCH--HHHHHHHHHHh-cCCEEEEECCCCCCCCCCCccc----cccc
Confidence 467877653 2222 12347899999976533 45776666665 5899999999999975332110 0113
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 552 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
.+++++...+..++++- ..+++.|+|+|+||.+++.++.++|++++++|+..|..
T Consensus 178 ys~~~~a~~l~~~i~~l--~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~ 232 (383)
T PLN03084 178 YTLDEYVSSLESLIDEL--KSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPL 232 (383)
T ss_pred CCHHHHHHHHHHHHHHh--CCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCC
Confidence 46777777777776553 23689999999999999999999999999999998764
No 117
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.07 E-value=3.4e-09 Score=112.80 Aligned_cols=86 Identities=19% Similarity=0.152 Sum_probs=61.5
Q ss_pred cchHHHH---HHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc-EEEEEecccHHH
Q 004866 511 RWRSELK---SLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK-LAGWGYSAGGLL 586 (726)
Q Consensus 511 ~~~~~~~---~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r-i~i~G~S~GG~l 586 (726)
.|...+. .|...+|.|+.+|+||+|+... ....+.|+.+.+..+++.- +-++ +.++|+||||++
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~----------~~~~~~~~a~dl~~ll~~l--~l~~~~~lvG~SmGG~v 151 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLD----------VPIDTADQADAIALLLDAL--GIARLHAFVGYSYGALV 151 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCC----------CCCCHHHHHHHHHHHHHHc--CCCcceEEEEECHHHHH
Confidence 3555554 4545689999999999875411 1124566666665565542 2235 479999999999
Q ss_pred HHHHHHcCCCceeEEEEeCCcc
Q 004866 587 VAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 587 ~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
++.++.++|++++++|+.++..
T Consensus 152 A~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 152 GLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred HHHHHHHChHhhheEEEECccc
Confidence 9999999999999999988753
No 118
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.04 E-value=6.9e-10 Score=124.41 Aligned_cols=133 Identities=17% Similarity=0.077 Sum_probs=93.3
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHC-C-cEEEEEccC-CCCCCCCccccccccc
Q 004866 472 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDR-G-WVVAFADVR-GGGGGGKKWHHDGRRT 548 (726)
Q Consensus 472 s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G-~~v~~~d~R-G~g~~g~~~~~~~~~~ 548 (726)
+.|-.. ..|+.|......++.|+||++|||.......... ....|+.+ + ++|+.+||| |.-++...... ..
T Consensus 75 sEdcl~--l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~-~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~---~~ 148 (493)
T cd00312 75 SEDCLY--LNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY-PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI---EL 148 (493)
T ss_pred CCcCCe--EEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC-ChHHHHhcCCCEEEEEecccccccccccCCCC---CC
Confidence 456544 4567787543456789999999985432222221 33455554 3 999999999 66566443221 12
Q ss_pred CCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEecccHHHHHHHHHc--CCCceeEEEEeCCcccc
Q 004866 549 KKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPFLDA 610 (726)
Q Consensus 549 ~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~ 610 (726)
.+...+.|.+++++|+.++- -.||+||.|+|+|+||+++++++.. .+.+|+++|+.+|....
T Consensus 149 ~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~~ 215 (493)
T cd00312 149 PGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSALS 215 (493)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCccC
Confidence 23346899999999998751 2699999999999999999998885 24589999999887653
No 119
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=99.01 E-value=1.1e-08 Score=105.13 Aligned_cols=196 Identities=20% Similarity=0.220 Sum_probs=120.6
Q ss_pred HHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHH-cCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 514 SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE-KEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 514 ~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
..+..|+++||+|+++||-|-|. .|.. + .......-|.+.+++.+.. .+.....+++++|+|-||.-+++++.
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~---~y~~-~--~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~ 90 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT---PYLN-G--RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAE 90 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC---cccC-c--HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHH
Confidence 34578899999999999998775 3321 1 1112345565666655554 24444579999999999999988874
Q ss_pred c----CCCc---eeEEEEeCCcccccccccCCCC-CCC-h---------hhhc---------------------------
Q 004866 593 C----CPDL---FRAVVLEVPFLDATNTLLYPIL-PLI-A---------ADYE--------------------------- 627 (726)
Q Consensus 593 ~----~p~~---f~a~v~~~p~~d~~~~~~~~~~-~~~-~---------~~~~--------------------------- 627 (726)
. .||+ +.++++..|..|+...+..-.. +.. . ..|.
T Consensus 91 l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~ 170 (290)
T PF03583_consen 91 LAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLA 170 (290)
T ss_pred HhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHH
Confidence 4 4776 7899999998887654321000 000 0 0000
Q ss_pred ---------cc--C-----CCC-----ChhHHHHHHhcCc-ccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcC
Q 004866 628 ---------EF--G-----YPG-----DIDDFHAIRNYSP-YDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVREST 685 (726)
Q Consensus 628 ---------~~--g-----~~~-----~~~~~~~~~~~sp-~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~ 685 (726)
.+ + .+. ++.....+.+.+. +.. ....+.|+++.||..|..||+..+.++++++.++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G 249 (290)
T PF03583_consen 171 DIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGG-DWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAG 249 (290)
T ss_pred HHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccC-CCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcC
Confidence 00 0 000 0111122222222 100 11136899999999999999999999999999998
Q ss_pred CCCCCCcEEE--EcCCCCCCCchhhHHHHHHHHHHHHHHhh
Q 004866 686 IYDPKRPILL--NLTTDIVEENRYLQCKESALETAFLIKMM 724 (726)
Q Consensus 686 ~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 724 (726)
. ..+.+ ++..+|... ........++||...|
T Consensus 250 ~----a~V~~~~~~~~~H~~~----~~~~~~~a~~Wl~~rf 282 (290)
T PF03583_consen 250 G----ADVEYVRYPGGGHLGA----AFASAPDALAWLDDRF 282 (290)
T ss_pred C----CCEEEEecCCCChhhh----hhcCcHHHHHHHHHHH
Confidence 2 13444 788999532 2334456779998876
No 120
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=99.01 E-value=6.5e-08 Score=103.20 Aligned_cols=204 Identities=13% Similarity=0.124 Sum_probs=135.3
Q ss_pred eceeeCCCCCEEEEEEeCC-----------------------------CC--cEEEEEEEECCCCceecccc-------c
Q 004866 125 ELSEVSPDHKFLAYTMYDK-----------------------------DN--DYFTLSVRNLNSGALCSKPQ-------A 166 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~-----------------------------g~--e~~~l~v~dl~tg~~~~~~~-------~ 166 (726)
.++.|||||++|||..-.. |+ ....|+|+|+++++...+.. .
T Consensus 104 ~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~~yp~~~~~~YPk~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~ 183 (353)
T PF00930_consen 104 SAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDSQYPEVESIRYPKAGDPNPRVSLFVVDLASGKTTELDPPNSLNPQD 183 (353)
T ss_dssp BSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTESS-EEEEEE--BTTS---EEEEEEEESSSTCCCEE---HHHHTSS
T ss_pred cceEECCCCCEEEEEEECCcCCceEEeeccCCccccCCcccccccCCCCCcCCceEEEEEECCCCcEEEeeeccccCCCc
Confidence 3567999999999975311 11 13579999999997643221 1
Q ss_pred cccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceE---EEEEEc-CCCcEEEEEEcCCCceEE
Q 004866 167 VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVY---VNIRHT-KDFHFVCVHTFSTTSSKV 242 (726)
Q Consensus 167 ~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~---~~~~~s-~Dg~~l~~~~~~~~~~~l 242 (726)
.....+.|++|++.|++...++......+++.+..++.... +.++....+. ..+.+. +++..+++.+...+..+|
T Consensus 184 ~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~-~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hl 262 (353)
T PF00930_consen 184 YYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRV-VLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHL 262 (353)
T ss_dssp EEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEE-EEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEE
T ss_pred cCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeE-EEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEE
Confidence 24567899999998999888877777788888988875544 3444444332 133444 788877777777778999
Q ss_pred EEEeCCCCCCCeEEeeccCCce--EEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEE
Q 004866 243 FLINAADPFSGLTLIWECEGLA--HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVE 320 (726)
Q Consensus 243 ~~~d~~~~~~~~~~l~~~~~~~--~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~ 320 (726)
|+++..+ +.++.|+...-.+ ...++++++.+||.++.... ....||+++++ ..+..+.|........-.
T Consensus 263 y~~~~~~--~~~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~~~p----~~r~lY~v~~~---~~~~~~~LT~~~~~~~~~ 333 (353)
T PF00930_consen 263 YLYDLDG--GKPRQLTSGDWEVTSILGWDEDNNRIYFTANGDNP----GERHLYRVSLD---SGGEPKCLTCEDGDHYSA 333 (353)
T ss_dssp EEEETTS--SEEEESS-SSS-EEEEEEEECTSSEEEEEESSGGT----TSBEEEEEETT---ETTEEEESSTTSSTTEEE
T ss_pred EEEcccc--cceeccccCceeecccceEcCCCCEEEEEecCCCC----CceEEEEEEeC---CCCCeEeccCCCCCceEE
Confidence 9999988 4567777666544 34677889999999997543 25889999885 134556565444333234
Q ss_pred EEeeeCCEEEEEEEeCCe
Q 004866 321 DVDFCKTHMALILREGRT 338 (726)
Q Consensus 321 ~~~~~~~~lv~~~~~~g~ 338 (726)
.++..+++++..++.-+.
T Consensus 334 ~~Spdg~y~v~~~s~~~~ 351 (353)
T PF00930_consen 334 SFSPDGKYYVDTYSGPDT 351 (353)
T ss_dssp EE-TTSSEEEEEEESSSS
T ss_pred EECCCCCEEEEEEcCCCC
Confidence 556666788777765443
No 121
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.00 E-value=3.3e-09 Score=104.16 Aligned_cols=178 Identities=19% Similarity=0.255 Sum_probs=119.2
Q ss_pred EEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHH
Q 004866 479 PLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFI 558 (726)
Q Consensus 479 ~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~ 558 (726)
+..|++|.. .+.+|+||+.||-. .....|....+.+++.||+|+.+|...-... ....+.+++.
T Consensus 5 ~l~v~~P~~---~g~yPVv~f~~G~~--~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~-----------~~~~~~~~~~ 68 (259)
T PF12740_consen 5 PLLVYYPSS---AGTYPVVLFLHGFL--LINSWYSQLLEHVASHGYIVVAPDLYSIGGP-----------DDTDEVASAA 68 (259)
T ss_pred CeEEEecCC---CCCcCEEEEeCCcC--CCHHHHHHHHHHHHhCceEEEEecccccCCC-----------CcchhHHHHH
Confidence 456788875 36799999999854 2334477888999999999999995542221 2235788889
Q ss_pred HHHHHHHHc---C-----CCCCCcEEEEEecccHHHHHHHHHcC-----CCceeEEEEeCCcccccccccCCCCCCChhh
Q 004866 559 SCARFLIEK---E-----IVKEHKLAGWGYSAGGLLVAAAINCC-----PDLFRAVVLEVPFLDATNTLLYPILPLIAAD 625 (726)
Q Consensus 559 ~~~~~l~~~---~-----~~d~~ri~i~G~S~GG~l~~~~~~~~-----p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~ 625 (726)
+.++||.+. . ..|-+||+|+|||.||-++..++..+ +.+|+|+|+..|+-.+... ..
T Consensus 69 ~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~--~~-------- 138 (259)
T PF12740_consen 69 EVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG--SQ-------- 138 (259)
T ss_pred HHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc--cC--------
Confidence 999998872 1 14778999999999999999888876 5589999999997643211 00
Q ss_pred hcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCC--------CcChH--HHHHHHHHHHhcCCCCCCCcEEE
Q 004866 626 YEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNT--------RFGVW--EAAKWVARVRESTIYDPKRPILL 695 (726)
Q Consensus 626 ~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~--------~V~~~--~~~~~~~~L~~~~~~~~~~~~~~ 695 (726)
..|. +..+.|.. . +...|+++|-+|... .|.|. +-.+|+++++... -.+.
T Consensus 139 ----~~P~-------v~~~~p~s-~--~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~------~~~v 198 (259)
T PF12740_consen 139 ----TEPP-------VLTYTPQS-F--DFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPS------WHFV 198 (259)
T ss_pred ----CCCc-------cccCcccc-c--CCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCE------EEEE
Confidence 0111 11112221 1 145788888777762 34444 4568888885421 1222
Q ss_pred EcCCCCC
Q 004866 696 NLTTDIV 702 (726)
Q Consensus 696 ~~~~gH~ 702 (726)
-.+.||.
T Consensus 199 ~~~~GH~ 205 (259)
T PF12740_consen 199 AKDYGHM 205 (259)
T ss_pred eCCCCch
Confidence 6789996
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.98 E-value=2.4e-09 Score=98.04 Aligned_cols=222 Identities=17% Similarity=0.091 Sum_probs=140.2
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch-HHHHHHHHCCcEEEEEccCCCCCCCCccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGGKKWH 542 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 542 (726)
+.+.+.+--..-+.|. |+.|. ...|++|++||||+...+..-. .....+.++||+|+.++|--+..
T Consensus 44 r~e~l~Yg~~g~q~VD--Iwg~~-----~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q------ 110 (270)
T KOG4627|consen 44 RVEHLRYGEGGRQLVD--IWGST-----NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQ------ 110 (270)
T ss_pred chhccccCCCCceEEE--EecCC-----CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcc------
Confidence 4445544322223444 55653 3458999999999865443322 34567788999999998764432
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc-CCCceeEEEEeCCcccccccccCCCCCC
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC-CPDLFRAVVLEVPFLDATNTLLYPILPL 621 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~-~p~~f~a~v~~~p~~d~~~~~~~~~~~~ 621 (726)
...-...+.++...++|+.+. +-+.+.|.+.|||+|+++++.++++ +..++.++++.+|++++.... ....
T Consensus 111 ----~htL~qt~~~~~~gv~filk~-~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~-~te~-- 182 (270)
T KOG4627|consen 111 ----VHTLEQTMTQFTHGVNFILKY-TENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELS-NTES-- 182 (270)
T ss_pred ----cccHHHHHHHHHHHHHHHHHh-cccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHh-CCcc--
Confidence 111224788999999999874 4466889999999999999887765 456788999999999875321 1000
Q ss_pred ChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCC
Q 004866 622 IAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDI 701 (726)
Q Consensus 622 ~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH 701 (726)
....|... +.....|+....-..++.|.|++.+..+.---++|...|++.++++. +.++++.+|
T Consensus 183 ----g~dlgLt~-----~~ae~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~a~-------~~~f~n~~h 246 (270)
T KOG4627|consen 183 ----GNDLGLTE-----RNAESVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRKAS-------FTLFKNYDH 246 (270)
T ss_pred ----ccccCccc-----chhhhcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhhcc-------eeecCCcch
Confidence 01122211 11223344322222378898999999996667999999999999864 223688899
Q ss_pred CCCchhhHHHHHHHHHHHHHHh
Q 004866 702 VEENRYLQCKESALETAFLIKM 723 (726)
Q Consensus 702 ~~~~~~~~~~~~~~~~~fl~~~ 723 (726)
.-. ..+.+..-..++.||.+.
T Consensus 247 y~I-~~~~~~~~s~~~~~~~~~ 267 (270)
T KOG4627|consen 247 YDI-IEETAIDDSDVSRFLRNI 267 (270)
T ss_pred hhH-HHHhccccchHHHHHHHH
Confidence 421 122222223456666654
No 123
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.96 E-value=8.5e-07 Score=91.61 Aligned_cols=209 Identities=12% Similarity=0.078 Sum_probs=112.6
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccc--cccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
....|++||++|.|.++..|. .+||++||++++.+++|.. ....+..+||+++.|||.... ..|++++|.|
T Consensus 39 ~~~~ft~dG~kllF~s~~dg~--~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~-----~~l~~vdL~T 111 (386)
T PF14583_consen 39 YQNCFTDDGRKLLFASDFDGN--RNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNG-----RSLRRVDLDT 111 (386)
T ss_dssp TS--B-TTS-EEEEEE-TTSS---EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETT-----TEEEEEETTT
T ss_pred cCCCcCCCCCEEEEEeccCCC--cceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECC-----CeEEEEECCc
Confidence 445799999999999988775 5799999999999999873 234578899999999998532 3799999998
Q ss_pred CCceeEEeeecCCce-EEEEEEcCCCcEEEEEEcCC-------------------CceEEEEEeCCCCCCCeEEeeccCC
Q 004866 203 TDEDALLLEESNENV-YVNIRHTKDFHFVCVHTFST-------------------TSSKVFLINAADPFSGLTLIWECEG 262 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~-~~~~~~s~Dg~~l~~~~~~~-------------------~~~~l~~~d~~~~~~~~~~l~~~~~ 262 (726)
.+ .++||+.++.-- +.......|++.++...... ..+.|+.+|+.+ ++.+.+.....
T Consensus 112 ~e-~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~t--G~~~~v~~~~~ 188 (386)
T PF14583_consen 112 LE-ERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKT--GERKVVFEDTD 188 (386)
T ss_dssp ---EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT----EEEEEEESS
T ss_pred Cc-EEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCC--CceeEEEecCc
Confidence 75 457887765422 12222356777765543221 126799999998 55666665544
Q ss_pred c-eEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceE--EEEeeeCCEEEEEEEeCCe-
Q 004866 263 L-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVV--EDVDFCKTHMALILREGRT- 338 (726)
Q Consensus 263 ~-~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l--~~~~~~~~~lv~~~~~~g~- 338 (726)
- -....+|....++..+.++... ..+.+|+.++.+ . +..+.+....+.... +.+...+..|++.....|.
T Consensus 189 wlgH~~fsP~dp~li~fCHEGpw~--~Vd~RiW~i~~d-g---~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~ 262 (386)
T PF14583_consen 189 WLGHVQFSPTDPTLIMFCHEGPWD--LVDQRIWTINTD-G---SNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQ 262 (386)
T ss_dssp -EEEEEEETTEEEEEEEEE-S-TT--TSS-SEEEEETT-S------EESS---TTEEEEEEEE-TTSS-EEEEEEETTT-
T ss_pred cccCcccCCCCCCEEEEeccCCcc--eeceEEEEEEcC-C---CcceeeecCCCCcccccccccCCCCEEEEEeecCCCC
Confidence 2 1334556555555555543321 123578888876 2 233333333222222 3455567777775554443
Q ss_pred -eEEEEEecCCC
Q 004866 339 -YRLCSVSLPLP 349 (726)
Q Consensus 339 -~~l~~~~l~~~ 349 (726)
..|..+++.++
T Consensus 263 ~~~i~~~d~~t~ 274 (386)
T PF14583_consen 263 DFWIAGYDPDTG 274 (386)
T ss_dssp -EEEEEE-TTT-
T ss_pred ceEEEeeCCCCC
Confidence 36777887764
No 124
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=98.94 E-value=3.8e-08 Score=123.37 Aligned_cols=124 Identities=19% Similarity=0.167 Sum_probs=84.2
Q ss_pred EEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHH
Q 004866 478 VPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDF 557 (726)
Q Consensus 478 i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~ 557 (726)
+..++.+..... ....|.||++||..+.. ..|......|. .+|.|+.+|.||+|.+...-............++++
T Consensus 1356 ~~~~i~~~~~G~-~~~~~~vVllHG~~~s~--~~w~~~~~~L~-~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~ 1431 (1655)
T PLN02980 1356 FSCLIKVHEVGQ-NAEGSVVLFLHGFLGTG--EDWIPIMKAIS-GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELV 1431 (1655)
T ss_pred eEEEEEEEecCC-CCCCCeEEEECCCCCCH--HHHHHHHHHHh-CCCEEEEEcCCCCCCCCCccccccccccccCCHHHH
Confidence 566555433211 12357899999976654 35766666664 469999999999997642110000001122457777
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 558 ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 558 ~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
.+.+..++++ ...+++.++|+||||.+++.++.++|++++++|+.++.
T Consensus 1432 a~~l~~ll~~--l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1432 ADLLYKLIEH--ITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHH--hCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCC
Confidence 7766666654 24479999999999999999999999999999987754
No 125
>PRK05855 short chain dehydrogenase; Validated
Probab=98.94 E-value=2.4e-08 Score=114.73 Aligned_cols=107 Identities=16% Similarity=0.167 Sum_probs=71.8
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCC
Q 004866 471 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKK 550 (726)
Q Consensus 471 ~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~ 550 (726)
...||.+|.+..+ + +...|.||++||..+.. ..|......| .+||.|+.+|+||+|.+.... ...
T Consensus 8 ~~~~g~~l~~~~~---g---~~~~~~ivllHG~~~~~--~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~------~~~ 72 (582)
T PRK05855 8 VSSDGVRLAVYEW---G---DPDRPTVVLVHGYPDNH--EVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPK------RTA 72 (582)
T ss_pred EeeCCEEEEEEEc---C---CCCCCeEEEEcCCCchH--HHHHHHHHHh-hcceEEEEecCCCCCCCCCCC------ccc
Confidence 4468888876543 1 12358999999986543 4466666666 679999999999999764221 111
Q ss_pred CCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 551 LNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 551 ~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
..+++++.+.+..+++.-.. +.++.++||||||.+++.++.+
T Consensus 73 ~~~~~~~a~dl~~~i~~l~~-~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 73 AYTLARLADDFAAVIDAVSP-DRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ccCHHHHHHHHHHHHHHhCC-CCcEEEEecChHHHHHHHHHhC
Confidence 23566666666666654211 2349999999999888777765
No 126
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.93 E-value=1.9e-09 Score=113.05 Aligned_cols=132 Identities=17% Similarity=0.141 Sum_probs=91.4
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch--HHHHHHHHCC-cEEEEEccCCCCCCCC-cccccc-
Q 004866 471 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR--SELKSLLDRG-WVVAFADVRGGGGGGK-KWHHDG- 545 (726)
Q Consensus 471 ~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~--~~~~~l~~~G-~~v~~~d~RG~g~~g~-~~~~~~- 545 (726)
.|.|..-+ .|+.|. .+..+.|+|||+|||.- .++.... ..-+.|+++| ++|+.+|||-+- +|. .+....
T Consensus 75 ~sEDCL~L--NIwaP~--~~a~~~PVmV~IHGG~y-~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~-lGfL~~~~~~~ 148 (491)
T COG2272 75 GSEDCLYL--NIWAPE--VPAEKLPVMVYIHGGGY-IMGSGSEPLYDGSALAARGDVVVVSVNYRLGA-LGFLDLSSLDT 148 (491)
T ss_pred ccccceeE--EeeccC--CCCCCCcEEEEEecccc-ccCCCcccccChHHHHhcCCEEEEEeCccccc-ceeeehhhccc
Confidence 46677544 466777 33456899999999622 1222222 3457899998 999999999643 221 111111
Q ss_pred -cccCCCCcHHHHHHHHHHHHHcC---CCCCCcEEEEEecccHHHHHHHHHcCCC---ceeEEEEeCCccc
Q 004866 546 -RRTKKLNSIKDFISCARFLIEKE---IVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLEVPFLD 609 (726)
Q Consensus 546 -~~~~~~~~~~D~~~~~~~l~~~~---~~d~~ri~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~~p~~d 609 (726)
........+.|++.+++|+.++- --||++|.|+|.|+|++.++.++.. |. +|+.+|+.+|-.-
T Consensus 149 ~~~~~~n~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 149 EDAFASNLGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred cccccccccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 11111257899999999998751 1399999999999999999988874 65 7999999888664
No 127
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.92 E-value=4.8e-08 Score=91.53 Aligned_cols=183 Identities=15% Similarity=0.164 Sum_probs=122.3
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCC--------CcccccccccCCCCcHHHHHHHHHHHHHc
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGG--------KKWHHDGRRTKKLNSIKDFISCARFLIEK 567 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g--------~~~~~~~~~~~~~~~~~D~~~~~~~l~~~ 567 (726)
+||.+.--+|.+. +.-...+..++..||.|++||+-.+.-+. ..|.+ +..-...+.|+.+.++||..+
T Consensus 41 ~li~i~DvfG~~~-~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~---~~~~~~~~~~i~~v~k~lk~~ 116 (242)
T KOG3043|consen 41 VLIVIQDVFGFQF-PNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMK---GHSPPKIWKDITAVVKWLKNH 116 (242)
T ss_pred EEEEEEeeecccc-HHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHh---cCCcccchhHHHHHHHHHHHc
Confidence 5555544444321 11234556778889999999975442111 12222 222345789999999999976
Q ss_pred CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCcc
Q 004866 568 EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPY 647 (726)
Q Consensus 568 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~ 647 (726)
+ ++.+||++|.++||-++..+....| +|.|+++..|.. .+.++
T Consensus 117 g--~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~------------------------~d~~D---------- 159 (242)
T KOG3043|consen 117 G--DSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSF------------------------VDSAD---------- 159 (242)
T ss_pred C--CcceeeEEEEeecceEEEEeeccch-hheeeeEecCCc------------------------CChhH----------
Confidence 5 4589999999999988887777666 788888766521 11111
Q ss_pred cccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc-h------h---hHHHHHHHHH
Q 004866 648 DNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-R------Y---LQCKESALET 717 (726)
Q Consensus 648 ~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~------~---~~~~~~~~~~ 717 (726)
+. +++.|++++-++.|..||+..-.++-++|++...- ...+.+|++.+||+.. | + ...+..++.+
T Consensus 160 --~~-~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~--~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~ 234 (242)
T KOG3043|consen 160 --IA-NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAV--GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFI 234 (242)
T ss_pred --Hh-cCCCCEEEEeecccccCCHHHHHHHHHHHhcCccc--ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHH
Confidence 22 36789999999999999999999999999886532 1123338999999763 2 1 1223355668
Q ss_pred HHHHHhh
Q 004866 718 AFLIKMM 724 (726)
Q Consensus 718 ~fl~~~l 724 (726)
.||.++|
T Consensus 235 ~Wf~~y~ 241 (242)
T KOG3043|consen 235 SWFKHYL 241 (242)
T ss_pred HHHHHhh
Confidence 8988876
No 128
>COG0627 Predicted esterase [General function prediction only]
Probab=98.86 E-value=4.2e-08 Score=100.59 Aligned_cols=221 Identities=16% Similarity=0.115 Sum_probs=128.8
Q ss_pred CCCccEEEEEcCCCCCCCCccc---hHHHHHHHHCCcEEEEEccC--------------CCC-CCCCcccccccccCCCC
Q 004866 491 ENQNPGLLHGHGAYGELLDKRW---RSELKSLLDRGWVVAFADVR--------------GGG-GGGKKWHHDGRRTKKLN 552 (726)
Q Consensus 491 ~~~~P~vl~~hGg~~~~~~~~~---~~~~~~l~~~G~~v~~~d~R--------------G~g-~~g~~~~~~~~~~~~~~ 552 (726)
+++.|++++.||-.... +.+ ..........|++++.+|.. |++ ++=..|.+...... ..
T Consensus 51 ~~~ipV~~~l~G~t~~~--~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~-~~ 127 (316)
T COG0627 51 GRDIPVLYLLSGLTCNE--PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASG-PY 127 (316)
T ss_pred CCCCCEEEEeCCCCCCC--CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccC-cc
Confidence 57789999999854321 222 22333444579999998433 332 12123333221111 34
Q ss_pred cHHHHHHH-HH-HHHHcCCCCC--CcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCC---CCCCChhh
Q 004866 553 SIKDFISC-AR-FLIEKEIVKE--HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYP---ILPLIAAD 625 (726)
Q Consensus 553 ~~~D~~~~-~~-~l~~~~~~d~--~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~---~~~~~~~~ 625 (726)
.+++++.. +- .+.+...++. ++.+|.|+||||+-++.++..+|++|+.+.+.+|+++....+... ..++....
T Consensus 128 q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~~~~~g~~~ 207 (316)
T COG0627 128 QWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAMGDPWGGKA 207 (316)
T ss_pred chhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccccccccCcc
Confidence 56666542 22 2333344454 389999999999999999999999999999999999877544332 11111111
Q ss_pred -hcccCCCCChhHHHHHHhcCccccccc---CC---------CCCeEEE-EecCCCCc--ChHHHHHHHHHHHhcCCCCC
Q 004866 626 -YEEFGYPGDIDDFHAIRNYSPYDNIQK---DV---------LYPAVLV-TSSFNTRF--GVWEAAKWVARVRESTIYDP 689 (726)
Q Consensus 626 -~~~~g~~~~~~~~~~~~~~sp~~~i~~---~~---------~~P~lli-~g~~D~~V--~~~~~~~~~~~L~~~~~~~~ 689 (726)
...||.+.+ ...++++|..++.+ .. ..|.+++ +|..|... ....+..|.++++++|.+
T Consensus 208 ~~~~~G~~~~----~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~-- 281 (316)
T COG0627 208 FNAMLGPDSD----PAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIP-- 281 (316)
T ss_pred HHHhcCCCcc----ccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCC--
Confidence 112454432 23566677766653 21 3344555 44445322 233488999999999854
Q ss_pred CCcEEEEcCCCCCCCchhhHHH-HHHHHHHHHHHhhc
Q 004866 690 KRPILLNLTTDIVEENRYLQCK-ESALETAFLIKMME 725 (726)
Q Consensus 690 ~~~~~~~~~~gH~~~~~~~~~~-~~~~~~~fl~~~l~ 725 (726)
..+...++..|. ...+. ..+..+.|+...|+
T Consensus 282 -~~~~~~~~G~Hs----w~~w~~~l~~~~~~~a~~l~ 313 (316)
T COG0627 282 -NGVRDQPGGDHS----WYFWASQLADHLPWLAGALG 313 (316)
T ss_pred -ceeeeCCCCCcC----HHHHHHHHHHHHHHHHHHhc
Confidence 122214567785 33333 45567889888775
No 129
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.82 E-value=1.7e-07 Score=89.08 Aligned_cols=182 Identities=14% Similarity=0.012 Sum_probs=104.1
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCc--EEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDRGW--VVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 573 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 573 (726)
.|+|+||--.+..........+++.+.|. .+..+|++ ...++.++.+..++++. .++
T Consensus 1 ~ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~-------------------~~p~~a~~~l~~~i~~~--~~~ 59 (187)
T PF05728_consen 1 MILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLP-------------------PFPEEAIAQLEQLIEEL--KPE 59 (187)
T ss_pred CeEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCC-------------------cCHHHHHHHHHHHHHhC--CCC
Confidence 37999985443322222344567777664 45555544 24566677777777653 334
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCC--CChhHHHHHHhcCcccccc
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYP--GDIDDFHAIRNYSPYDNIQ 651 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~sp~~~i~ 651 (726)
.++|+|.|+||+.+.+++.+++ .++ |+..|.+.....+.. .+... ....++.. .+......++++.... +.
T Consensus 60 ~~~liGSSlGG~~A~~La~~~~--~~a-vLiNPav~p~~~l~~-~iG~~--~~~~~~e~~~~~~~~~~~l~~l~~~~-~~ 132 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERYG--LPA-VLINPAVRPYELLQD-YIGEQ--TNPYTGESYELTEEHIEELKALEVPY-PT 132 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHhC--CCE-EEEcCCCCHHHHHHH-hhCcc--ccCCCCccceechHhhhhcceEeccc-cC
Confidence 4999999999999999998764 344 888898876654321 11100 00011111 1112222233222111 11
Q ss_pred cCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHH
Q 004866 652 KDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFL 720 (726)
Q Consensus 652 ~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl 720 (726)
...+.+++++..|..+++.++.+.++ .. ..++.++++|.+..-.+ ....+.+|+
T Consensus 133 --~~~~~lvll~~~DEvLd~~~a~~~~~---~~-------~~~i~~ggdH~f~~f~~---~l~~i~~f~ 186 (187)
T PF05728_consen 133 --NPERYLVLLQTGDEVLDYREAVAKYR---GC-------AQIIEEGGDHSFQDFEE---YLPQIIAFL 186 (187)
T ss_pred --CCccEEEEEecCCcccCHHHHHHHhc---Cc-------eEEEEeCCCCCCccHHH---HHHHHHHhh
Confidence 24578999999999999977655553 22 12236888998765333 333455665
No 130
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.78 E-value=2.3e-07 Score=102.14 Aligned_cols=109 Identities=15% Similarity=0.108 Sum_probs=72.8
Q ss_pred cEEEEEcCCCCCCCC---ccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCC
Q 004866 495 PGLLHGHGAYGELLD---KRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 571 (726)
Q Consensus 495 P~vl~~hGg~~~~~~---~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 571 (726)
+-||++||......- ..-...+.+|+++||.|+++|+||.|.....+. ......+++.++++++.+. ..
T Consensus 189 ~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~------~ddY~~~~i~~al~~v~~~--~g 260 (532)
T TIGR01838 189 TPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT------FDDYIRDGVIAALEVVEAI--TG 260 (532)
T ss_pred CcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC------hhhhHHHHHHHHHHHHHHh--cC
Confidence 446677774322110 111357889999999999999999886533221 1112345677888888753 45
Q ss_pred CCcEEEEEecccHHHHHH----HHHcC-CCceeEEEEeCCccccc
Q 004866 572 EHKLAGWGYSAGGLLVAA----AINCC-PDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 572 ~~ri~i~G~S~GG~l~~~----~~~~~-p~~f~a~v~~~p~~d~~ 611 (726)
.+++.++|+|+||.+++. ++..+ |++++++++.+..+|..
T Consensus 261 ~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 261 EKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred CCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCC
Confidence 689999999999998532 33444 77889888887777653
No 131
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.77 E-value=1.8e-07 Score=97.56 Aligned_cols=214 Identities=18% Similarity=0.198 Sum_probs=123.1
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHC-CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
+..|.||.+||.-. ....|......|... |+.|.++|..|+|-++ +...+ ......+....+..+..+-..
T Consensus 56 ~~~~pvlllHGF~~--~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s--~~~~~----~~y~~~~~v~~i~~~~~~~~~ 127 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGA--SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSS--PLPRG----PLYTLRELVELIRRFVKEVFV 127 (326)
T ss_pred CCCCcEEEeccccC--CcccHhhhccccccccceEEEEEecCCCCcCC--CCCCC----CceehhHHHHHHHHHHHhhcC
Confidence 34678899998433 224566666666654 7999999999966321 11111 125667777777666654333
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCCceeEEE---EeCCcccccccc-------cC-------CCCCCC---h-hhhcc-
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPDLFRAVV---LEVPFLDATNTL-------LY-------PILPLI---A-ADYEE- 628 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v---~~~p~~d~~~~~-------~~-------~~~~~~---~-~~~~~- 628 (726)
.++.++|+|+||+++..+|..+|+..+.+| ...+........ .. ...|.. . ..+.+
T Consensus 128 --~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 205 (326)
T KOG1454|consen 128 --EPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEG 205 (326)
T ss_pred --cceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHh
Confidence 449999999999999999999999999999 444433221110 00 000000 0 00000
Q ss_pred --------cCCC-CChhHHHHHH------------------h-----cCcccccccCCCCCeEEEEecCCCCcChHHHHH
Q 004866 629 --------FGYP-GDIDDFHAIR------------------N-----YSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAK 676 (726)
Q Consensus 629 --------~g~~-~~~~~~~~~~------------------~-----~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~ 676 (726)
+.++ ...+....+. . ..+...+++..+.|+|+++|..|..+|.+.+.+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~ 285 (326)
T KOG1454|consen 206 LLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE 285 (326)
T ss_pred hhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHH
Confidence 0011 0011100010 0 122234555345999999999999999998888
Q ss_pred HHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHh
Q 004866 677 WVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 723 (726)
Q Consensus 677 ~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 723 (726)
+.+.+ .+. +... .+++||.-.- +......+....|+.++
T Consensus 286 ~~~~~--pn~----~~~~-I~~~gH~~h~-e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 286 LKKKL--PNA----ELVE-IPGAGHLPHL-ERPEEVAALLRSFIARL 324 (326)
T ss_pred HHhhC--CCc----eEEE-eCCCCccccc-CCHHHHHHHHHHHHHHh
Confidence 87777 221 2222 6899995322 22233344456888764
No 132
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.72 E-value=2.3e-06 Score=87.84 Aligned_cols=249 Identities=13% Similarity=0.095 Sum_probs=156.9
Q ss_pred eeeCCC--CCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEec--CCCCCceEEEEEcC
Q 004866 127 SEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTD--QNKRPYQIYCSIIG 201 (726)
Q Consensus 127 ~~~SPD--G~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~--~~~~~~~l~~~~l~ 201 (726)
.-..|| |.+|.|++.. +||..++.+|+...++. .+-+..+.++|||++++|++.- +.....+||.++..
T Consensus 42 ~~l~PDI~GD~IiFt~~D------dlWe~slk~g~~~ritS~lGVvnn~kf~pdGrkvaf~rv~~~ss~~taDly~v~~e 115 (668)
T COG4946 42 YYLNPDIYGDRIIFTCCD------DLWEYSLKDGKPLRITSGLGVVNNPKFSPDGRKVAFSRVMLGSSLQTADLYVVPSE 115 (668)
T ss_pred hhcCCcccCcEEEEEech------HHHHhhhccCCeeEEecccceeccccCCCCCcEEEEEEEEecCCCccccEEEEeCC
Confidence 335665 8889998742 38999999999988876 5566789999999999997642 23345689999998
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC---ceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEE
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT---SSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLF 278 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~---~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~ 278 (726)
.++..+++|-. .+|---..|+|||+.|+.+..... ..++|.++.++. +..++.-... .-.+-.|| .+++-
T Consensus 116 ~Ge~kRiTyfG--r~fT~VaG~~~dg~iiV~TD~~tPF~q~~~lYkv~~dg~--~~e~LnlGpa--thiv~~dg-~ivig 188 (668)
T COG4946 116 DGEAKRITYFG--RRFTRVAGWIPDGEIIVSTDFHTPFSQWTELYKVNVDGI--KTEPLNLGPA--THIVIKDG-IIVIG 188 (668)
T ss_pred CCcEEEEEEec--cccceeeccCCCCCEEEEeccCCCcccceeeeEEccCCc--eeeeccCCce--eeEEEeCC-EEEEc
Confidence 88866666542 233222579999998877665443 368999998773 2333322221 11222344 44544
Q ss_pred ecC---cccC--CCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCc
Q 004866 279 TDA---AKEG--QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKG 353 (726)
Q Consensus 279 t~~---~~~~--~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~ 353 (726)
.|. +.+. +.....+|+.-... ...++.++.- +..+...-+.++++|+....+|...|+..|++...
T Consensus 189 RntydLP~WK~YkGGtrGklWis~d~----g~tFeK~vdl--~~~vS~PmIV~~RvYFlsD~eG~GnlYSvdldGkD--- 259 (668)
T COG4946 189 RNTYDLPHWKGYKGGTRGKLWISSDG----GKTFEKFVDL--DGNVSSPMIVGERVYFLSDHEGVGNLYSVDLDGKD--- 259 (668)
T ss_pred cCcccCcccccccCCccceEEEEecC----Ccceeeeeec--CCCcCCceEEcceEEEEecccCccceEEeccCCch---
Confidence 442 1111 11223455543222 2345554432 23355566778999999999999999999997432
Q ss_pred ceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEE
Q 004866 354 VVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQ 414 (726)
Q Consensus 354 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~ 414 (726)
+ +.++ .+.+. . ..+.+.|+.+++|.-.+ .||.||+++.+++.|.
T Consensus 260 ---l---rrHT-nFtdY----Y-~R~~nsDGkrIvFq~~G-----dIylydP~td~lekld 303 (668)
T COG4946 260 ---L---RRHT-NFTDY----Y-PRNANSDGKRIVFQNAG-----DIYLYDPETDSLEKLD 303 (668)
T ss_pred ---h---hhcC-Cchhc----c-ccccCCCCcEEEEecCC-----cEEEeCCCcCcceeee
Confidence 1 1111 11111 1 12446689999886554 9999999988877653
No 133
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.71 E-value=2.6e-08 Score=113.20 Aligned_cols=133 Identities=16% Similarity=0.065 Sum_probs=82.5
Q ss_pred CCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCc--cchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccC
Q 004866 472 SHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK--RWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTK 549 (726)
Q Consensus 472 s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~ 549 (726)
+.|- +...|+.|+......+.|++||+|||.-..-.. ........++.++++|+.+|||-+- +|.-.........
T Consensus 105 sEDC--L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~-~Gfl~~~~~~~~~ 181 (535)
T PF00135_consen 105 SEDC--LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGA-FGFLSLGDLDAPS 181 (535)
T ss_dssp ES-----EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HH-HHH-BSSSTTSHB
T ss_pred CchH--HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccc-cccccccccccCc
Confidence 4565 445578898765555899999999973322111 1223335567789999999999432 1110000000002
Q ss_pred CCCcHHHHHHHHHHHHHcCC---CCCCcEEEEEecccHHHHHHHHHcC--CCceeEEEEeCCc
Q 004866 550 KLNSIKDFISCARFLIEKEI---VKEHKLAGWGYSAGGLLVAAAINCC--PDLFRAVVLEVPF 607 (726)
Q Consensus 550 ~~~~~~D~~~~~~~l~~~~~---~d~~ri~i~G~S~GG~l~~~~~~~~--p~~f~a~v~~~p~ 607 (726)
+...+.|.+.|++|+.++-- =||+||.|+|+|+||..+...+..- ..+|+.+|+.+|.
T Consensus 182 gN~Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 182 GNYGLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp STHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred hhhhhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 44578999999999997621 2999999999999999998887751 3589999999984
No 134
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.69 E-value=1.5e-07 Score=94.29 Aligned_cols=217 Identities=15% Similarity=0.118 Sum_probs=79.3
Q ss_pred ccEEEEEcCCCCCCCC-ccchHHHHHHHHCCcEEEEEccCC-CCCCCCcccccccccCCCCcHHHHHHHHHHHHHcC--C
Q 004866 494 NPGLLHGHGAYGELLD-KRWRSELKSLLDRGWVVAFADVRG-GGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE--I 569 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~-~~~~~~~~~l~~~G~~v~~~d~RG-~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~ 569 (726)
.-+||++-|-..+-.. +........|...||.|+.+..+- .+++|..=. .++.+|+.++++||+... .
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL--------~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL--------DRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H--------HHHHHHHHHHHHHHHHHS---
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh--------hhHHHHHHHHHHHHHHhhccc
Confidence 3478888773222222 333455667766899999999986 335543211 257899999999999872 2
Q ss_pred CCCCcEEEEEecccHHHHHHHHHcCC-----CceeEEEEeCCcccccccccC------------------------CCCC
Q 004866 570 VKEHKLAGWGYSAGGLLVAAAINCCP-----DLFRAVVLEVPFLDATNTLLY------------------------PILP 620 (726)
Q Consensus 570 ~d~~ri~i~G~S~GG~l~~~~~~~~p-----~~f~a~v~~~p~~d~~~~~~~------------------------~~~~ 620 (726)
...++|+|+|||-|.--++..+.... ..+.++|+++||.|-...... ..+|
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp 184 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILP 184 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG-
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceee
Confidence 36789999999999999988887542 568999999999985432110 0000
Q ss_pred CChhhhcccCCCCChhHH---------HHHH----hcCcc-cccccCCCCCeEEEEecCCCCcChH-HHHHHHHHHHhcC
Q 004866 621 LIAADYEEFGYPGDIDDF---------HAIR----NYSPY-DNIQKDVLYPAVLVTSSFNTRFGVW-EAAKWVARVREST 685 (726)
Q Consensus 621 ~~~~~~~~~g~~~~~~~~---------~~~~----~~sp~-~~i~~~~~~P~lli~g~~D~~V~~~-~~~~~~~~L~~~~ 685 (726)
........++.|....-+ +.+. .-.-+ .... .+..|+|++.++.|.-||.+ .-.++.++++.+-
T Consensus 185 ~~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG-~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~ 263 (303)
T PF08538_consen 185 REFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFG-KVSKPLLVLYSGKDEYVPPWVDKEALLERWKAAT 263 (303)
T ss_dssp ---GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGG-G--S-EEEEEE--TT-------------------
T ss_pred ccccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhc-cCCCceEEEecCCCceeccccccccccccccccc
Confidence 000000000122211000 0000 00011 1122 36779999999999888876 4467777777653
Q ss_pred CCCC--CCcEEEEcCCCCCCCchhh---HHHHHHHHHHHH
Q 004866 686 IYDP--KRPILLNLTTDIVEENRYL---QCKESALETAFL 720 (726)
Q Consensus 686 ~~~~--~~~~~~~~~~gH~~~~~~~---~~~~~~~~~~fl 720 (726)
.+.. ...-+ .+++.|....... +.....++..||
T Consensus 264 ~~~~~s~~S~i-I~GA~H~~~~~~~~~~~~~l~~rV~~fl 302 (303)
T PF08538_consen 264 NPKIWSPLSGI-IPGASHNVSGPSQAEAREWLVERVVKFL 302 (303)
T ss_dssp ----------------------------------------
T ss_pred ccccccccccc-cccccccccccccccccccccccccccC
Confidence 2110 01112 6899997654222 223344556665
No 135
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.68 E-value=1.2e-06 Score=93.91 Aligned_cols=113 Identities=15% Similarity=0.128 Sum_probs=74.2
Q ss_pred CCccEEEEEcCCCCCC-C---------Cccc-hHHH---HHHHHCCcEEEEEccCCCCC--------CCCcccccccc--
Q 004866 492 NQNPGLLHGHGAYGEL-L---------DKRW-RSEL---KSLLDRGWVVAFADVRGGGG--------GGKKWHHDGRR-- 547 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~-~---------~~~~-~~~~---~~l~~~G~~v~~~d~RG~g~--------~g~~~~~~~~~-- 547 (726)
.+.++||+.|+-.+.. . .+.| ...+ ..|=-.-|.|+++|.-|++. .|..=...+.+
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 3468999999843321 0 1223 2221 23333469999999998863 11111111111
Q ss_pred ---cCCCCcHHHHHHHHHHHHHcCCCCCCcEE-EEEecccHHHHHHHHHcCCCceeEEEEeCC
Q 004866 548 ---TKKLNSIKDFISCARFLIEKEIVKEHKLA-GWGYSAGGLLVAAAINCCPDLFRAVVLEVP 606 (726)
Q Consensus 548 ---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 606 (726)
.....++.|+.+++..++++-.+ +++. ++|+||||+.++.++.++|++++.+|+.+.
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi--~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~ 194 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGI--ARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIG 194 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCC--CCceEEEEECHHHHHHHHHHHHChHhhheEEEEec
Confidence 12236899999999888875333 5775 999999999999999999999999998754
No 136
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.66 E-value=5.3e-07 Score=84.78 Aligned_cols=238 Identities=16% Similarity=0.035 Sum_probs=129.3
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccc
Q 004866 468 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR 547 (726)
Q Consensus 468 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~ 547 (726)
..++..||..+++.++ |.+ ++.+-.+.+-|+++... -.|....+.++.+||.|+..||||.|++-..=-.....
T Consensus 8 ~~l~~~DG~~l~~~~~-pA~----~~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~ 81 (281)
T COG4757 8 AHLPAPDGYSLPGQRF-PAD----GKASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQW 81 (281)
T ss_pred cccccCCCccCccccc-cCC----CCCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccCCCccccccCcc
Confidence 5688999999998664 443 23343455566666431 23456677888899999999999999764321110001
Q ss_pred cCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccC-----------
Q 004866 548 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY----------- 616 (726)
Q Consensus 548 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~----------- 616 (726)
....-...|+.++++++.+.. -...+..+|||+||.+...+.. +|..-.++|..++. .|...|..
T Consensus 82 ~~~DwA~~D~~aal~~~~~~~--~~~P~y~vgHS~GGqa~gL~~~-~~k~~a~~vfG~ga-gwsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 82 RYLDWARLDFPAALAALKKAL--PGHPLYFVGHSFGGQALGLLGQ-HPKYAAFAVFGSGA-GWSGWMGLRERLGAVLLWN 157 (281)
T ss_pred chhhhhhcchHHHHHHHHhhC--CCCceEEeeccccceeeccccc-CcccceeeEecccc-ccccchhhhhcccceeecc
Confidence 111124578889999998632 2357899999999987665544 56322222222211 12111100
Q ss_pred CCCC-CC----hhhhcccCCCCC-h-hHHHHHHhcC---------ccc-----ccccCCCCCeEEEEecCCCCcChHHHH
Q 004866 617 PILP-LI----AADYEEFGYPGD-I-DDFHAIRNYS---------PYD-----NIQKDVLYPAVLVTSSFNTRFGVWEAA 675 (726)
Q Consensus 617 ~~~~-~~----~~~~~~~g~~~~-~-~~~~~~~~~s---------p~~-----~i~~~~~~P~lli~g~~D~~V~~~~~~ 675 (726)
--.| ++ .....-+|...+ + ..+..++..+ |-. -.++ +++|++++....|+-+|+....
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaa-VrtPi~~~~~~DD~w~P~As~d 236 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAA-VRTPITFSRALDDPWAPPASRD 236 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHH-hcCceeeeccCCCCcCCHHHHH
Confidence 0000 00 000111222211 1 1222222221 111 1223 7899999998889999999999
Q ss_pred HHHHHHHhcCCCCCCCcEEEEcC---CCCCCCchhhHHHHHHHHHHHH
Q 004866 676 KWVARVRESTIYDPKRPILLNLT---TDIVEENRYLQCKESALETAFL 720 (726)
Q Consensus 676 ~~~~~L~~~~~~~~~~~~~~~~~---~gH~~~~~~~~~~~~~~~~~fl 720 (726)
+|...-+++-.+ ...+-+. -||.+--|+.....+.+.+.|+
T Consensus 237 ~f~~~y~nApl~----~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 237 AFASFYRNAPLE----MRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HHHHhhhcCccc----ceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 998888876432 2222222 5896433333233344445554
No 137
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.66 E-value=2.3e-06 Score=82.63 Aligned_cols=144 Identities=12% Similarity=0.142 Sum_probs=93.7
Q ss_pred ceeeCCCCCEEEEEEeCC----CC---cEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 126 LSEVSPDHKFLAYTMYDK----DN---DYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~----g~---e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
.+.|+|+|++|++.++++ +. ....|+.++..+.....+.. .+.+..++|+|+|+.|+..... .+.+|.
T Consensus 10 ~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~---~~~~v~ 86 (194)
T PF08662_consen 10 KLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGS---MPAKVT 86 (194)
T ss_pred EEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEcc---CCcccE
Confidence 346999999999987732 11 24578888877664433322 3347899999999999877432 233677
Q ss_pred EEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeec--cCCceEEeeeecCCE
Q 004866 197 CSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE--CEGLAHCIVEHHEGF 274 (726)
Q Consensus 197 ~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~~~~g~~ 274 (726)
++++.. .....+. ... .-.+.|||+|++|++........+|.++|..+ . +.+.. ........|+|+|++
T Consensus 87 lyd~~~--~~i~~~~--~~~-~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~--~--~~i~~~~~~~~t~~~WsPdGr~ 157 (194)
T PF08662_consen 87 LYDVKG--KKIFSFG--TQP-RNTISWSPDGRFLVLAGFGNLNGDLEFWDVRK--K--KKISTFEHSDATDVEWSPDGRY 157 (194)
T ss_pred EEcCcc--cEeEeec--CCC-ceEEEECCCCCEEEEEEccCCCcEEEEEECCC--C--EEeeccccCcEEEEEEcCCCCE
Confidence 777742 2222222 222 22578999999999887655556788899875 2 23332 223345678999999
Q ss_pred EEEEecC
Q 004866 275 LYLFTDA 281 (726)
Q Consensus 275 l~~~t~~ 281 (726)
|+..+..
T Consensus 158 ~~ta~t~ 164 (194)
T PF08662_consen 158 LATATTS 164 (194)
T ss_pred EEEEEec
Confidence 8877764
No 138
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.64 E-value=1.6e-06 Score=85.00 Aligned_cols=205 Identities=16% Similarity=0.132 Sum_probs=125.9
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHD 544 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~ 544 (726)
...+.+.+.+|..+..--.|-.....+.+..+||-+||.||+. ..|......|.+.|+.++.+|++|.|-....
T Consensus 6 ~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH--~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~---- 79 (297)
T PF06342_consen 6 RKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSH--NDFKYIRPPLDEAGIRFIGINYPGFGFTPGY---- 79 (297)
T ss_pred EEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCc--cchhhhhhHHHHcCeEEEEeCCCCCCCCCCC----
Confidence 3456677888887776666655444444556899999999965 6788889999999999999999998853211
Q ss_pred ccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc-cc------------c
Q 004866 545 GRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL-DA------------T 611 (726)
Q Consensus 545 ~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~-d~------------~ 611 (726)
.. ....-.+-..-++.|.++--++ +++.++|||.|+--++.++..+|- .++++..|+- -. .
T Consensus 80 --~~-~~~~n~er~~~~~~ll~~l~i~-~~~i~~gHSrGcenal~la~~~~~--~g~~lin~~G~r~HkgIrp~~r~~~i 153 (297)
T PF06342_consen 80 --PD-QQYTNEERQNFVNALLDELGIK-GKLIFLGHSRGCENALQLAVTHPL--HGLVLINPPGLRPHKGIRPLSRMETI 153 (297)
T ss_pred --cc-cccChHHHHHHHHHHHHHcCCC-CceEEEEeccchHHHHHHHhcCcc--ceEEEecCCccccccCcCHHHHHHHH
Confidence 11 1123334444455555543344 899999999999999999998863 3566555431 00 0
Q ss_pred ccccCCCCCCCh------hhhcccCCCC--ChhHHHHHHhcCc---------ccccccCCCCCeEEEEecCCCCcChHHH
Q 004866 612 NTLLYPILPLIA------ADYEEFGYPG--DIDDFHAIRNYSP---------YDNIQKDVLYPAVLVTSSFNTRFGVWEA 674 (726)
Q Consensus 612 ~~~~~~~~~~~~------~~~~~~g~~~--~~~~~~~~~~~sp---------~~~i~~~~~~P~lli~g~~D~~V~~~~~ 674 (726)
.++ ..-+|... ..+...|--- -.+....++...- ++.+.+ .+.|.|++.|+.|..|--+.+
T Consensus 154 ~~l-~~~lp~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~-~~ikvli~ygg~DhLIEeeI~ 231 (297)
T PF06342_consen 154 NYL-YDLLPRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNK-KPIKVLIAYGGKDHLIEEEIS 231 (297)
T ss_pred HHH-HHHhhHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhcc-CCCcEEEEEcCcchhhHHHHH
Confidence 000 00011100 0111123211 1222333332211 123334 468999999999988888888
Q ss_pred HHHHHHHHh
Q 004866 675 AKWVARVRE 683 (726)
Q Consensus 675 ~~~~~~L~~ 683 (726)
.++....+.
T Consensus 232 ~E~a~~f~~ 240 (297)
T PF06342_consen 232 FEFAMKFKG 240 (297)
T ss_pred HHHHHHhCC
Confidence 887777654
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.62 E-value=1.4e-06 Score=85.36 Aligned_cols=111 Identities=21% Similarity=0.240 Sum_probs=74.0
Q ss_pred CCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCC--------------CCCccccccc--ccCC----
Q 004866 491 ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGG--------------GGKKWHHDGR--RTKK---- 550 (726)
Q Consensus 491 ~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~--------------~g~~~~~~~~--~~~~---- 550 (726)
+.++|+||+-||--+ .+.-|+.....||++||+|+++..|-... +-.+|..-.. .+-+
T Consensus 115 ~~k~PvvvFSHGLgg--sRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGG--SRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccccc--chhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 578999999999544 33567888899999999999999996542 1122221100 0000
Q ss_pred -----CCcHHHHHHHHHHHHH---------------------cCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEe
Q 004866 551 -----LNSIKDFISCARFLIE---------------------KEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE 604 (726)
Q Consensus 551 -----~~~~~D~~~~~~~l~~---------------------~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~ 604 (726)
....+.+..|++-|.+ ++.+|..+++|+|||.||..++++...+ ..|+|+|+.
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~l 271 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIAL 271 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeee
Confidence 0123444444444433 1336778999999999999998888854 569999954
No 140
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.60 E-value=2.4e-07 Score=94.51 Aligned_cols=130 Identities=16% Similarity=0.127 Sum_probs=94.7
Q ss_pred EEEEEEECCC-CcEEEEEEEEcCCCCC---CCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCc
Q 004866 465 CEQYDVPSHD-GISVPLTIIYSPKYKK---ENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKK 540 (726)
Q Consensus 465 ~~~~~~~s~d-G~~i~~~l~~p~~~~~---~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 540 (726)
...+++.... +.+++.++++|..... ..+.|+|++-||.-.. ...|....+.|++.||+|+.++..|+..-+..
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~--~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~ 115 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSY--VTGFAWLAEHLASYGFVVAAPDHPGSNAGGAP 115 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCC--ccchhhhHHHHhhCceEEEeccCCCcccccCC
Confidence 5556665433 5688999998876421 2479999999984222 45688889999999999999999997754333
Q ss_pred cccccccc----CCCCcHHHHHHHHHHHHHc---C----CCCCCcEEEEEecccHHHHHHHHHcCCC
Q 004866 541 WHHDGRRT----KKLNSIKDFISCARFLIEK---E----IVKEHKLAGWGYSAGGLLVAAAINCCPD 596 (726)
Q Consensus 541 ~~~~~~~~----~~~~~~~D~~~~~~~l~~~---~----~~d~~ri~i~G~S~GG~l~~~~~~~~p~ 596 (726)
-...+... .......|+...+++|.+. + -.|+.||++.|||+||+.++.++..+.+
T Consensus 116 ~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 116 AAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred hhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 33333111 1234567888888888876 3 4689999999999999999999876654
No 141
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.60 E-value=5.2e-08 Score=97.02 Aligned_cols=78 Identities=24% Similarity=0.271 Sum_probs=63.3
Q ss_pred cEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEE
Q 004866 524 WVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVL 603 (726)
Q Consensus 524 ~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~ 603 (726)
|.|+++|.||.|.+...| ..........|+.+.++.+++.--. +++.++|+||||.+++.++.++|++++++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHW----DPDFPDYTTDDLAADLEALREALGI--KKINLVGHSMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCC----GSGSCTHCHHHHHHHHHHHHHHHTT--SSEEEEEETHHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCc----cCCcccccHHHHHHHHHHHHHHhCC--CCeEEEEECCChHHHHHHHHHCchhhcCcEE
Confidence 679999999999764211 1223345789999999999875333 4599999999999999999999999999999
Q ss_pred eCCc
Q 004866 604 EVPF 607 (726)
Q Consensus 604 ~~p~ 607 (726)
.+++
T Consensus 75 ~~~~ 78 (230)
T PF00561_consen 75 ISPP 78 (230)
T ss_dssp ESES
T ss_pred Eeee
Confidence 9985
No 142
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.59 E-value=1.4e-06 Score=105.56 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=64.5
Q ss_pred CccEEEEEcCCCCCCCCccchH-----HHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHH----HHHHH
Q 004866 493 QNPGLLHGHGAYGELLDKRWRS-----ELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFI----SCARF 563 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~-----~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~----~~~~~ 563 (726)
..|.||++||...... .|.. .+..|+++||.|+++|+..++ .. ... ....+.|.+ ++++.
T Consensus 66 ~~~plllvhg~~~~~~--~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~---~~---~~~---~~~~l~~~i~~l~~~l~~ 134 (994)
T PRK07868 66 VGPPVLMVHPMMMSAD--MWDVTRDDGAVGILHRAGLDPWVIDFGSPD---KV---EGG---MERNLADHVVALSEAIDT 134 (994)
T ss_pred CCCcEEEECCCCCCcc--ceecCCcccHHHHHHHCCCEEEEEcCCCCC---hh---HcC---ccCCHHHHHHHHHHHHHH
Confidence 3478899999655432 2332 368899999999999963221 11 000 012444443 33333
Q ss_pred HHHcCCCCCCcEEEEEecccHHHHHHHHHcC-CCceeEEEEeCCcccc
Q 004866 564 LIEKEIVKEHKLAGWGYSAGGLLVAAAINCC-PDLFRAVVLEVPFLDA 610 (726)
Q Consensus 564 l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~~f~a~v~~~p~~d~ 610 (726)
+.+.. .+++.++|+||||.+++.++..+ |++++.+|+.+..+|+
T Consensus 135 v~~~~---~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 135 VKDVT---GRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDT 179 (994)
T ss_pred HHHhh---CCceEEEEEChhHHHHHHHHHhcCCCccceEEEEeccccc
Confidence 33222 25799999999999998777644 5688888876655543
No 143
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.56 E-value=1.1e-07 Score=101.04 Aligned_cols=112 Identities=21% Similarity=0.268 Sum_probs=65.9
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccccc----c-------c-----C-C----
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR----R-------T-----K-K---- 550 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~----~-------~-----~-~---- 550 (726)
+++|+||+-||-.+. +..|+.....||++||+|++++.|-+............ . . . .
T Consensus 98 ~~~PvvIFSHGlgg~--R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGS--RTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT----TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCcc--hhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 679999999997663 45689999999999999999999954322111100000 0 0 0 0
Q ss_pred ----------CCcHHHHHHHHHHHHH--c------------------CCCCCCcEEEEEecccHHHHHHHHHcCCCceeE
Q 004866 551 ----------LNSIKDFISCARFLIE--K------------------EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRA 600 (726)
Q Consensus 551 ----------~~~~~D~~~~~~~l~~--~------------------~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a 600 (726)
..-..|+..+++.|.+ . +-+|.++|+++|||+||..++.++.+. .+|+|
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~ 254 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKA 254 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--E
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcce
Confidence 0123455666666643 1 335788999999999999999988864 78999
Q ss_pred EEEeCC
Q 004866 601 VVLEVP 606 (726)
Q Consensus 601 ~v~~~p 606 (726)
+|+.-|
T Consensus 255 ~I~LD~ 260 (379)
T PF03403_consen 255 GILLDP 260 (379)
T ss_dssp EEEES-
T ss_pred EEEeCC
Confidence 996544
No 144
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.55 E-value=5.9e-07 Score=86.23 Aligned_cols=134 Identities=21% Similarity=0.184 Sum_probs=97.2
Q ss_pred CCCceEEEEEEECC----CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCC
Q 004866 460 SEFYSCEQYDVPSH----DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGG 535 (726)
Q Consensus 460 ~~~~~~~~~~~~s~----dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g 535 (726)
...+.++.+.+.+. ---..+..|+.|.. .+.+|+|++.||..-. ...|+...+.++++||+|++|+.-..-
T Consensus 11 ~G~~~~~~~~Vd~s~~~~~spPkpLlI~tP~~---~G~yPVilF~HG~~l~--ns~Ys~lL~HIASHGfIVVAPQl~~~~ 85 (307)
T PF07224_consen 11 TGKYKTKLFNVDTSSNSSPSPPKPLLIVTPSE---AGTYPVILFLHGFNLY--NSFYSQLLAHIASHGFIVVAPQLYTLF 85 (307)
T ss_pred cCCceeEEEeecCCCCCCCCCCCCeEEecCCc---CCCccEEEEeechhhh--hHHHHHHHHHHhhcCeEEEechhhccc
Confidence 45667777777321 12356777777763 4789999999986543 345667788999999999999976432
Q ss_pred CCCCcccccccccCCCCcHHHHHHHHHHHHHc--------CCCCCCcEEEEEecccHHHHHHHHHcC-CC-ceeEEEEeC
Q 004866 536 GGGKKWHHDGRRTKKLNSIKDFISCARFLIEK--------EIVKEHKLAGWGYSAGGLLVAAAINCC-PD-LFRAVVLEV 605 (726)
Q Consensus 536 ~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--------~~~d~~ri~i~G~S~GG~l~~~~~~~~-p~-~f~a~v~~~ 605 (726)
. ..+..++++....++||-+. -..+-+++++.|||.||-.+.++|..+ .+ .|.|.|..-
T Consensus 86 ~-----------p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiD 154 (307)
T PF07224_consen 86 P-----------PDGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGID 154 (307)
T ss_pred C-----------CCchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheeccc
Confidence 1 23446788899999999753 113778999999999999999988866 33 388888777
Q ss_pred Cccc
Q 004866 606 PFLD 609 (726)
Q Consensus 606 p~~d 609 (726)
|+-.
T Consensus 155 PV~G 158 (307)
T PF07224_consen 155 PVAG 158 (307)
T ss_pred ccCC
Confidence 7654
No 145
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.54 E-value=2.5e-07 Score=94.59 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=77.5
Q ss_pred CCccEEEEEcCCCCCCCCccchH-HHHHHHH-CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRS-ELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 569 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 569 (726)
...|++|++||..+.. ...|.. ....|+. .++.|+++|+++++.. .+..+. . .-...-+++...+++|.++..
T Consensus 34 ~~~p~vilIHG~~~~~-~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~--~y~~a~-~-~~~~v~~~la~~l~~L~~~~g 108 (275)
T cd00707 34 PSRPTRFIIHGWTSSG-EESWISDLRKAYLSRGDYNVIVVDWGRGANP--NYPQAV-N-NTRVVGAELAKFLDFLVDNTG 108 (275)
T ss_pred CCCCcEEEEcCCCCCC-CCcHHHHHHHHHHhcCCCEEEEEECcccccc--ChHHHH-H-hHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999965543 233433 3444554 6899999999986321 111110 0 001123566778888887655
Q ss_pred CCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 570 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 570 ~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
.+.++|.++|||+||.+++.++.+.|++++.+++..|..
T Consensus 109 ~~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~ 147 (275)
T cd00707 109 LSLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAG 147 (275)
T ss_pred CChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCc
Confidence 677899999999999999999999999999999887754
No 146
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=98.52 E-value=9.1e-07 Score=87.65 Aligned_cols=202 Identities=15% Similarity=0.006 Sum_probs=113.8
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHC----CcEEEEEccCCCCCCCCcc
Q 004866 466 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDR----GWVVAFADVRGGGGGGKKW 541 (726)
Q Consensus 466 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~----G~~v~~~d~RG~g~~g~~~ 541 (726)
+.+.+.+.-..+....+++|++..+..++|+++..||-......+- ......|+.. .-+++.+|+----.....+
T Consensus 70 ~~~~~~~~l~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i-~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~ 148 (299)
T COG2382 70 EEILYSSELLSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRI-PRILDSLIAAGEIPPAILVGIDYIDVKKRREEL 148 (299)
T ss_pred hhhhhhhhhccceeEEEEeCCCCCccccccEEEEeccHHHHhcCCh-HHHHHHHHHcCCCCCceEEecCCCCHHHHHHHh
Confidence 4444444333456677889999888889999999998433222221 2233445543 5677777754211111111
Q ss_pred cccccccCCCCcHHH-HHHH-HHHHHHcCC---CCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccC
Q 004866 542 HHDGRRTKKLNSIKD-FISC-ARFLIEKEI---VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLY 616 (726)
Q Consensus 542 ~~~~~~~~~~~~~~D-~~~~-~~~l~~~~~---~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~ 616 (726)
+ ....+.+ +... +=++ +..+ -++++-+++|.|+||+.+++++.++|++|..+++++|.+++.-. +
T Consensus 149 ~-------~n~~~~~~L~~eLlP~v-~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~~~--~ 218 (299)
T COG2382 149 H-------CNEAYWRFLAQELLPYV-EERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWTPL--D 218 (299)
T ss_pred c-------ccHHHHHHHHHHhhhhh-hccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccccCcc--c
Confidence 1 0111111 1111 1222 2222 26788899999999999999999999999999999998875410 0
Q ss_pred CCCCCChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCC-CCcChHHHHHHHHHHHhcCCCCCCCcEEE
Q 004866 617 PILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFN-TRFGVWEAAKWVARVRESTIYDPKRPILL 695 (726)
Q Consensus 617 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D-~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 695 (726)
. ..+.. . +...+-++.+.. ... .++..|+.. ...+ ...++++.|+..+. ++.+
T Consensus 219 -~-------~~~~~------~---~~~l~~~~a~~~-~~~-~~l~~g~~~~~~~~--pNr~L~~~L~~~g~-----~~~y 272 (299)
T COG2382 219 -T-------QPQGE------V---AESLKILHAIGT-DER-IVLTTGGEEGDFLR--PNRALAAQLEKKGI-----PYYY 272 (299)
T ss_pred -c-------ccccc------h---hhhhhhhhccCc-cce-EEeecCCccccccc--hhHHHHHHHHhcCC-----ccee
Confidence 0 01111 1 111122222332 222 444555544 4444 46789999999884 4555
Q ss_pred -EcCCCCCCC
Q 004866 696 -NLTTDIVEE 704 (726)
Q Consensus 696 -~~~~gH~~~ 704 (726)
...+||-..
T Consensus 273 re~~GgHdw~ 282 (299)
T COG2382 273 REYPGGHDWA 282 (299)
T ss_pred eecCCCCchh
Confidence 334499543
No 147
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=98.51 E-value=0.00028 Score=77.31 Aligned_cols=253 Identities=16% Similarity=0.087 Sum_probs=151.3
Q ss_pred CeeECCeEEEEEecCCcceEEEEEEecCCccccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCC
Q 004866 54 PLRWGPWLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDH 133 (726)
Q Consensus 54 p~~~g~~~yy~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG 133 (726)
++++|.++.|+-..+|.+...++.+.... + +.+-|. +... ..+.+.|++||
T Consensus 131 ~Spdg~~la~~~s~~G~e~~~l~v~Dl~t--------------------g--~~l~d~--i~~~-----~~~~~~W~~d~ 181 (414)
T PF02897_consen 131 VSPDGKRLAYSLSDGGSEWYTLRVFDLET--------------------G--KFLPDG--IENP-----KFSSVSWSDDG 181 (414)
T ss_dssp ETTTSSEEEEEEEETTSSEEEEEEEETTT--------------------T--EEEEEE--EEEE-----ESEEEEECTTS
T ss_pred ECCCCCEEEEEecCCCCceEEEEEEECCC--------------------C--cCcCCc--cccc-----ccceEEEeCCC
Confidence 45788999999888888887777766531 1 222221 1111 11237899999
Q ss_pred CEEEEEEeCCCCc------EEEEEEEECCCCcee--cccc---ccc-cceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 134 KFLAYTMYDKDND------YFTLSVRNLNSGALC--SKPQ---AVR-VSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 134 ~~la~~~~~~g~e------~~~l~v~dl~tg~~~--~~~~---~~~-~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+.+.|+....... ..+|+.+.+.++... .+.. ... +..+.+|+|+++|++....... .+.+|++++.
T Consensus 182 ~~~~y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~-~s~v~~~d~~ 260 (414)
T PF02897_consen 182 KGFFYTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTS-ESEVYLLDLD 260 (414)
T ss_dssp SEEEEEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSS-EEEEEEEECC
T ss_pred CEEEEEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEcccc-CCeEEEEecc
Confidence 9999987655545 789999999887543 2211 112 4578899999999988766544 5799999998
Q ss_pred CC---C-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC-ceEEEEEeCCCCCC-CeE-EeeccCCc-eEEeeeecCC
Q 004866 202 ST---D-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFS-GLT-LIWECEGL-AHCIVEHHEG 273 (726)
Q Consensus 202 t~---~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~-~~~l~~~d~~~~~~-~~~-~l~~~~~~-~~~~~~~~g~ 273 (726)
.. . .-.++....+...+ .+... |..+++.++.+. ...|..+++.++.. ... .+.+.... ..-.+...++
T Consensus 261 ~~~~~~~~~~~l~~~~~~~~~-~v~~~--~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~~~ 337 (414)
T PF02897_consen 261 DGGSPDAKPKLLSPREDGVEY-YVDHH--GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLFKD 337 (414)
T ss_dssp CTTTSS-SEEEEEESSSS-EE-EEEEE--TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEETT
T ss_pred ccCCCcCCcEEEeCCCCceEE-EEEcc--CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEECC
Confidence 75 2 33444433333322 12222 666667776544 47899999988642 233 55555443 3345566788
Q ss_pred EEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceE-EeecCCCceEEEEe--eeCCEEEEEEEeCCee-EEEEEecCCC
Q 004866 274 FLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES-VFIDDQGLVVEDVD--FCKTHMALILREGRTY-RLCSVSLPLP 349 (726)
Q Consensus 274 ~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-v~~~~~~~~l~~~~--~~~~~lv~~~~~~g~~-~l~~~~l~~~ 349 (726)
+|++..+.++ ..+|..+++. ..+.. .++......+..+. ...+.+.+.+..--.| .++.+|+.++
T Consensus 338 ~Lvl~~~~~~------~~~l~v~~~~-----~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~ 406 (414)
T PF02897_consen 338 YLVLSYRENG------SSRLRVYDLD-----DGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATG 406 (414)
T ss_dssp EEEEEEEETT------EEEEEEEETT------TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTT
T ss_pred EEEEEEEECC------ccEEEEEECC-----CCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 8888877654 3567777764 12221 12221223334433 3357888887776664 7899998765
Q ss_pred C
Q 004866 350 A 350 (726)
Q Consensus 350 ~ 350 (726)
+
T Consensus 407 ~ 407 (414)
T PF02897_consen 407 E 407 (414)
T ss_dssp C
T ss_pred C
Confidence 3
No 148
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.46 E-value=0.00023 Score=73.74 Aligned_cols=142 Identities=13% Similarity=0.029 Sum_probs=84.9
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 203 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~ 203 (726)
..+.|||||+.++.+.... ..|+++|+.+++.+.... ......+.|+|||+.+|.+... ...|+++++.+.
T Consensus 34 ~~l~~~~dg~~l~~~~~~~----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~----~~~l~~~d~~~~ 105 (300)
T TIGR03866 34 RGITLSKDGKLLYVCASDS----DTIQVIDLATGEVIGTLPSGPDPELFALHPNGKILYIANED----DNLVTVIDIETR 105 (300)
T ss_pred CceEECCCCCEEEEEECCC----CeEEEEECCCCcEEEeccCCCCccEEEECCCCCEEEEEcCC----CCeEEEEECCCC
Confidence 3567999999875553322 258999999998765322 2234568999999988766322 237888998764
Q ss_pred CceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEec
Q 004866 204 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTD 280 (726)
Q Consensus 204 ~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~ 280 (726)
. ....+.... ....+.++|||+++++..... ..++.+|..+.. ....+..........++++|+.|++.+.
T Consensus 106 ~-~~~~~~~~~--~~~~~~~~~dg~~l~~~~~~~--~~~~~~d~~~~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 176 (300)
T TIGR03866 106 K-VLAEIPVGV--EPEGMAVSPDGKIVVNTSETT--NMAHFIDTKTYE-IVDNVLVDQRPRFAEFTADGKELWVSSE 176 (300)
T ss_pred e-EEeEeeCCC--CcceEEECCCCCEEEEEecCC--CeEEEEeCCCCe-EEEEEEcCCCccEEEECCCCCEEEEEcC
Confidence 3 111222111 123578999999988766532 345667776532 1111222222223456788887776544
No 149
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.45 E-value=0.00032 Score=72.87 Aligned_cols=158 Identities=10% Similarity=0.118 Sum_probs=89.9
Q ss_pred eeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-c-cccceeEEe--cCCCEEEEEEecCC-C------------
Q 004866 128 EVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-A-VRVSNIAWA--KDGQALIYVVTDQN-K------------ 190 (726)
Q Consensus 128 ~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~-~~~~~~~Ws--pDg~~l~y~~~~~~-~------------ 190 (726)
.+||+.+.|.|..+ +. .|+.+||+|++...+.. . +-.....|+ .|++.++.....+. .
T Consensus 87 ~~s~~~~~~~Yv~~--~~---~l~~vdL~T~e~~~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~ 161 (386)
T PF14583_consen 87 FLSPDDRALYYVKN--GR---SLRRVDLDTLEERVVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREF 161 (386)
T ss_dssp EE-TTSSEEEEEET--TT---EEEEEETTT--EEEEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHH
T ss_pred EEecCCCeEEEEEC--CC---eEEEEECCcCcEEEEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHH
Confidence 58999999999753 22 58999999998765433 2 233346775 45777766554321 1
Q ss_pred ----CCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC----ceEEEEEeCCCCCCCeEEeeccCC
Q 004866 191 ----RPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT----SSKVFLINAADPFSGLTLIWECEG 262 (726)
Q Consensus 191 ----~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~----~~~l~~~d~~~~~~~~~~l~~~~~ 262 (726)
....|+.+++.+++ ...++++.. +...+.+||..-.++.-+..+. ..+||+++.++ +..+++..+..
T Consensus 162 ~~a~p~~~i~~idl~tG~-~~~v~~~~~--wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg--~~~~~v~~~~~ 236 (386)
T PF14583_consen 162 YEARPHCRIFTIDLKTGE-RKVVFEDTD--WLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDG--SNVKKVHRRME 236 (386)
T ss_dssp HHC---EEEEEEETTT---EEEEEEESS---EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS-----EESS---T
T ss_pred HhhCCCceEEEEECCCCc-eeEEEecCc--cccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCC--CcceeeecCCC
Confidence 23579999999875 455666543 3344667777666655554443 35899999887 45666665554
Q ss_pred ceE---EeeeecCCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 263 LAH---CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 263 ~~~---~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
+.. -+|.+||..+++..-..+. ..+.|+.++++
T Consensus 237 ~e~~gHEfw~~DG~~i~y~~~~~~~----~~~~i~~~d~~ 272 (386)
T PF14583_consen 237 GESVGHEFWVPDGSTIWYDSYTPGG----QDFWIAGYDPD 272 (386)
T ss_dssp TEEEEEEEE-TTSS-EEEEEEETTT------EEEEEE-TT
T ss_pred CcccccccccCCCCEEEEEeecCCC----CceEEEeeCCC
Confidence 322 2567899998887653332 25778888886
No 150
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.45 E-value=1.6e-05 Score=89.43 Aligned_cols=159 Identities=13% Similarity=0.052 Sum_probs=97.9
Q ss_pred EeeceeeCCCCCEEEEEEeC---CCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecC-------CCCC
Q 004866 123 YEELSEVSPDHKFLAYTMYD---KDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQ-------NKRP 192 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~---~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~-------~~~~ 192 (726)
.++.+++||||+++||.... .++....||+.+. +|+..+++.......+.|+|||++|+|..... ....
T Consensus 351 ~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~ 429 (591)
T PRK13616 351 NITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPAT 429 (591)
T ss_pred CcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCCCCCCceECCCCCceEEEecCcceEEEeccCCC
Confidence 46788999999999998742 2234678999997 44445555444578899999999999885321 1123
Q ss_pred ceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEE---EeCCCCCC---CeEEeeccCCc--e
Q 004866 193 YQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFL---INAADPFS---GLTLIWECEGL--A 264 (726)
Q Consensus 193 ~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~---~d~~~~~~---~~~~l~~~~~~--~ 264 (726)
.++|++++..+.... .. +.. ...+.|||||++|++... .+||+ ....++.. .++.+.....+ .
T Consensus 430 gql~~~~vd~ge~~~---~~-~g~-Issl~wSpDG~RiA~i~~----g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~ 500 (591)
T PRK13616 430 GQLARTPVDASAVAS---RV-PGP-ISELQLSRDGVRAAMIIG----GKVYLAVVEQTEDGQYALTNPREVGPGLGDTAV 500 (591)
T ss_pred ceEEEEeccCchhhh---cc-CCC-cCeEEECCCCCEEEEEEC----CEEEEEEEEeCCCCceeecccEEeecccCCccc
Confidence 477777776654221 11 111 346889999999999873 36777 45444321 12224433322 2
Q ss_pred EEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 265 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 265 ~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
...|. .++.|++.++.. +..++++.++
T Consensus 501 ~l~W~-~~~~L~V~~~~~-------~~~v~~v~vD 527 (591)
T PRK13616 501 SLDWR-TGDSLVVGRSDP-------EHPVWYVNLD 527 (591)
T ss_pred cceEe-cCCEEEEEecCC-------CCceEEEecC
Confidence 23343 455577766532 2457888887
No 151
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.45 E-value=8.8e-06 Score=84.46 Aligned_cols=120 Identities=17% Similarity=0.221 Sum_probs=79.5
Q ss_pred EEEEE-cCCCCCCCCccEEEEEcCC-CCCCCCccchH---HHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcH
Q 004866 480 LTIIY-SPKYKKENQNPGLLHGHGA-YGELLDKRWRS---ELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSI 554 (726)
Q Consensus 480 ~~l~~-p~~~~~~~~~P~vl~~hGg-~~~~~~~~~~~---~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 554 (726)
.|++. |.+.++ +.-|+|||+||| |.....+..-. .+..++. ..++++.||.-... ...+...+..+
T Consensus 108 ~Wlvk~P~~~~p-k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~-------~~~~~~yPtQL 178 (374)
T PF10340_consen 108 YWLVKAPNRFKP-KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSS-------DEHGHKYPTQL 178 (374)
T ss_pred EEEEeCCcccCC-CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEecccccc-------ccCCCcCchHH
Confidence 46666 544333 335999999996 33333222111 1223334 56899999875431 01223445678
Q ss_pred HHHHHHHHHHH-HcCCCCCCcEEEEEecccHHHHHHHHHc--C---CCceeEEEEeCCccccc
Q 004866 555 KDFISCARFLI-EKEIVKEHKLAGWGYSAGGLLVAAAINC--C---PDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 555 ~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG~l~~~~~~~--~---p~~f~a~v~~~p~~d~~ 611 (726)
.++++..++|+ ++|. ++|.++|-||||.|++.++.. . ...-+.+|+.+|.+++.
T Consensus 179 ~qlv~~Y~~Lv~~~G~---~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 179 RQLVATYDYLVESEGN---KNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHhccCC---CeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999 5554 689999999999999887642 1 12357899999999887
No 152
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.42 E-value=1.3e-06 Score=84.49 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=80.1
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHC-CcEEEEEccCCCCCCCCccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDR-GWVVAFADVRGGGGGGKKWH 542 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~ 542 (726)
+.+.+.+.+.|+ ++..++..|. ....|+++..|||-.+. -+|......+..+ -..++++|.||||+.--+-.
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~~----~t~gpil~l~HG~G~S~--LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e 121 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLPS----ATEGPILLLLHGGGSSA--LSFAIFASELKSKIRCRCLALDLRGHGETKVENE 121 (343)
T ss_pred cccccccCCCcc-eEEEEEecCC----CCCccEEEEeecCcccc--hhHHHHHHHHHhhcceeEEEeeccccCccccCCh
Confidence 345566666665 5666665554 23469999999974433 5688888777763 67779999999997532211
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
.+ ........|+.+.++++... .+.+|.++||||||.++...+..
T Consensus 122 ~d---lS~eT~~KD~~~~i~~~fge---~~~~iilVGHSmGGaIav~~a~~ 166 (343)
T KOG2564|consen 122 DD---LSLETMSKDFGAVIKELFGE---LPPQIILVGHSMGGAIAVHTAAS 166 (343)
T ss_pred hh---cCHHHHHHHHHHHHHHHhcc---CCCceEEEeccccchhhhhhhhh
Confidence 11 12234567888888877632 45679999999999999877754
No 153
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.39 E-value=4.9e-05 Score=74.59 Aligned_cols=144 Identities=19% Similarity=0.093 Sum_probs=81.5
Q ss_pred eEEEEEEECCCC-cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHH-HHHHCCcE-EEEEccCC-------
Q 004866 464 SCEQYDVPSHDG-ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELK-SLLDRGWV-VAFADVRG------- 533 (726)
Q Consensus 464 ~~~~~~~~s~dG-~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~-~l~~~G~~-v~~~d~RG------- 533 (726)
.++...+.|.++ ..=.+++..|++..++.+||||.+.-|.-- . +....... .+.+.=.. .+...++.
T Consensus 8 ~~~~~~l~s~~~~~~yri~i~~P~~~~~~~~YpVlY~lDGn~v--f-~~~~~~~~~~~~~~~~~~iv~iGye~~~~~~~~ 84 (264)
T COG2819 8 HFRERDLKSANTGRKYRIFIATPKNYPKPGGYPVLYMLDGNAV--F-NALTEIMLRILADLPPPVIVGIGYETILVFDPN 84 (264)
T ss_pred cceeEeeeecCCCcEEEEEecCCCCCCCCCCCcEEEEecchhh--h-chHHHHhhhhhhcCCCceEEEeccccccccccc
Confidence 344455666655 455688899998877777998766655311 1 11222222 22222211 22222221
Q ss_pred --CCCC---CC-ccccc---c-cc-cCCCCcHH-HHHHHHHHHHHcCC-CCCCcEEEEEecccHHHHHHHHHcCCCceeE
Q 004866 534 --GGGG---GK-KWHHD---G-RR-TKKLNSIK-DFISCARFLIEKEI-VKEHKLAGWGYSAGGLLVAAAINCCPDLFRA 600 (726)
Q Consensus 534 --~g~~---g~-~~~~~---~-~~-~~~~~~~~-D~~~~~~~l~~~~~-~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a 600 (726)
...| .. ..... + .. ..+...+. .+..-+.=++++.+ ++++|.+|+|||+||++++-++..+|+.|.+
T Consensus 85 ~r~~DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~ 164 (264)
T COG2819 85 RRAYDYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGR 164 (264)
T ss_pred cccccCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhce
Confidence 1111 10 00000 0 00 11222333 33445565666544 6899999999999999999999999999999
Q ss_pred EEEeCCcccc
Q 004866 601 VVLEVPFLDA 610 (726)
Q Consensus 601 ~v~~~p~~d~ 610 (726)
.++.+|-+-|
T Consensus 165 y~~~SPSlWw 174 (264)
T COG2819 165 YGLISPSLWW 174 (264)
T ss_pred eeeecchhhh
Confidence 9999996533
No 154
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.37 E-value=1.8e-05 Score=80.86 Aligned_cols=123 Identities=17% Similarity=0.115 Sum_probs=79.3
Q ss_pred EEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccccc-------ccCCC
Q 004866 479 PLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR-------RTKKL 551 (726)
Q Consensus 479 ~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~-------~~~~~ 551 (726)
+..++.|+.. .....|++|+..|.-..............|++.|++-+++..+-.|..-..-..... ...+.
T Consensus 78 ~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~ 156 (348)
T PF09752_consen 78 RFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGR 156 (348)
T ss_pred EEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHh
Confidence 3446677754 234579999998853332211122335678888999999987766542111110000 01123
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeC
Q 004866 552 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEV 605 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~ 605 (726)
..+.+....+.||.++|+ .++|+.|.||||+|+..++...|....++-+.+
T Consensus 157 ~~i~E~~~Ll~Wl~~~G~---~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls 207 (348)
T PF09752_consen 157 ATILESRALLHWLEREGY---GPLGLTGISMGGHMAALAASNWPRPVALVPCLS 207 (348)
T ss_pred HHHHHHHHHHHHHHhcCC---CceEEEEechhHhhHHhhhhcCCCceeEEEeec
Confidence 456677788999999977 599999999999999999998888654444433
No 155
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.37 E-value=3e-06 Score=90.75 Aligned_cols=111 Identities=14% Similarity=0.048 Sum_probs=76.0
Q ss_pred CccEEEEEcCCCCCCCCccchH-HHHHHHH--CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRS-ELKSLLD--RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI 569 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~-~~~~l~~--~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~ 569 (726)
..|++|++||.........|.. ....|.. ..+.|+++|++|+|... +..+.. .-...-+++.+.+++|.++..
