Query 004867
Match_columns 726
No_of_seqs 384 out of 2887
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:17:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004867.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004867hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 2E-111 5E-116 977.1 70.1 645 1-725 2-651 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 4.8E-99 2E-103 867.1 67.1 589 1-700 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 9.1E-98 3E-102 856.5 58.0 587 2-699 3-603 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 2E-91 6.9E-96 796.6 49.2 541 2-641 5-553 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 2.5E-81 8.6E-86 708.2 50.7 498 2-631 3-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 8.6E-65 2.9E-69 559.3 41.8 380 1-382 23-403 (404)
7 3qfu_A 78 kDa glucose-regulate 100.0 2.3E-63 7.9E-68 546.2 41.2 374 3-381 20-394 (394)
8 4gni_A Putative heat shock pro 100.0 2.6E-63 9E-68 548.1 36.2 378 1-383 13-404 (409)
9 1dkg_D Molecular chaperone DNA 100.0 2.7E-61 9.3E-66 527.6 37.6 372 2-381 3-383 (383)
10 1jce_A ROD shape-determining p 100.0 7E-41 2.4E-45 360.4 22.4 309 2-381 4-327 (344)
11 4e81_A Chaperone protein DNAK; 100.0 8.6E-34 2.9E-38 280.7 25.6 210 390-700 2-216 (219)
12 1u00_A HSC66, chaperone protei 100.0 9.6E-32 3.3E-36 268.9 27.5 210 392-702 1-215 (227)
13 2fsj_A Hypothetical protein TA 100.0 2.2E-28 7.4E-33 262.1 13.7 227 112-378 95-343 (346)
14 2ych_A Competence protein PILM 99.9 1.8E-27 6E-32 259.1 15.6 306 3-368 15-342 (377)
15 3n8e_A Stress-70 protein, mito 99.9 1.4E-26 4.9E-31 221.3 15.6 159 387-641 18-181 (182)
16 3h1q_A Ethanolamine utilizatio 99.9 1.6E-25 5.4E-30 232.4 20.2 202 116-377 71-272 (272)
17 1k8k_A ARP3, actin-like protei 99.9 1.5E-24 5.2E-29 239.1 17.8 227 137-379 107-387 (418)
18 4a2a_A Cell division protein F 99.9 6E-24 2E-28 232.5 21.7 199 151-380 168-394 (419)
19 2fxu_A Alpha-actin-1, actin, a 99.9 1.9E-24 6.3E-29 234.7 14.7 213 138-378 101-348 (375)
20 3h0x_A 78 kDa glucose-regulate 99.9 3.5E-23 1.2E-27 192.8 15.8 146 391-631 2-152 (152)
21 3dob_A Heat shock 70 kDa prote 99.9 4.1E-23 1.4E-27 192.0 13.7 146 391-631 2-152 (152)
22 3dqg_A Heat shock 70 kDa prote 99.9 2.9E-23 1E-27 192.7 12.4 145 391-631 2-151 (151)
23 2zgy_A Plasmid segregation pro 99.9 2.4E-22 8.1E-27 213.4 13.4 227 110-377 72-319 (320)
24 2op6_A Heat shock 70 kDa prote 99.9 2E-21 7E-26 182.1 15.1 146 391-631 2-152 (152)
25 1k8k_B ARP2, actin-like protei 99.8 4.3E-20 1.5E-24 201.4 2.7 214 138-379 105-364 (394)
26 4ehu_A Activator of 2-hydroxyi 99.8 1.8E-18 6.2E-23 179.5 14.5 188 162-380 68-255 (276)
27 3js6_A Uncharacterized PARM pr 99.7 1.3E-16 4.3E-21 170.7 11.2 205 138-381 114-338 (355)
28 1q5l_A Chaperone protein DNAK; 99.6 3.5E-15 1.2E-19 135.9 9.2 99 386-497 14-117 (135)
29 4apw_A ALP12; actin-like prote 99.6 6E-16 2E-20 164.2 4.3 203 138-379 106-324 (329)
30 3dwl_A Actin-related protein 3 99.4 8.4E-14 2.9E-18 152.2 6.3 222 138-378 124-395 (427)
31 3qb0_A Actin-related protein 4 99.4 1.5E-12 5E-17 143.8 14.6 178 2-244 24-209 (498)
32 3lof_A Heat shock 70 kDa prote 99.3 1.1E-11 3.9E-16 109.4 11.5 82 619-701 3-85 (113)
33 2d0o_A DIOL dehydratase-reacti 99.1 6.5E-10 2.2E-14 119.8 15.5 197 150-379 367-604 (610)
34 4fo0_A Actin-related protein 8 99.1 1.4E-09 4.7E-14 125.0 18.2 110 123-245 178-294 (593)
35 1nbw_A Glycerol dehydratase re 99.1 8.8E-11 3E-15 127.0 6.8 194 152-378 371-605 (607)
36 2p32_A Heat shock 70 kDa prote 99.1 2.1E-10 7E-15 102.3 7.9 81 619-700 12-93 (120)
37 1ud0_A HSC70, 70 kDa heat-shoc 99.0 5E-10 1.7E-14 98.9 6.6 78 623-701 2-80 (113)
38 1hux_A Activator of (R)-2-hydr 98.8 4.5E-07 1.5E-11 92.9 21.0 72 305-380 186-257 (270)
39 4am6_A Actin-like protein ARP8 97.9 3.3E-05 1.1E-09 86.3 9.6 127 138-282 222-350 (655)
40 2ews_A Pantothenate kinase; PA 97.2 0.0046 1.6E-07 63.1 14.2 75 298-377 207-286 (287)
41 2ivn_A O-sialoglycoprotein end 96.9 0.34 1.2E-05 50.4 25.6 65 311-380 229-299 (330)
42 1t6c_A Exopolyphosphatase; alp 96.7 0.014 4.9E-07 60.5 12.9 78 153-238 100-177 (315)
43 2i7n_A Pantothenate kinase 1; 96.6 0.009 3.1E-07 62.6 10.9 46 332-377 306-358 (360)
44 2e2o_A Hexokinase; acetate and 96.2 0.86 3E-05 46.4 23.0 48 331-379 239-287 (299)
45 3l0q_A Xylulose kinase; xlylul 96.0 0.008 2.7E-07 67.8 6.9 87 297-384 408-494 (554)
46 4bc3_A Xylulose kinase; transf 95.8 0.01 3.5E-07 66.6 7.0 76 304-380 407-482 (538)
47 3vov_A Glucokinase, hexokinase 95.8 1.2 4.1E-05 45.5 22.2 44 163-211 98-141 (302)
48 2itm_A Xylulose kinase, xylulo 95.8 0.0083 2.8E-07 66.5 5.8 81 299-382 357-437 (484)
49 3vgl_A Glucokinase; ROK family 95.7 0.72 2.5E-05 47.7 20.3 44 163-211 96-139 (321)
50 3hz6_A Xylulokinase; xylulose, 95.7 0.011 3.7E-07 66.0 6.2 79 299-383 375-454 (511)
51 2zf5_O Glycerol kinase; hypert 95.7 0.011 3.9E-07 65.6 6.4 79 299-382 365-443 (497)
52 3ll3_A Gluconate kinase; xylul 95.6 0.012 4.1E-07 65.5 6.3 78 299-383 364-444 (504)
53 3i8b_A Xylulose kinase; strain 95.5 0.011 3.7E-07 66.0 5.2 78 299-381 395-473 (515)
54 2ch5_A NAGK protein; transfera 95.4 2.9 0.0001 43.4 25.8 62 136-207 70-134 (347)
55 4db3_A Glcnac kinase, N-acetyl 95.4 2 6.8E-05 44.4 22.3 44 163-211 120-163 (327)
56 3ezw_A Glycerol kinase; glycer 95.1 0.023 7.9E-07 63.5 6.6 82 299-384 372-454 (526)
57 3jvp_A Ribulokinase; PSI-II, N 95.1 0.016 5.3E-07 65.7 5.1 80 299-382 410-490 (572)
58 2d4w_A Glycerol kinase; alpha 95.0 0.031 1.1E-06 62.2 7.1 80 299-382 373-453 (504)
59 3g25_A Glycerol kinase; IDP007 94.9 0.021 7.1E-07 63.5 5.3 82 299-384 374-456 (501)
60 2gup_A ROK family protein; sug 94.9 3.5 0.00012 41.6 21.9 42 163-211 94-135 (292)
61 3ifr_A Carbohydrate kinase, FG 94.9 0.015 5.1E-07 64.8 4.1 80 299-383 371-451 (508)
62 4e1j_A Glycerol kinase; struct 94.8 0.014 4.8E-07 65.2 3.7 52 331-383 425-476 (520)
63 2dpn_A Glycerol kinase; thermu 94.8 0.032 1.1E-06 62.0 6.5 80 299-382 368-448 (495)
64 4htl_A Beta-glucoside kinase; 94.7 1 3.5E-05 46.0 17.3 49 331-379 237-291 (297)
65 3h3n_X Glycerol kinase; ATP-bi 94.6 0.024 8.3E-07 63.0 5.1 82 299-384 373-455 (506)
66 2p3r_A Glycerol kinase; glycer 94.6 0.018 6.3E-07 64.1 4.0 81 299-383 371-452 (510)
67 3r8e_A Hypothetical sugar kina 94.5 0.18 6.1E-06 52.4 11.1 48 331-378 260-318 (321)