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~--y~~a~~--~t~~vg~~la~lI~~L~~~~g 115 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQH--YPTSAA--YTKLVGKDVAKFVNWMQEEFN 115 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCC--Cccccc--cHHHHHHHHHHHHHHHHHhhC
Confidence 4589999999655332234554 3445543 36999999999987532 111110 111122456666777765433
Q ss_pred CCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 570 VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 570 ~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
.+.+++.++|||+||.+++.++.+.|+++..+++..|.
T Consensus 116 l~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPA 153 (442)
T TIGR03230 116 YPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPA 153 (442)
T ss_pred CCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCC
Confidence 57799999999999999999999999999999988775
No 156
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.35 E-value=3.9e-06 Score=95.47 Aligned_cols=100 Identities=20% Similarity=0.177 Sum_probs=69.6
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccc----------c---------ccCCCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG----------R---------RTKKLN 552 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~----------~---------~~~~~~ 552 (726)
...|+||++||..+.. ..|......|+++||.|+.+|+||||.+...-...+ . ++.-..
T Consensus 447 ~g~P~VVllHG~~g~~--~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ 524 (792)
T TIGR03502 447 DGWPVVIYQHGITGAK--ENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQ 524 (792)
T ss_pred CCCcEEEEeCCCCCCH--HHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHH
Confidence 3468999999976643 457778888999999999999999997633200000 0 012233
Q ss_pred cHHHHHHHHHHHH------Hc----CCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 553 SIKDFISCARFLI------EK----EIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 553 ~~~D~~~~~~~l~------~~----~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
.+.|+......|. ++ +..+..++.++||||||+++..++..
T Consensus 525 ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 525 SILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 4577776666665 11 12457899999999999999988874
No 157
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.35 E-value=1.9e-05 Score=86.18 Aligned_cols=86 Identities=20% Similarity=0.176 Sum_probs=63.1
Q ss_pred hHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHH----HHHHHHHcCCCCCCcEEEEEecccHHHHH
Q 004866 513 RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFIS----CARFLIEKEIVKEHKLAGWGYSAGGLLVA 588 (726)
Q Consensus 513 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l~~~~~~d~~ri~i~G~S~GG~l~~ 588 (726)
...+++|+++|+.|++++.|.-+...+ ...++|++. |++.+.+ .+...+|-++|+|+||.+++
T Consensus 237 ~SlVr~lv~qG~~VflIsW~nP~~~~r-----------~~~ldDYv~~i~~Ald~V~~--~tG~~~vnl~GyC~GGtl~a 303 (560)
T TIGR01839 237 KSFVQYCLKNQLQVFIISWRNPDKAHR-----------EWGLSTYVDALKEAVDAVRA--ITGSRDLNLLGACAGGLTCA 303 (560)
T ss_pred chHHHHHHHcCCeEEEEeCCCCChhhc-----------CCCHHHHHHHHHHHHHHHHH--hcCCCCeeEEEECcchHHHH
Confidence 456899999999999999998653211 124555554 4444443 35668999999999999988
Q ss_pred H----HHHcCCC-ceeEEEEeCCccccc
Q 004866 589 A----AINCCPD-LFRAVVLEVPFLDAT 611 (726)
Q Consensus 589 ~----~~~~~p~-~f~a~v~~~p~~d~~ 611 (726)
. ++..+++ +++.+++.+..+|..
T Consensus 304 ~~~a~~aA~~~~~~V~sltllatplDf~ 331 (560)
T TIGR01839 304 ALVGHLQALGQLRKVNSLTYLVSLLDST 331 (560)
T ss_pred HHHHHHHhcCCCCceeeEEeeecccccC
Confidence 6 5667785 799999888877754
No 158
>PRK13616 lipoprotein LpqB; Provisional
Probab=98.33 E-value=5.4e-05 Score=85.15 Aligned_cols=116 Identities=14% Similarity=0.109 Sum_probs=76.8
Q ss_pred eeceeeCCCCCEEEEEEeCC-------CCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 124 EELSEVSPDHKFLAYTMYDK-------DNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~-------g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
+..++|||||++|+|..+.. .+...+|+++++++|+... .....+..+.|||||++|+|+.. .+||
T Consensus 399 ~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~-~~~g~Issl~wSpDG~RiA~i~~------g~v~ 471 (591)
T PRK13616 399 LTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS-RVPGPISELQLSRDGVRAAMIIG------GKVY 471 (591)
T ss_pred CCCceECCCCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh-ccCCCcCeEEECCCCCEEEEEEC------CEEE
Confidence 67899999999998886531 1123578999998887655 33556899999999999999861 3777
Q ss_pred E---EEcCCCCceeE-----EeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 197 C---SIIGSTDEDAL-----LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 197 ~---~~l~t~~~~~l-----v~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
+ .+.+.+. ..+ +...... -..++.|..|++ |++... .....+|.+++++.
T Consensus 472 Va~Vvr~~~G~-~~l~~~~~l~~~l~~-~~~~l~W~~~~~-L~V~~~-~~~~~v~~v~vDG~ 529 (591)
T PRK13616 472 LAVVEQTEDGQ-YALTNPREVGPGLGD-TAVSLDWRTGDS-LVVGRS-DPEHPVWYVNLDGS 529 (591)
T ss_pred EEEEEeCCCCc-eeecccEEeecccCC-ccccceEecCCE-EEEEec-CCCCceEEEecCCc
Confidence 7 3433332 222 2111111 124678999998 444433 44567899999874
No 159
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.32 E-value=4.5e-06 Score=84.08 Aligned_cols=103 Identities=22% Similarity=0.253 Sum_probs=71.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHH-HHHHcCCCCCC
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCAR-FLIEKEIVKEH 573 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~-~l~~~~~~d~~ 573 (726)
+.+|++|| +|+.. ..|......|++ ...|.++|..|.|.+.+.-... .....-.-+++.++ |-.+.+. .
T Consensus 91 ~plVliHG-yGAg~-g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP~F~~----d~~~~e~~fvesiE~WR~~~~L---~ 160 (365)
T KOG4409|consen 91 TPLVLIHG-YGAGL-GLFFRNFDDLAK-IRNVYAIDLLGFGRSSRPKFSI----DPTTAEKEFVESIEQWRKKMGL---E 160 (365)
T ss_pred CcEEEEec-cchhH-HHHHHhhhhhhh-cCceEEecccCCCCCCCCCCCC----CcccchHHHHHHHHHHHHHcCC---c
Confidence 34556665 22221 235555666776 8999999999999765432211 12223345666665 4455554 5
Q ss_pred cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCc
Q 004866 574 KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF 607 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~ 607 (726)
++-|+|||+|||++...|.++|++++.+|+..|.
T Consensus 161 KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~ 194 (365)
T KOG4409|consen 161 KMILVGHSFGGYLAAKYALKYPERVEKLILVSPW 194 (365)
T ss_pred ceeEeeccchHHHHHHHHHhChHhhceEEEeccc
Confidence 9999999999999999999999999999998875
No 160
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.31 E-value=1.6e-05 Score=74.73 Aligned_cols=161 Identities=15% Similarity=0.176 Sum_probs=90.2
Q ss_pred EEEEcCCCCCCCCccchHH-HHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcE
Q 004866 497 LLHGHGAYGELLDKRWRSE-LKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKL 575 (726)
Q Consensus 497 vl~~hGg~~~~~~~~~~~~-~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 575 (726)
|+.+||-.++.. ..|.+. .+.|.+. +.|-.++.- .-..++.+..++..+.. +| +.+
T Consensus 1 v~IvhG~~~s~~-~HW~~wl~~~l~~~-~~V~~~~~~------------------~P~~~~W~~~l~~~i~~--~~-~~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPP-DHWQPWLERQLENS-VRVEQPDWD------------------NPDLDEWVQALDQAIDA--ID-EPT 57 (171)
T ss_dssp EEEE--TTSSTT-TSTHHHHHHHHTTS-EEEEEC--T------------------S--HHHHHHHHHHCCHC---T-TTE
T ss_pred CEEeCCCCCCCc-cHHHHHHHHhCCCC-eEEeccccC------------------CCCHHHHHHHHHHHHhh--cC-CCe
Confidence 345554322222 345544 4555555 777766641 12456666666555542 33 459
Q ss_pred EEEEecccHHHHHHHH-HcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCcccccccCC
Q 004866 576 AGWGYSAGGLLVAAAI-NCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDV 654 (726)
Q Consensus 576 ~i~G~S~GG~l~~~~~-~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~ 654 (726)
.++|||.|+.+++..+ .+....++++++.+|+..-... ... .....+. +.... . .
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~---~~~----~~~~~f~---------------~~p~~-~-l 113 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPE---PFP----PELDGFT---------------PLPRD-P-L 113 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHH---CCT----CGGCCCT---------------TSHCC-H-H
T ss_pred EEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCccccc---chh----hhccccc---------------cCccc-c-c
Confidence 9999999999999999 7778899999999998431000 000 0111111 11111 1 2
Q ss_pred CCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc-hhhHHHH
Q 004866 655 LYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN-RYLQCKE 712 (726)
Q Consensus 655 ~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~-~~~~~~~ 712 (726)
..|.++|.+..|+.||+..+.+++++|.. ..+. .+++||+... ....+.+
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l~a-------~~~~-~~~~GHf~~~~G~~~~p~ 164 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRLGA-------ELII-LGGGGHFNAASGFGPWPE 164 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHHT--------EEEE-ETS-TTSSGGGTHSS-HH
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHcCC-------CeEE-CCCCCCcccccCCCchHH
Confidence 34668888888999999999999999964 2333 6999997654 4444443
No 161
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.30 E-value=1.5e-05 Score=76.92 Aligned_cols=103 Identities=11% Similarity=0.048 Sum_probs=68.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
.+..++|||+|+++|.+.... ...+.++|++ ++.+..........+.|||+|+.|+..... +....|..+|+.+
T Consensus 61 ~I~~~~WsP~g~~favi~g~~---~~~v~lyd~~-~~~i~~~~~~~~n~i~wsP~G~~l~~~g~~--n~~G~l~~wd~~~ 134 (194)
T PF08662_consen 61 PIHDVAWSPNGNEFAVIYGSM---PAKVTLYDVK-GKKIFSFGTQPRNTISWSPDGRFLVLAGFG--NLNGDLEFWDVRK 134 (194)
T ss_pred ceEEEEECcCCCEEEEEEccC---CcccEEEcCc-ccEeEeecCCCceEEEECCCCCEEEEEEcc--CCCcEEEEEECCC
Confidence 377889999999998875321 2268899997 433322223344578999999999987543 2234688888874
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEc
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
.+ .+... .......+.|||||++|+..+.
T Consensus 135 ~~---~i~~~-~~~~~t~~~WsPdGr~~~ta~t 163 (194)
T PF08662_consen 135 KK---KISTF-EHSDATDVEWSPDGRYLATATT 163 (194)
T ss_pred CE---Eeecc-ccCcEEEEEEcCCCCEEEEEEe
Confidence 32 22221 1222457899999999987654
No 162
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.28 E-value=7.1e-06 Score=81.37 Aligned_cols=136 Identities=21% Similarity=0.267 Sum_probs=96.5
Q ss_pred eEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch-HHHHHHHHCCcEEEEEccCCCCCCCCccc
Q 004866 464 SCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGGGKKWH 542 (726)
Q Consensus 464 ~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~RG~g~~g~~~~ 542 (726)
.-++.++++.||-+|...++-......+...-+||..-|..|. |. .....=++.||.|+-.|.+|.+|+-.-
T Consensus 213 NG~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGF-----YEvG~m~tP~~lgYsvLGwNhPGFagSTG~-- 285 (517)
T KOG1553|consen 213 NGQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGF-----YEVGVMNTPAQLGYSVLGWNHPGFAGSTGL-- 285 (517)
T ss_pred CCeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccc-----eEeeeecChHHhCceeeccCCCCccccCCC--
Confidence 3567889999999998766654432223334678888774331 10 011223567999999999998875221
Q ss_pred ccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc
Q 004866 543 HDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN 612 (726)
Q Consensus 543 ~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 612 (726)
....++..-..+++++.+..--..++.|.++|||-||+.++++|..+|+. +|+|+.+.|-|++-
T Consensus 286 -----P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdV-kavvLDAtFDDllp 349 (517)
T KOG1553|consen 286 -----PYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDV-KAVVLDATFDDLLP 349 (517)
T ss_pred -----CCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCc-eEEEeecchhhhhh
Confidence 12234556666778888876445678999999999999999999999985 99999998877653
No 163
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.27 E-value=0.00093 Score=69.85 Aligned_cols=244 Identities=13% Similarity=0.079 Sum_probs=121.2
Q ss_pred eeCCCCCEEEEEEe-----CCCCcEEEEEEEECCCCceecccc-cc--------ccceeEEecCCCEEEEEEecCCCCCc
Q 004866 128 EVSPDHKFLAYTMY-----DKDNDYFTLSVRNLNSGALCSKPQ-AV--------RVSNIAWAKDGQALIYVVTDQNKRPY 193 (726)
Q Consensus 128 ~~SPDG~~la~~~~-----~~g~e~~~l~v~dl~tg~~~~~~~-~~--------~~~~~~WspDg~~l~y~~~~~~~~~~ 193 (726)
.+||||+.|..... ..|.+.-.|-|+|++|++.+.... .. ....++.||||++||+...+. ..
T Consensus 52 ~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p---~~ 128 (352)
T TIGR02658 52 VVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSP---SP 128 (352)
T ss_pred eECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCC---CC
Confidence 49999999866543 123333469999999998775322 11 123689999999998763331 24
Q ss_pred eEEEEEcCCCC-ce-------eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE
Q 004866 194 QIYCSIIGSTD-ED-------ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH 265 (726)
Q Consensus 194 ~l~~~~l~t~~-~~-------~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~ 265 (726)
.|-++|+.+.+ .. ..+|...+..| ...+.||+.+.+.....+....--...-.+ .-.++..+.
T Consensus 129 ~V~VvD~~~~kvv~ei~vp~~~~vy~t~e~~~---~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~--~~~~v~~rP---- 199 (352)
T TIGR02658 129 AVGVVDLEGKAFVRMMDVPDCYHIFPTANDTF---FMHCRDGSLAKVGYGTKGNPKIKPTEVFHP--EDEYLINHP---- 199 (352)
T ss_pred EEEEEECCCCcEEEEEeCCCCcEEEEecCCcc---EEEeecCceEEEEecCCCceEEeeeeeecC--CccccccCC----
Confidence 67788887664 11 11222122222 123567777666555443311100000000 000111111
Q ss_pred EeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCC---CCCceEEeecCC--C-----ceEEEEeeeCCEEEEEEEe
Q 004866 266 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP---SRTWESVFIDDQ--G-----LVVEDVDFCKTHMALILRE 335 (726)
Q Consensus 266 ~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~v~~~~~--~-----~~l~~~~~~~~~lv~~~~~ 335 (726)
.+.+.++..+|+++++ .|+.+|+. ... ...|..+..... + ...-.++..++++|+....
T Consensus 200 -~~~~~dg~~~~vs~eG---------~V~~id~~-~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~ 268 (352)
T TIGR02658 200 -AYSNKSGRLVWPTYTG---------KIFQIDLS-SGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQ 268 (352)
T ss_pred -ceEcCCCcEEEEecCC---------eEEEEecC-CCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecC
Confidence 1244344666666652 26666643 111 122332211110 1 1122344446788875432
Q ss_pred -------CCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCC
Q 004866 336 -------GRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYG 408 (726)
Q Consensus 336 -------~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~ 408 (726)
++..+++++|..+.+ .+ ..+++.....++ ..+.|++-.+++.+. ....+..+|.+++
T Consensus 269 ~~~~thk~~~~~V~ViD~~t~k-----vi-----~~i~vG~~~~~i----avS~Dgkp~lyvtn~--~s~~VsViD~~t~ 332 (352)
T TIGR02658 269 RAKWTHKTASRFLFVVDAKTGK-----RL-----RKIELGHEIDSI----NVSQDAKPLLYALST--GDKTLYIFDAETG 332 (352)
T ss_pred CccccccCCCCEEEEEECCCCe-----EE-----EEEeCCCceeeE----EECCCCCeEEEEeCC--CCCcEEEEECcCC
Confidence 233589999987543 11 223333333233 245677734444332 2456889998887
Q ss_pred eE
Q 004866 409 KW 410 (726)
Q Consensus 409 ~~ 410 (726)
+.
T Consensus 333 k~ 334 (352)
T TIGR02658 333 KE 334 (352)
T ss_pred eE
Confidence 54
No 164
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=98.27 E-value=0.0003 Score=72.93 Aligned_cols=194 Identities=10% Similarity=-0.002 Sum_probs=105.5
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
.+.|+|||+.++.+....+ .|+++|+.+++.+.... ......+.|+|||+.|++...+ ...++.++..+..
T Consensus 77 ~~~~~~~g~~l~~~~~~~~----~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~----~~~~~~~d~~~~~ 148 (300)
T TIGR03866 77 LFALHPNGKILYIANEDDN----LVTVIDIETRKVLAEIPVGVEPEGMAVSPDGKIVVNTSET----TNMAHFIDTKTYE 148 (300)
T ss_pred EEEECCCCCEEEEEcCCCC----eEEEEECCCCeEEeEeeCCCCcceEEECCCCCEEEEEecC----CCeEEEEeCCCCe
Confidence 4579999998865532222 59999999876543322 2234678999999988876432 1245566776543
Q ss_pred ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-----C---ceEEeeeecCCEEE
Q 004866 205 EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-----G---LAHCIVEHHEGFLY 276 (726)
Q Consensus 205 ~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-----~---~~~~~~~~~g~~l~ 276 (726)
....+.. .... ..+.+++||++|++.... ...++++|+.++. ..+.+.... . .....++++|+.+|
T Consensus 149 ~~~~~~~-~~~~--~~~~~s~dg~~l~~~~~~--~~~v~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~ 222 (300)
T TIGR03866 149 IVDNVLV-DQRP--RFAEFTADGKELWVSSEI--GGTVSVIDVATRK-VIKKITFEIPGVHPEAVQPVGIKLTKDGKTAF 222 (300)
T ss_pred EEEEEEc-CCCc--cEEEECCCCCEEEEEcCC--CCEEEEEEcCcce-eeeeeeecccccccccCCccceEECCCCCEEE
Confidence 1111111 1111 246789999998876432 2468888988742 122222111 0 11234567888766
Q ss_pred EEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEE--EeeeCCEEEEEEEeCCeeEEEEEecCCC
Q 004866 277 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVED--VDFCKTHMALILREGRTYRLCSVSLPLP 349 (726)
Q Consensus 277 ~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~--~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 349 (726)
+..... ..+..++.. + .+....+... ..+.. +...+++|++....+| .|.++|+.++
T Consensus 223 ~~~~~~--------~~i~v~d~~-~---~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~--~i~v~d~~~~ 281 (300)
T TIGR03866 223 VALGPA--------NRVAVVDAK-T---YEVLDYLLVG--QRVWQLAFTPDEKYLLTTNGVSN--DVSVIDVAAL 281 (300)
T ss_pred EEcCCC--------CeEEEEECC-C---CcEEEEEEeC--CCcceEEECCCCCEEEEEcCCCC--eEEEEECCCC
Confidence 644322 235566654 2 1212222221 12333 4444566665543344 5788887653
No 165
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.26 E-value=3.2e-05 Score=72.59 Aligned_cols=185 Identities=14% Similarity=0.114 Sum_probs=112.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccC------CCCCCCCccccccccc-CCCCc---HHHHHHHHHHH
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVR------GGGGGGKKWHHDGRRT-KKLNS---IKDFISCARFL 564 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~R------G~g~~g~~~~~~~~~~-~~~~~---~~D~~~~~~~l 564 (726)
-+||++||--... ..|......|--+..-.++|..+ -.|..+..|.....-. ....+ +.-..+.+..|
T Consensus 4 atIi~LHglGDsg--~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~L 81 (206)
T KOG2112|consen 4 ATIIFLHGLGDSG--SGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANL 81 (206)
T ss_pred EEEEEEecCCCCC--ccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHH
Confidence 4799999843322 34444433344456666776432 2344455666543222 11112 22223344455
Q ss_pred HHc---CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHH
Q 004866 565 IEK---EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAI 641 (726)
Q Consensus 565 ~~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 641 (726)
+++ .-++++||+|.|.|+||.+++.++..+|......+..+++..-.. ..+. +.+.
T Consensus 82 i~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~-----------~~~~--~~~~-------- 140 (206)
T KOG2112|consen 82 IDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRAS-----------IGLP--GWLP-------- 140 (206)
T ss_pred HHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccch-----------hhcc--CCcc--------
Confidence 543 346889999999999999999999988654444444444332110 0000 1110
Q ss_pred HhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCCchhhHHHHHHHHHHH
Q 004866 642 RNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEENRYLQCKESALETAF 719 (726)
Q Consensus 642 ~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~~~~~~~~~~~~~~~f 719 (726)
.. ...|.++.||..|+.||..-..+..+.|+..++ + +.+ |++-+|. ..-+++.+...|
T Consensus 141 --------~~--~~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~----~-~~f~~y~g~~h~-----~~~~e~~~~~~~ 200 (206)
T KOG2112|consen 141 --------GV--NYTPILLCHGTADPLVPFRFGEKSAQFLKSLGV----R-VTFKPYPGLGHS-----TSPQELDDLKSW 200 (206)
T ss_pred --------cc--CcchhheecccCCceeehHHHHHHHHHHHHcCC----c-eeeeecCCcccc-----ccHHHHHHHHHH
Confidence 00 146888999999999999999999999999883 3 555 8999994 344566667788
Q ss_pred HHH
Q 004866 720 LIK 722 (726)
Q Consensus 720 l~~ 722 (726)
+.+
T Consensus 201 ~~~ 203 (206)
T KOG2112|consen 201 IKT 203 (206)
T ss_pred HHH
Confidence 776
No 166
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=98.25 E-value=0.0001 Score=74.87 Aligned_cols=145 Identities=12% Similarity=0.056 Sum_probs=84.9
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
+=.+++||+|++||-++.. . ..-||....++.-.+..+. ...+..+.||||.++|+-...++ .+++.|+
T Consensus 227 VWfl~FS~nGkyLAsaSkD-~--Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e-----~~~lwDv 298 (519)
T KOG0293|consen 227 VWFLQFSHNGKYLASASKD-S--TAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDE-----VLSLWDV 298 (519)
T ss_pred EEEEEEcCCCeeEeeccCC-c--eEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchH-----heeeccC
Confidence 3445799999999987532 2 2234544444331111111 33567789999999997764432 3888888
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCC-CCeEEeeccCCceEEeeeecCCEEEEEe
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPF-SGLTLIWECEGLAHCIVEHHEGFLYLFT 279 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~~~~~~~~g~~l~~~t 279 (726)
.++.. +..|...-+--..+.+|-|||..++..+.+ ..++.+|+++.. ..++-+.. .......+++||+.++.++
T Consensus 299 ~tgd~-~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d---r~i~~wdlDgn~~~~W~gvr~-~~v~dlait~Dgk~vl~v~ 373 (519)
T KOG0293|consen 299 DTGDL-RHLYPSGLGFSVSSCAWCPDGFRFVTGSPD---RTIIMWDLDGNILGNWEGVRD-PKVHDLAITYDGKYVLLVT 373 (519)
T ss_pred Ccchh-hhhcccCcCCCcceeEEccCCceeEecCCC---CcEEEecCCcchhhccccccc-ceeEEEEEcCCCcEEEEEe
Confidence 88752 334443311122468899999997755443 568888887621 11111100 0112234568999988887
Q ss_pred cC
Q 004866 280 DA 281 (726)
Q Consensus 280 ~~ 281 (726)
..
T Consensus 374 ~d 375 (519)
T KOG0293|consen 374 VD 375 (519)
T ss_pred cc
Confidence 53
No 167
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.24 E-value=2.3e-06 Score=78.58 Aligned_cols=211 Identities=12% Similarity=0.079 Sum_probs=114.7
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHC-CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
.|+.+-|.-|+. ...|.+....|-.. -+.++..|.||.|.+-..-+ ...-..-..|..+|++-+.+. +-.+
T Consensus 44 ~iLlipGalGs~-~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~R----kf~~~ff~~Da~~avdLM~aL---k~~~ 115 (277)
T KOG2984|consen 44 YILLIPGALGSY-KTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPER----KFEVQFFMKDAEYAVDLMEAL---KLEP 115 (277)
T ss_pred eeEecccccccc-cccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcc----cchHHHHHHhHHHHHHHHHHh---CCCC
Confidence 566667765543 34577776655542 49999999999886421100 000112246667777766554 4579
Q ss_pred EEEEEecccHHHHHHHHHcCCCceeEEEEeCCc--ccccccccCCCCCCChhhh--------cccCCCCCh----hHHHH
Q 004866 575 LAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPF--LDATNTLLYPILPLIAADY--------EEFGYPGDI----DDFHA 640 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~--~d~~~~~~~~~~~~~~~~~--------~~~g~~~~~----~~~~~ 640 (726)
..|+|+|-||..++.+|+++++.+...|....- ++-...|....+.-...|- .-||.-.-+ +..+.
T Consensus 116 fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~Yg~e~f~~~wa~wvD~ 195 (277)
T KOG2984|consen 116 FSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDHYGPETFRTQWAAWVDV 195 (277)
T ss_pred eeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHhcCHHHHHHHHHHHHHH
Confidence 999999999999999999999876655544332 2222222222211111110 112211000 01111
Q ss_pred HHhcCc------ccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHH
Q 004866 641 IRNYSP------YDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESA 714 (726)
Q Consensus 641 ~~~~sp------~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~ 714 (726)
..++-- ...+-.++++|+|++||+.|+.|+-.+..-+-..+..+. +.+.++++|.+--++.. +-..
T Consensus 196 v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a~-------~~~~peGkHn~hLrya~-eFnk 267 (277)
T KOG2984|consen 196 VDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLAK-------VEIHPEGKHNFHLRYAK-EFNK 267 (277)
T ss_pred HHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccce-------EEEccCCCcceeeechH-HHHH
Confidence 122111 112223489999999999999999887654433333322 23368899975432211 1122
Q ss_pred HHHHHHHH
Q 004866 715 LETAFLIK 722 (726)
Q Consensus 715 ~~~~fl~~ 722 (726)
.+.+||.+
T Consensus 268 lv~dFl~~ 275 (277)
T KOG2984|consen 268 LVLDFLKS 275 (277)
T ss_pred HHHHHHhc
Confidence 35677764
No 168
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.17 E-value=6.8e-05 Score=77.34 Aligned_cols=141 Identities=8% Similarity=0.138 Sum_probs=96.6
Q ss_pred eCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCcee
Q 004866 129 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDA 207 (726)
Q Consensus 129 ~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~ 207 (726)
++-|++.++... .+|+ .|-|+|.++|+...... .+++..+.-+|||+.++.. +...+||.+++.++...
T Consensus 367 ~~~~~e~~vigt-~dgD---~l~iyd~~~~e~kr~e~~lg~I~av~vs~dGK~~vva-----Ndr~el~vididngnv~- 436 (668)
T COG4946 367 IQVDPEGDVIGT-NDGD---KLGIYDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVA-----NDRFELWVIDIDNGNVR- 436 (668)
T ss_pred EccCCcceEEec-cCCc---eEEEEecCCceEEEeeCCccceEEEEEcCCCcEEEEE-----cCceEEEEEEecCCCee-
Confidence 444455444432 2332 48899999998665433 5677889999999988775 23458999999988532
Q ss_pred EEeeecCCceEEEEEEcCCCcEEEEEEcCCC-ceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEEecCc
Q 004866 208 LLLEESNENVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDAA 282 (726)
Q Consensus 208 lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~-~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~~ 282 (726)
++ +.......+++.|||+++||++.-..+- +..|.++|..+ ++.-.++... .+..+.+++||+.|||++++.
T Consensus 437 ~i-dkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~--~Kiy~vTT~ta~DfsPaFD~d~ryLYfLs~Rs 510 (668)
T COG4946 437 LI-DKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG--GKIYDVTTPTAYDFSPAFDPDGRYLYFLSARS 510 (668)
T ss_pred Ee-cccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC--CeEEEecCCcccccCcccCCCCcEEEEEeccc
Confidence 22 2333344568899999999998765442 36788899887 4444444433 355667889999999999864
No 169
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.12 E-value=0.00029 Score=62.58 Aligned_cols=144 Identities=18% Similarity=0.201 Sum_probs=81.4
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccc-cccCCCCcH-HHHHHHHHHHHHcCCCCC
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG-RRTKKLNSI-KDFISCARFLIEKEIVKE 572 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~-~~~~~~~~~-~D~~~~~~~l~~~~~~d~ 572 (726)
-+||..||.-.....+........|+.+||.|+.+++.---.. .... +...+..+. ...+.++..|.+. .+.
T Consensus 15 ~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~R----rtg~rkPp~~~~t~~~~~~~~~aql~~~--l~~ 88 (213)
T COG3571 15 VTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAAR----RTGRRKPPPGSGTLNPEYIVAIAQLRAG--LAE 88 (213)
T ss_pred EEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhc----cccCCCCcCccccCCHHHHHHHHHHHhc--ccC
Confidence 4677889864443333344556789999999999997522110 0000 011111222 3344555555543 355
Q ss_pred CcEEEEEecccHHHHHHHHHcCCCceeEEEEe-CCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCcccccc
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLE-VPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQ 651 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~-~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~ 651 (726)
.++.|.|+||||-++.+++..----+.+.+|. +||.- -|.|+. . + ..++.
T Consensus 89 gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhp-------------------pGKPe~---~---R----t~HL~ 139 (213)
T COG3571 89 GPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHP-------------------PGKPEQ---L---R----TEHLT 139 (213)
T ss_pred CceeeccccccchHHHHHHHhhcCCcceEEEecCccCC-------------------CCCccc---c---h----hhhcc
Confidence 78999999999998887765422123333321 22211 134431 1 1 23455
Q ss_pred cCCCCCeEEEEecCCCCcChHHH
Q 004866 652 KDVLYPAVLVTSSFNTRFGVWEA 674 (726)
Q Consensus 652 ~~~~~P~lli~g~~D~~V~~~~~ 674 (726)
. +++|+||.||..|..=.-.+.
T Consensus 140 g-l~tPtli~qGtrD~fGtr~~V 161 (213)
T COG3571 140 G-LKTPTLITQGTRDEFGTRDEV 161 (213)
T ss_pred C-CCCCeEEeecccccccCHHHH
Confidence 5 899999999999965444443
No 170
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.11 E-value=0.0024 Score=67.89 Aligned_cols=261 Identities=15% Similarity=0.143 Sum_probs=129.3
Q ss_pred eceeeCCCCCEEEEEEeCC--CCcEEEEEEEECCCCceecccc-c---cccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 125 ELSEVSPDHKFLAYTMYDK--DNDYFTLSVRNLNSGALCSKPQ-A---VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~--g~e~~~l~v~dl~tg~~~~~~~-~---~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
+.+.+|||+++| |+.+.. .......+-++-++|....+.. . .....++.+||++.||...+. ...|..+
T Consensus 40 s~l~~~~~~~~L-Y~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~----~g~v~v~ 114 (345)
T PF10282_consen 40 SWLAVSPDGRRL-YVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYG----GGSVSVF 114 (345)
T ss_dssp CCEEE-TTSSEE-EEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETT----TTEEEEE
T ss_pred ceEEEEeCCCEE-EEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEcc----CCeEEEE
Confidence 345789999977 655554 2334445555665566554322 1 122457889999999887543 2367777
Q ss_pred EcCCCC-ceeE--Ee--e--ec-----CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEE---e--eccC
Q 004866 199 IIGSTD-EDAL--LL--E--ES-----NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL---I--WECE 261 (726)
Q Consensus 199 ~l~t~~-~~~l--v~--~--~~-----d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~---l--~~~~ 261 (726)
++.... .... +. . .+ .....-.+.++|||+++++.... ...|++++++...+++.. + ....
T Consensus 115 ~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG--~D~v~~~~~~~~~~~l~~~~~~~~~~G~ 192 (345)
T PF10282_consen 115 PLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLG--ADRVYVYDIDDDTGKLTPVDSIKVPPGS 192 (345)
T ss_dssp EECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETT--TTEEEEEEE-TTS-TEEEEEEEECSTTS
T ss_pred EccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecC--CCEEEEEEEeCCCceEEEeeccccccCC
Confidence 776532 1111 11 1 01 11222356789999999876543 346777777654333322 1 1222
Q ss_pred CceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceE---E--eecCC--CceEEEEeee--CCEEEEE
Q 004866 262 GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES---V--FIDDQ--GLVVEDVDFC--KTHMALI 332 (726)
Q Consensus 262 ~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---v--~~~~~--~~~l~~~~~~--~~~lv~~ 332 (726)
+.....++++|+.+|++..... ...++.++.. ...++. + ++... .....++.+. +++||+.
T Consensus 193 GPRh~~f~pdg~~~Yv~~e~s~------~v~v~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvs 262 (345)
T PF10282_consen 193 GPRHLAFSPDGKYAYVVNELSN------TVSVFDYDPS----DGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVS 262 (345)
T ss_dssp SEEEEEE-TTSSEEEEEETTTT------EEEEEEEETT----TTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEE
T ss_pred CCcEEEEcCCcCEEEEecCCCC------cEEEEeeccc----CCceeEEEEeeeccccccccCCceeEEEecCCCEEEEE
Confidence 2345567788888888765432 2334444421 122221 1 11111 1134445544 5667766
Q ss_pred EEeCCeeEEEEEecCCCCCCcceeecccccccccCCCc-eeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004866 333 LREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKY-VSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 411 (726)
Q Consensus 333 ~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~ 411 (726)
-+. ...|.+++++...++ +... ..++.... -. ++.++++++.+++.-.. ..--.+|.+|.++|.+.
T Consensus 263 nr~--~~sI~vf~~d~~~g~----l~~~--~~~~~~G~~Pr----~~~~s~~g~~l~Va~~~-s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 263 NRG--SNSISVFDLDPATGT----LTLV--QTVPTGGKFPR----HFAFSPDGRYLYVANQD-SNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp ECT--TTEEEEEEECTTTTT----EEEE--EEEEESSSSEE----EEEE-TTSSEEEEEETT-TTEEEEEEEETTTTEEE
T ss_pred ecc--CCEEEEEEEecCCCc----eEEE--EEEeCCCCCcc----EEEEeCCCCEEEEEecC-CCeEEEEEEeCCCCcEE
Confidence 554 344555555322121 1100 11111000 01 12235677766554433 33357778888899887
Q ss_pred EEEe
Q 004866 412 IIQQ 415 (726)
Q Consensus 412 ~~~~ 415 (726)
....
T Consensus 330 ~~~~ 333 (345)
T PF10282_consen 330 PVGS 333 (345)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 7654
No 171
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.11 E-value=1.6e-05 Score=63.99 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=57.9
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcH
Q 004866 475 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSI 554 (726)
Q Consensus 475 G~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~ 554 (726)
|.+|.+..+.|++. +..+|+++||-...+ ..|...++.|+++||.|+..|.||+|.+.. . ......+
T Consensus 1 G~~L~~~~w~p~~~----~k~~v~i~HG~~eh~--~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g------~-rg~~~~~ 67 (79)
T PF12146_consen 1 GTKLFYRRWKPENP----PKAVVVIVHGFGEHS--GRYAHLAEFLAEQGYAVFAYDHRGHGRSEG------K-RGHIDSF 67 (79)
T ss_pred CcEEEEEEecCCCC----CCEEEEEeCCcHHHH--HHHHHHHHHHHhCCCEEEEECCCcCCCCCC------c-ccccCCH
Confidence 66788877777642 467999999864433 357888999999999999999999998742 1 1224678
Q ss_pred HHHHHHHHHHH
Q 004866 555 KDFISCARFLI 565 (726)
Q Consensus 555 ~D~~~~~~~l~ 565 (726)
+++++.+..++
T Consensus 68 ~~~v~D~~~~~ 78 (79)
T PF12146_consen 68 DDYVDDLHQFI 78 (79)
T ss_pred HHHHHHHHHHh
Confidence 88877776654
No 172
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.10 E-value=2.4e-05 Score=78.80 Aligned_cols=123 Identities=24% Similarity=0.348 Sum_probs=83.8
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCc-----cchHHHHHHHH-CCcEEEEEccCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK-----RWRSELKSLLD-RGWVVAFADVRG 533 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~-----~~~~~~~~l~~-~G~~v~~~d~RG 533 (726)
......+++.+.. |+..|.+..+.-++.+ .. -.||+.-|. +..+.. .....++.++. .|..|+..||||
T Consensus 107 ~~~~~~kRv~Iq~-D~~~IDt~~I~~~~a~-~~--RWiL~s~GN-g~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpG 181 (365)
T PF05677_consen 107 DEVSSVKRVPIQY-DGVKIDTMAIHQPEAK-PQ--RWILVSNGN-GECYENRAMLDYKDDWIQRFAKELGANVLVFNYPG 181 (365)
T ss_pred ccccceeeEEEee-CCEEEEEEEeeCCCCC-CC--cEEEEEcCC-hHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCc
Confidence 3445677788876 9999998776644432 23 356665542 222211 12234555555 699999999999
Q ss_pred CCCCCCcccccccccCCCCcHHHHHHHHHHHHHcC-CCCCCcEEEEEecccHHHHHHHHHcC
Q 004866 534 GGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE-IVKEHKLAGWGYSAGGLLVAAAINCC 594 (726)
Q Consensus 534 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~-~~d~~ri~i~G~S~GG~l~~~~~~~~ 594 (726)
-|.+ .|... ...-+.|..++++||.++. -+.+++|.++|+|.||.+++.++..+
T Consensus 182 Vg~S------~G~~s-~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 182 VGSS------TGPPS-RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred cccC------CCCCC-HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhc
Confidence 8865 23332 2456788999999999754 46889999999999999988876653
No 173
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.09 E-value=1.8e-05 Score=83.64 Aligned_cols=144 Identities=19% Similarity=0.180 Sum_probs=103.9
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCc----cchHHHHHHHHCCcEEEEEccCCCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK----RWRSELKSLLDRGWVVAFADVRGGG 535 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~----~~~~~~~~l~~~G~~v~~~d~RG~g 535 (726)
...|.+|...+.+.||..+.. .-.|... ++.|+|+..||-..++... .-....-.|+++||-|-+-|.|| .
T Consensus 43 ~~gy~~E~h~V~T~DgYiL~l-hRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RG-n 117 (403)
T KOG2624|consen 43 KYGYPVEEHEVTTEDGYILTL-HRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRG-N 117 (403)
T ss_pred HcCCceEEEEEEccCCeEEEE-eeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcC-c
Confidence 457889999999999984433 3344432 6789999999965543211 01233456788999999999999 6
Q ss_pred CCCCcccccccc--------cCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCC---ceeEEEEe
Q 004866 536 GGGKKWHHDGRR--------TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD---LFRAVVLE 604 (726)
Q Consensus 536 ~~g~~~~~~~~~--------~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~---~f~a~v~~ 604 (726)
.|++.-...... .+..-...|+-|.++++.+. +..+++..+|||.|+.....++...|+ .++.+++.
T Consensus 118 ~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~--T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aL 195 (403)
T KOG2624|consen 118 TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEK--TGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIAL 195 (403)
T ss_pred ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHh--ccccceEEEEEEccchhheehhcccchhhhhhheeeee
Confidence 666553322221 12234678999999999864 567899999999999998888888776 68889999
Q ss_pred CCcccc
Q 004866 605 VPFLDA 610 (726)
Q Consensus 605 ~p~~d~ 610 (726)
+|++-+
T Consensus 196 AP~~~~ 201 (403)
T KOG2624|consen 196 APAAFP 201 (403)
T ss_pred cchhhh
Confidence 998733
No 174
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=98.05 E-value=0.0008 Score=71.07 Aligned_cols=204 Identities=16% Similarity=0.117 Sum_probs=124.1
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc--cccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
..-++||-|++++|-..- + .|.|++..+-..+... ...++.+++|||-+.-|+|-.-..++.+.++-++.+.
T Consensus 308 WP~frWS~DdKy~Arm~~---~---sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evP 381 (698)
T KOG2314|consen 308 WPIFRWSHDDKYFARMTG---N---SISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVP 381 (698)
T ss_pred cceEEeccCCceeEEecc---c---eEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecC
Confidence 345799999999998742 1 3778887664433321 1457789999999999999765555667778788877
Q ss_pred CCCc--eeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCc---------eEEEEEeCCCCCCCeEEeeccCCceEEeeee
Q 004866 202 STDE--DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTS---------SKVFLINAADPFSGLTLIWECEGLAHCIVEH 270 (726)
Q Consensus 202 t~~~--~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~---------~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~ 270 (726)
+.+. ..-++...| +.+.|-++|+||++...+.+. -+|+.++-.. -.+..+.-...-....|+|
T Consensus 382 s~~~iRt~nlfnVsD----ckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKd--Ipve~velke~vi~FaWEP 455 (698)
T KOG2314|consen 382 SKREIRTKNLFNVSD----CKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKD--IPVEVVELKESVIAFAWEP 455 (698)
T ss_pred ccceeeeccceeeec----cEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccC--CCceeeecchheeeeeecc
Confidence 6641 122343333 346789999999998876542 2455554333 2222332233334567889
Q ss_pred cCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCC-CceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 271 HEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ-GLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 271 ~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~-~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
.|+.|.+++-.... .+...|.+... ..+|.-|..-+. ...--.+++.+..+++.........|..+|.+
T Consensus 456 ~gdkF~vi~g~~~k----~tvsfY~~e~~----~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~ 525 (698)
T KOG2314|consen 456 HGDKFAVISGNTVK----NTVSFYAVETN----IKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTD 525 (698)
T ss_pred CCCeEEEEEccccc----cceeEEEeecC----CCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecc
Confidence 99999988854321 24555555422 234443221111 11122455566788877766555677778765
No 175
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=98.04 E-value=0.00012 Score=74.89 Aligned_cols=113 Identities=22% Similarity=0.304 Sum_probs=71.3
Q ss_pred CCccEEEEEcCCCCCCCCcc-c----hHHHHHHHH-------CCcEEEEEccCCCC-C-CCCc-ccccccc---cCCCCc
Q 004866 492 NQNPGLLHGHGAYGELLDKR-W----RSELKSLLD-------RGWVVAFADVRGGG-G-GGKK-WHHDGRR---TKKLNS 553 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~-~----~~~~~~l~~-------~G~~v~~~d~RG~g-~-~g~~-~~~~~~~---~~~~~~ 553 (726)
.+..+||..|+-.+.+.... + .-.++.|+. .-|.|++.|+-|+. + .|.. ....++. .....+
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 34578999998544221111 0 012333333 34999999999876 2 2221 1111111 123367
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEE-EEEecccHHHHHHHHHcCCCceeEEEEeCC
Q 004866 554 IKDFISCARFLIEKEIVKEHKLA-GWGYSAGGLLVAAAINCCPDLFRAVVLEVP 606 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~~ri~-i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p 606 (726)
+.|.+.+-+.|+++--+ ++++ |+|+||||+.++..+..+|++...+|..+.
T Consensus 129 i~D~V~aq~~ll~~LGI--~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~ 180 (368)
T COG2021 129 IRDMVRAQRLLLDALGI--KKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIAT 180 (368)
T ss_pred HHHHHHHHHHHHHhcCc--ceEeeeeccChHHHHHHHHHHhChHHHhhhheecc
Confidence 89999998888765333 4555 999999999999999999998877776654
No 176
>PRK10115 protease 2; Provisional
Probab=98.04 E-value=0.0023 Score=74.07 Aligned_cols=247 Identities=6% Similarity=-0.106 Sum_probs=138.4
Q ss_pred CeeECCeEEEEEecCCcceEEEEEEecCCccccccCCCCCCCcccCCCCCCcEEEeecccccccCCceEEeeceeeCCCC
Q 004866 54 PLRWGPWLYYRRVEEGKQYLVLCRRLVSLNEEFISHKSPAAGFDFTSGKKIEQKLLDYNQEAERFGGYAYEELSEVSPDH 133 (726)
Q Consensus 54 p~~~g~~~yy~~~~~g~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG 133 (726)
++++|.++.|.....|.+...++.+.... + ++|.++ +... . ..+.|+|||
T Consensus 134 ~Spdg~~la~~~d~~G~E~~~l~v~d~~t--------------------g--~~l~~~--i~~~-----~-~~~~w~~D~ 183 (686)
T PRK10115 134 ITPDNTIMALAEDFLSRRQYGIRFRNLET--------------------G--NWYPEL--LDNV-----E-PSFVWANDS 183 (686)
T ss_pred ECCCCCEEEEEecCCCcEEEEEEEEECCC--------------------C--CCCCcc--ccCc-----c-eEEEEeeCC
Confidence 36788899999998898888888876521 1 111111 1111 1 236899999
Q ss_pred CEEEEEEeCCC-CcEEEEEEEECCCC--ceecccc--ccccceeEEec-CCCEEEEEEecCCCCCceEEEEEcC--CCCc
Q 004866 134 KFLAYTMYDKD-NDYFTLSVRNLNSG--ALCSKPQ--AVRVSNIAWAK-DGQALIYVVTDQNKRPYQIYCSIIG--STDE 205 (726)
Q Consensus 134 ~~la~~~~~~g-~e~~~l~v~dl~tg--~~~~~~~--~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~l~~~~l~--t~~~ 205 (726)
+.|.|+....+ ....+||..++.|+ +...+.. ...+.-..|.+ |++++++..... ....+++++.. ++..
T Consensus 184 ~~~~y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~--~~~~~~l~~~~~~~~~~ 261 (686)
T PRK10115 184 WTFYYVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASA--TTSEVLLLDAELADAEP 261 (686)
T ss_pred CEEEEEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECC--ccccEEEEECcCCCCCc
Confidence 99999877543 24578999999998 3333322 11222234555 999888654433 23467776643 2222
Q ss_pred eeEEeeecCCceEEEEEEcCCCcEEEEEEcCC-CceEEEEEeCCCCCCCeEEeeccCCc-eEEeeeecCCEEEEEecCcc
Q 004866 206 DALLLEESNENVYVNIRHTKDFHFVCVHTFST-TSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLFTDAAK 283 (726)
Q Consensus 206 ~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~-~~~~l~~~d~~~~~~~~~~l~~~~~~-~~~~~~~~g~~l~~~t~~~~ 283 (726)
..++..+.+..+.+ . ..+..+++.++.+ ....|..+++.+. +.++.+.+...+ ..-.+...++.|++..+..+
T Consensus 262 ~~~~~~~~~~~~~~--~--~~~~~ly~~tn~~~~~~~l~~~~~~~~-~~~~~l~~~~~~~~i~~~~~~~~~l~~~~~~~g 336 (686)
T PRK10115 262 FVFLPRRKDHEYSL--D--HYQHRFYLRSNRHGKNFGLYRTRVRDE-QQWEELIPPRENIMLEGFTLFTDWLVVEERQRG 336 (686)
T ss_pred eEEEECCCCCEEEE--E--eCCCEEEEEEcCCCCCceEEEecCCCc-ccCeEEECCCCCCEEEEEEEECCEEEEEEEeCC
Confidence 22232333333322 1 2346677777654 4577888888743 456777766432 22234445778888877654
Q ss_pred cCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEe----eeCCEEEEEEEeCCe-eEEEEEecCC
Q 004866 284 EGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVD----FCKTHMALILREGRT-YRLCSVSLPL 348 (726)
Q Consensus 284 ~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~----~~~~~lv~~~~~~g~-~~l~~~~l~~ 348 (726)
..+|+.++.. . .....+....+.. ...+. ...+.+++....-.. ..++.+|+.+
T Consensus 337 ------~~~l~~~~~~-~---~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~ 395 (686)
T PRK10115 337 ------LTSLRQINRK-T---REVIGIAFDDPAY-VTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDT 395 (686)
T ss_pred ------EEEEEEEcCC-C---CceEEecCCCCce-EeeecccCCCCCceEEEEEecCCCCCEEEEEECCC
Confidence 3567777764 1 2333332122211 22111 223456666555444 4788888764
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.04 E-value=8.2e-05 Score=77.12 Aligned_cols=236 Identities=17% Similarity=0.165 Sum_probs=125.8
Q ss_pred cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHH
Q 004866 476 ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIK 555 (726)
Q Consensus 476 ~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~ 555 (726)
..+.+.+..|++....++.|+++..||........ ......++..++.++..+....++.+-..+..... .....
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~ 105 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQS--LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADS---EGYAE 105 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCc--chHHHHhhhceeEEeeeccccccccccccccccCc---ccccc
Confidence 56778888888755446899999999864433211 12567788889998887752222211111100000 00011
Q ss_pred HHHHHHHHHHHc---------CCCCCCcEEEEEecccHHHHHHHHHcCC---CceeEEEEeCCcccccccccC-------
Q 004866 556 DFISCARFLIEK---------EIVKEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPFLDATNTLLY------- 616 (726)
Q Consensus 556 D~~~~~~~l~~~---------~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~d~~~~~~~------- 616 (726)
++.......... .....++....|.+.||..+..++...+ +..+.++...++-........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~ 185 (299)
T COG1073 106 DFSAAVLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELA 185 (299)
T ss_pred ccchhheeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHH
Confidence 111111111110 1113367888888888888888777665 222222222221111110000
Q ss_pred -CCCCCC--hhhhcc-------cCCCCChhHHHHHHhcCcccccccCCC-CCeEEEEecCCCCcChHHHHHHHHHHHhcC
Q 004866 617 -PILPLI--AADYEE-------FGYPGDIDDFHAIRNYSPYDNIQKDVL-YPAVLVTSSFNTRFGVWEAAKWVARVREST 685 (726)
Q Consensus 617 -~~~~~~--~~~~~~-------~g~~~~~~~~~~~~~~sp~~~i~~~~~-~P~lli~g~~D~~V~~~~~~~~~~~L~~~~ 685 (726)
...+.. ...+.. +..+. .. ...+...++...+.+ +. .|+|++||..|..||..++.+++.+.+...
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~~-i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~ 262 (299)
T COG1073 186 RELIDYLITPGGFAPLPAPEAPLDTLP-LR-AVLLLLLDPFDDAEK-ISPRPVLLVHGERDEVVPLRDAEDLYEAARERP 262 (299)
T ss_pred HhhhhhhccCCCCCCCCcccccccccc-cc-hhhhccCcchhhHhh-cCCcceEEEecCCCcccchhhhHHHHhhhccCC
Confidence 000000 000000 00000 01 223555667776765 55 799999999999999999999999998842
Q ss_pred CCCCCCcEEEEcCCCCCCCc--hhhHHHHHHHHHHHHHHhh
Q 004866 686 IYDPKRPILLNLTTDIVEEN--RYLQCKESALETAFLIKMM 724 (726)
Q Consensus 686 ~~~~~~~~~~~~~~gH~~~~--~~~~~~~~~~~~~fl~~~l 724 (726)
...+++++++|.... .........+...|+.++|
T Consensus 263 -----~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 263 -----KKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred -----ceEEEecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 123337888897653 3333455667789998876
No 178
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=98.04 E-value=0.00026 Score=67.75 Aligned_cols=215 Identities=13% Similarity=0.137 Sum_probs=111.1
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCC-CCCccccccccc
Q 004866 470 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGG-GGKKWHHDGRRT 548 (726)
Q Consensus 470 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~-~g~~~~~~~~~~ 548 (726)
+.-.+|.+|..|-..|+... ..+.|+||..-| ++..+ ..|...+.+|+..||.|+.+|.--|=| +...- ...
T Consensus 7 i~~~~~~~I~vwet~P~~~~-~~~~~tiliA~G-f~rrm-dh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I----~ef 79 (294)
T PF02273_consen 7 IRLEDGRQIRVWETRPKNNE-PKRNNTILIAPG-FARRM-DHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDI----NEF 79 (294)
T ss_dssp EEETTTEEEEEEEE---TTS----S-EEEEE-T-T-GGG-GGGHHHHHHHHTTT--EEEE---B----------------
T ss_pred eEcCCCCEEEEeccCCCCCC-cccCCeEEEecc-hhHHH-HHHHHHHHHHhhCCeEEEeccccccccCCCCCh----hhc
Confidence 45578999999999998754 456788888775 45443 568889999999999999999654422 11110 000
Q ss_pred CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccccc----CCCCCCChh
Q 004866 549 KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLL----YPILPLIAA 624 (726)
Q Consensus 549 ~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~----~~~~~~~~~ 624 (726)
.-....+|+..+++||.+.|. .++|++-.|.-|=++...++. ++ ..-+|..+|++|+..++- +..+.....
T Consensus 80 tms~g~~sL~~V~dwl~~~g~---~~~GLIAaSLSaRIAy~Va~~-i~-lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~ 154 (294)
T PF02273_consen 80 TMSIGKASLLTVIDWLATRGI---RRIGLIAASLSARIAYEVAAD-IN-LSFLITAVGVVNLRDTLEKALGYDYLQLPIE 154 (294)
T ss_dssp -HHHHHHHHHHHHHHHHHTT------EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-HHHHHHHHHSS-GGGS-GG
T ss_pred chHHhHHHHHHHHHHHHhcCC---CcchhhhhhhhHHHHHHHhhc-cC-cceEEEEeeeeeHHHHHHHHhccchhhcchh
Confidence 001235788899999998765 579999999999999999985 55 567788889999876531 111100000
Q ss_pred hh---ccc-CCCCChhHH-HHHHh--c----CcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcE
Q 004866 625 DY---EEF-GYPGDIDDF-HAIRN--Y----SPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPI 693 (726)
Q Consensus 625 ~~---~~~-g~~~~~~~~-~~~~~--~----sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 693 (726)
.. ..+ |.--..+.+ ....+ + |-...++. ...|.+.+++..|.-|-..+..++.+.+.... --
T Consensus 155 ~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~-l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~------~k 227 (294)
T PF02273_consen 155 QLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKR-LSIPFIAFTANDDDWVKQSEVEELLDNINSNK------CK 227 (294)
T ss_dssp G--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT---S-EEEEEETT-TTS-HHHHHHHHTT-TT--------EE
T ss_pred hCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhh-CCCCEEEEEeCCCccccHHHHHHHHHhcCCCc------ee
Confidence 00 000 111111111 11111 1 22334554 78999999999999998777776665554422 23
Q ss_pred EE-EcCCCCCC
Q 004866 694 LL-NLTTDIVE 703 (726)
Q Consensus 694 ~~-~~~~gH~~ 703 (726)
++ .+|++|-.
T Consensus 228 lysl~Gs~HdL 238 (294)
T PF02273_consen 228 LYSLPGSSHDL 238 (294)
T ss_dssp EEEETT-SS-T
T ss_pred EEEecCccchh
Confidence 44 79999964
No 179
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.04 E-value=0.0032 Score=66.65 Aligned_cols=144 Identities=15% Similarity=0.156 Sum_probs=80.1
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECC-CCceeccc---cccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN-SGALCSKP---QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~-tg~~~~~~---~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+.+||||++|+.+.... ..|.+++++ +|+..... .......+.++|||+.||.+... ...|..+++.
T Consensus 39 ~l~~spd~~~lyv~~~~~----~~i~~~~~~~~g~l~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~----~~~v~v~~~~ 110 (330)
T PRK11028 39 PMVISPDKRHLYVGVRPE----FRVLSYRIADDGALTFAAESPLPGSPTHISTDHQGRFLFSASYN----ANCVSVSPLD 110 (330)
T ss_pred cEEECCCCCEEEEEECCC----CcEEEEEECCCCceEEeeeecCCCCceEEEECCCCCEEEEEEcC----CCeEEEEEEC
Confidence 457999999886653322 246777775 45432221 12244678999999988776432 2467777775
Q ss_pred CCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeE-------EeeccCCceEEeeeecCC
Q 004866 202 STD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-------LIWECEGLAHCIVEHHEG 273 (726)
Q Consensus 202 t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-------~l~~~~~~~~~~~~~~g~ 273 (726)
+.. ....+........-..+.++|||++|++.... ...|+++|+.+. +.+. .+..........++++|+
T Consensus 111 ~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~--~~~v~v~d~~~~-g~l~~~~~~~~~~~~g~~p~~~~~~pdg~ 187 (330)
T PRK11028 111 KDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLK--EDRIRLFTLSDD-GHLVAQEPAEVTTVEGAGPRHMVFHPNQQ 187 (330)
T ss_pred CCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCC--CCEEEEEEECCC-CcccccCCCceecCCCCCCceEEECCCCC
Confidence 422 11111111111111235689999999876543 346788887652 2221 111122223446678888
Q ss_pred EEEEEec
Q 004866 274 FLYLFTD 280 (726)
Q Consensus 274 ~l~~~t~ 280 (726)
.+|+...
T Consensus 188 ~lyv~~~ 194 (330)
T PRK11028 188 YAYCVNE 194 (330)
T ss_pred EEEEEec
Confidence 7777643
No 180
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.03 E-value=6.7e-05 Score=73.69 Aligned_cols=166 Identities=14% Similarity=0.128 Sum_probs=79.9
Q ss_pred CccEEEEEcCCCCCCCCccchH----HHHHHHHCCcEEEEEccCC-----C---------------CCCCCccccccccc
Q 004866 493 QNPGLLHGHGAYGELLDKRWRS----ELKSLLDRGWVVAFADVRG-----G---------------GGGGKKWHHDGRRT 548 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~----~~~~l~~~G~~v~~~d~RG-----~---------------g~~g~~~~~~~~~~ 548 (726)
+.|-||.+||...+ ..-|.. ....|.+.++-++.+|-+- . .+....|.......
T Consensus 3 ~k~riLcLHG~~~n--a~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYGQN--AEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT----HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCCcC--HHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 35778999985432 233433 3344444489899888541 1 11223444433221
Q ss_pred CCCCcHHHHHHHHHHHHH----cCCCCCCcEEEEEecccHHHHHHHHHcC--------CCceeEEEEeCCcccccccccC
Q 004866 549 KKLNSIKDFISCARFLIE----KEIVKEHKLAGWGYSAGGLLVAAAINCC--------PDLFRAVVLEVPFLDATNTLLY 616 (726)
Q Consensus 549 ~~~~~~~D~~~~~~~l~~----~~~~d~~ri~i~G~S~GG~l~~~~~~~~--------p~~f~a~v~~~p~~d~~~~~~~ 616 (726)
....++.+++++|.+ +|-. .||+|+|.||.+++.++... ...||.+|+.+++.-....
T Consensus 81 ---~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~--- 150 (212)
T PF03959_consen 81 ---HEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD--- 150 (212)
T ss_dssp ---GGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE----
T ss_pred ---ccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh---
Confidence 234444455555443 3433 59999999999998887531 2357899988886532110
Q ss_pred CCCCCChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEE
Q 004866 617 PILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLN 696 (726)
Q Consensus 617 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 696 (726)
+ ..+. ....++.|+|-|+|..|..+++..+.++++..... ..++.
T Consensus 151 ---------~------------------~~~~-~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~-------~~v~~ 195 (212)
T PF03959_consen 151 ---------Y------------------QELY-DEPKISIPTLHVIGENDPVVPPERSEALAEMFDPD-------ARVIE 195 (212)
T ss_dssp ---------G------------------TTTT---TT---EEEEEEETT-SSS-HHHHHHHHHHHHHH-------EEEEE
T ss_pred ---------h------------------hhhh-ccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCC-------cEEEE
Confidence 0 0000 11136889999999999999999999999999873 12335
Q ss_pred cCCCCCCCc
Q 004866 697 LTTDIVEEN 705 (726)
Q Consensus 697 ~~~gH~~~~ 705 (726)
-++||....
T Consensus 196 h~gGH~vP~ 204 (212)
T PF03959_consen 196 HDGGHHVPR 204 (212)
T ss_dssp ESSSSS---
T ss_pred ECCCCcCcC
Confidence 688997544
No 181
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=98.01 E-value=0.0013 Score=69.49 Aligned_cols=198 Identities=11% Similarity=0.045 Sum_probs=100.1
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCC-Ccee---cccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-GALC---SKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t-g~~~---~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+.++|||++|..+. ..+ ..|.++++++ |... .... ......+.++|||+.||.... ....|+++++
T Consensus 84 ~i~~~~~g~~l~v~~-~~~---~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~----~~~~v~v~d~ 155 (330)
T PRK11028 84 HISTDHQGRFLFSAS-YNA---NCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCL----KEDRIRLFTL 155 (330)
T ss_pred EEEECCCCCEEEEEE-cCC---CeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeC----CCCEEEEEEE
Confidence 467999999886553 322 2488888864 3221 1111 123355789999998877643 2347888888
Q ss_pred CCCCc-e-----eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeec---cCC---c----e
Q 004866 201 GSTDE-D-----ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE---CEG---L----A 264 (726)
Q Consensus 201 ~t~~~-~-----~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~---~~~---~----~ 264 (726)
.+... . .........+ ..+.++|||+++++..... +.|.+++++...++.+.+.. ... + .
T Consensus 156 ~~~g~l~~~~~~~~~~~~g~~p--~~~~~~pdg~~lyv~~~~~--~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 231 (330)
T PRK11028 156 SDDGHLVAQEPAEVTTVEGAGP--RHMVFHPNQQYAYCVNELN--SSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAA 231 (330)
T ss_pred CCCCcccccCCCceecCCCCCC--ceEEECCCCCEEEEEecCC--CEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccce
Confidence 65321 0 0011111222 2468899999998765433 45666665432123222211 100 1 1
Q ss_pred EEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCce--EEeecC-CCceEEEEeeeCCEEEEEEEeCCeeEE
Q 004866 265 HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWE--SVFIDD-QGLVVEDVDFCKTHMALILREGRTYRL 341 (726)
Q Consensus 265 ~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~v~~~~-~~~~l~~~~~~~~~lv~~~~~~g~~~l 341 (726)
...++|+|+.+|. +++... ...++.++.+ ...++ ..++.. ....+ .+...+++|++....++.-.+
T Consensus 232 ~i~~~pdg~~lyv-~~~~~~-----~I~v~~i~~~----~~~~~~~~~~~~~~~p~~~-~~~~dg~~l~va~~~~~~v~v 300 (330)
T PRK11028 232 DIHITPDGRHLYA-CDRTAS-----LISVFSVSED----GSVLSFEGHQPTETQPRGF-NIDHSGKYLIAAGQKSHHISV 300 (330)
T ss_pred eEEECCCCCEEEE-ecCCCC-----eEEEEEEeCC----CCeEEEeEEEeccccCCce-EECCCCCEEEEEEccCCcEEE
Confidence 2345678877766 454321 2334444322 11221 111111 11111 344556788877655655555
Q ss_pred EEEec
Q 004866 342 CSVSL 346 (726)
Q Consensus 342 ~~~~l 346 (726)
+.++.
T Consensus 301 ~~~~~ 305 (330)
T PRK11028 301 YEIDG 305 (330)
T ss_pred EEEcC
Confidence 55553
No 182
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.98 E-value=9.9e-05 Score=71.23 Aligned_cols=183 Identities=16% Similarity=0.121 Sum_probs=95.8
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCC--CCC
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI--VKE 572 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~--~d~ 572 (726)
-++.+.|-|-+.. .|......|-. -+.++.+.++|.+.. .+..-+.|+.+.++.|..+-. .-.
T Consensus 9 ~L~cfP~AGGsa~---~fr~W~~~lp~-~iel~avqlPGR~~r-----------~~ep~~~di~~Lad~la~el~~~~~d 73 (244)
T COG3208 9 RLFCFPHAGGSAS---LFRSWSRRLPA-DIELLAVQLPGRGDR-----------FGEPLLTDIESLADELANELLPPLLD 73 (244)
T ss_pred eEEEecCCCCCHH---HHHHHHhhCCc-hhheeeecCCCcccc-----------cCCcccccHHHHHHHHHHHhccccCC
Confidence 3555666554432 23333333322 488999999998753 111244555555665554422 223
Q ss_pred CcEEEEEecccHHHHHHHHHcC------CCceeEEEEeCCcccccccccCCCCCCChh----hhccc-CCCC----ChhH
Q 004866 573 HKLAGWGYSAGGLLVAAAINCC------PDLFRAVVLEVPFLDATNTLLYPILPLIAA----DYEEF-GYPG----DIDD 637 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~----~~~~~-g~~~----~~~~ 637 (726)
...+++||||||.++--++.+. |..|-..-+.+|..+-.... ...... ...++ |.|. ++|.
T Consensus 74 ~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i----~~~~D~~~l~~l~~lgG~p~e~led~El 149 (244)
T COG3208 74 APFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQI----HHLDDADFLADLVDLGGTPPELLEDPEL 149 (244)
T ss_pred CCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCc----cCCCHHHHHHHHHHhCCCChHHhcCHHH
Confidence 5799999999999998887643 22122222333422211100 011111 11122 4442 2332
Q ss_pred H-----------HHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCc
Q 004866 638 F-----------HAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEEN 705 (726)
Q Consensus 638 ~-----------~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~ 705 (726)
. ..+..|.-... . .+.+|+..+.|..|..|...+...|.+..+..= +.. ..++||++..
T Consensus 150 ~~l~LPilRAD~~~~e~Y~~~~~-~-pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f-----~l~--~fdGgHFfl~ 219 (244)
T COG3208 150 MALFLPILRADFRALESYRYPPP-A-PLACPIHAFGGEKDHEVSRDELGAWREHTKGDF-----TLR--VFDGGHFFLN 219 (244)
T ss_pred HHHHHHHHHHHHHHhcccccCCC-C-CcCcceEEeccCcchhccHHHHHHHHHhhcCCc-----eEE--EecCcceehh
Confidence 2 22222222222 2 378999999999999997777666665554321 122 4588998654
No 183
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.97 E-value=0.019 Score=58.24 Aligned_cols=262 Identities=13% Similarity=0.139 Sum_probs=128.4
Q ss_pred eceeeCCCCCEEEEEEeCCCC-cEEEEEEEECCCCceecccc---ccc-cceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 125 ELSEVSPDHKFLAYTMYDKDN-DYFTLSVRNLNSGALCSKPQ---AVR-VSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~-e~~~l~v~dl~tg~~~~~~~---~~~-~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
+-++|+|++++| |+....|. ....-|-+|-++|+...+.. .+. ...++.++||+.+|...+.. ..|-+..
T Consensus 43 tyl~~~~~~~~L-Y~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~----g~v~v~p 117 (346)
T COG2706 43 TYLAVNPDQRHL-YVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHS----GSVSVYP 117 (346)
T ss_pred ceEEECCCCCEE-EEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccC----ceEEEEE
Confidence 445799999987 55555433 23345666777787655432 222 25688999998777664432 2444444
Q ss_pred cCC-C--Cce-eEEee-ec------CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe---EEeeccCCceE
Q 004866 200 IGS-T--DED-ALLLE-ES------NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL---TLIWECEGLAH 265 (726)
Q Consensus 200 l~t-~--~~~-~lv~~-~~------d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~---~~l~~~~~~~~ 265 (726)
+.. + ... .++.. +. ..+..-...++||+++|+...- +..++++++++.+.-.+ ..+.+..+...
T Consensus 118 ~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL--G~Dri~~y~~~dg~L~~~~~~~v~~G~GPRH 195 (346)
T COG2706 118 LQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL--GTDRIFLYDLDDGKLTPADPAEVKPGAGPRH 195 (346)
T ss_pred cccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec--CCceEEEEEcccCccccccccccCCCCCcce
Confidence 432 1 111 11111 11 0111112457999999986554 34567777777533211 12222233344
Q ss_pred EeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEE-----eecC--CCceEEEEeeeC--CEEEEEEEeC
Q 004866 266 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESV-----FIDD--QGLVVEDVDFCK--THMALILREG 336 (726)
Q Consensus 266 ~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v-----~~~~--~~~~l~~~~~~~--~~lv~~~~~~ 336 (726)
..+-|+++..|+++.-.. ...++.++-. .++++++ +|.+ .......+.+.. ++||+.- .
T Consensus 196 i~FHpn~k~aY~v~EL~s------tV~v~~y~~~----~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasN--R 263 (346)
T COG2706 196 IVFHPNGKYAYLVNELNS------TVDVLEYNPA----VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASN--R 263 (346)
T ss_pred EEEcCCCcEEEEEeccCC------EEEEEEEcCC----CceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEec--C
Confidence 455566776676665442 1233333321 1222221 1221 122334455554 4555444 4
Q ss_pred CeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEe
Q 004866 337 RTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQ 415 (726)
Q Consensus 337 g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~ 415 (726)
|...|..+.++...++ ..+....+..-..|. +++++..++.++..-....+ -.+|+.|.++|++.++..
T Consensus 264 g~dsI~~f~V~~~~g~--L~~~~~~~teg~~PR-------~F~i~~~g~~Liaa~q~sd~-i~vf~~d~~TG~L~~~~~ 332 (346)
T COG2706 264 GHDSIAVFSVDPDGGK--LELVGITPTEGQFPR-------DFNINPSGRFLIAANQKSDN-ITVFERDKETGRLTLLGR 332 (346)
T ss_pred CCCeEEEEEEcCCCCE--EEEEEEeccCCcCCc-------cceeCCCCCEEEEEccCCCc-EEEEEEcCCCceEEeccc
Confidence 4445555444322111 111000000111222 34456666666555544444 688999999999887654
No 184
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.97 E-value=0.00016 Score=72.90 Aligned_cols=101 Identities=25% Similarity=0.336 Sum_probs=67.6
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHH-CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHc--C
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK--E 568 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~--~ 568 (726)
.+.|.++.+||-.|+. ..|......|+. -|--|+.+|.|-+|.+-.. .. ....++...+..+++. +
T Consensus 50 ~~~Pp~i~lHGl~GS~--~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~-----~~----h~~~~ma~dv~~Fi~~v~~ 118 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSK--ENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKI-----TV----HNYEAMAEDVKLFIDGVGG 118 (315)
T ss_pred CCCCceEEecccccCC--CCHHHHHHHhcccccCceEEEecccCCCCccc-----cc----cCHHHHHHHHHHHHHHccc
Confidence 4678999999977754 567777777776 4889999999999975322 11 1234444444444432 1
Q ss_pred CCCCCcEEEEEecccH-HHHHHHHHcCCCceeEEEE
Q 004866 569 IVKEHKLAGWGYSAGG-LLVAAAINCCPDLFRAVVL 603 (726)
Q Consensus 569 ~~d~~ri~i~G~S~GG-~l~~~~~~~~p~~f~a~v~ 603 (726)
..--.++.|.|||||| -++++.+...|++..-+|.
T Consensus 119 ~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv 154 (315)
T KOG2382|consen 119 STRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIV 154 (315)
T ss_pred ccccCCceecccCcchHHHHHHHHHhcCcccceeEE
Confidence 1234689999999999 6666666667887655553
No 185
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=97.97 E-value=0.0026 Score=67.62 Aligned_cols=199 Identities=15% Similarity=0.173 Sum_probs=103.5
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCC-Cceeccc--c-------------ccccceeEEecCCCEEEEEEecCCC
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-GALCSKP--Q-------------AVRVSNIAWAKDGQALIYVVTDQNK 190 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t-g~~~~~~--~-------------~~~~~~~~WspDg~~l~y~~~~~~~ 190 (726)
+.++|||++|..+ +..++ .+.+++++. |...... . ......+.++|||+.+|....
T Consensus 92 i~~~~~g~~l~va-ny~~g---~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dl---- 163 (345)
T PF10282_consen 92 IAVDPDGRFLYVA-NYGGG---SVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDL---- 163 (345)
T ss_dssp EEECTTSSEEEEE-ETTTT---EEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEET----
T ss_pred EEEecCCCEEEEE-EccCC---eEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEec----
Confidence 4689999998665 55444 377788776 4433221 0 112346899999999977632
Q ss_pred CCceEEEEEcCCCC-c--e--eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEE---eecc--
Q 004866 191 RPYQIYCSIIGSTD-E--D--ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL---IWEC-- 260 (726)
Q Consensus 191 ~~~~l~~~~l~t~~-~--~--~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~---l~~~-- 260 (726)
....|+.+++.... . . .+.......+ -.+.++|||+++++.......-.++.++..+ +.++. +...
T Consensus 164 G~D~v~~~~~~~~~~~l~~~~~~~~~~G~GP--Rh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~--g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 164 GADRVYVYDIDDDTGKLTPVDSIKVPPGSGP--RHLAFSPDGKYAYVVNELSNTVSVFDYDPSD--GSLTEIQTISTLPE 239 (345)
T ss_dssp TTTEEEEEEE-TTS-TEEEEEEEECSTTSSE--EEEEE-TTSSEEEEEETTTTEEEEEEEETTT--TEEEEEEEEESCET
T ss_pred CCCEEEEEEEeCCCceEEEeeccccccCCCC--cEEEEcCCcCEEEEecCCCCcEEEEeecccC--CceeEEEEeeeccc
Confidence 23478888886543 1 1 1111111222 2467899999998876544433444444223 33322 2111
Q ss_pred -C----CceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceE--EeecCCCceEEEEee--eCCEEEE
Q 004866 261 -E----GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWES--VFIDDQGLVVEDVDF--CKTHMAL 331 (726)
Q Consensus 261 -~----~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--v~~~~~~~~l~~~~~--~~~~lv~ 331 (726)
. ......+++||+.||+ +|+..+ ...++.++.. .+..+. .++- .+....++.+ .+++|++
T Consensus 240 ~~~~~~~~~~i~ispdg~~lyv-snr~~~-----sI~vf~~d~~----~g~l~~~~~~~~-~G~~Pr~~~~s~~g~~l~V 308 (345)
T PF10282_consen 240 GFTGENAPAEIAISPDGRFLYV-SNRGSN-----SISVFDLDPA----TGTLTLVQTVPT-GGKFPRHFAFSPDGRYLYV 308 (345)
T ss_dssp TSCSSSSEEEEEE-TTSSEEEE-EECTTT-----EEEEEEECTT----TTTEEEEEEEEE-SSSSEEEEEE-TTSSEEEE
T ss_pred cccccCCceeEEEecCCCEEEE-EeccCC-----EEEEEEEecC----CCceEEEEEEeC-CCCCccEEEEeCCCCEEEE
Confidence 1 1233457788887666 565432 2334444322 223332 2222 1223455555 5677777
Q ss_pred EEEeCCeeEEEEEecCC
Q 004866 332 ILREGRTYRLCSVSLPL 348 (726)
Q Consensus 332 ~~~~~g~~~l~~~~l~~ 348 (726)
.-...+.-.++.+|.++
T Consensus 309 a~~~s~~v~vf~~d~~t 325 (345)
T PF10282_consen 309 ANQDSNTVSVFDIDPDT 325 (345)
T ss_dssp EETTTTEEEEEEEETTT
T ss_pred EecCCCeEEEEEEeCCC
Confidence 66666665666666544
No 186
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.97 E-value=0.02 Score=61.17 Aligned_cols=155 Identities=14% Similarity=0.125 Sum_probs=88.8
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
...+||||+++ |+.+++| .|.++|+.+++.+.... .....+++.|+||++++.+... +..+..+|..+.+
T Consensus 41 ~~~~s~Dgr~~-yv~~rdg----~vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v~n~~----~~~v~v~D~~tle 111 (369)
T PF02239_consen 41 GLKFSPDGRYL-YVANRDG----TVSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYVANYE----PGTVSVIDAETLE 111 (369)
T ss_dssp EEE-TT-SSEE-EEEETTS----EEEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEEEEEE----TTEEEEEETTT--
T ss_pred EEEecCCCCEE-EEEcCCC----eEEEEECCcccEEEEEecCCCcceEEEcCCCCEEEEEecC----CCceeEecccccc
Confidence 34689999986 5556655 48999999998775433 3345679999999999877543 3478888877664
Q ss_pred ceeEEe-eec----CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeccCCceEEeeeecCCEEEEE
Q 004866 205 EDALLL-EES----NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECEGLAHCIVEHHEGFLYLF 278 (726)
Q Consensus 205 ~~~lv~-~~~----d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~-~~l~~~~~~~~~~~~~~g~~l~~~ 278 (726)
.-..+. ... ...-...+.-++++...+++..+ ..++|++|..+..... +.+..........+++++++|+..
T Consensus 112 ~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd--~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va 189 (369)
T PF02239_consen 112 PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD--TGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVA 189 (369)
T ss_dssp EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT--TTEEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEE
T ss_pred ceeecccccccccccCCCceeEEecCCCCEEEEEEcc--CCeEEEEEeccccccceeeecccccccccccCcccceeeec
Confidence 211121 111 01122456668888876666554 4589999987742111 222222223345678888888776
Q ss_pred ecCcccCCCCCCeEEEEeeCC
Q 004866 279 TDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 279 t~~~~~~~~~~~~~l~~~~~~ 299 (726)
.+... ++..+|..
T Consensus 190 ~~~sn--------~i~viD~~ 202 (369)
T PF02239_consen 190 ANGSN--------KIAVIDTK 202 (369)
T ss_dssp EGGGT--------EEEEEETT
T ss_pred ccccc--------eeEEEeec
Confidence 55432 46666654
No 187
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=97.94 E-value=0.0012 Score=69.32 Aligned_cols=193 Identities=14% Similarity=0.118 Sum_probs=107.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-----ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
.+...++||||+++|-+. .+| .++++|=.+|+.+-... .+.+..++||||++.|+-...|. .+.+
T Consensus 192 FV~~VRysPDG~~Fat~g-sDg----ki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk-----t~KI 261 (603)
T KOG0318|consen 192 FVNCVRYSPDGSRFATAG-SDG----KIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK-----TIKI 261 (603)
T ss_pred ceeeEEECCCCCeEEEec-CCc----cEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc-----eEEE
Confidence 366789999999987663 233 48999999998765322 34677899999999998775443 2444
Q ss_pred EEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-EeeeecCCEE
Q 004866 198 SIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFL 275 (726)
Q Consensus 198 ~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l 275 (726)
+|+.+.. ...++....-+.-.+++-|.+ + .|+-.+..+ .|-+++.+.+. .++.+........ ..+++++++|
T Consensus 262 WdVs~~slv~t~~~~~~v~dqqvG~lWqk-d-~lItVSl~G---~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i 335 (603)
T KOG0318|consen 262 WDVSTNSLVSTWPMGSTVEDQQVGCLWQK-D-HLITVSLSG---TINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTI 335 (603)
T ss_pred EEeeccceEEEeecCCchhceEEEEEEeC-C-eEEEEEcCc---EEEEecccCCC-hhheecccccceeEEEEcCCCCEE
Confidence 5665554 333343333222346777872 2 333333322 35566666643 3334433333322 3456777555
Q ss_pred EEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeC-CEEEEEEEeCCeeEEEEEecC
Q 004866 276 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 276 ~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 347 (726)
|-- ..+ ..|...+.. . +.-..+........|..+...+ +.++...-++ .|+++++.
T Consensus 336 ~Sg-syD--------G~I~~W~~~-~---g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd---~l~~~~~~ 392 (603)
T KOG0318|consen 336 YSG-SYD--------GHINSWDSG-S---GTSDRLAGKGHTNQIKGMAASESGELFTIGWDD---TLRVISLK 392 (603)
T ss_pred Eee-ccC--------ceEEEEecC-C---ccccccccccccceEEEEeecCCCcEEEEecCC---eEEEEecc
Confidence 433 333 236666654 2 1112233333345566777666 5555554444 35555553
No 188
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=97.94 E-value=0.0091 Score=62.53 Aligned_cols=116 Identities=13% Similarity=0.011 Sum_probs=72.6
Q ss_pred CCCEEEEEEeCCC-CcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEe-----cCCCCCceEEEEEcCCCC-
Q 004866 132 DHKFLAYTMYDKD-NDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVT-----DQNKRPYQIYCSIIGSTD- 204 (726)
Q Consensus 132 DG~~la~~~~~~g-~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~-----~~~~~~~~l~~~~l~t~~- 204 (726)
|+++ +|+.|..- .-..+|+|+|.++++.+.....+.......||||+.||.... ....+...|-.+|+.+.+
T Consensus 11 ~~~~-v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~ 89 (352)
T TIGR02658 11 DARR-VYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNPVVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLP 89 (352)
T ss_pred CCCE-EEEECCcccccCceEEEEECCCCEEEEEEEccCCCceeECCCCCEEEEEeccccccccCCCCCEEEEEECccCcE
Confidence 5665 67766541 001469999999998775433333333359999999988754 112234578888988876
Q ss_pred ceeEEeeecCCc-----eEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 205 EDALLLEESNEN-----VYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 205 ~~~lv~~~~d~~-----~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
...+... +++. +-..+.+|||||+|++.. ....+.+-++|++++
T Consensus 90 ~~~i~~p-~~p~~~~~~~~~~~~ls~dgk~l~V~n-~~p~~~V~VvD~~~~ 138 (352)
T TIGR02658 90 IADIELP-EGPRFLVGTYPWMTSLTPDNKTLLFYQ-FSPSPAVGVVDLEGK 138 (352)
T ss_pred EeEEccC-CCchhhccCccceEEECCCCCEEEEec-CCCCCEEEEEECCCC
Confidence 3333322 2211 112467899999997643 333567889999873
No 189
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.90 E-value=0.00058 Score=72.61 Aligned_cols=87 Identities=20% Similarity=0.121 Sum_probs=60.5
Q ss_pred hHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 513 RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 513 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
....+.|++ |+-|++.|++--+. .....+.-.++|++..+...++. +.++ +-++|.|+||.++++++.
T Consensus 120 RS~V~~Ll~-g~dVYl~DW~~p~~--------vp~~~~~f~ldDYi~~l~~~i~~--~G~~-v~l~GvCqgG~~~laa~A 187 (406)
T TIGR01849 120 RSTVEALLP-DHDVYITDWVNARM--------VPLSAGKFDLEDYIDYLIEFIRF--LGPD-IHVIAVCQPAVPVLAAVA 187 (406)
T ss_pred HHHHHHHhC-CCcEEEEeCCCCCC--------CchhcCCCCHHHHHHHHHHHHHH--hCCC-CcEEEEchhhHHHHHHHH
Confidence 455688888 99999999764331 11123345778888665555533 3445 999999999999776654
Q ss_pred cC-----CCceeEEEEeCCccccc
Q 004866 593 CC-----PDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 593 ~~-----p~~f~a~v~~~p~~d~~ 611 (726)
.. |...+.+++..+.+|..
T Consensus 188 l~a~~~~p~~~~sltlm~~PID~~ 211 (406)
T TIGR01849 188 LMAENEPPAQPRSMTLMGGPIDAR 211 (406)
T ss_pred HHHhcCCCCCcceEEEEecCccCC
Confidence 43 66789999888877754
No 190
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=97.90 E-value=0.00018 Score=70.98 Aligned_cols=140 Identities=11% Similarity=0.096 Sum_probs=89.3
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCc
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 205 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~ 205 (726)
..+||+|++||-.+ ++.|.|+|.+|-+..++.. .+.+..+.|+.|+-.|.-..+.+ ..|...++..++-
T Consensus 14 c~fSp~g~yiAs~~------~yrlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~----~~vqvwsl~Qpew 83 (447)
T KOG4497|consen 14 CSFSPCGNYIASLS------RYRLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKD----PKVQVWSLVQPEW 83 (447)
T ss_pred eeECCCCCeeeeee------eeEEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeecc----ceEEEEEeeccee
Confidence 36999999999875 3679999999887777644 66788899999998888775533 2566667655431
Q ss_pred eeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEEecCc
Q 004866 206 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLFTDAA 282 (726)
Q Consensus 206 ~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~~ 282 (726)
--.+-+..++ .....|||||+.|+..+.-.. +|-++.+.+..+ ..+.-.. ....+.+.+||+...+.+.++
T Consensus 84 ~ckIdeg~ag--ls~~~WSPdgrhiL~tseF~l--riTVWSL~t~~~--~~~~~pK~~~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 84 YCKIDEGQAG--LSSISWSPDGRHILLTSEFDL--RITVWSLNTQKG--YLLPHPKTNVKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred EEEeccCCCc--ceeeeECCCcceEeeeeccee--EEEEEEecccee--EEecccccCceeEEECCCCceeeeeeccc
Confidence 1112222222 245789999999987765443 344444433211 1222222 223466778888877777654
No 191
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=97.90 E-value=0.0014 Score=65.93 Aligned_cols=104 Identities=11% Similarity=0.079 Sum_probs=71.1
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEE-E
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY-C 197 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~-~ 197 (726)
..-+...+|.+||..++-++ . |+ ..|.|||+++|..+++.. .+.++-+.|||||..||-++.|.. ..|| .
T Consensus 195 h~pVtsmqwn~dgt~l~tAS-~-gs--ssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~dav---frlw~e 267 (445)
T KOG2139|consen 195 HNPVTSMQWNEDGTILVTAS-F-GS--SSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAV---FRLWQE 267 (445)
T ss_pred CceeeEEEEcCCCCEEeecc-c-Cc--ceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccce---eeeehh
Confidence 45677889999999987654 2 32 469999999998887753 457788999999999988866532 2344 2
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcC
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFS 236 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~ 236 (726)
+..-+. .+-+.. ........|||+|++|+|....
T Consensus 268 ~q~wt~--erw~lg---sgrvqtacWspcGsfLLf~~sg 301 (445)
T KOG2139|consen 268 NQSWTK--ERWILG---SGRVQTACWSPCGSFLLFACSG 301 (445)
T ss_pred ccccee--cceecc---CCceeeeeecCCCCEEEEEEcC
Confidence 222221 122211 1133456799999999998764
No 192
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.88 E-value=0.00033 Score=72.29 Aligned_cols=201 Identities=12% Similarity=0.092 Sum_probs=118.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+-.|.+|||+++||+.- ..| .|+++...|++.+.... .+.+..+.|+.||+.|+.+. ...+||.++++
T Consensus 305 ~~e~FeVShd~~fia~~G-~~G----~I~lLhakT~eli~s~KieG~v~~~~fsSdsk~l~~~~-----~~GeV~v~nl~ 374 (514)
T KOG2055|consen 305 SMERFEVSHDSNFIAIAG-NNG----HIHLLHAKTKELITSFKIEGVVSDFTFSSDSKELLASG-----GTGEVYVWNLR 374 (514)
T ss_pred hhheeEecCCCCeEEEcc-cCc----eEEeehhhhhhhhheeeeccEEeeEEEecCCcEEEEEc-----CCceEEEEecC
Confidence 455678999999998863 333 59999999998765333 66889999999999887763 23489999998
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC----ceEEeeeecCCEEEE
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG----LAHCIVEHHEGFLYL 277 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~----~~~~~~~~~g~~l~~ 277 (726)
.... .-.+...+.-.-..++.|++|.|++..+.++- -.||-.+-.-..+.++++..-.. -....++||...|.+
T Consensus 375 ~~~~-~~rf~D~G~v~gts~~~S~ng~ylA~GS~~Gi-VNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAi 452 (514)
T KOG2055|consen 375 QNSC-LHRFVDDGSVHGTSLCISLNGSYLATGSDSGI-VNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAI 452 (514)
T ss_pred Ccce-EEEEeecCccceeeeeecCCCceEEeccCcce-EEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhh
Confidence 7631 11232333333356788999999887665441 23333222111234455443221 123456788888888
Q ss_pred EecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeC-CEEEEEEEeCCeeEEEEE
Q 004866 278 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSV 344 (726)
Q Consensus 278 ~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~ 344 (726)
.++...+ ..+|+-++-- ..-.+|-+. ..+-..+..++... ...+.+.++.|...|+.+
T Consensus 453 aS~~~kn-----alrLVHvPS~--TVFsNfP~~--n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 453 ASRVKKN-----ALRLVHVPSC--TVFSNFPTS--NTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKL 511 (514)
T ss_pred hhhcccc-----ceEEEeccce--eeeccCCCC--CCcccceEEEEecCCCceEEeecCCCceeeEee
Confidence 8876432 3677766532 112334211 11111223333332 445556677787777654
No 193
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=97.84 E-value=0.00033 Score=71.24 Aligned_cols=112 Identities=21% Similarity=0.211 Sum_probs=66.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccc---cccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA---VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~---~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+..+.||||.++|.-- +-+| .+.++|+.||+.+..... ....+.+|.|||.+++....| ..++..+
T Consensus 271 ~V~yi~wSPDdryLlaC---g~~e--~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d-----r~i~~wd 340 (519)
T KOG0293|consen 271 PVSYIMWSPDDRYLLAC---GFDE--VLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD-----RTIIMWD 340 (519)
T ss_pred ceEEEEECCCCCeEEec---CchH--heeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC-----CcEEEec
Confidence 56778999999997532 1222 389999999987765432 345778999999997655333 2566666
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
++..... -.+....+-..+++.++||++++.... ..++.+++.++
T Consensus 341 lDgn~~~--~W~gvr~~~v~dlait~Dgk~vl~v~~---d~~i~l~~~e~ 385 (519)
T KOG0293|consen 341 LDGNILG--NWEGVRDPKVHDLAITYDGKYVLLVTV---DKKIRLYNREA 385 (519)
T ss_pred CCcchhh--cccccccceeEEEEEcCCCcEEEEEec---ccceeeechhh
Confidence 6543210 001111122335666777777765542 23455555544
No 194
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=97.82 E-value=0.015 Score=61.39 Aligned_cols=148 Identities=11% Similarity=0.089 Sum_probs=85.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc----cccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
.+.-.++||.|-|+|-. |..| .++|||....+.+... ..+.+..++|+.|+++|+..-. ...+...++..
T Consensus 61 ~vtVAkySPsG~yiASG-D~sG----~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGE-Grerfg~~F~~ 134 (603)
T KOG0318|consen 61 QVTVAKYSPSGFYIASG-DVSG----KVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGE-GRERFGHVFLW 134 (603)
T ss_pred eeEEEEeCCCceEEeec-CCcC----cEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEec-CccceeEEEEe
Confidence 45556899999988765 5566 4999998764443321 1457788999999999988732 22233344444
Q ss_pred EcCC-----------------------------CCceeEEeeecC----------CceEEEEEEcCCCcEEEEEEcCCCc
Q 004866 199 IIGS-----------------------------TDEDALLLEESN----------ENVYVNIRHTKDFHFVCVHTFSTTS 239 (726)
Q Consensus 199 ~l~t-----------------------------~~~~~lv~~~~d----------~~~~~~~~~s~Dg~~l~~~~~~~~~ 239 (726)
|-|+ ....+..|+.+. ..|.-.+.+||||+.++-... .
T Consensus 135 DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs---D 211 (603)
T KOG0318|consen 135 DSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS---D 211 (603)
T ss_pred cCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC---C
Confidence 4332 111122333221 122235789999998654333 3
Q ss_pred eEEEEEeCCCCCCCeEEeeccC--CceEE--eeeecCCEEEEEec
Q 004866 240 SKVFLINAADPFSGLTLIWECE--GLAHC--IVEHHEGFLYLFTD 280 (726)
Q Consensus 240 ~~l~~~d~~~~~~~~~~l~~~~--~~~~~--~~~~~g~~l~~~t~ 280 (726)
..++++|-.+++ .+..+.... .+..| .|+||+.+|+-.+.
T Consensus 212 gki~iyDGktge-~vg~l~~~~aHkGsIfalsWsPDs~~~~T~Sa 255 (603)
T KOG0318|consen 212 GKIYIYDGKTGE-KVGELEDSDAHKGSIFALSWSPDSTQFLTVSA 255 (603)
T ss_pred ccEEEEcCCCcc-EEEEecCCCCccccEEEEEECCCCceEEEecC
Confidence 479999988743 222232111 12222 45677777665543
No 195
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=97.81 E-value=3.7e-05 Score=87.42 Aligned_cols=132 Identities=18% Similarity=0.158 Sum_probs=85.9
Q ss_pred ECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCC-CCccch--HHHHHHHHCCcEEEEEccCCCCCCCCcccccccc
Q 004866 471 PSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGEL-LDKRWR--SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRR 547 (726)
Q Consensus 471 ~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~-~~~~~~--~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~ 547 (726)
.+.|... ..|+.|......+ .|++|++|||.-.. ....|. .....+..+..+|+.++||-+- +| |...+..
T Consensus 92 ~sEDCLy--lNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~-lG--F~st~d~ 165 (545)
T KOG1516|consen 92 GSEDCLY--LNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGP-LG--FLSTGDS 165 (545)
T ss_pred CcCCCce--EEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEeccccee-ce--eeecCCC
Confidence 3556544 4467776543223 89999999973321 112232 2223455568999999999642 22 2212211
Q ss_pred c-CCCCcHHHHHHHHHHHHHc--CC-CCCCcEEEEEecccHHHHHHHHHc--CCCceeEEEEeCCcc
Q 004866 548 T-KKLNSIKDFISCARFLIEK--EI-VKEHKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPFL 608 (726)
Q Consensus 548 ~-~~~~~~~D~~~~~~~l~~~--~~-~d~~ri~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~ 608 (726)
. .+...+.|.+.|++|+.++ .+ -||++|.|+|+|+||..+..++.. ...+|+.+|..++..
T Consensus 166 ~~~gN~gl~Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 166 AAPGNLGLFDQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 1 3445678999999999875 11 399999999999999998877753 125899999887754
No 196
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=97.81 E-value=0.018 Score=61.51 Aligned_cols=255 Identities=13% Similarity=0.017 Sum_probs=119.8
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccc---------cccceeEEecCCCEEEEEEecCCCCCceE
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA---------VRVSNIAWAKDGQALIYVVTDQNKRPYQI 195 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~---------~~~~~~~WspDg~~l~y~~~~~~~~~~~l 195 (726)
.++++||||++|+.+....+ ++.|+|.+|.+.+..... .+...+.-+|++..++++..+ ..+|
T Consensus 81 ~~i~~s~DG~~~~v~n~~~~----~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd----~~~I 152 (369)
T PF02239_consen 81 RGIAVSPDGKYVYVANYEPG----TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD----TGEI 152 (369)
T ss_dssp EEEEE--TTTEEEEEEEETT----EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT----TTEE
T ss_pred ceEEEcCCCCEEEEEecCCC----ceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc----CCeE
Confidence 45689999999977644444 589999999887753221 134566778888877776543 3489
Q ss_pred EEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeecc-CCc---eEEeeeec
Q 004866 196 YCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGL---AHCIVEHH 271 (726)
Q Consensus 196 ~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-~~~---~~~~~~~~ 271 (726)
|..|......-.... ..-..+.-+..|+|||+|++...+. .+.+-++|+++ .+...+... ... ....+-|.
T Consensus 153 ~vVdy~d~~~~~~~~-i~~g~~~~D~~~dpdgry~~va~~~--sn~i~viD~~~--~k~v~~i~~g~~p~~~~~~~~php 227 (369)
T PF02239_consen 153 WVVDYSDPKNLKVTT-IKVGRFPHDGGFDPDGRYFLVAANG--SNKIAVIDTKT--GKLVALIDTGKKPHPGPGANFPHP 227 (369)
T ss_dssp EEEETTTSSCEEEEE-EE--TTEEEEEE-TTSSEEEEEEGG--GTEEEEEETTT--TEEEEEEE-SSSBEETTEEEEEET
T ss_pred EEEEeccccccceee-ecccccccccccCcccceeeecccc--cceeEEEeecc--ceEEEEeeccccccccccccccCC
Confidence 999976653221111 1223344567899999999876554 34788888876 333222221 111 11222233
Q ss_pred CCEEEEEecCcccCCCCCCeEEEEeeCCCC-CCCCCceEE--eecCCCceEEEEeeeCCEEEEEE-EeCCeeEEEEEecC
Q 004866 272 EGFLYLFTDAAKEGQEADNHYLLRCPVDAS-FPSRTWESV--FIDDQGLVVEDVDFCKTHMALIL-REGRTYRLCSVSLP 347 (726)
Q Consensus 272 g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~v--~~~~~~~~l~~~~~~~~~lv~~~-~~~g~~~l~~~~l~ 347 (726)
+.-.++.+...+.. ..-++-.+.. . -....|+.+ ++.......-..++..+++++-. .......|.++|..
T Consensus 228 ~~g~vw~~~~~~~~----~~~~ig~~~v-~v~d~~~wkvv~~I~~~G~glFi~thP~s~~vwvd~~~~~~~~~v~viD~~ 302 (369)
T PF02239_consen 228 GFGPVWATSGLGYF----AIPLIGTDPV-SVHDDYAWKVVKTIPTQGGGLFIKTHPDSRYVWVDTFLNPDADTVQVIDKK 302 (369)
T ss_dssp TTEEEEEEEBSSSS----EEEEEE--TT-T-STTTBTSEEEEEE-SSSS--EE--TT-SEEEEE-TT-SSHT-EEEEECC
T ss_pred CcceEEeeccccce----ecccccCCcc-ccchhhcCeEEEEEECCCCcceeecCCCCccEEeeccCCCCCceEEEEECc
Confidence 33333333322211 0112222221 1 123456533 11111111223344556766652 12235578888865
Q ss_pred CCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEE
Q 004866 348 LPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWN 411 (726)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~ 411 (726)
+.+ .+ ..+........+ ...++.+++.+.++.- ..-.+|..||.++.+..
T Consensus 303 tl~-----~~-----~~i~~~~~~~~~--h~ef~~dG~~v~vS~~--~~~~~i~v~D~~Tl~~~ 352 (369)
T PF02239_consen 303 TLK-----VV-----KTITPGPGKRVV--HMEFNPDGKEVWVSVW--DGNGAIVVYDAKTLKEK 352 (369)
T ss_dssp GTE-----EE-----E-HHHHHT--EE--EEEE-TTSSEEEEEEE----TTEEEEEETTTTEEE
T ss_pred Ccc-----ee-----EEEeccCCCcEe--ccEECCCCCEEEEEEe--cCCCEEEEEECCCcEEE
Confidence 321 01 112111110011 2235678888766443 33349999998887643
No 197
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=97.80 E-value=0.0017 Score=61.95 Aligned_cols=147 Identities=15% Similarity=0.168 Sum_probs=90.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeEEecCCCEEEEEEecCCC--------
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNK-------- 190 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~-------- 190 (726)
++..+.++||++.||... +..|+++|+.++..-++.. ..++..+.|--||++.|-...|..-
T Consensus 42 qVNrLeiTpdk~~LAaa~------~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~ 115 (311)
T KOG0315|consen 42 QVNRLEITPDKKDLAAAG------NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL 115 (311)
T ss_pred ceeeEEEcCCcchhhhcc------CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc
Confidence 677788999999998763 2469999999998755432 2467888999999988654322210
Q ss_pred ----------------------------CCceEEEEEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceE
Q 004866 191 ----------------------------RPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSK 241 (726)
Q Consensus 191 ----------------------------~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~ 241 (726)
+...|+.+|++... ...++- |.+ .+..++...|||++|+-..+.+ .
T Consensus 116 ~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liP-e~~-~~i~sl~v~~dgsml~a~nnkG---~ 190 (311)
T KOG0315|consen 116 SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIP-EDD-TSIQSLTVMPDGSMLAAANNKG---N 190 (311)
T ss_pred ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCC-CCC-cceeeEEEcCCCcEEEEecCCc---c
Confidence 12346667776654 333332 222 3344678899999986544433 3
Q ss_pred EEEEeCCCC--CCCeEEeeccCCc----eEEeeeecCCEEEEEec
Q 004866 242 VFLINAADP--FSGLTLIWECEGL----AHCIVEHHEGFLYLFTD 280 (726)
Q Consensus 242 l~~~d~~~~--~~~~~~l~~~~~~----~~~~~~~~g~~l~~~t~ 280 (726)
.|++++-+. ..++.++.+-... ...-++||+++|.-.+.
T Consensus 191 cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ss 235 (311)
T KOG0315|consen 191 CYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSS 235 (311)
T ss_pred EEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecC
Confidence 555555332 2334555443322 23456788887765544
No 198
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=97.80 E-value=0.0097 Score=57.98 Aligned_cols=195 Identities=13% Similarity=0.062 Sum_probs=108.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.++....|+||++ |++.+.++ .+++||+++|+..+... ...+-.+++++|++.|.--..| ..|.++++
T Consensus 65 ~v~dv~~s~dg~~-alS~swD~----~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrD-----kTiklwnt 134 (315)
T KOG0279|consen 65 FVSDVVLSSDGNF-ALSASWDG----TLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRD-----KTIKLWNT 134 (315)
T ss_pred EecceEEccCCce-EEeccccc----eEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCc-----ceeeeeee
Confidence 5788899999997 45544444 59999999998766433 3356789999999988654333 24555555
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCc-EEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCce--EEeeeecCCEEEE
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFH-FVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA--HCIVEHHEGFLYL 277 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~--~~~~~~~g~~l~~ 277 (726)
-+... ..+.++....+..-+.|+|... -++++..-+ .-+-++|+.+- +.+.......+. ...++|||.....
T Consensus 135 ~g~ck-~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~D--ktvKvWnl~~~--~l~~~~~gh~~~v~t~~vSpDGslcas 209 (315)
T KOG0279|consen 135 LGVCK-YTIHEDSHREWVSCVRFSPNESNPIIVSASWD--KTVKVWNLRNC--QLRTTFIGHSGYVNTVTVSPDGSLCAS 209 (315)
T ss_pred cccEE-EEEecCCCcCcEEEEEEcCCCCCcEEEEccCC--ceEEEEccCCc--chhhccccccccEEEEEECCCCCEEec
Confidence 33221 1122221122333478999963 333333322 34566677662 222222222221 2356788875443
Q ss_pred EecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCC
Q 004866 278 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLP 349 (726)
Q Consensus 278 ~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 349 (726)
++ ....++..|++ . ... +..-+....+..+....+++.+....+. .|.++|++++
T Consensus 210 ----Gg-----kdg~~~LwdL~-~--~k~---lysl~a~~~v~sl~fspnrywL~~at~~--sIkIwdl~~~ 264 (315)
T KOG0279|consen 210 ----GG-----KDGEAMLWDLN-E--GKN---LYSLEAFDIVNSLCFSPNRYWLCAATAT--SIKIWDLESK 264 (315)
T ss_pred ----CC-----CCceEEEEEcc-C--Cce---eEeccCCCeEeeEEecCCceeEeeccCC--ceEEEeccch
Confidence 11 13457777776 2 122 2222233445666666666666554433 3777887654
No 199
>PTZ00420 coronin; Provisional
Probab=97.79 E-value=0.0027 Score=70.95 Aligned_cols=148 Identities=10% Similarity=0.073 Sum_probs=88.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc-cccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+..++|+|++..++.+...+| .|.|||+.+++..... ....+..++|+|||+.|+.+..+ ..|.++|+.
T Consensus 127 ~V~sVaf~P~g~~iLaSgS~Dg----tIrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D-----~~IrIwD~R 197 (568)
T PTZ00420 127 KISIIDWNPMNYYIMCSSGFDS----FVNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVG-----KHMHIIDPR 197 (568)
T ss_pred cEEEEEECCCCCeEEEEEeCCC----eEEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecC-----CEEEEEECC
Confidence 4677899999998766654444 5999999998754322 23456789999999977655322 368888987
Q ss_pred CCCceeEEeeecCCceEE----EEEEcCCCcEEEEEEcCCC-ceEEEEEeCCCCCCCeEEeeccC--CceEEeeeecCCE
Q 004866 202 STDEDALLLEESNENVYV----NIRHTKDFHFVCVHTFSTT-SSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGF 274 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~----~~~~s~Dg~~l~~~~~~~~-~~~l~~~d~~~~~~~~~~l~~~~--~~~~~~~~~~g~~ 274 (726)
++.. ...+......... -..+++|+++|+....++. ...|.++|+......+..+.-.. ......++++.+.
T Consensus 198 sg~~-i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~ 276 (568)
T PTZ00420 198 KQEI-ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGL 276 (568)
T ss_pred CCcE-EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCC
Confidence 7642 1122222111111 1235689998877665543 36799999885333333222111 1223344555555
Q ss_pred EEEEec
Q 004866 275 LYLFTD 280 (726)
Q Consensus 275 l~~~t~ 280 (726)
+|+...
T Consensus 277 l~lsGk 282 (568)
T PTZ00420 277 IYLIGK 282 (568)
T ss_pred EEEEEE
Confidence 655543
No 200
>PRK04940 hypothetical protein; Provisional
Probab=97.79 E-value=0.00077 Score=62.84 Aligned_cols=119 Identities=13% Similarity=0.012 Sum_probs=69.9
Q ss_pred CcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCccccccc
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQK 652 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~ 652 (726)
++++|+|.|+|||.+.+++.++. . .+|+..|.+.....+.. .+.... .|. ..+++..+.++ +..
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g--~-~aVLiNPAv~P~~~L~~-~ig~~~-~y~----~~~~~h~~eL~-------~~~ 123 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG--I-RQVIFNPNLFPEENMEG-KIDRPE-EYA----DIATKCVTNFR-------EKN 123 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC--C-CEEEECCCCChHHHHHH-HhCCCc-chh----hhhHHHHHHhh-------hcC
Confidence 46999999999999999999864 2 45677888776432211 000000 011 11223333333 111
Q ss_pred CCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHH
Q 004866 653 DVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLI 721 (726)
Q Consensus 653 ~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~ 721 (726)
.--.+++....|....+.++.+.++.. -.+.+++|+.|.+..-++. ...+++|+.
T Consensus 124 --p~r~~vllq~gDEvLDyr~a~~~y~~~---------y~~~v~~GGdH~f~~fe~~---l~~I~~F~~ 178 (180)
T PRK04940 124 --RDRCLVILSRNDEVLDSQRTAEELHPY---------YEIVWDEEQTHKFKNISPH---LQRIKAFKT 178 (180)
T ss_pred --cccEEEEEeCCCcccCHHHHHHHhccC---------ceEEEECCCCCCCCCHHHH---HHHHHHHHh
Confidence 112478888889999888777665322 0234478999988663333 344567764
No 201
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.78 E-value=0.0013 Score=62.28 Aligned_cols=174 Identities=13% Similarity=0.097 Sum_probs=103.9
Q ss_pred CccEEEEEcCCCCCCCCccchHH----HHHHHHCCcEEEEEccCC------CC--CCC-------------Cccccccc-
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSE----LKSLLDRGWVVAFADVRG------GG--GGG-------------KKWHHDGR- 546 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~----~~~l~~~G~~v~~~d~RG------~g--~~g-------------~~~~~~~~- 546 (726)
+.|-||++||--. .+..|+.- ...|.+. +-.+.+|-+- .. +.+ ..|.....
T Consensus 4 ~k~rvLcLHGfrQ--sg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~ 80 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQ--SGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEA 80 (230)
T ss_pred CCceEEEecchhh--ccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhccccc
Confidence 3577999998533 33455432 2333334 6666666541 10 110 23443333
Q ss_pred ccCCCCcHHH-HHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcC--CC------ceeEEEEeCCcccccccccCC
Q 004866 547 RTKKLNSIKD-FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC--PD------LFRAVVLEVPFLDATNTLLYP 617 (726)
Q Consensus 547 ~~~~~~~~~D-~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~--p~------~f~a~v~~~p~~d~~~~~~~~ 617 (726)
.......++. +....+|+.++|--| ||.|.|.|+.|++.+++.. .. -|+-+|..+|+.-..
T Consensus 81 ~~~~~~~~eesl~yl~~~i~enGPFD----GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~------ 150 (230)
T KOG2551|consen 81 SFTEYFGFEESLEYLEDYIKENGPFD----GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPS------ 150 (230)
T ss_pred ccccccChHHHHHHHHHHHHHhCCCc----cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCc------
Confidence 2222334555 445567788888887 9999999999999988721 10 256666666653211
Q ss_pred CCCCChhhhcccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEc
Q 004866 618 ILPLIAADYEEFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNL 697 (726)
Q Consensus 618 ~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 697 (726)
.+.+ +.. +.. .+++|.|-|.|..|..||...+..+++....+ +++.-
T Consensus 151 -------------~~~~----~~~-------~~~-~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--------~vl~H 197 (230)
T KOG2551|consen 151 -------------KKLD----ESA-------YKR-PLSTPSLHIFGETDTIVPSERSEQLAESFKDA--------TVLEH 197 (230)
T ss_pred -------------chhh----hhh-------hcc-CCCCCeeEEecccceeecchHHHHHHHhcCCC--------eEEec
Confidence 0110 000 012 37899999999999999999999999988764 23356
Q ss_pred CCCCCCCchhhHHHH
Q 004866 698 TTDIVEENRYLQCKE 712 (726)
Q Consensus 698 ~~gH~~~~~~~~~~~ 712 (726)
.+||.........+.
T Consensus 198 pggH~VP~~~~~~~~ 212 (230)
T KOG2551|consen 198 PGGHIVPNKAKYKEK 212 (230)
T ss_pred CCCccCCCchHHHHH
Confidence 789986553333333
No 202
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.75 E-value=0.033 Score=56.16 Aligned_cols=112 Identities=17% Similarity=0.126 Sum_probs=72.8
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+..+.|+|||++|+.... +| .++++++.+++...... ......+.|+|+++.|+.... ...|+++++
T Consensus 11 ~i~~~~~~~~~~~l~~~~~-~g----~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----~~~i~i~~~ 80 (289)
T cd00200 11 GVTCVAFSPDGKLLATGSG-DG----TIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS-----DKTIRLWDL 80 (289)
T ss_pred CEEEEEEcCCCCEEEEeec-Cc----EEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC-----CCeEEEEEc
Confidence 4667789999999988753 33 58999998886433222 224458899999987776643 347888888
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+++.. ..+..... ....+.|+++++.++... ....++++|+.+
T Consensus 81 ~~~~~~-~~~~~~~~-~i~~~~~~~~~~~~~~~~---~~~~i~~~~~~~ 124 (289)
T cd00200 81 ETGECV-RTLTGHTS-YVSSVAFSPDGRILSSSS---RDKTIKVWDVET 124 (289)
T ss_pred Ccccce-EEEeccCC-cEEEEEEcCCCCEEEEec---CCCeEEEEECCC
Confidence 765321 12222221 234578899987766544 234688888875
No 203
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.70 E-value=0.00025 Score=71.20 Aligned_cols=101 Identities=28% Similarity=0.307 Sum_probs=66.7
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHHHC--CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLLDR--GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 571 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~--G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 571 (726)
.|.|+++||.++.. ..|......+... -|.|+.+|.||+|.+. . . ........+.+..+.++-..
T Consensus 21 ~~~i~~~hg~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~---~------~~~~~~~~~~~~~~~~~~~~- 87 (282)
T COG0596 21 GPPLVLLHGFPGSS--SVWRPVFKVLPALAARYRVIAPDLRGHGRSD-P---A------GYSLSAYADDLAALLDALGL- 87 (282)
T ss_pred CCeEEEeCCCCCch--hhhHHHHHHhhccccceEEEEecccCCCCCC-c---c------cccHHHHHHHHHHHHHHhCC-
Confidence 35899999987644 2333322222221 1999999999988764 0 0 11222223344444432222
Q ss_pred CCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 572 EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 572 ~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
.++.+.|+|+||.++..++.++|++++++|+..+..
T Consensus 88 -~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~ 123 (282)
T COG0596 88 -EKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAP 123 (282)
T ss_pred -CceEEEEecccHHHHHHHHHhcchhhheeeEecCCC
Confidence 349999999999999999999999999999888654
No 204
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.68 E-value=0.037 Score=56.80 Aligned_cols=241 Identities=12% Similarity=0.107 Sum_probs=121.6
Q ss_pred eeceeeCCCCCEEEEEEe-----CCCCcEEEEEEEECCCCceecccc-c--------cccceeEEecCCCEEEEEEecCC
Q 004866 124 EELSEVSPDHKFLAYTMY-----DKDNDYFTLSVRNLNSGALCSKPQ-A--------VRVSNIAWAKDGQALIYVVTDQN 189 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~-----~~g~e~~~l~v~dl~tg~~~~~~~-~--------~~~~~~~WspDg~~l~y~~~~~~ 189 (726)
++.+.+||||+.+..... ..|...--|-++|..|=.+..... . .....+..|+|||++|+...-.
T Consensus 38 ~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TP- 116 (342)
T PF06433_consen 38 LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTP- 116 (342)
T ss_dssp SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESS-
T ss_pred CCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCC-
Confidence 345679999999875432 234444568899998865443211 1 1224578999999998764432
Q ss_pred CCCceEEEEEcCCCC-ce-------eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC
Q 004866 190 KRPYQIYCSIIGSTD-ED-------ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE 261 (726)
Q Consensus 190 ~~~~~l~~~~l~t~~-~~-------~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 261 (726)
...|=++|+...+ .. .++|...+..|+ ....||+.+.+.....+....- ...+....
T Consensus 117 --a~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~---~lC~DGsl~~v~Ld~~Gk~~~~----------~t~~F~~~ 181 (342)
T PF06433_consen 117 --ATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFS---MLCGDGSLLTVTLDADGKEAQK----------STKVFDPD 181 (342)
T ss_dssp --SEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEE---EEETTSCEEEEEETSTSSEEEE----------EEEESSTT
T ss_pred --CCeEEEEECCCCceeeeecCCCEEEEEecCCCceE---EEecCCceEEEEECCCCCEeEe----------eccccCCC
Confidence 2357777876553 11 112322222332 3456676666555433321100 01111111
Q ss_pred Cc---eEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCC---------------CCCceEEeecCCCceEEEEe
Q 004866 262 GL---AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP---------------SRTWESVFIDDQGLVVEDVD 323 (726)
Q Consensus 262 ~~---~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~---------------~~~~~~v~~~~~~~~l~~~~ 323 (726)
.+ ..+.....++.+||.|-.+ .|+.+++. ... ...|+ |. +..+-.++
T Consensus 182 ~dp~f~~~~~~~~~~~~~F~Sy~G---------~v~~~dls-g~~~~~~~~~~~~t~~e~~~~Wr---PG--G~Q~~A~~ 246 (342)
T PF06433_consen 182 DDPLFEHPAYSRDGGRLYFVSYEG---------NVYSADLS-GDSAKFGKPWSLLTDAEKADGWR---PG--GWQLIAYH 246 (342)
T ss_dssp TS-B-S--EEETTTTEEEEEBTTS---------EEEEEEET-TSSEEEEEEEESS-HHHHHTTEE---E---SSS-EEEE
T ss_pred CcccccccceECCCCeEEEEecCC---------EEEEEecc-CCcccccCcccccCccccccCcC---Cc--ceeeeeec
Confidence 11 1122234567888876532 36666654 111 12333 11 22333444
Q ss_pred eeCCEEEEEEEe-------CCeeEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCC
Q 004866 324 FCKTHMALILRE-------GRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVM 396 (726)
Q Consensus 324 ~~~~~lv~~~~~-------~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~ 396 (726)
...++||+.... ++..+|+++|+.+++ ++ ..++++..+.+|.. +.+..=++|..+. .
T Consensus 247 ~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~k-----rv-----~Ri~l~~~~~Si~V----sqd~~P~L~~~~~--~ 310 (342)
T PF06433_consen 247 AASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHK-----RV-----ARIPLEHPIDSIAV----SQDDKPLLYALSA--G 310 (342)
T ss_dssp TTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTE-----EE-----EEEEEEEEESEEEE----ESSSS-EEEEEET--T
T ss_pred cccCeEEEEecCCCCCCccCCceEEEEEECCCCe-----EE-----EEEeCCCccceEEE----ccCCCcEEEEEcC--C
Confidence 456788887643 234689999987643 22 23555444434432 2344445555544 2
Q ss_pred CceEEEEECCCCeEE
Q 004866 397 PDAVVDYDLSYGKWN 411 (726)
Q Consensus 397 P~~~~~~d~~~~~~~ 411 (726)
-..++.+|..+|+..
T Consensus 311 ~~~l~v~D~~tGk~~ 325 (342)
T PF06433_consen 311 DGTLDVYDAATGKLV 325 (342)
T ss_dssp TTEEEEEETTT--EE
T ss_pred CCeEEEEeCcCCcEE
Confidence 258999999998754
No 205
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=97.66 E-value=0.011 Score=58.59 Aligned_cols=215 Identities=13% Similarity=0.090 Sum_probs=110.5
Q ss_pred eecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCcee-----ccc-cccccceeEEecCCCEEE
Q 004866 109 LDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC-----SKP-QAVRVSNIAWAKDGQALI 182 (726)
Q Consensus 109 ld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~-----~~~-~~~~~~~~~WspDg~~l~ 182 (726)
|+.+.|. +|++ .++.+.||.||++||-..+. + .|.+|++..-+.. +.. ..+....+.|+||-+.++
T Consensus 77 l~~~~LK-gH~~--~vt~~~FsSdGK~lat~~~D-r----~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~v 148 (420)
T KOG2096|consen 77 LNVSVLK-GHKK--EVTDVAFSSDGKKLATISGD-R----SIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVV 148 (420)
T ss_pred hhhhhhh-ccCC--ceeeeEEcCCCceeEEEeCC-c----eEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEE
Confidence 3555554 3332 67888999999999987642 2 4889998763211 111 123446689999999998
Q ss_pred EEEecCCCCCceEEEEEcCCCC----------ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCC
Q 004866 183 YVVTDQNKRPYQIYCSIIGSTD----------EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFS 252 (726)
Q Consensus 183 y~~~~~~~~~~~l~~~~l~t~~----------~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~ 252 (726)
+... +...||.+.+.... .|-+-|++...--.+++.....+++|.-.+. .+.|.++++.+ .
T Consensus 149 v~~~----~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~---dt~i~lw~lkG--q 219 (420)
T KOG2096|consen 149 VSVK----RGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASL---DTKICLWDLKG--Q 219 (420)
T ss_pred EEEc----cCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecC---CCcEEEEecCC--c
Confidence 8754 33467666553211 1111122221112234555666666643222 35688888875 2
Q ss_pred CeEEeeccC-CceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeec-CCCceEEEEeeeC-CEE
Q 004866 253 GLTLIWECE-GLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFID-DQGLVVEDVDFCK-THM 329 (726)
Q Consensus 253 ~~~~l~~~~-~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~-~~~~~l~~~~~~~-~~l 329 (726)
.+..+.... ......++|+|+.+....-.+ +.+++..=...+.+-.....++.- .....+-.+...+ ..-
T Consensus 220 ~L~~idtnq~~n~~aavSP~GRFia~~gFTp-------DVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r 292 (420)
T KOG2096|consen 220 LLQSIDTNQSSNYDAAVSPDGRFIAVSGFTP-------DVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTR 292 (420)
T ss_pred eeeeeccccccccceeeCCCCcEEEEecCCC-------CceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcce
Confidence 233332222 234456788887655433222 244544433211111111111111 1112222222222 455
Q ss_pred EEEEEeCCeeEEEEEecC
Q 004866 330 ALILREGRTYRLCSVSLP 347 (726)
Q Consensus 330 v~~~~~~g~~~l~~~~l~ 347 (726)
.++.+.+|.-+|+-.|+.
T Consensus 293 ~vtvSkDG~wriwdtdVr 310 (420)
T KOG2096|consen 293 AVTVSKDGKWRIWDTDVR 310 (420)
T ss_pred eEEEecCCcEEEeeccce
Confidence 667788898888777664
No 206
>PTZ00421 coronin; Provisional
Probab=97.66 E-value=0.018 Score=63.92 Aligned_cols=114 Identities=10% Similarity=0.094 Sum_probs=72.8
Q ss_pred EeeceeeCC-CCCEEEEEEeCCCCcEEEEEEEECCCCcee-------c-ccc-ccccceeEEecCCCEEEEEEecCCCCC
Q 004866 123 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALC-------S-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRP 192 (726)
Q Consensus 123 ~~~~~~~SP-DG~~la~~~~~~g~e~~~l~v~dl~tg~~~-------~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~ 192 (726)
.+..++||| |+++||-+. .+| .|.+||+.++... . +.. ...+..+.|+|++..++.+... .
T Consensus 77 ~V~~v~fsP~d~~~LaSgS-~Dg----tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~----D 147 (493)
T PTZ00421 77 PIIDVAFNPFDPQKLFTAS-EDG----TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGA----D 147 (493)
T ss_pred CEEEEEEcCCCCCEEEEEe-CCC----EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeC----C
Confidence 567789999 888887664 334 5999999875321 1 111 2356778999997655555432 2
Q ss_pred ceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 193 YQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 193 ~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
..|.++|+.++.. ...+.... .....+.|+|||+.|+..+. ...|.++|+.++
T Consensus 148 gtVrIWDl~tg~~-~~~l~~h~-~~V~sla~spdG~lLatgs~---Dg~IrIwD~rsg 200 (493)
T PTZ00421 148 MVVNVWDVERGKA-VEVIKCHS-DQITSLEWNLDGSLLCTTSK---DKKLNIIDPRDG 200 (493)
T ss_pred CEEEEEECCCCeE-EEEEcCCC-CceEEEEEECCCCEEEEecC---CCEEEEEECCCC
Confidence 3688889887642 22222222 22346889999998775544 346888898774
No 207
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.65 E-value=0.066 Score=53.89 Aligned_cols=195 Identities=11% Similarity=-0.004 Sum_probs=109.2
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEe-cCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWA-KDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~Ws-pDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
++.|.++...|.|+ |..+. .|+.+++++++........ ..++... +| ..|+++.. ..+.+.++.+++
T Consensus 4 gp~~d~~~g~l~~~-D~~~~---~i~~~~~~~~~~~~~~~~~-~~G~~~~~~~-g~l~v~~~------~~~~~~d~~~g~ 71 (246)
T PF08450_consen 4 GPVWDPRDGRLYWV-DIPGG---RIYRVDPDTGEVEVIDLPG-PNGMAFDRPD-GRLYVADS------GGIAVVDPDTGK 71 (246)
T ss_dssp EEEEETTTTEEEEE-ETTTT---EEEEEETTTTEEEEEESSS-EEEEEEECTT-SEEEEEET------TCEEEEETTTTE
T ss_pred ceEEECCCCEEEEE-EcCCC---EEEEEECCCCeEEEEecCC-CceEEEEccC-CEEEEEEc------CceEEEecCCCc
Confidence 46788867777565 65554 5999999998765433333 4556666 66 55766632 134555887765
Q ss_pred ceeEEeeecC--C-ceEEEEEEcCCCcEEEEEEcCCC----c--eEEEEEeCCCCCCCeEEeeccCC-ceEEeeeecCCE
Q 004866 205 EDALLLEESN--E-NVYVNIRHTKDFHFVCVHTFSTT----S--SKVFLINAADPFSGLTLIWECEG-LAHCIVEHHEGF 274 (726)
Q Consensus 205 ~~~lv~~~~d--~-~~~~~~~~s~Dg~~l~~~~~~~~----~--~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~~~g~~ 274 (726)
...+.-...+ . ...-++.+.+||+ |+++..... . ..||.++... +.+.+..... .....++++++.
T Consensus 72 ~~~~~~~~~~~~~~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~~---~~~~~~~~~~~pNGi~~s~dg~~ 147 (246)
T PF08450_consen 72 VTVLADLPDGGVPFNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPDG---KVTVVADGLGFPNGIAFSPDGKT 147 (246)
T ss_dssp EEEEEEEETTCSCTEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETTS---EEEEEEEEESSEEEEEEETTSSE
T ss_pred EEEEeeccCCCcccCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCCC---eEEEEecCcccccceEECCcchh
Confidence 3333222112 1 2234688999999 666654332 1 5799999872 3334433322 223457889998
Q ss_pred EEEEecCcccCCCCCCeEEEEeeCCCCCCC--CCceEEeecCCC-ceEEEEeeeC-CEEEEEEEeCCeeEEEEEecC
Q 004866 275 LYLFTDAAKEGQEADNHYLLRCPVDASFPS--RTWESVFIDDQG-LVVEDVDFCK-THMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 275 l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~v~~~~~~-~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 347 (726)
||+.... +.+|++++++ .... ...+.++..... ....++.+.. +.|++... +..+|.+++.+
T Consensus 148 lyv~ds~--------~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~--~~~~I~~~~p~ 213 (246)
T PF08450_consen 148 LYVADSF--------NGRIWRFDLD-ADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADW--GGGRIVVFDPD 213 (246)
T ss_dssp EEEEETT--------TTEEEEEEEE-TTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEE--TTTEEEEEETT
T ss_pred eeecccc--------cceeEEEecc-ccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEc--CCCEEEEECCC
Confidence 8875432 2458888875 2221 111222222222 2477888875 56666655 33477788865
No 208
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.64 E-value=0.00022 Score=78.55 Aligned_cols=114 Identities=20% Similarity=0.190 Sum_probs=69.9
Q ss_pred ccEEEEEcCCCCCCCCccc--hHHHHHHHH-CCcEEEEEccCCCCCCCCccccccc----ccCCCCcHHHHHHHHHHHHH
Q 004866 494 NPGLLHGHGAYGELLDKRW--RSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGR----RTKKLNSIKDFISCARFLIE 566 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~--~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~----~~~~~~~~~D~~~~~~~l~~ 566 (726)
.|++|++-|. +. ....+ ...+..||+ .|-.|++...|-.|++-. +..... ...-...++|+..-++++..
T Consensus 29 gpifl~~ggE-~~-~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P-~~~~s~~nL~yLt~~QALaD~a~F~~~~~~ 105 (434)
T PF05577_consen 29 GPIFLYIGGE-GP-IEPFWINNGFMWELAKEFGALVVALEHRYYGKSQP-FGDLSTENLRYLTSEQALADLAYFIRYVKK 105 (434)
T ss_dssp SEEEEEE--S-S--HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-T-TGGGGGSTTTC-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-Cc-cchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCC-ccccchhhHHhcCHHHHHHHHHHHHHHHHH
Confidence 7999998553 21 11111 123455666 599999999998776421 111111 11223467888888888875
Q ss_pred cC-CCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccc
Q 004866 567 KE-IVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDA 610 (726)
Q Consensus 567 ~~-~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~ 610 (726)
+- ..+..++.++|+||||.|++++-..+|++|.++++.++++..
T Consensus 106 ~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 106 KYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp HTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred hhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 43 335569999999999999999999999999999999887654
No 209
>PTZ00420 coronin; Provisional
Probab=97.61 E-value=0.034 Score=62.31 Aligned_cols=113 Identities=9% Similarity=0.055 Sum_probs=72.7
Q ss_pred EeeceeeCCC-CCEEEEEEeCCCCcEEEEEEEECCCCce-ec--------ccc-ccccceeEEecCCCEEEEEEecCCCC
Q 004866 123 YEELSEVSPD-HKFLAYTMYDKDNDYFTLSVRNLNSGAL-CS--------KPQ-AVRVSNIAWAKDGQALIYVVTDQNKR 191 (726)
Q Consensus 123 ~~~~~~~SPD-G~~la~~~~~~g~e~~~l~v~dl~tg~~-~~--------~~~-~~~~~~~~WspDg~~l~y~~~~~~~~ 191 (726)
.+..++|||+ ++.||-+. .+| .|+|||+.++.. .. +.. ...+..++|+|++..++.+...+
T Consensus 76 ~V~~lafsP~~~~lLASgS-~Dg----tIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~D--- 147 (568)
T PTZ00420 76 SILDLQFNPCFSEILASGS-EDL----TIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFD--- 147 (568)
T ss_pred CEEEEEEcCCCCCEEEEEe-CCC----eEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCC---
Confidence 5677899997 66665543 344 599999986532 10 111 23567899999999887664322
Q ss_pred CceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 192 PYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 192 ~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
..|.++|+.+++.. ..+... .....+.|++||+.|+..+. ...|.++|+.++
T Consensus 148 -gtIrIWDl~tg~~~-~~i~~~--~~V~SlswspdG~lLat~s~---D~~IrIwD~Rsg 199 (568)
T PTZ00420 148 -SFVNIWDIENEKRA-FQINMP--KKLSSLKWNIKGNLLSGTCV---GKHMHIIDPRKQ 199 (568)
T ss_pred -CeEEEEECCCCcEE-EEEecC--CcEEEEEECCCCCEEEEEec---CCEEEEEECCCC
Confidence 36888898876521 122212 22346889999998865543 246888898874
No 210
>PTZ00421 coronin; Provisional
Probab=97.57 E-value=0.0089 Score=66.26 Aligned_cols=147 Identities=10% Similarity=0.079 Sum_probs=85.8
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+..++|+|++..+..+...++ .|.|||+.+++...... ...+..++|+|||+.|+....| ..|.++|+
T Consensus 127 ~V~~l~f~P~~~~iLaSgs~Dg----tVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~D-----g~IrIwD~ 197 (493)
T PTZ00421 127 KVGIVSFHPSAMNVLASAGADM----VVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKD-----KKLNIIDP 197 (493)
T ss_pred cEEEEEeCcCCCCEEEEEeCCC----EEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCC-----CEEEEEEC
Confidence 4667889999754444433333 59999999987654322 3456789999999977665332 36888898
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcC-CCceEEEEEeCCCCCCCeEEeeccC-Cce-EEeeeecCCEEEE
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFS-TTSSKVFLINAADPFSGLTLIWECE-GLA-HCIVEHHEGFLYL 277 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~-~~~~~l~~~d~~~~~~~~~~l~~~~-~~~-~~~~~~~g~~l~~ 277 (726)
.+++. ...+..........+.|++++..|+....+ .....|.++|+.+.......+.... ... ...++++++.||.
T Consensus 198 rsg~~-v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~l 276 (493)
T PTZ00421 198 RDGTI-VSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYI 276 (493)
T ss_pred CCCcE-EEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEE
Confidence 77642 111111111122346788888877654433 2346789999876432222221111 111 2345667776665
Q ss_pred Ee
Q 004866 278 FT 279 (726)
Q Consensus 278 ~t 279 (726)
.+
T Consensus 277 gg 278 (493)
T PTZ00421 277 GS 278 (493)
T ss_pred EE
Confidence 54
No 211
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=97.54 E-value=0.0053 Score=56.20 Aligned_cols=110 Identities=14% Similarity=0.078 Sum_probs=78.5
Q ss_pred cCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChhhhc
Q 004866 548 TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAADYE 627 (726)
Q Consensus 548 ~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~ 627 (726)
+|-....+|.++.+..-+..- ++.+.+++||.|+.+++..+.+....++++++.+|.- +.+.
T Consensus 37 ~w~~P~~~dWi~~l~~~v~a~---~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd-~~~~-------------- 98 (181)
T COG3545 37 DWEAPVLDDWIARLEKEVNAA---EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPD-VSRP-------------- 98 (181)
T ss_pred CCCCCCHHHHHHHHHHHHhcc---CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCC-cccc--------------
Confidence 344568899999888776542 4569999999999999999987666788888887742 2210
Q ss_pred ccCCCCChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhc
Q 004866 628 EFGYPGDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRES 684 (726)
Q Consensus 628 ~~g~~~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~ 684 (726)
.. ....+..++|+...+ ...|.+++....|+.|++++++.+++++-.+
T Consensus 99 -----~~--~~~~~~tf~~~p~~~--lpfps~vvaSrnDp~~~~~~a~~~a~~wgs~ 146 (181)
T COG3545 99 -----EI--RPKHLMTFDPIPREP--LPFPSVVVASRNDPYVSYEHAEDLANAWGSA 146 (181)
T ss_pred -----cc--chhhccccCCCcccc--CCCceeEEEecCCCCCCHHHHHHHHHhccHh
Confidence 00 011233445554333 4778899999999999999999999888653
No 212
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.54 E-value=0.0004 Score=70.00 Aligned_cols=94 Identities=16% Similarity=0.265 Sum_probs=62.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
-+..+.|||||++||-.+- +. .+.+||-.+|+.+.... ...+..++||.|+|-|+-.+.|. .|-.+++
T Consensus 369 lVn~V~fSPd~r~IASaSF-Dk----SVkLW~g~tGk~lasfRGHv~~VYqvawsaDsRLlVS~SkDs-----TLKvw~V 438 (480)
T KOG0271|consen 369 LVNHVSFSPDGRYIASASF-DK----SVKLWDGRTGKFLASFRGHVAAVYQVAWSADSRLLVSGSKDS-----TLKVWDV 438 (480)
T ss_pred heeeEEECCCccEEEEeec-cc----ceeeeeCCCcchhhhhhhccceeEEEEeccCccEEEEcCCCc-----eEEEEEe
Confidence 4566789999999998753 33 38999999998776433 34667899999998665443333 3444455
Q ss_pred CCCCceeEEeeec---CCceEEEEEEcCCCcEEE
Q 004866 201 GSTDEDALLLEES---NENVYVNIRHTKDFHFVC 231 (726)
Q Consensus 201 ~t~~~~~lv~~~~---d~~~~~~~~~s~Dg~~l~ 231 (726)
.+.+ +.++-+ |+-| .+.|||||+.++
T Consensus 439 ~tkK---l~~DLpGh~DEVf--~vDwspDG~rV~ 467 (480)
T KOG0271|consen 439 RTKK---LKQDLPGHADEVF--AVDWSPDGQRVA 467 (480)
T ss_pred eeee---ecccCCCCCceEE--EEEecCCCceee
Confidence 4432 222222 3333 468999999875
No 213
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=97.50 E-value=0.0026 Score=65.15 Aligned_cols=111 Identities=15% Similarity=0.122 Sum_probs=70.4
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
..++.++|.|+|++|+-++- + .+..+||+.|+..+.... ...+.+++|-+||.-+.-...|.. .+| +|
T Consensus 262 ~RVs~VafHPsG~~L~Tasf-D----~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~---~Rv--WD 331 (459)
T KOG0272|consen 262 ARVSRVAFHPSGKFLGTASF-D----STWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSL---GRV--WD 331 (459)
T ss_pred hhheeeeecCCCceeeeccc-c----cchhhcccccchhhHhhcccccccceeEecCCCceeeccCccch---hhe--ee
Confidence 46888999999999987643 2 347899999997665433 346789999999975443333322 234 46
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI 245 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 245 (726)
+.++. -+++++..-.. ..++.|||+|-.|+-. ..+.+..||-+
T Consensus 332 lRtgr-~im~L~gH~k~-I~~V~fsPNGy~lATg-s~Dnt~kVWDL 374 (459)
T KOG0272|consen 332 LRTGR-CIMFLAGHIKE-ILSVAFSPNGYHLATG-SSDNTCKVWDL 374 (459)
T ss_pred cccCc-EEEEecccccc-eeeEeECCCceEEeec-CCCCcEEEeee
Confidence 66663 34444432222 3578999999877633 33334444433
No 214
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.45 E-value=0.0051 Score=65.62 Aligned_cols=103 Identities=22% Similarity=0.266 Sum_probs=66.3
Q ss_pred CCccEEEE----EcCCCCCCCCccc--hHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHH
Q 004866 492 NQNPGLLH----GHGAYGELLDKRW--RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLI 565 (726)
Q Consensus 492 ~~~P~vl~----~hGg~~~~~~~~~--~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~ 565 (726)
.+.|.||. +|| +|.. .| ..++-.-+..|.-|..+-+.-..+-| .+++|+..+....+
T Consensus 67 ~krP~vViDPRAGHG-pGIG---GFK~dSevG~AL~~GHPvYFV~F~p~P~pg-------------QTl~DV~~ae~~Fv 129 (581)
T PF11339_consen 67 TKRPFVVIDPRAGHG-PGIG---GFKPDSEVGVALRAGHPVYFVGFFPEPEPG-------------QTLEDVMRAEAAFV 129 (581)
T ss_pred CCCCeEEeCCCCCCC-CCcc---CCCcccHHHHHHHcCCCeEEEEecCCCCCC-------------CcHHHHHHHHHHHH
Confidence 45787774 465 2221 23 23344445569988888876544322 47888877655444
Q ss_pred Hc---CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEE-EeCCccccc
Q 004866 566 EK---EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVV-LEVPFLDAT 611 (726)
Q Consensus 566 ~~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v-~~~p~~d~~ 611 (726)
++ -.-+..|..++|.+.||.+++.+++.+|+++.-+| +.+|+.-|.
T Consensus 130 ~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 130 EEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPLSYWA 179 (581)
T ss_pred HHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCccccc
Confidence 42 11233499999999999999999999999886554 456654443
No 215
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=97.44 E-value=0.0037 Score=63.28 Aligned_cols=71 Identities=15% Similarity=0.052 Sum_probs=50.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+-..+|||||++||-.+ | ..++++||+.|..+...-. ..-+..++|||||+.|+-... ...|.+++..
T Consensus 118 Vl~~~fsp~g~~l~tGs---G--D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~-----dg~I~lwdpk 187 (480)
T KOG0271|consen 118 VLSVQFSPTGSRLVTGS---G--DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK-----DGSIRLWDPK 187 (480)
T ss_pred EEEEEecCCCceEEecC---C--CceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc-----CCeEEEecCC
Confidence 44568999999987542 3 4689999999865543322 334677999999999976543 3468888876
Q ss_pred CCC
Q 004866 202 STD 204 (726)
Q Consensus 202 t~~ 204 (726)
+++
T Consensus 188 tg~ 190 (480)
T KOG0271|consen 188 TGQ 190 (480)
T ss_pred CCC
Confidence 665
No 216
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.42 E-value=0.018 Score=63.64 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=88.1
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEEC-CCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNL-NSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl-~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
...+..++|||||++|+=..+ ..+|+|||+ ..+..+.... ...+..+.|+|+|+.|+-...| ..|++
T Consensus 203 ~~~v~~~~fs~d~~~l~s~s~-----D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D-----~tvri 272 (456)
T KOG0266|consen 203 TRGVSDVAFSPDGSYLLSGSD-----DKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDD-----GTVRI 272 (456)
T ss_pred ccceeeeEECCCCcEEEEecC-----CceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCC-----CcEEE
Confidence 346788899999996655432 357999999 4445444322 3456889999999555444333 36888
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCC-eEEeeccCCc---eEEeeeecCC
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSG-LTLIWECEGL---AHCIVEHHEG 273 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~-~~~l~~~~~~---~~~~~~~~g~ 273 (726)
+++.+++....+ ..... ....+.+++||++|+..+. ...|.++|+.++... .+.+...... ....++++++
T Consensus 273 Wd~~~~~~~~~l-~~hs~-~is~~~f~~d~~~l~s~s~---d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~ 347 (456)
T KOG0266|consen 273 WDVRTGECVRKL-KGHSD-GISGLAFSPDGNLLVSASY---DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGK 347 (456)
T ss_pred EeccCCeEEEee-eccCC-ceEEEEECCCCCEEEEcCC---CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCc
Confidence 888886532222 22222 2345789999999876533 456888899874311 1233333323 2234557777
Q ss_pred EEEEEec
Q 004866 274 FLYLFTD 280 (726)
Q Consensus 274 ~l~~~t~ 280 (726)
.++..+.
T Consensus 348 ~ll~~~~ 354 (456)
T KOG0266|consen 348 YLLSASL 354 (456)
T ss_pred EEEEecC
Confidence 6665544
No 217
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.41 E-value=0.014 Score=64.36 Aligned_cols=196 Identities=12% Similarity=0.060 Sum_probs=117.3
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc-c-ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-Q-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~-~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
+..+..++.||||++||-..+ +| -+.|||..+|--.... . ...+..+.|+.+|+.++-...|.+ |..+
T Consensus 350 ~~~i~~l~YSpDgq~iaTG~e-Dg----KVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGt-----VRAw 419 (893)
T KOG0291|consen 350 SDRITSLAYSPDGQLIATGAE-DG----KVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGT-----VRAW 419 (893)
T ss_pred ccceeeEEECCCCcEEEeccC-CC----cEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCe-----EEee
Confidence 557788899999999988754 23 3999999988544322 2 346788999999998887766654 5555
Q ss_pred EcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEE-eeccCCceE-EeeeecCCEEE
Q 004866 199 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL-IWECEGLAH-CIVEHHEGFLY 276 (726)
Q Consensus 199 ~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~-l~~~~~~~~-~~~~~~g~~l~ 276 (726)
|+.... .--.|..+.+.-+.-++..|.|.-++ .......+|++++++++ +..- +...++.+. ..++++|+.|+
T Consensus 420 DlkRYr-NfRTft~P~p~QfscvavD~sGelV~--AG~~d~F~IfvWS~qTG--qllDiLsGHEgPVs~l~f~~~~~~La 494 (893)
T KOG0291|consen 420 DLKRYR-NFRTFTSPEPIQFSCVAVDPSGELVC--AGAQDSFEIFVWSVQTG--QLLDILSGHEGPVSGLSFSPDGSLLA 494 (893)
T ss_pred eecccc-eeeeecCCCceeeeEEEEcCCCCEEE--eeccceEEEEEEEeecC--eeeehhcCCCCcceeeEEccccCeEE
Confidence 554332 12244445555555567777787654 34445678999999994 4333 333344333 35678888777
Q ss_pred EEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEec
Q 004866 277 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSL 346 (726)
Q Consensus 277 ~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l 346 (726)
-.+... ..+++.+=-. .+..+++ ....++.-..+.+.++.|.+...+ | +|..+|.
T Consensus 495 S~SWDk-------TVRiW~if~s----~~~vEtl-~i~sdvl~vsfrPdG~elaVaTld-g--qItf~d~ 549 (893)
T KOG0291|consen 495 SGSWDK-------TVRIWDIFSS----SGTVETL-EIRSDVLAVSFRPDGKELAVATLD-G--QITFFDI 549 (893)
T ss_pred eccccc-------eEEEEEeecc----CceeeeE-eeccceeEEEEcCCCCeEEEEEec-c--eEEEEEh
Confidence 655432 2455544221 1222332 222334334566667777666543 3 3444443
No 218
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.37 E-value=0.018 Score=55.69 Aligned_cols=148 Identities=15% Similarity=0.110 Sum_probs=85.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCC-----------
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNK----------- 190 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~----------- 190 (726)
++..+.|+|-..-+.++.. |+ -.|.+||..+++.+..+. ........|+|||.++++...++.-
T Consensus 66 svdql~w~~~~~d~~atas--~d--k~ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~ 141 (313)
T KOG1407|consen 66 SVDQLCWDPKHPDLFATAS--GD--KTIRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIV 141 (313)
T ss_pred chhhheeCCCCCcceEEec--CC--ceEEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEeccccee
Confidence 5667788887777666543 32 258999999998887654 4455678999999999887544320
Q ss_pred ---------------CCceEEEEEcCCCCceeEEeeecCC--------ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeC
Q 004866 191 ---------------RPYQIYCSIIGSTDEDALLLEESNE--------NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINA 247 (726)
Q Consensus 191 ---------------~~~~l~~~~l~t~~~~~lv~~~~d~--------~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 247 (726)
..+.++...-|-+...++-|.+..+ .-.+-+.++|+|||+++.+.+ .-+-++|+
T Consensus 142 ~~~~~~~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsAD---AlvSLWD~ 218 (313)
T KOG1407|consen 142 NEEQFKFEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSAD---ALVSLWDV 218 (313)
T ss_pred ehhcccceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeecccc---ceeeccCh
Confidence 1123444444433333333322111 111236789999999876653 23556666
Q ss_pred CCCCCCeEEeeccCCc-eEEeeeecCCEEEEE
Q 004866 248 ADPFSGLTLIWECEGL-AHCIVEHHEGFLYLF 278 (726)
Q Consensus 248 ~~~~~~~~~l~~~~~~-~~~~~~~~g~~l~~~ 278 (726)
+.-- =.+.++.-+-. ....++++|+.|.-.
T Consensus 219 ~ELi-C~R~isRldwpVRTlSFS~dg~~lASa 249 (313)
T KOG1407|consen 219 DELI-CERCISRLDWPVRTLSFSHDGRMLASA 249 (313)
T ss_pred hHhh-hheeeccccCceEEEEeccCcceeecc
Confidence 4410 01233222222 234677888866543
No 219
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.35 E-value=0.0017 Score=66.07 Aligned_cols=111 Identities=19% Similarity=0.195 Sum_probs=75.9
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHH---HCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHH----HHHHHHH
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLL---DRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFIS----CARFLIE 566 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~---~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~----~~~~l~~ 566 (726)
.++|+++-|-||.. .-|......|. ...+.|+.....|+...... ..........+++|.++ .++.++.
T Consensus 2 ~~li~~IPGNPGlv--~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~--~~~~~~~~~~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGLV--EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSN--SKFSPNGRLFSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCChH--HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCccc--ccccCCCCccCHHHHHHHHHHHHHHHhh
Confidence 47899999999853 34445555555 34899999999998754333 00012234456666655 3344433
Q ss_pred cCCCCCCcEEEEEecccHHHHHHHHHcCC---CceeEEEEeCCcc
Q 004866 567 KEIVKEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPFL 608 (726)
Q Consensus 567 ~~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~ 608 (726)
+......++.++|||.|+|+++.++.+.+ ..++.+++..|.+
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 22114579999999999999999999998 6778888888865
No 220
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.26 Score=50.21 Aligned_cols=246 Identities=15% Similarity=0.119 Sum_probs=113.4
Q ss_pred EEEEEECC--CCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEe---eecCCceEEE
Q 004866 149 TLSVRNLN--SGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLL---EESNENVYVN 220 (726)
Q Consensus 149 ~l~v~dl~--tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~---~~~d~~~~~~ 220 (726)
.|++++++ +|+...... ..+...++|+|+++.||....+.....-..|.+|-.++.- .++- ....++ +.
T Consensus 17 gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~L-t~ln~~~~~g~~p--~y 93 (346)
T COG2706 17 GIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRL-TFLNRQTLPGSPP--CY 93 (346)
T ss_pred ceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeE-EEeeccccCCCCC--eE
Confidence 36666655 455433221 4466789999999999877554332233445555433321 1111 112233 34
Q ss_pred EEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCc----------eE-EeeeecCCEEEEEecCcccCCCCC
Q 004866 221 IRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL----------AH-CIVEHHEGFLYLFTDAAKEGQEAD 289 (726)
Q Consensus 221 ~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~----------~~-~~~~~~g~~l~~~t~~~~~~~~~~ 289 (726)
++.++||++|+......+.-.++-+..++.-..+..+....+. .. ..++|+++.|+. .+.+.+
T Consensus 94 vsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v-~DLG~D----- 167 (346)
T COG2706 94 VSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVV-PDLGTD----- 167 (346)
T ss_pred EEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEE-eecCCc-----
Confidence 6779999998876655543333333332211111111111111 12 235677765544 454432
Q ss_pred CeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccCCC
Q 004866 290 NHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPLPK 369 (726)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~ 369 (726)
...+++++.. ......-..+ .+..+-.=--+++.++.+|++.--++.-.++.++-..++ +..+.. ...+|+
T Consensus 168 ri~~y~~~dg-~L~~~~~~~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~------~~~lQ~-i~tlP~ 238 (346)
T COG2706 168 RIFLYDLDDG-KLTPADPAEV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGK------FEELQT-IDTLPE 238 (346)
T ss_pred eEEEEEcccC-cccccccccc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCce------EEEeee-eccCcc
Confidence 2445555411 1111111112 222111111345556677766655665556666543221 211111 112332
Q ss_pred ------ceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEEEEeec
Q 004866 370 ------YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNIIQQQN 417 (726)
Q Consensus 370 ------~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~~~~~~ 417 (726)
+...|. .+.|+..+ +.-.....-=.+|.+|..+++++.+....
T Consensus 239 dF~g~~~~aaIh----is~dGrFL-YasNRg~dsI~~f~V~~~~g~L~~~~~~~ 287 (346)
T COG2706 239 DFTGTNWAAAIH----ISPDGRFL-YASNRGHDSIAVFSVDPDGGKLELVGITP 287 (346)
T ss_pred ccCCCCceeEEE----ECCCCCEE-EEecCCCCeEEEEEEcCCCCEEEEEEEec
Confidence 222222 34555543 33333333446778888888887766544
No 221
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=97.23 E-value=0.017 Score=60.00 Aligned_cols=142 Identities=11% Similarity=0.071 Sum_probs=86.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccc-----cccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA-----VRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~-----~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
-+....|+|+|+..++++.++ --+|.+|+.+++...+... .....|.-|||++.|++.- ....|++
T Consensus 259 Pi~~a~f~p~G~~~i~~s~rr----ky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G-----~~G~I~l 329 (514)
T KOG2055|consen 259 PIQKAEFAPNGHSVIFTSGRR----KYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAG-----NNGHIHL 329 (514)
T ss_pred ccceeeecCCCceEEEecccc----eEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcc-----cCceEEe
Confidence 345567999999777765332 3489999999987765431 2456789999999887762 3345666
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC---ceEEeeeecCCE
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG---LAHCIVEHHEGF 274 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~---~~~~~~~~~g~~ 274 (726)
....|++ ++..-.-.....++.||.||+.|+++... .+||++|+... .........+ +....++.+|..
T Consensus 330 LhakT~e---li~s~KieG~v~~~~fsSdsk~l~~~~~~---GeV~v~nl~~~--~~~~rf~D~G~v~gts~~~S~ng~y 401 (514)
T KOG2055|consen 330 LHAKTKE---LITSFKIEGVVSDFTFSSDSKELLASGGT---GEVYVWNLRQN--SCLHRFVDDGSVHGTSLCISLNGSY 401 (514)
T ss_pred ehhhhhh---hhheeeeccEEeeEEEecCCcEEEEEcCC---ceEEEEecCCc--ceEEEEeecCccceeeeeecCCCce
Confidence 5555543 11111111223467899999988765543 38999999874 2222222222 223345567776
Q ss_pred EEEEecC
Q 004866 275 LYLFTDA 281 (726)
Q Consensus 275 l~~~t~~ 281 (726)
|+.-++.
T Consensus 402 lA~GS~~ 408 (514)
T KOG2055|consen 402 LATGSDS 408 (514)
T ss_pred EEeccCc
Confidence 6655553
No 222
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=97.22 E-value=0.2 Score=55.67 Aligned_cols=238 Identities=11% Similarity=0.041 Sum_probs=136.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+....|+--|.+||+....-| +|.||+..+...+.... ......++.||||+.|+-... ..+|.+++.
T Consensus 309 ~I~t~~~N~tGDWiA~g~~klg----QLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~e-----DgKVKvWn~ 379 (893)
T KOG0291|consen 309 KILTVSFNSTGDWIAFGCSKLG----QLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAE-----DGKVKVWNT 379 (893)
T ss_pred eeeEEEecccCCEEEEcCCccc----eEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccC-----CCcEEEEec
Confidence 3455678888999999876655 68888887765443322 346778999999997765432 246777787
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE--EeeeecCCEEEEE
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH--CIVEHHEGFLYLF 278 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~--~~~~~~g~~l~~~ 278 (726)
-++- =.++|.+.... ...+.|+.+|+.|+-.+-++ .+..+|+... ...+.++.+..-.. ..+++.|..+ +.
T Consensus 380 ~Sgf-C~vTFteHts~-Vt~v~f~~~g~~llssSLDG---tVRAwDlkRY-rNfRTft~P~p~QfscvavD~sGelV-~A 452 (893)
T KOG0291|consen 380 QSGF-CFVTFTEHTSG-VTAVQFTARGNVLLSSSLDG---TVRAWDLKRY-RNFRTFTSPEPIQFSCVAVDPSGELV-CA 452 (893)
T ss_pred cCce-EEEEeccCCCc-eEEEEEEecCCEEEEeecCC---eEEeeeeccc-ceeeeecCCCceeeeEEEEcCCCCEE-Ee
Confidence 6552 24466665544 35688999999887655544 3566676543 23455544333222 2344445543 33
Q ss_pred ecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEE--EeeeCCEEEEEEEeCCeeEEEEEecCCCCCCccee
Q 004866 279 TDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVED--VDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVH 356 (726)
Q Consensus 279 t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~--~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~ 356 (726)
...+ .|.|+.+++. .++..+++.+.++ .+.. +.+.++ +++..+-+-. +++++.=...
T Consensus 453 G~~d-------~F~IfvWS~q----TGqllDiLsGHEg-PVs~l~f~~~~~-~LaS~SWDkT--VRiW~if~s~------ 511 (893)
T KOG0291|consen 453 GAQD-------SFEIFVWSVQ----TGQLLDILSGHEG-PVSGLSFSPDGS-LLASGSWDKT--VRIWDIFSSS------ 511 (893)
T ss_pred eccc-------eEEEEEEEee----cCeeeehhcCCCC-cceeeEEccccC-eEEeccccce--EEEEEeeccC------
Confidence 3322 4778888776 3555566655433 3443 555555 4444444433 3444432110
Q ss_pred ecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCC
Q 004866 357 LKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYG 408 (726)
Q Consensus 357 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~ 408 (726)
....+++.+..+- +..+.+++..+.+.-. -++|-.+|.+.+
T Consensus 512 ---~~vEtl~i~sdvl----~vsfrPdG~elaVaTl----dgqItf~d~~~~ 552 (893)
T KOG0291|consen 512 ---GTVETLEIRSDVL----AVSFRPDGKELAVATL----DGQITFFDIKEA 552 (893)
T ss_pred ---ceeeeEeecccee----EEEEcCCCCeEEEEEe----cceEEEEEhhhc
Confidence 0123455554433 3446788888766432 246666776544
No 223
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.21 E-value=0.076 Score=53.46 Aligned_cols=112 Identities=15% Similarity=0.147 Sum_probs=72.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+..+.|+|+++.++... ..| .|+++|+.+++...... ......+.|+|+++.|+... ....|+++++
T Consensus 95 ~i~~~~~~~~~~~~~~~~-~~~----~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-----~~~~i~i~d~ 164 (289)
T cd00200 95 YVSSVAFSPDGRILSSSS-RDK----TIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSS-----QDGTIKLWDL 164 (289)
T ss_pred cEEEEEEcCCCCEEEEec-CCC----eEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEc-----CCCcEEEEEc
Confidence 456678999987766553 233 48999999776554322 33567899999977665542 1236888888
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+++... .+.... .....+.++|+++.|++... ...+.++|+..
T Consensus 165 ~~~~~~~-~~~~~~-~~i~~~~~~~~~~~l~~~~~---~~~i~i~d~~~ 208 (289)
T cd00200 165 RTGKCVA-TLTGHT-GEVNSVAFSPDGEKLLSSSS---DGTIKLWDLST 208 (289)
T ss_pred cccccce-eEecCc-cccceEEECCCcCEEEEecC---CCcEEEEECCC
Confidence 7554211 222222 12345789999998887765 34688888876
No 224
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.18 E-value=0.16 Score=52.50 Aligned_cols=249 Identities=13% Similarity=-0.009 Sum_probs=128.5
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCc
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 205 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~ 205 (726)
++.|-|+.+.|.|+ |..|+ .|+-+++++|+.........+.....-.++..|+-.. ..+++.++.++..
T Consensus 29 gP~w~~~~~~L~w~-DI~~~---~i~r~~~~~g~~~~~~~p~~~~~~~~~d~~g~Lv~~~-------~g~~~~~~~~~~~ 97 (307)
T COG3386 29 GPVWDPDRGALLWV-DILGG---RIHRLDPETGKKRVFPSPGGFSSGALIDAGGRLIACE-------HGVRLLDPDTGGK 97 (307)
T ss_pred CccCcCCCCEEEEE-eCCCC---eEEEecCCcCceEEEECCCCcccceeecCCCeEEEEc-------cccEEEeccCCce
Confidence 46799999999776 77775 4899999988765544445555666655555554442 1355555543332
Q ss_pred eeEEeeec-CC--ceEEEEEEcCCCcEEEEEEc-----CC---CceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCC
Q 004866 206 DALLLEES-NE--NVYVNIRHTKDFHFVCVHTF-----ST---TSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEG 273 (726)
Q Consensus 206 ~~lv~~~~-d~--~~~~~~~~s~Dg~~l~~~~~-----~~---~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~ 273 (726)
.+++.+.. +. ..+-+....|||++-+=... .. ....||+++..+ ...+.+...- -.-...++|||+
T Consensus 98 ~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g--~~~~l~~~~~~~~NGla~SpDg~ 175 (307)
T COG3386 98 ITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDG--GVVRLLDDDLTIPNGLAFSPDGK 175 (307)
T ss_pred eEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCC--CEEEeecCcEEecCceEECCCCC
Confidence 12222211 11 11224567888875433333 11 124699998744 3333333211 112346789999
Q ss_pred EEEEEecCcccCCCCCCeEEEEeeCCC-CCCC-CCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCC
Q 004866 274 FLYLFTDAAKEGQEADNHYLLRCPVDA-SFPS-RTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAG 351 (726)
Q Consensus 274 ~l~~~t~~~~~~~~~~~~~l~~~~~~~-~~~~-~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~ 351 (726)
.||+.-... .+|++++++. .... +.-..+..........++..+.+..+.+....+-..|.+++.+ +.
T Consensus 176 tly~aDT~~--------~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~- 245 (307)
T COG3386 176 TLYVADTPA--------NRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GK- 245 (307)
T ss_pred EEEEEeCCC--------CeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-Cc-
Confidence 888864432 4688887751 1111 1111122222334456677776554443444443577778765 21
Q ss_pred CcceeecccccccccCCC-ceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeE
Q 004866 352 KGVVHLKELHPHFLPLPK-YVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKW 410 (726)
Q Consensus 352 ~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~ 410 (726)
. ...+.+|. .......+ ..+.+++.++.+....+ ....-|...|.+
T Consensus 246 ----l-----~~~i~lP~~~~t~~~Fg---G~~~~~L~iTs~~~~~~-~~~~~~~~~G~l 292 (307)
T COG3386 246 ----L-----LGEIKLPVKRPTNPAFG---GPDLNTLYITSARSGMS-RMLTADPLGGGL 292 (307)
T ss_pred ----E-----EEEEECCCCCCccceEe---CCCcCEEEEEecCCCCC-ccccccccCceE
Confidence 1 12455663 21111111 22357777777766665 322234434443
No 225
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=97.17 E-value=0.034 Score=53.80 Aligned_cols=149 Identities=19% Similarity=0.206 Sum_probs=89.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
.+..+.|.-||++||-.+. ++ .+.|++++.++.+..-. .+.+..+.|.|-..-++.+...+ ..|.++
T Consensus 22 ~v~Sv~wn~~g~~lasgs~-dk----tv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~d----k~ir~w 92 (313)
T KOG1407|consen 22 KVHSVAWNCDGTKLASGSF-DK----TVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGD----KTIRIW 92 (313)
T ss_pred cceEEEEcccCceeeeccc-CC----ceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCC----ceEEEE
Confidence 4556789999999998753 22 36788887774332211 12445688998877777775432 267778
Q ss_pred EcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC---ceEEeeeecCCEE
Q 004866 199 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG---LAHCIVEHHEGFL 275 (726)
Q Consensus 199 ~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~---~~~~~~~~~g~~l 275 (726)
|+.+++....+ +...+. ..+.|||||+++++.... ..|-.+|..+ .+++...+. ..+..+. ..+.+
T Consensus 93 d~r~~k~~~~i-~~~~en--i~i~wsp~g~~~~~~~kd---D~it~id~r~----~~~~~~~~~~~e~ne~~w~-~~nd~ 161 (313)
T KOG1407|consen 93 DIRSGKCTARI-ETKGEN--INITWSPDGEYIAVGNKD---DRITFIDART----YKIVNEEQFKFEVNEISWN-NSNDL 161 (313)
T ss_pred EeccCcEEEEe-eccCcc--eEEEEcCCCCEEEEecCc---ccEEEEEecc----cceeehhcccceeeeeeec-CCCCE
Confidence 88776522222 112222 347899999999876654 3567777654 222222221 2233343 55668
Q ss_pred EEEecCcccCCCCCCeEEEEee
Q 004866 276 YLFTDAAKEGQEADNHYLLRCP 297 (726)
Q Consensus 276 ~~~t~~~~~~~~~~~~~l~~~~ 297 (726)
+|++|..+ ...|+.++
T Consensus 162 Fflt~GlG------~v~ILsyp 177 (313)
T KOG1407|consen 162 FFLTNGLG------CVEILSYP 177 (313)
T ss_pred EEEecCCc------eEEEEecc
Confidence 88888643 35566665
No 226
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=97.13 E-value=0.04 Score=54.79 Aligned_cols=130 Identities=13% Similarity=0.150 Sum_probs=79.4
Q ss_pred cEEEeecccccccCCceEEee---ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc--eec---cc--cccccceeEE
Q 004866 105 EQKLLDYNQEAERFGGYAYEE---LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA--LCS---KP--QAVRVSNIAW 174 (726)
Q Consensus 105 ~~~lld~n~~~~~~~~~~~~~---~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~--~~~---~~--~~~~~~~~~W 174 (726)
.-.|.|.+. .++.+ ...+. -.++.|.|=.+|.+. +++ .|.++|+..-. +.. +. ....+..+.|
T Consensus 123 tvrLWDlR~-~~cqg-~l~~~~~pi~AfDp~GLifA~~~---~~~--~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~F 195 (311)
T KOG1446|consen 123 TVRLWDLRV-KKCQG-LLNLSGRPIAAFDPEGLIFALAN---GSE--LIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEF 195 (311)
T ss_pred eEEeeEecC-CCCce-EEecCCCcceeECCCCcEEEEec---CCC--eEEEEEecccCCCCceeEccCCCCccceeeeEE
Confidence 445677662 23332 33332 247999997777764 232 48888876532 111 11 1336788999
Q ss_pred ecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeee-c-CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 175 AKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEE-S-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 175 spDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~-~-d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
|||||.|+.+.. ...++++|.-++.. .-.+++ + ....-++..++|||++|+..+.++ .|++++++++
T Consensus 196 S~dGK~iLlsT~-----~s~~~~lDAf~G~~-~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg---~i~vw~~~tg 264 (311)
T KOG1446|consen 196 SPDGKSILLSTN-----ASFIYLLDAFDGTV-KSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDG---TIHVWNLETG 264 (311)
T ss_pred cCCCCEEEEEeC-----CCcEEEEEccCCcE-eeeEeeccCCCCcceeEEECCCCcEEEEecCCC---cEEEEEcCCC
Confidence 999999999853 34688888766641 112221 1 222336788999999998665533 5788888774
No 227
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.11 E-value=0.037 Score=58.21 Aligned_cols=230 Identities=16% Similarity=0.123 Sum_probs=132.0
Q ss_pred EEEEEcCCCCCCCCccEEEEEcCCCCC---CCCccc-hHHHHHHHH-CCcEEEEE-ccCCCCC-CCC-------------
Q 004866 480 LTIIYSPKYKKENQNPGLLHGHGAYGE---LLDKRW-RSELKSLLD-RGWVVAFA-DVRGGGG-GGK------------- 539 (726)
Q Consensus 480 ~~l~~p~~~~~~~~~P~vl~~hGg~~~---~~~~~~-~~~~~~l~~-~G~~v~~~-d~RG~g~-~g~------------- 539 (726)
..|+.|++. ..+...+|++-||... ...+.+ ......+|. -|-+|+.. +++-+.- |..
T Consensus 52 l~I~vP~~~--~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iIAy 129 (367)
T PF10142_consen 52 LTIYVPKND--KNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAIIAY 129 (367)
T ss_pred EEEEECCCC--CCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHHHH
Confidence 457778762 2445688999988621 111222 334455555 35555543 3333321 111
Q ss_pred ccc---ccccccCCC-----CcHHHHHHHHHHHH-HcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeC-Cccc
Q 004866 540 KWH---HDGRRTKKL-----NSIKDFISCARFLI-EKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEV-PFLD 609 (726)
Q Consensus 540 ~~~---~~~~~~~~~-----~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~-p~~d 609 (726)
.|. +.+...|-. ...--.+++++.+. ++...+.++-.|.|.|==|..+..++. ...|++|++..+ +++|
T Consensus 130 tW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN 208 (367)
T PF10142_consen 130 TWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLN 208 (367)
T ss_pred HHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCC
Confidence 121 111111110 01222233444443 334567799999999999999888877 567777776432 3444
Q ss_pred cccccc-----CC-CCCCChhhhcccCCC---CChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHH
Q 004866 610 ATNTLL-----YP-ILPLIAADYEEFGYP---GDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVAR 680 (726)
Q Consensus 610 ~~~~~~-----~~-~~~~~~~~~~~~g~~---~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~ 680 (726)
+...+. +. ..+.....|...|-. ..++..+.+.-.+|+.+.++ ...|-++|.+..|+--.+..+.-++..
T Consensus 209 ~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~~Y~~r-L~~PK~ii~atgDeFf~pD~~~~y~d~ 287 (367)
T PF10142_consen 209 MKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLMQIVDPYSYRDR-LTMPKYIINATGDEFFVPDSSNFYYDK 287 (367)
T ss_pred cHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHHHhcCHHHHHHh-cCccEEEEecCCCceeccCchHHHHhh
Confidence 433211 11 222222222222322 23455566677899999987 799999999999988888899999999
Q ss_pred HHhcCCCCCCCcEEEEcCCCCCCCchhhHHHHHHHHHHHHHHh
Q 004866 681 VRESTIYDPKRPILLNLTTDIVEENRYLQCKESALETAFLIKM 723 (726)
Q Consensus 681 L~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~fl~~~ 723 (726)
|...+ .+.+.|+++|+... ........+|+...
T Consensus 288 L~G~K------~lr~vPN~~H~~~~----~~~~~~l~~f~~~~ 320 (367)
T PF10142_consen 288 LPGEK------YLRYVPNAGHSLIG----SDVVQSLRAFYNRI 320 (367)
T ss_pred CCCCe------eEEeCCCCCcccch----HHHHHHHHHHHHHH
Confidence 98633 34447999998655 22333456777654
No 228
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.09 E-value=0.017 Score=60.66 Aligned_cols=207 Identities=13% Similarity=0.019 Sum_probs=119.0
Q ss_pred cEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch-HHHHHHHH-CCcEEEEEccCCCCC---CCCccccc------
Q 004866 476 ISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLD-RGWVVAFADVRGGGG---GGKKWHHD------ 544 (726)
Q Consensus 476 ~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~-~G~~v~~~d~RG~g~---~g~~~~~~------ 544 (726)
.++...+.|... +.--.||++=||+|+..+..|. ...+.+|+ -+.+|+.++|.|.+. +|..+.-.
T Consensus 20 sKLEyri~ydd~----Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~i 95 (403)
T PF11144_consen 20 SKLEYRISYDDE----KEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDKEI 95 (403)
T ss_pred ceeeEEeecCCC----CCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHHHH
Confidence 356666666543 2234677777788877665554 45677777 488888888888663 22211100
Q ss_pred --------------------------------------cc--------------------ccCCCCcHHHHHHHHHHHHH
Q 004866 545 --------------------------------------GR--------------------RTKKLNSIKDFISCARFLIE 566 (726)
Q Consensus 545 --------------------------------------~~--------------------~~~~~~~~~D~~~~~~~l~~ 566 (726)
+. .++|.-...|.+.|+.++++
T Consensus 96 Lk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k 175 (403)
T PF11144_consen 96 LKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKK 175 (403)
T ss_pred HHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHH
Confidence 00 00122245677888888887
Q ss_pred cCCCC--CCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccc-ccccCCCCC-----------------C----C
Q 004866 567 KEIVK--EHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDAT-NTLLYPILP-----------------L----I 622 (726)
Q Consensus 567 ~~~~d--~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~-~~~~~~~~~-----------------~----~ 622 (726)
.-... .-++..+|+|+|||++..++.-.|.+|.+++-.++.+-.. .......+. + -
T Consensus 176 ~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~p~l~~I~Gre~~~~~y~~~~~~~~~~~~~i~~~~K 255 (403)
T PF11144_consen 176 IFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYALPPLRYIFGREIDFMKYICSGEFFNFKNIRIYCFDK 255 (403)
T ss_pred hhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCccccchhheeeeeecCcccccccccccccCCEEEEEEec
Confidence 62222 3489999999999999999999999999999776654321 111100000 0 0
Q ss_pred hhhhcccCCCC--ChhHHHHHHhcCcccccccCC---CCCe-EEEEecCCCCcChHHHHHHHHHHHhcCCC
Q 004866 623 AADYEEFGYPG--DIDDFHAIRNYSPYDNIQKDV---LYPA-VLVTSSFNTRFGVWEAAKWVARVRESTIY 687 (726)
Q Consensus 623 ~~~~~~~g~~~--~~~~~~~~~~~sp~~~i~~~~---~~P~-lli~g~~D~~V~~~~~~~~~~~L~~~~~~ 687 (726)
..|....+.|. .++ ...++..--..++.-+. +.|. +..|+..|+.+|+.+-.++++.|+++|-+
T Consensus 256 t~Wt~n~~S~~~Fs~~-~~~IR~iLn~~HL~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfd 325 (403)
T PF11144_consen 256 TFWTRNKNSPYYFSKA-RYIIRSILNPDHLKIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFD 325 (403)
T ss_pred cccccCCCCccccChH-HHHHHHhcChHHHHHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCC
Confidence 00111112221 111 12233222222222111 2233 45688889999999999999999999965
No 229
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.08 E-value=0.01 Score=59.37 Aligned_cols=196 Identities=15% Similarity=0.119 Sum_probs=96.6
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHH-HCCcE--EEEEcc--CCCCCCCCccccc--------ccccCCCCc----HHH
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLL-DRGWV--VAFADV--RGGGGGGKKWHHD--------GRRTKKLNS----IKD 556 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~-~~G~~--v~~~d~--RG~g~~g~~~~~~--------~~~~~~~~~----~~D 556 (726)
.|+ |++||.-+. ..+|..+++.+. ++|.+ ++.+++ -|.=.+...|... ...++.... ..=
T Consensus 12 tPT-ifihG~~gt--~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 12 TPT-IFIHGYGGT--ANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp EEE-EEE--TTGG--CCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred CcE-EEECCCCCC--hhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 444 577775443 356889999987 55542 444443 3432332222211 111111112 233
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcC------CCceeEEEEeCCcccccccccCCCCCCChhhhcccC
Q 004866 557 FISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC------PDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFG 630 (726)
Q Consensus 557 ~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g 630 (726)
+..++.+|.++--+ +++=++||||||......+..+ |.+=+-+...+|+-...... . .........-|
T Consensus 89 l~~vl~~L~~~Y~~--~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~-~---~~~~~~~~~~g 162 (255)
T PF06028_consen 89 LKKVLKYLKKKYHF--KKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMN-D---DQNQNDLNKNG 162 (255)
T ss_dssp HHHHHHHHHHCC----SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCS-C----TTTT-CSTT-
T ss_pred HHHHHHHHHHhcCC--CEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcccccc-c---cchhhhhcccC
Confidence 45567777766434 7999999999999999888764 33444444444544433211 1 00001112234
Q ss_pred CCCC-hhHHHHHHhc-CcccccccCCCCCeEEEEec------CCCCcChHHHHHHHHHHHhcCCCCCCCcEEE-EcCCCC
Q 004866 631 YPGD-IDDFHAIRNY-SPYDNIQKDVLYPAVLVTSS------FNTRFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDI 701 (726)
Q Consensus 631 ~~~~-~~~~~~~~~~-sp~~~i~~~~~~P~lli~g~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH 701 (726)
|.. .+.+..+.+. . .++.+ ...+|-|.|. .|-+||...++.+..-++..... -....+ -+++.|
T Consensus 163 -p~~~~~~y~~l~~~~~--~~~p~--~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~--Y~e~~v~G~~a~H 235 (255)
T PF06028_consen 163 -PKSMTPMYQDLLKNRR--KNFPK--NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKS--YQEKTVTGKDAQH 235 (255)
T ss_dssp -BSS--HHHHHHHHTHG--GGSTT--T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSE--EEEEEEESGGGSC
T ss_pred -CcccCHHHHHHHHHHH--hhCCC--CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCc--eEEEEEECCCCcc
Confidence 432 2334444432 1 23332 3446778887 67899998888887777765421 122333 345789
Q ss_pred CCCc
Q 004866 702 VEEN 705 (726)
Q Consensus 702 ~~~~ 705 (726)
+...
T Consensus 236 S~Lh 239 (255)
T PF06028_consen 236 SQLH 239 (255)
T ss_dssp CGGG
T ss_pred ccCC
Confidence 6444
No 230
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.08 E-value=0.15 Score=49.74 Aligned_cols=72 Identities=18% Similarity=0.227 Sum_probs=48.2
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
-++..++|||.|++||-.+ .+. +..|+.-..++..-+.. +..+-.++||++|+.|+-.+.+ ..||+
T Consensus 62 rsVRsvAwsp~g~~La~aS-FD~----t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRD-----KSVWi 131 (312)
T KOG0645|consen 62 RSVRSVAWSPHGRYLASAS-FDA----TVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRD-----KSVWI 131 (312)
T ss_pred heeeeeeecCCCcEEEEee-ccc----eEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCC-----CeEEE
Confidence 3678889999999999875 333 34555555554333222 3356789999999999877543 35777
Q ss_pred EEcCCC
Q 004866 198 SIIGST 203 (726)
Q Consensus 198 ~~l~t~ 203 (726)
..+..+
T Consensus 132 We~ded 137 (312)
T KOG0645|consen 132 WEIDED 137 (312)
T ss_pred EEecCC
Confidence 776543
No 231
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=97.07 E-value=0.088 Score=53.14 Aligned_cols=119 Identities=15% Similarity=0.032 Sum_probs=71.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
.+..+++||||+.+|+.....+ ...|++....+.....+ .......+.|++||. ++..... .....+++ +..+
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~--~~~L~~~~~~~~~~~~~-~g~~l~~PS~d~~g~-~W~v~~~--~~~~~~~~-~~~~ 97 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDG--GRSLYVGPAGGPVRPVL-TGGSLTRPSWDPDGW-VWTVDDG--SGGVRVVR-DSAS 97 (253)
T ss_pred cccceEECCCCCeEEEEEEcCC--CCEEEEEcCCCcceeec-cCCccccccccCCCC-EEEEEcC--CCceEEEE-ecCC
Confidence 4567889999999999873222 45689888765443332 333677899999965 5444222 12223332 2222
Q ss_pred CC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCC
Q 004866 203 TD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAA 248 (726)
Q Consensus 203 ~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~ 248 (726)
+. ....+-......-...+.+||||..+++........+||+.-+.