68 2w40_A Glycerol kinase, putati 94.5 0.046 1.6E-06 60.8 6.9 81 299-383 376-458 (503)
69 2qm1_A Glucokinase; alpha-beta 94.1 4.3 0.00015 41.6 20.8 44 163-211 108-151 (326)
70 2uyt_A Rhamnulokinase; rhamnos 93.8 0.041 1.4E-06 61.0 4.5 78 297-379 361-439 (489)
71 3mdq_A Exopolyphosphatase; str 92.8 0.2 6.8E-06 51.8 7.7 79 153-238 92-170 (315)
72 1z6r_A MLC protein; transcript 92.2 5.1 0.00018 42.6 18.2 44 163-211 186-229 (406)
73 2hoe_A N-acetylglucosamine kin 91.8 3.7 0.00013 43.3 16.4 245 3-378 89-370 (380)
74 3h6e_A Carbohydrate kinase, FG 91.5 0.16 5.3E-06 56.0 5.2 72 304-380 362-436 (482)
75 3cer_A Possible exopolyphospha 91.0 0.57 1.9E-05 49.0 8.7 81 153-238 105-191 (343)
76 3eno_A Putative O-sialoglycopr 90.6 17 0.00058 37.5 20.7 67 310-381 233-305 (334)
77 1u6z_A Exopolyphosphatase; alp 88.0 1.5 5.3E-05 48.4 9.7 76 154-238 100-176 (513)
78 1zc6_A Probable N-acetylglucos 87.6 25 0.00087 35.4 24.8 63 307-378 228-292 (305)
79 3hi0_A Putative exopolyphospha 84.2 3.3 0.00011 45.7 9.8 76 152-237 102-178 (508)
80 1iv0_A Hypothetical protein; r 82.8 0.81 2.8E-05 38.2 3.2 21 1-21 1-21 (98)
81 3en9_A Glycoprotease, O-sialog 82.6 63 0.0021 35.6 24.6 184 136-355 72-272 (540)
82 3o8m_A Hexokinase; rnaseh-like 81.2 20 0.00069 38.9 14.4 59 149-214 184-244 (485)
83 2yhx_A Hexokinase B; transfera 76.7 5.5 0.00019 43.1 8.2 56 151-213 164-221 (457)
84 3ven_A O-carbamoyltransferase 76.1 33 0.0011 38.1 14.2 77 301-382 281-360 (576)
85 4g9i_A Hydrogenase maturation 74.8 5.9 0.0002 45.9 8.2 63 314-381 693-761 (772)
86 3aap_A Ectonucleoside triphosp 74.7 3.5 0.00012 43.1 5.8 20 193-212 139-158 (353)
87 3epq_A Putative fructokinase; 74.2 27 0.00091 35.3 12.3 51 153-211 90-140 (302)
88 1vhx_A Putative holliday junct 73.8 1.7 5.9E-05 39.4 2.8 21 1-21 3-23 (150)
89 2ap1_A Putative regulator prot 73.7 37 0.0012 34.5 13.4 44 163-211 120-163 (327)
90 2yhw_A Bifunctional UDP-N-acet 66.9 86 0.0029 31.9 14.5 44 163-211 131-174 (343)
91 1z05_A Transcriptional regulat 66.0 45 0.0016 35.4 12.5 44 163-211 208-251 (429)
92 3cj1_A Ectonucleoside triphosp 64.6 10 0.00034 41.1 6.8 20 193-212 189-208 (456)
93 3ttc_A HYPF, transcriptional r 64.4 16 0.00055 41.2 8.6 64 311-379 584-651 (657)
94 1hjr_A Holliday junction resol 64.0 6.7 0.00023 35.7 4.5 19 1-19 1-19 (158)
95 1nu0_A Hypothetical protein YQ 60.5 6.4 0.00022 35.0 3.6 20 2-21 4-23 (138)
96 3vth_A Hydrogenase maturation 60.2 21 0.00072 41.1 8.8 62 314-380 681-748 (761)
97 4ep4_A Crossover junction endo 58.6 3.8 0.00013 37.7 1.8 20 1-20 1-20 (166)
98 2e1z_A Propionate kinase; TDCD 55.9 1.5E+02 0.005 31.3 13.6 45 308-356 311-356 (415)
99 3cqy_A Anhydro-N-acetylmuramic 54.1 17 0.0006 37.8 6.1 69 305-379 267-342 (370)
100 3qbx_A Anhydro-N-acetylmuramic 54.0 23 0.00079 36.8 7.0 61 314-379 269-336 (371)
101 1bdg_A Hexokinase; phosphotran 52.4 59 0.002 34.9 10.3 64 143-213 165-230 (451)
102 2ews_A Pantothenate kinase; PA 51.7 8.3 0.00029 38.9 3.2 20 2-21 21-40 (287)
103 2odv_A Plectin 1, HD1; plakin 51.3 1.1E+02 0.0038 29.5 11.1 92 598-702 41-141 (235)
104 2w40_A Glycerol kinase, putati 50.2 9.3 0.00032 41.9 3.6 20 2-21 5-24 (503)
105 3ll3_A Gluconate kinase; xylul 49.7 10 0.00035 41.7 3.8 20 2-21 5-24 (504)
106 3zx3_A Ectonucleoside triphosp 49.0 28 0.00095 37.4 6.9 44 167-212 151-199 (452)
107 2dpn_A Glycerol kinase; thermu 48.2 8.8 0.0003 42.0 3.0 20 2-21 3-22 (495)
108 3ezw_A Glycerol kinase; glycer 47.4 10 0.00035 41.8 3.4 19 3-21 6-24 (526)
109 3g25_A Glycerol kinase; IDP007 46.7 10 0.00034 41.6 3.2 20 2-21 7-26 (501)
110 3h3n_X Glycerol kinase; ATP-bi 45.9 11 0.00038 41.3 3.4 20 2-21 6-25 (506)
111 3djc_A Type III pantothenate k 45.8 13 0.00044 37.0 3.5 21 2-22 3-23 (266)
112 3ifr_A Carbohydrate kinase, FG 45.6 13 0.00046 40.7 4.0 21 2-22 8-28 (508)
113 3o8m_A Hexokinase; rnaseh-like 44.9 49 0.0017 35.8 8.2 30 193-222 79-109 (485)
114 4e1j_A Glycerol kinase; struct 44.4 13 0.00044 41.0 3.6 20 2-21 27-46 (520)
115 3hm8_A Hexokinase-3; glucose, 44.3 2.4E+02 0.0083 30.0 13.3 58 149-213 159-219 (445)
116 3l0q_A Xylulose kinase; xlylul 44.1 15 0.00051 40.9 4.0 20 2-21 6-25 (554)
117 2p3r_A Glycerol kinase; glycer 43.9 12 0.00041 41.1 3.3 20 2-21 4-23 (510)
118 4bc3_A Xylulose kinase; transf 43.9 14 0.00048 40.9 3.8 20 2-21 11-30 (538)
119 3i8b_A Xylulose kinase; strain 43.4 13 0.00044 41.0 3.3 18 2-19 6-23 (515)
120 1hnj_A Beta-ketoacyl-acyl carr 42.1 28 0.00096 35.2 5.6 50 306-358 212-261 (317)
121 3hz6_A Xylulokinase; xylulose, 41.7 13 0.00045 40.8 3.1 20 2-21 6-25 (511)
122 4ijn_A Acetate kinase, acetoki 41.6 1.4E+02 0.0048 31.2 10.6 47 306-356 302-349 (398)
123 2zf5_O Glycerol kinase; hypert 41.3 14 0.00048 40.4 3.3 20 2-21 4-23 (497)
124 3h6e_A Carbohydrate kinase, FG 41.1 11 0.00039 41.0 2.4 20 2-21 7-26 (482)
125 3f9m_A Glucokinase; hexokinase 41.0 71 0.0024 34.4 8.6 51 193-246 76-135 (470)
126 3cet_A Conserved archaeal prot 40.9 16 0.00056 37.3 3.4 37 169-212 109-145 (334)
127 2uyt_A Rhamnulokinase; rhamnos 40.8 11 0.00037 41.2 2.3 19 2-20 5-23 (489)
128 3l39_A Putative PHOU-like phos 40.5 2.5E+02 0.0084 26.7 13.7 107 618-724 56-176 (227)
129 3f9m_A Glucokinase; hexokinase 40.5 1.5E+02 0.0052 31.8 11.0 58 149-213 183-243 (470)
130 3khy_A Propionate kinase; csgi 40.5 1.3E+02 0.0045 31.2 10.1 45 308-356 294-339 (384)
131 3jvp_A Ribulokinase; PSI-II, N 40.1 16 0.00054 40.8 3.5 19 2-20 6-24 (572)
132 2itm_A Xylulose kinase, xylulo 39.5 14 0.0005 40.1 3.0 19 3-21 2-20 (484)
133 3nmd_A CGMP dependent protein 39.3 67 0.0023 24.7 5.7 48 602-650 23-71 (72)
134 2yhx_A Hexokinase B; transfera 39.1 1E+02 0.0034 33.1 9.5 53 192-244 59-117 (457)
135 2d4w_A Glycerol kinase; alpha 37.5 16 0.00056 40.0 3.0 20 2-21 3-22 (504)
136 1d7m_A Cortexillin I; coiled-c 35.6 1.2E+02 0.0042 24.0 6.8 12 683-694 47-58 (101)
137 2ebd_A 3-oxoacyl-[acyl-carrier 34.2 42 0.0014 33.7 5.3 47 309-358 207-253 (309)
138 1ub7_A 3-oxoacyl-[acyl-carrier 34.1 38 0.0013 34.3 5.0 48 308-358 216-263 (322)
139 2aa4_A Mannac kinase, putative 34.1 31 0.0011 34.3 4.3 46 332-377 234-286 (289)
140 1zbs_A Hypothetical protein PG 33.4 25 0.00087 35.2 3.5 67 306-379 211-280 (291)
141 2wl8_A Peroxisomal biogenesis 33.4 1E+02 0.0034 26.7 6.6 45 655-700 33-77 (126)