T Consensus 98 g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~ 144 (253)
T PF10647_consen 98 GTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVV 144 (253)
T ss_pred CcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEE
Confidence 32 22222111111123568999999999999877777788887553
No 232
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=97.07 E-value=0.0071 Score=56.66 Aligned_cols=82 Identities=20% Similarity=0.178 Sum_probs=56.7
Q ss_pred HHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 514 SELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 514 ~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
.....|+++|+.|+-+|-+- -|.. .........|+...+++..++- ..+|+.++|.|+|+=+.-.+.++
T Consensus 20 ~~a~~l~~~G~~VvGvdsl~------Yfw~---~rtP~~~a~Dl~~~i~~y~~~w--~~~~vvLiGYSFGADvlP~~~nr 88 (192)
T PF06057_consen 20 QIAEALAKQGVPVVGVDSLR------YFWS---ERTPEQTAADLARIIRHYRARW--GRKRVVLIGYSFGADVLPFIYNR 88 (192)
T ss_pred HHHHHHHHCCCeEEEechHH------HHhh---hCCHHHHHHHHHHHHHHHHHHh--CCceEEEEeecCCchhHHHHHhh
Confidence 45688999999999999541 1111 1122345677777777666552 44899999999999999999998
Q ss_pred CCCc----eeEEEEeCC
Q 004866 594 CPDL----FRAVVLEVP 606 (726)
Q Consensus 594 ~p~~----f~a~v~~~p 606 (726)
.|.- ++.+++.+|
T Consensus 89 Lp~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 89 LPAALRARVAQVVLLSP 105 (192)
T ss_pred CCHHHHhheeEEEEecc
Confidence 8874 444554444
No 233
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=97.02 E-value=0.33 Score=47.53 Aligned_cols=194 Identities=15% Similarity=0.131 Sum_probs=106.2
Q ss_pred EeeceeeCCC-CCEEEEEEeCCCCcEEEEEEEECCCCceec-ccc-----ccccceeEEecCCCEEEEEEecCCCCCceE
Q 004866 123 YEELSEVSPD-HKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-----AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 195 (726)
Q Consensus 123 ~~~~~~~SPD-G~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l 195 (726)
.+-.++|+|- |..||-. |. .-.|+++++.++.... .+. .-.+..++|+|.|+.|+-.++|.+- -|
T Consensus 16 r~W~~awhp~~g~ilAsc----g~-Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~---~I 87 (312)
T KOG0645|consen 16 RVWSVAWHPGKGVILASC----GT-DKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATV---VI 87 (312)
T ss_pred cEEEEEeccCCceEEEee----cC-CceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceE---EE
Confidence 3555689998 7744332 22 2358999988654322 111 2256789999999988888776531 22
Q ss_pred EEEEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe---EEeeccCCceEEeeeec
Q 004866 196 YCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL---TLIWECEGLAHCIVEHH 271 (726)
Q Consensus 196 ~~~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~---~~l~~~~~~~~~~~~~~ 271 (726)
|. + ..+. +-.-+.+..+.. .=.++||++|.+|+..+..+ .+|++....+ .+. ..|.+...++.-.+.|.
T Consensus 88 w~-k-~~~efecv~~lEGHEnE-VK~Vaws~sG~~LATCSRDK---SVWiWe~ded-dEfec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 88 WK-K-EDGEFECVATLEGHENE-VKCVAWSASGNYLATCSRDK---SVWIWEIDED-DEFECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred ee-c-CCCceeEEeeeeccccc-eeEEEEcCCCCEEEEeeCCC---eEEEEEecCC-CcEEEEeeeccccccccEEEEcC
Confidence 22 2 2222 222222222221 22578999999998766543 4677766532 333 23444555555555566
Q ss_pred CCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCC-CceEE--EEeeeCCEEEEEEEeCCeeEEEE
Q 004866 272 EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ-GLVVE--DVDFCKTHMALILREGRTYRLCS 343 (726)
Q Consensus 272 g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~-~~~l~--~~~~~~~~lv~~~~~~g~~~l~~ 343 (726)
-..|++....+. ..++++-..+ ..|+.+..-+. ...+- .|+..+.+|+ ...+++.-.|++
T Consensus 161 t~dlL~S~SYDn------TIk~~~~~~d-----ddW~c~~tl~g~~~TVW~~~F~~~G~rl~-s~sdD~tv~Iw~ 223 (312)
T KOG0645|consen 161 TEDLLFSCSYDN------TIKVYRDEDD-----DDWECVQTLDGHENTVWSLAFDNIGSRLV-SCSDDGTVSIWR 223 (312)
T ss_pred CcceeEEeccCC------eEEEEeecCC-----CCeeEEEEecCccceEEEEEecCCCceEE-EecCCcceEeee
Confidence 666777776653 2566665433 56765432221 11222 2333344544 556667777776
No 234
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=97.01 E-value=0.072 Score=52.97 Aligned_cols=108 Identities=13% Similarity=0.188 Sum_probs=64.3
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 203 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~ 203 (726)
..+||+-|.+||.... +|. +.|+|+.|-..-.... .-.+.+++||+||+.|+-.+ +...+-++|+-.+
T Consensus 28 ~~~Fs~~G~~lAvGc~-nG~----vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS-----~D~si~lwDl~~g 97 (405)
T KOG1273|consen 28 CCQFSRWGDYLAVGCA-NGR----VVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSS-----RDWSIKLWDLLKG 97 (405)
T ss_pred eEEeccCcceeeeecc-CCc----EEEEEccccchhhhhhccccceeEEEecCCCCEeeeec-----CCceeEEEeccCC
Confidence 4579999999999974 563 8999998865333211 22467899999999886553 2346777888666
Q ss_pred C-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 204 D-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 204 ~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
. ..++.|.. +-+ +..|.|-.+-.++.+.-.. .-++++..+
T Consensus 98 s~l~rirf~s--pv~--~~q~hp~k~n~~va~~~~~--sp~vi~~s~ 138 (405)
T KOG1273|consen 98 SPLKRIRFDS--PVW--GAQWHPRKRNKCVATIMEE--SPVVIDFSD 138 (405)
T ss_pred CceeEEEccC--ccc--eeeeccccCCeEEEEEecC--CcEEEEecC
Confidence 4 33344432 222 3455554443333322111 145566655
No 235
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=96.96 E-value=0.06 Score=54.21 Aligned_cols=149 Identities=13% Similarity=0.109 Sum_probs=83.7
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCC--cE--EEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDN--DY--FTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 195 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~--e~--~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l 195 (726)
.....+..+.|||+ |-++...... .. ..|+.++.+ ++...... ......++|+||++.||++... ..+|
T Consensus 85 ~~~~ND~~vd~~G~-ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ds~----~~~i 158 (246)
T PF08450_consen 85 FNRPNDVAVDPDGN-LYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVADSF----NGRI 158 (246)
T ss_dssp TEEEEEEEE-TTS--EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEEETT----TTEE
T ss_pred cCCCceEEEcCCCC-EEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeecccc----ccee
Confidence 44667788999999 4444322211 11 469999998 65444322 2344679999999999887432 3479
Q ss_pred EEEEcCCCC---c-eeEEeeecCC-ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeecc-CCceEEee-
Q 004866 196 YCSIIGSTD---E-DALLLEESNE-NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGLAHCIV- 268 (726)
Q Consensus 196 ~~~~l~t~~---~-~~lv~~~~d~-~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-~~~~~~~~- 268 (726)
+++++.... . ..++...... .+.-++.+..+|+ |++... ....|++++.++ .....+.-. .......+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~-l~va~~--~~~~I~~~~p~G--~~~~~i~~p~~~~t~~~fg 233 (246)
T PF08450_consen 159 WRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGN-LWVADW--GGGRIVVFDPDG--KLLREIELPVPRPTNCAFG 233 (246)
T ss_dssp EEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS--EEEEEE--TTTEEEEEETTS--CEEEEEE-SSSSEEEEEEE
T ss_pred EEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCC-EEEEEc--CCCEEEEECCCc--cEEEEEcCCCCCEEEEEEE
Confidence 999985332 2 2223232222 2345688888896 444443 335788888764 223333333 22223334
Q ss_pred eecCCEEEEEec
Q 004866 269 EHHEGFLYLFTD 280 (726)
Q Consensus 269 ~~~g~~l~~~t~ 280 (726)
.++.+.||+.|.
T Consensus 234 g~~~~~L~vTta 245 (246)
T PF08450_consen 234 GPDGKTLYVTTA 245 (246)
T ss_dssp STTSSEEEEEEB
T ss_pred CCCCCEEEEEeC
Confidence 256678888764
No 236
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=96.94 E-value=0.0011 Score=69.30 Aligned_cols=112 Identities=18% Similarity=0.177 Sum_probs=62.0
Q ss_pred CCCccEEEEEcCCCCCCCCccch-HHHHHHHH---CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHH
Q 004866 491 ENQNPGLLHGHGAYGELLDKRWR-SELKSLLD---RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE 566 (726)
Q Consensus 491 ~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~---~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 566 (726)
+.+.|++|++||..+......|. .....|.+ +++.|+++|+...... .+..+... -...-.-+...+..|.+
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~--~Y~~a~~n--~~~vg~~la~~l~~L~~ 143 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN--NYPQAVAN--TRLVGRQLAKFLSFLIN 143 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS---HHHHHHH--HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc--cccchhhh--HHHHHHHHHHHHHHHHh
Confidence 45679999999976655233443 44555555 4899999998743221 11111100 00011222334666665
Q ss_pred cCCCCCCcEEEEEecccHHHHHHHHHcCCC--ceeEEEEeCC
Q 004866 567 KEIVKEHKLAGWGYSAGGLLVAAAINCCPD--LFRAVVLEVP 606 (726)
Q Consensus 567 ~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~~p 606 (726)
...+++++|-|+|||.||++++.+...... .+..+...-|
T Consensus 144 ~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDP 185 (331)
T PF00151_consen 144 NFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDP 185 (331)
T ss_dssp HH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-
T ss_pred hcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCc
Confidence 555789999999999999999999987766 5566665444
No 237
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.93 E-value=0.0069 Score=59.86 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=55.5
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHH--------HHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHH
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSL--------LDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE 566 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l--------~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~ 566 (726)
..||++||..|+. ..+......+ ....+.++..|+..... .++ +..-....+-+..+++.+.+
T Consensus 5 ~pVlFIhG~~Gs~--~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s---~~~----g~~l~~q~~~~~~~i~~i~~ 75 (225)
T PF07819_consen 5 IPVLFIHGNAGSY--KQVRSLASELQRKALLNDNSSHFDFFTVDFNEELS---AFH----GRTLQRQAEFLAEAIKYILE 75 (225)
T ss_pred CEEEEECcCCCCH--hHHHHHHHHHhhhhhhccCccceeEEEeccCcccc---ccc----cccHHHHHHHHHHHHHHHHH
Confidence 5688999854432 1222222211 11257788888765321 111 11101122334456666654
Q ss_pred c---CCCCCCcEEEEEecccHHHHHHHHHcCC---CceeEEEEe
Q 004866 567 K---EIVKEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLE 604 (726)
Q Consensus 567 ~---~~~d~~ri~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~ 604 (726)
. ....+.+|.++||||||.++-.++...+ +.++.+|..
T Consensus 76 ~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl 119 (225)
T PF07819_consen 76 LYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITL 119 (225)
T ss_pred hhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEE
Confidence 3 2457899999999999998888776533 345555543
No 238
>COG3150 Predicted esterase [General function prediction only]
Probab=96.92 E-value=0.022 Score=51.49 Aligned_cols=52 Identities=21% Similarity=0.123 Sum_probs=35.2
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 552 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
......++-++.++++. .|+ .++|+|.|.|||.+.++..++. +++++ ..|.+
T Consensus 40 h~p~~a~~ele~~i~~~-~~~-~p~ivGssLGGY~At~l~~~~G--irav~-~NPav 91 (191)
T COG3150 40 HDPQQALKELEKAVQEL-GDE-SPLIVGSSLGGYYATWLGFLCG--IRAVV-FNPAV 91 (191)
T ss_pred CCHHHHHHHHHHHHHHc-CCC-CceEEeecchHHHHHHHHHHhC--Chhhh-cCCCc
Confidence 35566677777777653 232 3899999999999999998752 34443 34443
No 239
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.92 E-value=0.035 Score=60.73 Aligned_cols=83 Identities=22% Similarity=0.348 Sum_probs=67.5
Q ss_pred CCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEE
Q 004866 103 KIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQAL 181 (726)
Q Consensus 103 ~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l 181 (726)
.++++++|+|.++.+ ++..+..-++|-|+++++|.....|.+.-.|-.+..+.|....... .-.+..++|.+|++.+
T Consensus 107 ~e~~~~ld~~~~~dd--~tV~Ld~~~~aed~~Y~~~gls~~spD~~~ia~~~~~~~~e~~~~v~~~~~~~~~~~~~~~g~ 184 (712)
T KOG2237|consen 107 KEEEVFLDPNALGDD--GTVLLDTNQIAEDFKYFAYGLSESSPDHKYIAYTKDTEGKELFTVVIDVKFSGPVWTHDGKGV 184 (712)
T ss_pred cccceecCCccCCCC--ceEEechhhhhhcCCceEEeecccCCCceEEEEEEcCCCCccceeeeeeccCCceeeccCCce
Confidence 678999999999877 5778888899999999999998888887777777777776554333 5577889999999999
Q ss_pred EEEEec
Q 004866 182 IYVVTD 187 (726)
Q Consensus 182 ~y~~~~ 187 (726)
+|.+..
T Consensus 185 ~y~~w~ 190 (712)
T KOG2237|consen 185 SYLAWA 190 (712)
T ss_pred Eeeeec
Confidence 887653
No 240
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.90 E-value=0.012 Score=61.43 Aligned_cols=86 Identities=21% Similarity=0.304 Sum_probs=61.5
Q ss_pred hHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHH-----HHHHHHHHcCCCCCCcEEEEEecccHHHH
Q 004866 513 RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFI-----SCARFLIEKEIVKEHKLAGWGYSAGGLLV 587 (726)
Q Consensus 513 ~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~-----~~~~~l~~~~~~d~~ri~i~G~S~GG~l~ 587 (726)
...+..|+++|..|+.++.|+-...-. ...++|.+ .|++.+.+. +-.++|=+.|+|.||.+.
T Consensus 129 ~s~V~~l~~~g~~vfvIsw~nPd~~~~-----------~~~~edYi~e~l~~aid~v~~i--tg~~~InliGyCvGGtl~ 195 (445)
T COG3243 129 KSLVRWLLEQGLDVFVISWRNPDASLA-----------AKNLEDYILEGLSEAIDTVKDI--TGQKDINLIGYCVGGTLL 195 (445)
T ss_pred ccHHHHHHHcCCceEEEeccCchHhhh-----------hccHHHHHHHHHHHHHHHHHHH--hCccccceeeEecchHHH
Confidence 456789999999999999987553211 23455554 555555543 344789999999999999
Q ss_pred HHHHHcCCCc-eeEEEEeCCccccc
Q 004866 588 AAAINCCPDL-FRAVVLEVPFLDAT 611 (726)
Q Consensus 588 ~~~~~~~p~~-f~a~v~~~p~~d~~ 611 (726)
+.++..++.. ++.+......+|..
T Consensus 196 ~~ala~~~~k~I~S~T~lts~~DF~ 220 (445)
T COG3243 196 AAALALMAAKRIKSLTLLTSPVDFS 220 (445)
T ss_pred HHHHHhhhhcccccceeeecchhhc
Confidence 9888877776 77777666555543
No 241
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=96.88 E-value=0.0022 Score=69.41 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=63.0
Q ss_pred ccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHH
Q 004866 510 KRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAA 589 (726)
Q Consensus 510 ~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~ 589 (726)
..|...+..|.+.||.+ ..|.+|.| ..|+.... ....++++.+.++.+.++ ....++.|+||||||.++..
T Consensus 108 ~~~~~li~~L~~~GY~~-~~dL~g~g---YDwR~~~~---~~~~~~~Lk~lIe~~~~~--~g~~kV~LVGHSMGGlva~~ 178 (440)
T PLN02733 108 YYFHDMIEQLIKWGYKE-GKTLFGFG---YDFRQSNR---LPETMDGLKKKLETVYKA--SGGKKVNIISHSMGGLLVKC 178 (440)
T ss_pred HHHHHHHHHHHHcCCcc-CCCcccCC---CCcccccc---HHHHHHHHHHHHHHHHHH--cCCCCEEEEEECHhHHHHHH
Confidence 45778889999999976 67999866 34554211 122456666666666543 22368999999999999999
Q ss_pred HHHcCCCc----eeEEEEeCCcc
Q 004866 590 AINCCPDL----FRAVVLEVPFL 608 (726)
Q Consensus 590 ~~~~~p~~----f~a~v~~~p~~ 608 (726)
.+..+|+. ++..|+.++..
T Consensus 179 fl~~~p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 179 FMSLHSDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred HHHHCCHhHHhHhccEEEECCCC
Confidence 88888874 46666665543
No 242
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=96.87 E-value=0.0016 Score=68.39 Aligned_cols=112 Identities=19% Similarity=0.098 Sum_probs=73.7
Q ss_pred EEEEEcCCCCCCCCccch-HHHHHHHH-CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCC---C
Q 004866 496 GLLHGHGAYGELLDKRWR-SELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEI---V 570 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~-~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~---~ 570 (726)
++|++|||--.+-.++.. .....|+. ...+|+.+|||=+. +|--+.-......|.-..-|..-|++|+.++-. -
T Consensus 137 VlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~-FGFL~l~~~~eaPGNmGl~DQqLAl~WV~~Ni~aFGG 215 (601)
T KOG4389|consen 137 VLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGA-FGFLYLPGHPEAPGNMGLLDQQLALQWVQENIAAFGG 215 (601)
T ss_pred EEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeecc-ceEEecCCCCCCCCccchHHHHHHHHHHHHhHHHhCC
Confidence 889999963222222222 12345555 46888999999543 444333222333444567899999999987622 2
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCC---CceeEEEEeCCccc
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCP---DLFRAVVLEVPFLD 609 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p---~~f~a~v~~~p~~d 609 (726)
||+||.++|.|+|+..+.+=+. .| .+|+-+|+++|-.+
T Consensus 216 np~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSGS~~ 256 (601)
T KOG4389|consen 216 NPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSGSLN 256 (601)
T ss_pred CcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcCCCC
Confidence 9999999999999866654333 24 38999999998765
No 243
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=96.85 E-value=0.51 Score=48.65 Aligned_cols=163 Identities=10% Similarity=0.119 Sum_probs=80.8
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
...+++|.|||++.+. +..- ...+-|+|++.++.+.... .+...-+-|.++ .|+-...| ..+..+.++.
T Consensus 97 ~~~~~ls~dgk~~~V~-N~TP--a~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~--~F~~lC~D-----Gsl~~v~Ld~ 166 (342)
T PF06433_consen 97 KNMFALSADGKFLYVQ-NFTP--ATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNR--GFSMLCGD-----GSLLTVTLDA 166 (342)
T ss_dssp GGGEEE-TTSSEEEEE-EESS--SEEEEEEETTTTEEEEEEEGTSEEEEEEEETT--EEEEEETT-----SCEEEEEETS
T ss_pred ccceEEccCCcEEEEE-ccCC--CCeEEEEECCCCceeeeecCCCEEEEEecCCC--ceEEEecC-----CceEEEEECC
Confidence 3456899999998654 4332 2459999999998876543 333333344433 22211111 1233334432
Q ss_pred CC-c---eeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeE-Ee---ecc--C-----CceE-E
Q 004866 203 TD-E---DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLT-LI---WEC--E-----GLAH-C 266 (726)
Q Consensus 203 ~~-~---~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-~l---~~~--~-----~~~~-~ 266 (726)
.. . ..-+|...+++.|....++.++..++|.+..+ .||.+|+.+...++. +. +.. . ++.+ .
T Consensus 167 ~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G---~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~ 243 (342)
T PF06433_consen 167 DGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEG---NVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLI 243 (342)
T ss_dssp TSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTS---EEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-E
T ss_pred CCCEeEeeccccCCCCcccccccceECCCCeEEEEecCC---EEEEEeccCCcccccCcccccCccccccCcCCcceeee
Confidence 21 1 11244444444455566677776667766544 689999877432211 11 111 0 1111 2
Q ss_pred eeeecCCEEEEEecCcccC-CCCCCeEEEEeeCC
Q 004866 267 IVEHHEGFLYLFTDAAKEG-QEADNHYLLRCPVD 299 (726)
Q Consensus 267 ~~~~~g~~l~~~t~~~~~~-~~~~~~~l~~~~~~ 299 (726)
.+.+..++||++-+.+.+. .......|+.+|+.
T Consensus 244 A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~ 277 (342)
T PF06433_consen 244 AYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLK 277 (342)
T ss_dssp EEETTTTEEEEEEEE--TT-TTS-EEEEEEEETT
T ss_pred eeccccCeEEEEecCCCCCCccCCceEEEEEECC
Confidence 2334567888887643322 11223678888886
No 244
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=96.85 E-value=0.0094 Score=68.16 Aligned_cols=120 Identities=12% Similarity=0.115 Sum_probs=75.0
Q ss_pred CCEEEEEEeCCCCcEEEEEEEECCCCceecc-cc-ccccceeEEecCCCEEEE-EEecCCCCCceEEEEEcCCCCceeE-
Q 004866 133 HKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ-AVRVSNIAWAKDGQALIY-VVTDQNKRPYQIYCSIIGSTDEDAL- 208 (726)
Q Consensus 133 G~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~~l~y-~~~~~~~~~~~l~~~~l~t~~~~~l- 208 (726)
..+|||..+..| .|.++|.+++....+ .. ...+..+.|||||+.|+| +......+...||+.+|.+.....+
T Consensus 318 ~tkiAfv~~~~~----~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vk 393 (912)
T TIGR02171 318 KAKLAFRNDVTG----NLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVK 393 (912)
T ss_pred eeeEEEEEcCCC----eEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceE
Confidence 356999987555 699999998876654 33 445678999999999999 6554423456799999987653222
Q ss_pred -EeeecC-CceEEEEEEcCCCcEEEEEEcCCCc---------eEEEEEeCCCCC-CCeEEeecc
Q 004866 209 -LLEESN-ENVYVNIRHTKDFHFVCVHTFSTTS---------SKVFLINAADPF-SGLTLIWEC 260 (726)
Q Consensus 209 -v~~~~d-~~~~~~~~~s~Dg~~l~~~~~~~~~---------~~l~~~d~~~~~-~~~~~l~~~ 260 (726)
-.+... +++ .+.++|..+++...+.+. ..-|.+....++ ++++.|...
T Consensus 394 l~ve~aaiprw----rv~e~gdt~ivyv~~a~nn~d~~~~~~~stw~v~f~~gkfg~p~kl~dg 453 (912)
T TIGR02171 394 LPVENAAIPRW----RVLENGDTVIVYVSDASNNKDDATFAAYSTWQVPFANGKFGTPKKLFDG 453 (912)
T ss_pred eecccccccce----EecCCCCeEEEEEcCCCCCcchhhhhhcceEEEEecCCCCCCchhhhcc
Confidence 112111 222 347778776554433221 235777766543 556666543
No 245
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=96.85 E-value=0.023 Score=63.98 Aligned_cols=114 Identities=13% Similarity=0.220 Sum_probs=71.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc---ccc-------cccceeEEecCCCEEEEEEecCCCCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK---PQA-------VRVSNIAWAKDGQALIYVVTDQNKRP 192 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~---~~~-------~~~~~~~WspDg~~l~y~~~~~~~~~ 192 (726)
.+..+.++|.|+.||.+. .+| .+++||+.++..... ... ..+..++|+|||..|++...+.
T Consensus 140 pVl~l~~~p~~~fLAvss-~dG----~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~---- 210 (933)
T KOG1274|consen 140 PVLQLSYDPKGNFLAVSS-CDG----KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDN---- 210 (933)
T ss_pred ceeeeeEcCCCCEEEEEe-cCc----eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCC----
Confidence 567788999999999985 566 499999999864321 111 1245689999977777664432
Q ss_pred ceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 193 YQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 193 ~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.|..++..+-...-.+-......-+..++|||.|+||+-..- ..+|-++|.++
T Consensus 211 -~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~---~g~I~vWnv~t 263 (933)
T KOG1274|consen 211 -TVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTL---DGQILVWNVDT 263 (933)
T ss_pred -eEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeecc---CCcEEEEeccc
Confidence 455555544321111111111222567899999999975443 34677777764
No 246
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.84 E-value=0.0094 Score=65.60 Aligned_cols=132 Identities=14% Similarity=0.017 Sum_probs=77.7
Q ss_pred CcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccc----------------hHHHHHHHHCCcEEEEEc-cCCCCCC
Q 004866 475 GISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW----------------RSELKSLLDRGWVVAFAD-VRGGGGG 537 (726)
Q Consensus 475 G~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~----------------~~~~~~l~~~G~~v~~~d-~RG~g~~ 537 (726)
+..+..|++..++. ....|+||+++||||.+..... ...-..|.+.+ .++.+| .+|.|-+
T Consensus 60 ~~~lFyw~~~s~~~--~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~-~~l~iDqP~G~G~S 136 (462)
T PTZ00472 60 DKHYFYWAFGPRNG--NPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEA-YVIYVDQPAGVGFS 136 (462)
T ss_pred CceEEEEEEEcCCC--CCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccccc-CeEEEeCCCCcCcc
Confidence 55777777766542 3457999999999996522111 00112455554 456666 5676632
Q ss_pred CCcccccccccCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEecccHHHHHHHHHcC---C-------CceeEEEEeCC
Q 004866 538 GKKWHHDGRRTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCC---P-------DLFRAVVLEVP 606 (726)
Q Consensus 538 g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~---p-------~~f~a~v~~~p 606 (726)
-.... .....-....+|+...++.+.++ +.....++.|+|+||||..+..++.+- . =-+++++...|
T Consensus 137 ~~~~~--~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 137 YADKA--DYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred cCCCC--CCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecc
Confidence 11100 00111123456776666655433 333457999999999998886666431 0 13788888888
Q ss_pred ccccc
Q 004866 607 FLDAT 611 (726)
Q Consensus 607 ~~d~~ 611 (726)
++|..
T Consensus 215 ~~dp~ 219 (462)
T PTZ00472 215 LTDPY 219 (462)
T ss_pred ccChh
Confidence 88764
No 247
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=96.82 E-value=0.64 Score=46.52 Aligned_cols=248 Identities=12% Similarity=0.023 Sum_probs=124.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+..+.+|+||..|+-+. .+. .|.++|..+|..+.... .-++.-+.|......+.+... .....|...++
T Consensus 16 ~i~sl~fs~~G~~litss-~dD----sl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt---k~d~tIryLsl 87 (311)
T KOG1446|consen 16 KINSLDFSDDGLLLITSS-EDD----SLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST---KEDDTIRYLSL 87 (311)
T ss_pred ceeEEEecCCCCEEEEec-CCC----eEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC---CCCCceEEEEe
Confidence 456678999999998753 222 48999999998766433 335566788888888888754 22346777777
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEec
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTD 280 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~ 280 (726)
-+.+ -.-.|..... -..++..+|-+... +++.. ...|+++|+.... .+-+..-........+|.|-.|++..+
T Consensus 88 ~dNk-ylRYF~GH~~-~V~sL~~sP~~d~F-lS~S~--D~tvrLWDlR~~~--cqg~l~~~~~pi~AfDp~GLifA~~~~ 160 (311)
T KOG1446|consen 88 HDNK-YLRYFPGHKK-RVNSLSVSPKDDTF-LSSSL--DKTVRLWDLRVKK--CQGLLNLSGRPIAAFDPEGLIFALANG 160 (311)
T ss_pred ecCc-eEEEcCCCCc-eEEEEEecCCCCeE-Eeccc--CCeEEeeEecCCC--CceEEecCCCcceeECCCCcEEEEecC
Confidence 6543 1112322222 23467778877544 33332 2357777876532 111211122223344555544433332
Q ss_pred CcccCCCCCCeEEEEeeCCCCCCCCCceEEeecC-CCceEE--EEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceee
Q 004866 281 AAKEGQEADNHYLLRCPVDASFPSRTWESVFIDD-QGLVVE--DVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHL 357 (726)
Q Consensus 281 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~-~~~~l~--~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~ 357 (726)
.. . .+|| |+. .-+++.++.+.... ...... .++..++.|++..+.+ .++++|--.|.-+ ..+
T Consensus 161 ~~--~-----IkLy--D~R-s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s---~~~~lDAf~G~~~--~tf 225 (311)
T KOG1446|consen 161 SE--L-----IKLY--DLR-SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNAS---FIYLLDAFDGTVK--STF 225 (311)
T ss_pred CC--e-----EEEE--Eec-ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCC---cEEEEEccCCcEe--eeE
Confidence 21 1 3343 333 33344444433221 122222 3455567777766543 3455553222100 000
Q ss_pred cccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEE
Q 004866 358 KELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNI 412 (726)
Q Consensus 358 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~ 412 (726)
.+.+....+|. +..+.+|+..+.... + =+.|+.|+++++....
T Consensus 226 -s~~~~~~~~~~-------~a~ftPds~Fvl~gs-~---dg~i~vw~~~tg~~v~ 268 (311)
T KOG1446|consen 226 -SGYPNAGNLPL-------SATFTPDSKFVLSGS-D---DGTIHVWNLETGKKVA 268 (311)
T ss_pred -eeccCCCCcce-------eEEECCCCcEEEEec-C---CCcEEEEEcCCCcEee
Confidence 01111112221 223456776543322 2 2478888888886543
No 248
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=96.82 E-value=0.0017 Score=44.33 Aligned_cols=28 Identities=29% Similarity=0.438 Sum_probs=20.2
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEE
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSV 152 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v 152 (726)
..+.|||||++|+|++++.+...++||+
T Consensus 12 ~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 12 GSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp EEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred cCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 4578999999999999887333567775
No 249
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.80 E-value=0.027 Score=64.63 Aligned_cols=141 Identities=13% Similarity=0.073 Sum_probs=81.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCC----------Cceeccc----------cccccceeEEecCCCEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS----------GALCSKP----------QAVRVSNIAWAKDGQALI 182 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t----------g~~~~~~----------~~~~~~~~~WspDg~~l~ 182 (726)
.+..++|||||++||..+|. ..|.||+-+. |...... -...+.++.|+||++.|+
T Consensus 71 sv~CVR~S~dG~~lAsGSDD-----~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lv 145 (942)
T KOG0973|consen 71 SVNCVRFSPDGSYLASGSDD-----RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLV 145 (942)
T ss_pred ceeEEEECCCCCeEeeccCc-----ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEE
Confidence 67778999999999997653 3567777662 1111100 023567899999998776
Q ss_pred EEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC
Q 004866 183 YVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 262 (726)
Q Consensus 183 y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 262 (726)
-...| +.|.+++..+.. ...+.. ......-++.|.|-|||++-.+.+. +-.+|. +.+ -+-.+.++...+
T Consensus 146 S~s~D-----nsViiwn~~tF~-~~~vl~-~H~s~VKGvs~DP~Gky~ASqsdDr-tikvwr--t~d-w~i~k~It~pf~ 214 (942)
T KOG0973|consen 146 SVSLD-----NSVIIWNAKTFE-LLKVLR-GHQSLVKGVSWDPIGKYFASQSDDR-TLKVWR--TSD-WGIEKSITKPFE 214 (942)
T ss_pred Eeccc-----ceEEEEccccce-eeeeee-cccccccceEECCccCeeeeecCCc-eEEEEE--ccc-ceeeEeeccchh
Confidence 66444 356666665543 112222 1222334789999999988655543 234444 222 012234444433
Q ss_pred c-------eEEeeeecCCEEEEEe
Q 004866 263 L-------AHCIVEHHEGFLYLFT 279 (726)
Q Consensus 263 ~-------~~~~~~~~g~~l~~~t 279 (726)
. ....|+|||.+|....
T Consensus 215 ~~~~~T~f~RlSWSPDG~~las~n 238 (942)
T KOG0973|consen 215 ESPLTTFFLRLSWSPDGHHLASPN 238 (942)
T ss_pred hCCCcceeeecccCCCcCeecchh
Confidence 1 1346789998776543
No 250
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=96.77 E-value=0.33 Score=52.06 Aligned_cols=254 Identities=14% Similarity=0.120 Sum_probs=128.2
Q ss_pred eeceeeCCCCCEEE-EEEe-----CCCCcEEEEEEEECCCCceecccc-----ccccceeEEecCCCEEEEEEecCCCCC
Q 004866 124 EELSEVSPDHKFLA-YTMY-----DKDNDYFTLSVRNLNSGALCSKPQ-----AVRVSNIAWAKDGQALIYVVTDQNKRP 192 (726)
Q Consensus 124 ~~~~~~SPDG~~la-~~~~-----~~g~e~~~l~v~dl~tg~~~~~~~-----~~~~~~~~WspDg~~l~y~~~~~~~~~ 192 (726)
+..+.+||..+||+ |+.. ...+|.-+|.|||+.||....... .....-+.||.|+++++-...+
T Consensus 252 Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~----- 326 (698)
T KOG2314|consen 252 VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN----- 326 (698)
T ss_pred ceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccc-----
Confidence 44557899999876 3321 122355789999999998665321 1234568999999977654321
Q ss_pred ceEEEEEcCCCCceeEEeeecC--CceEEEEEEcCCCcEEEEEEcCCCc--eEEEEEeCCCCCCCeE--EeeccCCceEE
Q 004866 193 YQIYCSIIGSTDEDALLLEESN--ENVYVNIRHTKDFHFVCVHTFSTTS--SKVFLINAADPFSGLT--LIWECEGLAHC 266 (726)
Q Consensus 193 ~~l~~~~l~t~~~~~lv~~~~d--~~~~~~~~~s~Dg~~l~~~~~~~~~--~~l~~~d~~~~~~~~~--~l~~~~~~~~~ 266 (726)
.|-++...+ -.+++... ..-.-+.+|||-+..|++-+..... .++-++.+-+.. .++ .+. ...++..
T Consensus 327 -sisIyEtps----f~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~-~iRt~nlf-nVsDckL 399 (698)
T KOG2314|consen 327 -SISIYETPS----FMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR-EIRTKNLF-NVSDCKL 399 (698)
T ss_pred -eEEEEecCc----eeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc-eeeeccce-eeeccEE
Confidence 233333211 01111000 0001145899999999887654432 456666654421 111 111 1223455
Q ss_pred eeeecCCEEEEEecCcccC---CCCCCeEEEEeeCCCCCCCCCceEEeecCCCceE-EEEeeeCCEEEEEEEeCCeeEEE
Q 004866 267 IVEHHEGFLYLFTDAAKEG---QEADNHYLLRCPVDASFPSRTWESVFIDDQGLVV-EDVDFCKTHMALILREGRTYRLC 342 (726)
Q Consensus 267 ~~~~~g~~l~~~t~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l-~~~~~~~~~lv~~~~~~g~~~l~ 342 (726)
.|-..|+.|.+.+++.... ..-.|+.|++++-. +. ...+++-. +..| -++.+.+++..+.........+.
T Consensus 400 hWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireK-dI----pve~velk-e~vi~FaWEP~gdkF~vi~g~~~k~tvs 473 (698)
T KOG2314|consen 400 HWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREK-DI----PVEVVELK-ESVIAFAWEPHGDKFAVISGNTVKNTVS 473 (698)
T ss_pred EeccCCcEEEEEEEeeccccccceEeeEEEEEeecc-CC----Cceeeecc-hheeeeeeccCCCeEEEEEcccccccee
Confidence 6667899998888753211 12236777777643 11 11222221 2222 23444566655555544455555
Q ss_pred EEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCC
Q 004866 343 SVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSY 407 (726)
Q Consensus 343 ~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~ 407 (726)
.+.+.+...+ . .....++...+. ...+++.+..+++..-. .+-+.++-||+.-
T Consensus 474 fY~~e~~~~~----~----~lVk~~dk~~~N---~vfwsPkG~fvvva~l~-s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 474 FYAVETNIKK----P----SLVKELDKKFAN---TVFWSPKGRFVVVAALV-SRRGDLEFYDTDY 526 (698)
T ss_pred EEEeecCCCc----h----hhhhhhcccccc---eEEEcCCCcEEEEEEec-ccccceEEEecch
Confidence 5554422111 0 012234443221 12345666655443211 2667888888753
No 251
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=96.75 E-value=0.028 Score=57.87 Aligned_cols=191 Identities=13% Similarity=0.014 Sum_probs=105.9
Q ss_pred EEeeceeeCCC--CCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 122 AYEELSEVSPD--HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 122 ~~~~~~~~SPD--G~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
..++++.|+|. +.-||-. ..+| .+.+|++++..++.... ...++.++|.|+|+.|.-+.+|.+++ |
T Consensus 218 ~~v~~~~fhP~~~~~~lat~-s~Dg----tvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWR---l-- 287 (459)
T KOG0272|consen 218 SRVGAAVFHPVDSDLNLATA-SADG----TVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWR---L-- 287 (459)
T ss_pred cceeeEEEccCCCccceeee-ccCC----ceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchh---h--
Confidence 36888899998 4456544 3455 38899998866655322 44788999999999998888887653 3
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCc--eEEeeeecCCEE
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL--AHCIVEHHEGFL 275 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~--~~~~~~~~g~~l 275 (726)
+|+.++. .+++.|....-..+++|.+||.-++ +.. -.+--.++|+.++. -..+...--+ ....++|.|-++
T Consensus 288 WD~~tk~--ElL~QEGHs~~v~~iaf~~DGSL~~-tGG--lD~~~RvWDlRtgr--~im~L~gH~k~I~~V~fsPNGy~l 360 (459)
T KOG0272|consen 288 WDLETKS--ELLLQEGHSKGVFSIAFQPDGSLAA-TGG--LDSLGRVWDLRTGR--CIMFLAGHIKEILSVAFSPNGYHL 360 (459)
T ss_pred cccccch--hhHhhcccccccceeEecCCCceee-ccC--ccchhheeecccCc--EEEEecccccceeeEeECCCceEE
Confidence 4666653 3444444433334689999998654 222 12223445776642 2222222212 223456766544
Q ss_pred EEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEE--EeeeCCEEEEEEEeCCeeEEEE
Q 004866 276 YLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVED--VDFCKTHMALILREGRTYRLCS 343 (726)
Q Consensus 276 ~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~--~~~~~~~lv~~~~~~g~~~l~~ 343 (726)
+--+. +. ..+|+.+... .. .-++|.. ...+.. +.+..++.+++...+...+|+.
T Consensus 361 ATgs~-Dn------t~kVWDLR~r-----~~-ly~ipAH-~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs 416 (459)
T KOG0272|consen 361 ATGSS-DN------TCKVWDLRMR-----SE-LYTIPAH-SNLVSQVKYSPQEGYFLVTASYDNTVKIWS 416 (459)
T ss_pred eecCC-CC------cEEEeeeccc-----cc-ceecccc-cchhhheEecccCCeEEEEcccCcceeeec
Confidence 32221 11 2455554432 11 1123322 122333 3333567777777777776654
No 252
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=96.67 E-value=0.054 Score=52.99 Aligned_cols=99 Identities=16% Similarity=0.128 Sum_probs=65.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+....+||||...|+. ++.-.+++|||+.++.+.... ...+.+++|+|.-=+|.-.. . ..|.++++.
T Consensus 194 ~v~t~~vSpDGslcasG-----gkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~at-~-----~sIkIwdl~ 262 (315)
T KOG0279|consen 194 YVNTVTVSPDGSLCASG-----GKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCAAT-A-----TSIKIWDLE 262 (315)
T ss_pred cEEEEEECCCCCEEecC-----CCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEeecc-C-----CceEEEecc
Confidence 46677899999999883 333468999999998765322 44678899999865554432 1 236667776
Q ss_pred CCC-ceeEEeee------cCCceEEEEEEcCCCcEEEE
Q 004866 202 STD-EDALLLEE------SNENVYVNIRHTKDFHFVCV 232 (726)
Q Consensus 202 t~~-~~~lv~~~------~d~~~~~~~~~s~Dg~~l~~ 232 (726)
++. .+.+-.+. ...+..++++||+||..|+-
T Consensus 263 ~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~ 300 (315)
T KOG0279|consen 263 SKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFA 300 (315)
T ss_pred chhhhhhccccccccccccCCcEEEEEEEcCCCcEEEe
Confidence 654 22221111 12345678999999999863
No 253
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=96.67 E-value=0.035 Score=63.75 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=72.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+.++.||||+.+||-.. .+ ..|.|||..+.+.+.... ...+.++.|.|=|++|+-...| +.-+||+ +
T Consensus 131 DV~Dv~Wsp~~~~lvS~s-~D----nsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdD---rtikvwr--t 200 (942)
T KOG0973|consen 131 DVLDVNWSPDDSLLVSVS-LD----NSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDD---RTLKVWR--T 200 (942)
T ss_pred ccceeccCCCccEEEEec-cc----ceEEEEccccceeeeeeecccccccceEECCccCeeeeecCC---ceEEEEE--c
Confidence 577889999999987653 22 358999999986555433 3457789999999988776443 3345555 3
Q ss_pred CCCCceeEE---ee-ecCCceEEEEEEcCCCcEEEEEEc-CCCceEEEEEeC
Q 004866 201 GSTDEDALL---LE-ESNENVYVNIRHTKDFHFVCVHTF-STTSSKVFLINA 247 (726)
Q Consensus 201 ~t~~~~~lv---~~-~~d~~~~~~~~~s~Dg~~l~~~~~-~~~~~~l~~~d~ 247 (726)
.+-+....+ |+ .+...+|..++|||||+||+.... .+..+-+-+++-
T Consensus 201 ~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR 252 (942)
T KOG0973|consen 201 SDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIER 252 (942)
T ss_pred ccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEec
Confidence 221111112 22 223457788999999999975432 223333444443
No 254
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.65 E-value=0.011 Score=55.88 Aligned_cols=105 Identities=16% Similarity=0.143 Sum_probs=74.7
Q ss_pred EEEEEcCCCCCCC--CccchHHHHHHHHCCcEEEEEccCCCC-CCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 496 GLLHGHGAYGELL--DKRWRSELKSLLDRGWVVAFADVRGGG-GGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 496 ~vl~~hGg~~~~~--~~~~~~~~~~l~~~G~~v~~~d~RG~g-~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
.||++ ||-+... .+.-.+...+|.+.+|..+.+..|-+- +||.- .-..+.+|+..++++++-.++.
T Consensus 38 ~vvfi-GGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~--------slk~D~edl~~l~~Hi~~~~fS-- 106 (299)
T KOG4840|consen 38 KVVFI-GGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTF--------SLKDDVEDLKCLLEHIQLCGFS-- 106 (299)
T ss_pred EEEEE-cccCCCccccccHHHHHHHHhhccceeeeeeccccccccccc--------cccccHHHHHHHHHHhhccCcc--
Confidence 45555 4444332 222345567888899999999988654 34322 1124789999999988876654
Q ss_pred CcEEEEEecccHHHHHHHHHc--CCCceeEEEEeCCccccc
Q 004866 573 HKLAGWGYSAGGLLVAAAINC--CPDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~--~p~~f~a~v~~~p~~d~~ 611 (726)
..|.++|||-|.-=.+..+++ .|..++|+|+++|+.|..
T Consensus 107 t~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 107 TDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 499999999999777777743 356789999999999865
No 255
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=96.62 E-value=0.38 Score=53.24 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=80.8
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc--eecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA--LCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~--~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
.+....+||||+.++.+. ..+ .+.++++.+++ ...... ...+..+.|||||+.|+=.. + ...|+++
T Consensus 161 sv~~~~fs~~g~~l~~~~-~~~----~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s-~----D~tiriw 230 (456)
T KOG0266|consen 161 SVTCVDFSPDGRALAAAS-SDG----LIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGS-D----DKTLRIW 230 (456)
T ss_pred ceEEEEEcCCCCeEEEcc-CCC----cEEEeecccccchhhccccccccceeeeEECCCCcEEEEec-C----CceEEEe
Confidence 345578999999988874 333 37888887666 222211 33568899999999554332 2 2478888
Q ss_pred EcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe-EEeeccCCceE-EeeeecCCEEE
Q 004866 199 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL-TLIWECEGLAH-CIVEHHEGFLY 276 (726)
Q Consensus 199 ~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~-~~l~~~~~~~~-~~~~~~g~~l~ 276 (726)
++.....-..++. ....+...+.++|+|+. +++...+. .+.++|+.+ ++. +.+....+.+. ..++++|..|+
T Consensus 231 d~~~~~~~~~~l~-gH~~~v~~~~f~p~g~~-i~Sgs~D~--tvriWd~~~--~~~~~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 231 DLKDDGRNLKTLK-GHSTYVTSVAFSPDGNL-LVSGSDDG--TVRIWDVRT--GECVRKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred eccCCCeEEEEec-CCCCceEEEEecCCCCE-EEEecCCC--cEEEEeccC--CeEEEeeeccCCceEEEEECCCCCEEE
Confidence 8833322222332 22233456889999954 44444333 466677776 333 33444444433 34556666554
Q ss_pred EE
Q 004866 277 LF 278 (726)
Q Consensus 277 ~~ 278 (726)
..
T Consensus 305 s~ 306 (456)
T KOG0266|consen 305 SA 306 (456)
T ss_pred Ec
Confidence 44
No 256
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.61 E-value=0.0015 Score=58.78 Aligned_cols=53 Identities=25% Similarity=0.302 Sum_probs=44.5
Q ss_pred HHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccccc
Q 004866 559 SCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNT 613 (726)
Q Consensus 559 ~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~ 613 (726)
+--+|++++.. |.+..+.|.||||++++....++|++|..+|+.+|++|...+
T Consensus 89 AyerYv~eEal--pgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardf 141 (227)
T COG4947 89 AYERYVIEEAL--PGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDF 141 (227)
T ss_pred HHHHHHHHhhc--CCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHh
Confidence 44456776543 477889999999999999999999999999999999997643
No 257
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=96.60 E-value=0.018 Score=63.80 Aligned_cols=112 Identities=12% Similarity=0.070 Sum_probs=76.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+...+|.|+..|+|-. +..-++++||+.+|..+++.. ...+..+++||+|++|+-.. ....|.++|+
T Consensus 537 DV~cv~FHPNs~Y~aTG-----SsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~-----ed~~I~iWDl 606 (707)
T KOG0263|consen 537 DVDCVSFHPNSNYVATG-----SSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGD-----EDGLIKIWDL 606 (707)
T ss_pred ccceEEECCcccccccC-----CCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecc-----cCCcEEEEEc
Confidence 45567899999988654 223469999999998877643 44678899999999886542 2346888999
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+++..-....+..+. ..++++|.||..|+... ..+.|.++|+..
T Consensus 607 ~~~~~v~~l~~Ht~t--i~SlsFS~dg~vLasgg---~DnsV~lWD~~~ 650 (707)
T KOG0263|consen 607 ANGSLVKQLKGHTGT--IYSLSFSRDGNVLASGG---ADNSVRLWDLTK 650 (707)
T ss_pred CCCcchhhhhcccCc--eeEEEEecCCCEEEecC---CCCeEEEEEchh
Confidence 887521112222222 23678899999886433 345666778754
No 258
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.56 E-value=0.074 Score=53.43 Aligned_cols=233 Identities=15% Similarity=0.159 Sum_probs=111.0
Q ss_pred EECCCCcEEEEEEEEcCCCCCCCCccEEEEEcC-CCCCC--CCccchHHHHHHHHCCcEEEEEccCCCCCCCCccccccc
Q 004866 470 VPSHDGISVPLTIIYSPKYKKENQNPGLLHGHG-AYGEL--LDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGR 546 (726)
Q Consensus 470 ~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hG-g~~~~--~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~ 546 (726)
+++.-| .|++++. + .++++.|+||-.|- |.... ...-|...........++++=+|.+|+.+-...+-
T Consensus 4 v~t~~G-~v~V~v~---G-~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p---- 74 (283)
T PF03096_consen 4 VETPYG-SVHVTVQ---G-DPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLP---- 74 (283)
T ss_dssp EEETTE-EEEEEEE---S-S--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT---------
T ss_pred eccCce-EEEEEEE---e-cCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCccccc----
Confidence 445556 5666553 2 23346899999997 32211 11112222333444569999999999986322222
Q ss_pred ccCCCCcHHHHHHHHHHHHHc-CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccc-------c---
Q 004866 547 RTKKLNSIKDFISCARFLIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTL-------L--- 615 (726)
Q Consensus 547 ~~~~~~~~~D~~~~~~~l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~-------~--- 615 (726)
......+++++.+.+..++++ +. +.+..+|--+|+++-+..|..+|+++.+.|+..|...-..++ .
T Consensus 75 ~~y~yPsmd~LAe~l~~Vl~~f~l---k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~ 151 (283)
T PF03096_consen 75 EGYQYPSMDQLAEMLPEVLDHFGL---KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWL 151 (283)
T ss_dssp TT-----HHHHHCTHHHHHHHHT------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH---
T ss_pred ccccccCHHHHHHHHHHHHHhCCc---cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccc
Confidence 122234667766655555544 32 678999999999999999999999999999988865432211 0
Q ss_pred --CCCCCCChhhh---cccCCCC---ChhH--------------------HHHHHhcCcccccccCCCCCeEEEEecCCC
Q 004866 616 --YPILPLIAADY---EEFGYPG---DIDD--------------------FHAIRNYSPYDNIQKDVLYPAVLVTSSFNT 667 (726)
Q Consensus 616 --~~~~~~~~~~~---~~~g~~~---~~~~--------------------~~~~~~~sp~~~i~~~~~~P~lli~g~~D~ 667 (726)
.....-....+ ..||... +.+. .+.+.++..+....+...+|+|+++|..-+
T Consensus 152 L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp 231 (283)
T PF03096_consen 152 LYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSP 231 (283)
T ss_dssp ----CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTST
T ss_pred ccccccccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCc
Confidence 00000000011 1122110 0011 111222233332223367899999998877
Q ss_pred CcChHHHHHHHHHHHhcCCCCCCCcEEE-EcCCCCCCCchhhHHHHHHHHHHHHHHhh
Q 004866 668 RFGVWEAAKWVARVRESTIYDPKRPILL-NLTTDIVEENRYLQCKESALETAFLIKMM 724 (726)
Q Consensus 668 ~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~gH~~~~~~~~~~~~~~~~~fl~~~l 724 (726)
...++.++..+|-..+ .-++ ..++|= .-..++-..++..+..+.+=+
T Consensus 232 --~~~~vv~~ns~Ldp~~------ttllkv~dcGg--lV~eEqP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 232 --HVDDVVEMNSKLDPTK------TTLLKVADCGG--LVLEEQPGKLAEAFKLFLQGM 279 (283)
T ss_dssp --THHHHHHHHHHS-CCC------EEEEEETT-TT---HHHH-HHHHHHHHHHHHHHT
T ss_pred --chhhHHHHHhhcCccc------ceEEEecccCC--cccccCcHHHHHHHHHHHccC
Confidence 4467888999986543 3344 556543 223344455555555554443
No 259
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=96.55 E-value=0.017 Score=62.98 Aligned_cols=118 Identities=14% Similarity=0.164 Sum_probs=71.7
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-ccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
+.+..+..||+|+.||-+.....-+...|++++..+=.... +.. .-.+..++|||||++|+-...|+. ..|| .
T Consensus 526 yEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt---~sl~--~ 600 (764)
T KOG1063|consen 526 YEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRT---VSLY--E 600 (764)
T ss_pred eeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCce---EEee--e
Confidence 57888999999999998766556677889999976643333 111 225678999999999987765543 2333 3
Q ss_pred cCCCCceeEEe--eecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE
Q 004866 200 IGSTDEDALLL--EESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI 245 (726)
Q Consensus 200 l~t~~~~~lv~--~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 245 (726)
......+..-| .....+..-+..|+||+++ +++++++-.-.+|..
T Consensus 601 ~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~-FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 601 VQEDIKDEFRFACLKAHTRIIWDCSWSPDEKY-FATASRDKKVKVWEE 647 (764)
T ss_pred eecccchhhhhccccccceEEEEcccCcccce-eEEecCCceEEEEec
Confidence 22211111111 1112223346789999999 344444434444544
No 260
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.52 E-value=0.033 Score=52.26 Aligned_cols=108 Identities=18% Similarity=0.151 Sum_probs=66.8
Q ss_pred EEEEcCCCCCCCCccEEEEEcCCCCCCCCccc---------------hHHHHHHHHCCcEEEEEccCCCCCCCCcccccc
Q 004866 481 TIIYSPKYKKENQNPGLLHGHGAYGELLDKRW---------------RSELKSLLDRGWVVAFADVRGGGGGGKKWHHDG 545 (726)
Q Consensus 481 ~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~---------------~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~ 545 (726)
+|+..++. ...+..++|.+||+--. -...| -+.+..-.+.||-|++.|.-- .+.|++.-
T Consensus 89 FiF~s~~~-lt~~~kLlVLIHGSGvV-rAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~----~~kfye~k 162 (297)
T KOG3967|consen 89 FIFMSEDA-LTNPQKLLVLIHGSGVV-RAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNR----ERKFYEKK 162 (297)
T ss_pred eEEEChhH-hcCccceEEEEecCceE-ecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCch----hhhhhhcc
Confidence 34554443 23445689999995211 01111 244566667899999988652 22344321
Q ss_pred ccc--CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCC
Q 004866 546 RRT--KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD 596 (726)
Q Consensus 546 ~~~--~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~ 596 (726)
... .-...++-+...-.+++. ...+..++++-||+||++++-++.+.|+
T Consensus 163 ~np~kyirt~veh~~yvw~~~v~--pa~~~sv~vvahsyGG~~t~~l~~~f~~ 213 (297)
T KOG3967|consen 163 RNPQKYIRTPVEHAKYVWKNIVL--PAKAESVFVVAHSYGGSLTLDLVERFPD 213 (297)
T ss_pred cCcchhccchHHHHHHHHHHHhc--ccCcceEEEEEeccCChhHHHHHHhcCC
Confidence 111 122456666666666663 3467899999999999999999999886
No 261
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.49 E-value=0.79 Score=54.79 Aligned_cols=195 Identities=11% Similarity=0.012 Sum_probs=98.7
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc----ee--c---cccccccceeEEecCCCEEEEEEecCCCCCc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA----LC--S---KPQAVRVSNIAWAKDGQALIYVVTDQNKRPY 193 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~----~~--~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 193 (726)
.+..++|||||++||-+. .+| .|.|||+.+.. .. + .........+.|+|....++.+... ..
T Consensus 485 ~V~~i~fs~dg~~latgg-~D~----~I~iwd~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~----Dg 555 (793)
T PLN00181 485 LVCAIGFDRDGEFFATAG-VNK----KIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNF----EG 555 (793)
T ss_pred cEEEEEECCCCCEEEEEe-CCC----EEEEEECCcccccccccccceEEecccCceeeEEeccCCCCEEEEEeC----CC
Confidence 356678999999988764 233 48999976421 10 1 1112245678998864333444322 23
Q ss_pred eEEEEEcCCCCceeEEeeecCCceEEEEEEcC-CCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeee-ec
Q 004866 194 QIYCSIIGSTDEDALLLEESNENVYVNIRHTK-DFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVE-HH 271 (726)
Q Consensus 194 ~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~-~~ 271 (726)
.|.++|+.+++. ...+..... ....+.|+| |+..|+..+.+ ..|.++|+.++. ....+..........+. ++
T Consensus 556 ~v~lWd~~~~~~-~~~~~~H~~-~V~~l~~~p~~~~~L~Sgs~D---g~v~iWd~~~~~-~~~~~~~~~~v~~v~~~~~~ 629 (793)
T PLN00181 556 VVQVWDVARSQL-VTEMKEHEK-RVWSIDYSSADPTLLASGSDD---GSVKLWSINQGV-SIGTIKTKANICCVQFPSES 629 (793)
T ss_pred eEEEEECCCCeE-EEEecCCCC-CEEEEEEcCCCCCEEEEEcCC---CEEEEEECCCCc-EEEEEecCCCeEEEEEeCCC
Confidence 688888876542 222322222 234678886 67766544432 357888887632 22223222111122232 34
Q ss_pred CCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 272 EGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 272 g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
|..|+.. ..+ ..|..+|+. ... .....+..+ ...+..+.+.....+++...++. |.++|+.
T Consensus 630 g~~latg-s~d--------g~I~iwD~~-~~~-~~~~~~~~h--~~~V~~v~f~~~~~lvs~s~D~~--ikiWd~~ 690 (793)
T PLN00181 630 GRSLAFG-SAD--------HKVYYYDLR-NPK-LPLCTMIGH--SKTVSYVRFVDSSTLVSSSTDNT--LKLWDLS 690 (793)
T ss_pred CCEEEEE-eCC--------CeEEEEECC-CCC-ccceEecCC--CCCEEEEEEeCCCEEEEEECCCE--EEEEeCC
Confidence 5444433 322 235555554 211 112222222 23455565555556666666665 5556654
No 262
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=96.49 E-value=0.22 Score=52.79 Aligned_cols=141 Identities=14% Similarity=0.246 Sum_probs=92.5
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeEEecCC--CEEEEEEecCCCCCceEEEEEc
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDG--QALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg--~~l~y~~~~~~~~~~~l~~~~l 200 (726)
++||-|.+++|+.+ |+ .|+|.++ |+..-+... ...+..+.|||-| ..|+|-.-...+.+.++..+.|
T Consensus 137 ~k~s~~D~y~ARvv---~~---sl~i~e~-t~n~~~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sI 209 (561)
T COG5354 137 LKFSIDDKYVARVV---GS---SLYIHEI-TDNIEEHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSI 209 (561)
T ss_pred eeeeecchhhhhhc---cC---eEEEEec-CCccccCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEc
Confidence 47999999999985 32 4899998 554433222 3577889999964 4577765555667777777777
Q ss_pred CCCC--ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC--------ceEEEEEeCCCCCCCeEEeeccCC-ceEEeee
Q 004866 201 GSTD--EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT--------SSKVFLINAADPFSGLTLIWECEG-LAHCIVE 269 (726)
Q Consensus 201 ~t~~--~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~--------~~~l~~~d~~~~~~~~~~l~~~~~-~~~~~~~ 269 (726)
..+. ...-++...+ +.+.|.+.|++|++....+. .+.||++++.. ..........+ .+.+.|+
T Consensus 210 p~~s~l~tk~lfk~~~----~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e--~~i~V~~~~~~pVhdf~W~ 283 (561)
T COG5354 210 PKNSVLVTKNLFKVSG----VQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITE--RSIPVEKDLKDPVHDFTWE 283 (561)
T ss_pred cCCCeeeeeeeEeecc----cEEEEecCCceEEEEEEEeeecccceeccceEEEEeecc--cccceeccccccceeeeec
Confidence 6443 2222333222 46789999999988654332 37899999875 22222223233 3457788
Q ss_pred ecCCEEEEEec
Q 004866 270 HHEGFLYLFTD 280 (726)
Q Consensus 270 ~~g~~l~~~t~ 280 (726)
|+++.|.+++.
T Consensus 284 p~S~~F~vi~g 294 (561)
T COG5354 284 PLSSRFAVISG 294 (561)
T ss_pred ccCCceeEEec
Confidence 99999999884
No 263
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.46 E-value=2.1 Score=47.79 Aligned_cols=221 Identities=14% Similarity=0.153 Sum_probs=124.3
Q ss_pred cceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC--ceEEEEEe
Q 004866 169 VSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT--SSKVFLIN 246 (726)
Q Consensus 169 ~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~--~~~l~~~d 246 (726)
.+.++-|||++.++|.-.....+.+.|...++.+++.- -++-.. ...++.|.+|++.++++..... ..+||...
T Consensus 131 Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~---~d~i~~-~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~ 206 (682)
T COG1770 131 LGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEEL---PDEITN-TSGSFAWAADGKTLFYTRLDENHRPDKVWRHR 206 (682)
T ss_pred eeeeeeCCCCceEEEEEecccccEEEEEEEeccccccc---chhhcc-cccceEEecCCCeEEEEEEcCCCCcceEEEEe
Confidence 46678999999999987666667788999999887511 011111 1235689999999999886554 47899999
Q ss_pred CCCCCCCeEEeeccCCc-eEEee--eecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEe
Q 004866 247 AADPFSGLTLIWECEGL-AHCIV--EHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVD 323 (726)
Q Consensus 247 ~~~~~~~~~~l~~~~~~-~~~~~--~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~ 323 (726)
+.++...-+.|....+. ....+ +..+..+++..+... ...+..++.+ .++ ..++.+.+...+... .++
T Consensus 207 ~gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~------tsE~~ll~a~-~p~-~~p~vv~pr~~g~eY-~~e 277 (682)
T COG1770 207 LGTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHI------TSEVRLLDAD-DPE-AEPKVVLPRENGVEY-SVE 277 (682)
T ss_pred cCCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCc------ceeEEEEecC-CCC-CceEEEEEcCCCcEE-eee
Confidence 98754444445544333 22222 233444555443221 2456666665 443 456666655444433 344
Q ss_pred eeCCEEEEEEEeCCe-eEEEEEecCCCCCCcceeecccccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEE
Q 004866 324 FCKTHMALILREGRT-YRLCSVSLPLPAGKGVVHLKELHPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVD 402 (726)
Q Consensus 324 ~~~~~lv~~~~~~g~-~~l~~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~ 402 (726)
-.+++.++..+.+|. ..|....+. . .+..|+ . .++-+... .+. + .+.-.+.+++....-.. +.++.
T Consensus 278 h~~d~f~i~sN~~gknf~l~~ap~~-~-~~~~w~--~----~I~h~~~~-~l~-~--~~~f~~~lVl~eR~~gl-p~v~v 344 (682)
T COG1770 278 HGGDRFYILSNADGKNFKLVRAPVS-A-DKSNWR--E----LIPHREDV-RLE-G--VDLFADHLVLLERQEGL-PRVVV 344 (682)
T ss_pred ecCcEEEEEecCCCcceEEEEccCC-C-ChhcCe--e----eeccCCCc-eee-e--eeeeccEEEEEecccCC-ceEEE
Confidence 457888888898883 356655541 1 111121 1 12222221 111 1 12223445555544333 46666
Q ss_pred EECCCCeEEEEEe
Q 004866 403 YDLSYGKWNIIQQ 415 (726)
Q Consensus 403 ~d~~~~~~~~~~~ 415 (726)
.+.++++...+.-
T Consensus 345 ~~~~~~~~~~i~f 357 (682)
T COG1770 345 RDRKTGEERGIAF 357 (682)
T ss_pred EecCCCceeeEEe
Confidence 7777777665543
No 264
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=96.44 E-value=0.37 Score=52.30 Aligned_cols=139 Identities=14% Similarity=0.111 Sum_probs=85.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+..+.|||||++||.... .| .+.|+|.++.+.+.... ...++.++|. +. ++-+- .+...|..+|
T Consensus 219 ~vtSv~ws~~G~~LavG~~-~g----~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~-~lssG----sr~~~I~~~d 286 (484)
T KOG0305|consen 219 LVTSVKWSPDGSHLAVGTS-DG----TVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SS-VLSSG----SRDGKILNHD 286 (484)
T ss_pred ceEEEEECCCCCEEEEeec-CC----eEEEEehhhccccccccCCcCceeEEEecc--Cc-eEEEe----cCCCcEEEEE
Confidence 5667789999999999853 44 48999998876655332 3467889998 22 22221 2344677777
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-EeeeecCCEEEEE
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLF 278 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~ 278 (726)
+...+...-+... ...-..++.|++|+++++ ..+..+.+++.|..... .+..+......+. ..|.|.-..|+..
T Consensus 287 vR~~~~~~~~~~~-H~qeVCgLkws~d~~~lA---SGgnDN~~~Iwd~~~~~-p~~~~~~H~aAVKA~awcP~q~~lLAs 361 (484)
T KOG0305|consen 287 VRISQHVVSTLQG-HRQEVCGLKWSPDGNQLA---SGGNDNVVFIWDGLSPE-PKFTFTEHTAAVKALAWCPWQSGLLAT 361 (484)
T ss_pred Eecchhhhhhhhc-ccceeeeeEECCCCCeec---cCCCccceEeccCCCcc-ccEEEeccceeeeEeeeCCCccCceEE
Confidence 7665421111211 122346889999999986 44456788888885532 3344444444433 3455655555443
No 265
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=96.42 E-value=0.059 Score=58.42 Aligned_cols=167 Identities=15% Similarity=0.058 Sum_probs=92.3
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHH-CC--cEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHH--c
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLD-RG--WVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIE--K 567 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G--~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~--~ 567 (726)
-.|+++..||.+...-...|...++.++. .| .-|..+|++-.-+ +.+-....+-.+...++.+. .
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~ig----------G~nI~h~ae~~vSf~r~kvlei~ 244 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIG----------GANIKHAAEYSVSFDRYKVLEIT 244 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCC----------CcchHHHHHHHHHHhhhhhhhhh
Confidence 35889999998732222334444433333 33 3344455552111 01111122333333332222 2
Q ss_pred CCCCCCcEEEEEecccHHHHHHHHHcCCCce-eEEEEeCCcccccccccCCCCCCChhhhcccCCCCChhHHHHHHhcCc
Q 004866 568 EIVKEHKLAGWGYSAGGLLVAAAINCCPDLF-RAVVLEVPFLDATNTLLYPILPLIAADYEEFGYPGDIDDFHAIRNYSP 646 (726)
Q Consensus 568 ~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f-~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp 646 (726)
+..-...|.++|+|||..++..+.....|.+ .|+||. ++.+.. ...+ -|.+++ . +
T Consensus 245 gefpha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCi-gypl~~-----vdgp--------rgirDE--~---L----- 300 (784)
T KOG3253|consen 245 GEFPHAPIILVGRSMGALVACHVSPSNSDVEVDAVVCI-GYPLDT-----VDGP--------RGIRDE--A---L----- 300 (784)
T ss_pred ccCCCCceEEEecccCceeeEEeccccCCceEEEEEEe-cccccC-----CCcc--------cCCcch--h---h-----
Confidence 3335578999999999877777666555544 444432 221100 0000 033221 1 1
Q ss_pred ccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCC
Q 004866 647 YDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEE 704 (726)
Q Consensus 647 ~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 704 (726)
. ..+.|+|||.|..|.++++...+++.+++++.. ..++ ..+++|.+.
T Consensus 301 ----l-dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~-----elhV-I~~adhsma 347 (784)
T KOG3253|consen 301 ----L-DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEV-----ELHV-IGGADHSMA 347 (784)
T ss_pred ----H-hcCCceEEEecCCcccCCHHHHHHHHHHhhccc-----eEEE-ecCCCcccc
Confidence 1 257799999999999999999999999999864 3333 578999754
No 266
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=96.40 E-value=0.024 Score=61.11 Aligned_cols=116 Identities=18% Similarity=0.151 Sum_probs=72.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc-cc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+..++|.|=-.-+.-+. +...+|.+||+.+++.... .. .+.+.+++|||||+.|+-...| ..|+.|+-
T Consensus 679 KI~slRfHPLAadvLa~a----syd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKD-----g~~rVy~P 749 (1012)
T KOG1445|consen 679 KITSLRFHPLAADVLAVA----SYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKD-----GTLRVYEP 749 (1012)
T ss_pred eEEEEEecchhhhHhhhh----hccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecC-----ceEEEeCC
Confidence 466678888433322221 2246799999999865432 22 4577899999999999877544 35777766
Q ss_pred CCCCceeEEeeecCC--ceEEEEEEcCCCcEEEEEEcCCC-ceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESNE--NVYVNIRHTKDFHFVCVHTFSTT-SSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~--~~~~~~~~s~Dg~~l~~~~~~~~-~~~l~~~d~~~ 249 (726)
.+.++ -+++.+.. .--..+.|.=||++|++..-.+. ..+|-++|..+
T Consensus 750 rs~e~--pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 750 RSREQ--PVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred CCCCC--ccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 55432 24443321 11234678889999988765443 35677777655
No 267
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=96.37 E-value=0.62 Score=47.44 Aligned_cols=59 Identities=19% Similarity=0.196 Sum_probs=39.9
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCC-ceecccccc--ccceeEEecCCCEEEEE
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG-ALCSKPQAV--RVSNIAWAKDGQALIYV 184 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg-~~~~~~~~~--~~~~~~WspDg~~l~y~ 184 (726)
--.|||||++|.-+.+.-.+.+-.|-|+|.+.+ +.+...... .-..+.|.|||++|+..
T Consensus 55 Hg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 55 HGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVA 116 (305)
T ss_pred CEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEE
Confidence 346999999986665544444567999999833 333222222 33568999999999876
No 268
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.37 E-value=0.012 Score=60.76 Aligned_cols=88 Identities=23% Similarity=0.276 Sum_probs=64.6
Q ss_pred HCCcEEEEEccCCCCC---CCCcccccccc---cCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcC
Q 004866 521 DRGWVVAFADVRGGGG---GGKKWHHDGRR---TKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC 594 (726)
Q Consensus 521 ~~G~~v~~~d~RG~g~---~g~~~~~~~~~---~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~ 594 (726)
+.+-.++.+..|-.|+ +|.+=+..... ..-.....|+...+.+|....-.....|.++|+||||+|++|.=..+
T Consensus 109 ~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKY 188 (492)
T KOG2183|consen 109 ELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKY 188 (492)
T ss_pred hhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcC
Confidence 3688899999998775 44441111111 12245688999999999887556678999999999999999999999
Q ss_pred CCceeEEEE-eCCcc
Q 004866 595 PDLFRAVVL-EVPFL 608 (726)
Q Consensus 595 p~~f~a~v~-~~p~~ 608 (726)
|.+..++++ .+|++
T Consensus 189 PHiv~GAlAaSAPvl 203 (492)
T KOG2183|consen 189 PHIVLGALAASAPVL 203 (492)
T ss_pred hhhhhhhhhccCceE
Confidence 998776665 45654
No 269
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=96.35 E-value=0.022 Score=56.57 Aligned_cols=112 Identities=19% Similarity=0.166 Sum_probs=64.3
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCCc--EEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGW--VVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~--~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
+..++|++||- .......-....|....-|+ .++...++..|.. ..|..+. ..-..+..++...++.|.+. .
T Consensus 17 ~~~vlvfVHGy-n~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~-~~Y~~d~--~~a~~s~~~l~~~L~~L~~~--~ 90 (233)
T PF05990_consen 17 DKEVLVFVHGY-NNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSL-LGYFYDR--ESARFSGPALARFLRDLARA--P 90 (233)
T ss_pred CCeEEEEEeCC-CCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCh-hhhhhhh--hhHHHHHHHHHHHHHHHHhc--c
Confidence 45799999974 33322221222233233333 7899999977752 1122111 11123445555566666654 3
Q ss_pred CCCcEEEEEecccHHHHHHHHHcC----C-----CceeEEEEeCCcccc
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCC----P-----DLFRAVVLEVPFLDA 610 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~----p-----~~f~a~v~~~p~~d~ 610 (726)
...+|-|++||||+.+++.++.+. + .+|..+|+.+|=+|.
T Consensus 91 ~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 91 GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 458999999999999999887542 1 245566666665543
No 270
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.31 E-value=0.038 Score=60.50 Aligned_cols=140 Identities=14% Similarity=0.033 Sum_probs=76.7
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccc---------h--------HHHHHHHHCCcEEEEEcc
Q 004866 469 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW---------R--------SELKSLLDRGWVVAFADV 531 (726)
Q Consensus 469 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~---------~--------~~~~~l~~~G~~v~~~d~ 531 (726)
.+....+..+..|++..++ . ....|+||++.||||.+.-... . ..-..|.+. ..++.+|.
T Consensus 17 ~~~~~~~~~lfyw~~~s~~-~-~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~-an~l~iD~ 93 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN-D-PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKF-ANLLFIDQ 93 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS-G-GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGT-SEEEEE--
T ss_pred ecCCCCCcEEEEEEEEeCC-C-CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccc-cceEEEee
Confidence 3444466788877776554 2 3557999999999996521110 0 011234443 67888997
Q ss_pred CCCCCCCCcccccccccCCCCcHHHHHHHHHHH-HHcCCCCCCcEEEEEecccHHHHHHHHH----cC------CCceeE
Q 004866 532 RGGGGGGKKWHHDGRRTKKLNSIKDFISCARFL-IEKEIVKEHKLAGWGYSAGGLLVAAAIN----CC------PDLFRA 600 (726)
Q Consensus 532 RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l-~~~~~~d~~ri~i~G~S~GG~l~~~~~~----~~------p~~f~a 600 (726)
+-+.||...-........-....+|+..+++.+ ...+.....++.|+|.||||..+-.++. +. +=-+++
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 766666443222111111123445555555433 3344455669999999999987655543 22 223899
Q ss_pred EEEeCCccccc
Q 004866 601 VVLEVPFLDAT 611 (726)
Q Consensus 601 ~v~~~p~~d~~ 611 (726)
+++..|++|..
T Consensus 174 i~IGng~~dp~ 184 (415)
T PF00450_consen 174 IAIGNGWIDPR 184 (415)
T ss_dssp EEEESE-SBHH
T ss_pred ceecCcccccc
Confidence 99999998764
No 271
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.30 E-value=0.019 Score=58.55 Aligned_cols=119 Identities=17% Similarity=0.214 Sum_probs=80.8
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHC---------CcEEEEEccCCCCCCCCcccc
Q 004866 473 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDR---------GWVVAFADVRGGGGGGKKWHH 543 (726)
Q Consensus 473 ~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~---------G~~v~~~d~RG~g~~g~~~~~ 543 (726)
-.|.+||...+.|+..+..++.--|+..||.||+. ..|...+..|.+- -|-|++|..+|.|=+
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv--~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwS------ 202 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSV--REFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWS------ 202 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchH--HHHHhhhhhhcCccccCCccceeEEEeccCCCCcccC------
Confidence 46889998878887654444444567889999964 3444555555543 378999999987732
Q ss_pred cccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEE
Q 004866 544 DGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVV 602 (726)
Q Consensus 544 ~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v 602 (726)
++.-..|.+..+-..-..+-+...|+ ++-.|.|+-+|..++..++.-+|+.+.+.=
T Consensus 203 d~~sk~GFn~~a~ArvmrkLMlRLg~---nkffiqGgDwGSiI~snlasLyPenV~GlH 258 (469)
T KOG2565|consen 203 DAPSKTGFNAAATARVMRKLMLRLGY---NKFFIQGGDWGSIIGSNLASLYPENVLGLH 258 (469)
T ss_pred cCCccCCccHHHHHHHHHHHHHHhCc---ceeEeecCchHHHHHHHHHhhcchhhhHhh
Confidence 23333444444433333344455566 789999999999999999999999766543
No 272
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=96.25 E-value=0.21 Score=53.58 Aligned_cols=156 Identities=10% Similarity=0.057 Sum_probs=97.0
Q ss_pred eeeCCCCCEEEEEEeC----CCC---cEEEEEEEECCCCcee--ccccccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 127 SEVSPDHKFLAYTMYD----KDN---DYFTLSVRNLNSGALC--SKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~----~g~---e~~~l~v~dl~tg~~~--~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
+.|.+-|+-|...... .|. ....||+++.. |+.. ++...+-+.++.|+|+|+-|...-- -.+..+-+
T Consensus 223 m~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~-g~s~~V~L~k~GPVhdv~W~~s~~EF~VvyG---fMPAkvti 298 (566)
T KOG2315|consen 223 MKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQ-GESVSVPLLKEGPVHDVTWSPSGREFAVVYG---FMPAKVTI 298 (566)
T ss_pred EEeccCCceEEEEEEEeecCCCccccccceEEEEEec-CceEEEecCCCCCceEEEECCCCCEEEEEEe---cccceEEE
Confidence 4699999987765432 221 13579999998 4433 3444667889999999998877631 34567777
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC--CceEEeeeecCCEE
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFL 275 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~~~~~~~~~g~~l 275 (726)
+++... +++.-+..+.. .+.|+|-|++|++.--..-..++-++|..+. +.|.... +.....|+|||.+|
T Consensus 299 fnlr~~----~v~df~egpRN-~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~----K~i~~~~a~~tt~~eW~PdGe~f 369 (566)
T KOG2315|consen 299 FNLRGK----PVFDFPEGPRN-TAFFNPHGNIILLAGFGNLPGDMEVWDVPNR----KLIAKFKAANTTVFEWSPDGEYF 369 (566)
T ss_pred EcCCCC----EeEeCCCCCcc-ceEECCCCCEEEEeecCCCCCceEEEeccch----hhccccccCCceEEEEcCCCcEE
Confidence 777542 34443333322 3568999999998776554455556676551 2333222 23445788999998
Q ss_pred EEEecCcccCCCCC-CeEEEEee
Q 004866 276 YLFTDAAKEGQEAD-NHYLLRCP 297 (726)
Q Consensus 276 ~~~t~~~~~~~~~~-~~~l~~~~ 297 (726)
+..|..++-. .. .++|+-+.
T Consensus 370 lTATTaPRlr--vdNg~Kiwhyt 390 (566)
T KOG2315|consen 370 LTATTAPRLR--VDNGIKIWHYT 390 (566)
T ss_pred EEEeccccEE--ecCCeEEEEec
Confidence 8888765311 11 15666554
No 273
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=96.25 E-value=0.032 Score=55.26 Aligned_cols=106 Identities=15% Similarity=0.164 Sum_probs=67.6
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
-.+.||.|...||-.+ .+| .|.||.+.||.-+.... ..++..+.||.|+..|+-..+| ..+.+|-+.
T Consensus 267 lci~FSRDsEMlAsGs-qDG----kIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD-----~tvRiHGlK 336 (508)
T KOG0275|consen 267 LCISFSRDSEMLASGS-QDG----KIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFD-----QTVRIHGLK 336 (508)
T ss_pred EEEeecccHHHhhccC-cCC----cEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhccccc-----ceEEEeccc
Confidence 3456889988887664 344 48999999998665322 3467789999999988776544 356777777
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEE
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVF 243 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 243 (726)
+++.-. -|. ....|.....+++||.+|+-.+ ++++-.+|
T Consensus 337 SGK~LK-Efr-GHsSyvn~a~ft~dG~~iisaS-sDgtvkvW 375 (508)
T KOG0275|consen 337 SGKCLK-EFR-GHSSYVNEATFTDDGHHIISAS-SDGTVKVW 375 (508)
T ss_pred cchhHH-Hhc-CccccccceEEcCCCCeEEEec-CCccEEEe
Confidence 765100 111 1223434577899999976444 33333444
No 274
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=96.24 E-value=0.041 Score=54.69 Aligned_cols=112 Identities=17% Similarity=0.201 Sum_probs=64.2
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEEC---CCCceecc---cc----ccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNL---NSGALCSK---PQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl---~tg~~~~~---~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
.++||||+.||...-+. ++.||.+ ..|+...+ .. ...+..++|||++++++-.+.|..+ +||
T Consensus 234 aavSP~GRFia~~gFTp-----DVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~w---riw 305 (420)
T KOG2096|consen 234 AAVSPDGRFIAVSGFTP-----DVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKW---RIW 305 (420)
T ss_pred eeeCCCCcEEEEecCCC-----CceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcE---EEe
Confidence 47999999999875432 3666664 23432221 11 1245678999999999877666543 555
Q ss_pred EEEcCCCC-ceeEEee------ecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 197 CSIIGSTD-EDALLLE------ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 197 ~~~l~t~~-~~~lv~~------~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
-.|+.-.. +|.-+.. .....-.+.+..||.|+.|+++..+ .|.++..+++
T Consensus 306 dtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs----~l~~~~se~g 362 (420)
T KOG2096|consen 306 DTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGS----DLKVFASEDG 362 (420)
T ss_pred eccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCC----ceEEEEcccC
Confidence 44432211 1211111 1111222467889999999876643 4666666653
No 275
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=96.21 E-value=0.11 Score=54.69 Aligned_cols=123 Identities=14% Similarity=0.178 Sum_probs=87.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
+.-+++||--+.+.-+....| .+.+||+.+..+..-.. .....+++|||-...|+.+- +...+|+.+|+
T Consensus 167 vRll~ys~skr~lL~~asd~G----~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsV----G~Dkki~~yD~ 238 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKG----AVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSV----GYDKKINIYDI 238 (673)
T ss_pred EEEeecccccceeeEeeccCC----eEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEe----cccceEEEeec
Confidence 345678999999988876666 58999998765443211 22456789999988887764 23358999999
Q ss_pred CCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC
Q 004866 201 GSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE 261 (726)
Q Consensus 201 ~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 261 (726)
++.. .+.++|+.+ +..++++++|.+|+..... .+|+.+|+.....+++.+....
T Consensus 239 ~s~~s~~~l~y~~P----lstvaf~~~G~~L~aG~s~---G~~i~YD~R~~k~Pv~v~sah~ 293 (673)
T KOG4378|consen 239 RSQASTDRLTYSHP----LSTVAFSECGTYLCAGNSK---GELIAYDMRSTKAPVAVRSAHD 293 (673)
T ss_pred ccccccceeeecCC----cceeeecCCceEEEeecCC---ceEEEEecccCCCCceEeeecc
Confidence 9877 778887643 3457899999999876554 4799999987544444444433
No 276
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=96.19 E-value=0.14 Score=56.02 Aligned_cols=117 Identities=10% Similarity=0.140 Sum_probs=70.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc---cc--ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK---PQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~---~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
.++..++||||++|||+.-. ...||-+..+..-.+.. .. .-....+.++-|+..+++...+ ...+..
T Consensus 384 nIs~~aiSPdg~~Ia~st~~----~~~iy~L~~~~~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~----~~~le~ 455 (691)
T KOG2048|consen 384 NISCAAISPDGNLIAISTVS----RTKIYRLQPDPNVKVINVDDVPLALLDASAISFTIDKNKLFLVSKN----IFSLEE 455 (691)
T ss_pred ceeeeccCCCCCEEEEeecc----ceEEEEeccCcceeEEEeccchhhhccceeeEEEecCceEEEEecc----cceeEE
Confidence 45667899999999998532 13345444443211110 01 1134567899999999998633 235656
Q ss_pred EEcCCCC-ceeEEeeec-CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 198 SIIGSTD-EDALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 198 ~~l~t~~-~~~lv~~~~-d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
..+.++. +...-..+. ..+....+..|+||.||+..+. ...|+.+++++.
T Consensus 456 ~el~~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~t---~g~I~v~nl~~~ 507 (691)
T KOG2048|consen 456 FELETPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIST---RGQIFVYNLETL 507 (691)
T ss_pred EEecCcchhhhhccccccCCCcceeEEEcCCCCEEEEEec---cceEEEEEcccc
Confidence 6665554 221111111 2233345778999999988774 457999999984
No 277
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.15 E-value=0.028 Score=55.81 Aligned_cols=97 Identities=21% Similarity=0.127 Sum_probs=61.5
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcE
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKL 575 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri 575 (726)
.|+++|++-|.. ..|....+.|...++.|..+.++|.+.. .....+++++++..-..+.+- ...++.
T Consensus 2 ~lf~~p~~gG~~--~~y~~la~~l~~~~~~v~~i~~~~~~~~----------~~~~~si~~la~~y~~~I~~~-~~~gp~ 68 (229)
T PF00975_consen 2 PLFCFPPAGGSA--SSYRPLARALPDDVIGVYGIEYPGRGDD----------EPPPDSIEELASRYAEAIRAR-QPEGPY 68 (229)
T ss_dssp EEEEESSTTCSG--GGGHHHHHHHTTTEEEEEEECSTTSCTT----------SHEESSHHHHHHHHHHHHHHH-TSSSSE
T ss_pred eEEEEcCCccCH--HHHHHHHHhCCCCeEEEEEEecCCCCCC----------CCCCCCHHHHHHHHHHHhhhh-CCCCCe
Confidence 578888876633 5677777777666689999999987621 112246666655432222211 112389
Q ss_pred EEEEecccHHHHHHHHHcC---CCceeEEEEeC
Q 004866 576 AGWGYSAGGLLVAAAINCC---PDLFRAVVLEV 605 (726)
Q Consensus 576 ~i~G~S~GG~l~~~~~~~~---p~~f~a~v~~~ 605 (726)
.++|+|+||.++..+|.+- -.....+++..
T Consensus 69 ~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD 101 (229)
T PF00975_consen 69 VLAGWSFGGILAFEMARQLEEAGEEVSRLILID 101 (229)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTT-SESEEEEES
T ss_pred eehccCccHHHHHHHHHHHHHhhhccCceEEec
Confidence 9999999999998887652 22344555444
No 278
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=96.14 E-value=0.0052 Score=64.95 Aligned_cols=57 Identities=19% Similarity=0.273 Sum_probs=43.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYV 184 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~ 184 (726)
.+..+.+||||++||.++ .+| .|+|.|..+.+.+-+.. .+..--++||||||+|+.-
T Consensus 292 ~in~f~FS~DG~~LA~VS-qDG----fLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtG 350 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVS-QDG----FLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTG 350 (636)
T ss_pred cccceeEcCCCceEEEEe-cCc----eEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEec
Confidence 677889999999999985 455 49999998877654432 2344457999999988654
No 279
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=96.11 E-value=0.011 Score=63.31 Aligned_cols=86 Identities=17% Similarity=0.176 Sum_probs=67.1
Q ss_pred ccEEEEEcCC-CCCCCCccchHHHHHHHH-CCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHc----
Q 004866 494 NPGLLHGHGA-YGELLDKRWRSELKSLLD-RGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEK---- 567 (726)
Q Consensus 494 ~P~vl~~hGg-~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~---- 567 (726)
.-+|+|.||| +-.+...+..+....|+. .|+-|+.+||--. .....+...+.+.-+.-|++.+
T Consensus 396 ~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLA-----------PEaPFPRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 396 RSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLA-----------PEAPFPRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred ceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccC-----------CCCCCCcHHHHHHHHHHHHhcCHHHh
Confidence 3489999995 555566677777777876 5999999998743 4445677899999999999976
Q ss_pred CCCCCCcEEEEEecccHHHHHHHH
Q 004866 568 EIVKEHKLAGWGYSAGGLLVAAAI 591 (726)
Q Consensus 568 ~~~d~~ri~i~G~S~GG~l~~~~~ 591 (726)
|+ ..+||++.|.|+||.+.+..+
T Consensus 465 G~-TgEriv~aGDSAGgNL~~~Va 487 (880)
T KOG4388|consen 465 GS-TGERIVLAGDSAGGNLCFTVA 487 (880)
T ss_pred Cc-ccceEEEeccCCCcceeehhH
Confidence 44 458999999999998765544
No 280
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.06 E-value=1.1 Score=45.07 Aligned_cols=120 Identities=14% Similarity=0.077 Sum_probs=64.7
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec--ccc--cc-ccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS--KPQ--AV-RVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~--~~~--~~-~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
.+..++|+|||...++.. +.... ..+.+..+|.... +.. .. .+..+.+||||.++++...+... .+|++
T Consensus 67 ~l~~PS~d~~g~~W~v~~---~~~~~-~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~--~~v~v 140 (253)
T PF10647_consen 67 SLTRPSWDPDGWVWTVDD---GSGGV-RVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGG--GRVYV 140 (253)
T ss_pred ccccccccCCCCEEEEEc---CCCce-EEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCC--CeEEE
Confidence 567889999977554432 22222 2333444444332 222 12 57889999999999998755432 46776
Q ss_pred EEcCCCC---ceeEE--eee--cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 198 SIIGSTD---EDALL--LEE--SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 198 ~~l~t~~---~~~lv--~~~--~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
-.+-... ...+. ..- ....-..++.|+++++.+++.......... ++...+
T Consensus 141 a~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~~~~~~~-~v~~dG 198 (253)
T PF10647_consen 141 AGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVVLGRSAGGPVVR-LVSVDG 198 (253)
T ss_pred EEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEEEeCCCCCceeE-EEEccC
Confidence 6553221 11111 000 101122478999999877666554433222 355444
No 281
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.06 E-value=0.043 Score=58.52 Aligned_cols=115 Identities=19% Similarity=0.143 Sum_probs=77.8
Q ss_pred CccEEEEEcC-CCCCCCCccc----hHHHHHHHH-CCcEEEEEccCCCCCC---CCcccccccccCCCCcHHHHHHHHHH
Q 004866 493 QNPGLLHGHG-AYGELLDKRW----RSELKSLLD-RGWVVAFADVRGGGGG---GKKWHHDGRRTKKLNSIKDFISCARF 563 (726)
Q Consensus 493 ~~P~vl~~hG-g~~~~~~~~~----~~~~~~l~~-~G~~v~~~d~RG~g~~---g~~~~~~~~~~~~~~~~~D~~~~~~~ 563 (726)
..|+.|++-| |+.. ..| ...+..||+ .|-.|+....|-.|.+ +..=....+...-...+.|+...++.
T Consensus 85 ~gPiFLmIGGEgp~~---~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~ 161 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPES---DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKA 161 (514)
T ss_pred CCceEEEEcCCCCCC---CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Confidence 3589999877 3332 222 123445555 6999999999987643 11100011111123457788877777
Q ss_pred HHHc-CCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccc
Q 004866 564 LIEK-EIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDA 610 (726)
Q Consensus 564 l~~~-~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~ 610 (726)
+-.+ +.-++.+...+|+||-|.|++|.=..+|++..++|+.++.+..
T Consensus 162 ~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv~A 209 (514)
T KOG2182|consen 162 MNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPVLA 209 (514)
T ss_pred HHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccceeE
Confidence 7654 4567679999999999999999999999999999888766543
No 282
>PLN00181 protein SPA1-RELATED; Provisional
Probab=96.05 E-value=2.3 Score=50.81 Aligned_cols=111 Identities=12% Similarity=0.052 Sum_probs=67.4
Q ss_pred eeceeeCCC-CCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEec-CCCEEEEEEecCCCCCceEEEEE
Q 004866 124 EELSEVSPD-HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAK-DGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 124 ~~~~~~SPD-G~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~Wsp-Dg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
+..+.|+|. +++||-+ +.+| .|.+||+.+++.+.... ...+..++|+| |+..|+-.. . ...|.+++
T Consensus 535 v~~l~~~~~~~~~las~-~~Dg----~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs-~----Dg~v~iWd 604 (793)
T PLN00181 535 LSGICWNSYIKSQVASS-NFEG----VVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGS-D----DGSVKLWS 604 (793)
T ss_pred eeeEEeccCCCCEEEEE-eCCC----eEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEc-C----CCEEEEEE
Confidence 455678775 5666544 4444 59999999987654322 34567899997 666554442 2 23688888
Q ss_pred cCCCCceeEEeeecCCceEEEEEE-cCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 200 IGSTDEDALLLEESNENVYVNIRH-TKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~-s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
+.++.. ...+.... ....+.| +++|++|+..+.+ ..|+++|+.++
T Consensus 605 ~~~~~~-~~~~~~~~--~v~~v~~~~~~g~~latgs~d---g~I~iwD~~~~ 650 (793)
T PLN00181 605 INQGVS-IGTIKTKA--NICCVQFPSESGRSLAFGSAD---HKVYYYDLRNP 650 (793)
T ss_pred CCCCcE-EEEEecCC--CeEEEEEeCCCCCEEEEEeCC---CeEEEEECCCC
Confidence 876542 11222111 1234556 5678888765543 46889998764
No 283
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=96.03 E-value=0.0089 Score=58.29 Aligned_cols=89 Identities=19% Similarity=0.207 Sum_probs=48.7
Q ss_pred EEEEcCCCCCCCCccchHHHHHHHHCCcE---EEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCC
Q 004866 497 LLHGHGAYGELLDKRWRSELKSLLDRGWV---VAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEH 573 (726)
Q Consensus 497 vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ 573 (726)
||++||-.+ .....|......|.++||. |+..+|-...... ...... ........+.+.++.+. .++-.
T Consensus 4 VVlVHG~~~-~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~--~~~~~~--~~~~~~~~l~~fI~~Vl--~~TGa- 75 (219)
T PF01674_consen 4 VVLVHGTGG-NAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSP--SVQNAH--MSCESAKQLRAFIDAVL--AYTGA- 75 (219)
T ss_dssp EEEE--TTT-TTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHT--HHHHHH--B-HHHHHHHHHHHHHHH--HHHT--
T ss_pred EEEECCCCc-chhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCC--cccccc--cchhhHHHHHHHHHHHH--HhhCC-
Confidence 567787543 2446789999999999999 7999985433210 000000 01112234444444444 34566
Q ss_pred cEEEEEecccHHHHHHHHHc
Q 004866 574 KLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 574 ri~i~G~S~GG~l~~~~~~~ 593 (726)
||=|+|||+||.++-+++..
T Consensus 76 kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 76 KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -EEEEEETCHHHHHHHHHHH
T ss_pred EEEEEEcCCcCHHHHHHHHH
Confidence 99999999999999888764
No 284
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=96.02 E-value=1.2 Score=43.26 Aligned_cols=176 Identities=10% Similarity=0.050 Sum_probs=98.0
Q ss_pred EEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC-ceeEEeeecCCceEEEEEE
Q 004866 147 YFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRH 223 (726)
Q Consensus 147 ~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~~ 223 (726)
..+|++|.+.||.-..... ...+..++-+||++.|+... ...|.++|+.+.. ..+..|+..... ...+.+
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~------~qhvRlyD~~S~np~Pv~t~e~h~kN-VtaVgF 91 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAG------NQHVRLYDLNSNNPNPVATFEGHTKN-VTAVGF 91 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhcc------CCeeEEEEccCCCCCceeEEeccCCc-eEEEEE
Confidence 3579999999998665433 44667899999999887653 2378889998876 456667654332 345778
Q ss_pred cCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCC
Q 004866 224 TKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFP 303 (726)
Q Consensus 224 s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~ 303 (726)
--||++++-.+ .+++ +.++|+..+. ..++......+...+-|.+..=+|..+..+ + |...|+. .
T Consensus 92 ~~dgrWMyTgs-eDgt--~kIWdlR~~~--~qR~~~~~spVn~vvlhpnQteLis~dqsg------~--irvWDl~-~-- 155 (311)
T KOG0315|consen 92 QCDGRWMYTGS-EDGT--VKIWDLRSLS--CQRNYQHNSPVNTVVLHPNQTELISGDQSG------N--IRVWDLG-E-- 155 (311)
T ss_pred eecCeEEEecC-CCce--EEEEeccCcc--cchhccCCCCcceEEecCCcceEEeecCCC------c--EEEEEcc-C--
Confidence 89999986433 3333 4444555421 222222222222223333333344444332 3 4455554 1
Q ss_pred CCCceEEeecCCCceEEEEeeeC-CEEEEEEEeCCeeEEEEEecCC
Q 004866 304 SRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 304 ~~~~~~v~~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
..--..++ ++.+..+..+.+.. +.++...+..| .++++++-.
T Consensus 156 ~~c~~~li-Pe~~~~i~sl~v~~dgsml~a~nnkG--~cyvW~l~~ 198 (311)
T KOG0315|consen 156 NSCTHELI-PEDDTSIQSLTVMPDGSMLAAANNKG--NCYVWRLLN 198 (311)
T ss_pred CccccccC-CCCCcceeeEEEcCCCcEEEEecCCc--cEEEEEccC
Confidence 01113344 44566777766553 33444444444 456666654
No 285
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=95.94 E-value=0.22 Score=52.88 Aligned_cols=149 Identities=17% Similarity=0.096 Sum_probs=84.8
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce-ecccc-------ccccceeEEecCCCEEEEEEecCCCCC
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-CSKPQ-------AVRVSNIAWAKDGQALIYVVTDQNKRP 192 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~-~~~~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~ 192 (726)
.+.+..-.|.|+.+-...+...+| +|++||+..-+. +++.. .......+|++||+.|+-...|. .
T Consensus 268 ia~lt~g~whP~~k~~FlT~s~Dg----tlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DG---S 340 (641)
T KOG0772|consen 268 IAELTCGCWHPDNKEEFLTCSYDG----TLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDG---S 340 (641)
T ss_pred eeeeeccccccCcccceEEecCCC----cEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCC---c
Confidence 456777789999999877766555 489999876532 22211 11346789999999987654432 2
Q ss_pred ceEEEEEcCCCC--ceeEEeeecCC-ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe---EEeeccCCceEE
Q 004866 193 YQIYCSIIGSTD--EDALLLEESNE-NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL---TLIWECEGLAHC 266 (726)
Q Consensus 193 ~~l~~~~l~t~~--~~~lv~~~~d~-~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~---~~l~~~~~~~~~ 266 (726)
-++|- .++-. ....+-..... .-...+.+|+||++|+ +++....|-++||......+ .-|..+.....+
T Consensus 341 IQ~W~--~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~Ll---SRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc 415 (641)
T KOG0772|consen 341 IQIWD--KGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLL---SRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDC 415 (641)
T ss_pred eeeee--cCCcccccceEeeeccCCCCceeEEEeccccchhh---hccCCCceeeeeccccccchhhhcCCCccCCCCcc
Confidence 34443 33222 11222111111 1234688999999997 34444567778886643211 122233334445
Q ss_pred eeeecCCEEEEEecC
Q 004866 267 IVEHHEGFLYLFTDA 281 (726)
Q Consensus 267 ~~~~~g~~l~~~t~~ 281 (726)
.++|+.+.++--+..
T Consensus 416 ~FSPd~kli~TGtS~ 430 (641)
T KOG0772|consen 416 CFSPDDKLILTGTSA 430 (641)
T ss_pred ccCCCceEEEecccc
Confidence 567777655554443
No 286
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.93 E-value=0.059 Score=52.70 Aligned_cols=174 Identities=17% Similarity=0.151 Sum_probs=95.9
Q ss_pred EEEEcCCCCCCCCccEEEEEcCCCCCCCCc--cchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHH
Q 004866 481 TIIYSPKYKKENQNPGLLHGHGAYGELLDK--RWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFI 558 (726)
Q Consensus 481 ~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~--~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~ 558 (726)
|+..|+. + -.||++-||.-....| .|+...+.|+++||+|++.-|.-+= .... . -...+..+.
T Consensus 9 wvl~P~~-----P-~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tf----DH~~--~---A~~~~~~f~ 73 (250)
T PF07082_consen 9 WVLIPPR-----P-KGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTF----DHQA--I---AREVWERFE 73 (250)
T ss_pred EEEeCCC-----C-CEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCC----cHHH--H---HHHHHHHHH
Confidence 6676652 1 2678877764433233 4677789999999999998886321 1000 0 112355667
Q ss_pred HHHHHHHHcCCCCCC--cEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccccccCCCCCCChh----hhcccCCC
Q 004866 559 SCARFLIEKEIVKEH--KLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATNTLLYPILPLIAA----DYEEFGYP 632 (726)
Q Consensus 559 ~~~~~l~~~~~~d~~--ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~----~~~~~g~~ 632 (726)
.|++.|.+.+..++. .+.-+|||+|.-+-+.+....+.--++-|+ ..+-|.. ....+|+... ...|| .|
T Consensus 74 ~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~~r~gnil-iSFNN~~---a~~aIP~~~~l~~~l~~EF-~P 148 (250)
T PF07082_consen 74 RCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDVERAGNIL-ISFNNFP---ADEAIPLLEQLAPALRLEF-TP 148 (250)
T ss_pred HHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccCcccceEE-EecCChH---HHhhCchHhhhccccccCc-cC
Confidence 788888876544433 678899999999888877654332222222 1222211 1233343211 01233 12
Q ss_pred CChhHHHHHHhcCcccccccCCCCCeEEEEecCCCCcChHHHHHHHHHHHhcC
Q 004866 633 GDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSFNTRFGVWEAAKWVARVREST 685 (726)
Q Consensus 633 ~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~ 685 (726)
.-.+....++++- .+.. .+||-=..|.. .|+..+.+.|+.+.
T Consensus 149 sP~ET~~li~~~Y---~~~r-----nLLIkF~~D~i---Dqt~~L~~~L~~r~ 190 (250)
T PF07082_consen 149 SPEETRRLIRESY---QVRR-----NLLIKFNDDDI---DQTDELEQILQQRF 190 (250)
T ss_pred CHHHHHHHHHHhc---CCcc-----ceEEEecCCCc---cchHHHHHHHhhhc
Confidence 2223333343321 2222 46666556654 38899999999864
No 287
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=95.90 E-value=0.4 Score=54.48 Aligned_cols=156 Identities=12% Similarity=-0.036 Sum_probs=89.9
Q ss_pred CCcEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCE
Q 004866 103 KIEQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQA 180 (726)
Q Consensus 103 ~~~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~ 180 (726)
+.++.+|+.- +..+...++|-||+++|..++ .+.|.++++.++....... ...+..+.+.|.+..
T Consensus 86 ~~~~~iL~Rf--------tlp~r~~~v~g~g~~iaagsd-----D~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~f 152 (933)
T KOG1274|consen 86 GEEDTILARF--------TLPIRDLAVSGSGKMIAAGSD-----DTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNF 152 (933)
T ss_pred CCccceeeee--------eccceEEEEecCCcEEEeecC-----ceeEEEEeccccchheeecccCCceeeeeEcCCCCE
Confidence 4555566543 234455679999999998754 3568999988764433322 456778999999998
Q ss_pred EEEEEecCCCCCceEEEEEcCCCC-ceeE--Ee---eecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe
Q 004866 181 LIYVVTDQNKRPYQIYCSIIGSTD-EDAL--LL---EESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL 254 (726)
Q Consensus 181 l~y~~~~~~~~~~~l~~~~l~t~~-~~~l--v~---~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~ 254 (726)
|+....+ ..|+.+++.++. ...+ +. +..+.+....++|+|+|..+++...+ ..|-+++..+.....
T Consensus 153 LAvss~d-----G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d---~~Vkvy~r~~we~~f 224 (933)
T KOG1274|consen 153 LAVSSCD-----GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD---NTVKVYSRKGWELQF 224 (933)
T ss_pred EEEEecC-----ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC---CeEEEEccCCceehe
Confidence 8887544 368888887653 1111 11 11112344578999997666554433 245555555432111
Q ss_pred EEeeccC-Cce-EEeeeecCCEEEEEe
Q 004866 255 TLIWECE-GLA-HCIVEHHEGFLYLFT 279 (726)
Q Consensus 255 ~~l~~~~-~~~-~~~~~~~g~~l~~~t 279 (726)
+...... ... ...|+|.|.+|+-.+
T Consensus 225 ~Lr~~~~ss~~~~~~wsPnG~YiAAs~ 251 (933)
T KOG1274|consen 225 KLRDKLSSSKFSDLQWSPNGKYIAAST 251 (933)
T ss_pred eecccccccceEEEEEcCCCcEEeeec
Confidence 1111111 111 235677777665544
No 288
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=95.89 E-value=0.63 Score=46.53 Aligned_cols=114 Identities=10% Similarity=0.067 Sum_probs=64.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+..+.||+||++|.-++ ++. .+.+||+..|..+.... ...+....|.|-.+..+....-+. .-++.+++
T Consensus 67 pi~sl~WS~dgr~LltsS-~D~----si~lwDl~~gs~l~rirf~spv~~~q~hp~k~n~~va~~~~~----sp~vi~~s 137 (405)
T KOG1273|consen 67 PITSLCWSRDGRKLLTSS-RDW----SIKLWDLLKGSPLKRIRFDSPVWGAQWHPRKRNKCVATIMEE----SPVVIDFS 137 (405)
T ss_pred ceeEEEecCCCCEeeeec-CCc----eeEEEeccCCCceeEEEccCccceeeeccccCCeEEEEEecC----CcEEEEec
Confidence 467789999999997664 333 48899999998654322 334456677776554444332111 23445555
Q ss_pred CCCceeEEeeecCCceEEEE---EEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 202 STDEDALLLEESNENVYVNI---RHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~---~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+... ++-..++....... .+.+-|+||+..... ..+.++|.++
T Consensus 138 ~~~h~-~Lp~d~d~dln~sas~~~fdr~g~yIitGtsK---Gkllv~~a~t 184 (405)
T KOG1273|consen 138 DPKHS-VLPKDDDGDLNSSASHGVFDRRGKYIITGTSK---GKLLVYDAET 184 (405)
T ss_pred CCcee-eccCCCccccccccccccccCCCCEEEEecCc---ceEEEEecch
Confidence 43322 22222222211112 367889998754433 3566777766
No 289
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.79 E-value=0.4 Score=48.02 Aligned_cols=46 Identities=9% Similarity=0.016 Sum_probs=38.2
Q ss_pred CCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE--EcCCCCCCC
Q 004866 654 VLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL--NLTTDIVEE 704 (726)
Q Consensus 654 ~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~gH~~~ 704 (726)
...|.|++....|..|++.+.+++++..++.|. .+.. +.+.+|..-
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~-----~V~~~~f~~S~HV~H 224 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGW-----DVRAEKFEDSPHVAH 224 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCC-----eEEEecCCCCchhhh
Confidence 468999999999999999999999999999884 3433 778888643
No 290
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=95.77 E-value=0.021 Score=38.82 Aligned_cols=31 Identities=19% Similarity=0.529 Sum_probs=20.9
Q ss_pred cccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 167 VRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 167 ~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
.....+.|||||++|+|++........+||+
T Consensus 9 ~~~~~p~~SpDGk~i~f~s~~~~~g~~diy~ 39 (39)
T PF07676_consen 9 GDDGSPAWSPDGKYIYFTSNRNDRGSFDIYV 39 (39)
T ss_dssp SSEEEEEE-TTSSEEEEEEECT--SSEEEEE
T ss_pred ccccCEEEecCCCEEEEEecCCCCCCcCEEC
Confidence 3567899999999999998654223445663
No 291
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=95.76 E-value=1.9 Score=44.87 Aligned_cols=135 Identities=10% Similarity=0.008 Sum_probs=80.3
Q ss_pred EEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCc-cchHHHHHHHHCCcEEEEEccCCCC-CCCCcc--
Q 004866 466 EQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDK-RWRSELKSLLDRGWVVAFADVRGGG-GGGKKW-- 541 (726)
Q Consensus 466 ~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~-~~~~~~~~l~~~G~~v~~~d~RG~g-~~g~~~-- 541 (726)
|.+++.. ++.++.+ ++.|... +.+.-+||.+||......-+ .-.+....|.++||+.+.+..+.-- ..-...
T Consensus 63 e~~~L~~-~~~~fla-L~~~~~~--~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~ 138 (310)
T PF12048_consen 63 EVQWLQA-GEERFLA-LWRPANS--AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRAT 138 (310)
T ss_pred hcEEeec-CCEEEEE-EEecccC--CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCC
Confidence 4455554 6666665 6666543 34456899999853333222 2345678899999999998877510 000000
Q ss_pred -----ccccccc---------------------CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCC
Q 004866 542 -----HHDGRRT---------------------KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCP 595 (726)
Q Consensus 542 -----~~~~~~~---------------------~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p 595 (726)
..++... .....+.-+.+++.++.+++. .+|+|+|++.|+++++.++...+
T Consensus 139 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~---~~ivlIg~G~gA~~~~~~la~~~ 215 (310)
T PF12048_consen 139 EAEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG---KNIVLIGHGTGAGWAARYLAEKP 215 (310)
T ss_pred CCCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC---ceEEEEEeChhHHHHHHHHhcCC
Confidence 0000000 001223444566666666653 45999999999999999998765
Q ss_pred C-ceeEEEEeCCc
Q 004866 596 D-LFRAVVLEVPF 607 (726)
Q Consensus 596 ~-~f~a~v~~~p~ 607 (726)
. ...+.|++.+.
T Consensus 216 ~~~~daLV~I~a~ 228 (310)
T PF12048_consen 216 PPMPDALVLINAY 228 (310)
T ss_pred CcccCeEEEEeCC
Confidence 4 36778866553
No 292
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=95.74 E-value=1.2 Score=46.58 Aligned_cols=159 Identities=12% Similarity=0.123 Sum_probs=98.8
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
+......|.|.|+..+++ +| .+-+.|+.+|..+.... ...+...++.|||- .|... .....|-++|
T Consensus 306 V~~ls~h~tgeYllsAs~-d~----~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgL--ifgtg---t~d~~vkiwd 375 (506)
T KOG0289|consen 306 VTGLSLHPTGEYLLSASN-DG----TWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGL--IFGTG---TPDGVVKIWD 375 (506)
T ss_pred ceeeeeccCCcEEEEecC-Cc----eEEEEEccCCcEEEEEeeccccceeEEeeEcCCce--EEecc---CCCceEEEEE
Confidence 456678999999988754 33 36678899987654433 23467899999984 33322 1234778888
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC--CceEEeeeecCCEEEE
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE--GLAHCIVEHHEGFLYL 277 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~--~~~~~~~~~~g~~l~~ 277 (726)
+.++. ...-|.....+ .-.+.+|.+|-||+..++.+ .|.++||.... .++.+.... +...+.++..|..|.+
T Consensus 376 lks~~-~~a~Fpght~~-vk~i~FsENGY~Lat~add~---~V~lwDLRKl~-n~kt~~l~~~~~v~s~~fD~SGt~L~~ 449 (506)
T KOG0289|consen 376 LKSQT-NVAKFPGHTGP-VKAISFSENGYWLATAADDG---SVKLWDLRKLK-NFKTIQLDEKKEVNSLSFDQSGTYLGI 449 (506)
T ss_pred cCCcc-ccccCCCCCCc-eeEEEeccCceEEEEEecCC---eEEEEEehhhc-ccceeeccccccceeEEEcCCCCeEEe
Confidence 87654 22223222222 23578999999998877654 38888986532 333443332 2345667767776665
Q ss_pred EecCcccCCCCCCeEEEEeeCCCCCCCCCceEEe
Q 004866 278 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVF 311 (726)
Q Consensus 278 ~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~ 311 (726)
..+ ..++|.+.-. ...|+.+.
T Consensus 450 ~g~---------~l~Vy~~~k~----~k~W~~~~ 470 (506)
T KOG0289|consen 450 AGS---------DLQVYICKKK----TKSWTEIK 470 (506)
T ss_pred ecc---------eeEEEEEecc----cccceeee
Confidence 522 3667777643 47898764
No 293
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=95.71 E-value=0.17 Score=53.47 Aligned_cols=108 Identities=20% Similarity=0.242 Sum_probs=71.4
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
+++|||.+ |+|+.-.+|+ |.||||.....+.... .++.+.+..|+||..|+---.| +-|..+|+.++.
T Consensus 515 La~spDak-vcFsccsdGn----I~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlD-----ntvRcWDlregr 584 (705)
T KOG0639|consen 515 LAISPDAK-VCFSCCSDGN----IAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLD-----NTVRCWDLREGR 584 (705)
T ss_pred hhcCCccc-eeeeeccCCc----EEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCc-----cceeehhhhhhh
Confidence 57899998 6788877775 9999998776555433 4567789999999988654322 356677776543
Q ss_pred ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 205 EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 205 ~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
+ ..-+.-.... .++..+|.+.||++...+ +.++++....+
T Consensus 585 q-lqqhdF~SQI--fSLg~cP~~dWlavGMen---s~vevlh~skp 624 (705)
T KOG0639|consen 585 Q-LQQHDFSSQI--FSLGYCPTGDWLAVGMEN---SNVEVLHTSKP 624 (705)
T ss_pred h-hhhhhhhhhh--eecccCCCccceeeeccc---CcEEEEecCCc
Confidence 1 1111111111 246679999999987653 45777777653
No 294
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=95.63 E-value=2.6 Score=45.36 Aligned_cols=156 Identities=13% Similarity=0.125 Sum_probs=95.8
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGST 203 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~ 203 (726)
....++++|+++ |..+... ..+.++|.++........ ...-..++|+||++.+|.+.... ....+...+-.+.
T Consensus 77 ~~i~v~~~~~~v-yv~~~~~---~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~--~~~~vsvid~~t~ 150 (381)
T COG3391 77 AGVAVNPAGNKV-YVTTGDS---NTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGN--GNNTVSVIDAATN 150 (381)
T ss_pred cceeeCCCCCeE-EEecCCC---CeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEeccc--CCceEEEEeCCCC
Confidence 356789999986 4444332 358999977766554333 22456789999999998875421 3457888887766
Q ss_pred CceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEE------eeccCCceEEeeeecCCEEEE
Q 004866 204 DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTL------IWECEGLAHCIVEHHEGFLYL 277 (726)
Q Consensus 204 ~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~------l~~~~~~~~~~~~~~g~~l~~ 277 (726)
.....++.... + .++.++|+|+.+++.. ...+.|.++|..+. .... +..........++++|..+|+
T Consensus 151 ~~~~~~~vG~~-P--~~~a~~p~g~~vyv~~--~~~~~v~vi~~~~~--~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV 223 (381)
T COG3391 151 KVTATIPVGNT-P--TGVAVDPDGNKVYVTN--SDDNTVSVIDTSGN--SVVRGSVGSLVGVGTGPAGIAVDPDGNRVYV 223 (381)
T ss_pred eEEEEEecCCC-c--ceEEECCCCCeEEEEe--cCCCeEEEEeCCCc--ceeccccccccccCCCCceEEECCCCCEEEE
Confidence 52222332222 2 4678899999988776 34577888887652 2221 212222234457788888777
Q ss_pred EecCcccCCCCCCeEEEEeeCC
Q 004866 278 FTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 278 ~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
.-.... ...+..++..
T Consensus 224 ~~~~~~------~~~v~~id~~ 239 (381)
T COG3391 224 ANDGSG------SNNVLKIDTA 239 (381)
T ss_pred EeccCC------CceEEEEeCC
Confidence 654331 1346666654
No 295
>PRK02888 nitrous-oxide reductase; Validated
Probab=95.62 E-value=0.16 Score=56.50 Aligned_cols=135 Identities=8% Similarity=-0.012 Sum_probs=80.2
Q ss_pred eCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCcee
Q 004866 129 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDA 207 (726)
Q Consensus 129 ~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~ 207 (726)
++|||+.|--. ......+.++|.++.+...... ..+.....++|||+++|.+.++... ...+-.++.++. ...
T Consensus 200 lpnDGk~l~~~----~ey~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~-G~tl~em~a~e~-d~~ 273 (635)
T PRK02888 200 LPNDGKDLDDP----KKYRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEE-GVTLAEMMAAER-DWV 273 (635)
T ss_pred cCCCCCEeecc----cceeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCccc-CcceeeeccccC-ceE
Confidence 79999977322 2334568899999876554323 4455678999999999998754322 223433333221 222
Q ss_pred EEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC----CCCCeEEeeccCCceEEeeeecCCEEEEEe
Q 004866 208 LLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD----PFSGLTLIWECEGLAHCIVEHHEGFLYLFT 279 (726)
Q Consensus 208 lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~----~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t 279 (726)
++|.-... -.+.+|||+.++. .+.|-++|..+ +..-...|.-........++|||+++|+..
T Consensus 274 vvfni~~i-----ea~vkdGK~~~V~-----gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyVan 339 (635)
T PRK02888 274 VVFNIARI-----EEAVKAGKFKTIG-----GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIANG 339 (635)
T ss_pred EEEchHHH-----HHhhhCCCEEEEC-----CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEEeC
Confidence 23321110 1457899988862 35788999876 212223333344445567889999877643
No 296
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=95.59 E-value=0.12 Score=52.36 Aligned_cols=102 Identities=12% Similarity=0.001 Sum_probs=64.2
Q ss_pred eeeCCC-CCEEEEEEeCCCCcEEEEEEEECCCCceecccc--cc--ccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 127 SEVSPD-HKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AV--RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 127 ~~~SPD-G~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~--~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+..+|+ +.-+||. .+-|. .+.++|..+|+...... .+ -++.-.|||||++||-+.++-......|-++|..
T Consensus 10 ~a~~p~~~~avafa-RRPG~---~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~ 85 (305)
T PF07433_consen 10 VAAHPTRPEAVAFA-RRPGT---FALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAA 85 (305)
T ss_pred eeeCCCCCeEEEEE-eCCCc---EEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECc
Confidence 468994 4445555 56774 47899999998775432 22 3467899999999988877654445567777876
Q ss_pred CCCceeEEeeecC-CceEEEEEEcCCCcEEEEEE
Q 004866 202 STDEDALLLEESN-ENVYVNIRHTKDFHFVCVHT 234 (726)
Q Consensus 202 t~~~~~lv~~~~d-~~~~~~~~~s~Dg~~l~~~~ 234 (726)
.+-..+--|.... ++ -.+.+.|||+.|++..
T Consensus 86 ~~~~ri~E~~s~GIGP--Hel~l~pDG~tLvVAN 117 (305)
T PF07433_consen 86 RGYRRIGEFPSHGIGP--HELLLMPDGETLVVAN 117 (305)
T ss_pred CCcEEEeEecCCCcCh--hhEEEcCCCCEEEEEc
Confidence 2212211121110 11 1357899999988754
No 297
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.44 E-value=0.84 Score=44.37 Aligned_cols=198 Identities=9% Similarity=0.015 Sum_probs=103.6
Q ss_pred ceeeCC-CCCEEEEEEeC----CCCcEEEEEEEECCCCceecccc----ccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 126 LSEVSP-DHKFLAYTMYD----KDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 126 ~~~~SP-DG~~la~~~~~----~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
++++|| --++||..... .|+ -.|+|.+++.++-+.+.. .+...+++|++....++++...+ ..|.
T Consensus 13 svqfSPf~~nrLavAt~q~yGl~G~--G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GD----GSLr 86 (311)
T KOG0277|consen 13 SVQFSPFVENRLAVATAQHYGLAGN--GRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGD----GSLR 86 (311)
T ss_pred eeEecccccchhheeehhhcccccC--ceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecC----ceEE
Confidence 346787 23345544221 232 359999997444333211 34567899999998888886533 2466
Q ss_pred EEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEE--eeeecCCE
Q 004866 197 CSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHC--IVEHHEGF 274 (726)
Q Consensus 197 ~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~--~~~~~g~~ 274 (726)
++|+..+......+.|.... ..++.|++-.++++++++=+.+-+||..+... .++.+. ......| .++|.-..
T Consensus 87 l~d~~~~s~Pi~~~kEH~~E-V~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~---Sv~Tf~-gh~~~Iy~a~~sp~~~n 161 (311)
T KOG0277|consen 87 LFDLTMPSKPIHKFKEHKRE-VYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN---SVQTFN-GHNSCIYQAAFSPHIPN 161 (311)
T ss_pred EeccCCCCcchhHHHhhhhh-eEEeccccccceeEEeeccCCceEeecCCCCc---ceEeec-CCccEEEEEecCCCCCC
Confidence 66765444445556554333 23577888888888777544556677655533 223322 2222333 34444444
Q ss_pred EEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecC
Q 004866 275 LYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 275 l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~ 347 (726)
++..+..++ ..+|+.++. + ++...+-.+..+..-.++.-.+..++++...++. |+.+|+.
T Consensus 162 lfas~Sgd~------~l~lwdvr~---~--gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~--vr~wDir 221 (311)
T KOG0277|consen 162 LFASASGDG------TLRLWDVRS---P--GKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNL--VRGWDIR 221 (311)
T ss_pred eEEEccCCc------eEEEEEecC---C--CceeEEEeccceeEeecccccCCcEEEecCCCce--EEEEehh
Confidence 444443332 244554433 2 2223222232222223444456788877766654 4445653
No 298
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=95.40 E-value=1.1 Score=44.42 Aligned_cols=207 Identities=14% Similarity=0.154 Sum_probs=112.0
Q ss_pred cEEEeecccccccCCceEEeeceeeCC-CCCEEEEEEeCCCCcEEEEEEEECCCCce----ecccc-ccccceeEEecCC
Q 004866 105 EQKLLDYNQEAERFGGYAYEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGAL----CSKPQ-AVRVSNIAWAKDG 178 (726)
Q Consensus 105 ~~~lld~n~~~~~~~~~~~~~~~~~SP-DG~~la~~~~~~g~e~~~l~v~dl~tg~~----~~~~~-~~~~~~~~WspDg 178 (726)
.+.+|..|+-++. . .-+..|.|.- |-++|..+ +.+ .+..|||+++|.. +++.. ...+..++|+.+|
T Consensus 137 ~~~~L~~~kns~~-~--aPlTSFDWne~dp~~igtS-SiD----TTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s 208 (364)
T KOG0290|consen 137 LQSVLNNNKNSEF-C--APLTSFDWNEVDPNLIGTS-SID----TTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGS 208 (364)
T ss_pred hhhhhccCccccc-C--CcccccccccCCcceeEee-ccc----CeEEEEEEeeccccceeeEEEecCcceeEEEeccCc
Confidence 3445555543222 1 1466777865 44544443 332 3578999999832 33322 3467889999999
Q ss_pred CEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCC-ceEEEEEEcCCCc-EEEEEEcCCCceEEEEEeCCCCCCCeEE
Q 004866 179 QALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNE-NVYVNIRHTKDFH-FVCVHTFSTTSSKVFLINAADPFSGLTL 256 (726)
Q Consensus 179 ~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~-~~~~~~~~s~Dg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~ 256 (726)
+.+|-+... ...|.+.||..-+..+++|+.+.. .-.+.++|++..- +++ .-...+++|-++|+.-+......
T Consensus 209 ~~~FASvga----DGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymA--Tf~~dS~~V~iLDiR~P~tpva~ 282 (364)
T KOG0290|consen 209 RDVFASVGA----DGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMA--TFAMDSNKVVILDIRVPCTPVAR 282 (364)
T ss_pred cceEEEecC----CCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHh--hhhcCCceEEEEEecCCCcceeh
Confidence 888776432 236888898887777889987652 2235566766543 332 22234578999999887655444
Q ss_pred eeccCCceEE-eeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeee---CCEEEEE
Q 004866 257 IWECEGLAHC-IVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC---KTHMALI 332 (726)
Q Consensus 257 l~~~~~~~~~-~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~---~~~lv~~ 332 (726)
+......+.. .|.|....-+. |-.+ +.+....|+..-+....-.+++.-..+..+..++|. .+.+.+.
T Consensus 283 L~~H~a~VNgIaWaPhS~~hic-taGD-------D~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~ 354 (364)
T KOG0290|consen 283 LRNHQASVNGIAWAPHSSSHIC-TAGD-------DCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAIC 354 (364)
T ss_pred hhcCcccccceEecCCCCceee-ecCC-------cceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEE
Confidence 5444433332 33333332222 2211 245566666511111222233333334455555554 3566555
Q ss_pred E
Q 004866 333 L 333 (726)
Q Consensus 333 ~ 333 (726)
+
T Consensus 355 ~ 355 (364)
T KOG0290|consen 355 F 355 (364)
T ss_pred e
Confidence 4
No 299
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=95.36 E-value=0.23 Score=53.73 Aligned_cols=115 Identities=11% Similarity=0.218 Sum_probs=72.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCE-EEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQA-LIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~-l~y~~~~~~~~~~~l~~~~l 200 (726)
.+..+++.|-|.+||-.++ .| ++.||.+.||..+.... .+.+..++|+|.++. |+-...... +++.+-
T Consensus 402 ~Vr~iSvdp~G~wlasGsd-DG----tvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~-----~~ivnp 471 (733)
T KOG0650|consen 402 LVRSISVDPSGEWLASGSD-DG----TVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGEC-----VLIVNP 471 (733)
T ss_pred eEEEEEecCCcceeeecCC-CC----cEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCc-----eEEeCc
Confidence 5667789999999987653 34 49999999998776544 557788999998863 222222211 111111
Q ss_pred --C-------------------------------C---CCce-eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEE
Q 004866 201 --G-------------------------------S---TDED-ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVF 243 (726)
Q Consensus 201 --~-------------------------------t---~~~~-~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~ 243 (726)
| + .+.. .++..-.. -.-++.|..+|.||+.....+....+.
T Consensus 472 ~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k--~i~~vtWHrkGDYlatV~~~~~~~~Vl 549 (733)
T KOG0650|consen 472 IFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPK--SIRQVTWHRKGDYLATVMPDSGNKSVL 549 (733)
T ss_pred cccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCC--ccceeeeecCCceEEEeccCCCcceEE
Confidence 1 0 0000 00100000 012578999999999988888888888
Q ss_pred EEeCCC
Q 004866 244 LINAAD 249 (726)
Q Consensus 244 ~~d~~~ 249 (726)
+..+..
T Consensus 550 iHQLSK 555 (733)
T KOG0650|consen 550 IHQLSK 555 (733)
T ss_pred EEeccc
Confidence 888876
No 300
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.34 E-value=0.41 Score=49.48 Aligned_cols=75 Identities=16% Similarity=0.100 Sum_probs=46.8
Q ss_pred EeeceeeCCCCCEEEEEEe-----CCC-CcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceE
Q 004866 123 YEELSEVSPDHKFLAYTMY-----DKD-NDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 195 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~-----~~g-~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l 195 (726)
.....++.|||+.-+=... ... .+.-.||.+|+.++....+.. .....+++||||++.||++-. ...+|
T Consensus 112 r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT----~~~~i 187 (307)
T COG3386 112 RPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADT----PANRI 187 (307)
T ss_pred CCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeC----CCCeE
Confidence 3445678999985432222 111 122358888886554444433 334567999999999999843 23478
Q ss_pred EEEEcC
Q 004866 196 YCSIIG 201 (726)
Q Consensus 196 ~~~~l~ 201 (726)
+++++.
T Consensus 188 ~r~~~d 193 (307)
T COG3386 188 HRYDLD 193 (307)
T ss_pred EEEecC
Confidence 888775
No 301
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=95.32 E-value=0.083 Score=59.12 Aligned_cols=81 Identities=17% Similarity=0.279 Sum_probs=60.0
Q ss_pred cEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC-ceeEEeeecCCceEEEEE
Q 004866 146 DYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIR 222 (726)
Q Consensus 146 e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~ 222 (726)
+.+.|.|+|..|-+.++... .+...++.||||||||+-...|. .|..+|+.++. .|.+.+.. + ..++.
T Consensus 554 ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~-----tIr~wDlpt~~lID~~~vd~--~--~~sls 624 (910)
T KOG1539|consen 554 DDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDS-----TIRTWDLPTGTLIDGLLVDS--P--CTSLS 624 (910)
T ss_pred CceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCC-----cEEEEeccCcceeeeEecCC--c--ceeeE
Confidence 35679999998877665432 45778999999999999887654 58889998887 66555432 2 24678
Q ss_pred EcCCCcEEEEEEc
Q 004866 223 HTKDFHFVCVHTF 235 (726)
Q Consensus 223 ~s~Dg~~l~~~~~ 235 (726)
+||+|.+|+....
T Consensus 625 ~SPngD~LAT~Hv 637 (910)
T KOG1539|consen 625 FSPNGDFLATVHV 637 (910)
T ss_pred ECCCCCEEEEEEe
Confidence 8999999975443
No 302
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=95.30 E-value=3.1 Score=42.69 Aligned_cols=142 Identities=9% Similarity=0.041 Sum_probs=87.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-ccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
++-.++.+|+.+++|-. +|+ ---|+|++.+|+..- ++. .+.+....||.||..|+-- ....+|.++..
T Consensus 66 svFavsl~P~~~l~aTG---GgD--D~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATG-----dmsG~v~v~~~ 135 (399)
T KOG0296|consen 66 SVFAVSLHPNNNLVATG---GGD--DLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATG-----DMSGKVLVFKV 135 (399)
T ss_pred ceEEEEeCCCCceEEec---CCC--ceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEec-----CCCccEEEEEc
Confidence 45566789966655432 233 346899999998442 333 5577889999999866543 23457888888
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-EeeeecCCEEEEEe
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 279 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t 279 (726)
.++.....+..+-++. .-+.|.|-+..|+..+.++ .+|.+.+... +..+.+........ ..+.|+|++++...
T Consensus 136 stg~~~~~~~~e~~di--eWl~WHp~a~illAG~~DG---svWmw~ip~~-~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy 209 (399)
T KOG0296|consen 136 STGGEQWKLDQEVEDI--EWLKWHPRAHILLAGSTDG---SVWMWQIPSQ-ALCKVMSGHNSPCTCGEFIPDGKRILTGY 209 (399)
T ss_pred ccCceEEEeecccCce--EEEEecccccEEEeecCCC---cEEEEECCCc-ceeeEecCCCCCcccccccCCCceEEEEe
Confidence 8876444444333333 2368999887777655543 5888887663 23333433222222 23557888876655
Q ss_pred c
Q 004866 280 D 280 (726)
Q Consensus 280 ~ 280 (726)
.
T Consensus 210 ~ 210 (399)
T KOG0296|consen 210 D 210 (399)
T ss_pred c
Confidence 4
No 303
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.27 E-value=5 Score=49.22 Aligned_cols=114 Identities=10% Similarity=0.078 Sum_probs=69.0
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc------------------ccccceeEEecCCCEEEEEEe
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ------------------AVRVSNIAWAKDGQALIYVVT 186 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~------------------~~~~~~~~WspDg~~l~y~~~ 186 (726)
.+++++++|+.| |+.|..+ ..|+++|+.++....+.. ...-..++++|++..||++..
T Consensus 627 ~GIavd~~gn~L-YVaDt~n---~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~ 702 (1057)
T PLN02919 627 QGLAYNAKKNLL-YVADTEN---HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMA 702 (1057)
T ss_pred cEEEEeCCCCEE-EEEeCCC---ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEEC
Confidence 345788888876 5556544 358888988876543211 011235789998777877642
Q ss_pred cCCCCCceEEEEEcCCCCceeEEeeec------C------C--ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 187 DQNKRPYQIYCSIIGSTDEDALLLEES------N------E--NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 187 ~~~~~~~~l~~~~l~t~~~~~lv~~~~------d------~--~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
..++|++++..++.. .++... + . ..-.+++++|||++|++.... .+.|+++|+.++
T Consensus 703 ----~~~~I~v~d~~~g~v--~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~--n~~Irv~D~~tg 772 (1057)
T PLN02919 703 ----GQHQIWEYNISDGVT--RVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE--SSSIRALDLKTG 772 (1057)
T ss_pred ----CCCeEEEEECCCCeE--EEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC--CCeEEEEECCCC
Confidence 235788888765431 111100 0 0 011357899999998876543 357888988763
No 304
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=95.25 E-value=0.22 Score=50.71 Aligned_cols=114 Identities=11% Similarity=0.081 Sum_probs=71.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+.++++++++.+|||-.++.. .+|+++|+.+-+.+.... .+....+++++||..|+-. .+. ..-|.++.+
T Consensus 131 gl~AlS~n~~n~ylAyp~s~t~---GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATA-SeK---GTVIRVf~v 203 (391)
T KOG2110|consen 131 GLCALSPNNANCYLAYPGSTTS---GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATA-SEK---GTVIRVFSV 203 (391)
T ss_pred ceEeeccCCCCceEEecCCCCC---ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEe-ccC---ceEEEEEEc
Confidence 4566678888889999755443 359999988765544322 4567789999999977654 332 234555566
Q ss_pred CCCCceeEEeeecCCceE---EEEEEcCCCcEEEEEEcCCCceEEEEEeC
Q 004866 201 GSTDEDALLLEESNENVY---VNIRHTKDFHFVCVHTFSTTSSKVFLINA 247 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~---~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 247 (726)
.+++ .+++--.+.+. .+++++||+++|..+++.. +-.|+.++.
T Consensus 204 ~~G~---kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~Te-TVHiFKL~~ 249 (391)
T KOG2110|consen 204 PEGQ---KLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTE-TVHIFKLEK 249 (391)
T ss_pred CCcc---EeeeeeCCceeeEEEEEEECCCCCeEEEecCCC-eEEEEEecc
Confidence 5442 24433222222 3678999999987766543 344555443
No 305
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=95.20 E-value=3.8 Score=40.93 Aligned_cols=173 Identities=12% Similarity=0.109 Sum_probs=88.9
Q ss_pred cEEEeecccccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEE
Q 004866 105 EQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQAL 181 (726)
Q Consensus 105 ~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l 181 (726)
-++-++.-.++.-.. .+++++|.||.+.|+.+.|..+ .|+.++++ |+.+.... .....++++..+++ +
T Consensus 8 y~~~i~~~~l~g~~~---e~SGLTy~pd~~tLfaV~d~~~----~i~els~~-G~vlr~i~l~g~~D~EgI~y~g~~~-~ 78 (248)
T PF06977_consen 8 YRVVIEAKPLPGILD---ELSGLTYNPDTGTLFAVQDEPG----EIYELSLD-GKVLRRIPLDGFGDYEGITYLGNGR-Y 78 (248)
T ss_dssp -EEEEEEEE-TT--S----EEEEEEETTTTEEEEEETTTT----EEEEEETT---EEEEEE-SS-SSEEEEEE-STTE-E
T ss_pred cEEEEeeeECCCccC---CccccEEcCCCCeEEEEECCCC----EEEEEcCC-CCEEEEEeCCCCCCceeEEEECCCE-E
Confidence 355566444543322 5889999999999877776544 48889985 66554322 23456788987764 3
Q ss_pred EEEEecCCCCCceEEEEEcCCCC--cee---EEe--ee--cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCC
Q 004866 182 IYVVTDQNKRPYQIYCSIIGSTD--EDA---LLL--EE--SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFS 252 (726)
Q Consensus 182 ~y~~~~~~~~~~~l~~~~l~t~~--~~~---lv~--~~--~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~ 252 (726)
+.+ . .+..+|+.+++.... .+. .-+ .. .+..-+-+++|.+.++.|++... .....||-++......
T Consensus 79 vl~-~---Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE-~~P~~l~~~~~~~~~~ 153 (248)
T PF06977_consen 79 VLS-E---ERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKE-RKPKRLYEVNGFPGGF 153 (248)
T ss_dssp EEE-E---TTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEE-SSSEEEEEEESTT-SS
T ss_pred EEE-E---cCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeC-CCChhhEEEccccCcc
Confidence 333 2 234588888884332 111 111 11 12222568999999888876543 3345688887622111
Q ss_pred CeEEee--cc-------CCceEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 253 GLTLIW--EC-------EGLAHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 253 ~~~~l~--~~-------~~~~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
...... .. .+-....+.+..++||++++.. ..|+.+|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es--------~~l~~~d~~ 201 (248)
T PF06977_consen 154 DLFVSDDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDES--------RLLLELDRQ 201 (248)
T ss_dssp --EEEE-HHHH-HT--SS---EEEEETTTTEEEEEETTT--------TEEEEE-TT
T ss_pred ceeeccccccccccceeccccceEEcCCCCeEEEEECCC--------CeEEEECCC
Confidence 111111 00 0111233457778999998865 346777654
No 306
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.12 E-value=0.85 Score=47.40 Aligned_cols=145 Identities=15% Similarity=0.061 Sum_probs=75.5
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc-cc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
..+++++||..||-.- .+| .++|++..+-..... .. ...+.++.|||||+.|+++..+ ...||- +.+
T Consensus 148 k~vaf~~~gs~latgg-~dg----~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d----~~~VW~--~~~ 216 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGG-TDG----TLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD----SARVWS--VNT 216 (398)
T ss_pred eEEEEcCCCCEeeecc-ccc----eEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC----ceEEEE--ecc
Confidence 4568999999998762 334 589999544433222 11 3456789999999999998543 234554 444
Q ss_pred CC-ceeEEeeecCCceEEEEEEcCCC--cEEEEEEc--CCCceEEEEEeCCCCC--CCeEEeeccCCc-eEEeeeecCCE
Q 004866 203 TD-EDALLLEESNENVYVNIRHTKDF--HFVCVHTF--STTSSKVFLINAADPF--SGLTLIWECEGL-AHCIVEHHEGF 274 (726)
Q Consensus 203 ~~-~~~lv~~~~d~~~~~~~~~s~Dg--~~l~~~~~--~~~~~~l~~~d~~~~~--~~~~~l~~~~~~-~~~~~~~~g~~ 274 (726)
+. -..+.-.+.+.. +..+.++.|+ ..|.+... +.....++.+-+-.+. ...+....+... ....++.+|+.
T Consensus 217 g~~~a~~t~~~k~~~-~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf 295 (398)
T KOG0771|consen 217 GAALARKTPFSKDEM-FSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKF 295 (398)
T ss_pred CchhhhcCCcccchh-hhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcE
Confidence 32 111111122322 2345566665 33333332 2222222222222211 122222233333 34567888888
Q ss_pred EEEEecC
Q 004866 275 LYLFTDA 281 (726)
Q Consensus 275 l~~~t~~ 281 (726)
+.+-|+.
T Consensus 296 ~AlGT~d 302 (398)
T KOG0771|consen 296 LALGTMD 302 (398)
T ss_pred EEEeccC
Confidence 8888874
No 307
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=95.00 E-value=0.2 Score=50.22 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=68.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+.-+.|+-|.-++..+...++ -+.++++..-+..-... ....+...||||||.|+-++.- ..+|-...+.
T Consensus 51 i~yieW~ads~~ilC~~yk~~----~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF----~lriTVWSL~ 122 (447)
T KOG4497|consen 51 IVYIEWKADSCHILCVAYKDP----KVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEF----DLRITVWSLN 122 (447)
T ss_pred hhheeeeccceeeeeeeeccc----eEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecc----eeEEEEEEec
Confidence 445679999999998877666 38899998776654322 2356788999999999887532 2245555565
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCC
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
+.. -.++-..... .-+++++|||++.++.+.++
T Consensus 123 t~~-~~~~~~pK~~--~kg~~f~~dg~f~ai~sRrD 155 (447)
T KOG4497|consen 123 TQK-GYLLPHPKTN--VKGYAFHPDGQFCAILSRRD 155 (447)
T ss_pred cce-eEEecccccC--ceeEEECCCCceeeeeeccc
Confidence 542 1222111111 13578999999999888764
No 308
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=94.95 E-value=0.6 Score=46.66 Aligned_cols=132 Identities=17% Similarity=0.286 Sum_probs=87.5
Q ss_pred EEEEEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcC-CCCCC--CCccc-hHHHHHHHHCCcEEEEEccCCCCCCCCc
Q 004866 465 CEQYDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHG-AYGEL--LDKRW-RSELKSLLDRGWVVAFADVRGGGGGGKK 540 (726)
Q Consensus 465 ~~~~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hG-g~~~~--~~~~~-~~~~~~l~~~G~~v~~~d~RG~g~~g~~ 540 (726)
+++..+.+.-| .|++.|+= .++++.|+||..|. |-... ...-| .+.++.++++ ++|+-+|.+|+-.-...
T Consensus 22 ~~e~~V~T~~G-~v~V~V~G----d~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~ 95 (326)
T KOG2931|consen 22 CQEHDVETAHG-VVHVTVYG----DPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPS 95 (326)
T ss_pred ceeeeeccccc-cEEEEEec----CCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCcc
Confidence 45555666667 46665542 23346788999997 32221 11112 3567788888 99999999998642221
Q ss_pred ccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcc
Q 004866 541 WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFL 608 (726)
Q Consensus 541 ~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~ 608 (726)
+ .......+.+|+.+-+-.+.+. ..-+-|.-+|--+|+++-++.|..||+++-+.|++.+..
T Consensus 96 ~----p~~y~yPsmd~LAd~l~~VL~~--f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~ 157 (326)
T KOG2931|consen 96 F----PEGYPYPSMDDLADMLPEVLDH--FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDP 157 (326)
T ss_pred C----CCCCCCCCHHHHHHHHHHHHHh--cCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCC
Confidence 1 1222234677777766666643 223678899999999999999999999999999887653
No 309
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=94.92 E-value=0.85 Score=46.57 Aligned_cols=113 Identities=14% Similarity=0.056 Sum_probs=76.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc--cccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP--QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
++....||.||.+||-. +-.| .|.|+...+|...... .-....-+.|.|-+..|+.-..+ ..||.+.+
T Consensus 108 SVt~~~FshdgtlLATG-dmsG----~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~D-----GsvWmw~i 177 (399)
T KOG0296|consen 108 SVTCCSFSHDGTLLATG-DMSG----KVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTD-----GSVWMWQI 177 (399)
T ss_pred ceEEEEEccCceEEEec-CCCc----cEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCC-----CcEEEEEC
Confidence 67788999999999875 5556 4899999998655432 12345668899987766665333 36999999
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
.+.. ...++.....+-- .-.+.||||.|+....+ ..|.++|+.++
T Consensus 178 p~~~-~~kv~~Gh~~~ct-~G~f~pdGKr~~tgy~d---gti~~Wn~ktg 222 (399)
T KOG0296|consen 178 PSQA-LCKVMSGHNSPCT-CGEFIPDGKRILTGYDD---GTIIVWNPKTG 222 (399)
T ss_pred CCcc-eeeEecCCCCCcc-cccccCCCceEEEEecC---ceEEEEecCCC
Confidence 8853 2334443333322 23579999998765553 34777888874
No 310
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=94.90 E-value=1.4 Score=49.27 Aligned_cols=191 Identities=16% Similarity=0.222 Sum_probs=103.1
Q ss_pred eeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEE-EEcCCCC
Q 004866 128 EVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC-SIIGSTD 204 (726)
Q Consensus 128 ~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~-~~l~t~~ 204 (726)
.+-|-+++|.... ..| .|-|+|+++...+.... .+...+++-+||++.++-...|.+-+....-. .+.+..+
T Consensus 419 ~Fvpgd~~Iv~G~-k~G----el~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~ 493 (888)
T KOG0306|consen 419 KFVPGDRYIVLGT-KNG----ELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQ 493 (888)
T ss_pred EecCCCceEEEec-cCC----ceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCccc
Confidence 5778888887764 344 38899999987766544 45667788899999987765443311111111 1111111
Q ss_pred ceeE------EeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCc-eEEeeeecCCEEEE
Q 004866 205 EDAL------LLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYL 277 (726)
Q Consensus 205 ~~~l------v~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~~~~~~~~g~~l~~ 277 (726)
..++ +.+-++. ...+..||||++|++..-+. +-.||.+|.=. -...+....-. ....+++|.+ +.+
T Consensus 494 ~k~lsl~~~rtLel~dd--vL~v~~Spdgk~LaVsLLdn-TVkVyflDtlK---FflsLYGHkLPV~smDIS~DSk-liv 566 (888)
T KOG0306|consen 494 KKVLSLKHTRTLELEDD--VLCVSVSPDGKLLAVSLLDN-TVKVYFLDTLK---FFLSLYGHKLPVLSMDISPDSK-LIV 566 (888)
T ss_pred ceeeeeccceEEecccc--EEEEEEcCCCcEEEEEeccC-eEEEEEeccee---eeeeecccccceeEEeccCCcC-eEE
Confidence 1111 1122222 24578899999999876543 45667666321 01111111111 2235667666 444
Q ss_pred EecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeee-CCEEEEEEEeCCeeEEEEEe
Q 004866 278 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC-KTHMALILREGRTYRLCSVS 345 (726)
Q Consensus 278 ~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~~ 345 (726)
...++. |.+++-+|+. +.- +.++.++.. +-.+... ..+++++...+|. +..+|
T Consensus 567 TgSADK------nVKiWGLdFG-DCH----KS~fAHdDS--vm~V~F~P~~~~FFt~gKD~k--vKqWD 620 (888)
T KOG0306|consen 567 TGSADK------NVKIWGLDFG-DCH----KSFFAHDDS--VMSVQFLPKTHLFFTCGKDGK--VKQWD 620 (888)
T ss_pred eccCCC------ceEEeccccc-hhh----hhhhcccCc--eeEEEEcccceeEEEecCcce--EEeec
Confidence 444442 6888888876 322 234445432 2333333 5677888777764 34454
No 311
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=94.90 E-value=0.71 Score=50.22 Aligned_cols=146 Identities=10% Similarity=-0.061 Sum_probs=85.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-ccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+-+++||+||+++|-. |+ ...++|+|..+-++.. ... ...+-.++|+|=.+.|+-+.-. .....|..++.
T Consensus 303 eVCgLkws~d~~~lASG----gn-DN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGG--s~D~~i~fwn~ 375 (484)
T KOG0305|consen 303 EVCGLKWSPDGNQLASG----GN-DNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGG--SADRCIKFWNT 375 (484)
T ss_pred eeeeeEECCCCCeeccC----CC-ccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCC--CcccEEEEEEc
Confidence 46678999999998754 33 2359999985544332 222 4467789999998888876422 23346777777
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-EeeeecCCEEEEEe
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLYLFT 279 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t 279 (726)
.++.. +-.........++.||+..+.|+.+.... .++|-+++..+. .....+......+. ..++|||..+...+
T Consensus 376 ~~g~~---i~~vdtgsQVcsL~Wsk~~kEi~sthG~s-~n~i~lw~~ps~-~~~~~l~gH~~RVl~la~SPdg~~i~t~a 450 (484)
T KOG0305|consen 376 NTGAR---IDSVDTGSQVCSLIWSKKYKELLSTHGYS-ENQITLWKYPSM-KLVAELLGHTSRVLYLALSPDGETIVTGA 450 (484)
T ss_pred CCCcE---ecccccCCceeeEEEcCCCCEEEEecCCC-CCcEEEEecccc-ceeeeecCCcceeEEEEECCCCCEEEEec
Confidence 76641 11112233456899999999987665432 234444443331 12223333333222 34567777665544
Q ss_pred c
Q 004866 280 D 280 (726)
Q Consensus 280 ~ 280 (726)
.
T Consensus 451 ~ 451 (484)
T KOG0305|consen 451 A 451 (484)
T ss_pred c
Confidence 3
No 312
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=94.85 E-value=8.1 Score=42.93 Aligned_cols=168 Identities=11% Similarity=0.088 Sum_probs=86.3
Q ss_pred CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeecc----CCceEEeeeecCCEEEEEecCcccCCCCC
Q 004866 214 NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC----EGLAHCIVEHHEGFLYLFTDAAKEGQEAD 289 (726)
Q Consensus 214 d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~----~~~~~~~~~~~g~~l~~~t~~~~~~~~~~ 289 (726)
+..+....+.||||.+|++.+-.. ..||.+.-+. .-..+.+... .+.....++-+++.+++.+..
T Consensus 381 ~~~nIs~~aiSPdg~~Ia~st~~~--~~iy~L~~~~-~vk~~~v~~~~~~~~~a~~i~ftid~~k~~~~s~~-------- 449 (691)
T KOG2048|consen 381 EKENISCAAISPDGNLIAISTVSR--TKIYRLQPDP-NVKVINVDDVPLALLDASAISFTIDKNKLFLVSKN-------- 449 (691)
T ss_pred CccceeeeccCCCCCEEEEeeccc--eEEEEeccCc-ceeEEEeccchhhhccceeeEEEecCceEEEEecc--------
Confidence 344444567899999999877543 3466655433 1111211111 112233445678877777732
Q ss_pred CeEEEEeeCCCCCCCCCceEEeecCCCceEEE--EeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeecccccccccC
Q 004866 290 NHYLLRCPVDASFPSRTWESVFIDDQGLVVED--VDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKELHPHFLPL 367 (726)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~--~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 367 (726)
.+.|....++ .+.......+.+......|.. ....+++|.+.. +...|+++++.+.+.+ .+ ...+
T Consensus 450 ~~~le~~el~-~ps~kel~~~~~~~~~~~I~~l~~SsdG~yiaa~~---t~g~I~v~nl~~~~~~------~l---~~rl 516 (691)
T KOG2048|consen 450 IFSLEEFELE-TPSFKELKSIQSQAKCPSISRLVVSSDGNYIAAIS---TRGQIFVYNLETLESH------LL---KVRL 516 (691)
T ss_pred cceeEEEEec-CcchhhhhccccccCCCcceeEEEcCCCCEEEEEe---ccceEEEEEcccceee------cc---hhcc
Confidence 2456666665 444433333332211222333 334567777665 5567899998765421 11 1122
Q ss_pred CCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEE
Q 004866 368 PKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNI 412 (726)
Q Consensus 368 p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~ 412 (726)
+..+..+ +.+ .++.+.+++..++ .++|.+|+...++.+
T Consensus 517 n~~vTa~--~~~-~~~~~~lvvats~----nQv~efdi~~~~l~~ 554 (691)
T KOG2048|consen 517 NIDVTAA--AFS-PFVRNRLVVATSN----NQVFEFDIEARNLTR 554 (691)
T ss_pred Ccceeee--ecc-ccccCcEEEEecC----CeEEEEecchhhhhh
Confidence 2211111 111 2455666666555 589999996655433
No 313
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.75 E-value=0.12 Score=51.69 Aligned_cols=85 Identities=21% Similarity=0.184 Sum_probs=58.5
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.|+++|++-|.. ..|.+....|... ..|+....+|.+.-. ....+++|..+..-..+.+- -....
T Consensus 1 ~pLF~fhp~~G~~--~~~~~L~~~l~~~-~~v~~l~a~g~~~~~----------~~~~~l~~~a~~yv~~Ir~~-QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSV--LAYAPLAAALGPL-LPVYGLQAPGYGAGE----------QPFASLDDMAAAYVAAIRRV-QPEGP 66 (257)
T ss_pred CCEEEEcCCCCcH--HHHHHHHHHhccC-ceeeccccCcccccc----------cccCCHHHHHHHHHHHHHHh-CCCCC
Confidence 5688899976633 5567777777666 889999999876421 22346777666544444321 12358
Q ss_pred EEEEEecccHHHHHHHHHc
Q 004866 575 LAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~ 593 (726)
..+.|+|+||.++..++.+
T Consensus 67 y~L~G~S~GG~vA~evA~q 85 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQ 85 (257)
T ss_pred EEEEeeccccHHHHHHHHH
Confidence 9999999999999988876
No 314
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=94.72 E-value=1.8 Score=48.55 Aligned_cols=137 Identities=11% Similarity=0.142 Sum_probs=75.7
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+-+.++|||.++|.=. +|...+++|.+.|-..+..-. ..-+..+.|+|-| .||.+. ...+..+||-.+-.
T Consensus 454 Vyg~sFsPd~rfLlSc-----SED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~G--yYFata-s~D~tArLWs~d~~ 525 (707)
T KOG0263|consen 454 VYGCSFSPDRRFLLSC-----SEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRG--YYFATA-SHDQTARLWSTDHN 525 (707)
T ss_pred eeeeeecccccceeec-----cCCcceeeeecccceeEEEecCCCcceeeEEecCCc--eEEEec-CCCceeeeeecccC
Confidence 4566899999988543 223458899988875543322 1234457788865 555543 22334467765532
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-EeeeecCCEEE
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEGFLY 276 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~ 276 (726)
.+ .++.+-+-.|-.. +.+.|++.|++-.+ ....+.++|..++. .++.++.....+. ..++|+|..|.
T Consensus 526 ~P-lRifaghlsDV~c---v~FHPNs~Y~aTGS---sD~tVRlWDv~~G~-~VRiF~GH~~~V~al~~Sp~Gr~La 593 (707)
T KOG0263|consen 526 KP-LRIFAGHLSDVDC---VSFHPNSNYVATGS---SDRTVRLWDVSTGN-SVRIFTGHKGPVTALAFSPCGRYLA 593 (707)
T ss_pred Cc-hhhhcccccccce---EEECCcccccccCC---CCceEEEEEcCCCc-EEEEecCCCCceEEEEEcCCCceEe
Confidence 21 2222212222221 57899999986432 23456777877742 3444444333333 35678887554
No 315
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=94.65 E-value=0.19 Score=51.05 Aligned_cols=116 Identities=8% Similarity=0.141 Sum_probs=73.7
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
+-.+..++++|--..|.-+...++ .|.++|+.++.++.... .-....++|+| ..+-|+.. ++.+.||.+|
T Consensus 187 ~Dti~svkfNpvETsILas~~sDr----sIvLyD~R~~~Pl~KVi~~mRTN~IswnP--eafnF~~a---~ED~nlY~~D 257 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASCASDR----SIVLYDLRQASPLKKVILTMRTNTICWNP--EAFNFVAA---NEDHNLYTYD 257 (433)
T ss_pred CCceeEEecCCCcchheeeeccCC----ceEEEecccCCccceeeeeccccceecCc--cccceeec---cccccceehh
Confidence 346677788998888766543223 39999999998876544 44667899999 45556543 3456799998
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+..-....-++...- .-..++.+||-|+-++-.+.+ ..|.+++...
T Consensus 258 mR~l~~p~~v~~dhv-sAV~dVdfsptG~EfvsgsyD---ksIRIf~~~~ 303 (433)
T KOG0268|consen 258 MRNLSRPLNVHKDHV-SAVMDVDFSPTGQEFVSGSYD---KSIRIFPVNH 303 (433)
T ss_pred hhhhcccchhhcccc-eeEEEeccCCCcchhcccccc---ceEEEeecCC
Confidence 764433333443221 223578899999987644432 2355555544
No 316
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=94.58 E-value=1.8 Score=42.01 Aligned_cols=189 Identities=14% Similarity=0.104 Sum_probs=104.6
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
+...+||.|.++|.- +|.|. -|+|+|+..-+.-+... ...+..+.|....+.|+-...+ ..|.++|.
T Consensus 103 vk~~af~~ds~~llt----gg~ek-llrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd-----~tVRLWD~ 172 (334)
T KOG0278|consen 103 VKAVAFSQDSNYLLT----GGQEK-LLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADD-----KTVRLWDH 172 (334)
T ss_pred eeeEEecccchhhhc----cchHH-HhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccC-----CceEEEEe
Confidence 455677777777643 34433 47888887655433222 3456678899888888665322 24667777
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC---ceEEeeeecCCEEEE
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG---LAHCIVEHHEGFLYL 277 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~---~~~~~~~~~g~~l~~ 277 (726)
.++.....+.- +.+ ..++..|+||++|.+...+ .|-.+|..+ +.++....- .....+.|+. .+|+
T Consensus 173 rTgt~v~sL~~-~s~--VtSlEvs~dG~ilTia~gs----sV~Fwdaks----f~~lKs~k~P~nV~SASL~P~k-~~fV 240 (334)
T KOG0278|consen 173 RTGTEVQSLEF-NSP--VTSLEVSQDGRILTIAYGS----SVKFWDAKS----FGLLKSYKMPCNVESASLHPKK-EFFV 240 (334)
T ss_pred ccCcEEEEEec-CCC--CcceeeccCCCEEEEecCc----eeEEecccc----ccceeeccCccccccccccCCC-ceEE
Confidence 77652222221 111 2356789999999876543 356666654 222332222 1223444544 5555
Q ss_pred EecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeC-CEEEEEEEeCCeeEEEEEec
Q 004866 278 FTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSL 346 (726)
Q Consensus 278 ~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l 346 (726)
..+. .++++++|.. .... .........+ .+-.+.... +.+|...+++|.-+|+....
T Consensus 241 aGge--------d~~~~kfDy~-TgeE--i~~~nkgh~g-pVhcVrFSPdGE~yAsGSEDGTirlWQt~~ 298 (334)
T KOG0278|consen 241 AGGE--------DFKVYKFDYN-TGEE--IGSYNKGHFG-PVHCVRFSPDGELYASGSEDGTIRLWQTTP 298 (334)
T ss_pred ecCc--------ceEEEEEecc-CCce--eeecccCCCC-ceEEEEECCCCceeeccCCCceEEEEEecC
Confidence 4443 3778888876 2211 1110111111 233344333 57788889999989888764
No 317
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.58 E-value=0.87 Score=47.33 Aligned_cols=115 Identities=18% Similarity=0.157 Sum_probs=64.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc-cc---ccccceeEEecCCC--EEEEEEecCCCCCceEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ---AVRVSNIAWAKDGQ--ALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~---~~~~~~~~WspDg~--~l~y~~~~~~~~~~~l~ 196 (726)
.+.++.|||||+.||++... ...||++.+|..++. +. ...+....|+.|+. .++..........-.++
T Consensus 188 eV~DL~FS~dgk~lasig~d------~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~ 261 (398)
T KOG0771|consen 188 EVKDLDFSPDGKFLASIGAD------SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC 261 (398)
T ss_pred ccccceeCCCCcEEEEecCC------ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence 67888999999999998422 378999999965542 21 33567788888872 23222222111111222
Q ss_pred EEEcCCC----CceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 197 CSIIGST----DEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 197 ~~~l~t~----~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
...+..+ .....+.. .. -...+.+|+||+++++.+.++ .|-++++.+
T Consensus 262 ~~~~w~~~~~l~~~~~~~~--~~-siSsl~VS~dGkf~AlGT~dG---sVai~~~~~ 312 (398)
T KOG0771|consen 262 DISLWSGSNFLRLRKKIKR--FK-SISSLAVSDDGKFLALGTMDG---SVAIYDAKS 312 (398)
T ss_pred Eeeeeccccccchhhhhhc--cC-cceeEEEcCCCcEEEEeccCC---cEEEEEece
Confidence 2222222 11111111 00 123567899999999988743 455555543
No 318
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=94.43 E-value=0.9 Score=46.38 Aligned_cols=153 Identities=11% Similarity=0.059 Sum_probs=83.3
Q ss_pred EeeceeeCCCCCE-EEEEEeCCCCcEEEEEEEECCCC----ce--------ecccc---ccccceeEEecCCCEEEEEEe
Q 004866 123 YEELSEVSPDHKF-LAYTMYDKDNDYFTLSVRNLNSG----AL--------CSKPQ---AVRVSNIAWAKDGQALIYVVT 186 (726)
Q Consensus 123 ~~~~~~~SPDG~~-la~~~~~~g~e~~~l~v~dl~tg----~~--------~~~~~---~~~~~~~~WspDg~~l~y~~~ 186 (726)
.+..++|-|-+.. ||+.. +.| |.+|..+.- .. .++.. ...+.++.|.+||..+.-.+.
T Consensus 142 nvtclawRPlsaselavgC-r~g-----IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~ 215 (445)
T KOG2139|consen 142 NVTCLAWRPLSASELAVGC-RAG-----ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASF 215 (445)
T ss_pred ceeEEEeccCCcceeeeee-cce-----eEEEEcCcccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeeccc
Confidence 4556778886655 44443 444 666654321 11 11111 124578999999987765543
Q ss_pred cCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE-eCCCCCCCeEEeeccCCceE
Q 004866 187 DQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI-NAADPFSGLTLIWECEGLAH 265 (726)
Q Consensus 187 ~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~-d~~~~~~~~~~l~~~~~~~~ 265 (726)
. ...+.+.+.++++...+... .-+. +.-+.|||||.+|+-.+-+. ...||-. ..-+ .+...+.+. ....
T Consensus 216 g----sssi~iWdpdtg~~~pL~~~-glgg-~slLkwSPdgd~lfaAt~da-vfrlw~e~q~wt--~erw~lgsg-rvqt 285 (445)
T KOG2139|consen 216 G----SSSIMIWDPDTGQKIPLIPK-GLGG-FSLLKWSPDGDVLFAATCDA-VFRLWQENQSWT--KERWILGSG-RVQT 285 (445)
T ss_pred C----cceEEEEcCCCCCccccccc-CCCc-eeeEEEcCCCCEEEEecccc-eeeeehhcccce--ecceeccCC-ceee
Confidence 3 23677888887764333311 1122 33478999999987554432 2344411 1111 112222222 2223
Q ss_pred EeeeecCCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 266 CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 266 ~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
.-|+|+|+.|+|..... ..||.+..+
T Consensus 286 acWspcGsfLLf~~sgs--------p~lysl~f~ 311 (445)
T KOG2139|consen 286 ACWSPCGSFLLFACSGS--------PRLYSLTFD 311 (445)
T ss_pred eeecCCCCEEEEEEcCC--------ceEEEEeec
Confidence 45789999988887643 347777654
No 319
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=94.42 E-value=2.3 Score=44.99 Aligned_cols=112 Identities=13% Similarity=0.132 Sum_probs=66.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCE---------EEEEEecCCCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQA---------LIYVVTDQNKR 191 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~---------l~y~~~~~~~~ 191 (726)
.+..++|.|-|+.||-.++ ++ +|.+|....+....... ...+..+.|||+|.. |+-...
T Consensus 361 ~V~alk~n~tg~LLaS~Sd-D~----TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~----- 430 (524)
T KOG0273|consen 361 EVNALKWNPTGSLLASCSD-DG----TLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASF----- 430 (524)
T ss_pred ceEEEEECCCCceEEEecC-CC----eeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeec-----
Confidence 5777889999998887654 23 58888865443322111 224567889998852 222211
Q ss_pred CceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 192 PYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 192 ~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
..-|.++++..+.. .-.|.....+. .++++||||+||+..+.++ -|.+++..+
T Consensus 431 dstV~lwdv~~gv~-i~~f~kH~~pV-ysvafS~~g~ylAsGs~dg---~V~iws~~~ 483 (524)
T KOG0273|consen 431 DSTVKLWDVESGVP-IHTLMKHQEPV-YSVAFSPNGRYLASGSLDG---CVHIWSTKT 483 (524)
T ss_pred CCeEEEEEccCCce-eEeeccCCCce-EEEEecCCCcEEEecCCCC---eeEeccccc
Confidence 23567777776641 12232222222 2578999999998544433 466666655
No 320
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=94.38 E-value=0.7 Score=44.75 Aligned_cols=113 Identities=11% Similarity=0.092 Sum_probs=71.3
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+....+|+||++|..+- |+ .|.++|..+-+.+.-.. ..++.+.+-+|+. .+|..- +....+|.+|..|
T Consensus 187 VtSlEvs~dG~ilTia~---gs---sV~Fwdaksf~~lKs~k~P~nV~SASL~P~k-~~fVaG----ged~~~~kfDy~T 255 (334)
T KOG0278|consen 187 VTSLEVSQDGRILTIAY---GS---SVKFWDAKSFGLLKSYKMPCNVESASLHPKK-EFFVAG----GEDFKVYKFDYNT 255 (334)
T ss_pred CcceeeccCCCEEEEec---Cc---eeEEeccccccceeeccCccccccccccCCC-ceEEec----CcceEEEEEeccC
Confidence 55678999999987652 22 38899998876654333 6678888999986 565542 3456899999988
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+.+ +-.|......-..-+.+||||..-+ +-+.+++-.||......
T Consensus 256 geE-i~~~nkgh~gpVhcVrFSPdGE~yA-sGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 256 GEE-IGSYNKGHFGPVHCVRFSPDGELYA-SGSEDGTIRLWQTTPGK 300 (334)
T ss_pred Cce-eeecccCCCCceEEEEECCCCceee-ccCCCceEEEEEecCCC
Confidence 853 3333211111123478899997433 22333455677665543
No 321
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=94.37 E-value=6.2 Score=39.42 Aligned_cols=194 Identities=13% Similarity=0.067 Sum_probs=99.8
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
-+..+.||+|.++|+-+ +.+| .|.|||.-|...+.... ..-+...++||.|+.++---.+ +..-++++
T Consensus 57 Ki~~~~ws~Dsr~ivSa-SqDG----klIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLd-----N~Csiy~l 126 (343)
T KOG0286|consen 57 KIYAMDWSTDSRRIVSA-SQDG----KLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLD-----NKCSIYPL 126 (343)
T ss_pred ceeeeEecCCcCeEEee-ccCC----eEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcC-----ceeEEEec
Confidence 35567899999998665 4556 38999988875544322 2346778999999988775433 23344455
Q ss_pred CCCCce---eEEeeecCCceEEE-EEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCce-EEeeee-cCCE
Q 004866 201 GSTDED---ALLLEESNENVYVN-IRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEH-HEGF 274 (726)
Q Consensus 201 ~t~~~~---~lv~~~~d~~~~~~-~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-~~~~~~-~g~~ 274 (726)
.+...+ .+.-+-....-|++ ..+.+|+. |+ +.+ +....-++|++++. ..+.+....+++ ...++| +++.
T Consensus 127 s~~d~~g~~~v~r~l~gHtgylScC~f~dD~~-il-T~S--GD~TCalWDie~g~-~~~~f~GH~gDV~slsl~p~~~nt 201 (343)
T KOG0286|consen 127 STRDAEGNVRVSRELAGHTGYLSCCRFLDDNH-IL-TGS--GDMTCALWDIETGQ-QTQVFHGHTGDVMSLSLSPSDGNT 201 (343)
T ss_pred ccccccccceeeeeecCccceeEEEEEcCCCc-eE-ecC--CCceEEEEEcccce-EEEEecCCcccEEEEecCCCCCCe
Confidence 443211 11111122223443 55666554 43 222 23345667888742 223333333332 234556 4443
Q ss_pred EEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeC-CEEEEEEEeCCeeEEEEEecC
Q 004866 275 LYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCK-THMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 275 l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~l~ 347 (726)
|+...-+. ..+|+.+.. +.-..-+ +..+..|..+..+. +.-+.+..+++.-++ +|+.
T Consensus 202 -FvSg~cD~------~aklWD~R~------~~c~qtF-~ghesDINsv~ffP~G~afatGSDD~tcRl--yDlR 259 (343)
T KOG0286|consen 202 -FVSGGCDK------SAKLWDVRS------GQCVQTF-EGHESDINSVRFFPSGDAFATGSDDATCRL--YDLR 259 (343)
T ss_pred -EEeccccc------ceeeeeccC------cceeEee-cccccccceEEEccCCCeeeecCCCceeEE--Eeec
Confidence 33322221 234544322 1122222 33345677777775 455556677775555 4554
No 322
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.36 E-value=0.42 Score=52.13 Aligned_cols=133 Identities=17% Similarity=0.117 Sum_probs=74.8
Q ss_pred CCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccc-h--------------------HHHHHHHHCCcEEEEEccC
Q 004866 474 DGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW-R--------------------SELKSLLDRGWVVAFADVR 532 (726)
Q Consensus 474 dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~-~--------------------~~~~~l~~~G~~v~~~d~R 532 (726)
.+..+..|++...+ .....|+|+++-||||.+....+ . ..-..|.+. ..++.+|.+
T Consensus 48 ~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anllfiDqP 124 (433)
T PLN03016 48 ENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKM-ANIIFLDQP 124 (433)
T ss_pred CCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhc-CcEEEecCC
Confidence 35667776665543 23467999999999985431100 0 001223332 567888866
Q ss_pred CCCCCCCcccccccccCC-CCcHHHHHHHHH-HHHHcCCCCCCcEEEEEecccHHHHHHHHHc----C-----CC-ceeE
Q 004866 533 GGGGGGKKWHHDGRRTKK-LNSIKDFISCAR-FLIEKEIVKEHKLAGWGYSAGGLLVAAAINC----C-----PD-LFRA 600 (726)
Q Consensus 533 G~g~~g~~~~~~~~~~~~-~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~----~-----p~-~f~a 600 (726)
-+.||... ........ ....+|+...++ |+...+..-...+.|+|.||||..+-.++.+ . +. -+++
T Consensus 125 vGtGfSy~--~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkG 202 (433)
T PLN03016 125 VGSGFSYS--KTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQG 202 (433)
T ss_pred CCCCccCC--CCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCccccee
Confidence 55555422 11111111 112346655554 3434443345679999999999766555432 1 11 4788
Q ss_pred EEEeCCccccc
Q 004866 601 VVLEVPFLDAT 611 (726)
Q Consensus 601 ~v~~~p~~d~~ 611 (726)
++...|+++..
T Consensus 203 i~iGNg~t~~~ 213 (433)
T PLN03016 203 YMLGNPVTYMD 213 (433)
T ss_pred eEecCCCcCch
Confidence 89999987764
No 323
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=94.29 E-value=1.6 Score=42.82 Aligned_cols=179 Identities=18% Similarity=0.138 Sum_probs=91.9
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCC-----cEEEEEccCCCCCCCCccccccc-------ccCCCCcHHHH---
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRG-----WVVAFADVRGGGGGGKKWHHDGR-------RTKKLNSIKDF--- 557 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G-----~~v~~~d~RG~g~~g~~~~~~~~-------~~~~~~~~~D~--- 557 (726)
..|+ |++||.-|.. .++..++..|+.+| -.++.+|.-|+=..-........ ......+..|.
T Consensus 45 ~iPT-IfIhGsgG~a--sS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPT-IFIHGSGGTA--SSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccce-EEEecCCCCh--hHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 4565 4667654422 34566666666655 45777787775321111111100 01122334443
Q ss_pred -HHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcC------CCceeEEEEeCCcccccccccCCCCCCChhhhcccC
Q 004866 558 -ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC------PDLFRAVVLEVPFLDATNTLLYPILPLIAADYEEFG 630 (726)
Q Consensus 558 -~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~------p~~f~a~v~~~p~~d~~~~~~~~~~~~~~~~~~~~g 630 (726)
..+..+|.++-.+ .++=++||||||......+..+ |.+=+-+.+.+|+- ......+.. . ..+..-+
T Consensus 122 lk~~msyL~~~Y~i--~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN-~~~l~~de~--v--~~v~~~~ 194 (288)
T COG4814 122 LKKAMSYLQKHYNI--PKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN-VGNLVPDET--V--TDVLKDG 194 (288)
T ss_pred HHHHHHHHHHhcCC--ceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc-ccccCCCcc--h--heeeccC
Confidence 4566777766433 6899999999998887777653 55544444445543 111111111 1 1111112
Q ss_pred CC-CChhHHHHHHhcCcccccccCCCCCeEEEEecC------CCCcChHHHHHHHHHHHhcC
Q 004866 631 YP-GDIDDFHAIRNYSPYDNIQKDVLYPAVLVTSSF------NTRFGVWEAAKWVARVREST 685 (726)
Q Consensus 631 ~~-~~~~~~~~~~~~sp~~~i~~~~~~P~lli~g~~------D~~V~~~~~~~~~~~L~~~~ 685 (726)
.+ .....++++... +..+.+ ..-+|+|-|.. |-+||...+...+.-+...+
T Consensus 195 ~~~~~t~y~~y~~~n--~k~v~~--~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ 252 (288)
T COG4814 195 PGLIKTPYYDYIAKN--YKKVSP--NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNG 252 (288)
T ss_pred ccccCcHHHHHHHhc--ceeCCC--CcEEEEEecccccCCcCCCceechHhHHHHHHhccCc
Confidence 11 111122333221 111222 34467888763 56899989888888888775
No 324
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=94.13 E-value=0.17 Score=56.67 Aligned_cols=60 Identities=20% Similarity=0.262 Sum_probs=47.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEec
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTD 187 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~ 187 (726)
.+.++.+|||||||+-++ .++ .|++||+-||..+.... .....++.+||.|..|+-+..+
T Consensus 578 ritd~~FS~DgrWlisas-mD~----tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd 638 (910)
T KOG1539|consen 578 RITDMTFSPDGRWLISAS-MDS----TIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVD 638 (910)
T ss_pred ceeeeEeCCCCcEEEEee-cCC----cEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEec
Confidence 688899999999998774 334 59999999998765433 4456789999999999887544
No 325
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=93.93 E-value=0.67 Score=49.24 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=63.1
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCc
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDE 205 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~ 205 (726)
..+.|-| .||... ..| .++|+|.++...+.+-. ....+.+.++|||..|+..+.| ..||++.+.....
T Consensus 413 ~~fhpsg-~va~Gt-~~G----~w~V~d~e~~~lv~~~~d~~~ls~v~ysp~G~~lAvgs~d-----~~iyiy~Vs~~g~ 481 (626)
T KOG2106|consen 413 ADFHPSG-VVAVGT-ATG----RWFVLDTETQDLVTIHTDNEQLSVVRYSPDGAFLAVGSHD-----NHIYIYRVSANGR 481 (626)
T ss_pred eeccCcc-eEEEee-ccc----eEEEEecccceeEEEEecCCceEEEEEcCCCCEEEEecCC-----CeEEEEEECCCCc
Confidence 3578888 777764 445 47899999865554322 3345678999999999987544 3688887765542
Q ss_pred eeEEeeecCCceEEEEEEcCCCcEEEE
Q 004866 206 DALLLEESNENVYVNIRHTKDFHFVCV 232 (726)
Q Consensus 206 ~~lv~~~~d~~~~~~~~~s~Dg~~l~~ 232 (726)
....+..-...+...+.||+|+++|.-
T Consensus 482 ~y~r~~k~~gs~ithLDwS~Ds~~~~~ 508 (626)
T KOG2106|consen 482 KYSRVGKCSGSPITHLDWSSDSQFLVS 508 (626)
T ss_pred EEEEeeeecCceeEEeeecCCCceEEe
Confidence 222222222356677899999999863
No 326
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=93.91 E-value=8.8 Score=41.73 Aligned_cols=200 Identities=9% Similarity=-0.012 Sum_probs=104.9
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCC--EEEEEEecCCCCCceEEEEEcCC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQ--ALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~--~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
.++||+|..+.|..+. + .++++++.+-+...-.. ..+++.++.||-+. .+++-.-...+.+..|.++....