142 3bex_A Type III pantothenate k 32.6 24 0.00083 34.6 3.0 21 2-22 4-24 (249)
143 3hm8_A Hexokinase-3; glucose, 32.5 1.2E+02 0.004 32.4 8.5 34 192-226 57-90 (445)
144 3zyy_X Iron-sulfur cluster bin 32.2 1.8E+02 0.006 32.6 10.2 40 305-344 263-302 (631)
145 1h7c_A Tubulin-specific chaper 30.6 1.6E+02 0.0056 24.6 7.4 43 647-689 61-103 (108)
146 3htv_A D-allose kinase, alloki 29.9 85 0.0029 31.6 6.8 48 331-378 239-298 (310)
147 1zow_A 3-oxoacyl-[acyl-carrier 29.6 58 0.002 32.7 5.5 48 308-358 208-255 (313)
148 3uun_A Dystrophin; triple heli 29.3 1.9E+02 0.0065 23.7 8.0 16 626-641 10-25 (119)
149 2x3e_A 3-oxoacyl-[acyl-carrier 28.8 57 0.0019 33.2 5.3 47 309-358 221-267 (331)
150 2h3g_X Biosynthetic protein; p 28.6 35 0.0012 33.8 3.5 20 3-22 2-21 (268)
151 3zyy_X Iron-sulfur cluster bin 28.3 83 0.0028 35.2 6.7 57 295-352 499-555 (631)
152 1saz_A Probable butyrate kinas 28.2 19 0.00065 37.8 1.5 48 331-378 295-347 (381)
153 1zxo_A Conserved hypothetical 28.0 25 0.00085 35.2 2.3 67 307-377 210-276 (291)
154 1mzj_A Beta-ketoacylsynthase I 28.0 60 0.0021 33.1 5.3 47 309-358 228-274 (339)
155 1zbs_A Hypothetical protein PG 27.9 14 0.00047 37.2 0.3 61 136-206 59-121 (291)
156 2a01_A Apolipoprotein A-I; fou 27.5 3.1E+02 0.011 26.4 10.1 78 620-698 131-214 (243)
157 1woq_A Inorganic polyphosphate 26.6 46 0.0016 32.7 4.0 45 163-211 114-158 (267)
158 1msz_A DNA-binding protein smu 26.5 42 0.0014 26.9 2.8 27 140-166 34-60 (86)
159 3uul_A Utrophin; spectrin repe 26.5 1.8E+02 0.0061 23.9 7.3 18 624-641 8-25 (118)
160 3epq_A Putative fructokinase; 26.2 1E+02 0.0035 30.9 6.5 48 331-378 224-288 (302)
161 3etw_A Adhesin A; antiparallel 25.6 3.1E+02 0.011 23.3 12.7 59 652-713 48-106 (119)
162 3bex_A Type III pantothenate k 24.9 2.4E+02 0.0082 27.3 8.8 61 136-206 56-134 (249)
163 1saz_A Probable butyrate kinas 24.8 52 0.0018 34.4 4.2 20 2-21 3-22 (381)
164 1sz2_A Glucokinase, glucose ki 23.9 5.5E+02 0.019 25.6 16.9 232 122-378 52-325 (332)
165 4dfe_A 3-oxoacyl-[acyl-carrier 23.9 86 0.0029 31.9 5.6 50 306-358 228-277 (333)
166 3nuw_A 2-OXO-3-deoxygalactonat 23.5 55 0.0019 32.9 3.7 43 333-377 248-290 (295)
167 3mxz_A Tubulin-specific chaper 23.3 3.4E+02 0.012 22.9 8.1 43 647-689 62-106 (116)
168 1u6e_A 3-oxoacyl-[acyl-carrier 22.9 83 0.0028 31.8 5.2 46 309-357 229-274 (335)
169 4am6_A Actin-like protein ARP8 22.8 40 0.0014 37.8 2.8 48 309-356 476-525 (655)
170 1bdg_A Hexokinase; phosphotran 22.7 1.9E+02 0.0064 30.9 8.1 23 193-215 67-89 (451)
171 3cet_A Conserved archaeal prot 21.5 56 0.0019 33.4 3.4 37 3-39 2-43 (334)
172 2dfs_A Myosin-5A; myosin-V, in 21.4 7.6E+02 0.026 29.5 13.8 12 654-665 1007-1018(1080)
173 1ted_A PKS18; thiolase fold, s 21.4 74 0.0025 33.3 4.5 47 309-358 284-330 (393)
174 2f9w_A Pantothenate kinase; CO 21.3 67 0.0023 31.8 3.9 20 2-21 24-44 (271)
175 3cer_A Possible exopolyphospha 20.9 3.6E+02 0.012 27.4 9.6 69 193-278 15-85 (343)
176 1zxo_A Conserved hypothetical 20.2 8.9 0.00031 38.6 -2.9 60 137-206 58-119 (291)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.5e-111 Score=977.08 Aligned_cols=645 Identities=39% Similarity=0.691 Sum_probs=588.7
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHH
Q 004867 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~ 80 (726)
|++||||||||||+||++.+|+++++.|+.|+|.+||+|+|.+++++||..|..+...+|.++++++|||||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHH
Q 004867 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (726)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa 160 (726)
+.+.+++||++++..+|.+.+.+.+.|+.+.++|+++++++|++|+..|+.+++.++.++|||||+||++.||+++++|+
T Consensus 82 ~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa 161 (675)
T 3d2f_A 82 EQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161 (675)
T ss_dssp HHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 99999999999998899999999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceeeechhHHHHHHhhhhcCCCCC--CCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHH
Q 004867 161 TIAGLHPLRLFHETTATALAYGIYKTDLPE--NDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVL 238 (726)
Q Consensus 161 ~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~--~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l 238 (726)
+.|||+++++++||+|||++|++.+..++. ..+.++||||+||||||+|++++.++.++|+++.|+.++||++||+.|
T Consensus 162 ~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l 241 (675)
T 3d2f_A 162 RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAI 241 (675)
T ss_dssp HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHH
Confidence 999999999999999999999987654442 347889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHH
Q 004867 239 FQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPL 318 (726)
Q Consensus 239 ~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i 318 (726)
++|+.++|..++++++..+++++.||+.+||++|+.||.+.++.+.+++++++.++.++|||++|+++|+|+++++..+|
T Consensus 242 ~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i 321 (675)
T 3d2f_A 242 TEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPV 321 (675)
T ss_dssp HHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988889999999899999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhCCCCcccceEEeeecccc
Q 004867 319 EKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPFS 398 (726)
Q Consensus 319 ~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls~~~~~~~~~~~d~~~~~ 398 (726)
+++|+.+++++.+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++||+
T Consensus 322 ~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~s 401 (675)
T 3d2f_A 322 TKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHPYS 401 (675)
T ss_dssp HHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEECSC
T ss_pred HHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeeecc
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred eEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeecccEEEEEEEeccccC-C-CCcceeeEEECCCCCCCcc
Q 004867 399 ISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGTFTVDVQYADVSEL-R-APAKISTYTIGPFQSTKSE 476 (726)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~~~i~~~y~~~~~~-~-~~~~i~~~~i~~~~~~~~~ 476 (726)
||++|.++ . +...+.+||+||+++|++++.+|++..++++.++|++++.+ . +|..||+|.|+|+|+.+.+