T Consensus 130 ~~qfs~dEsl~arlv~---n---ev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~ 203 (566)
T KOG2315|consen 130 VPQFSIDESLAARLVS---N---EVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPE 203 (566)
T ss_pred ccccccchhhhhhhhc---c---eEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEecccc
Confidence 3579999999888763 3 37888887643222111 44678889998744 33322223334555565555542
Q ss_pred CCceeEEeeecCCceE----EEEEEcCCCcEEEEEEcCC---------CceEEEEEeCCCCCCCeEEeeccCCceEEeee
Q 004866 203 TDEDALLLEESNENVY----VNIRHTKDFHFVCVHTFST---------TSSKVFLINAADPFSGLTLIWECEGLAHCIVE 269 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~----~~~~~s~Dg~~l~~~~~~~---------~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~ 269 (726)
......+ ....|| +...|.+-|.-|++.+... +.+.||+++..+ .....++......+.+.|+
T Consensus 204 ~~~~~~~---a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g-~s~~V~L~k~GPVhdv~W~ 279 (566)
T KOG2315|consen 204 EGQHQPV---ANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQG-ESVSVPLLKEGPVHDVTWS 279 (566)
T ss_pred ccccchh---hhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecC-ceEEEecCCCCCceEEEEC
Confidence 2111111 112233 5678999998876654321 236899999984 2222233222223455678
Q ss_pred ecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCC
Q 004866 270 HHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 270 ~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
+.+..|.++.---. .++-..++. .+..--+++.+ ..-.-+.+.++.|++..--+-...+-++|..+
T Consensus 280 ~s~~EF~VvyGfMP-------Akvtifnlr-----~~~v~df~egp-RN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n 345 (566)
T KOG2315|consen 280 PSGREFAVVYGFMP-------AKVTIFNLR-----GKPVFDFPEGP-RNTAFFNPHGNIILLAGFGNLPGDMEVWDVPN 345 (566)
T ss_pred CCCCEEEEEEeccc-------ceEEEEcCC-----CCEeEeCCCCC-ccceEECCCCCEEEEeecCCCCCceEEEeccc
Confidence 88888887754211 223334443 11111112222 22223455555666555444344677777654
No 327
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=93.90 E-value=6 Score=38.98 Aligned_cols=119 Identities=10% Similarity=0.019 Sum_probs=75.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+=.+.++.|.++|.-. +....+.+||+++|+.+..-. ...+..+.|+++|..++++....-.....|-..++.
T Consensus 54 avW~~Did~~s~~liTG-----SAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~ 128 (327)
T KOG0643|consen 54 AVWCCDIDWDSKHLITG-----SADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIR 128 (327)
T ss_pred eEEEEEecCCcceeeec-----cccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEcc
Confidence 34344567777776443 334569999999998776533 335667899999999998864444445567677765
Q ss_pred CCC------ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 202 STD------EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 202 t~~------~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
... +..+....++.. ....-|+|-+++|+....+ ..|-.+|+.++
T Consensus 129 ~~~~~~~s~ep~~kI~t~~sk-it~a~Wg~l~~~ii~Ghe~---G~is~~da~~g 179 (327)
T KOG0643|consen 129 DDSSDIDSEEPYLKIPTPDSK-ITSALWGPLGETIIAGHED---GSISIYDARTG 179 (327)
T ss_pred CChhhhcccCceEEecCCccc-eeeeeecccCCEEEEecCC---CcEEEEEcccC
Confidence 321 112222222222 2456799999998754433 35778888774
No 328
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=93.88 E-value=0.32 Score=50.29 Aligned_cols=100 Identities=13% Similarity=0.068 Sum_probs=68.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-c-----cccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-A-----VRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~-----~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
.+..+.+|+||..|.-. .+.+ .|-++|+.+.+...... . .....+.||||+++++--..+ ..||
T Consensus 343 ~vtSl~ls~~g~~lLss-sRDd----tl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~d-----gsv~ 412 (459)
T KOG0288|consen 343 RVTSLDLSMDGLELLSS-SRDD----TLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSAD-----GSVY 412 (459)
T ss_pred ceeeEeeccCCeEEeee-cCCC----ceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCC-----CcEE
Confidence 56778899999998765 3333 48899999988766432 1 135678999999987765433 3699
Q ss_pred EEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEE
Q 004866 197 CSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCV 232 (726)
Q Consensus 197 ~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~ 232 (726)
++++.+++-...+-......-...++|+|.|++|+-
T Consensus 413 iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Lls 448 (459)
T KOG0288|consen 413 IWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLS 448 (459)
T ss_pred EEEccCceEEEEeccCCCCcceEEEEEcCCCchhhc
Confidence 999988873222322222212346899999999863
No 329
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=93.83 E-value=2.9 Score=43.82 Aligned_cols=119 Identities=11% Similarity=0.100 Sum_probs=71.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+...++.|||-.++- |..+..|.|||+.++..+.... .+.+..+.|+.+|=+|+....|. .|.++||.
T Consensus 350 ~ts~~fHpDgLifgt-----gt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~-----~V~lwDLR 419 (506)
T KOG0289|consen 350 YTSAAFHPDGLIFGT-----GTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDG-----SVKLWDLR 419 (506)
T ss_pred eEEeeEcCCceEEec-----cCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCC-----eEEEEEeh
Confidence 445678888854432 3444579999999886443322 34667899999998887764332 38888886
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEee
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIW 258 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~ 258 (726)
... ....+.-.+..-...+.+...|++|.+. +..-.||..+-.+ ..++.+.
T Consensus 420 Kl~-n~kt~~l~~~~~v~s~~fD~SGt~L~~~---g~~l~Vy~~~k~~--k~W~~~~ 470 (506)
T KOG0289|consen 420 KLK-NFKTIQLDEKKEVNSLSFDQSGTYLGIA---GSDLQVYICKKKT--KSWTEIK 470 (506)
T ss_pred hhc-ccceeeccccccceeEEEcCCCCeEEee---cceeEEEEEeccc--ccceeee
Confidence 443 1112222221112456788899999876 2334566666544 4455443
No 330
>PLN02209 serine carboxypeptidase
Probab=93.78 E-value=0.69 Score=50.46 Aligned_cols=140 Identities=17% Similarity=0.134 Sum_probs=77.0
Q ss_pred EEEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccc-h--------------------HHHHHHHHCCcEE
Q 004866 468 YDVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRW-R--------------------SELKSLLDRGWVV 526 (726)
Q Consensus 468 ~~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~-~--------------------~~~~~l~~~G~~v 526 (726)
+.+....|..+-.|++.... .....|+|+++-||||.+..... . ..-..|.+. ..+
T Consensus 44 ~~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~-anl 120 (437)
T PLN02209 44 IGIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKT-ANI 120 (437)
T ss_pred EEecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhc-CcE
Confidence 33433445666666665443 23457999999999986522111 0 000133333 467
Q ss_pred EEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHH-HcCCCCCCcEEEEEecccHHHHHHHHHc----C-----CC
Q 004866 527 AFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLI-EKEIVKEHKLAGWGYSAGGLLVAAAINC----C-----PD 596 (726)
Q Consensus 527 ~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~-~~~~~d~~ri~i~G~S~GG~l~~~~~~~----~-----p~ 596 (726)
+.+|.+-+.||...-..... ..-....+|+...++... ..+......+.|+|.||||..+-.++.. . +.
T Consensus 121 lfiDqPvGtGfSy~~~~~~~-~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~ 199 (437)
T PLN02209 121 IFLDQPVGSGFSYSKTPIER-TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPP 199 (437)
T ss_pred EEecCCCCCCccCCCCCCCc-cCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCc
Confidence 88887766655422111011 111123466666555443 3343445689999999999765554431 1 11
Q ss_pred -ceeEEEEeCCccccc
Q 004866 597 -LFRAVVLEVPFLDAT 611 (726)
Q Consensus 597 -~f~a~v~~~p~~d~~ 611 (726)
-+++++...|++|..
T Consensus 200 inl~Gi~igng~td~~ 215 (437)
T PLN02209 200 INLQGYVLGNPITHIE 215 (437)
T ss_pred eeeeeEEecCcccChh
Confidence 368888888988753
No 331
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.75 E-value=0.32 Score=53.78 Aligned_cols=131 Identities=18% Similarity=0.231 Sum_probs=87.3
Q ss_pred EEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccch-HHHHHHHHCCcEEEEEccCCCCCC----CCcccc--cccccC
Q 004866 477 SVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWR-SELKSLLDRGWVVAFADVRGGGGG----GKKWHH--DGRRTK 549 (726)
Q Consensus 477 ~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~RG~g~~----g~~~~~--~~~~~~ 549 (726)
.|...+.+|.+. +++ .+..+-||+.......-. .....-+.+||+++.-|- ||.+. ...|.. ....++
T Consensus 16 ~i~fev~LP~~W--NgR--~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~df 90 (474)
T PF07519_consen 16 NIRFEVWLPDNW--NGR--FLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDF 90 (474)
T ss_pred eEEEEEECChhh--ccC--eEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHH
Confidence 777778888743 232 555555666544322110 013455678999999884 22222 122220 111234
Q ss_pred CCCcHHHHHHHHHHHHHcCC-CCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc
Q 004866 550 KLNSIKDFISCARFLIEKEI-VKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN 612 (726)
Q Consensus 550 ~~~~~~D~~~~~~~l~~~~~-~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 612 (726)
+...+.+...+.+.|++.-| ..|++-...|.|-||-.++.++-++|+.|.++|+.+|.+++..
T Consensus 91 a~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 91 AYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTH 154 (474)
T ss_pred HhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHH
Confidence 45566777778888887644 3688999999999999999999999999999999999887643
No 332
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=93.69 E-value=12 Score=40.34 Aligned_cols=150 Identities=9% Similarity=0.059 Sum_probs=87.1
Q ss_pred cccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-----ccc--ccccceeEEecCCCEEEEEE
Q 004866 113 QEAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-----KPQ--AVRVSNIAWAKDGQALIYVV 185 (726)
Q Consensus 113 ~~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-----~~~--~~~~~~~~WspDg~~l~y~~ 185 (726)
++.-.|+ .-.++.+++-|.|-+++- |+-.|++.+||+.+-.... +.. ...+.++.||+.|..|+...
T Consensus 160 Ei~l~hg-tk~Vsal~~Dp~GaR~~s-----Gs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvs 233 (641)
T KOG0772|consen 160 EIQLKHG-TKIVSALAVDPSGARFVS-----GSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVS 233 (641)
T ss_pred eEeccCC-ceEEEEeeecCCCceeee-----ccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEe
Confidence 3333444 778899999999998743 4556889999998753221 111 22457899999999998874
Q ss_pred ecCCCCCceEEEEEcCCCCceeEEeeecC----------C--ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCC
Q 004866 186 TDQNKRPYQIYCSIIGSTDEDALLLEESN----------E--NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSG 253 (726)
Q Consensus 186 ~~~~~~~~~l~~~~l~t~~~~~lv~~~~d----------~--~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~ 253 (726)
.. .+..++|.+.-+ .+-+-..| + .-.....|.|+.+..++++...++-.||-++ .....
T Consensus 234 g~-----aqakl~DRdG~~--~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~--~~k~q 304 (641)
T KOG0772|consen 234 GS-----AQAKLLDRDGFE--IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVN--NTKSQ 304 (641)
T ss_pred cC-----cceeEEccCCce--eeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecC--Cchhh
Confidence 32 123333322211 00010000 0 0011347999999999988877766666544 33344
Q ss_pred eEEeeccCC------ceEEeeeecCCEEEE
Q 004866 254 LTLIWECEG------LAHCIVEHHEGFLYL 277 (726)
Q Consensus 254 ~~~l~~~~~------~~~~~~~~~g~~l~~ 277 (726)
.+.+..+.. ...+.|++||..++-
T Consensus 305 ~qVik~k~~~g~Rv~~tsC~~nrdg~~iAa 334 (641)
T KOG0772|consen 305 LQVIKTKPAGGKRVPVTSCAWNRDGKLIAA 334 (641)
T ss_pred eeEEeeccCCCcccCceeeecCCCcchhhh
Confidence 445544332 234567788876443
No 333
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=93.69 E-value=2.1 Score=42.02 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=73.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECC-------CCceecc-c-cccccceeEEecCCCEEEEEEecCCCCCc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN-------SGALCSK-P-QAVRVSNIAWAKDGQALIYVVTDQNKRPY 193 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~-------tg~~~~~-~-~~~~~~~~~WspDg~~l~y~~~~~~~~~~ 193 (726)
.+....||++|++++++.|..=+....|.++|+. +.++... . .........|+|-++.|++.- ...
T Consensus 95 ~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Gh-----e~G 169 (327)
T KOG0643|consen 95 PVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGH-----EDG 169 (327)
T ss_pred eeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEec-----CCC
Confidence 4556679999999999988765556778999987 3332322 1 234667789999999998863 334
Q ss_pred eEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 194 QIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 194 ~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.|-++|+.++.+-+-.-++. ..-..++++|+|..+.+-. ...++.. ++|..+
T Consensus 170 ~is~~da~~g~~~v~s~~~h-~~~Ind~q~s~d~T~FiT~-s~Dttak--l~D~~t 221 (327)
T KOG0643|consen 170 SISIYDARTGKELVDSDEEH-SSKINDLQFSRDRTYFITG-SKDTTAK--LVDVRT 221 (327)
T ss_pred cEEEEEcccCceeeechhhh-ccccccccccCCcceEEec-ccCccce--eeeccc
Confidence 68888887764211110111 1122357889999986543 3333333 344444
No 334
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=93.68 E-value=0.29 Score=49.90 Aligned_cols=77 Identities=19% Similarity=0.149 Sum_probs=55.8
Q ss_pred CCcEEEeecccccc-----cCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeE
Q 004866 103 KIEQKLLDYNQEAE-----RFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIA 173 (726)
Q Consensus 103 ~~~~~lld~n~~~~-----~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~ 173 (726)
.++-+|+|...+.. .|.| .+..+++||||.+||-+++ .| .-|+|..+.+|+.+.... ...+.+++
T Consensus 152 ~GdV~l~d~~nl~~v~~I~aH~~--~lAalafs~~G~llATASe-KG---TVIRVf~v~~G~kl~eFRRG~~~~~IySL~ 225 (391)
T KOG2110|consen 152 SGDVVLFDTINLQPVNTINAHKG--PLAALAFSPDGTLLATASE-KG---TVIRVFSVPEGQKLYEFRRGTYPVSIYSLS 225 (391)
T ss_pred CceEEEEEcccceeeeEEEecCC--ceeEEEECCCCCEEEEecc-Cc---eEEEEEEcCCccEeeeeeCCceeeEEEEEE
Confidence 34566777654432 2332 6788899999999999875 45 369999999998765433 23667899
Q ss_pred EecCCCEEEEEE
Q 004866 174 WAKDGQALIYVV 185 (726)
Q Consensus 174 WspDg~~l~y~~ 185 (726)
|+||++.|..+.
T Consensus 226 Fs~ds~~L~~sS 237 (391)
T KOG2110|consen 226 FSPDSQFLAASS 237 (391)
T ss_pred ECCCCCeEEEec
Confidence 999999877764
No 335
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=93.62 E-value=0.096 Score=51.51 Aligned_cols=46 Identities=26% Similarity=0.187 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCC----CceeEEEE
Q 004866 558 ISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCP----DLFRAVVL 603 (726)
Q Consensus 558 ~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p----~~f~a~v~ 603 (726)
..|++|+.+.--..+++|.+.|||-||.+|..++...+ +++..++.
T Consensus 69 ~~A~~yl~~~~~~~~~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~ 118 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPGKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYS 118 (224)
T ss_pred HHHHHHHHHHHHhCCCCEEEEEechhhHHHHHHHHHccHHHhhheeEEEE
Confidence 45666665442223457999999999999999887643 34555553
No 336
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=93.43 E-value=2.3 Score=44.00 Aligned_cols=146 Identities=13% Similarity=0.111 Sum_probs=80.7
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc-ccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.++-+.|.|--.-+..+. |. .+++.+||+.||+.+.. .-.+.+.++.|+-||..|.-+..| .+|.++|..
T Consensus 133 rVg~V~wHPtA~NVLlsa---g~-Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckD-----KkvRv~dpr 203 (472)
T KOG0303|consen 133 RVGLVQWHPTAPNVLLSA---GS-DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKD-----KKVRVIDPR 203 (472)
T ss_pred eEEEEeecccchhhHhhc---cC-CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeeccc-----ceeEEEcCC
Confidence 567778888777766653 22 35799999999986643 225677889999999988766544 367777776
Q ss_pred CCCceeEEeeecC--CceEEEEEEcCCCcEEEEEEcC-CCceEEEEEeCCCCCCC--eEEeeccCCceEEeeeecCCEEE
Q 004866 202 STDEDALLLEESN--ENVYVNIRHTKDFHFVCVHTFS-TTSSKVFLINAADPFSG--LTLIWECEGLAHCIVEHHEGFLY 276 (726)
Q Consensus 202 t~~~~~lv~~~~d--~~~~~~~~~s~Dg~~l~~~~~~-~~~~~l~~~d~~~~~~~--~~~l~~~~~~~~~~~~~~g~~l~ 276 (726)
++. ++.+... +.--..+-|-.+|+ |+-+--+ .+..++-++|...-... ...+....+....+.++|.+.+|
T Consensus 204 ~~~---~v~e~~~heG~k~~Raifl~~g~-i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivY 279 (472)
T KOG0303|consen 204 RGT---VVSEGVAHEGAKPARAIFLASGK-IFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVY 279 (472)
T ss_pred CCc---EeeecccccCCCcceeEEeccCc-eeeeccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEE
Confidence 653 2222110 00112244566777 3322222 23355666665442211 12222222223345566666666
Q ss_pred EEecC
Q 004866 277 LFTDA 281 (726)
Q Consensus 277 ~~t~~ 281 (726)
+..-.
T Consensus 280 l~GKG 284 (472)
T KOG0303|consen 280 LCGKG 284 (472)
T ss_pred EEecC
Confidence 65443
No 337
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=93.35 E-value=12 Score=43.28 Aligned_cols=207 Identities=13% Similarity=0.058 Sum_probs=106.9
Q ss_pred EeeceeeCCCCCEEEEEE----------------------eCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCC
Q 004866 123 YEELSEVSPDHKFLAYTM----------------------YDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQ 179 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~----------------------~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~ 179 (726)
.+...+|||+|+.+++.. +..|.+..+++++|.++ ....... ...+..+.|.+|++
T Consensus 102 ~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~ 180 (620)
T COG1506 102 GVSDARWSPDGDRIAFLTAEGASKRDGGDHLFVDRLPVWFDGRGGERSDLYVVDIES-KLIKLGLGNLDVVSFATDGDGR 180 (620)
T ss_pred ccccceeCCCCCeEEEEecccccccCCceeeeecccceeecCCCCcccceEEEccCc-ccccccCCCCceeeeeeCCCCc
Confidence 456778999999998821 11122456777777766 2222211 33455677777778
Q ss_pred EEEEEEecCCCCC--ceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCC-----ceEEEEEeCCCCCC
Q 004866 180 ALIYVVTDQNKRP--YQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTT-----SSKVFLINAADPFS 252 (726)
Q Consensus 180 ~l~y~~~~~~~~~--~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~-----~~~l~~~d~~~~~~ 252 (726)
.++.........+ ...+.....++.. ....+.......+.+.+||+.+.+...... ...+++++.+. +
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~gk~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 255 (620)
T COG1506 181 LVASIRLDDDADPWVTNLYVLIEGNGEL---ESLTPGEGSISKLAFDADGKSIALLGTESDRGLAEGDFILLLDGEL--G 255 (620)
T ss_pred eeEEeeeccccCCceEeeEEEecCCCce---EEEcCCCceeeeeeeCCCCCeeEEeccCCccCccccceEEEEeccc--c
Confidence 7877766543111 1222222222222 111223333456788999998877765433 24566666222 1
Q ss_pred CeEEeeccCC---c-eEEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCE
Q 004866 253 GLTLIWECEG---L-AHCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTH 328 (726)
Q Consensus 253 ~~~~l~~~~~---~-~~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~ 328 (726)
.........+ + ......-++..+++++..... ...++..... . .. ..+. ..+...+..++..++.
T Consensus 256 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~l~~~~~~-~--~~--~~~~-~~~~~~v~~f~~~~~~ 324 (620)
T COG1506 256 EVDGDLSSGDDTRGAWAVEGGLDGDGLLFIATDGGG-----SSPLFRVDDL-G--GG--VEGL-SGDDGGVPGFDVDGRK 324 (620)
T ss_pred ccceeeccCCcccCcHHhccccCCCcEEEEEecCCC-----ceEEEEEecc-C--Cc--eeee-cCCCceEEEEeeCCCE
Confidence 1111111110 0 000111356667776665321 3556665532 1 11 2222 2233567777777788
Q ss_pred EEEEEEeCCe-eEEEEEec
Q 004866 329 MALILREGRT-YRLCSVSL 346 (726)
Q Consensus 329 lv~~~~~~g~-~~l~~~~l 346 (726)
+++....... +++++++.
T Consensus 325 ~~~~~s~~~~p~~i~~~~~ 343 (620)
T COG1506 325 LALAYSSPTEPPEIYLYDR 343 (620)
T ss_pred EEEEecCCCCccceEEEcC
Confidence 8888777664 57887764
No 338
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=93.35 E-value=0.79 Score=50.27 Aligned_cols=58 Identities=22% Similarity=0.202 Sum_probs=43.9
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYV 184 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~ 184 (726)
+..+.++++-|||..|.... |+ .++++|+..|..++... .+.+..++||.||+.++-.
T Consensus 12 ~hci~d~afkPDGsqL~lAA---g~---rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG 71 (1081)
T KOG1538|consen 12 EHCINDIAFKPDGTQLILAA---GS---RLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASG 71 (1081)
T ss_pred ccchheeEECCCCceEEEec---CC---EEEEEeCCCcccccccccccceEEEEEEccCCceeccC
Confidence 33567788999999998874 33 49999999987665432 4567789999999977543
No 339
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=93.25 E-value=2.3 Score=45.18 Aligned_cols=73 Identities=12% Similarity=-0.017 Sum_probs=50.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+..++||++|+.+.-++ .+ ..|.+||++||..+.-.. ......+.+-||+..+|+.-. ...+|..+|+.
T Consensus 260 ~Vrd~~~s~~g~~fLS~s-fD----~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~----sd~ki~~wDiR 330 (503)
T KOG0282|consen 260 PVRDASFNNCGTSFLSAS-FD----RFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGG----SDKKIRQWDIR 330 (503)
T ss_pred hhhhhhccccCCeeeeee-cc----eeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEec----CCCcEEEEecc
Confidence 466778999999875543 22 359999999998775433 334466889999977777643 22367777776
Q ss_pred CCC
Q 004866 202 STD 204 (726)
Q Consensus 202 t~~ 204 (726)
+++
T Consensus 331 s~k 333 (503)
T KOG0282|consen 331 SGK 333 (503)
T ss_pred chH
Confidence 653
No 340
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=93.24 E-value=3.9 Score=40.79 Aligned_cols=111 Identities=9% Similarity=0.047 Sum_probs=70.5
Q ss_pred EeeceeeCC-CCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSP-DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SP-DG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+..+.+|| |++..+-. |-+ ..-++||+..|..++... ...+..+.|-|+|..|+--+.| ....++|
T Consensus 188 DV~slsl~p~~~ntFvSg----~cD-~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD-----~tcRlyD 257 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSG----GCD-KSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDD-----ATCRLYD 257 (343)
T ss_pred cEEEEecCCCCCCeEEec----ccc-cceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCC-----ceeEEEe
Confidence 566778999 88865432 222 246899999997776543 3467789999999877654322 2455667
Q ss_pred cCCCCceeEEeeecCCce-EEEEEEcCCCcEEEEEEcCCCceEEEEEeC
Q 004866 200 IGSTDEDALLLEESNENV-YVNIRHTKDFHFVCVHTFSTTSSKVFLINA 247 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~-~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 247 (726)
|...+ ...+|+.....+ ..++.+|..||.|+....+ ....++|.
T Consensus 258 lRaD~-~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d---~~c~vWDt 302 (343)
T KOG0286|consen 258 LRADQ-ELAVYSHDSIICGITSVAFSKSGRLLFAGYDD---FTCNVWDT 302 (343)
T ss_pred ecCCc-EEeeeccCcccCCceeEEEcccccEEEeeecC---CceeEeec
Confidence 76653 455676433322 2578999999988754322 23445554
No 341
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.21 E-value=2.3 Score=41.58 Aligned_cols=102 Identities=18% Similarity=0.118 Sum_probs=56.0
Q ss_pred CCCCccEEEEEcCCCCCCCCccchHHHHHHHH-CC--cEEEEEccCCCCCCCCccccccccc-CCCCcHHHHHHHHHHHH
Q 004866 490 KENQNPGLLHGHGAYGELLDKRWRSELKSLLD-RG--WVVAFADVRGGGGGGKKWHHDGRRT-KKLNSIKDFISCARFLI 565 (726)
Q Consensus 490 ~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~-~G--~~v~~~d~RG~g~~g~~~~~~~~~~-~~~~~~~D~~~~~~~l~ 565 (726)
.....|+|+++-|.||.. .-|......|.. .+ .-|..+-.-|+-.....-.++.... ...-+.+|.+.=--..+
T Consensus 25 ~~~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFi 102 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFI 102 (301)
T ss_pred CCCCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHH
Confidence 345679999999998843 223333333332 22 3344444444444332222222221 12234555544322333
Q ss_pred HcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 566 EKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 566 ~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
++-.....||.++|||-|+||++.++..
T Consensus 103 k~~~Pk~~ki~iiGHSiGaYm~Lqil~~ 130 (301)
T KOG3975|consen 103 KEYVPKDRKIYIIGHSIGAYMVLQILPS 130 (301)
T ss_pred HHhCCCCCEEEEEecchhHHHHHHHhhh
Confidence 3333344799999999999999999873
No 342
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=93.14 E-value=1.3 Score=50.03 Aligned_cols=101 Identities=10% Similarity=-0.050 Sum_probs=66.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+-++.||-++-.|--++|+ ++++|++...+-+.+.. .+.+..++|.|-....|.+-.- ..+|.++.|-
T Consensus 371 DILDlSWSKn~fLLSSSMDK------TVRLWh~~~~~CL~~F~HndfVTcVaFnPvDDryFiSGSL----D~KvRiWsI~ 440 (712)
T KOG0283|consen 371 DILDLSWSKNNFLLSSSMDK------TVRLWHPGRKECLKVFSHNDFVTCVAFNPVDDRYFISGSL----DGKVRLWSIS 440 (712)
T ss_pred hheecccccCCeeEeccccc------cEEeecCCCcceeeEEecCCeeEEEEecccCCCcEeeccc----ccceEEeecC
Confidence 45567899988777655543 58999999888777655 5567889999966666555322 2467777774
Q ss_pred CCCceeEEeeecCC-ceEEEEEEcCCCcEEEEEEcCC
Q 004866 202 STDEDALLLEESNE-NVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 202 t~~~~~lv~~~~d~-~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
.. .+++. .|- .....++++|||++.++.+-.+
T Consensus 441 d~---~Vv~W-~Dl~~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 441 DK---KVVDW-NDLRDLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred cC---eeEee-hhhhhhheeEEeccCCceEEEEEecc
Confidence 32 22321 121 2234678899999988876543
No 343
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=93.12 E-value=5.1 Score=40.21 Aligned_cols=114 Identities=15% Similarity=0.056 Sum_probs=70.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc----c-ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----Q-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~----~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
-+..+++.|.|.+|+...+. ..++++|++|-+...-. . .+.+..+.+|+.|+ ||.+...+ ..|.+
T Consensus 218 ~vrsiSfHPsGefllvgTdH-----p~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~-lYvTaSkD----G~Ikl 287 (430)
T KOG0640|consen 218 PVRSISFHPSGEFLLVGTDH-----PTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGS-LYVTASKD----GAIKL 287 (430)
T ss_pred eeeeEeecCCCceEEEecCC-----CceeEEeccceeEeeecCcccccccceeEEEecCCcc-EEEEeccC----CcEEe
Confidence 45667899999999987654 35899999886543211 1 34567788999885 77775432 24555
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+|=-++.--..+-...+..-..+..+++|||||+ .++-.+-++++.+.+
T Consensus 288 wDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiL---sSG~DS~vkLWEi~t 336 (430)
T KOG0640|consen 288 WDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYIL---SSGKDSTVKLWEIST 336 (430)
T ss_pred eccccHHHHHHHHhhcCCceeeeEEEccCCeEEe---ecCCcceeeeeeecC
Confidence 5532222101111122333446778999999986 333445677777766
No 344
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.11 E-value=0.47 Score=48.93 Aligned_cols=110 Identities=19% Similarity=0.207 Sum_probs=66.7
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHH--CCcEEEEEccCCCCC-CCCcccccccccCCCCcHHHHHHHHHHHHHcCCCC
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLD--RGWVVAFADVRGGGG-GGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVK 571 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~--~G~~v~~~d~RG~g~-~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d 571 (726)
-+++++||- .......-...+|-..+ .-.+.+.+-++-.|. .|..+ .+..-..+..++...+++|.+..-.
T Consensus 117 ~vlvFvHGf-Nntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~----DreS~~~Sr~aLe~~lr~La~~~~~- 190 (377)
T COG4782 117 TVLVFVHGF-NNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNY----DRESTNYSRPALERLLRYLATDKPV- 190 (377)
T ss_pred eEEEEEccc-CCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeeccc----chhhhhhhHHHHHHHHHHHHhCCCC-
Confidence 488999973 32222211222333333 334555566664442 11111 1111224678888899999877543
Q ss_pred CCcEEEEEecccHHHHHHHHHc--------CCCceeEEEEeCCccccc
Q 004866 572 EHKLAGWGYSAGGLLVAAAINC--------CPDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 572 ~~ri~i~G~S~GG~l~~~~~~~--------~p~~f~a~v~~~p~~d~~ 611 (726)
.+|.|+.||||.++++.++-+ .+..|+-+|+.+|=+|.-
T Consensus 191 -~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 191 -KRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred -ceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 799999999999999887654 234578888888877653
No 345
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=93.07 E-value=8.4 Score=39.82 Aligned_cols=113 Identities=9% Similarity=0.048 Sum_probs=63.8
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc----c-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----Q-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~----~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
++.||| +.+..-..|+=...|+++...+|...... . ...+..+.|||..+.++.+..-+ ..|.+.|+
T Consensus 216 ~LdWSp----~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~D----gsIrIWDi 287 (440)
T KOG0302|consen 216 GLDWSP----IKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCD----GSIRIWDI 287 (440)
T ss_pred eeeccc----ccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecC----ceEEEEEe
Confidence 457898 23332233544567999999988654322 1 23567799999999999876432 25667777
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+++....++........--++|+.+-..|+. - +....+.++||..
T Consensus 288 Rs~~~~~~~~~kAh~sDVNVISWnr~~~lLas-G--~DdGt~~iwDLR~ 333 (440)
T KOG0302|consen 288 RSGPKKAAVSTKAHNSDVNVISWNRREPLLAS-G--GDDGTLSIWDLRQ 333 (440)
T ss_pred cCCCccceeEeeccCCceeeEEccCCcceeee-c--CCCceEEEEEhhh
Confidence 77653323332221211112677766553332 2 2233466667654
No 346
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=92.97 E-value=2.2 Score=45.70 Aligned_cols=148 Identities=9% Similarity=0.026 Sum_probs=86.6
Q ss_pred eEEeece--eeCCCCCEEEEEEeCCC---Cc---EEEEEEEECCCCceeccc--cccccceeEEecCCCEEEEEEecCCC
Q 004866 121 YAYEELS--EVSPDHKFLAYTMYDKD---ND---YFTLSVRNLNSGALCSKP--QAVRVSNIAWAKDGQALIYVVTDQNK 190 (726)
Q Consensus 121 ~~~~~~~--~~SPDG~~la~~~~~~g---~e---~~~l~v~dl~tg~~~~~~--~~~~~~~~~WspDg~~l~y~~~~~~~ 190 (726)
++.++++ .|.+.|++|.+.+.+.- .. .++||+.++... -.++. ..+.+.++.|.|+++.+....- -
T Consensus 220 lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~-~i~V~~~~~~pVhdf~W~p~S~~F~vi~g---~ 295 (561)
T COG5354 220 LFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITER-SIPVEKDLKDPVHDFTWEPLSSRFAVISG---Y 295 (561)
T ss_pred eEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccc-ccceeccccccceeeeecccCCceeEEec---c
Confidence 4445543 69999999998765432 11 257999999743 33322 2556789999999999988751 1
Q ss_pred CCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeec--cCCceEEee
Q 004866 191 RPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWE--CEGLAHCIV 268 (726)
Q Consensus 191 ~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~~~~~ 268 (726)
.+..+-.+++.+. +++--+...-. .+.+||.++||++..-......+-++|..+ ..+.+.. ...-..+.|
T Consensus 296 ~pa~~s~~~lr~N----l~~~~Pe~~rN-T~~fsp~~r~il~agF~nl~gni~i~~~~~---rf~~~~~~~~~n~s~~~w 367 (561)
T COG5354 296 MPASVSVFDLRGN----LRFYFPEQKRN-TIFFSPHERYILFAGFDNLQGNIEIFDPAG---RFKVAGAFNGLNTSYCDW 367 (561)
T ss_pred cccceeecccccc----eEEecCCcccc-cccccCcccEEEEecCCccccceEEeccCC---ceEEEEEeecCCceEeec
Confidence 2345666666542 23222211110 245799999999877665555555666654 3333322 112223457
Q ss_pred eecCCEEEEEec
Q 004866 269 EHHEGFLYLFTD 280 (726)
Q Consensus 269 ~~~g~~l~~~t~ 280 (726)
++|+..++.-+.
T Consensus 368 spd~qF~~~~~t 379 (561)
T COG5354 368 SPDGQFYDTDTT 379 (561)
T ss_pred cCCceEEEecCC
Confidence 777775554443
No 347
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=92.95 E-value=0.5 Score=60.02 Aligned_cols=98 Identities=17% Similarity=0.129 Sum_probs=65.0
Q ss_pred cEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCc
Q 004866 495 PGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHK 574 (726)
Q Consensus 495 P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~r 574 (726)
|.++++||+.+.. ..|......| ..++.|+.++.+|.+.. .....+++++.+.+...+..-. ...+
T Consensus 1069 ~~l~~lh~~~g~~--~~~~~l~~~l-~~~~~v~~~~~~g~~~~----------~~~~~~l~~la~~~~~~i~~~~-~~~p 1134 (1296)
T PRK10252 1069 PTLFCFHPASGFA--WQFSVLSRYL-DPQWSIYGIQSPRPDGP----------MQTATSLDEVCEAHLATLLEQQ-PHGP 1134 (1296)
T ss_pred CCeEEecCCCCch--HHHHHHHHhc-CCCCcEEEEECCCCCCC----------CCCCCCHHHHHHHHHHHHHhhC-CCCC
Confidence 5688889876643 3455555555 45799999999988632 0112466666665544443311 1257
Q ss_pred EEEEEecccHHHHHHHHHc---CCCceeEEEEeCC
Q 004866 575 LAGWGYSAGGLLVAAAINC---CPDLFRAVVLEVP 606 (726)
Q Consensus 575 i~i~G~S~GG~l~~~~~~~---~p~~f~a~v~~~p 606 (726)
..++|+|+||.++..++.+ .++....+++..+
T Consensus 1135 ~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~ 1169 (1296)
T PRK10252 1135 YHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDT 1169 (1296)
T ss_pred EEEEEechhhHHHHHHHHHHHHcCCceeEEEEecC
Confidence 9999999999999998875 4777777776554
No 348
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=92.81 E-value=0.24 Score=48.75 Aligned_cols=20 Identities=35% Similarity=0.484 Sum_probs=17.6
Q ss_pred CcEEEEEecccHHHHHHHHH
Q 004866 573 HKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~ 592 (726)
.+|.++|||+||.++-.++.
T Consensus 78 ~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 78 RKISFIGHSLGGLIARYALG 97 (217)
T ss_pred ccceEEEecccHHHHHHHHH
Confidence 58999999999999877765
No 349
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=92.56 E-value=15 Score=39.11 Aligned_cols=113 Identities=11% Similarity=0.076 Sum_probs=66.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
.+..+.|+-||..||+.. .+| .+.+|+..++....+.. .+.+..+.|..+|.+|+-...|. .+.++|.-
T Consensus 237 dVT~L~Wn~~G~~LatG~-~~G----~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~-----ttilwd~~ 306 (524)
T KOG0273|consen 237 DVTSLDWNNDGTLLATGS-EDG----EARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDG-----TTILWDAH 306 (524)
T ss_pred CcceEEecCCCCeEEEee-cCc----EEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCc-----cEEEEecc
Confidence 467789999999999985 445 48899987765444433 55678899999999887654332 45666765
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
++.. ...|+....+ -+++.|-.+.++. ++.....-.||.++.+.
T Consensus 307 ~g~~-~q~f~~~s~~-~lDVdW~~~~~F~--ts~td~~i~V~kv~~~~ 350 (524)
T KOG0273|consen 307 TGTV-KQQFEFHSAP-ALDVDWQSNDEFA--TSSTDGCIHVCKVGEDR 350 (524)
T ss_pred CceE-EEeeeeccCC-ccceEEecCceEe--ecCCCceEEEEEecCCC
Confidence 5531 1222222111 1345565444432 22222223455555544
No 350
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=92.42 E-value=1.5 Score=47.68 Aligned_cols=140 Identities=17% Similarity=0.070 Sum_probs=81.4
Q ss_pred EEECCCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHH----------------HHHHHCCcEEEEEccC
Q 004866 469 DVPSHDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSEL----------------KSLLDRGWVVAFADVR 532 (726)
Q Consensus 469 ~~~s~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~----------------~~l~~~G~~v~~~d~R 532 (726)
.+....|..+..|++-... .....|+||++-||||-+.-.+...+. -.|-+ =-.++..|-+
T Consensus 50 ~v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk-~aNiLfLd~P 126 (454)
T KOG1282|consen 50 TVNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNK-EANILFLDQP 126 (454)
T ss_pred ECCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccc-cccEEEEecC
Confidence 3444568889888876653 224569999999999854211211110 01111 1346777777
Q ss_pred CCCCCCCcccccccccCCCCcHHHHHH-HHHHHHHcCCCCCCcEEEEEecccHHHHHHHH----HcC-----CC-ceeEE
Q 004866 533 GGGGGGKKWHHDGRRTKKLNSIKDFIS-CARFLIEKEIVKEHKLAGWGYSAGGLLVAAAI----NCC-----PD-LFRAV 601 (726)
Q Consensus 533 G~g~~g~~~~~~~~~~~~~~~~~D~~~-~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~----~~~-----p~-~f~a~ 601 (726)
-+.||.-.=........-....+|... ..+|+.+.+.--.....|.|-||+|..+-++| ... |. -+|+.
T Consensus 127 vGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 127 VGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 655543221111111112233455544 45677777766678999999999996554444 322 21 37899
Q ss_pred EEeCCccccc
Q 004866 602 VLEVPFLDAT 611 (726)
Q Consensus 602 v~~~p~~d~~ 611 (726)
+...|++|..
T Consensus 207 ~IGNg~td~~ 216 (454)
T KOG1282|consen 207 AIGNGLTDPE 216 (454)
T ss_pred EecCcccCcc
Confidence 9999988754
No 351
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=92.33 E-value=0.67 Score=50.48 Aligned_cols=62 Identities=27% Similarity=0.233 Sum_probs=45.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCcee-cccc---ccccceeEEecCCCEEEEEEecCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC-SKPQ---AVRVSNIAWAKDGQALIYVVTDQN 189 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~-~~~~---~~~~~~~~WspDg~~l~y~~~~~~ 189 (726)
++-+++|||||+++|-+. .+| .|+|++..+++.. .... ..+-..+.|.=||+.|+.+.++..
T Consensus 722 qIf~~AWSpdGr~~AtVc-KDg----~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~ 787 (1012)
T KOG1445|consen 722 QIFGIAWSPDGRRIATVC-KDG----TLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKS 787 (1012)
T ss_pred ceeEEEECCCCcceeeee-cCc----eEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEeccccc
Confidence 566789999999999875 455 4999999988632 2211 224456899999999999877653
No 352
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=92.30 E-value=1.1 Score=49.74 Aligned_cols=114 Identities=9% Similarity=0.078 Sum_probs=66.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEE--EE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY--CS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~--~~ 198 (726)
.+..++|||||+++|-... |. ...+.||+++....+.... .-++..++|+|-+++|.-...... .--.+| +.
T Consensus 80 ~~t~vAfS~~GryvatGEc--G~-~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp~~kyvvSVGsQHD-MIVnv~dWr~ 155 (1080)
T KOG1408|consen 80 PLTCVAFSQNGRYVATGEC--GR-TPASKVWSLAFHGVVAEFVDHKYNVTCVAFSPGNKYVVSVGSQHD-MIVNVNDWRV 155 (1080)
T ss_pred ceeEEEEcCCCcEEEeccc--CC-CccceeeeeccccchhhhhhccccceeeeecCCCcEEEeeccccc-eEEEhhhhhh
Confidence 4667789999999988742 22 3568999999876554333 335678999999998864422111 001122 32
Q ss_pred EcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 199 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 199 ~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
++..... .+ ......+++|.||.|.+-..+++ -.+|.++...
T Consensus 156 N~~~asn--ki-----ss~Vsav~fsEdgSYfvT~gnrH--vk~wyl~~~~ 197 (1080)
T KOG1408|consen 156 NSSGASN--KI-----SSVVSAVAFSEDGSYFVTSGNRH--VKLWYLQIQS 197 (1080)
T ss_pred ccccccc--cc-----ceeEEEEEEccCCceeeeeeeee--EEEEEeeccc
Confidence 3211110 01 11123467899999876554432 4567666654
No 353
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.05 E-value=11 Score=46.46 Aligned_cols=113 Identities=13% Similarity=0.079 Sum_probs=65.4
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----------------ccccceeEEecCCCEEEEEEecCC
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----------------AVRVSNIAWAKDGQALIYVVTDQN 189 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----------------~~~~~~~~WspDg~~l~y~~~~~~ 189 (726)
++.++|++..| |+.+..+ ..|+++|+.+|....... .....+++++|||+.||++...
T Consensus 687 gVa~dp~~g~L-yVad~~~---~~I~v~d~~~g~v~~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~-- 760 (1057)
T PLN02919 687 DVCFEPVNEKV-YIAMAGQ---HQIWEYNISDGVTRVFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSE-- 760 (1057)
T ss_pred EEEEecCCCeE-EEEECCC---CeEEEEECCCCeEEEEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECC--
Confidence 35789977765 4445433 358999998775432110 0123458899999999887432
Q ss_pred CCCceEEEEEcCCCCceeEEeee------------cCC-------ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 190 KRPYQIYCSIIGSTDEDALLLEE------------SNE-------NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 190 ~~~~~l~~~~l~t~~~~~lv~~~------------~d~-------~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.++|+++++.++....+.... .+. ....++.+++||+ |++... ....|.++|.++
T Consensus 761 --n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~-LYVADs--~N~rIrviD~~t 834 (1057)
T PLN02919 761 --SSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ-IYVADS--YNHKIKKLDPAT 834 (1057)
T ss_pred --CCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCc-EEEEEC--CCCEEEEEECCC
Confidence 357888888765421111000 000 0113567889997 444432 245688888876
No 354
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=91.89 E-value=1.6 Score=43.74 Aligned_cols=61 Identities=18% Similarity=0.170 Sum_probs=43.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQ 188 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~ 188 (726)
.+..++||.|+..|.-.+ -..++++--+.+|+.+.... ...+....|++||..|.-.+.|.
T Consensus 308 Gvt~l~FSrD~SqiLS~s-----fD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 308 GVTCLSFSRDNSQILSAS-----FDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred CeeEEEEccCcchhhccc-----ccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 355678999999885432 23578999999998776533 22456678999999987765553
No 355
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=91.61 E-value=33 Score=41.58 Aligned_cols=148 Identities=12% Similarity=0.081 Sum_probs=82.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEE----ECCCCceecccc-ccccceeEEecCCCEEEEEEecCCC----CCc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVR----NLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNK----RPY 193 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~----dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~----~~~ 193 (726)
.+-++.+-+|...|.++. .+| +|.+. +..+.+.-.+.. ..++..++||||+..|+++.....- +..
T Consensus 77 ~ivs~~yl~d~~~l~~~~-~~G----di~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~f 151 (928)
T PF04762_consen 77 KIVSFQYLADSESLCIAL-ASG----DIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRDF 151 (928)
T ss_pred cEEEEEeccCCCcEEEEE-CCc----eEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEeccc
Confidence 456677888998887775 455 36677 555554333333 5578889999999999888643210 000
Q ss_pred e-EE-------------EEEcCCCCceeE------------------------EeeecCCceEEEEEEcCCCcEEEEEEc
Q 004866 194 Q-IY-------------CSIIGSTDEDAL------------------------LLEESNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 194 ~-l~-------------~~~l~t~~~~~l------------------------v~~~~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
+ |. -+.+|=|++++. ... .|+ .-+.++|-.||+|+++++-
T Consensus 152 d~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd-~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 152 DPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDD-GRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred eEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCC-CceEEEECCCCcEEEEEEE
Confidence 0 10 111221110000 000 111 2357899999999999886
Q ss_pred C--CC-ceEEEEEeCCCCCCCeEEeeccCCceE--EeeeecCCEEEEEec
Q 004866 236 S--TT-SSKVFLINAADPFSGLTLIWECEGLAH--CIVEHHEGFLYLFTD 280 (726)
Q Consensus 236 ~--~~-~~~l~~~d~~~~~~~~~~l~~~~~~~~--~~~~~~g~~l~~~t~ 280 (726)
. .+ ...+.+++-++ .+.-.....++.+ ..|.|.|..++-...
T Consensus 230 ~~~~~~~R~iRVy~ReG---~L~stSE~v~gLe~~l~WrPsG~lIA~~q~ 276 (928)
T PF04762_consen 230 EPETGSRRVIRVYSREG---ELQSTSEPVDGLEGALSWRPSGNLIASSQR 276 (928)
T ss_pred EcCCCceeEEEEECCCc---eEEeccccCCCccCCccCCCCCCEEEEEEE
Confidence 2 23 35677776653 4444444444443 245577775554443
No 356
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=91.60 E-value=1.4 Score=51.02 Aligned_cols=98 Identities=14% Similarity=0.059 Sum_probs=56.9
Q ss_pred CEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEE-EEcCC--CceEEEEEeCCCCCCCeE
Q 004866 179 QALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCV-HTFST--TSSKVFLINAADPFSGLT 255 (726)
Q Consensus 179 ~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~-~~~~~--~~~~l~~~d~~~~~~~~~ 255 (726)
..|+|... .+ .+|.+.|.......++-.+.... ...+.|||||++|++ ++-++ +.+.||+.+|.+....+.
T Consensus 319 tkiAfv~~-~~---~~L~~~D~dG~n~~~ve~~~~~~--i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~v 392 (912)
T TIGR02171 319 AKLAFRND-VT---GNLAYIDYTKGASRAVEIEDTIS--VYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLV 392 (912)
T ss_pred eeEEEEEc-CC---CeEEEEecCCCCceEEEecCCCc--eecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCce
Confidence 45777642 11 27888888765443331332222 246899999999999 55555 578899999988554443
Q ss_pred EeeccCC-ceEEeeeecCCE-EEEEecCc
Q 004866 256 LIWECEG-LAHCIVEHHEGF-LYLFTDAA 282 (726)
Q Consensus 256 ~l~~~~~-~~~~~~~~~g~~-l~~~t~~~ 282 (726)
.|.-... -...-+-..|++ +.++++.+
T Consensus 393 kl~ve~aaiprwrv~e~gdt~ivyv~~a~ 421 (912)
T TIGR02171 393 KLPVENAAIPRWRVLENGDTVIVYVSDAS 421 (912)
T ss_pred EeecccccccceEecCCCCeEEEEEcCCC
Confidence 3321111 112233345554 66666644
No 357
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=91.50 E-value=22 Score=37.92 Aligned_cols=56 Identities=20% Similarity=0.153 Sum_probs=39.9
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYV 184 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~ 184 (726)
+..+.-||+|.+|+-+. ..| +||+|.+.||+.+.... -..+.-+.|+.||+.|+-.
T Consensus 84 v~al~s~n~G~~l~ag~-i~g----~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTg 141 (476)
T KOG0646|consen 84 VHALASSNLGYFLLAGT-ISG----NLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITG 141 (476)
T ss_pred eeeeecCCCceEEEeec-ccC----cEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEec
Confidence 45567799999987652 334 49999999998775432 2245668899999877544
No 358
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=91.49 E-value=0.28 Score=52.89 Aligned_cols=88 Identities=13% Similarity=0.140 Sum_probs=53.2
Q ss_pred cchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHH
Q 004866 511 RWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAA 590 (726)
Q Consensus 511 ~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~ 590 (726)
.|...++.|.+.||..- .+++|. +-.|+.+.. .....+..+...++.+.+.. ..+|.|+||||||.++...
T Consensus 66 ~~~~li~~L~~~GY~~~-~~l~~~---pYDWR~~~~--~~~~~~~~lk~~ie~~~~~~---~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRG-KDLFAA---PYDWRLSPA--ERDEYFTKLKQLIEEAYKKN---GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccC-CEEEEE---eechhhchh--hHHHHHHHHHHHHHHHHHhc---CCcEEEEEeCCCchHHHHH
Confidence 47888899999887531 111211 112332221 11123455555555554432 5899999999999999998
Q ss_pred HHcCCC------ceeEEEEeCCc
Q 004866 591 INCCPD------LFRAVVLEVPF 607 (726)
Q Consensus 591 ~~~~p~------~f~a~v~~~p~ 607 (726)
+...+. .+++.|+.++.
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p 159 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTP 159 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCC
Confidence 887643 36777776653
No 359
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=91.29 E-value=0.57 Score=39.83 Aligned_cols=43 Identities=14% Similarity=-0.026 Sum_probs=34.9
Q ss_pred CCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEEEcCCCCCCC
Q 004866 655 LYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILLNLTTDIVEE 704 (726)
Q Consensus 655 ~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~gH~~~ 704 (726)
..|+|++.+..|+.+|+..+.++.++|... +.+. ..+.||+..
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s------~lvt-~~g~gHg~~ 76 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGS------RLVT-VDGAGHGVY 76 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCc------eEEE-EeccCccee
Confidence 578999999999999999999999998763 2232 688899854
No 360
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=91.17 E-value=1.7 Score=48.98 Aligned_cols=113 Identities=13% Similarity=0.070 Sum_probs=70.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc----------cccccceeEEecCC-CEEEEEEecCCCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----------QAVRVSNIAWAKDG-QALIYVVTDQNKR 191 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~----------~~~~~~~~~WspDg-~~l~y~~~~~~~~ 191 (726)
-+.++.++|||+...... ..| ..++++..+-+..... ...++.++.+.|-. ..++++..|.
T Consensus 453 lITAvcy~PdGk~avIGt-~~G----~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDS--- 524 (712)
T KOG0283|consen 453 LITAVCYSPDGKGAVIGT-FNG----YCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDS--- 524 (712)
T ss_pred hheeEEeccCCceEEEEE-ecc----EEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCC---
Confidence 467788999999987775 556 3777777665543211 11257888888643 3588886553
Q ss_pred CceEEEEEcCCCCceeEEeee-cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 192 PYQIYCSIIGSTDEDALLLEE-SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 192 ~~~l~~~~l~t~~~~~lv~~~-~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+|.++|+.+.. -+..|.. .+..--...+++.||++|+..+ .++.||+++.+.
T Consensus 525 --rIRI~d~~~~~-lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~s---eDs~VYiW~~~~ 577 (712)
T KOG0283|consen 525 --RIRIYDGRDKD-LVHKFKGFRNTSSQISASFSSDGKHIVSAS---EDSWVYIWKNDS 577 (712)
T ss_pred --ceEEEeccchh-hhhhhcccccCCcceeeeEccCCCEEEEee---cCceEEEEeCCC
Confidence 68888874332 1111211 1111124567899999998777 346788888765
No 361
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=91.13 E-value=24 Score=37.62 Aligned_cols=60 Identities=20% Similarity=0.091 Sum_probs=39.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEec
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTD 187 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~ 187 (726)
.+-.+++||||++||.+- . ...|.|||..|.+.+.... .+.+.+++|-..-..+|-...|
T Consensus 204 eil~~avS~Dgkylatgg----~-d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~D 265 (479)
T KOG0299|consen 204 EILTLAVSSDGKYLATGG----R-DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASAD 265 (479)
T ss_pred eeEEEEEcCCCcEEEecC----C-CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecC
Confidence 455678999999998862 1 2357899999999887632 4456666665444445544444
No 362
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.12 E-value=6.1 Score=39.45 Aligned_cols=108 Identities=11% Similarity=0.060 Sum_probs=64.9
Q ss_pred ccccceeEEecCC-CEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCc--eEE
Q 004866 166 AVRVSNIAWAKDG-QALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTS--SKV 242 (726)
Q Consensus 166 ~~~~~~~~WspDg-~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~--~~l 242 (726)
..+..+++++|-. +.++|.+... ...+..|..+.++.+++....+-.||-.-.+|+||++|+-+.+.-.. ..|
T Consensus 67 paR~Hgi~~~p~~~ravafARrPG----tf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGVi 142 (366)
T COG3490 67 PARGHGIAFHPALPRAVAFARRPG----TFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVI 142 (366)
T ss_pred ccccCCeecCCCCcceEEEEecCC----ceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceE
Confidence 3455678888865 4566765332 24566777776655555555555677667799999999988776543 456
Q ss_pred EEEeCCCCCCCeEEeecc----CCceEEeeeecCCEEEEEecC
Q 004866 243 FLINAADPFSGLTLIWEC----EGLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 243 ~~~d~~~~~~~~~~l~~~----~~~~~~~~~~~g~~l~~~t~~ 281 (726)
=++|...+ ...+-+- -+..+..+.+||..+.+ .|.
T Consensus 143 GvYd~r~~---fqrvgE~~t~GiGpHev~lm~DGrtlvv-anG 181 (366)
T COG3490 143 GVYDAREG---FQRVGEFSTHGIGPHEVTLMADGRTLVV-ANG 181 (366)
T ss_pred EEEecccc---cceecccccCCcCcceeEEecCCcEEEE-eCC
Confidence 66676542 2222221 12345566677776655 453
No 363
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=91.03 E-value=13 Score=37.74 Aligned_cols=112 Identities=13% Similarity=0.029 Sum_probs=55.8
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCC-----C--ceecc--------ccccccceeEEe-------cCCCEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-----G--ALCSK--------PQAVRVSNIAWA-------KDGQAL 181 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t-----g--~~~~~--------~~~~~~~~~~Ws-------pDg~~l 181 (726)
+.+.+|||||.-|...+...+ |.++++-. + ..+.. ...+.+....|= |+...+
T Consensus 52 ~kgckWSPDGSciL~~sedn~-----l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~ 126 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNC-----LNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLF 126 (406)
T ss_pred hccceeCCCCceEEeecccCe-----eeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCcccee
Confidence 345689999999877654332 56665421 1 11110 011233445563 343333
Q ss_pred EEEEecCCCCCceEEEEEcCCCCceeEEeee---cCC-ceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 182 IYVVTDQNKRPYQIYCSIIGSTDEDALLLEE---SNE-NVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 182 ~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~---~d~-~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
+.++ +..-|.++|.-+++. +.-|.. .|. .-..++.+||||.+|+..-+ +-|.+.|+..+
T Consensus 127 a~ss-----r~~PIh~wdaftG~l-raSy~~ydh~de~taAhsL~Fs~DGeqlfaGyk----rcirvFdt~Rp 189 (406)
T KOG2919|consen 127 AVSS-----RDQPIHLWDAFTGKL-RASYRAYDHQDEYTAAHSLQFSPDGEQLFAGYK----RCIRVFDTSRP 189 (406)
T ss_pred eecc-----ccCceeeeecccccc-ccchhhhhhHHhhhhheeEEecCCCCeEeeccc----ceEEEeeccCC
Confidence 3332 222466667666541 112211 111 01136789999999975333 34777777544
No 364
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=90.83 E-value=1.7 Score=46.64 Aligned_cols=55 Identities=16% Similarity=0.278 Sum_probs=35.2
Q ss_pred ccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceE---EEEEEcCCCcEEEE
Q 004866 168 RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVY---VNIRHTKDFHFVCV 232 (726)
Q Consensus 168 ~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~---~~~~~s~Dg~~l~~ 232 (726)
.+..++|||||+.|+.+..|. -|.+.+..+.. |+ . .-..|| +=+.||||||||+.
T Consensus 292 ~in~f~FS~DG~~LA~VSqDG-----fLRvF~fdt~e---Ll-g-~mkSYFGGLLCvcWSPDGKyIvt 349 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQDG-----FLRIFDFDTQE---LL-G-VMKSYFGGLLCVCWSPDGKYIVT 349 (636)
T ss_pred cccceeEcCCCceEEEEecCc-----eEEEeeccHHH---HH-H-HHHhhccceEEEEEcCCccEEEe
Confidence 456789999999999986543 35555554432 11 0 112244 34789999999974
No 365
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=90.83 E-value=1.5 Score=45.45 Aligned_cols=103 Identities=14% Similarity=0.113 Sum_probs=63.9
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECC--------C-----Cceeccc--c---ccccceeEEecCCCEEE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN--------S-----GALCSKP--Q---AVRVSNIAWAKDGQALI 182 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~--------t-----g~~~~~~--~---~~~~~~~~WspDg~~l~ 182 (726)
...+..++|||+|..||-..| |+ .+++|-.. + .+...+. . ...+..++|+||+..+.
T Consensus 65 ~~aVN~vRf~p~gelLASg~D--~g---~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~ 139 (434)
T KOG1009|consen 65 TRAVNVVRFSPDGELLASGGD--GG---EVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLV 139 (434)
T ss_pred cceeEEEEEcCCcCeeeecCC--Cc---eEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceee
Confidence 347888999999999987643 22 34555443 3 1111100 0 13456789999999888
Q ss_pred EEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEc
Q 004866 183 YVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 183 y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
..+.+ +.++.+|+..++..... ..+..+.-+++|.|-++|+.-.+.
T Consensus 140 s~s~d-----ns~~l~Dv~~G~l~~~~--~dh~~yvqgvawDpl~qyv~s~s~ 185 (434)
T KOG1009|consen 140 SGSVD-----NSVRLWDVHAGQLLAIL--DDHEHYVQGVAWDPLNQYVASKSS 185 (434)
T ss_pred eeecc-----ceEEEEEeccceeEeec--cccccccceeecchhhhhhhhhcc
Confidence 87654 36788888877633222 123334456889999998865443
No 366
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=90.52 E-value=5.2 Score=41.32 Aligned_cols=115 Identities=15% Similarity=0.090 Sum_probs=73.0
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
..++++.|++ .-++|+..- ..+|.+||+++|....... ......+..+|..+.|+-...++ .+.+||-
T Consensus 261 ~~Vs~V~w~d--~~v~yS~Sw----DHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr-----~irl~DP 329 (423)
T KOG0313|consen 261 EPVSSVVWSD--ATVIYSVSW----DHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDR-----HIRLWDP 329 (423)
T ss_pred cceeeEEEcC--CCceEeecc----cceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCC-----ceeecCC
Confidence 3678889998 557787643 3579999999997654322 33456788899887666554332 4667776
Q ss_pred CCCCceeEEeeecC-CceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESN-ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d-~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.++....+.+.-.. ..+...+.|+|-..+++++...+....+| |+.+
T Consensus 330 R~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klW--DvRS 377 (423)
T KOG0313|consen 330 RTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLW--DVRS 377 (423)
T ss_pred CCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEE--Eecc
Confidence 65542222222111 22445689999999999887766555544 5554
No 367
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=90.37 E-value=0.54 Score=42.38 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 554 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
.+.+...++.+.++.- +.+|.+.|||+||.++..++..
T Consensus 47 ~~~~~~~l~~~~~~~~--~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYP--DYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHST--TSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccc--CccchhhccchHHHHHHHHHHh
Confidence 4455566666665533 4899999999999998877654
No 368
>PRK02888 nitrous-oxide reductase; Validated
Probab=90.26 E-value=6.2 Score=44.38 Aligned_cols=110 Identities=14% Similarity=0.024 Sum_probs=61.5
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC-
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD- 204 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~- 204 (726)
...+||||+++..+.. +.....++..++..+........... .-++.+||+..++. .+.|-.+|..+..
T Consensus 239 ~v~~spdGk~afvTsy-NsE~G~tl~em~a~e~d~~vvfni~~--iea~vkdGK~~~V~-------gn~V~VID~~t~~~ 308 (635)
T PRK02888 239 NVDTDYDGKYAFSTCY-NSEEGVTLAEMMAAERDWVVVFNIAR--IEEAVKAGKFKTIG-------GSKVPVVDGRKAAN 308 (635)
T ss_pred cceECCCCCEEEEecc-CcccCcceeeeccccCceEEEEchHH--HHHhhhCCCEEEEC-------CCEEEEEECCcccc
Confidence 4579999999876641 11112356677664433222111111 12567899977652 2468888876610
Q ss_pred -ceeEEee--ecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 205 -EDALLLE--ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 205 -~~~lv~~--~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
...++.. .+..+ -++.+||||++++++. ..++.+-++|+++
T Consensus 309 ~~~~v~~yIPVGKsP--HGV~vSPDGkylyVan--klS~tVSVIDv~k 352 (635)
T PRK02888 309 AGSALTRYVPVPKNP--HGVNTSPDGKYFIANG--KLSPTVTVIDVRK 352 (635)
T ss_pred CCcceEEEEECCCCc--cceEECCCCCEEEEeC--CCCCcEEEEEChh
Confidence 0112221 22223 2577899999998654 3345677788765
No 369
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=90.05 E-value=15 Score=36.24 Aligned_cols=188 Identities=12% Similarity=0.046 Sum_probs=89.7
Q ss_pred eCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCcee
Q 004866 129 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDA 207 (726)
Q Consensus 129 ~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~ 207 (726)
..+++++|... +..+ .|+.+|..+|+.+-... ........ ..++..+|+... ...|+.+++.+++..-
T Consensus 32 ~~~~~~~v~~~-~~~~----~l~~~d~~tG~~~W~~~~~~~~~~~~-~~~~~~v~v~~~-----~~~l~~~d~~tG~~~W 100 (238)
T PF13360_consen 32 AVPDGGRVYVA-SGDG----NLYALDAKTGKVLWRFDLPGPISGAP-VVDGGRVYVGTS-----DGSLYALDAKTGKVLW 100 (238)
T ss_dssp EEEETTEEEEE-ETTS----EEEEEETTTSEEEEEEECSSCGGSGE-EEETTEEEEEET-----TSEEEEEETTTSCEEE
T ss_pred EEEeCCEEEEE-cCCC----EEEEEECCCCCEEEEeecccccccee-eecccccccccc-----eeeeEecccCCcceee
Confidence 34567766554 4333 59999999998653222 22222222 344556766541 1278999987775211
Q ss_pred EEeeec--CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeecc-CCce--------EEeeeecCCEEE
Q 004866 208 LLLEES--NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-EGLA--------HCIVEHHEGFLY 276 (726)
Q Consensus 208 lv~~~~--d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-~~~~--------~~~~~~~g~~l~ 276 (726)
...... ............++..+++... ...|+.+|++++...++.-... .... ...+.-.++.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (238)
T PF13360_consen 101 SIYLTSSPPAGVRSSSSPAVDGDRLYVGTS---SGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDGRVY 177 (238)
T ss_dssp EEEE-SSCTCSTB--SEEEEETTEEEEEET---CSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTTEEE
T ss_pred eeccccccccccccccCceEecCEEEEEec---cCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECCEEE
Confidence 111111 1111122222334777766654 3468888887743212111111 1111 111112344666
Q ss_pred EEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEE-EeeeCCEEEEEEEeCCeeEEEEEecCCC
Q 004866 277 LFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVED-VDFCKTHMALILREGRTYRLCSVSLPLP 349 (726)
Q Consensus 277 ~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~-~~~~~~~lv~~~~~~g~~~l~~~~l~~~ 349 (726)
+.+... .++.+++. .. ...|+.. .. .+.. ....++.|++.. .+ ..|+.+|+.++
T Consensus 178 ~~~~~g---------~~~~~d~~-tg-~~~w~~~-~~----~~~~~~~~~~~~l~~~~-~~--~~l~~~d~~tG 232 (238)
T PF13360_consen 178 VSSGDG---------RVVAVDLA-TG-EKLWSKP-IS----GIYSLPSVDGGTLYVTS-SD--GRLYALDLKTG 232 (238)
T ss_dssp EECCTS---------SEEEEETT-TT-EEEEEEC-SS-----ECECEECCCTEEEEEE-TT--TEEEEEETTTT
T ss_pred EEcCCC---------eEEEEECC-CC-CEEEEec-CC----CccCCceeeCCEEEEEe-CC--CEEEEEECCCC
Confidence 554332 15556765 32 2236322 11 1223 445567777666 43 46778887764
No 370
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=89.96 E-value=1.2 Score=46.97 Aligned_cols=98 Identities=19% Similarity=0.144 Sum_probs=58.7
Q ss_pred EEEEEcCCCCCCCCccchHHHHHHHHCCcE---EEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 496 GLLHGHGAYGELLDKRWRSELKSLLDRGWV---VAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 496 ~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~---v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
.++++||. +.. ...|......+...||. +..+++.+...-+.. ....+-+.+-++....+ ...
T Consensus 61 pivlVhG~-~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----------~~~~~ql~~~V~~~l~~--~ga 126 (336)
T COG1075 61 PIVLVHGL-GGG-YGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSL----------AVRGEQLFAYVDEVLAK--TGA 126 (336)
T ss_pred eEEEEccC-cCC-cchhhhhhhhhcchHHHhcccccccccccCCCccc----------cccHHHHHHHHHHHHhh--cCC
Confidence 46778886 221 23355555556666777 777777755211100 01222223333333322 233
Q ss_pred CcEEEEEecccHHHHHHHHHcCC--CceeEEEEeCCc
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCP--DLFRAVVLEVPF 607 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p--~~f~a~v~~~p~ 607 (726)
.++.+.|||+||.++..++...+ .+++.++...+.
T Consensus 127 ~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp 163 (336)
T COG1075 127 KKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTP 163 (336)
T ss_pred CceEEEeecccchhhHHHHhhcCccceEEEEEEeccC
Confidence 89999999999999999888887 778888876653
No 371
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=89.68 E-value=5.8 Score=41.41 Aligned_cols=93 Identities=11% Similarity=0.155 Sum_probs=60.1
Q ss_pred EEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecC---CceEEEEEEc
Q 004866 149 TLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESN---ENVYVNIRHT 224 (726)
Q Consensus 149 ~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d---~~~~~~~~~s 224 (726)
.|++||..++..+.... .+.+.++.-++||..|.-...| ..+-.+|+.+.+. +.+|.... ...+..+.+|
T Consensus 323 kvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~lLsssRD-----dtl~viDlRt~eI-~~~~sA~g~k~asDwtrvvfS 396 (459)
T KOG0288|consen 323 KVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLELLSSSRD-----DTLKVIDLRTKEI-RQTFSAEGFKCASDWTRVVFS 396 (459)
T ss_pred ceEEEeccCCceeeEeecCcceeeEeeccCCeEEeeecCC-----CceeeeecccccE-EEEeeccccccccccceeEEC
Confidence 48888887776665433 5578889999999888766333 2466677766532 23333211 1112356789
Q ss_pred CCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 225 KDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 225 ~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
||+.|++-.+. ...||++++.++
T Consensus 397 pd~~YvaAGS~---dgsv~iW~v~tg 419 (459)
T KOG0288|consen 397 PDGSYVAAGSA---DGSVYIWSVFTG 419 (459)
T ss_pred CCCceeeeccC---CCcEEEEEccCc
Confidence 99999975444 346899998874
No 372
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=89.64 E-value=19 Score=36.38 Aligned_cols=108 Identities=12% Similarity=0.138 Sum_probs=62.8
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCC------------Ccee---cc--cc---ccccceeEEecCCCEEEEEEe
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS------------GALC---SK--PQ---AVRVSNIAWAKDGQALIYVVT 186 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t------------g~~~---~~--~~---~~~~~~~~WspDg~~l~y~~~ 186 (726)
.++||||..+|-.+ -...|.++|++- |+.. ++ +. .+.+..+.|.|-.. |+.+..
T Consensus 118 aafs~DG~lvATGs-----aD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~-ILiS~s 191 (430)
T KOG0640|consen 118 AAFSPDGSLVATGS-----ADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRET-ILISGS 191 (430)
T ss_pred eeeCCCCcEEEccC-----CcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhh-eEEecc
Confidence 46999999987653 234589999861 1110 11 11 23456678888765 444432
Q ss_pred cCCCCCceEEEEEcCCCC--ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 187 DQNKRPYQIYCSIIGSTD--EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 187 ~~~~~~~~l~~~~l~t~~--~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+..-|.+.|+.... ..-.++.+..+ ...+++.|.|.+|++.... .-+.++|+.+
T Consensus 192 ----rD~tvKlFDfsK~saKrA~K~~qd~~~--vrsiSfHPsGefllvgTdH---p~~rlYdv~T 247 (430)
T KOG0640|consen 192 ----RDNTVKLFDFSKTSAKRAFKVFQDTEP--VRSISFHPSGEFLLVGTDH---PTLRLYDVNT 247 (430)
T ss_pred ----CCCeEEEEecccHHHHHHHHHhhccce--eeeEeecCCCceEEEecCC---CceeEEeccc
Confidence 33457777775442 11223433322 2357889999999876653 3466777765
No 373
>PRK13614 lipoprotein LpqB; Provisional
Probab=89.62 E-value=32 Score=38.97 Aligned_cols=161 Identities=9% Similarity=-0.061 Sum_probs=85.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEc-C
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII-G 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l-~ 201 (726)
.+..+.+|+||+.+|+.. ++ ...|++.... +....+........+.|.++| +++-. .+ ..+..|.+..- +
T Consensus 344 ~~~s~avS~~g~~~A~~~---~~-~~~l~~~~~g-~~~~~~~~g~~Lt~PS~d~~g-~vWtv-~~--g~~~~vv~~~~~g 414 (573)
T PRK13614 344 GPASPAESPVSQTVAFLN---GS-RTTLYTVSPG-QPARALTSGSTLTRPSFSPQD-WVWTA-GP--GGNGRIVAYRPTG 414 (573)
T ss_pred cccceeecCCCceEEEec---CC-CcEEEEecCC-CcceeeecCCCccCCcccCCC-CEEEe-eC--CCCceEEEEecCC
Confidence 355678999999999973 22 2467776653 333322223346778899888 56533 22 22235555442 2
Q ss_pred CCC---ce--eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC-CCCCeEEeeccC------CceEEeee
Q 004866 202 STD---ED--ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD-PFSGLTLIWECE------GLAHCIVE 269 (726)
Q Consensus 202 t~~---~~--~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~-~~~~~~~l~~~~------~~~~~~~~ 269 (726)
++. .. .+.....+..-...+..|+||-.+++.....+...|++.-+.. ..+.++.|.... ......|
T Consensus 415 ~~~~~~~~~~~v~~~~l~g~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W- 493 (573)
T PRK13614 415 VAEGAQAPTVTLTADWLAGRTVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGAW- 493 (573)
T ss_pred CcccccccceeecccccCCCeeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCCeEEccCceecccCCCcceeEE-
Confidence 211 11 1111111222245688999999998877655555666643321 123444443321 1112223
Q ss_pred ecCCEEEEEecCcccCCCCCCeEEEEeeC
Q 004866 270 HHEGFLYLFTDAAKEGQEADNHYLLRCPV 298 (726)
Q Consensus 270 ~~g~~l~~~t~~~~~~~~~~~~~l~~~~~ 298 (726)
-+++.|++++...++ +..++.+.+
T Consensus 494 ~~~~sl~V~~~~~~~-----~~~~~~v~v 517 (573)
T PRK13614 494 VGDSTVVVTKASATS-----NVVPELLSV 517 (573)
T ss_pred cCCCEEEEEeccCCC-----cceEEEEEe
Confidence 456778888764432 344555555
No 374
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=89.62 E-value=5.1 Score=45.18 Aligned_cols=129 Identities=10% Similarity=0.060 Sum_probs=78.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec--ccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS--KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~--~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
++.+++|||--...-++...+| .|.+||+.--.... ++. .+-+.-+.|+|++.+|+-. +|..+|.+++
T Consensus 178 SiRDV~fsp~~~~~F~s~~dsG----~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATG-----GRDK~vkiWd 248 (839)
T KOG0269|consen 178 SIRDVKFSPGYGNKFASIHDSG----YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATG-----GRDKMVKIWD 248 (839)
T ss_pred hhhceeeccCCCceEEEecCCc----eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeec-----CCCccEEEEe
Confidence 4566788885444434444445 48899987543322 222 3345667899988777654 2445677778
Q ss_pred cCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC
Q 004866 200 IGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 262 (726)
Q Consensus 200 l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 262 (726)
.+++. ....+.+... + ..-+.|-|+..+.+-++.......|+++|+..+--+...+....+
T Consensus 249 ~t~~~~~~~~tInTia-p-v~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~ 310 (839)
T KOG0269|consen 249 MTDSRAKPKHTINTIA-P-VGRVKWRPARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTD 310 (839)
T ss_pred ccCCCccceeEEeecc-e-eeeeeeccCccchhhhhhccccceEEEEeeccccccceeeeccCc
Confidence 77655 3333332211 1 234789999998887777777788999999765433333433333
No 375
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=89.54 E-value=30 Score=36.26 Aligned_cols=113 Identities=12% Similarity=0.178 Sum_probs=73.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce-ecccc--------ccccceeEEecCCCEEEEEEecCCCCCc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-CSKPQ--------AVRVSNIAWAKDGQALIYVVTDQNKRPY 193 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~-~~~~~--------~~~~~~~~WspDg~~l~y~~~~~~~~~~ 193 (726)
.+-+..|+|=...+.- .|+|...|.||.+-.+-. ..++. ..+++-+.|.|--.-++.+. ...+
T Consensus 83 ~vLDi~w~PfnD~vIA----SgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsa----g~Dn 154 (472)
T KOG0303|consen 83 PVLDIDWCPFNDCVIA----SGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSA----GSDN 154 (472)
T ss_pred cccccccCccCCceee----cCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhc----cCCc
Confidence 3445679997776533 366778899998754422 22221 12567889999877777664 3345
Q ss_pred eEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 194 QIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 194 ~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.|.+++++++.. .+... .+....++.|+-||..|+-++.+ ..|.++|..+
T Consensus 155 ~v~iWnv~tgea-li~l~--hpd~i~S~sfn~dGs~l~TtckD---KkvRv~dpr~ 204 (472)
T KOG0303|consen 155 TVSIWNVGTGEA-LITLD--HPDMVYSMSFNRDGSLLCTTCKD---KKVRVIDPRR 204 (472)
T ss_pred eEEEEeccCCce-eeecC--CCCeEEEEEeccCCceeeeeccc---ceeEEEcCCC
Confidence 899999999853 22222 22234578899999998765543 3678888766
No 376
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=89.41 E-value=4.4 Score=33.25 Aligned_cols=73 Identities=10% Similarity=0.089 Sum_probs=42.1
Q ss_pred eeEEecCCCEEEEEEecCC-------------CCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCC
Q 004866 171 NIAWAKDGQALIYVVTDQN-------------KRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 171 ~~~WspDg~~l~y~~~~~~-------------~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
+++.++|+..|||+..... ....+|+++|..+++..+++ +. -.|--+++.|+|+++|++....
T Consensus 2 dldv~~~~g~vYfTdsS~~~~~~~~~~~~le~~~~GRll~ydp~t~~~~vl~-~~--L~fpNGVals~d~~~vlv~Et~- 77 (89)
T PF03088_consen 2 DLDVDQDTGTVYFTDSSSRYDRRDWVYDLLEGRPTGRLLRYDPSTKETTVLL-DG--LYFPNGVALSPDESFVLVAETG- 77 (89)
T ss_dssp EEEE-TTT--EEEEES-SS--TTGHHHHHHHT---EEEEEEETTTTEEEEEE-EE--ESSEEEEEE-TTSSEEEEEEGG-
T ss_pred ceeEecCCCEEEEEeCccccCccceeeeeecCCCCcCEEEEECCCCeEEEeh-hC--CCccCeEEEcCCCCEEEEEecc-
Confidence 3556677567888754322 12357999999987654444 22 2344578999999999887653
Q ss_pred CceEEEEEeCC
Q 004866 238 TSSKVFLINAA 248 (726)
Q Consensus 238 ~~~~l~~~d~~ 248 (726)
..+|..+-++
T Consensus 78 -~~Ri~rywl~ 87 (89)
T PF03088_consen 78 -RYRILRYWLK 87 (89)
T ss_dssp -GTEEEEEESS
T ss_pred -CceEEEEEEe
Confidence 2345554443
No 377
>PRK13613 lipoprotein LpqB; Provisional
Probab=89.36 E-value=18 Score=41.21 Aligned_cols=165 Identities=14% Similarity=0.040 Sum_probs=85.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce-----eccccccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-----CSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~-----~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
.+..+++|+||+.+|+.. ..+ ..|++-.+..+.. ...........+.|.++| +++-. +......++.+
T Consensus 364 ~~~s~avS~~g~~~A~v~-~~~---~~l~vg~~~~~~~~~~~~~~~~~~~~Lt~PS~d~~g-~vWtv--d~~~~~~~vl~ 436 (599)
T PRK13613 364 PLRRVAVSRDESRAAGIS-ADG---DSVYVGSLTPGASIGVHSWGVTADGRLTSPSWDGRG-DLWVV--DRDPADPRLLW 436 (599)
T ss_pred CccceEEcCCCceEEEEc-CCC---cEEEEeccCCCCccccccceeeccCcccCCcCcCCC-CEEEe--cCCCCCceEEE
Confidence 355678999999999984 222 4688877655543 112223356778898887 56543 22112223333
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC-CCC-----eEEeeccCCceEEeeeec
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP-FSG-----LTLIWECEGLAHCIVEHH 271 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~-~~~-----~~~l~~~~~~~~~~~~~~ 271 (726)
..-+++....+-....+..-...+..|+||-.+++.........|++.-+... .+. +..+...-.......+-+
T Consensus 437 v~~~~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~ 516 (599)
T PRK13613 437 LLQGDGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRSLAPELEDVTDMSWAG 516 (599)
T ss_pred EEcCCCcEEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEEeccCCCccceeEEcC
Confidence 22233331111111112223456889999999988877655556665433221 122 222222222222222245
Q ss_pred CCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 272 EGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 272 g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
++.|+++....++ +..++.+.++
T Consensus 517 ~~sL~Vlg~~~~~-----~~~v~~v~vd 539 (599)
T PRK13613 517 DSQLVVLGREEGG-----VQQARYVQVD 539 (599)
T ss_pred CCEEEEEeccCCC-----CcceEEEecC
Confidence 6677776532221 3557777776
No 378
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=89.16 E-value=5.6 Score=39.81 Aligned_cols=113 Identities=9% Similarity=-0.012 Sum_probs=65.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec--ccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS--KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~--~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+...+|+|||..+|-+ |. ..+|++|++.+-..-. +.. .+.+..+.|.+|++.|+-...|. .|+.+|
T Consensus 49 eI~~~~F~P~gs~~aSg----G~-Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk-----~v~~wD 118 (338)
T KOG0265|consen 49 EIYTIKFHPDGSCFASG----GS-DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDK-----TVRGWD 118 (338)
T ss_pred eEEEEEECCCCCeEeec----CC-cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCc-----eEEEEe
Confidence 56667899999987643 33 3479999976543211 111 45678899999999887664432 688889
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+.+++..+- + ..+..+.-.+..+.=|-.++.+.... ..+.++|...
T Consensus 119 ~~tG~~~rk-~-k~h~~~vNs~~p~rrg~~lv~SgsdD--~t~kl~D~R~ 164 (338)
T KOG0265|consen 119 AETGKRIRK-H-KGHTSFVNSLDPSRRGPQLVCSGSDD--GTLKLWDIRK 164 (338)
T ss_pred cccceeeeh-h-ccccceeeecCccccCCeEEEecCCC--ceEEEEeecc
Confidence 888752211 1 11222322233344455555444433 3455556553
No 379
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=89.01 E-value=6.3 Score=41.96 Aligned_cols=115 Identities=8% Similarity=-0.036 Sum_probs=73.3
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCC-Cceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-GALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t-g~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
-.++.++|.|-.-+|..+...++ .|+||++-+ ++.++... ...+..+.|+++|+.|+-..+|. -|.++
T Consensus 215 kgvsai~~fp~~~hLlLS~gmD~----~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~-----~lKlw 285 (503)
T KOG0282|consen 215 KGVSAIQWFPKKGHLLLSGGMDG----LVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDR-----FLKLW 285 (503)
T ss_pred cccchhhhccceeeEEEecCCCc----eEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecce-----eeeee
Confidence 36788899995555555543333 589999877 55444322 33567899999999998877664 46667
Q ss_pred EcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 199 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 199 ~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
|+.|++. ..-|+.....+. +.+.||+..+++.-.. ..+|..+|+.++
T Consensus 286 DtETG~~-~~~f~~~~~~~c--vkf~pd~~n~fl~G~s--d~ki~~wDiRs~ 332 (503)
T KOG0282|consen 286 DTETGQV-LSRFHLDKVPTC--VKFHPDNQNIFLVGGS--DKKIRQWDIRSG 332 (503)
T ss_pred ccccceE-EEEEecCCCcee--eecCCCCCcEEEEecC--CCcEEEEeccch
Confidence 8887752 122333322332 4678999666654432 356888888774
No 380
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=88.90 E-value=0.71 Score=47.75 Aligned_cols=104 Identities=16% Similarity=0.162 Sum_probs=63.7
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCC------ceE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRP------YQI 195 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~------~~l 195 (726)
+-.+.||||+..++..+- . ..++++|+..|....... ......++|.|-+++|.-...++..+. ..+
T Consensus 126 iydL~Ws~d~~~l~s~s~-d----ns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~ 200 (434)
T KOG1009|consen 126 IYDLAWSPDSNFLVSGSV-D----NSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVI 200 (434)
T ss_pred hhhhhccCCCceeeeeec-c----ceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeee
Confidence 445689999999988642 1 348999999998765433 235578999999988876655542211 112
Q ss_pred EEEE-------cCCCC--ceeEEe-eecCCceEEEEEEcCCCcEEEE
Q 004866 196 YCSI-------IGSTD--EDALLL-EESNENVYVNIRHTKDFHFVCV 232 (726)
Q Consensus 196 ~~~~-------l~t~~--~~~lv~-~~~d~~~~~~~~~s~Dg~~l~~ 232 (726)
+++. .+... ...-+| .+.-..||-.++|||||..|+.
T Consensus 201 ~~~~~~~m~~~~~~~~e~~s~rLfhDeTlksFFrRlsfTPdG~llvt 247 (434)
T KOG1009|consen 201 KRHGLDIMPAKAFNEREGKSTRLFHDETLKSFFRRLSFTPDGSLLVT 247 (434)
T ss_pred eeeeeeEeeecccCCCCcceeeeeecCchhhhhhhcccCCCCcEEEc
Confidence 2222 11111 111133 3333457777899999998764
No 381
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=88.82 E-value=28 Score=35.10 Aligned_cols=74 Identities=20% Similarity=0.175 Sum_probs=47.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCC-Cceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNS-GALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~t-g~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
+++.++|||.-..++...+-+| ++++|++.. |....... .+.+-...|+.||..+|-...| .++-++
T Consensus 29 sIS~l~FSP~~~~~~~A~SWD~----tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~D-----k~~k~w 99 (347)
T KOG0647|consen 29 SISALAFSPQADNLLAAGSWDG----TVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCD-----KQAKLW 99 (347)
T ss_pred chheeEeccccCceEEecccCC----ceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccC-----CceEEE
Confidence 6788899994444433333334 588998876 44443221 3345678999999776655433 367778
Q ss_pred EcCCCCc
Q 004866 199 IIGSTDE 205 (726)
Q Consensus 199 ~l~t~~~ 205 (726)
||.+++.
T Consensus 100 DL~S~Q~ 106 (347)
T KOG0647|consen 100 DLASGQV 106 (347)
T ss_pred EccCCCe
Confidence 9988863
No 382
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=88.58 E-value=0.59 Score=43.01 Aligned_cols=26 Identities=27% Similarity=0.111 Sum_probs=21.7
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCC
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPD 596 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~ 596 (726)
...+|.++|||+||.++..++.....
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~ 51 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRG 51 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHh
Confidence 45799999999999999888776543
No 383
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=88.45 E-value=6.3 Score=39.11 Aligned_cols=90 Identities=18% Similarity=0.112 Sum_probs=52.8
Q ss_pred ccEEEEEcCCCCCCCCccchHHHHHHHHC-CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 494 NPGLLHGHGAYGELLDKRWRSELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 494 ~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
.|+| ..||-...+...++....+.+-+. |..|...+.--+ -...|. .+-.+-+.-+++.+. +.-.-+
T Consensus 24 ~P~i-i~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig~g--~~~s~l--------~pl~~Qv~~~ce~v~-~m~~ls 91 (296)
T KOG2541|consen 24 VPVI-VWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIGDG--IKDSSL--------MPLWEQVDVACEKVK-QMPELS 91 (296)
T ss_pred CCEE-EEeccCcccccchHHHHHHHHHhCCCCeeEEEEecCC--cchhhh--------ccHHHHHHHHHHHHh-cchhcc
Confidence 4554 458744444444566667777774 888888886432 111111 122333333444444 433345
Q ss_pred CcEEEEEecccHHHHHHHHHcCC
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCP 595 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p 595 (726)
+-.-|+|.|.||.++=+++..-+
T Consensus 92 qGynivg~SQGglv~Raliq~cd 114 (296)
T KOG2541|consen 92 QGYNIVGYSQGGLVARALIQFCD 114 (296)
T ss_pred CceEEEEEccccHHHHHHHHhCC
Confidence 77899999999988877775543
No 384
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=88.11 E-value=24 Score=39.79 Aligned_cols=195 Identities=11% Similarity=0.010 Sum_probs=101.7
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecC---CC-EEEEEEecCCCCCceE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKD---GQ-ALIYVVTDQNKRPYQI 195 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspD---g~-~l~y~~~~~~~~~~~l 195 (726)
+-.+.++.+++|+.-+.++. ++ -.+.|||+.+-+.+.+.. .....+....++ ++ .++++... ...+
T Consensus 192 ~S~vtsL~~~~d~~~~ls~~-RD----kvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~----~g~~ 262 (775)
T KOG0319|consen 192 KSAVTSLAFSEDSLELLSVG-RD----KVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGG----SGVV 262 (775)
T ss_pred hhheeeeeeccCCceEEEec-cC----cEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecC----CceE
Confidence 34677889999999887763 22 258999996655443322 233444555554 33 24455432 2245
Q ss_pred EEEEcCCCCceeEEeeec-CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCce--EEeeeecC
Q 004866 196 YCSIIGSTDEDALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLA--HCIVEHHE 272 (726)
Q Consensus 196 ~~~~l~t~~~~~lv~~~~-d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~--~~~~~~~g 272 (726)
...+..+++.. .....+ ++.+--......+++.+++++. .++.++|.++.. ..+.+....+.+ -.++.++.