T Consensus 402 lgi~~~~~-~-------~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g 473 (675)
T 3d2f_A 402 VSYSWDKQ-V-------EDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQ 473 (675)
T ss_dssp EEEEECCT-T-------CSCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSC
T ss_pred eEeeecCC-C-------CCcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCC
Confidence 99999875 1 12258999999999999999999999999999999888777 4 9999999999999998777
Q ss_pred c-ceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccccCccCCCCCCC
Q 004867 477 R-AKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGTTD 555 (726)
Q Consensus 477 ~-~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 555 (726)
. ++|+|+|.+|.||+|+|+++.++++.+++
T Consensus 474 ~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~------------------------------------------------- 504 (675)
T 3d2f_A 474 DSVPVKLKLRCDPSGLHTIEEAYTIEDIEAG------------------------------------------------- 504 (675)
T ss_dssp SCEEEEEEEEECTTSCEEEEEEEEECC-----------------------------------------------------
T ss_pred CcceEEEEEEEcCCCcEEEEEEEEeeccccc-------------------------------------------------
Confidence 5 59999999999999999998765431100
Q ss_pred CCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhHHHhhHHHHHH
Q 004867 556 APGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAYVY 635 (726)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy 635 (726)
+.|.++++..++|+... .+||++++++|++++.+|..+|+.++++.++||+||+|+|
T Consensus 505 ----------------------~~~~t~~~~~i~i~~~~-~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~ 561 (675)
T 3d2f_A 505 ----------------------SDTKTVKKDDLTIVAHT-FGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIY 561 (675)
T ss_dssp ------------------------CCCCEEEECEEEEEC-SSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------ccccCcceeeEEEecCC-CCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 01455677888888754 3799999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHhhcccHHHHHHHHHHH
Q 004867 636 DMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAYCI 715 (726)
Q Consensus 636 ~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~rp~~~~~~~~~~ 715 (726)
++|++|++.+.++++++++++|...|+++++|||++++++++++|++|+++|+++++||..|+++++.||.+++.|++.|
T Consensus 562 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~~~~ 641 (675)
T 3d2f_A 562 TLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSKQEA 641 (675)
T ss_dssp HHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHHHHH
Confidence 99999986789999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcc
Q 004867 716 NSYREAALSM 725 (726)
Q Consensus 716 ~~~~~~~~~~ 725 (726)
+.++.+++.|
T Consensus 642 ~~~~~~~~~~ 651 (675)
T 3d2f_A 642 SQMAAMAEKL 651 (675)
T ss_dssp ----------
T ss_pred HHHHHHHHHH
Confidence 9999998775
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.8e-99 Score=867.12 Aligned_cols=589 Identities=29% Similarity=0.467 Sum_probs=544.3
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcC-CceeecHhhHhhhhcCccchHHHHHHhhccCCCCHH
Q 004867 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD-KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPE 79 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~ 79 (726)
..+||||||||||+||++.+|.++++.|..|++.+||+|+|.+ +++++|..|..+...+|.++++++|||||+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 1499999999999999999999999999999999999999975 578999999999999999999999999999999999
Q ss_pred HHHhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHH
Q 004867 80 LQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDA 159 (726)
Q Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~A 159 (726)
++...+++||+++..++|.+.+.+ .+ +.++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~--~~--~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEE--CC--EEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 999999999999998888877765 33 68999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeC----CeEEEEEEecCCCccchHHH
Q 004867 160 ATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKK----GQLKILGHSFDRSVGGRDFD 235 (726)
Q Consensus 160 a~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~----~~~~vl~~~~~~~lGG~~iD 235 (726)
++.|||+++++++||+|||++|++.+.. .+.++||||+||||||+|++++.+ +.++++++.|+.++||.+||
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~~----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D 233 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKGT----GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFD 233 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSCC----SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhccC----CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHH
Confidence 9999999999999999999999986542 368999999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCC----cceEEEeCHHHHHHHHhHHH
Q 004867 236 EVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPIL 311 (726)
Q Consensus 236 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~efe~l~~~~~ 311 (726)
+.|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+..+ .++.++|+|++|+++++|++
T Consensus 234 ~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~ 313 (605)
T 4b9q_A 234 SRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLV 313 (605)
T ss_dssp HHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888888876543 67899999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhCCCCcccceEE
Q 004867 312 ERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQV 391 (726)
Q Consensus 312 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls~~~~~~~~~~ 391 (726)
+++..+++++|+.+++...+|+.|+||||+||+|+|+++|+++||.++..+.||++|||+|||++|+.+++. ++++.+
T Consensus 314 ~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l 391 (605)
T 4b9q_A 314 NRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLL 391 (605)
T ss_dssp HHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEE
T ss_pred HHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999876 468999
Q ss_pred eeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeEE
Q 004867 392 NESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYT 466 (726)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~~ 466 (726)
.|++|++||+++.++ .+.+||+||+++|++++.+|++..+ +.|.+ |+|++.+ .+|..||+|.
T Consensus 392 ~dv~p~slgie~~~g------------~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~~n~~lg~~~ 458 (605)
T 4b9q_A 392 LDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAADNKSLGQFN 458 (605)
T ss_dssp ECBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGGGSEEEEEEE
T ss_pred EeeeeeEEEEEEcCC------------EEEEEEeCCCcCCcceEEEeeeecccCceEEEEE-EeccccccccCCEeeEEE
Confidence 999999999999876 6889999999999999999987554 67777 5677766 8999999999
Q ss_pred ECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccccC
Q 004867 467 IGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 546 (726)
Q Consensus 467 i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (726)
|.++|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 459 l~~i~~~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------------ 490 (605)
T 4b9q_A 459 LDGINPAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------------ 490 (605)
T ss_dssp EECCCCCSTTCCCEEEEEEECTTSCEEEEEEE------------------------------------------------
T ss_pred EeCCCCCcCCCceEEEEEEEcCCcEEEEEEEe------------------------------------------------
Confidence 99999999999999999999999999999851
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhHH
Q 004867 547 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 626 (726)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~a 626 (726)
+.++++..++|.... +||+++|++|++++++|..+|++.|++.++
T Consensus 491 ---------------------------------~~tg~~~~i~i~~~~--~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~ 535 (605)
T 4b9q_A 491 ---------------------------------KNSGKEQKITIKASS--GLNEDEIQKMVRDAEANAEADRKCEELVQT 535 (605)
T ss_dssp ---------------------------------TTTCCEECCEEESCC--SCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCcEEEEEecCCC--CCCHHHHHHHHHHhhhhHhhHHHHHHHHHH
Confidence 122344567776554 799999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHh
Q 004867 627 KNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (726)
Q Consensus 627 kN~LEs~iy~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e 700 (726)
||.||+|+|.+|+.|+ ++.+++++++|+++...++++++||+.+ ++++|++++++|++.++||..++++
T Consensus 536 ~n~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 536 RNQGDHLLHSTRKQVE-EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHH-HHGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHH-hhhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999997 5888999999999999999999999976 5899999999999999999988753
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=9.1e-98 Score=856.55 Aligned_cols=587 Identities=29% Similarity=0.477 Sum_probs=539.8
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEc-CCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHH
Q 004867 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFG-DKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~-~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~ 80 (726)
.+||||||||||+||++.+|.++++.|+.|.+.+||+|+|. +++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999999999999999999999999999995 46789999999999999999999999999999999989
Q ss_pred HHhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHH
Q 004867 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (726)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa 160 (726)
+...+++||.++...+|.+.+.+ .| +.++|+++++++|+++++.|+.+++.++.++|||||+||++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~g~~~i~~--~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHCSSCEEECTTSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEECCCCceEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHH
Confidence 98889999999888888887776 44 689999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee----CCeEEEEEEecCCCccchHHHH
Q 004867 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDE 236 (726)
Q Consensus 161 ~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~----~~~~~vl~~~~~~~lGG~~iD~ 236 (726)
+.|||+++++++||+|||++|++.+.. .+.++||||+||||||+|++++. ++.++++++.|+.++||++||+
T Consensus 159 ~~AGl~v~~li~EP~AAAlay~l~~~~----~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 159 RIAGLEVKRIINEPTAAALAYGLDKGT----GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HTTTCEEEEEEEHHHHHHHHTTTTSSS----SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHcCCceEEEecCHHHHHHHhhhcccC----CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 999999999999999999999976531 36889999999999999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCC----cceEEEeCHHHHHHHHhHHHH
Q 004867 237 VLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE----KDVRGFIKRDEFEQISAPILE 312 (726)
Q Consensus 237 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~----~d~~~~itr~efe~l~~~~~~ 312 (726)
.|++|+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++++.++ .++.++|+|++|+++|+|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~ 314 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTG
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998888888876653 567889999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhCCCCcccceEEe
Q 004867 313 RVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVN 392 (726)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls~~~~~~~~~~~ 392 (726)
++..+|+++|+.+++...+|+.|+||||+||+|+|+++|++.||.++..+.||++|||+|||++|+.+++. ++++.+.
T Consensus 315 ~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~ 392 (605)
T 2kho_A 315 RSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLL 392 (605)
T ss_dssp GGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCS
T ss_pred HHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccCceEE
Confidence 99999999999999999999999999999999999999999999889999999999999999999999875 5789999
Q ss_pred eecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeEEE
Q 004867 393 ESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYTI 467 (726)
Q Consensus 393 d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~~i 467 (726)
|++|++||+++.++ .+.+||+||+++|++++.+|++..+ +.|.+ |++++.+ .+|..||+|.|
T Consensus 393 dv~p~slgi~~~~g------------~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v-~~ge~~~~~~n~~lg~~~l 459 (605)
T 2kho_A 393 DVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAADNKSLGQFNL 459 (605)
T ss_dssp BCCCCCEEEEETTT------------EEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEE-EESSCSBGGGSEEEEEEEE
T ss_pred eeeeeeccccccCC------------ceEEEEecccccCccceEEEEecCCCceEEEEEE-EeccCcccccCcEEeEEEe
Confidence 99999999999876 6889999999999999999987543 66777 5666666 88999999999
Q ss_pred CCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccccCc
Q 004867 468 GPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGT 547 (726)
Q Consensus 468 ~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (726)
.++|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 460 ~~i~~~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------------- 490 (605)
T 2kho_A 460 DGINPAPRGMPQIEVTFDIDADGILHVSAKD------------------------------------------------- 490 (605)
T ss_dssp ECCCSCCTTCSCEEEEEEECTTSCEEEEEEE-------------------------------------------------
T ss_pred cCCCCCCCCCcEEEEEEEEcCCCceeEEEEE-------------------------------------------------
Confidence 9999988888999999999999999999851
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhHHH
Q 004867 548 ADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRK 627 (726)
Q Consensus 548 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~ak 627 (726)
+.+++...++|+.. .+||++++++|++++++|..+|+..+++.++|
T Consensus 491 --------------------------------~~tg~~~~i~i~~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~ 536 (605)
T 2kho_A 491 --------------------------------KNSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFDELVQTR 536 (605)
T ss_dssp --------------------------------TTTCCEEEEEECTT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred --------------------------------cCCCceeecccccc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 11223456677655 48999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHH
Q 004867 628 NAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYK 699 (726)
Q Consensus 628 N~LEs~iy~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~ 699 (726)
|+||+|+|++|+.|++ +.+++++++|+++.+.++++++||+.+ ++++|++++++|+++++||..|++
T Consensus 537 n~~e~~~~~~~~~l~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~ 603 (605)
T 2kho_A 537 NQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQ 603 (605)
T ss_dssp HHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999975 889999999999999999999999954 889999999999999999999875
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=2e-91 Score=796.59 Aligned_cols=541 Identities=33% Similarity=0.573 Sum_probs=499.8
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHHH
Q 004867 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQ 81 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~~ 81 (726)
.+||||||||||+||++.+|+++++.|+.|++.+||+|+|.+++++||..|+.+...+|.++++++|||||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHHH
Q 004867 82 RDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAAT 161 (726)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa~ 161 (726)
..++++||.++.. +|.+.+.+.+.+..+.++|+++++++|++|++.|+.+++.++.++|||||++|++.||+++++|++
T Consensus 85 ~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~A~~ 163 (554)
T 1yuw_A 85 SDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGT 163 (554)
T ss_dssp HHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 9999999999854 788889999988888999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHH
Q 004867 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (726)
Q Consensus 162 ~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 241 (726)
.||++++++++||+|||++|++.+.. ..+.++||||+||||||+|++++.++.++++++.++.++||++||+.|++|
T Consensus 164 ~AGl~~~~li~EP~AAAlay~~~~~~---~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 240 (554)
T 1yuw_A 164 IAGLNVLRIINEPTAAAIAYGLDKKV---GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNH 240 (554)
T ss_dssp TTTCEEEEEEEHHHHHHHHTTCSTTC---SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEeCcHHHHHHHHHhhccC---CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999876532 136889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHHH
Q 004867 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKA 321 (726)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~ 321 (726)
+.++|..+++.++..+++++.+|+.+||++|+.||....+.+.+++++++.++...|+|++|+++++|+++++..+|+++
T Consensus 241 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~ 320 (554)
T 1yuw_A 241 FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKA 320 (554)
T ss_dssp HHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999998999999999999999999999999999999999
Q ss_pred HHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcC-CCCCCCCCchhhhhcchHHHHHHhCC--CCcccceEEeeecccc
Q 004867 322 LAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEPRRTMNASECVARGCALQCAILSP--TFKVREFQVNESFPFS 398 (726)
Q Consensus 322 l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg-~~v~~~~n~~eaVa~GAa~~aa~ls~--~~~~~~~~~~d~~~~~ 398 (726)
|+.+++...+|+.|+|+||+||+|+|+++|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+.|++|++
T Consensus 321 L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~s 400 (554)
T 1yuw_A 321 LRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLS 400 (554)
T ss_dssp HHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSC
T ss_pred HHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeE
Confidence 99999999999999999999999999999999996 78889999999999999999999987 4667899999999999
Q ss_pred eEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeecc----cEEEEEEEeccccC-CCCcceeeEEECCCCCC
Q 004867 399 ISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSG----TFTVDVQYADVSEL-RAPAKISTYTIGPFQST 473 (726)
Q Consensus 399 i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~----~~~i~~~y~~~~~~-~~~~~i~~~~i~~~~~~ 473 (726)
||+++.++ .+.+||+||+++|.+++.+|.+.. .+.|.+ |+++..+ .+|..||+|.|.++|+.