T Consensus 263 ~~~d~es~~~~-~~~~~~~~~e~~~~~~~~~~~~~l~vtae----Qnl~l~d~~~l~-i~k~ivG~ndEI~Dm~~lG~e~ 336 (775)
T KOG0319|consen 263 QYWDSESGKCV-YKQRQSDSEEIDHLLAIESMSQLLLVTAE----QNLFLYDEDELT-IVKQIVGYNDEILDMKFLGPEE 336 (775)
T ss_pred EEEecccchhh-hhhccCCchhhhcceeccccCceEEEEcc----ceEEEEEccccE-EehhhcCCchhheeeeecCCcc
Confidence 55555444200 000001 1111111233455666665543 358888776521 011122111111 12455777
Q ss_pred CEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeee-CCEEEEEEEeCCeeEEEEEe
Q 004866 273 GFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC-KTHMALILREGRTYRLCSVS 345 (726)
Q Consensus 273 ~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~~ 345 (726)
++|++.||.+. .+++.++-. . -.++++..+. +-+++.. .+.++++...+-.-.+++++
T Consensus 337 ~~laVATNs~~-------lr~y~~~~~------~-c~ii~GH~e~-vlSL~~~~~g~llat~sKD~svilWr~~ 395 (775)
T KOG0319|consen 337 SHLAVATNSPE-------LRLYTLPTS------Y-CQIIPGHTEA-VLSLDVWSSGDLLATGSKDKSVILWRLN 395 (775)
T ss_pred ceEEEEeCCCc-------eEEEecCCC------c-eEEEeCchhh-eeeeeecccCcEEEEecCCceEEEEEec
Confidence 89999999763 677733221 1 1266555444 4445533 44588888888888888884
No 385
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=87.87 E-value=43 Score=36.04 Aligned_cols=248 Identities=14% Similarity=0.028 Sum_probs=128.4
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccc--cccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~--~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
....|+|..+.+... ..+ ++.+.+............ .......-+++++.+|....+ ...|..++..+..
T Consensus 36 v~~~~~g~~~~v~~~-~~~---~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~----~~~v~vid~~~~~ 107 (381)
T COG3391 36 VAVNPDGTQVYVANS-GSN---DVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGD----SNTVSVIDTATNT 107 (381)
T ss_pred eEEcCccCEEEEEee-cCc---eeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCC----CCeEEEEcCcccc
Confidence 468999988766543 222 567777653332221111 123467788888888776433 2367777755433
Q ss_pred ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCccc
Q 004866 205 EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAAKE 284 (726)
Q Consensus 205 ~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~ 284 (726)
.+....-...-.++.+++|++++++.......+.++.+|..+... ...+.-........++++|..+|... ...
T Consensus 108 ---~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~-~~~~~vG~~P~~~a~~p~g~~vyv~~-~~~- 181 (381)
T COG3391 108 ---VLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKV-TATIPVGNTPTGVAVDPDGNKVYVTN-SDD- 181 (381)
T ss_pred ---eeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeE-EEEEecCCCcceEEECCCCCeEEEEe-cCC-
Confidence 111111111223578999999998876654567889999877321 12222222233456778888877765 221
Q ss_pred CCCCCCeEEEEeeCCCCCCCCCc--eE--EeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCCCCCCcceeeccc
Q 004866 285 GQEADNHYLLRCPVDASFPSRTW--ES--VFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPLPAGKGVVHLKEL 360 (726)
Q Consensus 285 ~~~~~~~~l~~~~~~~~~~~~~~--~~--v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~~~~~~~~~~~~~ 360 (726)
..|..++.. . ..-+ .. .+..........+...+.++++....+....+.+++..++. +.
T Consensus 182 ------~~v~vi~~~-~--~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~------v~-- 244 (381)
T COG3391 182 ------NTVSVIDTS-G--NSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGN------VT-- 244 (381)
T ss_pred ------CeEEEEeCC-C--cceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCce------EE--
Confidence 236666654 1 1111 10 11111111223455566777777665544566677765432 10
Q ss_pred ccccccCCCceeeeecCCCCcCCCcEEEEEEccCCCCceEEEEECCCCeEEE
Q 004866 361 HPHFLPLPKYVSQIVPGPNYDYYSSTMRFAISSPVMPDAVVDYDLSYGKWNI 412 (726)
Q Consensus 361 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~~~~~~~ 412 (726)
....|.... ...+...++++..+.+..+. ...++.+|..+..+..
T Consensus 245 ---~~~~~~~~~-~~~~v~~~p~g~~~yv~~~~---~~~V~vid~~~~~v~~ 289 (381)
T COG3391 245 ---ATDLPVGSG-APRGVAVDPAGKAAYVANSQ---GGTVSVIDGATDRVVK 289 (381)
T ss_pred ---EeccccccC-CCCceeECCCCCEEEEEecC---CCeEEEEeCCCCceee
Confidence 111111110 01122335666655443333 7788999987766543
No 386
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=87.77 E-value=26 Score=36.19 Aligned_cols=110 Identities=15% Similarity=0.133 Sum_probs=64.3
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEe-cCC------------C
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVT-DQN------------K 190 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~-~~~------------~ 190 (726)
-++++-||..+|-... ..+|.+|-+++++...+.. .-.+.-++|.|+.. |... +.. .
T Consensus 240 ~v~v~~DGti~As~s~-----dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~---~~~i~~at~~~~~~~~l~s~S 311 (406)
T KOG0295|consen 240 MVRVNQDGTIIASCSN-----DQTLRVWVVATKQCKAELREHEHPVECIAWAPESS---YPSISEATGSTNGGQVLGSGS 311 (406)
T ss_pred EEEecCCeeEEEecCC-----CceEEEEEeccchhhhhhhccccceEEEEeccccc---CcchhhccCCCCCccEEEeec
Confidence 3568889987765421 2468999999985443322 22344567877643 2211 100 1
Q ss_pred CCceEEEEEcCCCCceeEEeeec-CCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 191 RPYQIYCSIIGSTDEDALLLEES-NENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 191 ~~~~l~~~~l~t~~~~~lv~~~~-d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+..-|..+++.++. ++++-. .+.+..++.++|.||||+-.+.++ .|.++|+.+
T Consensus 312 rDktIk~wdv~tg~---cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk---tlrvwdl~~ 365 (406)
T KOG0295|consen 312 RDKTIKIWDVSTGM---CLFTLVGHDNWVRGVAFSPGGKYILSCADDK---TLRVWDLKN 365 (406)
T ss_pred ccceEEEEeccCCe---EEEEEecccceeeeeEEcCCCeEEEEEecCC---cEEEEEecc
Confidence 22346677887763 333322 233456789999999997555543 366677765
No 387
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=87.71 E-value=7.7 Score=37.61 Aligned_cols=83 Identities=18% Similarity=0.219 Sum_probs=47.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCc----EEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceE--E
Q 004866 124 EELSEVSPDHKFLAYTMYDKDND----YFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQI--Y 196 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e----~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l--~ 196 (726)
+.+-.++||||+.+=++...|.+ .-.||.+-+ +++....-. .....+++|+-|.+.+||+.. ..+.| |
T Consensus 111 ~NDgkvdP~Gryy~GtMad~~~~le~~~g~Ly~~~~-~h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDs----ln~~V~a~ 185 (310)
T KOG4499|consen 111 LNDGKVDPDGRYYGGTMADFGDDLEPIGGELYSWLA-GHQVELIWNCVGISNGLAWDSDAKKFYYIDS----LNYEVDAY 185 (310)
T ss_pred cccCccCCCCceeeeeeccccccccccccEEEEecc-CCCceeeehhccCCccccccccCcEEEEEcc----CceEEeee
Confidence 34456899999965554433321 123555443 333222211 223457899999999999842 23456 6
Q ss_pred EEEcCCCC--ceeEEee
Q 004866 197 CSIIGSTD--EDALLLE 211 (726)
Q Consensus 197 ~~~l~t~~--~~~lv~~ 211 (726)
-+|..+++ ....+|.
T Consensus 186 dyd~~tG~~snr~~i~d 202 (310)
T KOG4499|consen 186 DYDCPTGDLSNRKVIFD 202 (310)
T ss_pred ecCCCcccccCcceeEE
Confidence 66677775 4444554
No 388
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=87.61 E-value=1.9 Score=32.82 Aligned_cols=48 Identities=27% Similarity=0.438 Sum_probs=26.8
Q ss_pred CCCceEEEEEEECCCCcEEEEEEEEcCC--CCCCCCccEEEEEcCCCCCC
Q 004866 460 SEFYSCEQYDVPSHDGISVPLTIIYSPK--YKKENQNPGLLHGHGAYGEL 507 (726)
Q Consensus 460 ~~~~~~~~~~~~s~dG~~i~~~l~~p~~--~~~~~~~P~vl~~hGg~~~~ 507 (726)
...|.+|...+.+.||.-|...=+.++. ....++.|.|++.||-.+++
T Consensus 7 ~~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss 56 (63)
T PF04083_consen 7 KHGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSS 56 (63)
T ss_dssp HTT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--G
T ss_pred HcCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccCh
Confidence 3568899999999999988876555543 22446678999999966543
No 389
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=87.39 E-value=5.1 Score=39.98 Aligned_cols=102 Identities=11% Similarity=-0.055 Sum_probs=58.2
Q ss_pred eeeCCCCCE-EEEEEeCCCCcEEEEEEEECCCCceeccc-c-cc--ccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 127 SEVSPDHKF-LAYTMYDKDNDYFTLSVRNLNSGALCSKP-Q-AV--RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 127 ~~~SPDG~~-la~~~~~~g~e~~~l~v~dl~tg~~~~~~-~-~~--~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+.++|--.+ +||. .+.|.. -+++|+.++....+. . .+ -++.-.|||||++||-+.++-.....-|=++|..
T Consensus 73 i~~~p~~~ravafA-RrPGtf---~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r 148 (366)
T COG3490 73 IAFHPALPRAVAFA-RRPGTF---AMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAR 148 (366)
T ss_pred eecCCCCcceEEEE-ecCCce---EEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecc
Confidence 457887666 5555 566753 678999888654332 2 22 3456789999999988877643333334444543
Q ss_pred CCCceeEEeeecC-CceEEEEEEcCCCcEEEEEE
Q 004866 202 STDEDALLLEESN-ENVYVNIRHTKDFHFVCVHT 234 (726)
Q Consensus 202 t~~~~~lv~~~~d-~~~~~~~~~s~Dg~~l~~~~ 234 (726)
..-..+--+.... .+ -.+.|.+||+.|++..
T Consensus 149 ~~fqrvgE~~t~GiGp--Hev~lm~DGrtlvvan 180 (366)
T COG3490 149 EGFQRVGEFSTHGIGP--HEVTLMADGRTLVVAN 180 (366)
T ss_pred cccceecccccCCcCc--ceeEEecCCcEEEEeC
Confidence 2211111111000 01 1467899999987643
No 390
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=87.34 E-value=6.3 Score=39.34 Aligned_cols=132 Identities=14% Similarity=0.140 Sum_probs=73.3
Q ss_pred EEeecccccccCCceE---EeeceeeCCCCC---EEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCC
Q 004866 107 KLLDYNQEAERFGGYA---YEELSEVSPDHK---FLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDG 178 (726)
Q Consensus 107 ~lld~n~~~~~~~~~~---~~~~~~~SPDG~---~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg 178 (726)
.+.|.|++...-. |. .+..-+|||=.. .||.. .+ ..++.+-|+++|....... .+.+-.+.|||-.
T Consensus 127 KVWDtnTlQ~a~~-F~me~~VYshamSp~a~sHcLiA~g--tr---~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~ 200 (397)
T KOG4283|consen 127 KVWDTNTLQEAVD-FKMEGKVYSHAMSPMAMSHCLIAAG--TR---DVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSS 200 (397)
T ss_pred EEeecccceeeEE-eecCceeehhhcChhhhcceEEEEe--cC---CCcEEEEeccCCcceeeeccccCceEEEEeccCc
Confidence 4578887764311 11 233346788443 34443 22 3569999999997654332 4577889999999
Q ss_pred CEEEEEEecCCCCCceEEEEEcC--CCCc---------eeEEee--ecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE
Q 004866 179 QALIYVVTDQNKRPYQIYCSIIG--STDE---------DALLLE--ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI 245 (726)
Q Consensus 179 ~~l~y~~~~~~~~~~~l~~~~l~--t~~~---------~~lv~~--~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 245 (726)
.+++++..-+. .+.++|+. ++.- ...+.+ .....-+-+++|+.||++++.. ++.+.+.+.
T Consensus 201 e~vLatgsaDg----~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~---gtd~r~r~w 273 (397)
T KOG4283|consen 201 EWVLATGSADG----AIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASC---GTDDRIRVW 273 (397)
T ss_pred eeEEEecCCCc----eEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhc---cCccceEEe
Confidence 99999864322 23333332 1110 000111 0011123468999999998632 233456666
Q ss_pred eCCCCC
Q 004866 246 NAADPF 251 (726)
Q Consensus 246 d~~~~~ 251 (726)
+...+.
T Consensus 274 n~~~G~ 279 (397)
T KOG4283|consen 274 NMESGR 279 (397)
T ss_pred ecccCc
Confidence 665543
No 391
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=87.28 E-value=8.8 Score=46.32 Aligned_cols=107 Identities=12% Similarity=0.142 Sum_probs=63.7
Q ss_pred ceeeCCCCCEEEEEEeC-CCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 126 LSEVSPDHKFLAYTMYD-KDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~-~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
.++|-.||+++|.+.-. ..+....|+|++-+ |+...... .+--..++|-|.|..|+-+... .++ ..|..+.-+.
T Consensus 214 ~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~-~~~-~~VvFfErNG 290 (928)
T PF04762_consen 214 RISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRL-PDR-HDVVFFERNG 290 (928)
T ss_pred EEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEc-CCC-cEEEEEecCC
Confidence 35799999999997642 22236789999987 54333222 2344678999999999887642 222 3444443322
Q ss_pred CCceeEEee-ecCCceEEEEEEcCCCcEEEEEEc
Q 004866 203 TDEDALLLE-ESNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 203 ~~~~~lv~~-~~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
-....-... .+...-...+.|++|+..|++...
T Consensus 291 LrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~ 324 (928)
T PF04762_consen 291 LRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLE 324 (928)
T ss_pred cEeeeEecCCCCCCceeeEEEECCCCCEEEEEec
Confidence 111111111 112222357899999999988764
No 392
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=86.98 E-value=62 Score=36.92 Aligned_cols=144 Identities=13% Similarity=0.080 Sum_probs=77.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECC-----CCce---ec------cccccccceeEEecCCCEEEEEEecC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLN-----SGAL---CS------KPQAVRVSNIAWAKDGQALIYVVTDQ 188 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~-----tg~~---~~------~~~~~~~~~~~WspDg~~l~y~~~~~ 188 (726)
.+..++.+|||+..+-++. .-++.+||.. .|.. +. +...+.+-.+..||||+.|+..-.+.
T Consensus 456 aIWsi~~~pD~~g~vT~sa-----DktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdn 530 (888)
T KOG0306|consen 456 AIWSISLSPDNKGFVTGSA-----DKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDN 530 (888)
T ss_pred ceeeeeecCCCCceEEecC-----CcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccC
Confidence 5677789999998766532 1245555532 2211 11 11244667889999999999886653
Q ss_pred CCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-Ee
Q 004866 189 NKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CI 267 (726)
Q Consensus 189 ~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~ 267 (726)
+ -+||..| +-+--.-+|.-.=+ ...+..|||++.|+-.+. +..-.+|=+|..+-. +-+....+.+- ..
T Consensus 531 T---VkVyflD--tlKFflsLYGHkLP--V~smDIS~DSklivTgSA-DKnVKiWGLdFGDCH---KS~fAHdDSvm~V~ 599 (888)
T KOG0306|consen 531 T---VKVYFLD--TLKFFLSLYGHKLP--VLSMDISPDSKLIVTGSA-DKNVKIWGLDFGDCH---KSFFAHDDSVMSVQ 599 (888)
T ss_pred e---EEEEEec--ceeeeeeecccccc--eeEEeccCCcCeEEeccC-CCceEEeccccchhh---hhhhcccCceeEEE
Confidence 2 2455544 22211112321111 135678999997754433 334567777764421 22333333322 22
Q ss_pred eeecCCEEEEEecCcc
Q 004866 268 VEHHEGFLYLFTDAAK 283 (726)
Q Consensus 268 ~~~~g~~l~~~t~~~~ 283 (726)
+-| ..+++|.+.+++
T Consensus 600 F~P-~~~~FFt~gKD~ 614 (888)
T KOG0306|consen 600 FLP-KTHLFFTCGKDG 614 (888)
T ss_pred Ecc-cceeEEEecCcc
Confidence 223 566777766553
No 393
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=86.85 E-value=46 Score=35.36 Aligned_cols=155 Identities=7% Similarity=0.086 Sum_probs=86.9
Q ss_pred eeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 171 NIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 171 ~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+.|.-+-+.++.+... ...|.++|+.+++ ...+.+.. .. .-.+.|.|..-.++++.... ..+-+.|+..
T Consensus 248 ~Ls~n~~~~nVLaSgsa----D~TV~lWD~~~g~p~~s~~~~~--k~-Vq~l~wh~~~p~~LLsGs~D--~~V~l~D~R~ 318 (463)
T KOG0270|consen 248 ALSWNRNFRNVLASGSA----DKTVKLWDVDTGKPKSSITHHG--KK-VQTLEWHPYEPSVLLSGSYD--GTVALKDCRD 318 (463)
T ss_pred HHHhccccceeEEecCC----CceEEEEEcCCCCcceehhhcC--Cc-eeEEEecCCCceEEEecccc--ceEEeeeccC
Confidence 56788887888776432 3478889998887 33332221 11 22467877766655554432 3466667653
Q ss_pred CCCCeEEeeccCCceE-EeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeee--C
Q 004866 250 PFSGLTLIWECEGLAH-CIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC--K 326 (726)
Q Consensus 250 ~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~--~ 326 (726)
+...-+.. .-.+.++ ..|.|.....++.+..+ ..|+.+|.. +++..-|+.. .++. .|.++... .
T Consensus 319 ~~~s~~~w-k~~g~VEkv~w~~~se~~f~~~tdd--------G~v~~~D~R-~~~~~vwt~~-AHd~--~ISgl~~n~~~ 385 (463)
T KOG0270|consen 319 PSNSGKEW-KFDGEVEKVAWDPHSENSFFVSTDD--------GTVYYFDIR-NPGKPVWTLK-AHDD--EISGLSVNIQT 385 (463)
T ss_pred ccccCceE-EeccceEEEEecCCCceeEEEecCC--------ceEEeeecC-CCCCceeEEE-eccC--CcceEEecCCC
Confidence 22111111 1122222 34555555445554433 238888887 7766677643 4543 46666555 3
Q ss_pred CEEEEEEEeCCeeEEEEEecC
Q 004866 327 THMALILREGRTYRLCSVSLP 347 (726)
Q Consensus 327 ~~lv~~~~~~g~~~l~~~~l~ 347 (726)
..++.+...++.-.|+.++.+
T Consensus 386 p~~l~t~s~d~~Vklw~~~~~ 406 (463)
T KOG0270|consen 386 PGLLSTASTDKVVKLWKFDVD 406 (463)
T ss_pred CcceeeccccceEEEEeecCC
Confidence 577777777777777766654
No 394
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=86.44 E-value=5.6 Score=40.21 Aligned_cols=119 Identities=18% Similarity=0.186 Sum_probs=70.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce------eccccccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL------CSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~------~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
...++|||.++++|..+ |... |-|.-.+..+. +...+...+..+.|.|++-.|+-...|..-|-...|+
T Consensus 103 At~V~WsP~enkFAVgS---gar~--isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayI 177 (361)
T KOG1523|consen 103 ATCVKWSPKENKFAVGS---GARL--ISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYI 177 (361)
T ss_pred eeeEeecCcCceEEecc---CccE--EEEEEEecccceehhhhhCCccccceeeeeccCCcceecccccCcceeEEEEee
Confidence 34568999999999874 3323 34444433321 1122234567899999987776665554444445667
Q ss_pred EEcCCCCc-----ee-----EEeee-cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 198 SIIGSTDE-----DA-----LLLEE-SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 198 ~~l~t~~~-----~~-----lv~~~-~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
..+++... .. ++.+- ....+.-++.|||+|..|.+...+. -+.+.|...+
T Consensus 178 K~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds---~v~~~da~~p 238 (361)
T KOG1523|consen 178 KGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDS---TVSFVDAAGP 238 (361)
T ss_pred eccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCC---ceEEeecCCC
Confidence 77654421 11 12121 1223344688999999999877643 4677776654
No 395
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=85.78 E-value=14 Score=39.55 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=58.7
Q ss_pred EEEEEEEECCCCceecccccc--c--cceeEE--ecCCCEEEEEEecCCCCCceEEEEEc-CCCC-ceeEEeeecC----
Q 004866 147 YFTLSVRNLNSGALCSKPQAV--R--VSNIAW--AKDGQALIYVVTDQNKRPYQIYCSII-GSTD-EDALLLEESN---- 214 (726)
Q Consensus 147 ~~~l~v~dl~tg~~~~~~~~~--~--~~~~~W--spDg~~l~y~~~~~~~~~~~l~~~~l-~t~~-~~~lv~~~~d---- 214 (726)
...|+|||+.+.+.++....+ . .-.+.| .|+...=|.... -...||++-- ..+. ....|.+-+.
T Consensus 221 G~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~a----Lss~i~~~~k~~~g~W~a~kVi~ip~~~v~ 296 (461)
T PF05694_consen 221 GHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCA----LSSSIWRFYKDDDGEWAAEKVIDIPAKKVE 296 (461)
T ss_dssp --EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE------EEEEEEEE-ETTEEEEEEEEEE--EE--
T ss_pred cCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEe----ccceEEEEEEcCCCCeeeeEEEECCCcccC
Confidence 357999999999887753322 1 123444 454443333322 2235655433 2222 1111211111
Q ss_pred --------------CceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeecc-------------------C
Q 004866 215 --------------ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWEC-------------------E 261 (726)
Q Consensus 215 --------------~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~-------------------~ 261 (726)
+....++..|.|.|+|+++..-. .++..+|+.++. .++.+-.- .
T Consensus 297 ~~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~--GdvrqYDISDP~-~Pkl~gqv~lGG~~~~~~~~~v~g~~l~ 373 (461)
T PF05694_consen 297 GWILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLH--GDVRQYDISDPF-NPKLVGQVFLGGSIRKGDHPVVKGKRLR 373 (461)
T ss_dssp SS---GGGGGG-EE------EEE-TTS-EEEEEETTT--TEEEEEE-SSTT-S-EEEEEEE-BTTTT-B--TTS------
T ss_pred cccccccccccccCCCceEeEEEccCCCEEEEEcccC--CcEEEEecCCCC-CCcEEeEEEECcEeccCCCccccccccC
Confidence 23346788999999999988744 468888988864 33332210 0
Q ss_pred Cc-eEEeeeecCCEEEEEec
Q 004866 262 GL-AHCIVEHHEGFLYLFTD 280 (726)
Q Consensus 262 ~~-~~~~~~~~g~~l~~~t~ 280 (726)
++ .-..++-||++||+.+.
T Consensus 374 GgPqMvqlS~DGkRlYvTnS 393 (461)
T PF05694_consen 374 GGPQMVQLSLDGKRLYVTNS 393 (461)
T ss_dssp S----EEE-TTSSEEEEE--
T ss_pred CCCCeEEEccCCeEEEEEee
Confidence 01 12356778999998765
No 396
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=85.55 E-value=5.9 Score=39.44 Aligned_cols=113 Identities=12% Similarity=0.124 Sum_probs=71.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCcee-ccc-c------ccccceeEEec--CCCEEEEEEecCCCCC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC-SKP-Q------AVRVSNIAWAK--DGQALIYVVTDQNKRP 192 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~-~~~-~------~~~~~~~~Wsp--Dg~~l~y~~~~~~~~~ 192 (726)
.+..+.|-|++.+||-..+ ..|.+|+++.+..+ ... . ...+.+-.||| ||..++.+ .+
T Consensus 125 ~i~cvew~Pns~klasm~d------n~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d----- 192 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMDD------NNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SD----- 192 (370)
T ss_pred ceeeEEEcCCCCeeEEecc------CceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CC-----
Confidence 4566789999999988752 24889999887552 211 1 12456778999 78777665 22
Q ss_pred ceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 193 YQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 193 ~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
..++.+|+.|...-- -.+........++.+.|+.++++++..+.+ .|.++|+...
T Consensus 193 ~tl~~~D~RT~~~~~-sI~dAHgq~vrdlDfNpnkq~~lvt~gDdg--yvriWD~R~t 247 (370)
T KOG1007|consen 193 STLQFWDLRTMKKNN-SIEDAHGQRVRDLDFNPNKQHILVTCGDDG--YVRIWDTRKT 247 (370)
T ss_pred CcEEEEEccchhhhc-chhhhhcceeeeccCCCCceEEEEEcCCCc--cEEEEeccCC
Confidence 257777877653211 112222223346778999999888776554 4566676553
No 397
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=85.52 E-value=11 Score=39.47 Aligned_cols=195 Identities=7% Similarity=-0.038 Sum_probs=96.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+....||++|.++.- .|.+| .|.+|++.-........ .+.+..+++||....| .+..++. .|.+.|.
T Consensus 140 ~Vr~m~ws~~g~wmiS-gD~gG----~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF-~t~SdDg----~ikiWdf 209 (464)
T KOG0284|consen 140 PVRTMKWSHNGTWMIS-GDKGG----MIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKF-LTCSDDG----TIKIWDF 209 (464)
T ss_pred cceeEEEccCCCEEEE-cCCCc----eEEecccchhhhHHhhHhhhhhhheeccCCCCcee-EEecCCC----eEEEEec
Confidence 5777899999999744 45555 47888876543332211 3567789999955444 4444432 5666666
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCc-eEEeeeecCCEEEEEe
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL-AHCIVEHHEGFLYLFT 279 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~-~~~~~~~~g~~l~~~t 279 (726)
..+.+++++ ... ....-.+.|.|....|+ +.... +-|-++|..++. .+..+.....- ....+.+++..|+-.+
T Consensus 210 ~~~kee~vL-~GH-gwdVksvdWHP~kgLia-sgskD--nlVKlWDprSg~-cl~tlh~HKntVl~~~f~~n~N~Llt~s 283 (464)
T KOG0284|consen 210 RMPKEERVL-RGH-GWDVKSVDWHPTKGLIA-SGSKD--NLVKLWDPRSGS-CLATLHGHKNTVLAVKFNPNGNWLLTGS 283 (464)
T ss_pred cCCchhhee-ccC-CCCcceeccCCccceeE-EccCC--ceeEeecCCCcc-hhhhhhhccceEEEEEEcCCCCeeEEcc
Confidence 555533333 111 11123578888665444 33322 256677776642 11111111111 1234456665444332
Q ss_pred cCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEe
Q 004866 280 DAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVS 345 (726)
Q Consensus 280 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~ 345 (726)
++. ..+++.+.. ......+-.+..++.-..+.+....|+.+.-.+|.-..+.++
T Consensus 284 -kD~------~~kv~DiR~-----mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dgsvvh~~v~ 337 (464)
T KOG0284|consen 284 -KDQ------SCKVFDIRT-----MKELFTYRGHKKDVTSLTWHPLNESLFTSGGSDGSVVHWVVG 337 (464)
T ss_pred -CCc------eEEEEehhH-----hHHHHHhhcchhhheeeccccccccceeeccCCCceEEEecc
Confidence 221 233333321 111111112233333334455566777777667765555554
No 398
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=84.92 E-value=18 Score=38.27 Aligned_cols=116 Identities=10% Similarity=0.049 Sum_probs=73.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCC--ceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG--ALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg--~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
.+...+|+|-...|--++..++ .|.|+|+.++ +...... ...+..++|.|=+..|+-+..- ...|.++
T Consensus 229 ~VeDV~~h~~h~~lF~sv~dd~----~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~----D~tV~Lw 300 (422)
T KOG0264|consen 229 VVEDVAWHPLHEDLFGSVGDDG----KLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSA----DKTVALW 300 (422)
T ss_pred ceehhhccccchhhheeecCCC----eEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccC----CCcEEEe
Confidence 5677889998887754443333 5999999964 2111111 3356678999988888777532 2368888
Q ss_pred EcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 199 IIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 199 ~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
|+..-......++...+. ...+.|||..+.|+.++. ....+.++|+..
T Consensus 301 DlRnL~~~lh~~e~H~de-v~~V~WSPh~etvLASSg--~D~rl~vWDls~ 348 (422)
T KOG0264|consen 301 DLRNLNKPLHTFEGHEDE-VFQVEWSPHNETVLASSG--TDRRLNVWDLSR 348 (422)
T ss_pred echhcccCceeccCCCcc-eEEEEeCCCCCceeEecc--cCCcEEEEeccc
Confidence 876554333344433333 346899999999886665 345566677754
No 399
>PF03283 PAE: Pectinacetylesterase
Probab=84.89 E-value=1.5 Score=46.58 Aligned_cols=40 Identities=18% Similarity=0.161 Sum_probs=34.0
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 553 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
...-+.+++++|.++++-++++|.+.|.|+||+-++.-+.
T Consensus 136 G~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 136 GYRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred cHHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 3456788999999999999999999999999988876543
No 400
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=84.15 E-value=1.1 Score=43.13 Aligned_cols=86 Identities=12% Similarity=0.004 Sum_probs=54.9
Q ss_pred CCcEEEEEccCCCCCCCCc-ccccccccCCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcC----C-
Q 004866 522 RGWVVAFADVRGGGGGGKK-WHHDGRRTKKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCC----P- 595 (726)
Q Consensus 522 ~G~~v~~~d~RG~g~~g~~-~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~----p- 595 (726)
.-..|++|-||-..-+... -............+.|+.+|.++.+++- -+...+.|.|||.|+.+...++..+ |
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~-n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl 122 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANY-NNGRPFILAGHSQGSMHLLRLLKEEIAGDPL 122 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhc-CCCCCEEEEEeChHHHHHHHHHHHHhcCchH
Confidence 3467889999965532211 0111111123357899999999888753 2345899999999999999998764 2
Q ss_pred --CceeEEEEeCCcc
Q 004866 596 --DLFRAVVLEVPFL 608 (726)
Q Consensus 596 --~~f~a~v~~~p~~ 608 (726)
.++.|-+...++.
T Consensus 123 ~~rLVAAYliG~~v~ 137 (207)
T PF11288_consen 123 RKRLVAAYLIGYPVT 137 (207)
T ss_pred HhhhheeeecCcccc
Confidence 2445555444543
No 401
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=84.15 E-value=17 Score=40.11 Aligned_cols=79 Identities=16% Similarity=0.206 Sum_probs=51.9
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
...++||+.++++.... +|+ |.++|..++-............++|.|||.-|+.. . ...+|...|++-..
T Consensus 263 ~~ca~sp~E~kLvlGC~-DgS----iiLyD~~~~~t~~~ka~~~P~~iaWHp~gai~~V~-s----~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 263 ICCARSPSEDKLVLGCE-DGS----IILYDTTRGVTLLAKAEFIPTLIAWHPDGAIFVVG-S----EQGELQCFDMALSP 332 (545)
T ss_pred eEEecCcccceEEEEec-CCe----EEEEEcCCCeeeeeeecccceEEEEcCCCcEEEEE-c----CCceEEEEEeecCc
Confidence 34578999999999863 453 89999877743322123345678999999766554 2 23478888887665
Q ss_pred -ceeEEeeec
Q 004866 205 -EDALLLEES 213 (726)
Q Consensus 205 -~~~lv~~~~ 213 (726)
.-.++-++.
T Consensus 333 i~~qLlsEd~ 342 (545)
T PF11768_consen 333 IKMQLLSEDA 342 (545)
T ss_pred cceeeccccC
Confidence 334444443
No 402
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=83.87 E-value=1.7 Score=42.99 Aligned_cols=38 Identities=16% Similarity=0.131 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 554 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
+.++...+..+.++ -...+|.+.|||+||.++..++..
T Consensus 111 ~~~~~~~~~~~~~~--~p~~~i~vtGHSLGGaiA~l~a~~ 148 (229)
T cd00519 111 YNQVLPELKSALKQ--YPDYKIIVTGHSLGGALASLLALD 148 (229)
T ss_pred HHHHHHHHHHHHhh--CCCceEEEEccCHHHHHHHHHHHH
Confidence 34444444444443 234689999999999999887664
No 403
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=83.73 E-value=6.1 Score=37.81 Aligned_cols=81 Identities=21% Similarity=0.134 Sum_probs=47.6
Q ss_pred cchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHH-HHHHHcCCCCCCcEEEEEecccHHHHHH
Q 004866 511 RWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCA-RFLIEKEIVKEHKLAGWGYSAGGLLVAA 589 (726)
Q Consensus 511 ~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~-~~l~~~~~~d~~ri~i~G~S~GG~l~~~ 589 (726)
.|......|. ..+.|+.++.+|.+.. .. ....++++.... +.+.+ .....++.++|+|+||.++..
T Consensus 14 ~~~~~~~~l~-~~~~v~~~~~~g~~~~-~~---------~~~~~~~~~~~~~~~l~~--~~~~~~~~l~g~s~Gg~~a~~ 80 (212)
T smart00824 14 EYARLAAALR-GRRDVSALPLPGFGPG-EP---------LPASADALVEAQAEAVLR--AAGGRPFVLVGHSSGGLLAHA 80 (212)
T ss_pred HHHHHHHhcC-CCccEEEecCCCCCCC-CC---------CCCCHHHHHHHHHHHHHH--hcCCCCeEEEEECHHHHHHHH
Confidence 3444455554 4688999999987531 11 113445544432 22322 223467899999999999877
Q ss_pred HHHc---CCCceeEEEEe
Q 004866 590 AINC---CPDLFRAVVLE 604 (726)
Q Consensus 590 ~~~~---~p~~f~a~v~~ 604 (726)
.+.+ .+.....++..
T Consensus 81 ~a~~l~~~~~~~~~l~~~ 98 (212)
T smart00824 81 VAARLEARGIPPAAVVLL 98 (212)
T ss_pred HHHHHHhCCCCCcEEEEE
Confidence 7764 34445555544
No 404
>PRK13615 lipoprotein LpqB; Provisional
Probab=83.67 E-value=84 Score=35.54 Aligned_cols=158 Identities=11% Similarity=-0.016 Sum_probs=82.3
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
..+.+|+||+.+|+.. ..+ .|++-... +.............+.|.++| +++-. .+.. ...+.+.. .++.
T Consensus 337 ~s~avS~dg~~~A~v~-~~~----~l~vg~~~-~~~~~~~~~~~Lt~PS~d~~g-~vWtv-~~g~--~~~l~~~~-~~G~ 405 (557)
T PRK13615 337 DAATLSADGRQAAVRN-ASG----VWSVGDGD-RDAVLLDTRPGLVAPSLDAQG-YVWST-PASD--PRGLVAWG-PDGV 405 (557)
T ss_pred ccceEcCCCceEEEEc-CCc----eEEEecCC-CcceeeccCCccccCcCcCCC-CEEEE-eCCC--ceEEEEec-CCCc
Confidence 5678999999999983 222 57776654 333333223346788999988 56533 3322 22333322 2222
Q ss_pred ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEe-ec------cCCc-eEEeeeecCCEEE
Q 004866 205 EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLI-WE------CEGL-AHCIVEHHEGFLY 276 (726)
Q Consensus 205 ~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l-~~------~~~~-~~~~~~~~g~~l~ 276 (726)
...+-..-....-...+..|+||-.+++.....+...|++.-+....+.++.| .. .... ....| -+++.|.
T Consensus 406 ~~~v~v~~~~~~~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~W-~~~~~la 484 (557)
T PRK13615 406 GHPVAVSWTATGRVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATW-VDELDVA 484 (557)
T ss_pred eEEeeccccCCCeeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEeeeccEEcccCcCcceeeEE-cCCCEEE
Confidence 11111111122234568899999999887765555566663332222323334 21 1111 11223 4566787
Q ss_pred EEecCcccCCCCCCeEEEEeeCC
Q 004866 277 LFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 277 ~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
+++...+. +..++.+++.
T Consensus 485 Vl~~~~~~-----~~~v~~v~v~ 502 (557)
T PRK13615 485 TLTLAPDG-----ERQVELHQVG 502 (557)
T ss_pred EEeccCCC-----CceEEEEECC
Confidence 87743332 3456677776
No 405
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=83.57 E-value=13 Score=39.40 Aligned_cols=115 Identities=9% Similarity=0.096 Sum_probs=70.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+..++|+|=+..|.-+.+.++ +|.++|+..-.....+. .+.+..+.|||+...++-++.. ...|.++|
T Consensus 274 ~vn~~~fnp~~~~ilAT~S~D~----tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~----D~rl~vWD 345 (422)
T KOG0264|consen 274 EVNCVAFNPFNEFILATGSADK----TVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGT----DRRLNVWD 345 (422)
T ss_pred ceeEEEeCCCCCceEEeccCCC----cEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEeccc----CCcEEEEe
Confidence 4556688887776655544333 59999997754332222 4467889999999999877532 23566666
Q ss_pred cCCCCc-----------eeEEeeecCCc-eEEEEEEcCCCcEEEEEEcCCCceEEEEE
Q 004866 200 IGSTDE-----------DALLLEESNEN-VYVNIRHTKDFHFVCVHTFSTTSSKVFLI 245 (726)
Q Consensus 200 l~t~~~-----------~~lv~~~~d~~-~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 245 (726)
+..-.+ ..++|.-.... -..++.|.|..-+++.++.....-+||.+
T Consensus 346 ls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~ 403 (422)
T KOG0264|consen 346 LSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQM 403 (422)
T ss_pred ccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeec
Confidence 643221 12333222111 12367899999998888877655566654
No 406
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=83.30 E-value=3.5 Score=42.29 Aligned_cols=113 Identities=9% Similarity=0.137 Sum_probs=68.0
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc-eecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA-LCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~-~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
..++|+|.+ ..|+ .++|.+.||..|...-+ ++.+-. ...+.++.|||-|+-|+-.++|. .|.++.+.
T Consensus 233 N~IswnPea--fnF~---~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDk-----sIRIf~~~ 302 (433)
T KOG0268|consen 233 NTICWNPEA--FNFV---AANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDK-----SIRIFPVN 302 (433)
T ss_pred cceecCccc--ccee---eccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccc-----eEEEeecC
Confidence 457899922 3344 36778899999975432 222211 23567789999999887766654 24444544
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+. .+-+|....-.....+.||-|.+||+- .++...-.||...+..
T Consensus 303 ~~~-SRdiYhtkRMq~V~~Vk~S~Dskyi~S-GSdd~nvRlWka~Ase 348 (433)
T KOG0268|consen 303 HGH-SRDIYHTKRMQHVFCVKYSMDSKYIIS-GSDDGNVRLWKAKASE 348 (433)
T ss_pred CCc-chhhhhHhhhheeeEEEEeccccEEEe-cCCCcceeeeecchhh
Confidence 432 223444333333456889999999863 3333445777777654
No 407
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=83.21 E-value=18 Score=41.59 Aligned_cols=110 Identities=16% Similarity=0.173 Sum_probs=67.8
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEE-CC-CCceecccc--c--cccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRN-LN-SGALCSKPQ--A--VRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~d-l~-tg~~~~~~~--~--~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
....++||.++++|-+ +.+|. |.||. .. ++....-+. + ..+..++||+||.+||=. ++-..+.+
T Consensus 208 ~t~~~~spn~~~~Aa~-d~dGr----I~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSG-----G~E~VLv~ 277 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAG-DSDGR----ILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSG-----GREGVLVL 277 (792)
T ss_pred ceeEEeccccceEEEe-ccCCc----EEEEeccccccccccceEEEecccccceeEEecCCceEeec-----ccceEEEE
Confidence 4456899999999887 45563 66654 43 232222111 2 356789999999877532 33446778
Q ss_pred EEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 198 SIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+.++++. ...+-. -.. -..++.+|||+....+... ++.|.++.+.+
T Consensus 278 Wq~~T~~-kqfLPR-Lgs-~I~~i~vS~ds~~~sl~~~---DNqI~li~~~d 323 (792)
T KOG1963|consen 278 WQLETGK-KQFLPR-LGS-PILHIVVSPDSDLYSLVLE---DNQIHLIKASD 323 (792)
T ss_pred EeecCCC-cccccc-cCC-eeEEEEEcCCCCeEEEEec---CceEEEEeccc
Confidence 8888876 223321 111 2346788999988766655 34666666543
No 408
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=83.17 E-value=57 Score=33.24 Aligned_cols=58 Identities=17% Similarity=0.260 Sum_probs=42.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVV 185 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~ 185 (726)
++..+++.|.|+ ||.++..++ .|..|||-.|+.-.... ......+.|+|.|.+++...
T Consensus 129 ~Vt~lsiHPS~K-LALsVg~D~----~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~ 187 (362)
T KOG0294|consen 129 QVTDLSIHPSGK-LALSVGGDQ----VLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSG 187 (362)
T ss_pred ccceeEecCCCc-eEEEEcCCc----eeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEe
Confidence 578889999998 577663322 48999999887544333 33456699999999988864
No 409
>KOG4328 consensus WD40 protein [Function unknown]
Probab=83.17 E-value=48 Score=35.40 Aligned_cols=118 Identities=11% Similarity=0.046 Sum_probs=71.3
Q ss_pred EeeceeeCCCCC-EEEEEEeCCCCcEEEEEEEECCCCceecccc------ccccceeEEecCCCEEEEEE-ecCCCCCce
Q 004866 123 YEELSEVSPDHK-FLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ------AVRVSNIAWAKDGQALIYVV-TDQNKRPYQ 194 (726)
Q Consensus 123 ~~~~~~~SPDG~-~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~------~~~~~~~~WspDg~~l~y~~-~~~~~~~~~ 194 (726)
.+...+|.|-.. .|+.+-|..| +|-+||+.+.+...... ...++.+.|+|-+..-+|.. +|. .
T Consensus 188 Rit~l~fHPt~~~~lva~GdK~G----~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDG-----t 258 (498)
T KOG4328|consen 188 RITSLAFHPTENRKLVAVGDKGG----QVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDG-----T 258 (498)
T ss_pred ceEEEEecccCcceEEEEccCCC----cEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCc-----e
Confidence 466678999877 5555556666 58999997544332211 23467889999776555543 342 5
Q ss_pred EEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCC
Q 004866 195 IYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFS 252 (726)
Q Consensus 195 l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~ 252 (726)
|...|+.....+.+.-...+...|.+..++.+...+++..+-+ ..-++|+.++..
T Consensus 259 iR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G---~f~~iD~R~~~s 313 (498)
T KOG4328|consen 259 IRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVG---NFNVIDLRTDGS 313 (498)
T ss_pred eeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeeccc---ceEEEEeecCCc
Confidence 7777877665322222223444566777888888777766544 445556655433
No 410
>PLN02454 triacylglycerol lipase
Probab=83.10 E-value=1.8 Score=46.25 Aligned_cols=40 Identities=18% Similarity=0.121 Sum_probs=29.9
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 553 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
..+++.+.++.|+++---.+-+|.++|||+||.|+..++.
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~ 247 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAF 247 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHH
Confidence 4567788888888653222236999999999999988875
No 411
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=82.89 E-value=20 Score=37.21 Aligned_cols=117 Identities=10% Similarity=0.041 Sum_probs=70.8
Q ss_pred eEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec---ccc-ccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 121 YAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS---KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 121 ~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~---~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
..++.+++|||..+-+.++.+.+|+ |.|||+.++.... ... ...+..+.|+-+-..|+.- .|. ..+-
T Consensus 257 ~~SVEDLqWSptE~~vfaScS~Dgs----IrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG-~Dd----Gt~~ 327 (440)
T KOG0302|consen 257 TKSVEDLQWSPTEDGVFASCSCDGS----IRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASG-GDD----GTLS 327 (440)
T ss_pred ccchhhhccCCccCceEEeeecCce----EEEEEecCCCccceeEeeccCCceeeEEccCCcceeeec-CCC----ceEE
Confidence 3478889999999999888887774 9999999984332 111 3355668998776633332 222 2344
Q ss_pred EEEcCCCC--ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 197 CSIIGSTD--EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 197 ~~~l~t~~--~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
++||..-+ ..+..|.-...+ ...+.|+|....++..+.. .++|.++|++-
T Consensus 328 iwDLR~~~~~~pVA~fk~Hk~p-ItsieW~p~e~s~iaasg~--D~QitiWDlsv 379 (440)
T KOG0302|consen 328 IWDLRQFKSGQPVATFKYHKAP-ITSIEWHPHEDSVIAASGE--DNQITIWDLSV 379 (440)
T ss_pred EEEhhhccCCCcceeEEeccCC-eeEEEeccccCceEEeccC--CCcEEEEEeec
Confidence 44553322 223344333333 2468899988776654443 35566666643
No 412
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=82.26 E-value=52 Score=32.12 Aligned_cols=54 Identities=13% Similarity=0.204 Sum_probs=34.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQAL 181 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l 181 (726)
.+-....|-|..++|-. +|+ -.+++||++||+..+... ...+..+.|..++.-+
T Consensus 61 EVlD~~~s~Dnskf~s~---GgD--k~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv 116 (307)
T KOG0316|consen 61 EVLDAALSSDNSKFASC---GGD--KAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVV 116 (307)
T ss_pred eeeeccccccccccccC---CCC--ceEEEEEcccCeeeeecccccceeeEEEecCcceEE
Confidence 34455678888887532 333 468999999998776433 3355667776665433
No 413
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=82.23 E-value=1.3e+02 Score=36.61 Aligned_cols=75 Identities=12% Similarity=0.165 Sum_probs=41.7
Q ss_pred eeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCC
Q 004866 171 NIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAA 248 (726)
Q Consensus 171 ~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~ 248 (726)
.+.|--||+.++...........++..++-. +.-+ -..++...-...++|-|.|..|+......+.++|....-.
T Consensus 200 ~IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Ln--s~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN 274 (1265)
T KOG1920|consen 200 SISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALN--STSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN 274 (1265)
T ss_pred eEEEccCCcEEEEEEEeccCCceeEEEeccc-chhh--cccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC
Confidence 4899999998888655433332345555543 2100 0011222222347889999888766655555566666543
No 414
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=81.99 E-value=13 Score=30.46 Aligned_cols=52 Identities=12% Similarity=0.001 Sum_probs=36.4
Q ss_pred EEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 147 YFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 147 ~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
.-.|..+|+.|++...+.. .....+++-|+|++.|+++..- ..+|.++.|..
T Consensus 36 ~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~Et~----~~Ri~rywl~G 88 (89)
T PF03088_consen 36 TGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAETG----RYRILRYWLKG 88 (89)
T ss_dssp -EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEEGG----GTEEEEEESSS
T ss_pred CcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEecc----CceEEEEEEeC
Confidence 3469999999998654432 3344679999999999998643 35788887753
No 415
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.84 E-value=17 Score=43.09 Aligned_cols=149 Identities=9% Similarity=0.001 Sum_probs=84.9
Q ss_pred EeeceeeCCCCC-EEEEEEeCCCCcEEEEEEEECCCCceeccc-----cccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 123 YEELSEVSPDHK-FLAYTMYDKDNDYFTLSVRNLNSGALCSKP-----QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 123 ~~~~~~~SPDG~-~la~~~~~~g~e~~~l~v~dl~tg~~~~~~-----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
.+.++.|+|.+. .||=.. .+ .+|+|||+..-+ .+.+ ..+.+..++|...-..|+-..... .+..
T Consensus 118 ~V~gLDfN~~q~nlLASGa-~~----geI~iWDlnn~~-tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~s----g~~~ 187 (1049)
T KOG0307|consen 118 PVLGLDFNPFQGNLLASGA-DD----GEILIWDLNKPE-TPFTPGSQAPPSEIKCLSWNRKVSHILASGSPS----GRAV 187 (1049)
T ss_pred ceeeeeccccCCceeeccC-CC----CcEEEeccCCcC-CCCCCCCCCCcccceEeccchhhhHHhhccCCC----CCce
Confidence 566789999988 555432 22 359999997632 1211 133567788876666665543322 2455
Q ss_pred EEEcCCCCceeEEeeecCC-ceEEEEEEcCCCcEEEE-EEcCCCceEEEEEeCCCCCCCeEEeeccCCce-EEeeeecCC
Q 004866 197 CSIIGSTDEDALLLEESNE-NVYVNIRHTKDFHFVCV-HTFSTTSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEG 273 (726)
Q Consensus 197 ~~~l~t~~~~~lv~~~~d~-~~~~~~~~s~Dg~~l~~-~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~ 273 (726)
++|+...+ .++-+.+... .....+.|.||...-++ .+.++....|-++|+.......+.+.....++ ...|.+.+.
T Consensus 188 iWDlr~~~-pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~ 266 (1049)
T KOG0307|consen 188 IWDLRKKK-PIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDP 266 (1049)
T ss_pred eccccCCC-cccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCc
Confidence 66775442 2222222222 22346899999865444 44555557788888765444444443333343 345666666
Q ss_pred EEEEEecCc
Q 004866 274 FLYLFTDAA 282 (726)
Q Consensus 274 ~l~~~t~~~ 282 (726)
+|++.+-.+
T Consensus 267 ~lllSsgkD 275 (1049)
T KOG0307|consen 267 RLLLSSGKD 275 (1049)
T ss_pred hhhhcccCC
Confidence 777766544
No 416
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=81.70 E-value=5.2 Score=43.45 Aligned_cols=100 Identities=20% Similarity=0.154 Sum_probs=54.4
Q ss_pred CCCccEEEEEcCCCCCCCC-----------------ccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCc
Q 004866 491 ENQNPGLLHGHGAYGELLD-----------------KRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNS 553 (726)
Q Consensus 491 ~~~~P~vl~~hGg~~~~~~-----------------~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~ 553 (726)
..+.|+|++.-||||.+.. |.+...--.|.+.+ .++.+|.+=+.||.++-. ..........
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~a-dLvFiDqPvGTGfS~a~~-~e~~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFA-DLVFIDQPVGTGFSRALG-DEKKKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCC-ceEEEecCcccCcccccc-cccccchhcc
Confidence 3568999999999985421 11100112344443 467788666666665411 1111122233
Q ss_pred HHHHHHHHHHHHHc--CC-CCCCcEEEEEecccHHHHHHHHH
Q 004866 554 IKDFISCARFLIEK--EI-VKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 554 ~~D~~~~~~~l~~~--~~-~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
-+|+....+...+. .+ -.-.+..|+|-||||+-...+|.
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 45555544444332 01 11257899999999987666554
No 417
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=81.51 E-value=4.2 Score=38.30 Aligned_cols=53 Identities=19% Similarity=0.124 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCcee-EEEEeCCcc
Q 004866 552 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFR-AVVLEVPFL 608 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~-a~v~~~p~~ 608 (726)
..+.+|.+.++... ....++.++|||||..++..++.+.+-... .++..+|=+
T Consensus 92 ~~L~~f~~gl~a~~----~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~ 145 (177)
T PF06259_consen 92 PRLARFLDGLRATH----GPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGM 145 (177)
T ss_pred HHHHHHHHHhhhhc----CCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCC
Confidence 34555555554332 345799999999999999998886333333 334444433
No 418
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=81.35 E-value=51 Score=33.35 Aligned_cols=93 Identities=9% Similarity=0.100 Sum_probs=56.8
Q ss_pred EEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC--CCce-eEEeeecCCce---EEE
Q 004866 149 TLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS--TDED-ALLLEESNENV---YVN 220 (726)
Q Consensus 149 ~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t--~~~~-~lv~~~~d~~~---~~~ 220 (726)
+|.+||+..++.+-... .+.+..+.-||+|..+.=...+ ..|.++++.- +..+ +.+|+.....| .+.
T Consensus 197 ~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd-----~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~ 271 (338)
T KOG0265|consen 197 DIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMD-----NTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK 271 (338)
T ss_pred ceeeeccccCcceEEeecccCceeeEEeccCCCcccccccc-----ceEEEEEecccCCCCceEEEeecchhhhhhhcce
Confidence 47788886665544332 3456777888888866554443 2455555532 2233 55666544433 256
Q ss_pred EEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 221 IRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 221 ~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.+|||+++++...+.+ ..+|++|...
T Consensus 272 cswsp~~~~i~ags~d---r~vyvwd~~~ 297 (338)
T KOG0265|consen 272 CSWSPNGTKITAGSAD---RFVYVWDTTS 297 (338)
T ss_pred eeccCCCCcccccccc---ceEEEeeccc
Confidence 8999999998655543 3578888755
No 419
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=81.14 E-value=2 Score=48.64 Aligned_cols=47 Identities=15% Similarity=0.238 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHc--C--CCC---CCcEEEEEecccHHHHHHHHHcCCCceeEEE
Q 004866 555 KDFISCARFLIEK--E--IVK---EHKLAGWGYSAGGLLVAAAINCCPDLFRAVV 602 (726)
Q Consensus 555 ~D~~~~~~~l~~~--~--~~d---~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v 602 (726)
+=+.+|++++.+. + .-+ |.-|.+.||||||+.+-++++ +|+..+..|
T Consensus 157 EYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~sV 210 (973)
T KOG3724|consen 157 EYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQGSV 210 (973)
T ss_pred HHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccchh
Confidence 3445677766653 2 223 778999999999988887777 576555544
No 420
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=81.11 E-value=68 Score=32.84 Aligned_cols=148 Identities=9% Similarity=0.052 Sum_probs=76.7
Q ss_pred eCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-------ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 129 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-------AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 129 ~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
--|+-.++|.++. .. -|++||.-||+...-.. .....++.|||||..||-- .. .-|...++.
T Consensus 119 ~qP~t~l~a~ssr-~~----PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaG-yk-----rcirvFdt~ 187 (406)
T KOG2919|consen 119 DQPSTNLFAVSSR-DQ----PIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAG-YK-----RCIRVFDTS 187 (406)
T ss_pred CCCccceeeeccc-cC----ceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeec-cc-----ceEEEeecc
Confidence 3588888777643 22 39999999998664221 1245678999999999753 11 134445553
Q ss_pred CCC---ceeEEeee-cC--CceEEEEEEcCCCc-EEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceE-EeeeecCC
Q 004866 202 STD---EDALLLEE-SN--ENVYVNIRHTKDFH-FVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAH-CIVEHHEG 273 (726)
Q Consensus 202 t~~---~~~lv~~~-~d--~~~~~~~~~s~Dg~-~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~ 273 (726)
.+. ....++.. .. .....-+++||-.. .+++.+.. ....||.-+-. +....+....+++. ..+-++|.
T Consensus 188 RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~-q~~giy~~~~~---~pl~llggh~gGvThL~~~edGn 263 (406)
T KOG2919|consen 188 RPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYG-QRVGIYNDDGR---RPLQLLGGHGGGVTHLQWCEDGN 263 (406)
T ss_pred CCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeeccc-ceeeeEecCCC---CceeeecccCCCeeeEEeccCcC
Confidence 222 11111111 00 11112245565443 44443321 12334443322 34455555555543 45567898
Q ss_pred EEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 274 FLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 274 ~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
+||.-+... -+|...|+.
T Consensus 264 ~lfsGaRk~--------dkIl~WDiR 281 (406)
T KOG2919|consen 264 KLFSGARKD--------DKILCWDIR 281 (406)
T ss_pred eecccccCC--------CeEEEEeeh
Confidence 887655443 246666664
No 421
>PLN02408 phospholipase A1
Probab=80.70 E-value=2.3 Score=44.69 Aligned_cols=40 Identities=15% Similarity=-0.076 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 554 IKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
.+.+.+.++.|+++---.+.+|.|.|||+||.|+..++..
T Consensus 181 r~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 181 QEMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 3456677777776422223579999999999999887764
No 422
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=80.65 E-value=62 Score=31.99 Aligned_cols=143 Identities=7% Similarity=0.050 Sum_probs=79.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc----ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ----AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~----~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
+-+++||+....++++..-+|+ |.++|+.- ...++.. ...+.++.|.+-.+.++.+.+ -...-+||.-+
T Consensus 63 LfdV~Wse~~e~~~~~a~GDGS----Lrl~d~~~-~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsS--WD~TiKLW~~~ 135 (311)
T KOG0277|consen 63 LFDVAWSENHENQVIAASGDGS----LRLFDLTM-PSKPIHKFKEHKREVYSVDWNTVRRRIFLTSS--WDGTIKLWDPN 135 (311)
T ss_pred eeEeeecCCCcceEEEEecCce----EEEeccCC-CCcchhHHHhhhhheEEeccccccceeEEeec--cCCceEeecCC
Confidence 4456899999999998765553 88888432 2222221 235678899998888888752 11223444333
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccC-CceEEeeeecCCEEEEE
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECE-GLAHCIVEHHEGFLYLF 278 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~-~~~~~~~~~~g~~l~~~ 278 (726)
. + ....+|.+.+...| ...|||--.-++.+.+.+..-.+|=++..+ . ...+.... +-....+++-+..+++.
T Consensus 136 r--~-~Sv~Tf~gh~~~Iy-~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g--k-~~~i~ah~~Eil~cdw~ky~~~vl~T 208 (311)
T KOG0277|consen 136 R--P-NSVQTFNGHNSCIY-QAAFSPHIPNLFASASGDGTLRLWDVRSPG--K-FMSIEAHNSEILCCDWSKYNHNVLAT 208 (311)
T ss_pred C--C-cceEeecCCccEEE-EEecCCCCCCeEEEccCCceEEEEEecCCC--c-eeEEEeccceeEeecccccCCcEEEe
Confidence 2 2 33445655444333 567888877776666555555555444432 2 22232222 22234555555555554
Q ss_pred ec
Q 004866 279 TD 280 (726)
Q Consensus 279 t~ 280 (726)
..
T Consensus 209 g~ 210 (311)
T KOG0277|consen 209 GG 210 (311)
T ss_pred cC
Confidence 43
No 423
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=80.60 E-value=25 Score=38.24 Aligned_cols=93 Identities=13% Similarity=0.203 Sum_probs=54.8
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-ccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+..-+|||||.-|.-+ -.+| .|.+|.- +|-.+. +.. ...+..++|.|++..++|+.. .++++..+.
T Consensus 107 ~~~gRW~~dGtgLlt~-GEDG----~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g------~h~~IKpL~ 174 (737)
T KOG1524|consen 107 ISSGRWSPDGAGLLTA-GEDG----VIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQG------GHISIKPLA 174 (737)
T ss_pred hhhcccCCCCceeeee-cCCc----eEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecC------CeEEEeecc
Confidence 4455899999987543 2233 5777775 343222 112 446778999999999999843 256666654
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEE
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFV 230 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l 230 (726)
-. ...+-....| ...+.+.|++....|
T Consensus 175 ~n-~k~i~WkAHD-GiiL~~~W~~~s~lI 201 (737)
T KOG1524|consen 175 AN-SKIIRWRAHD-GLVLSLSWSTQSNII 201 (737)
T ss_pred cc-cceeEEeccC-cEEEEeecCccccce
Confidence 32 2222222222 334567777766644
No 424
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=80.23 E-value=4.2 Score=39.97 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=26.1
Q ss_pred CcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCccccc
Q 004866 573 HKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDAT 611 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~ 611 (726)
.+++|.|.||||.++..+...++.- |+.+|+.++.
T Consensus 195 g~~~~~g~Smgg~~a~~vgS~~q~P----va~~p~l~~~ 229 (371)
T KOG1551|consen 195 GNLNLVGRSMGGDIANQVGSLHQKP----VATAPCLNSS 229 (371)
T ss_pred ccceeeeeecccHHHHhhcccCCCC----cccccccccc
Confidence 6899999999999999888755543 4445665544
No 425
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=79.98 E-value=3.5 Score=45.87 Aligned_cols=75 Identities=13% Similarity=0.165 Sum_probs=47.3
Q ss_pred chHHHHHHHHCCcEEEEEccCCCCCCCCccccccccc-CCCCcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHH
Q 004866 512 WRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRT-KKLNSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAA 590 (726)
Q Consensus 512 ~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~-~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~ 590 (726)
|...++.|++.||. --|.+|.. -.|+.+.... ....-+..+...++.+.+. ....++.|+||||||.++...
T Consensus 158 w~kLIe~L~~iGY~--~~nL~gAP---YDWRls~~~le~rd~YF~rLK~lIE~ay~~--nggkKVVLV~HSMGglv~lyF 230 (642)
T PLN02517 158 WAVLIANLARIGYE--EKNMYMAA---YDWRLSFQNTEVRDQTLSRLKSNIELMVAT--NGGKKVVVVPHSMGVLYFLHF 230 (642)
T ss_pred HHHHHHHHHHcCCC--CCceeecc---cccccCccchhhhhHHHHHHHHHHHHHHHH--cCCCeEEEEEeCCchHHHHHH
Confidence 47788999999997 45555543 3555442211 1122344555555555432 124799999999999999987
Q ss_pred HHc
Q 004866 591 INC 593 (726)
Q Consensus 591 ~~~ 593 (726)
+..
T Consensus 231 L~w 233 (642)
T PLN02517 231 MKW 233 (642)
T ss_pred HHh
Confidence 763
No 426
>PRK13613 lipoprotein LpqB; Provisional
Probab=79.89 E-value=1.1e+02 Score=35.00 Aligned_cols=123 Identities=10% Similarity=-0.015 Sum_probs=70.7
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---cc-ccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AV-RVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~-~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
.+..++|.++| . +|+.+...+....|++..- +|+...+.. .+ .+..+.-|+||.++++..... ...+|++-
T Consensus 410 ~Lt~PS~d~~g-~-vWtvd~~~~~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~--g~~~v~va 484 (599)
T PRK13613 410 RLTSPSWDGRG-D-LWVVDRDPADPRLLWLLQG-DGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKD--GRRSLQIG 484 (599)
T ss_pred cccCCcCcCCC-C-EEEecCCCCCceEEEEEcC-CCcEEEeeccccCCCEeEEEEECCCccEEEEEEecC--CCcEEEEE
Confidence 46778899998 3 5666543222223556554 566543322 22 578899999999999875432 22356654
Q ss_pred EcCCCC--ceeEEee---ecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 199 IIGSTD--EDALLLE---ESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 199 ~l~t~~--~~~lv~~---~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
.+-... ...+..- ...-.-..++.|..++..+++.........+|++++++.
T Consensus 485 ~V~R~~~G~~~l~~~~~l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~v~vdG~ 541 (599)
T PRK13613 485 RIVRDAKAVVSVEEFRSLAPELEDVTDMSWAGDSQLVVLGREEGGVQQARYVQVDGS 541 (599)
T ss_pred EEEeCCCCcEEeeccEEeccCCCccceeEEcCCCEEEEEeccCCCCcceEEEecCCc
Confidence 442221 2111100 001111357889988886555544444677999999874
No 427
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=79.51 E-value=6.5 Score=39.74 Aligned_cols=59 Identities=12% Similarity=0.108 Sum_probs=46.8
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccc----cccceeEEecCCCEEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQA----VRVSNIAWAKDGQALIYVV 185 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~----~~~~~~~WspDg~~l~y~~ 185 (726)
.++.++++-+|..||-++ ..| .-|+|+|..+|+.+..... .....++||||+++|+..+
T Consensus 183 ~Iacv~Ln~~Gt~vATaS-tkG---TLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsS 245 (346)
T KOG2111|consen 183 DIACVALNLQGTLVATAS-TKG---TLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSS 245 (346)
T ss_pred ceeEEEEcCCccEEEEec-cCc---EEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEc
Confidence 467778999999999875 455 3699999999988765442 2456789999999998874
No 428
>PLN02571 triacylglycerol lipase
Probab=79.37 E-value=2.7 Score=44.97 Aligned_cols=40 Identities=20% Similarity=0.140 Sum_probs=29.9
Q ss_pred cHHHHHHHHHHHHHcCCCCC-CcEEEEEecccHHHHHHHHHc
Q 004866 553 SIKDFISCARFLIEKEIVKE-HKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~l~~~~~~~ 593 (726)
..+++.+.++.|+++ +-+. -+|.|.|||+||.||..++..
T Consensus 206 ar~qvl~eV~~L~~~-y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 206 ARDQVLNEVGRLVEK-YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHHh-cCcccccEEEeccchHHHHHHHHHHH
Confidence 456777888888764 3232 379999999999999887753
No 429
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=78.49 E-value=55 Score=33.52 Aligned_cols=207 Identities=12% Similarity=0.120 Sum_probs=0.0
Q ss_pred cCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-----ccccceeEEecCCCEEEEEEecCCCC
Q 004866 117 RFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-----AVRVSNIAWAKDGQALIYVVTDQNKR 191 (726)
Q Consensus 117 ~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-----~~~~~~~~WspDg~~l~y~~~~~~~~ 191 (726)
+||+ ++..+++-|+.-.|..+.+.+-+ |++|++.++.-+.+.. .+.+-++.|++||++|+=.-+|...
T Consensus 133 ghG~--sINeik~~p~~~qlvls~SkD~s----vRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhsl- 205 (385)
T KOG1034|consen 133 GHGG--SINEIKFHPDRPQLVLSASKDHS----VRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSL- 205 (385)
T ss_pred ccCc--cchhhhcCCCCCcEEEEecCCce----EEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceE-
Q ss_pred CceEEEEE----------------------cCCCCceeEEeeecCC--------ceEEEEEEcCCCcEEEEEEcCCCceE
Q 004866 192 PYQIYCSI----------------------IGSTDEDALLLEESNE--------NVYVNIRHTKDFHFVCVHTFSTTSSK 241 (726)
Q Consensus 192 ~~~l~~~~----------------------l~t~~~~~lv~~~~d~--------~~~~~~~~s~Dg~~l~~~~~~~~~~~ 241 (726)
++|+++ +.+.....-.|...+. +||.++.+|+.+.--+..-..+.-.+
T Consensus 206 --k~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e 283 (385)
T KOG1034|consen 206 --KLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEE 283 (385)
T ss_pred --EEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhh
Q ss_pred EEEEeCCCCCCCeEEeeccCCce------EEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCC
Q 004866 242 VFLINAADPFSGLTLIWECEGLA------HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQ 315 (726)
Q Consensus 242 l~~~d~~~~~~~~~~l~~~~~~~------~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~ 315 (726)
-+- +...++...+.+....-.. ...+++.++.|++.-..+. +|..+++ ..++..-.++..+..
T Consensus 284 ~~~-~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~---------v~vwdL~-~~ep~~~ttl~~s~~ 352 (385)
T KOG1034|consen 284 SIH-NVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGK---------VYVWDLD-NNEPPKCTTLTHSKS 352 (385)
T ss_pred hhh-ccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCc---------EEEEECC-CCCCccCceEEeccc
Q ss_pred CceEEEEeeeC-CEEEEEEEeCCeeEEEEEe
Q 004866 316 GLVVEDVDFCK-THMALILREGRTYRLCSVS 345 (726)
Q Consensus 316 ~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~~ 345 (726)
...+....... +.+++...++| .++++|
T Consensus 353 ~~tVRQ~sfS~dgs~lv~vcdd~--~Vwrwd 381 (385)
T KOG1034|consen 353 GSTVRQTSFSRDGSILVLVCDDG--TVWRWD 381 (385)
T ss_pred cceeeeeeecccCcEEEEEeCCC--cEEEEE
No 430
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=78.44 E-value=70 Score=33.42 Aligned_cols=113 Identities=15% Similarity=0.125 Sum_probs=63.7
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCC------ceecccc---ccccceeEEecCCCEEEEEEecCCCCCc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSG------ALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPY 193 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg------~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~ 193 (726)
.+.++.||.+|++||-. ++.....||+++.- +++.+.. ..++..++|.-. .+++|+. .+..
T Consensus 58 CiNAlqFS~N~~~L~SG-----GDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~-N~~~~SG----~~~~ 127 (609)
T KOG4227|consen 58 CINALQFSHNDRFLASG-----GDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLE-NRFLYSG----ERWG 127 (609)
T ss_pred ccceeeeccCCeEEeec-----CCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccC-CeeEecC----CCcc
Confidence 67788999999988643 33456788887542 2222211 124556777654 4555652 3456
Q ss_pred eEEEEEcCCCCceeEEeeecCCc-eEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 194 QIYCSIIGSTDEDALLLEESNEN-VYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 194 ~l~~~~l~t~~~~~lv~~~~d~~-~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+|..||+.+.+ ..-|+.+.+.+ -..++..+|-...++..+..+ .+.++|...
T Consensus 128 ~VI~HDiEt~q-si~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~---~V~~~D~Rd 180 (609)
T KOG4227|consen 128 TVIKHDIETKQ-SIYVANENNNRGDVYHMDQHPTDNTLIVVTRAK---LVSFIDNRD 180 (609)
T ss_pred eeEeeecccce-eeeeecccCcccceeecccCCCCceEEEEecCc---eEEEEeccC
Confidence 89999998875 23355544421 112344566655554444322 355556544
No 431
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=77.89 E-value=71 Score=36.32 Aligned_cols=109 Identities=7% Similarity=0.071 Sum_probs=64.1
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce-ecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-CSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~-~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
+.++||++|+.|+-.. |+ .|-+.|++||.. ++... ......+.-+||++.|++.. +...+..+.+
T Consensus 23 G~~~~s~nG~~L~t~~---~d---~Vi~idv~t~~~~l~s~~~ed~d~ita~~l~~d~~~L~~a~-----rs~llrv~~L 91 (775)
T KOG0319|consen 23 GPVAWSSNGQHLYTAC---GD---RVIIIDVATGSIALPSGSNEDEDEITALALTPDEEVLVTAS-----RSQLLRVWSL 91 (775)
T ss_pred CceeECCCCCEEEEec---Cc---eEEEEEccCCceecccCCccchhhhheeeecCCccEEEEee-----ccceEEEEEc
Confidence 3478999999986653 33 388899999987 44322 23567899999998887763 3335556666
Q ss_pred CCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
.++. .+..... ...+ .+..+++|.| .|+- ..+....+-++|...
T Consensus 92 ~tgk~irswKa~-He~P-vi~ma~~~~g-~LlA--tggaD~~v~VWdi~~ 136 (775)
T KOG0319|consen 92 PTGKLIRSWKAI-HEAP-VITMAFDPTG-TLLA--TGGADGRVKVWDIKN 136 (775)
T ss_pred ccchHhHhHhhc-cCCC-eEEEEEcCCC-ceEE--eccccceEEEEEeeC
Confidence 6664 2221110 1112 1345677777 3332 222334555666654
No 432
>KOG4328 consensus WD40 protein [Function unknown]
Probab=77.72 E-value=25 Score=37.47 Aligned_cols=139 Identities=6% Similarity=0.081 Sum_probs=81.1
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc----cccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP----QAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~----~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
.++.+.+||-..--.|+++-+| +|...|++++....+. ....+..+.++.+...+++...- ....++-+
T Consensus 236 ~Vs~l~F~P~n~s~i~ssSyDG----tiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~---G~f~~iD~ 308 (498)
T KOG4328|consen 236 PVSGLKFSPANTSQIYSSSYDG----TIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNV---GNFNVIDL 308 (498)
T ss_pred cccceEecCCChhheeeeccCc----eeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecc---cceEEEEe
Confidence 5788899999888889888878 4999999987433221 23356778888888888776422 12344444
Q ss_pred EcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCe----EEeeccCCceEEeeeecCC
Q 004866 199 IIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGL----TLIWECEGLAHCIVEHHEG 273 (726)
Q Consensus 199 ~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~----~~l~~~~~~~~~~~~~~g~ 273 (726)
+.+..+ ....+ .+. -..++.+.|-..+++.++.-..+-.|| |+..-.++. -.+..+......+++|.|+
T Consensus 309 R~~~s~~~~~~l-h~k---KI~sv~~NP~~p~~laT~s~D~T~kIW--D~R~l~~K~sp~lst~~HrrsV~sAyFSPs~g 382 (498)
T KOG4328|consen 309 RTDGSEYENLRL-HKK---KITSVALNPVCPWFLATASLDQTAKIW--DLRQLRGKASPFLSTLPHRRSVNSAYFSPSGG 382 (498)
T ss_pred ecCCccchhhhh-hhc---ccceeecCCCCchheeecccCcceeee--ehhhhcCCCCcceecccccceeeeeEEcCCCC
Confidence 443322 21112 111 224577888888887776655444444 544321111 1111222233456788888
Q ss_pred E
Q 004866 274 F 274 (726)
Q Consensus 274 ~ 274 (726)
.
T Consensus 383 t 383 (498)
T KOG4328|consen 383 T 383 (498)
T ss_pred c
Confidence 8
No 433
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=76.94 E-value=18 Score=39.72 Aligned_cols=140 Identities=9% Similarity=0.093 Sum_probs=63.3
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEE-EEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC-SIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~-~~l~t 202 (726)
...++.||+|+.++.. |+..|.||- +-.. .....+....++|++.++ +++. +. ...|.+ .++..
T Consensus 35 p~~ls~npngr~v~V~----g~geY~iyt----~~~~-r~k~~G~g~~~vw~~~n~-yAv~--~~---~~~I~I~kn~~~ 99 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLVC----GDGEYEIYT----ALAW-RNKAFGSGLSFVWSSRNR-YAVL--ES---SSTIKIYKNFKN 99 (443)
T ss_dssp -SEEEE-TTSSEEEEE----ETTEEEEEE----TTTT-EEEEEEE-SEEEE-TSSE-EEEE---T---TS-EEEEETTEE
T ss_pred CeeEEECCCCCEEEEE----cCCEEEEEE----ccCC-cccccCceeEEEEecCcc-EEEE--EC---CCeEEEEEcCcc
Confidence 4566899999999883 233577765 1111 111234556799999666 3332 22 234544 34422
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecCc
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDAA 282 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~ 282 (726)
.....+ ..+ +.+.--+. |..|.+..+. .|.++|++++. ..+.+. -.......|+++|+.+.+++..
T Consensus 100 ~~~k~i--~~~---~~~~~If~--G~LL~~~~~~----~i~~yDw~~~~-~i~~i~-v~~vk~V~Ws~~g~~val~t~~- 165 (443)
T PF04053_consen 100 EVVKSI--KLP---FSVEKIFG--GNLLGVKSSD----FICFYDWETGK-LIRRID-VSAVKYVIWSDDGELVALVTKD- 165 (443)
T ss_dssp -TT-------S---S-EEEEE---SSSEEEEETT----EEEEE-TTT---EEEEES-S-E-EEEEE-TTSSEEEEE-S--
T ss_pred ccceEE--cCC---cccceEEc--CcEEEEECCC----CEEEEEhhHcc-eeeEEe-cCCCcEEEEECCCCEEEEEeCC-
Confidence 111111 111 11111112 7777666543 48999998732 222221 1111234677888888888753
Q ss_pred ccCCCCCCeEEEEeeCC
Q 004866 283 KEGQEADNHYLLRCPVD 299 (726)
Q Consensus 283 ~~~~~~~~~~l~~~~~~ 299 (726)
.+.+++.+++
T Consensus 166 -------~i~il~~~~~ 175 (443)
T PF04053_consen 166 -------SIYILKYNLE 175 (443)
T ss_dssp -------SEEEEEE-HH
T ss_pred -------eEEEEEecch
Confidence 2567766653
No 434
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=76.93 E-value=7.3 Score=41.69 Aligned_cols=100 Identities=11% Similarity=0.067 Sum_probs=67.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
++-.+..+|.|.+||..+.. .+++|....+.+..++.. +..+-++.|++-|+|++-+-.|.- -..|+..-|
T Consensus 594 QIfSLg~cP~~dWlavGMen-----s~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnl---LnawrtPyG 665 (705)
T KOG0639|consen 594 QIFSLGYCPTGDWLAVGMEN-----SNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL---LNAWRTPYG 665 (705)
T ss_pred hheecccCCCccceeeeccc-----CcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhh---hhhccCccc
Confidence 34455679999999998642 357888887777777665 445678999999999877754432 234554444
Q ss_pred CCCceeEEeeecCCceEEEEEEcCCCcEEEEEEc
Q 004866 202 STDEDALLLEESNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
. -+|+.+...-.+.+.+|-|.|||+-.+.
T Consensus 666 a-----siFqskE~SsVlsCDIS~ddkyIVTGSG 694 (705)
T KOG0639|consen 666 A-----SIFQSKESSSVLSCDISFDDKYIVTGSG 694 (705)
T ss_pred c-----ceeeccccCcceeeeeccCceEEEecCC
Confidence 3 2555554444556778999999875443
No 435
>PLN02606 palmitoyl-protein thioesterase
Probab=76.93 E-value=30 Score=35.50 Aligned_cols=101 Identities=17% Similarity=0.139 Sum_probs=56.0
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHC-CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
.+.|+|| .||-......++.....+.+.+. |.-+..+. -|.+. ++ ....+..+-+..+++.|.+....
T Consensus 25 ~~~PvVi-wHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~------~~---s~~~~~~~Qv~~vce~l~~~~~L 93 (306)
T PLN02606 25 LSVPFVL-FHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV------QD---SLFMPLRQQASIACEKIKQMKEL 93 (306)
T ss_pred CCCCEEE-ECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc------cc---ccccCHHHHHHHHHHHHhcchhh
Confidence 3467655 48843333334555666666423 66555544 23211 01 11123345555566666654333
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCC--ceeEEEEe
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPD--LFRAVVLE 604 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~ 604 (726)
++-+-++|+|.||.+.=+++.+.|+ -.+-.|..
T Consensus 94 -~~G~naIGfSQGglflRa~ierc~~~p~V~nlISl 128 (306)
T PLN02606 94 -SEGYNIVAESQGNLVARGLIEFCDNAPPVINYVSL 128 (306)
T ss_pred -cCceEEEEEcchhHHHHHHHHHCCCCCCcceEEEe
Confidence 2468899999999998888887766 24555543
No 436
>PLN02324 triacylglycerol lipase
Probab=76.31 E-value=3.6 Score=43.93 Aligned_cols=39 Identities=15% Similarity=0.114 Sum_probs=29.2
Q ss_pred cHHHHHHHHHHHHHcCCCCC-CcEEEEEecccHHHHHHHHH
Q 004866 553 SIKDFISCARFLIEKEIVKE-HKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~l~~~~~~ 592 (726)
..+.+.+.++.|+++ +-+. -+|.|+|||+||.||..++.
T Consensus 195 areqVl~eV~~L~~~-Yp~e~~sItvTGHSLGGALAtLaA~ 234 (415)
T PLN02324 195 AQEQVQGELKRLLEL-YKNEEISITFTGHSLGAVMSVLSAA 234 (415)
T ss_pred HHHHHHHHHHHHHHH-CCCCCceEEEecCcHHHHHHHHHHH
Confidence 345567778888764 3332 48999999999999988775
No 437
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=75.82 E-value=96 Score=33.28 Aligned_cols=72 Identities=15% Similarity=0.135 Sum_probs=44.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec----cc----------c--c-c---ccceeEEecCCCEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS----KP----------Q--A-V---RVSNIAWAKDGQALI 182 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~----~~----------~--~-~---~~~~~~WspDg~~l~ 182 (726)
++-.+.+|||++++ |+.+..| +|.-+++.+|+... .. . . . .+-.++-|+||++|+
T Consensus 144 s~~~vals~d~~~~-fsask~g----~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyla 218 (479)
T KOG0299|consen 144 SVTSVALSPDDKRV-FSASKDG----TILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLA 218 (479)
T ss_pred cceEEEeeccccce-eecCCCc----ceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEE
Confidence 44556789999986 6666655 47777777776331 00 0 0 1 124578899999998
Q ss_pred EEEecCCCCCceEEEEEcCCCC
Q 004866 183 YVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 183 y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
... +...|.+++..+.+
T Consensus 219 tgg-----~d~~v~Iw~~~t~e 235 (479)
T KOG0299|consen 219 TGG-----RDRHVQIWDCDTLE 235 (479)
T ss_pred ecC-----CCceEEEecCcccc
Confidence 763 23345566665553
No 438
>PLN02633 palmitoyl protein thioesterase family protein
Probab=75.38 E-value=34 Score=35.17 Aligned_cols=102 Identities=15% Similarity=0.084 Sum_probs=56.6
Q ss_pred CCccEEEEEcCCCCCCCCccchHHHHHHHHC-CcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCC
Q 004866 492 NQNPGLLHGHGAYGELLDKRWRSELKSLLDR-GWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIV 570 (726)
Q Consensus 492 ~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~-G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~ 570 (726)
.+.|+||+ ||--.....++-....+.+.+. |.-|..+.. |.+ . +++ +..+..+-+..+++.|.+....
T Consensus 24 ~~~P~Viw-HG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~-~-----~~s---~~~~~~~Qve~vce~l~~~~~l 92 (314)
T PLN02633 24 VSVPFIML-HGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG-V-----GDS---WLMPLTQQAEIACEKVKQMKEL 92 (314)
T ss_pred CCCCeEEe-cCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC-c-----ccc---ceeCHHHHHHHHHHHHhhchhh
Confidence 35676665 8742333333344444555443 565665554 222 1 111 2223445555566666653333
Q ss_pred CCCcEEEEEecccHHHHHHHHHcCCC--ceeEEEEeC
Q 004866 571 KEHKLAGWGYSAGGLLVAAAINCCPD--LFRAVVLEV 605 (726)
Q Consensus 571 d~~ri~i~G~S~GG~l~~~~~~~~p~--~f~a~v~~~ 605 (726)
++-+-++|+|.||.++=+++.+.|+ -.+-.|..+
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlg 128 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLA 128 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCCCCcceEEEec
Confidence 2468999999999998888888776 255555543
No 439
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=75.24 E-value=21 Score=39.33 Aligned_cols=112 Identities=11% Similarity=0.081 Sum_probs=72.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+..+.|.-+|.|||.+.-.+++ ..+.|.+|...... ... .+.+..+.|.|-.-+|+..+. ..|.+++
T Consensus 523 ~i~~vtWHrkGDYlatV~~~~~~--~~VliHQLSK~~sQ-~PF~kskG~vq~v~FHPs~p~lfVaTq------~~vRiYd 593 (733)
T KOG0650|consen 523 SIRQVTWHRKGDYLATVMPDSGN--KSVLIHQLSKRKSQ-SPFRKSKGLVQRVKFHPSKPYLFVATQ------RSVRIYD 593 (733)
T ss_pred ccceeeeecCCceEEEeccCCCc--ceEEEEeccccccc-CchhhcCCceeEEEecCCCceEEEEec------cceEEEe
Confidence 45667899999999998765554 46888888765433 222 445667889998777777642 2577778
Q ss_pred cCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 200 IGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 200 l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+.... ...++ +...+...++.+|.|.-|++.+.. ..+...|++-
T Consensus 594 L~kqelvKkL~---tg~kwiS~msihp~GDnli~gs~d---~k~~WfDldl 638 (733)
T KOG0650|consen 594 LSKQELVKKLL---TGSKWISSMSIHPNGDNLILGSYD---KKMCWFDLDL 638 (733)
T ss_pred hhHHHHHHHHh---cCCeeeeeeeecCCCCeEEEecCC---CeeEEEEccc
Confidence 86533 22222 122333457889999999887764 3566666654
No 440
>PLN02802 triacylglycerol lipase
Probab=75.10 E-value=4 Score=44.54 Aligned_cols=39 Identities=23% Similarity=0.188 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHcCCCCC-CcEEEEEecccHHHHHHHHHc
Q 004866 554 IKDFISCARFLIEKEIVKE-HKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 554 ~~D~~~~~~~l~~~~~~d~-~ri~i~G~S~GG~l~~~~~~~ 593 (726)
-+++++.++.|+++ +-+. -+|.|.|||+||.|+..++..
T Consensus 311 reqVl~eV~~Ll~~-Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 311 SESVVGEVRRLMEK-YKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHHh-CCCCcceEEEeccchHHHHHHHHHHH
Confidence 35667777777764 3332 479999999999999887653
No 441
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=74.88 E-value=13 Score=38.87 Aligned_cols=120 Identities=11% Similarity=0.028 Sum_probs=71.8
Q ss_pred CCcEEEeeccc---ccccCCceEEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecC
Q 004866 103 KIEQKLLDYNQ---EAERFGGYAYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKD 177 (726)
Q Consensus 103 ~~~~~lld~n~---~~~~~~~~~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspD 177 (726)
....-|.||.. ++.-++..-.+...+|+|+|++|+-.+. ...+.++|+.+-+.+.... ...+..+.|+|=
T Consensus 243 DnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~sk-----D~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~ 317 (464)
T KOG0284|consen 243 DNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSK-----DQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL 317 (464)
T ss_pred CceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccC-----CceEEEEehhHhHHHHHhhcchhhheeeccccc
Confidence 34455778853 2222221235778899999999876532 2358999998766554433 345678999999
Q ss_pred CCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEE
Q 004866 178 GQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCV 232 (726)
Q Consensus 178 g~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~ 232 (726)
...|+.+.- ....|+.+.++... .....+...+.-..+++|.|=|..|+-
T Consensus 318 ~~~lftsgg----~Dgsvvh~~v~~~~-p~~~i~~AHd~~iwsl~~hPlGhil~t 367 (464)
T KOG0284|consen 318 NESLFTSGG----SDGSVVHWVVGLEE-PLGEIPPAHDGEIWSLAYHPLGHILAT 367 (464)
T ss_pred cccceeecc----CCCceEEEeccccc-cccCCCcccccceeeeeccccceeEee
Confidence 999977632 23467777776332 111111111222236788888865543
No 442
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=74.87 E-value=82 Score=30.34 Aligned_cols=112 Identities=9% Similarity=0.157 Sum_probs=67.0
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
..+..+.+-|.|+.||-. .+.+...++|+.+|++++..- ...+..+.|||...+++-.+++ .+|.+-|
T Consensus 232 savaav~vdpsgrll~sg-----~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd-----~~ikltd 301 (350)
T KOG0641|consen 232 SAVAAVAVDPSGRLLASG-----HADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYD-----MKIKLTD 301 (350)
T ss_pred ceeEEEEECCCcceeeec-----cCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEeccc-----ceEEEee
Confidence 356777899999998754 223457889999999887532 3356678999977666555443 3676667
Q ss_pred cCCCC---ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE
Q 004866 200 IGSTD---EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI 245 (726)
Q Consensus 200 l~t~~---~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 245 (726)
+...- -..++..|..+. .+.+.|.|..-. +++++...+..+|.+
T Consensus 302 lqgdla~el~~~vv~ehkdk-~i~~rwh~~d~s-fisssadkt~tlwa~ 348 (350)
T KOG0641|consen 302 LQGDLAHELPIMVVAEHKDK-AIQCRWHPQDFS-FISSSADKTATLWAL 348 (350)
T ss_pred cccchhhcCceEEEEeccCc-eEEEEecCccce-eeeccCcceEEEecc
Confidence 64331 223333333222 356788876532 233333334455654
No 443
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=74.53 E-value=1.2e+02 Score=31.88 Aligned_cols=79 Identities=20% Similarity=0.120 Sum_probs=46.5
Q ss_pred eeceeeCCCCCEEEEEEeCC----CCc-------EEEEEEEECCC-Ccee-----ccc------cccccceeEEecCCCE
Q 004866 124 EELSEVSPDHKFLAYTMYDK----DND-------YFTLSVRNLNS-GALC-----SKP------QAVRVSNIAWAKDGQA 180 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~----g~e-------~~~l~v~dl~t-g~~~-----~~~------~~~~~~~~~WspDg~~ 180 (726)
+-+++++|||+.|..+.... |.. ...|+.+|+.+ |+.. ++. .....+.+.|.+|++.