T Consensus 401 lgi~~~~g------------~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v-~~ge~~~~~~n~~lg~~~l~~i~~~ 467 (554)
T 1yuw_A 401 LGIETAGG------------VMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQV-YEGERAMTKDNNLLGKFELTGIPPA 467 (554)
T ss_dssp EEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEE-EESSSSBGGGSEEEEEEEEECCCCC
T ss_pred EEEEecCc------------eEEEEEECCCccCceeEEEeeeccCCCceEEEEE-EecCccccccCcEEEEEEEeCCCCC
Confidence 99999875 688999999999999998888743 367777 5566666 88999999999999999
Q ss_pred CcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccccCccCCCCC
Q 004867 474 KSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQGT 553 (726)
Q Consensus 474 ~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (726)
+.|.++|+|+|.+|.||+|+|++.+
T Consensus 468 ~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------------------- 492 (554)
T 1yuw_A 468 PRGVPQIEVTFDIDANGILNVSAVD------------------------------------------------------- 492 (554)
T ss_dssp STTCCCEEEEEEECTTCCEEEEEEE-------------------------------------------------------
T ss_pred cccccEEEEEEEEccCceEEEEEEe-------------------------------------------------------
Confidence 8888999999999999999999851
Q ss_pred CCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhHHHhhHHHH
Q 004867 554 TDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAY 633 (726)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~ 633 (726)
+.++++..++|+... .+||++++++|++++++|+.+|+.++++.++||+||+|
T Consensus 493 --------------------------~~tg~~~~~~i~~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~ 545 (554)
T 1yuw_A 493 --------------------------KSTGKENKITITNDK-GRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESY 545 (554)
T ss_dssp --------------------------TTTCCEEEEEECCCS-SCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSC
T ss_pred --------------------------ccCCCceeEEEecCC-CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHH
Confidence 111234456776543 47999999999999999999999999999999999999
Q ss_pred HHHHHHHh
Q 004867 634 VYDMRNKL 641 (726)
Q Consensus 634 iy~~r~~l 641 (726)
+|++|++|
T Consensus 546 ~~~~~~~l 553 (554)
T 1yuw_A 546 AFNMKATV 553 (554)
T ss_dssp CSCSCCCC
T ss_pred HHHHHHhh
Confidence 99998776
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=2.5e-81 Score=708.16 Aligned_cols=498 Identities=29% Similarity=0.502 Sum_probs=447.7
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHHH
Q 004867 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQ 81 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~~ 81 (726)
.+||||||||||+||++.+|.++++.|+.|.+.+||+|+|.+++++||..|..+...+| ++++++||+||+++.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 48999999999999999999999999999999999999998788999999999999999 999999999998432
Q ss_pred HhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHHH
Q 004867 82 RDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAAT 161 (726)
Q Consensus 82 ~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa~ 161 (726)
+ ...| ..++|+++++++|++|+..++.+++.++..+|||||++|++.||+++++|++
T Consensus 77 ---------~------------~~~g--~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~ 133 (509)
T 2v7y_A 77 ---------V------------EIEG--KQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGR 133 (509)
T ss_dssp ---------E------------EETT--EEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHH
T ss_pred ---------E------------EECC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 1 1123 4688999999999999999999999999999999999999999999999999
Q ss_pred HhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHH
Q 004867 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (726)
Q Consensus 162 ~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 241 (726)
.||++++++++||+|||++|++... .+.++||||+||||||++++++.++.++++++.++.++||.+||+.|++|
T Consensus 134 ~AGl~~~~li~Ep~AAAlay~~~~~-----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 134 IAGLEVERIINEPTAAALAYGLDKE-----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp HTTCEEEEEEEHHHHHHHHTTGGGS-----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HcCCCeEEEecCHHHHHHHHhhccC-----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 9999999999999999999998653 36899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccC---C-cceEEEeCHHHHHHHHhHHHHHHHHH
Q 004867 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLME---E-KDVRGFIKRDEFEQISAPILERVKRP 317 (726)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~efe~l~~~~~~~i~~~ 317 (726)
+.++|+.+++.++..+++++.+|+.+||++|+.||....+.+.++.+.+ | .++.++|+|++|+++++|+++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 9999999999999889999999999999999999999888888887654 2 46788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhCCCCcccceEEeeeccc
Q 004867 318 LEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNESFPF 397 (726)
Q Consensus 318 i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls~~~~~~~~~~~d~~~~ 397 (726)
++++|+.+++...+|+.|+|+||+|++|+|+++|++.||.++..+.||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~ 366 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPL 366 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSS
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEEeecc
Confidence 999999999998999999999999999999999999999888999999999999999999999875 568899999999
Q ss_pred ceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeEEECCCCC
Q 004867 398 SISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYTIGPFQS 472 (726)
Q Consensus 398 ~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~~i~~~~~ 472 (726)
+||+++.++ .+.+||+||+++|++++.+|.+..+ +.|.+ |+++..+ .+|..||+|.|.++|+
T Consensus 367 slgi~~~~~------------~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v-~~ge~~~~~~~~~lg~~~l~~i~~ 433 (509)
T 2v7y_A 367 SLGIETMGG------------VFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHV-LQGERPMAADNKSLGRFQLTGIPP 433 (509)
T ss_dssp EEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEE-EEESSSBGGGSEEEEEEEEECCCC
T ss_pred ccceeecCC------------ceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEE-EecCccccccCcEEEEEEEeCCCC
Confidence 999999876 6889999999999999998877443 67777 4566666 8899999999999999
Q ss_pred CCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccccCccCCCC
Q 004867 473 TKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKGTADAQG 552 (726)
Q Consensus 473 ~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (726)
.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 434 ~~~g~~~i~v~f~id~~gil~v~a~~------------------------------------------------------ 459 (509)
T 2v7y_A 434 APRGVPQIEVTFDIDANGIVHVRAKD------------------------------------------------------ 459 (509)
T ss_dssp CCTTCSCEEEEEEECTTSCEEEEEEE------------------------------------------------------
T ss_pred CCCcccEEEEEEEEcCCceEEEEEEE------------------------------------------------------
Confidence 88888899999999999999999851
Q ss_pred CCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhHHHhhHH
Q 004867 553 TTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVE 631 (726)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LE 631 (726)
+.++++..++|+.. .+||++++++|++++++|+.+|+..+++.++||+||
T Consensus 460 ---------------------------~~~g~~~~~~i~~~--~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 460 ---------------------------LGTNKEQSITIKSS--SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp ---------------------------TTTCCEEEEEECSS--CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred ---------------------------cCCCcEEEEEEEec--CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 11223455677655 479999999999999999999999999999999997
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=8.6e-65 Score=559.31 Aligned_cols=380 Identities=39% Similarity=0.658 Sum_probs=360.9
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHH
Q 004867 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~ 80 (726)
|.+||||||||||+||++.++.++++.|+.|++++||+|+|.+++++||..|..+...+|.++++++||++|+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHH
Q 004867 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (726)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa 160 (726)
+...+.+||.+.. .+|...+.+.+.++...++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 103 ~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~ 181 (404)
T 3i33_A 103 QSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 181 (404)
T ss_dssp HHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 9999999999987 578889999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHH
Q 004867 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQ 240 (726)
Q Consensus 161 ~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~ 240 (726)
+.||++++.+++||+|||++|+..... ....+..++|||+||||||++++++.++.++++++.++..+||.+||+.|++
T Consensus 182 ~~AGl~~~~li~Ep~AAa~~~~~~~~~-~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~ 260 (404)
T 3i33_A 182 TITGLNVLRIINEPTAAAIAYGLDKKG-CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVS 260 (404)
T ss_dssp HHHTCEEEEEEEHHHHHHHHTTTTSSC-SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHH
T ss_pred HHcCCCeEEEeccHHHHHHHHHhhccc-ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHH
Confidence 999999999999999999999876541 1114788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHH
Q 004867 241 HFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEK 320 (726)
Q Consensus 241 ~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~ 320 (726)
++.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.++++.++.+.|+|++|+++++++++++..+|.+
T Consensus 261 ~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~ 340 (404)
T 3i33_A 261 HLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEK 340 (404)
T ss_dssp HHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHH
T ss_pred HHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred HHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc-CCCCCCCCCchhhhhcchHHHHHHhCC
Q 004867 321 ALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILSP 382 (726)
Q Consensus 321 ~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f-g~~v~~~~n~~eaVa~GAa~~aa~ls~ 382 (726)
+|+.+++...+|+.|+|+||+|++|+|+++|++.| +.++..+.||++|||+|||++|+++++
T Consensus 341 ~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 341 ALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 99999999899999999999999999999999999 688889999999999999999999874
No 7
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2.3e-63 Score=546.23 Aligned_cols=374 Identities=37% Similarity=0.655 Sum_probs=358.0
Q ss_pred EEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHHHH
Q 004867 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (726)
Q Consensus 3 vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~~~ 82 (726)
+||||||||||++|++.++.++++.|+.|++++||+|+|.++++++|..|..+...+|.++++++|+++|+.++++.++.
T Consensus 20 viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~~ 99 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQK 99 (394)
T ss_dssp CEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHHH
T ss_pred EEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHHHH
Q 004867 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATI 162 (726)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa~~ 162 (726)
..+++||.+. ..+|...+.+.+.++.+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|++.
T Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 178 (394)
T 3qfu_A 100 DIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAGTI 178 (394)
T ss_dssp HHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHHHH
Confidence 9999999998 567888898888888899999999999999999999999999999999999999999999999999999
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHH
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHF 242 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l 242 (726)
||++++.+++||+|||++|++.... .+.+++|||+||||||++++++.++.++++++.++.++||.+||+.|++++
T Consensus 179 aGl~~~~li~Ep~Aaa~~~~~~~~~----~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l 254 (394)
T 3qfu_A 179 AGLNVLRIVNEPTAAAIAYGLDKSD----KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQL 254 (394)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSCS----SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHHhhccCC----CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999876532 468899999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHHHH
Q 004867 243 AAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKAL 322 (726)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l 322 (726)
.++|..+++.++..+++.+.+|+.+||++|+.||......+.++.+.++.++.+.++|++|+++++++++++..+|.++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l 334 (394)
T 3qfu_A 255 IKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVL 334 (394)
T ss_dssp HHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred HHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc-CCCCCCCCCchhhhhcchHHHHHHhC
Q 004867 323 AETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPRRTMNASECVARGCALQCAILS 381 (726)
Q Consensus 323 ~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f-g~~v~~~~n~~eaVa~GAa~~aa~ls 381 (726)
+.+++...+|+.|+|+||+|++|+|+++|++.| +.++..+.||++|||+|||++|++++
T Consensus 335 ~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 335 QDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 999999889999999999999999999999999 78899999999999999999999875
No 8
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.6e-63 Score=548.13 Aligned_cols=378 Identities=26% Similarity=0.408 Sum_probs=344.4
Q ss_pred CeEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHH
Q 004867 1 MSVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~ 80 (726)
|.+||||||||||+||++.++.++++.|+.|.+++||+|+|.++++++|..|..+..++|.+++.++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 46899999999999999988999999999999999999999999999999999999999999999999999999877654
Q ss_pred HHhhccCCceEEeCCCCceEEEEEEc----CceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHH
Q 004867 81 QRDLKSLPFAVTEGPDGYPLIHARYL----GETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAV 156 (726)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~----~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l 156 (726)
+.. ..++.+.. .+|.+.+.+... +..+.++|+++++++|++|++.++.+++.++.++|||||++|++.||+++
T Consensus 93 ~~~--~~~~~~~~-~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THN--HASAHPQE-AGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGG--TTSCCCEE-ETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhh--ccccceec-CCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 433 33444433 478888887765 35689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHH
Q 004867 157 IDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDE 236 (726)
Q Consensus 157 ~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~ 236 (726)
++|++.|||+++.+++||+|||++|+...... ..+.++||||+||||||++++++.++.++++++.++..+||.+||+
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~--~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 247 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEAT--ISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDK 247 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC--------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccC--CCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHH
Confidence 99999999999999999999999998754211 2478999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc--cCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHH
Q 004867 237 VLFQHFAAKFKEEYK--IDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERV 314 (726)
Q Consensus 237 ~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i 314 (726)
.|++++..+|..+++ .++..+++.+.+|+.+||++|+.||.+..+.+.++.+.++.++...|+|++|+++++|+++++
T Consensus 248 ~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i 327 (409)
T 4gni_A 248 VLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGF 327 (409)
T ss_dssp HHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHH
Confidence 999999999999988 888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC--C------CCCCCchhhhhcchHHHHHHhCCC
Q 004867 315 KRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE--P------RRTMNASECVARGCALQCAILSPT 383 (726)
Q Consensus 315 ~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~--v------~~~~n~~eaVa~GAa~~aa~ls~~ 383 (726)
..+|+++|+.+++...+|+.|+|+||+|++|+|+++|++.||.+ + ....||++|||+|||++|+.....
T Consensus 328 ~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 328 NRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999899999999999999999999999999865 3 678999999999999999987654
No 9
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2.7e-61 Score=527.58 Aligned_cols=372 Identities=34% Similarity=0.577 Sum_probs=342.6
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcC-CceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHH
Q 004867 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGD-KQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPEL 80 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~-~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~ 80 (726)
.+||||||||||+||++.+|.++++.|+.|.+.+||+|+|.. ++++||..|..+...+|.++++++|++||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999964 6689999999999999999999999999999999989
Q ss_pred HHhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHH
Q 004867 81 QRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAA 160 (726)
Q Consensus 81 ~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa 160 (726)
+...+.+||.+....+|.+.+.+ .| +.++|+++++++|+++++.++.+++.++..+|||||++|++.||+++++|+
T Consensus 83 ~~~~~~~p~~~~~~~~~~~~~~~--~g--~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 158 (383)
T 1dkg_D 83 QRDVSIMPFKIIAADNGDAWVEV--KG--QKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158 (383)
T ss_dssp HHHTTTCSSEEEECSSSBEEEEE--TT--EEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEcCCCcEEEEE--CC--EEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 88888999999888888877765 44 589999999999999999999999988999999999999999999999999
Q ss_pred HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee----CCeEEEEEEecCCCccchHHHH
Q 004867 161 TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK----KGQLKILGHSFDRSVGGRDFDE 236 (726)
Q Consensus 161 ~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~----~~~~~vl~~~~~~~lGG~~iD~ 236 (726)
+.||++++.+++||+|||++|++... ..+.++||||+||||||++++++. ++.++++++.++..+||++||+
T Consensus 159 ~~aGl~~~~li~Ep~Aaa~~~~~~~~----~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 159 RIAGLEVKRIINEPTAAALAYGLDKG----TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHTTCEESCCCBHHHHHHHHHTCCC-----CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHcCCceEEEeccHHHHHHHHHhccC----CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999987542 136789999999999999999998 5788999998899999999999
Q ss_pred HHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccC---C-cceEEEeCHHHHHHHHhHHHH
Q 004867 237 VLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLME---E-KDVRGFIKRDEFEQISAPILE 312 (726)
Q Consensus 237 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~---~-~d~~~~itr~efe~l~~~~~~ 312 (726)
.|++++.++|..+++.++..+++.+.+|+..||++|+.|+......+.++.+.+ | .++.+.|+|++|+++++|+++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~ 314 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVN 314 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHH
Confidence 999999999999999888889999999999999999999998888888876554 2 456789999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhC
Q 004867 313 RVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (726)
Q Consensus 313 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls 381 (726)
++..+++++|+.+++...+|+.|+|+||+|++|+|+++|++.|+.++..+.||++|||+|||++|++++
T Consensus 315 ~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 315 RSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 999999999999999888999999999999999999999999998898999999999999999998764
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=7e-41 Score=360.42 Aligned_cols=309 Identities=19% Similarity=0.282 Sum_probs=240.8
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCC--ce-eecHhhHhhhhcCccchHHHHHHhhccCCCCH
Q 004867 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDK--QR-FIGTAGAASSTMNPKNSISQIKRLIGRQFSDP 78 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~--~~-~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~ 78 (726)
.+|||||||+||++++..++ ++.+ +||+|+|..+ .+ ++|.+|+.+..++|.++..