T Consensus 149 ~E~la~~~dG~~l~~~~E~~l~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~l 228 (326)
T PF13449_consen 149 FEGLAVSPDGRTLFAAMESPLKQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRL 228 (326)
T ss_pred eEEEEECCCCCEEEEEECccccCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcE
Confidence 45678999999665543322 211 25677788876 3221 121 1235678999999985
Q ss_pred EEEEEecCC--CCCceEEEEEcCC
Q 004866 181 LIYVVTDQN--KRPYQIYCSIIGS 202 (726)
Q Consensus 181 l~y~~~~~~--~~~~~l~~~~l~t 202 (726)
|+.-|.... ....+||.+++..
T Consensus 229 LvLER~~~~~~~~~~ri~~v~l~~ 252 (326)
T PF13449_consen 229 LVLERDFSPGTGNYKRIYRVDLSD 252 (326)
T ss_pred EEEEccCCCCccceEEEEEEEccc
Confidence 555443221 2345788888754
No 444
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=74.42 E-value=11 Score=25.48 Aligned_cols=28 Identities=29% Similarity=0.389 Sum_probs=19.7
Q ss_pred CCCCEEEEEEeCCCCcEEEEEEEECCCCceec
Q 004866 131 PDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS 162 (726)
Q Consensus 131 PDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~ 162 (726)
|||++| |+++..++ .|.++|+.+++.+.
T Consensus 1 pd~~~l-yv~~~~~~---~v~~id~~~~~~~~ 28 (42)
T TIGR02276 1 PDGTKL-YVTNSGSN---TVSVIDTATNKVIA 28 (42)
T ss_pred CCCCEE-EEEeCCCC---EEEEEECCCCeEEE
Confidence 788986 55565443 58889998886554
No 445
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=73.98 E-value=18 Score=36.26 Aligned_cols=64 Identities=22% Similarity=0.308 Sum_probs=39.4
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCc-----eecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGA-----LCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~-----~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
++.|+||+.||...|. .|-++.....= ..++.. .....-++||||+..|+|.... ..|..+|
T Consensus 3 ~~~~~~Gk~lAi~qd~------~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~-----G~i~vfd 71 (282)
T PF15492_consen 3 LALSSDGKLLAILQDQ------CIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAEST-----GTIRVFD 71 (282)
T ss_pred eeecCCCcEEEEEecc------EEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCC-----CeEEEEe
Confidence 4679999999998652 24444433321 111211 2345678999999999998532 2566666
Q ss_pred cC
Q 004866 200 IG 201 (726)
Q Consensus 200 l~ 201 (726)
+-
T Consensus 72 l~ 73 (282)
T PF15492_consen 72 LM 73 (282)
T ss_pred cc
Confidence 63
No 446
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=73.67 E-value=36 Score=40.90 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=65.2
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
+.|--||+++|.+.-......-.|.|+|-+ |..-.... ..-...++|-|-|..|+-....... .+|..+.-+.-.
T Consensus 201 IsWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd--~~IvffErNGL~ 277 (1265)
T KOG1920|consen 201 ISWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSD--SDIVFFERNGLR 277 (1265)
T ss_pred EEEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCC--CcEEEEecCCcc
Confidence 579999999998654444433568999987 43222211 3345679999999888766543221 134433322211
Q ss_pred ceeEEeee-cCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEe
Q 004866 205 EDALLLEE-SNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLIN 246 (726)
Q Consensus 205 ~~~lv~~~-~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d 246 (726)
....+... .|..-..++.|..++.-|++.......+.|.++-
T Consensus 278 hg~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt 320 (1265)
T KOG1920|consen 278 HGEFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWT 320 (1265)
T ss_pred ccccccCCcccccchheeeecCCCCceeeeecccccceEEEEE
Confidence 11011111 1111144688999998888766554444344443
No 447
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=73.04 E-value=1e+02 Score=33.82 Aligned_cols=88 Identities=9% Similarity=0.112 Sum_probs=50.4
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGS 202 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t 202 (726)
+-...|||....|+ .|+|.....|||--+.....-.. +-.+.+++|.|| +-++.-+.. ..| +
T Consensus 189 iL~~~W~~~s~lI~-----sgGED~kfKvWD~~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-------t~R--~-- 251 (737)
T KOG1524|consen 189 VLSLSWSTQSNIIA-----SGGEDFRFKIWDAQGANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-------TAR--F-- 251 (737)
T ss_pred EEEeecCcccccee-----ecCCceeEEeecccCcccccCChhccceeeeeeccc-cceeeeeee-------eee--e--
Confidence 33456888887664 25667888999976433222111 336789999999 323222111 111 2
Q ss_pred CCceeEEeeecCCceEEEEEEcCCCcEEEEEEcC
Q 004866 203 TDEDALLLEESNENVYVNIRHTKDFHFVCVHTFS 236 (726)
Q Consensus 203 ~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~ 236 (726)
+.++......++||+||..+......
T Consensus 252 --------~~p~~GSifnlsWS~DGTQ~a~gt~~ 277 (737)
T KOG1524|consen 252 --------SSPRVGSIFNLSWSADGTQATCGTST 277 (737)
T ss_pred --------cCCCccceEEEEEcCCCceeeccccC
Confidence 22222222367899999998765544
No 448
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=72.86 E-value=34 Score=39.45 Aligned_cols=68 Identities=19% Similarity=0.142 Sum_probs=47.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
.+....||+||.+| |+ +|. .-.|.+|.++|++..-+.. ......+.||||+........| ++|.++..
T Consensus 253 ~V~~L~fS~~G~~L-lS---GG~-E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~D-----NqI~li~~ 321 (792)
T KOG1963|consen 253 EVNSLSFSSDGAYL-LS---GGR-EGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLED-----NQIHLIKA 321 (792)
T ss_pred ccceeEEecCCceE-ee---ccc-ceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecC-----ceEEEEec
Confidence 57778999999887 33 233 3579999999998555554 3356789999999866665432 35555554
No 449
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=72.39 E-value=1.5e+02 Score=32.12 Aligned_cols=114 Identities=7% Similarity=-0.049 Sum_probs=70.3
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+-...|+|+++.++.+.+. ...+.+||+.++.. +... .+.+...+|+|-...|+++-. ....|..+|
T Consensus 112 pv~~~~f~~~d~t~l~s~sD----d~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivvtGs----YDg~vrl~D 182 (487)
T KOG0310|consen 112 PVHVTKFSPQDNTMLVSGSD----DKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVVTGS----YDGKVRLWD 182 (487)
T ss_pred ceeEEEecccCCeEEEecCC----CceEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEEecC----CCceEEEEE
Confidence 34456799999988766432 23578899988875 3222 445677899999999999842 334788888
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCC
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPF 251 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~ 251 (726)
+.+......-+. .+.+ .-++-.-|.|..|+-. +.+.+-++|+.++.
T Consensus 183 tR~~~~~v~eln-hg~p-Ve~vl~lpsgs~iasA----gGn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 183 TRSLTSRVVELN-HGCP-VESVLALPSGSLIASA----GGNSVKVWDLTTGG 228 (487)
T ss_pred eccCCceeEEec-CCCc-eeeEEEcCCCCEEEEc----CCCeEEEEEecCCc
Confidence 766532222221 1111 1234456777766522 23568888987643
No 450
>KOG1520 consensus Predicted alkaloid synthase/Surface mucin Hemomucin [General function prediction only]
Probab=72.09 E-value=25 Score=36.87 Aligned_cols=110 Identities=11% Similarity=0.070 Sum_probs=59.4
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--cc----ccceeEEecCCCEEEEEEecCCC----------
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AV----RVSNIAWAKDGQALIYVVTDQNK---------- 190 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~----~~~~~~WspDg~~l~y~~~~~~~---------- 190 (726)
+++...|.-| |+.|. ..-|++++.++|....++. .+ -..++.-.++ .-||||......
T Consensus 120 l~f~~~ggdL-~VaDA----YlGL~~V~p~g~~a~~l~~~~~G~~~kf~N~ldI~~~-g~vyFTDSSsk~~~rd~~~a~l 193 (376)
T KOG1520|consen 120 IRFDKKGGDL-YVADA----YLGLLKVGPEGGLAELLADEAEGKPFKFLNDLDIDPE-GVVYFTDSSSKYDRRDFVFAAL 193 (376)
T ss_pred EEeccCCCeE-EEEec----ceeeEEECCCCCcceeccccccCeeeeecCceeEcCC-CeEEEeccccccchhheEEeee
Confidence 4566666544 22332 3448888888887555432 11 1244566664 457777443221
Q ss_pred ---CCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCc-eEEEEE
Q 004866 191 ---RPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTS-SKVFLI 245 (726)
Q Consensus 191 ---~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~-~~l~~~ 245 (726)
...+++++|..+....+++ .+-.|--+++.|||+.++++....... .++|+-
T Consensus 194 ~g~~~GRl~~YD~~tK~~~VLl---d~L~F~NGlaLS~d~sfvl~~Et~~~ri~rywi~ 249 (376)
T KOG1520|consen 194 EGDPTGRLFRYDPSTKVTKVLL---DGLYFPNGLALSPDGSFVLVAETTTARIKRYWIK 249 (376)
T ss_pred cCCCccceEEecCcccchhhhh---hcccccccccCCCCCCEEEEEeeccceeeeeEec
Confidence 1235667776554333332 112233468999999999887654322 344443
No 451
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=71.22 E-value=17 Score=36.87 Aligned_cols=51 Identities=20% Similarity=0.373 Sum_probs=29.7
Q ss_pred HHHHHH-HHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCC-ceeEEEEeC
Q 004866 554 IKDFIS-CARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPD-LFRAVVLEV 605 (726)
Q Consensus 554 ~~D~~~-~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~-~f~a~v~~~ 605 (726)
+.+.++ +++.|.+.+... +-+-++|+|.||.+.=+++.+.|+ -.+-.|..+
T Consensus 61 v~~Qv~~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlg 113 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLG 113 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES
T ss_pred HHHHHHHHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEec
Confidence 344443 334444333222 578999999999998888877764 355556544
No 452
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=70.83 E-value=39 Score=35.04 Aligned_cols=91 Identities=13% Similarity=0.140 Sum_probs=54.0
Q ss_pred eCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCce
Q 004866 129 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDED 206 (726)
Q Consensus 129 ~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~ 206 (726)
-|-||..+..+.++++ +|.+||+.+|..+.... ...+.+++++|-|++|+=...|. .|..+++...+.-
T Consensus 299 ~~~~~~~~l~s~SrDk----tIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk-----tlrvwdl~~~~cm 369 (406)
T KOG0295|consen 299 GSTNGGQVLGSGSRDK----TIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDK-----TLRVWDLKNLQCM 369 (406)
T ss_pred CCCCCccEEEeecccc----eEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCC-----cEEEEEeccceee
Confidence 3444445555544433 69999999997654322 45678899999999987664332 4666677665421
Q ss_pred eEEeeecCCceEEEEEEcCCCcEE
Q 004866 207 ALLLEESNENVYVNIRHTKDFHFV 230 (726)
Q Consensus 207 ~lv~~~~d~~~~~~~~~s~Dg~~l 230 (726)
..+ +....|...+.+..+--++
T Consensus 370 k~~--~ah~hfvt~lDfh~~~p~V 391 (406)
T KOG0295|consen 370 KTL--EAHEHFVTSLDFHKTAPYV 391 (406)
T ss_pred ecc--CCCcceeEEEecCCCCceE
Confidence 111 2334455555665554443
No 453
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=70.76 E-value=1.2e+02 Score=30.57 Aligned_cols=159 Identities=13% Similarity=0.079 Sum_probs=74.6
Q ss_pred eeceeeC--CCCC-EEEEEEeCC-CCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEE
Q 004866 124 EELSEVS--PDHK-FLAYTMYDK-DNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIY 196 (726)
Q Consensus 124 ~~~~~~S--PDG~-~la~~~~~~-g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~ 196 (726)
+-+..|| ||-+ +||.++-.. -+...+|.-.|.++|+.+.... .--..-+.|.||.+..+=-........-+||
T Consensus 47 lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~e~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLATs~D~LRlW 126 (364)
T KOG0290|consen 47 LYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSGELVEDANFDHPYPVTKLMWIPDSKGVYPDLLATSSDFLRLW 126 (364)
T ss_pred eeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCCceeccCCCCCCCCccceEecCCccccCcchhhcccCeEEEE
Confidence 3344566 4444 477764322 2235567777788888776543 2234568899998765431111112233555
Q ss_pred EEEcCCCC--ceeEEeeecCCceE---EEEEEcCCCcEEEEEEcCCCceEEEEEeCC-CCCCCeEEeeccCCceEEeeee
Q 004866 197 CSIIGSTD--EDALLLEESNENVY---VNIRHTKDFHFVCVHTFSTTSSKVFLINAA-DPFSGLTLIWECEGLAHCIVEH 270 (726)
Q Consensus 197 ~~~l~t~~--~~~lv~~~~d~~~~---~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~-~~~~~~~~l~~~~~~~~~~~~~ 270 (726)
+..-...+ ...++....+..|. .++.|..=.-.++.+++-+++..||-+... .+..+.+.+....+.....+..
T Consensus 127 ri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~ 206 (364)
T KOG0290|consen 127 RIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLK 206 (364)
T ss_pred eccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEecc
Confidence 54432222 11112111222221 244555444445556666666777755543 1111233444333333333444
Q ss_pred cCCEEEEEecCc
Q 004866 271 HEGFLYLFTDAA 282 (726)
Q Consensus 271 ~g~~l~~~t~~~ 282 (726)
.+..++....++
T Consensus 207 ~s~~~FASvgaD 218 (364)
T KOG0290|consen 207 GSRDVFASVGAD 218 (364)
T ss_pred CccceEEEecCC
Confidence 444455544444
No 454
>PLN00413 triacylglycerol lipase
Probab=70.34 E-value=6.7 Score=42.55 Aligned_cols=38 Identities=16% Similarity=0.170 Sum_probs=28.4
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 553 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
.+..+...++.++++. ...+|.++|||+||.||..++.
T Consensus 266 ayy~i~~~Lk~ll~~~--p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 266 AYYTILRHLKEIFDQN--PTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred hHHHHHHHHHHHHHHC--CCCeEEEEecCHHHHHHHHHHH
Confidence 4556667777776542 2358999999999999988775
No 455
>PHA03098 kelch-like protein; Provisional
Probab=69.89 E-value=2e+02 Score=32.53 Aligned_cols=191 Identities=5% Similarity=-0.090 Sum_probs=88.2
Q ss_pred EEEEEEECCCCceecccc-c-cc-cceeEEecCCCEEEEEEe-cCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEE
Q 004866 148 FTLSVRNLNSGALCSKPQ-A-VR-VSNIAWAKDGQALIYVVT-DQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRH 223 (726)
Q Consensus 148 ~~l~v~dl~tg~~~~~~~-~-~~-~~~~~WspDg~~l~y~~~-~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~ 223 (726)
.+++.+|+.+++...... . .. ....+. -++ .||...- +.......+++++..+..-.. +-.-+.++..... .
T Consensus 311 ~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~-~~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~lp~~r~~~~~-~ 386 (534)
T PHA03098 311 NSVVSYDTKTKSWNKVPELIYPRKNPGVTV-FNN-RIYVIGGIYNSISLNTVESWKPGESKWRE-EPPLIFPRYNPCV-V 386 (534)
T ss_pred ccEEEEeCCCCeeeECCCCCcccccceEEE-ECC-EEEEEeCCCCCEecceEEEEcCCCCceee-CCCcCcCCccceE-E
Confidence 368999999988766543 1 11 122222 244 4555432 211223467888877654111 1111112222122 2
Q ss_pred cCCCcEEEEEEcCC---CceEEEEEeCCCCCCCeEEeeccCCce-EEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 224 TKDFHFVCVHTFST---TSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 224 s~Dg~~l~~~~~~~---~~~~l~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
.-+++..++..... ..+.++.+|..+ .++..+.+..... .......++.+|+..-.........-..++.+|..
T Consensus 387 ~~~~~iYv~GG~~~~~~~~~~v~~yd~~t--~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 464 (534)
T PHA03098 387 NVNNLIYVIGGISKNDELLKTVECFSLNT--NKWSKGSPLPISHYGGCAIYHDGKIYVIGGISYIDNIKVYNIVESYNPV 464 (534)
T ss_pred EECCEEEEECCcCCCCcccceEEEEeCCC--CeeeecCCCCccccCceEEEECCEEEEECCccCCCCCcccceEEEecCC
Confidence 23454333322111 136789999877 4555544322111 11122246677777532211100001236777665
Q ss_pred CCCCCCCceEEeecCCCceEEEEeeeCCEEEEEEEeCC---eeEEEEEecCC
Q 004866 300 ASFPSRTWESVFIDDQGLVVEDVDFCKTHMALILREGR---TYRLCSVSLPL 348 (726)
Q Consensus 300 ~~~~~~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g---~~~l~~~~l~~ 348 (726)
..+|..+-+......-......++.|++....++ ...+..+|+.+
T Consensus 465 ----~~~W~~~~~~~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 512 (534)
T PHA03098 465 ----TNKWTELSSLNFPRINASLCIFNNKIYVVGGDKYEYYINEIEVYDDKT 512 (534)
T ss_pred ----CCceeeCCCCCcccccceEEEECCEEEEEcCCcCCcccceeEEEeCCC
Confidence 5789865321111111233344677877754432 24677777654
No 456
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=69.84 E-value=1.9e+02 Score=32.23 Aligned_cols=197 Identities=15% Similarity=0.057 Sum_probs=0.0
Q ss_pred eceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCC-------------
Q 004866 125 ELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQN------------- 189 (726)
Q Consensus 125 ~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~------------- 189 (726)
..+.+||||+||.-+ |.-..+|.++|++.=...-.-- .+.+.-..-|.|=..+++...|+.
T Consensus 55 t~ik~s~DGqY~lAt----G~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~hy~~ 130 (703)
T KOG2321|consen 55 TRIKVSPDGQYLLAT----GTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGRHYRT 130 (703)
T ss_pred ceeEecCCCcEEEEe----cccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCeeeee
Q ss_pred ---------------------CCCceEEEEEcCCCCceeEEeeecCCceEE-----------------------------
Q 004866 190 ---------------------KRPYQIYCSIIGSTDEDALLLEESNENVYV----------------------------- 219 (726)
Q Consensus 190 ---------------------~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~----------------------------- 219 (726)
.....||+.+|..+.--...-.....-..+
T Consensus 131 RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv 210 (703)
T KOG2321|consen 131 RIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRV 210 (703)
T ss_pred ecCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhh
Q ss_pred ----------------------EEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEE----eeeecCC
Q 004866 220 ----------------------NIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHC----IVEHHEG 273 (726)
Q Consensus 220 ----------------------~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~----~~~~~g~ 273 (726)
.+.++.||-.+.+.+..+ .++++||.+ ..+..+.......-. +...++.
T Consensus 211 ~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G---~v~iyDLRa--~~pl~~kdh~~e~pi~~l~~~~~~~q 285 (703)
T KOG2321|consen 211 GTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTG---SVLIYDLRA--SKPLLVKDHGYELPIKKLDWQDTDQQ 285 (703)
T ss_pred eeeecccccCCCccccccCcceEEEecCCceeEEeeccCC---cEEEEEccc--CCceeecccCCccceeeecccccCCC
Q ss_pred EEEEEecCcccCCCCCCeEEEEeeCCCCCCCCCceEEeecCCCceEEEEeee-CCEEEEEEEeCCeeEEEEEe
Q 004866 274 FLYLFTDAAKEGQEADNHYLLRCPVDASFPSRTWESVFIDDQGLVVEDVDFC-KTHMALILREGRTYRLCSVS 345 (726)
Q Consensus 274 ~l~~~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~~ 345 (726)
.-++..+... .+||.-... +....-++...+.++..+ +..++++.++++.-..+.+.
T Consensus 286 ~~v~S~Dk~~-------~kiWd~~~G--------k~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~yyiP 343 (703)
T KOG2321|consen 286 NKVVSMDKRI-------LKIWDECTG--------KPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTYYIP 343 (703)
T ss_pred ceEEecchHH-------hhhcccccC--------CceeeccccCCcCceeeecCCceEEEecCCCcceeEEcc
No 457
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=69.80 E-value=8.9 Score=41.29 Aligned_cols=77 Identities=21% Similarity=0.318 Sum_probs=45.4
Q ss_pred cchHHHHHHHHCCcEEEEEccCCCC--CCCCcccccccccCCCCcHHHHHHHHHHHHHcC--CCCCCcEEEEEecccHHH
Q 004866 511 RWRSELKSLLDRGWVVAFADVRGGG--GGGKKWHHDGRRTKKLNSIKDFISCARFLIEKE--IVKEHKLAGWGYSAGGLL 586 (726)
Q Consensus 511 ~~~~~~~~l~~~G~~v~~~d~RG~g--~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~--~~d~~ri~i~G~S~GG~l 586 (726)
.|...++.|+.-||. ||-. +.+-.|+.+- ...+..+....-++-+++.- .-..++|.|++|||||.+
T Consensus 125 ~w~~~i~~lv~~GYe------~~~~l~ga~YDwRls~---~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~ 195 (473)
T KOG2369|consen 125 YWHELIENLVGIGYE------RGKTLFGAPYDWRLSY---HNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLY 195 (473)
T ss_pred HHHHHHHHHHhhCcc------cCceeeccccchhhcc---CChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHH
Confidence 356677888888886 2222 1222343311 11223344444444444321 123389999999999999
Q ss_pred HHHHHHcCCC
Q 004866 587 VAAAINCCPD 596 (726)
Q Consensus 587 ~~~~~~~~p~ 596 (726)
+..-+..+++
T Consensus 196 ~lyFl~w~~~ 205 (473)
T KOG2369|consen 196 VLYFLKWVEA 205 (473)
T ss_pred HHHHHhcccc
Confidence 9999988877
No 458
>PLN02753 triacylglycerol lipase
Probab=69.59 E-value=6.1 Score=43.39 Aligned_cols=41 Identities=17% Similarity=0.201 Sum_probs=30.4
Q ss_pred CcHHHHHHHHHHHHHcCCC---CCCcEEEEEecccHHHHHHHHH
Q 004866 552 NSIKDFISCARFLIEKEIV---KEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~---d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
...+.+.+.++.|+++--- ..-+|.|+|||+||.||..++.
T Consensus 288 S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 288 SAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred hHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3466777888888764211 1359999999999999988774
No 459
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=69.37 E-value=5.9 Score=43.91 Aligned_cols=67 Identities=6% Similarity=-0.176 Sum_probs=47.0
Q ss_pred CCeEEEEecCCCCcChHHHHHHHHHHHhcCCCC---CCCcEEE--EcCCCCCCCc-hhhHHHHHHHHHHHHHH
Q 004866 656 YPAVLVTSSFNTRFGVWEAAKWVARVRESTIYD---PKRPILL--NLTTDIVEEN-RYLQCKESALETAFLIK 722 (726)
Q Consensus 656 ~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~---~~~~~~~--~~~~gH~~~~-~~~~~~~~~~~~~fl~~ 722 (726)
..+|+.||-.|..||+..+..+++++.+.--.. -..-+.| .|+.+|+... -....+.+....+|.++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 358899999999999999999999998763210 0122322 7899998654 34455666666788764
No 460
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=69.28 E-value=1.2e+02 Score=29.66 Aligned_cols=130 Identities=12% Similarity=-0.004 Sum_probs=62.2
Q ss_pred EEEEEECCCCceecccc-ccccceeE--EecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcC
Q 004866 149 TLSVRNLNSGALCSKPQ-AVRVSNIA--WAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTK 225 (726)
Q Consensus 149 ~l~v~dl~tg~~~~~~~-~~~~~~~~--WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~ 225 (726)
+|..+|+.+|+.+-... ........ -.+++..+|... ....|+.+++.+++. .-.+.... .+...+ ..
T Consensus 4 ~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~l~~~d~~tG~~-~W~~~~~~-~~~~~~--~~ 74 (238)
T PF13360_consen 4 TLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVAS-----GDGNLYALDAKTGKV-LWRFDLPG-PISGAP--VV 74 (238)
T ss_dssp EEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEE-----TTSEEEEEETTTSEE-EEEEECSS-CGGSGE--EE
T ss_pred EEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEc-----CCCEEEEEECCCCCE-EEEeeccc-ccccee--ee
Confidence 46777777776543221 11122222 334667777662 234899999877741 11122111 111112 22
Q ss_pred CCcEEEEEEcCCCceEEEEEeCCCCCCCeE-EeeccC-Cce--EEeeeecCCEEEEEecCcccCCCCCCeEEEEeeCC
Q 004866 226 DFHFVCVHTFSTTSSKVFLINAADPFSGLT-LIWECE-GLA--HCIVEHHEGFLYLFTDAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 226 Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~-~l~~~~-~~~--~~~~~~~g~~l~~~t~~~~~~~~~~~~~l~~~~~~ 299 (726)
++..|++.... ..|+.+|+.++...++ ...... ... ......+++.+++.... ..|+.++..
T Consensus 75 ~~~~v~v~~~~---~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g~l~~~d~~ 140 (238)
T PF13360_consen 75 DGGRVYVGTSD---GSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSS---------GKLVALDPK 140 (238)
T ss_dssp ETTEEEEEETT---SEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETC---------SEEEEEETT
T ss_pred cccccccccce---eeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEecc---------CcEEEEecC
Confidence 34445554422 3799999888543333 121111 111 11222347777776642 236777764
No 461
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=69.18 E-value=33 Score=38.59 Aligned_cols=62 Identities=11% Similarity=0.181 Sum_probs=38.4
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcE-----------EE--------EEEEECCCCceecccc---ccccceeEEecCCCE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDY-----------FT--------LSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQA 180 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~-----------~~--------l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~ 180 (726)
+-.++.|+|+|+. .+..|..+... +. +...+..+|+..+... ...+.++.|+||+++
T Consensus 437 sPDNL~~d~~G~L-wI~eD~~~~~~~l~g~t~~G~~~~~~~~~G~~~~~~~~~~g~~~rf~~~P~gaE~tG~~fspDg~t 515 (524)
T PF05787_consen 437 SPDNLAFDPDGNL-WIQEDGGGSNNNLPGVTPDGEVYDFARNDGNNVWAYDPDTGELKRFLVGPNGAEITGPCFSPDGRT 515 (524)
T ss_pred CCCceEECCCCCE-EEEeCCCCCCcccccccccCceeeeeecccceeeeccccccceeeeccCCCCcccccceECCCCCE
Confidence 4455689999984 44445444321 11 3445566666555332 345788999999999
Q ss_pred EEEEE
Q 004866 181 LIYVV 185 (726)
Q Consensus 181 l~y~~ 185 (726)
||+.-
T Consensus 516 lFvni 520 (524)
T PF05787_consen 516 LFVNI 520 (524)
T ss_pred EEEEE
Confidence 98753
No 462
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=69.16 E-value=14 Score=43.81 Aligned_cols=139 Identities=10% Similarity=0.056 Sum_probs=77.1
Q ss_pred CCCcEEEeecccccccCCce------EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-cccc---cccce
Q 004866 102 KKIEQKLLDYNQEAERFGGY------AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQA---VRVSN 171 (726)
Q Consensus 102 ~~~~~~lld~n~~~~~~~~~------~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~~---~~~~~ 171 (726)
+.+|-.|.|.|.+...+. + -.+..++|.-.-.+|.-+....| ...|||+...+.+. +... ..++.
T Consensus 137 ~~geI~iWDlnn~~tP~~-~~~~~~~~eI~~lsWNrkvqhILAS~s~sg----~~~iWDlr~~~pii~ls~~~~~~~~S~ 211 (1049)
T KOG0307|consen 137 DDGEILIWDLNKPETPFT-PGSQAPPSEIKCLSWNRKVSHILASGSPSG----RAVIWDLRKKKPIIKLSDTPGRMHCSV 211 (1049)
T ss_pred CCCcEEEeccCCcCCCCC-CCCCCCcccceEeccchhhhHHhhccCCCC----CceeccccCCCcccccccCCCccceee
Confidence 345566778887654432 1 02333455554455444433333 37899998875443 2222 24678
Q ss_pred eEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 172 IAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 172 ~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
++|.||+.+-+.+..++... .-|-.+|+.-......+++. ..+-.+.+.|++.+..+++++.. ++++..++..+
T Consensus 212 l~WhP~~aTql~~As~dd~~-PviqlWDlR~assP~k~~~~-H~~GilslsWc~~D~~lllSsgk--D~~ii~wN~~t 285 (1049)
T KOG0307|consen 212 LAWHPDHATQLLVASGDDSA-PVIQLWDLRFASSPLKILEG-HQRGILSLSWCPQDPRLLLSSGK--DNRIICWNPNT 285 (1049)
T ss_pred eeeCCCCceeeeeecCCCCC-ceeEeecccccCCchhhhcc-cccceeeeccCCCCchhhhcccC--CCCeeEecCCC
Confidence 99999997766665554332 23445555332222223322 22224678899888777766653 35677777766
No 463
>PLN02761 lipase class 3 family protein
Probab=68.28 E-value=7 Score=42.88 Aligned_cols=41 Identities=15% Similarity=0.067 Sum_probs=30.3
Q ss_pred CcHHHHHHHHHHHHHcCC---CCC-CcEEEEEecccHHHHHHHHH
Q 004866 552 NSIKDFISCARFLIEKEI---VKE-HKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~---~d~-~ri~i~G~S~GG~l~~~~~~ 592 (726)
...+++.+.++.|+++-. -++ -+|.|.|||+||.|+..++.
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 345677888888876421 233 48999999999999988774
No 464
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=67.87 E-value=71 Score=33.60 Aligned_cols=104 Identities=14% Similarity=0.114 Sum_probs=52.9
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCce-eccc-----c---ccccceeEEecC---CCEEEEEEec--C--C
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGAL-CSKP-----Q---AVRVSNIAWAKD---GQALIYVVTD--Q--N 189 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~-~~~~-----~---~~~~~~~~WspD---g~~l~y~~~~--~--~ 189 (726)
.++|.|||+. |+..+.| .|++++ ..|.. ..+. . .....++++.|+ ..+||..... . .
T Consensus 6 ~~a~~pdG~l--~v~e~~G----~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 6 SMAFLPDGRL--LVAERSG----RIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp EEEEETTSCE--EEEETTT----EEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred EEEEeCCCcE--EEEeCCc----eEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 3578999875 3445666 488888 34433 1111 0 124466788885 3455543321 1 1
Q ss_pred CCCceEEEEEcCCC--C---ceeEEeeecC----CceEEEEEEcCCCcEEEEEEcCC
Q 004866 190 KRPYQIYCSIIGST--D---EDALLLEESN----ENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 190 ~~~~~l~~~~l~t~--~---~~~lv~~~~d----~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
.....|.++.+..+ . ...++-..+. ...-..+.+.||| +|+++..+.
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG-~LYvs~G~~ 134 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDG-KLYVSVGDG 134 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTS-EEEEEEB-T
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCC-cEEEEeCCC
Confidence 22346777777544 1 1222222222 2233458899999 788877544
No 465
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.33 E-value=1.3e+02 Score=31.80 Aligned_cols=218 Identities=14% Similarity=0.089 Sum_probs=107.0
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
..|+|+.+..+ + +.+..-......+.++||.++..-.+-.-- .-..........+....+..|++.-..|+
T Consensus 38 ~k~Iv~~~gWa-g-~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~-------~~~~s~~~~sl~~~~~~l~~L~~~~~~~~ 108 (350)
T KOG2521|consen 38 EKPIVVLLGWA-G-AIDRNLMKYSKIYQDKGYIVVRITAPCPSV-------FLSASRRILSLSLASTRLSELLSDYNSDP 108 (350)
T ss_pred cccEEEEeeec-c-ccchhHHHHHHHHhcCCceEEEecCccccc-------ccccccccchhhHHHHHHHHHhhhccCCc
Confidence 34776665432 2 222333445566777899988776553321 11111223345555556666666545899
Q ss_pred CcEEEEEecccHHHHHHHH---HcCC-----CceeEEEEe-CCcc-----cccccccCCCCC-CChhhhcc---------
Q 004866 573 HKLAGWGYSAGGLLVAAAI---NCCP-----DLFRAVVLE-VPFL-----DATNTLLYPILP-LIAADYEE--------- 628 (726)
Q Consensus 573 ~ri~i~G~S~GG~l~~~~~---~~~p-----~~f~a~v~~-~p~~-----d~~~~~~~~~~~-~~~~~~~~--------- 628 (726)
.+|...=.|+||.+.+... ...+ +++...+.. +|.. +... +.....| ....++.+
T Consensus 109 ~pi~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a-~~~~~~~~~~~~~~~~~~~~i~~~~ 187 (350)
T KOG2521|consen 109 CPIIFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWA-VSFSSPPDDYVARWARLNYHITLLT 187 (350)
T ss_pred CceEEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcce-eccccCchhhHHHHHhcCeEEEEEE
Confidence 9999999999997665544 2112 123322222 1211 1100 0000000 00000000
Q ss_pred -cCCCCChhHHHHHHhcCc----ccc----cccC--CCCCeEEEEecCCCCcChHHHHHHHHHHHhcCCCCCCCcEEE-E
Q 004866 629 -FGYPGDIDDFHAIRNYSP----YDN----IQKD--VLYPAVLVTSSFNTRFGVWEAAKWVARVRESTIYDPKRPILL-N 696 (726)
Q Consensus 629 -~g~~~~~~~~~~~~~~sp----~~~----i~~~--~~~P~lli~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~ 696 (726)
++.-.....+..+....+ ... .... ...+.+.+.+..|..+|..+-++|++..++.|+. ..-+ +
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~----v~s~~~ 263 (350)
T KOG2521|consen 188 MAGNEGGAYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVN----VKSVKF 263 (350)
T ss_pred eeecccchhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCce----EEEeec
Confidence 011000000000100000 000 0011 1456788889999999999999999999988842 2223 5
Q ss_pred cCCCCCCCchhhHHHHHHHHHHHHHHhh
Q 004866 697 LTTDIVEENRYLQCKESALETAFLIKMM 724 (726)
Q Consensus 697 ~~~gH~~~~~~~~~~~~~~~~~fl~~~l 724 (726)
.++-|....+..-..-.+...+|+....
T Consensus 264 ~ds~H~~h~r~~p~~y~~~~~~Fl~~~~ 291 (350)
T KOG2521|consen 264 KDSEHVAHFRSFPKTYLKKCSEFLRSVI 291 (350)
T ss_pred cCccceeeeccCcHHHHHHHHHHHHhcc
Confidence 6666754333333444455668887653
No 466
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=67.18 E-value=82 Score=31.71 Aligned_cols=34 Identities=29% Similarity=0.276 Sum_probs=25.3
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS 162 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~ 162 (726)
-..++||||+..|||+.+ .| +|+|.|+.+.+...
T Consensus 46 WRkl~WSpD~tlLa~a~S-~G----~i~vfdl~g~~lf~ 79 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAES-TG----TIRVFDLMGSELFV 79 (282)
T ss_pred heEEEECCCCcEEEEEcC-CC----eEEEEecccceeEE
Confidence 344679999999999854 45 48899998765443
No 467
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=66.37 E-value=1.1e+02 Score=33.77 Aligned_cols=106 Identities=12% Similarity=-0.016 Sum_probs=55.8
Q ss_pred ceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc-c--------ccccceeEEecCC------CEEEEEEecC--
Q 004866 126 LSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-Q--------AVRVSNIAWAKDG------QALIYVVTDQ-- 188 (726)
Q Consensus 126 ~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~-~--------~~~~~~~~WspDg------~~l~y~~~~~-- 188 (726)
.++|.|||+.+ ++....| .|++++..++....+. . .....+++++||= ++||++-...
T Consensus 34 ~maflPDG~ll-VtER~~G----~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~~~~n~~lYvsyt~~~~ 108 (454)
T TIGR03606 34 ALLWGPDNQLW-VTERATG----KILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQEKGNPYVYISYTYKNG 108 (454)
T ss_pred EEEEcCCCeEE-EEEecCC----EEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccccCCCcEEEEEEeccCC
Confidence 45799999643 4432235 3788887666432211 0 1234567888873 3555442221
Q ss_pred CC---CCceEEEEEcCCC--C--ceeEEee-ecC--CceEEEEEEcCCCcEEEEEEcCC
Q 004866 189 NK---RPYQIYCSIIGST--D--EDALLLE-ESN--ENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 189 ~~---~~~~l~~~~l~t~--~--~~~lv~~-~~d--~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
.. ....|.+..+... . ....++. .+. .++--.+.+.|||+ |+++..+.
T Consensus 109 ~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~GgrI~FgPDG~-LYVs~GD~ 166 (454)
T TIGR03606 109 DKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHNGGRLVFGPDGK-IYYTIGEQ 166 (454)
T ss_pred CCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcCCceEEECCCCc-EEEEECCC
Confidence 11 2357888877421 1 1223332 211 12234578899996 77766544
No 468
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=66.19 E-value=45 Score=36.34 Aligned_cols=120 Identities=12% Similarity=0.076 Sum_probs=69.8
Q ss_pred CCCcEEEEEEEEcCCCCCCCCccEEEEEcCCCCCCCCccchHHHHHHHHCCcE-EEEEccCCCCCCCCcccccccccCCC
Q 004866 473 HDGISVPLTIIYSPKYKKENQNPGLLHGHGAYGELLDKRWRSELKSLLDRGWV-VAFADVRGGGGGGKKWHHDGRRTKKL 551 (726)
Q Consensus 473 ~dG~~i~~~l~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~-v~~~d~RG~g~~g~~~~~~~~~~~~~ 551 (726)
..+.++-. .+.|-++ |.|+.||+-|- -. ...|.... .|-+.|.- .++-|.|-.|| +|+-. .
T Consensus 273 ~~reEi~y-YFnPGD~----KPPL~VYFSGy-R~--aEGFEgy~-MMk~Lg~PfLL~~DpRleGG---aFYlG-s----- 334 (511)
T TIGR03712 273 SKRQEFIY-YFNPGDF----KPPLNVYFSGY-RP--AEGFEGYF-MMKRLGAPFLLIGDPRLEGG---AFYLG-S----- 334 (511)
T ss_pred CCCCeeEE-ecCCcCC----CCCeEEeeccC-cc--cCcchhHH-HHHhcCCCeEEeeccccccc---eeeeC-c-----
Confidence 34666654 4566654 46999999872 21 12333221 12223443 56778997665 33321 1
Q ss_pred CcH-HHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHcCCCceeEEEEeCCcccccc
Q 004866 552 NSI-KDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINCCPDLFRAVVLEVPFLDATN 612 (726)
Q Consensus 552 ~~~-~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~~p~~f~a~v~~~p~~d~~~ 612 (726)
..+ +-++..++.-.+.--.+++.+.+.|-|||-+-|+..++... -+|+|..-|++++-+
T Consensus 335 ~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKPL~NLGt 394 (511)
T TIGR03712 335 DEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKPLVNLGT 394 (511)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCC--CceEEEcCcccchhh
Confidence 111 12223333222222247789999999999999999887642 258888889998754
No 469
>PLN02310 triacylglycerol lipase
Probab=65.80 E-value=8.5 Score=41.11 Aligned_cols=40 Identities=20% Similarity=0.116 Sum_probs=28.6
Q ss_pred cHHHHHHHHHHHHHcCC-CC-CCcEEEEEecccHHHHHHHHH
Q 004866 553 SIKDFISCARFLIEKEI-VK-EHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~-~d-~~ri~i~G~S~GG~l~~~~~~ 592 (726)
..+.+.+.++.|++.-. .+ .-+|.|+|||+||.||..++.
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 44666777777776311 12 248999999999999988774
No 470
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=65.35 E-value=2.1e+02 Score=31.08 Aligned_cols=112 Identities=13% Similarity=0.078 Sum_probs=68.5
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcC
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIG 201 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~ 201 (726)
+.+..|-.||+.+|.. |..| .+.|+|..+...+.... ...+....|+|++..++.+..|+. .+-.+++.
T Consensus 71 v~s~~fR~DG~LlaaG-D~sG----~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~----v~k~~d~s 141 (487)
T KOG0310|consen 71 VYSVDFRSDGRLLAAG-DESG----HVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDK----VVKYWDLS 141 (487)
T ss_pred eeEEEeecCCeEEEcc-CCcC----cEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCc----eEEEEEcC
Confidence 4456788999999876 5555 58899965532332211 223456789999998888765532 34455666
Q ss_pred CCCceeEEeeecCCceEE-EEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 202 STDEDALLLEESNENVYV-NIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 202 t~~~~~lv~~~~d~~~~~-~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
+.. + .++..+...|+ ..+++|-..+|+++-.-+.. |.++|+..
T Consensus 142 ~a~--v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~--vrl~DtR~ 185 (487)
T KOG0310|consen 142 TAY--V-QAELSGHTDYVRCGDISPANDHIVVTGSYDGK--VRLWDTRS 185 (487)
T ss_pred CcE--E-EEEecCCcceeEeeccccCCCeEEEecCCCce--EEEEEecc
Confidence 543 2 33333333343 46789988888887665544 45555544
No 471
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=65.33 E-value=1.7e+02 Score=30.03 Aligned_cols=135 Identities=7% Similarity=-0.045 Sum_probs=69.0
Q ss_pred CCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCC--EEEEEEecCCCCCceEEEEEcCCCCc
Q 004866 130 SPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQ--ALIYVVTDQNKRPYQIYCSIIGSTDE 205 (726)
Q Consensus 130 SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~--~l~y~~~~~~~~~~~l~~~~l~t~~~ 205 (726)
.=+|.++|-+. ..-+|+|+|+.+........ .+.+..+.|.++-. +|+-. .+ ..+|..++.+.-.
T Consensus 50 AVs~~~~aSGs-----sDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~-sd----DG~i~iw~~~~W~- 118 (362)
T KOG0294|consen 50 AVSGPYVASGS-----SDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSG-SD----DGHIIIWRVGSWE- 118 (362)
T ss_pred EecceeEeccC-----CCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeee-cC----CCcEEEEEcCCeE-
Confidence 34566665432 12369999998765443221 34566677777754 44332 22 2356666665431
Q ss_pred eeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEec
Q 004866 206 DALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTD 280 (726)
Q Consensus 206 ~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~ 280 (726)
-.-.+...... ..+++..|.||. +++...+ ..+.++||-.+..... +.-+.......|++.|++|++...
T Consensus 119 ~~~slK~H~~~-Vt~lsiHPS~KL-ALsVg~D--~~lr~WNLV~Gr~a~v-~~L~~~at~v~w~~~Gd~F~v~~~ 188 (362)
T KOG0294|consen 119 LLKSLKAHKGQ-VTDLSIHPSGKL-ALSVGGD--QVLRTWNLVRGRVAFV-LNLKNKATLVSWSPQGDHFVVSGR 188 (362)
T ss_pred Eeeeecccccc-cceeEecCCCce-EEEEcCC--ceeeeehhhcCcccee-eccCCcceeeEEcCCCCEEEEEec
Confidence 00011111122 345778999984 4554432 3466677766433221 111122223455677887776654
No 472
>PRK13614 lipoprotein LpqB; Provisional
Probab=65.10 E-value=39 Score=38.26 Aligned_cols=79 Identities=8% Similarity=-0.034 Sum_probs=48.6
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEE-ECCCCceecccc------ccccceeEEecCCCEEEEEEecCCCCCceE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVR-NLNSGALCSKPQ------AVRVSNIAWAKDGQALIYVVTDQNKRPYQI 195 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~-dl~tg~~~~~~~------~~~~~~~~WspDg~~l~y~~~~~~~~~~~l 195 (726)
.+..+++|+||-++|.++..+|..+-.|-.+ .-..|+++.++. .....+++|..|++ |+..+... ....++
T Consensus 435 ~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~G~P~~L~~~~~~~~~~~~~sl~W~~~~s-l~V~~~~~-~~~~~~ 512 (573)
T PRK13614 435 TVKELRVSREGVRALVISEQNGKSRVQVAGIVRNEDGTPRELTAPITLAADSDADTGAWVGDST-VVVTKASA-TSNVVP 512 (573)
T ss_pred eeEEEEECCCccEEEEEEEeCCccEEEEEEEEeCCCCCeEEccCceecccCCCcceeEEcCCCE-EEEEeccC-CCcceE
Confidence 4788999999999999986666443333222 234566444432 12456789998876 55544322 233467
Q ss_pred EEEEcCCC
Q 004866 196 YCSIIGST 203 (726)
Q Consensus 196 ~~~~l~t~ 203 (726)
+++.++.+
T Consensus 513 ~~v~v~~g 520 (573)
T PRK13614 513 ELLSVDAG 520 (573)
T ss_pred EEEEeCCC
Confidence 78887544
No 473
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=64.63 E-value=2.7e+02 Score=32.18 Aligned_cols=115 Identities=9% Similarity=0.029 Sum_probs=68.9
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEc
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSII 200 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l 200 (726)
++..+.|++-.-.|..+-..+| .|..+|+....-..... .+.+.++.|+|--...|++..+. .-|-++|+
T Consensus 135 s~~~ldfh~tep~iliSGSQDg----~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~ds----G~lqlWDl 206 (839)
T KOG0269|consen 135 SANKLDFHSTEPNILISGSQDG----TVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDS----GYLQLWDL 206 (839)
T ss_pred ceeeeeeccCCccEEEecCCCc----eEEEEeeecccccccccccchhhhceeeccCCCceEEEecCC----ceEEEeec
Confidence 4556678888888877755544 68999998877665543 34677899999665555554443 24666777
Q ss_pred CCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCC
Q 004866 201 GSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAAD 249 (726)
Q Consensus 201 ~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~ 249 (726)
..+..-..-+....+. ..-+.|+|++.||+-.. ++ ..+.++|..+
T Consensus 207 Rqp~r~~~k~~AH~Gp-V~c~nwhPnr~~lATGG-RD--K~vkiWd~t~ 251 (839)
T KOG0269|consen 207 RQPDRCEKKLTAHNGP-VLCLNWHPNREWLATGG-RD--KMVKIWDMTD 251 (839)
T ss_pred cCchhHHHHhhcccCc-eEEEeecCCCceeeecC-CC--ccEEEEeccC
Confidence 6553111111122222 23468999999886433 33 3344455544
No 474
>PLN02162 triacylglycerol lipase
Probab=64.59 E-value=10 Score=41.07 Aligned_cols=38 Identities=24% Similarity=0.122 Sum_probs=26.7
Q ss_pred cHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 553 SIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 553 ~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
.+..+...++.+.++. ...++.+.|||.||.+|..++.
T Consensus 260 ay~~I~~~L~~lL~k~--p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARN--KNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhC--CCceEEEEecChHHHHHHHHHH
Confidence 4555666666555442 2368999999999999987654
No 475
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=64.23 E-value=1.9e+02 Score=30.27 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=86.7
Q ss_pred ccccceeEEecCCCEEEEEEecCCC--CCceEEEEEcCCC--C------ceeEEeeecCCc-e------EEEEEEcCCCc
Q 004866 166 AVRVSNIAWAKDGQALIYVVTDQNK--RPYQIYCSIIGST--D------EDALLLEESNEN-V------YVNIRHTKDFH 228 (726)
Q Consensus 166 ~~~~~~~~WspDg~~l~y~~~~~~~--~~~~l~~~~l~t~--~------~~~lv~~~~d~~-~------~~~~~~s~Dg~ 228 (726)
.+..+++.|.|++..+ |.-.|+.. .+.++|..++... . .........+.. + .-++++.+||.
T Consensus 19 ~GGlSgl~~~~~~~~~-~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~ 97 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRF-YAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS 97 (326)
T ss_pred cCcEeeEEEeCCCCEE-EEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC
Confidence 5577889999655444 33345432 2345666665431 1 111111122211 1 12466667776
Q ss_pred EEEEEEcCC----CceEEEEEeCCCCCCCeEEeec-------------cCCceE-EeeeecCCEEEEEecCcc--cCC--
Q 004866 229 FVCVHTFST----TSSKVFLINAADPFSGLTLIWE-------------CEGLAH-CIVEHHEGFLYLFTDAAK--EGQ-- 286 (726)
Q Consensus 229 ~l~~~~~~~----~~~~l~~~d~~~~~~~~~~l~~-------------~~~~~~-~~~~~~g~~l~~~t~~~~--~~~-- 286 (726)
+++ +.... ....|+.++.++.......+.. ...+.+ ..++++|+.||.....+- +..
T Consensus 98 ~~i-s~E~~~~~~~~p~I~~~~~~G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~ 176 (326)
T PF13449_consen 98 FWI-SSEGGRTGGIPPRIRRFDLDGRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRA 176 (326)
T ss_pred EEE-EeCCccCCCCCCEEEEECCCCcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccc
Confidence 544 33222 1267899987642111111111 011222 356789998888876431 110
Q ss_pred ---CCCCeEEEEeeCCCCCCCCCceE-EeecC------CCceEEEEeee-CCEEEEEEEeC----C-eeEEEEEecC
Q 004866 287 ---EADNHYLLRCPVDASFPSRTWES-VFIDD------QGLVVEDVDFC-KTHMALILREG----R-TYRLCSVSLP 347 (726)
Q Consensus 287 ---~~~~~~l~~~~~~~~~~~~~~~~-v~~~~------~~~~l~~~~~~-~~~lv~~~~~~----g-~~~l~~~~l~ 347 (726)
.....+|+.++.. ... ..+.. +.+-+ ....+.++... ++.+++.+|.. + ..+|+.+++.
T Consensus 177 ~~~~~~~~ri~~~d~~-~~~-~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~l~ 251 (326)
T PF13449_consen 177 NPDNGSPLRILRYDPK-TPG-EPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVDLS 251 (326)
T ss_pred ccccCceEEEEEecCC-CCC-ccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEEcc
Confidence 0112577777765 322 11222 22222 34566666655 46688888872 2 3467777764
No 476
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=63.76 E-value=99 Score=31.64 Aligned_cols=97 Identities=11% Similarity=0.068 Sum_probs=55.1
Q ss_pred CCCEEEEEEeCCCCcEEEEEEEECCCCcee-cccc---ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCcee
Q 004866 132 DHKFLAYTMYDKDNDYFTLSVRNLNSGALC-SKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDA 207 (726)
Q Consensus 132 DG~~la~~~~~~g~e~~~l~v~dl~tg~~~-~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~ 207 (726)
+-..|||=....| +|.|+|+...+.- +..+ ...+.-++-+-+|..|+-.+. ...-|.+.+..++.. .
T Consensus 147 ~k~~LafPg~k~G----qvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaSt----kGTLIRIFdt~~g~~-l 217 (346)
T KOG2111|consen 147 NKSLLAFPGFKTG----QVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATAST----KGTLIRIFDTEDGTL-L 217 (346)
T ss_pred CceEEEcCCCccc----eEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEecc----CcEEEEEEEcCCCcE-e
Confidence 4445666443444 6889999876652 1111 335566788889987765432 223455566555431 1
Q ss_pred EEee-ecCCceEEEEEEcCCCcEEEEEEcCC
Q 004866 208 LLLE-ESNENVYVNIRHTKDFHFVCVHTFST 237 (726)
Q Consensus 208 lv~~-~~d~~~~~~~~~s~Dg~~l~~~~~~~ 237 (726)
.-+. ..+......+++|||+.+|++.+..+
T Consensus 218 ~E~RRG~d~A~iy~iaFSp~~s~LavsSdKg 248 (346)
T KOG2111|consen 218 QELRRGVDRADIYCIAFSPNSSWLAVSSDKG 248 (346)
T ss_pred eeeecCCchheEEEEEeCCCccEEEEEcCCC
Confidence 1111 12222223578999999999877654
No 477
>PLN02719 triacylglycerol lipase
Probab=63.58 E-value=10 Score=41.56 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=29.9
Q ss_pred CcHHHHHHHHHHHHHcCCCC----CCcEEEEEecccHHHHHHHHH
Q 004866 552 NSIKDFISCARFLIEKEIVK----EHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~d----~~ri~i~G~S~GG~l~~~~~~ 592 (726)
...+++.+.++.|+++ +-| .-+|.|.|||+||.|+..++.
T Consensus 274 SaReQVl~eV~rL~~~-Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 274 SAREQVLTEVKRLVER-YGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred hHHHHHHHHHHHHHHH-CCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 3456777888888764 222 358999999999999988764
No 478
>PLN02934 triacylglycerol lipase
Probab=63.29 E-value=11 Score=41.41 Aligned_cols=39 Identities=23% Similarity=0.183 Sum_probs=29.2
Q ss_pred CcHHHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHH
Q 004866 552 NSIKDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 552 ~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
..+..+...++.++++. ...+|.+.|||.||.+|..++.
T Consensus 302 ~Ay~~v~~~lk~ll~~~--p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 302 SAYYAVRSKLKSLLKEH--KNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred hHHHHHHHHHHHHHHHC--CCCeEEEeccccHHHHHHHHHH
Confidence 34566777777777652 2258999999999999988764
No 479
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=63.22 E-value=2.1e+02 Score=30.52 Aligned_cols=117 Identities=13% Similarity=-0.040 Sum_probs=56.8
Q ss_pred EEEEEECCCCceeccccccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeee--cCCceEEEEEEcCC
Q 004866 149 TLSVRNLNSGALCSKPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEE--SNENVYVNIRHTKD 226 (726)
Q Consensus 149 ~l~v~dl~tg~~~~~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~--~d~~~~~~~~~s~D 226 (726)
.|+.+|+++|+.+-.........+. .++..||+... ...|+.++..+++ ++... ........+.. .
T Consensus 252 ~l~a~d~~tG~~~W~~~~~~~~~p~--~~~~~vyv~~~-----~G~l~~~d~~tG~---~~W~~~~~~~~~~ssp~i--~ 319 (377)
T TIGR03300 252 RVAALDLRSGRVLWKRDASSYQGPA--VDDNRLYVTDA-----DGVVVALDRRSGS---ELWKNDELKYRQLTAPAV--V 319 (377)
T ss_pred EEEEEECCCCcEEEeeccCCccCce--EeCCEEEEECC-----CCeEEEEECCCCc---EEEccccccCCccccCEE--E
Confidence 4889999998754322211222333 34566776532 2478888887663 12211 11112222222 3
Q ss_pred CcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEecC
Q 004866 227 FHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFTDA 281 (726)
Q Consensus 227 g~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~ 281 (726)
+..|++...+ ..|+.+|..+++. ...+............-.++.||+.+..
T Consensus 320 g~~l~~~~~~---G~l~~~d~~tG~~-~~~~~~~~~~~~~sp~~~~~~l~v~~~d 370 (377)
T TIGR03300 320 GGYLVVGDFE---GYLHWLSREDGSF-VARLKTDGSGIASPPVVVGDGLLVQTRD 370 (377)
T ss_pred CCEEEEEeCC---CEEEEEECCCCCE-EEEEEcCCCccccCCEEECCEEEEEeCC
Confidence 5566655433 3688888877431 1122211111222222235668877653
No 480
>PLN03037 lipase class 3 family protein; Provisional
Probab=62.67 E-value=9.8 Score=41.76 Aligned_cols=37 Identities=22% Similarity=0.197 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHcCCC---CCCcEEEEEecccHHHHHHHHH
Q 004866 555 KDFISCARFLIEKEIV---KEHKLAGWGYSAGGLLVAAAIN 592 (726)
Q Consensus 555 ~D~~~~~~~l~~~~~~---d~~ri~i~G~S~GG~l~~~~~~ 592 (726)
+.+.+.+..|++. +. ..-+|.|.|||+||.||..++.
T Consensus 298 eQVl~eV~rLv~~-Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNF-FKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHh-ccccCCcceEEEeccCHHHHHHHHHHH
Confidence 4566677777653 22 2347999999999999988774
No 481
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=62.36 E-value=71 Score=35.24 Aligned_cols=99 Identities=12% Similarity=0.075 Sum_probs=60.0
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecC--CC-EEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKD--GQ-ALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspD--g~-~l~y~~~~~~~~~~~l~~ 197 (726)
.+....+||||+.++..+ .+|.++|+++++.+.... ..-+..+.|.-+ |- .-++.......+...+|.
T Consensus 146 ~~~sl~is~D~~~l~~as-------~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~ 218 (541)
T KOG4547|consen 146 LVSSLCISPDGKILLTAS-------RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWV 218 (541)
T ss_pred ccceEEEcCCCCEEEecc-------ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEE
Confidence 456778999999987763 259999999999876532 223455566554 22 233333344445556777
Q ss_pred EEcCCCC-ceeEEeeecCCceEEEEEEcCCCc
Q 004866 198 SIIGSTD-EDALLLEESNENVYVNIRHTKDFH 228 (726)
Q Consensus 198 ~~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~ 228 (726)
.+-.... .-...+..+|.+.+.+-....|+.
T Consensus 219 v~~~~kkks~~~sl~~~dipv~~ds~~~ed~~ 250 (541)
T KOG4547|consen 219 VEKEDKKKSLSCSLTVPDIPVTSDSGLLEDGT 250 (541)
T ss_pred EEcccccchhheeeccCCCCeEeccccccccc
Confidence 7754333 444556666666655444455555
No 482
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=62.34 E-value=1.5e+02 Score=33.31 Aligned_cols=108 Identities=16% Similarity=0.153 Sum_probs=66.5
Q ss_pred CcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCCceEEEEE
Q 004866 145 NDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIR 222 (726)
Q Consensus 145 ~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~ 222 (726)
+-+-.|.+||..+++...... .+++..+.-++||++++-...|. .|.+++|+... ....+....+..+ .+.
T Consensus 190 gtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDg-----tIrlWdLgqQr-Cl~T~~vH~e~VW-aL~ 262 (735)
T KOG0308|consen 190 GTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDG-----TIRLWDLGQQR-CLATYIVHKEGVW-ALQ 262 (735)
T ss_pred CcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCc-----eEEeeeccccc-eeeeEEeccCceE-EEe
Confidence 334579999999987554322 45777888999999998775553 57778887653 1222322222221 344
Q ss_pred EcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCc
Q 004866 223 HTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGL 263 (726)
Q Consensus 223 ~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~ 263 (726)
.+|+=++++.... ...|++.|+.++ .+.+.++..+..
T Consensus 263 ~~~sf~~vYsG~r---d~~i~~Tdl~n~-~~~tlick~daP 299 (735)
T KOG0308|consen 263 SSPSFTHVYSGGR---DGNIYRTDLRNP-AKSTLICKEDAP 299 (735)
T ss_pred eCCCcceEEecCC---CCcEEecccCCc-hhheEeecCCCc
Confidence 5666666653322 346899999875 344566655543
No 483
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=62.19 E-value=2.3e+02 Score=30.45 Aligned_cols=124 Identities=6% Similarity=0.032 Sum_probs=67.9
Q ss_pred eeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC
Q 004866 127 SEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD 204 (726)
Q Consensus 127 ~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~ 204 (726)
+.|.-+-+.|..+ |+...++.+||+++|++..... ...+..+.|.|-.-.+..+.. ....|.+.|.....
T Consensus 249 Ls~n~~~~nVLaS----gsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs----~D~~V~l~D~R~~~ 320 (463)
T KOG0270|consen 249 LSWNRNFRNVLAS----GSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGS----YDGTVALKDCRDPS 320 (463)
T ss_pred HHhccccceeEEe----cCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEecc----ccceEEeeeccCcc
Confidence 4455555556554 3445679999999998876543 457889999998766666532 22356666654321
Q ss_pred ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCC
Q 004866 205 EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEG 262 (726)
Q Consensus 205 ~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~ 262 (726)
..-.-+.. +.. .-.+.|.+-....++.+... ..||.+|+..+......+....+
T Consensus 321 ~s~~~wk~-~g~-VEkv~w~~~se~~f~~~tdd--G~v~~~D~R~~~~~vwt~~AHd~ 374 (463)
T KOG0270|consen 321 NSGKEWKF-DGE-VEKVAWDPHSENSFFVSTDD--GTVYYFDIRNPGKPVWTLKAHDD 374 (463)
T ss_pred ccCceEEe-ccc-eEEEEecCCCceeEEEecCC--ceEEeeecCCCCCceeEEEeccC
Confidence 10000000 000 11356666666555554322 35778888765433334443333
No 484
>PRK13615 lipoprotein LpqB; Provisional
Probab=61.67 E-value=56 Score=36.92 Aligned_cols=79 Identities=10% Similarity=0.048 Sum_probs=49.2
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc-cc-------ccccceeEEecCCCEEEEEEecCCCCCce
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ-------AVRVSNIAWAKDGQALIYVVTDQNKRPYQ 194 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~-------~~~~~~~~WspDg~~l~y~~~~~~~~~~~ 194 (726)
.+..+++|+||-++|.+++..|..+-.|-.+--.++.++.+ +. .....++.|..|++ |+...... ....+
T Consensus 418 ~I~~lrvSrDG~R~Avi~~~~g~~~V~va~V~R~~~~P~~L~~~p~~l~~~l~~v~sl~W~~~~~-laVl~~~~-~~~~~ 495 (557)
T PRK13615 418 RVVSLEVARDGARVLVQLETGAGPQLLVASIVRDGGVPTSLTTTPLELLASPGTPLDATWVDELD-VATLTLAP-DGERQ 495 (557)
T ss_pred eeEEEEeCCCccEEEEEEecCCCCEEEEEEEEeCCCcceEeeeccEEcccCcCcceeeEEcCCCE-EEEEeccC-CCCce
Confidence 57889999999999999876665444443333345533333 21 22456789999886 54443222 23346
Q ss_pred EEEEEcCCC
Q 004866 195 IYCSIIGST 203 (726)
Q Consensus 195 l~~~~l~t~ 203 (726)
++++.++..
T Consensus 496 v~~v~v~g~ 504 (557)
T PRK13615 496 VELHQVGGP 504 (557)
T ss_pred EEEEECCCc
Confidence 888888754
No 485
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=61.21 E-value=81 Score=31.79 Aligned_cols=104 Identities=15% Similarity=0.069 Sum_probs=65.0
Q ss_pred EeeceeeCC--CCCEEEEEEeCCCCcEEEEEEEECCCCceecccc---ccccceeEEecCCCEEEEEEecCCCCCceEEE
Q 004866 123 YEELSEVSP--DHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ---AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYC 197 (726)
Q Consensus 123 ~~~~~~~SP--DG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~---~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~ 197 (726)
.+..-+||| ||+.+|.+.+ + +|+.+|+.|....--.. ...+.++.+.|+-+.++.+.-|+ ..|.+
T Consensus 172 ~ftsg~WspHHdgnqv~tt~d--~----tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDd----gyvri 241 (370)
T KOG1007|consen 172 SFTSGAWSPHHDGNQVATTSD--S----TLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDD----GYVRI 241 (370)
T ss_pred eecccccCCCCccceEEEeCC--C----cEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCC----ccEEE
Confidence 344557998 9999887743 2 48999998764332111 22466788999988888876443 25666
Q ss_pred EEcCCCCceeEEeeecCCc-eEEEEEEcCCCcEEEEEEcCCC
Q 004866 198 SIIGSTDEDALLLEESNEN-VYVNIRHTKDFHFVCVHTFSTT 238 (726)
Q Consensus 198 ~~l~t~~~~~lv~~~~d~~-~~~~~~~s~Dg~~l~~~~~~~~ 238 (726)
+|....+. .+++-++.. +.-.+.+.|--..|+++..++.
T Consensus 242 WD~R~tk~--pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs 281 (370)
T KOG1007|consen 242 WDTRKTKF--PVQELPGHSHWVWAVRFNPEHDQLILSGGSDS 281 (370)
T ss_pred EeccCCCc--cccccCCCceEEEEEEecCccceEEEecCCCc
Confidence 77655432 233333333 3345677888778877665543
No 486
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=60.87 E-value=87 Score=32.05 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=59.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCcee-cc-c--c-ccccceeEEecCCCEEEEEEecCCCCCceEEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALC-SK-P--Q-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~-~~-~--~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~ 198 (726)
+...+|++|+..+|.+.+ .. ++.|+...+.... .. + . ...+..+.|+|-+..|.-...|++ . |+.
T Consensus 13 itchAwn~drt~iAv~~~--~~---evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drn---a--yVw 82 (361)
T KOG1523|consen 13 ITCHAWNSDRTQIAVSPN--NH---EVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRN---A--YVW 82 (361)
T ss_pred eeeeeecCCCceEEeccC--Cc---eEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCC---c--ccc
Confidence 344579999999999743 22 3667766666522 21 1 1 235677999999988977655432 2 333
Q ss_pred Ec-CCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEc
Q 004866 199 II-GSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 199 ~l-~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
.. ..+. ..+++.-+-+.. ...+.|||.+..+++.+.
T Consensus 83 ~~~~~~~WkptlvLlRiNrA-At~V~WsP~enkFAVgSg 120 (361)
T KOG1523|consen 83 TQPSGGTWKPTLVLLRINRA-ATCVKWSPKENKFAVGSG 120 (361)
T ss_pred ccCCCCeeccceeEEEeccc-eeeEeecCcCceEEeccC
Confidence 33 2222 344444333222 235789999887766543
No 487
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=59.92 E-value=2.2e+02 Score=29.67 Aligned_cols=56 Identities=20% Similarity=0.185 Sum_probs=37.2
Q ss_pred eeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecc-cc-ccccceeEEecCCCEEEEE
Q 004866 124 EELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSK-PQ-AVRVSNIAWAKDGQALIYV 184 (726)
Q Consensus 124 ~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~-~~-~~~~~~~~WspDg~~l~y~ 184 (726)
+..+++-|-..++|-++. ..+|.|||++||+.... +. ...+..++.|+-.-++|-.
T Consensus 154 Vr~vavdP~n~wf~tgs~-----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ 211 (460)
T KOG0285|consen 154 VRSVAVDPGNEWFATGSA-----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSA 211 (460)
T ss_pred EEEEeeCCCceeEEecCC-----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEe
Confidence 344567888887765431 24699999999986542 21 4456778888876666544
No 488
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=59.47 E-value=16 Score=40.84 Aligned_cols=58 Identities=16% Similarity=0.186 Sum_probs=32.6
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceeccc-----c-ccccceeEEecCCCEEEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKP-----Q-AVRVSNIAWAKDGQALIYV 184 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~-----~-~~~~~~~~WspDg~~l~y~ 184 (726)
..+..++|||||++|+-++..+ +.-++....+...... . .-.+-+..|+||+++|+-.
T Consensus 573 LTVT~l~FSpdg~~LLsvsRDR-----t~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTa 636 (764)
T KOG1063|consen 573 LTVTRLAFSPDGRYLLSVSRDR-----TVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATA 636 (764)
T ss_pred eEEEEEEECCCCcEEEEeecCc-----eEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEe
Confidence 4678889999999987664211 2344443222111110 0 1123456799999985433
No 489
>PHA02713 hypothetical protein; Provisional
Probab=59.39 E-value=3.1e+02 Score=31.19 Aligned_cols=190 Identities=11% Similarity=0.050 Sum_probs=93.4
Q ss_pred EEEEEEECCCCceecccc--ccccceeEEecCCCEEEEEEec-CCCCCceEEEEEcCCCCceeEEeeecCCceEEEEEEc
Q 004866 148 FTLSVRNLNSGALCSKPQ--AVRVSNIAWAKDGQALIYVVTD-QNKRPYQIYCSIIGSTDEDALLLEESNENVYVNIRHT 224 (726)
Q Consensus 148 ~~l~v~dl~tg~~~~~~~--~~~~~~~~WspDg~~l~y~~~~-~~~~~~~l~~~~l~t~~~~~lv~~~~d~~~~~~~~~s 224 (726)
..++.+|+.++....... ..+.....-.-+| .||...-. .......+.++|..+..-.. +-.-+........ ..
T Consensus 320 ~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g-~IYviGG~~~~~~~~sve~Ydp~~~~W~~-~~~mp~~r~~~~~-~~ 396 (557)
T PHA02713 320 NKVYKINIENKIHVELPPMIKNRCRFSLAVIDD-TIYAIGGQNGTNVERTIECYTMGDDKWKM-LPDMPIALSSYGM-CV 396 (557)
T ss_pred ceEEEEECCCCeEeeCCCCcchhhceeEEEECC-EEEEECCcCCCCCCceEEEEECCCCeEEE-CCCCCcccccccE-EE
Confidence 468899999887655433 1222212223344 46655321 11122457788876653111 1000111111111 12
Q ss_pred CCCcEEEEEEcCC--------------------CceEEEEEeCCCCCCCeEEeeccCCce-EEeeeecCCEEEEEecCcc
Q 004866 225 KDFHFVCVHTFST--------------------TSSKVFLINAADPFSGLTLIWECEGLA-HCIVEHHEGFLYLFTDAAK 283 (726)
Q Consensus 225 ~Dg~~l~~~~~~~--------------------~~~~l~~~d~~~~~~~~~~l~~~~~~~-~~~~~~~g~~l~~~t~~~~ 283 (726)
-+|+..++..... ..+.+..+|..+ .++..+.+..... ......-++.+|++....+
T Consensus 397 ~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~t--d~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~ 474 (557)
T PHA02713 397 LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVN--NIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKD 474 (557)
T ss_pred ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCC--CeEeecCCCCcccccCcEEEECCEEEEEeCCCC
Confidence 3444333322111 125688888877 4566555432211 1122234677888754321
Q ss_pred cCCCCCCeEEEEeeCCCCCCC-CCceEEeecCCCceEEEEeeeCCEEEEEEEeCCeeEEEEEecCC
Q 004866 284 EGQEADNHYLLRCPVDASFPS-RTWESVFIDDQGLVVEDVDFCKTHMALILREGRTYRLCSVSLPL 348 (726)
Q Consensus 284 ~~~~~~~~~l~~~~~~~~~~~-~~~~~v~~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~~l~~ 348 (726)
.. .....+.++|.+ . ..|+.+.+-.....-.++...+++|+++.-.+|...+-.+|..+
T Consensus 475 ~~--~~~~~ve~Ydp~----~~~~W~~~~~m~~~r~~~~~~~~~~~iyv~Gg~~~~~~~e~yd~~~ 534 (557)
T PHA02713 475 EK--NVKTCIFRYNTN----TYNGWELITTTESRLSALHTILHDNTIMMLHCYESYMLQDTFNVYT 534 (557)
T ss_pred CC--ccceeEEEecCC----CCCCeeEccccCcccccceeEEECCEEEEEeeecceeehhhcCccc
Confidence 11 011234566554 5 57986643333344456777789999988777765566666654
No 490
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=58.21 E-value=1.8e+02 Score=28.08 Aligned_cols=32 Identities=16% Similarity=0.025 Sum_probs=21.1
Q ss_pred cEEEeecccccccCCceEEeeceeeCCCCCEEEEEEe
Q 004866 105 EQKLLDYNQEAERFGGYAYEELSEVSPDHKFLAYTMY 141 (726)
Q Consensus 105 ~~~lld~n~~~~~~~~~~~~~~~~~SPDG~~la~~~~ 141 (726)
+.|+.--|+-..+ ++....|||+|..||-.++
T Consensus 78 p~v~~kr~khhkg-----siyc~~ws~~geliatgsn 109 (350)
T KOG0641|consen 78 PSVLCKRNKHHKG-----SIYCTAWSPCGELIATGSN 109 (350)
T ss_pred CeEEeeeccccCc-----cEEEEEecCccCeEEecCC
Confidence 3566655544332 4555689999999987653
No 491
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=57.97 E-value=2.2e+02 Score=29.03 Aligned_cols=114 Identities=15% Similarity=0.173 Sum_probs=64.5
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec---cccccccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS---KPQAVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~---~~~~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.++++.|+||-+.| |++.... .+|.-++.+ |+.+. ++.......++|.-+|+.. .+ + .|..+++.+.
T Consensus 87 nvS~LTynp~~rtL-Fav~n~p---~~iVElt~~-GdlirtiPL~g~~DpE~Ieyig~n~fv-i~--d--ER~~~l~~~~ 156 (316)
T COG3204 87 NVSSLTYNPDTRTL-FAVTNKP---AAIVELTKE-GDLIRTIPLTGFSDPETIEYIGGNQFV-IV--D--ERDRALYLFT 156 (316)
T ss_pred cccceeeCCCcceE-EEecCCC---ceEEEEecC-CceEEEecccccCChhHeEEecCCEEE-EE--e--hhcceEEEEE
Confidence 58889999999987 5443333 356666665 44433 2222344567898777533 32 2 2345677776
Q ss_pred cCCCC-----ce-eEEeeecC--CceEEEEEEcCCCcEEEEEEcCCCceEEEEEeC
Q 004866 200 IGSTD-----ED-ALLLEESN--ENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINA 247 (726)
Q Consensus 200 l~t~~-----~~-~lv~~~~d--~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~ 247 (726)
+..+. .. .+..+... ..-|-+++|+|..+.+++.-.+ ....||.++.
T Consensus 157 vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr-~P~~I~~~~~ 211 (316)
T COG3204 157 VDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKER-NPIGIFEVTQ 211 (316)
T ss_pred EcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEcc-CCcEEEEEec
Confidence 65431 11 11111111 1234689999999988775543 3456676663
No 492
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=57.85 E-value=54 Score=27.97 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.0
Q ss_pred eeEEecCCCEEEEEEec
Q 004866 171 NIAWAKDGQALIYVVTD 187 (726)
Q Consensus 171 ~~~WspDg~~l~y~~~~ 187 (726)
.=.|||||++|-||-+|
T Consensus 72 vHvfSpDG~~lSFTYND 88 (122)
T PF12566_consen 72 VHVFSPDGSWLSFTYND 88 (122)
T ss_pred ceEECCCCCEEEEEecc
Confidence 34799999999999554
No 493
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=57.67 E-value=2.6e+02 Score=29.62 Aligned_cols=109 Identities=13% Similarity=0.106 Sum_probs=58.3
Q ss_pred eCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCC-ce
Q 004866 129 VSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTD-ED 206 (726)
Q Consensus 129 ~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~-~~ 206 (726)
+--+..++... +..|+ -+.+.++....|...+..- ......++||||++.|.+.- |..+|+..+....- .+
T Consensus 115 ~~~~~~sv~v~-dkagD-~~~~di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaD-----RDEkIRvs~ypa~f~Ie 187 (390)
T KOG3914|consen 115 FIREDTSVLVA-DKAGD-VYSFDILSADSGRCEPILGHVSMLLDVAVSPDDQFIITAD-----RDEKIRVSRYPATFVIE 187 (390)
T ss_pred eeeccceEEEE-eecCC-ceeeeeecccccCcchhhhhhhhhheeeecCCCCEEEEec-----CCceEEEEecCcccchh
Confidence 33455555454 44454 5667777776655444322 33567899999999887763 33467666553221 11
Q ss_pred eEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCC
Q 004866 207 ALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADP 250 (726)
Q Consensus 207 ~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~ 250 (726)
...+ ....|.-.++..++ .. ++ +.++...|+++|..++
T Consensus 188 sfcl--GH~eFVS~isl~~~-~~-Ll--S~sGD~tlr~Wd~~sg 225 (390)
T KOG3914|consen 188 SFCL--GHKEFVSTISLTDN-YL-LL--SGSGDKTLRLWDITSG 225 (390)
T ss_pred hhcc--ccHhheeeeeeccC-ce-ee--ecCCCCcEEEEecccC
Confidence 1111 11223334555433 22 33 2334567888888774
No 494
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=57.66 E-value=2.9e+02 Score=30.22 Aligned_cols=155 Identities=7% Similarity=0.028 Sum_probs=87.7
Q ss_pred EeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceec-cccc-c-ccceeEEecCCCEEEEEEecCCCCCceEEEEE
Q 004866 123 YEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCS-KPQA-V-RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSI 199 (726)
Q Consensus 123 ~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~-~~~~-~-~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~ 199 (726)
.+..+.......+||-+++ +| +|-|..++|+.... .+.. + .+.-+.+||-.|.++-+..+.. .|-++|
T Consensus 123 tvt~v~YN~~DeyiAsvs~-gG----diiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G----~VtlwD 193 (673)
T KOG4378|consen 123 TVTYVDYNNTDEYIASVSD-GG----DIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKG----AVTLWD 193 (673)
T ss_pred eeEEEEecCCcceeEEecc-CC----cEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCC----eEEEEe
Confidence 4455566677778877653 34 38888998885433 2222 1 2345789998888887765543 566777
Q ss_pred cCCCCceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEEeCCCCCCCeEEeeccCCceEEeeeecCCEEEEEe
Q 004866 200 IGSTDEDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLINAADPFSGLTLIWECEGLAHCIVEHHEGFLYLFT 279 (726)
Q Consensus 200 l~t~~~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t 279 (726)
+.... ...-+.+....-..++++||....|+++..- ...|+++|..... ...+++-...-....+.++|..|..-+
T Consensus 194 v~g~s-p~~~~~~~HsAP~~gicfspsne~l~vsVG~--Dkki~~yD~~s~~-s~~~l~y~~Plstvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 194 VQGMS-PIFHASEAHSAPCRGICFSPSNEALLVSVGY--DKKINIYDIRSQA-STDRLTYSHPLSTVAFSECGTYLCAGN 269 (673)
T ss_pred ccCCC-cccchhhhccCCcCcceecCCccceEEEecc--cceEEEeeccccc-ccceeeecCCcceeeecCCceEEEeec
Confidence 64321 1111111111112367899999988876643 4679999987532 223333222222334455665544433
Q ss_pred cCcccCCCCCCeEEEEeeCC
Q 004866 280 DAAKEGQEADNHYLLRCPVD 299 (726)
Q Consensus 280 ~~~~~~~~~~~~~l~~~~~~ 299 (726)
. +.+|+.+|+.
T Consensus 270 s---------~G~~i~YD~R 280 (673)
T KOG4378|consen 270 S---------KGELIAYDMR 280 (673)
T ss_pred C---------CceEEEEecc
Confidence 2 2458888876
No 495
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=56.51 E-value=2.7e+02 Score=29.62 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=30.8
Q ss_pred ccceeEEecCCCEEEEEEecCCCCCceEEEE-EcCCC-C---ceeEEeeec-C-----CceEEEEEEcCCCcEEEEEEc
Q 004866 168 RVSNIAWAKDGQALIYVVTDQNKRPYQIYCS-IIGST-D---EDALLLEES-N-----ENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 168 ~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~-~l~t~-~---~~~lv~~~~-d-----~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
...+++|.+|| ||++. ..+|+++ +.... . ..++++... . ....-++.+.|||+ |+++..
T Consensus 73 ~p~Gi~~~~~G--lyV~~------~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~-LYv~~G 142 (367)
T TIGR02604 73 MVTGLAVAVGG--VYVAT------PPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW-LYFNHG 142 (367)
T ss_pred CccceeEecCC--EEEeC------CCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC-EEEecc
Confidence 34678899888 66652 1257766 33221 1 122333221 1 11123578899995 666544
No 496
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=56.39 E-value=43 Score=36.08 Aligned_cols=64 Identities=11% Similarity=-0.083 Sum_probs=34.1
Q ss_pred ccceeEEecCCCEEEEEEecCCCCCceEEEEEcCCCCceeEEeeecCC--------------ceE---EEEEEcCCCcEE
Q 004866 168 RVSNIAWAKDGQALIYVVTDQNKRPYQIYCSIIGSTDEDALLLEESNE--------------NVY---VNIRHTKDFHFV 230 (726)
Q Consensus 168 ~~~~~~WspDg~~l~y~~~~~~~~~~~l~~~~l~t~~~~~lv~~~~d~--------------~~~---~~~~~s~Dg~~l 230 (726)
-+..+.-|.|.|.||++. +...+|..+|+..+...+++.+..-. ... --++.|.|||.|
T Consensus 313 LitDI~iSlDDrfLYvs~----W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRl 388 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSN----WLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRL 388 (461)
T ss_dssp ----EEE-TTS-EEEEEE----TTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEE
T ss_pred ceEeEEEccCCCEEEEEc----ccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEE
Confidence 356788999999998874 45568999998776655555431100 000 125678999999
Q ss_pred EEEEc
Q 004866 231 CVHTF 235 (726)
Q Consensus 231 ~~~~~ 235 (726)
+++.+
T Consensus 389 YvTnS 393 (461)
T PF05694_consen 389 YVTNS 393 (461)
T ss_dssp EEE--
T ss_pred EEEee
Confidence 88664
No 497
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=54.58 E-value=16 Score=38.47 Aligned_cols=37 Identities=27% Similarity=0.083 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEEecccHHHHHHHHHc
Q 004866 555 KDFISCARFLIEKEIVKEHKLAGWGYSAGGLLVAAAINC 593 (726)
Q Consensus 555 ~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~l~~~~~~~ 593 (726)
..+.+.++.|++..- .-+|.+.|||+||.||..++..
T Consensus 155 ~~~~~~~~~L~~~~~--~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--NYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcC--CcEEEEecCChHHHHHHHHHHH
Confidence 556667777776532 4689999999999999887753
No 498
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=54.37 E-value=1.4e+02 Score=33.64 Aligned_cols=23 Identities=13% Similarity=-0.038 Sum_probs=17.2
Q ss_pred cCCceEEEEEEcCCCcEEEEEEc
Q 004866 213 SNENVYVNIRHTKDFHFVCVHTF 235 (726)
Q Consensus 213 ~d~~~~~~~~~s~Dg~~l~~~~~ 235 (726)
+...-+.++.+|||++.|+++..
T Consensus 499 P~gaE~tG~~fspDg~tlFvniQ 521 (524)
T PF05787_consen 499 PNGAEITGPCFSPDGRTLFVNIQ 521 (524)
T ss_pred CCCcccccceECCCCCEEEEEEe
Confidence 33444568899999999988764
No 499
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=53.32 E-value=75 Score=34.38 Aligned_cols=81 Identities=10% Similarity=0.022 Sum_probs=46.8
Q ss_pred CccEEEEEcCCCCCCCCccchHHHHHHHHCCcEEEEEccCCCCCCCCcccccccccCCCCcHHHHHHHHHHHHHcCCCCC
Q 004866 493 QNPGLLHGHGAYGELLDKRWRSELKSLLDRGWVVAFADVRGGGGGGKKWHHDGRRTKKLNSIKDFISCARFLIEKEIVKE 572 (726)
Q Consensus 493 ~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~ 572 (726)
+.|+|+..---...-..+.....+..|.+.|+.|+-|.. |. +. ....+..+..+.+++...+..+........
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~~G~~ii~P~~-g~--la----~~~~g~gr~~~~~~I~~~~~~~~~~~~l~g 188 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRSRGVEIIGPAS-GR--LA----CGDVGPGRMAEPEEIVAAAERALSPKDLAG 188 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHHCCCEEECCCC-cc--cc----CCCcCCCCCCCHHHHHHHHHHHhhhcccCC
Confidence 468888763221111233445566788889999886653 21 10 011122234678888887766654333455
Q ss_pred CcEEEEEe
Q 004866 573 HKLAGWGY 580 (726)
Q Consensus 573 ~ri~i~G~ 580 (726)
.++.|.|+
T Consensus 189 k~vlITgG 196 (399)
T PRK05579 189 KRVLITAG 196 (399)
T ss_pred CEEEEeCC
Confidence 78999999
No 500
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=53.12 E-value=2.6e+02 Score=28.44 Aligned_cols=113 Identities=15% Similarity=0.046 Sum_probs=67.6
Q ss_pred EEeeceeeCCCCCEEEEEEeCCCCcEEEEEEEECCCCceecccc-ccccceeEEecCCC--EEEEEEecCCCCCceEEEE
Q 004866 122 AYEELSEVSPDHKFLAYTMYDKDNDYFTLSVRNLNSGALCSKPQ-AVRVSNIAWAKDGQ--ALIYVVTDQNKRPYQIYCS 198 (726)
Q Consensus 122 ~~~~~~~~SPDG~~la~~~~~~g~e~~~l~v~dl~tg~~~~~~~-~~~~~~~~WspDg~--~l~y~~~~~~~~~~~l~~~ 198 (726)
+.+....|=|=..-+ |+ .++-.-+|.|||..|-+...... ++.+..-+|||=.. .|.-+. .+..+|.+-
T Consensus 102 y~iss~~WyP~DtGm-Ft---ssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~g----tr~~~VrLC 173 (397)
T KOG4283|consen 102 YAISSAIWYPIDTGM-FT---SSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAG----TRDVQVRLC 173 (397)
T ss_pred eeeeeeEEeeecCce-ee---cccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEe----cCCCcEEEE
Confidence 355555565533333 22 23334579999998865544322 66777788998654 343332 234578888
Q ss_pred EcCCCC-ceeEEeeecCCceEEEEEEcCCCcEEEEEEcCCCceEEEEE
Q 004866 199 IIGSTD-EDALLLEESNENVYVNIRHTKDFHFVCVHTFSTTSSKVFLI 245 (726)
Q Consensus 199 ~l~t~~-~~~lv~~~~d~~~~~~~~~s~Dg~~l~~~~~~~~~~~l~~~ 245 (726)
|+.++. .-.| -.-.+ -...+.|||...|++.+..-++.-.+|=+
T Consensus 174 Di~SGs~sH~L-sGHr~--~vlaV~Wsp~~e~vLatgsaDg~irlWDi 218 (397)
T KOG4283|consen 174 DIASGSFSHTL-SGHRD--GVLAVEWSPSSEWVLATGSADGAIRLWDI 218 (397)
T ss_pred eccCCcceeee-ccccC--ceEEEEeccCceeEEEecCCCceEEEEEe
Confidence 998886 3322 21112 23578999999999887765554444433
Done!