T Consensus 4 ~~igIDlGT~~s~v~~~~~~---~~~~------~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~------------- 61 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG---IVVN------EPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA------------- 61 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE---EEEE------EESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-------------
T ss_pred ceEEEEcCcCcEEEEECCCC---EEEe------eCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-------------
Confidence 58999999999999875332 2332 7999999865 34 7999998776666655310
Q ss_pred HHHHhhccCCceEEeCCCCceEEEEEEcCceeEE-cHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHH
Q 004867 79 ELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVF-TPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVI 157 (726)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~-~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~ 157 (726)
.+|+ .+|.+ ..+ .++++++++|++++.. ..++ ...+|||||++|++.||++++
T Consensus 62 -------~~p~-----~~g~i----------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 62 -------IRPM-----RDGVI----------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------ECCE-----ETTEE----------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred -------EecC-----CCCee----------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 0121 12321 112 3567777777666542 1233 478999999999999999999
Q ss_pred HHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHH
Q 004867 158 DAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEV 237 (726)
Q Consensus 158 ~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~ 237 (726)
+|++.||++++.+++||+|||++|+.... .+.+++|||+||||||+++++... ++ ..++..+||++||+.
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~-----~~~~~lVvDiGggttdvsv~~~~~----~~-~~~~~~lGG~~id~~ 185 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVE-----EPSGNMVVDIGGGTTEVAVISLGS----IV-TWESIRIAGDEMDEA 185 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTT-----SSSCEEEEEECSSCEEEEEEETTE----EE-EEEEESCSHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCC-----CCceEEEEEeCCCeEEEEEEEcCC----EE-eeCCCCccChhHHHH
Confidence 99999999999999999999999986432 467899999999999999998753 22 235789999999999
Q ss_pred HHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCc------ccEEec--cccCCcceEEEeCHHHHHHHHhH
Q 004867 238 LFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPE------APLNIE--CLMEEKDVRGFIKRDEFEQISAP 309 (726)
Q Consensus 238 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~------~~i~i~--~l~~~~d~~~~itr~efe~l~~~ 309 (726)
|++++.+++ +.++. +..||++|+.|+.... ..+.+. .+.++.++.++|+|++|+++++|
T Consensus 186 l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~ 252 (344)
T 1jce_A 186 IVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRS 252 (344)
T ss_dssp HHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHH
Confidence 999998764 33332 3789999999987643 234443 44567778899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCc-cEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhC
Q 004867 310 ILERVKRPLEKALAETGLS--VEDV-HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILS 381 (726)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls 381 (726)
+++++.++|.++|+.++.. .+.+ +.|+|+||+|++|.|+++|++.|+.++....||++|||+||+++++.++
T Consensus 253 ~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 253 VVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999999987532 1234 6899999999999999999999998888888999999999999998654
No 11
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=8.6e-34 Score=280.74 Aligned_cols=210 Identities=19% Similarity=0.274 Sum_probs=189.5
Q ss_pred EEeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceee
Q 004867 390 QVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKIST 464 (726)
Q Consensus 390 ~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~ 464 (726)
++.|++|++|||++.+| .+.+|||||++||++++.+|++..+ +.|.+ |+|++.+ .+|.+||+
T Consensus 2 ~l~DV~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~dn~~Lg~ 68 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHV-LQGERKRAADNKSLGQ 68 (219)
T ss_dssp CCCCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGGGSEEEEE
T ss_pred eEEEecCcEEEEEEeCC------------EEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEE-EEcCCcccccCCEEEE
Confidence 57899999999999886 6899999999999999999988654 77887 7788877 99999999
Q ss_pred EEECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccc
Q 004867 465 YTIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDA 544 (726)
Q Consensus 465 ~~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (726)
|.|.|+||++.|.++|+|+|.+|.||+|+|++.+
T Consensus 69 f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d---------------------------------------------- 102 (219)
T 4e81_A 69 FNLDGINPAPRGMPQIEVTFDIDADGILHVSAKD---------------------------------------------- 102 (219)
T ss_dssp EEEECCCCCSTTCSCEEEEEEECTTCCEEEEEEE----------------------------------------------
T ss_pred EEEeCCCCCCCCCceEEEEEEeCCCCCEeeeeec----------------------------------------------
Confidence 9999999999999999999999999999999951
Q ss_pred cCccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhh
Q 004867 545 KGTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETK 624 (726)
Q Consensus 545 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~ 624 (726)
+.++++..++|.... +||+++|++|++++++|+.+|+..|++.
T Consensus 103 -----------------------------------~~tg~~~~i~I~~~~--~Ls~eeI~~m~~~a~~~~~eD~~~r~~~ 145 (219)
T 4e81_A 103 -----------------------------------KNSGKEQKITIKASS--GLNEDEIQKMVRDAEANAEADRKFEELV 145 (219)
T ss_dssp -----------------------------------TTTCCEEEEEECTTC--SCCHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred -----------------------------------cccCccceEeeeccc--cccHHHHHHHHHHHHHhhhccHHHHHHH
Confidence 233456678886543 7999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHh
Q 004867 625 DRKNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (726)
Q Consensus 625 ~akN~LEs~iy~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e 700 (726)
++||.||+|+|.+|+.|.+ +.+++++++|++|.+.+.++++||+++ ++++|++++++|++.++||..|++.
T Consensus 146 e~kn~le~~i~~~~~~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 146 QTRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHH-hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999974 888999999999999999999999986 7899999999999999999998876
No 12
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=100.00 E-value=9.6e-32 Score=268.93 Aligned_cols=210 Identities=15% Similarity=0.258 Sum_probs=184.4
Q ss_pred eeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeEE
Q 004867 392 NESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTYT 466 (726)
Q Consensus 392 ~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~~ 466 (726)
.|++||+|||++.++ .+.+|||||++||++++.+|++..+ +.|.++ +|++.+ .+|.+||+|.
T Consensus 1 ~Dv~p~slGie~~~g------------~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~-qGe~~~~~~n~~Lg~f~ 67 (227)
T 1u00_A 1 MDVIPLSLGLETMGG------------LVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVM-QGERELVQDCRSLARFA 67 (227)
T ss_dssp CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEE-ECSSSBGGGSEEEEEEE
T ss_pred CCcccceEEEEEeCC------------EEEEEEeCcCccCceEEEEEEecCCCceEEEEEEE-ecCCccCCCCCEEEEEE
Confidence 489999999999876 6889999999999999999987554 788885 566666 8899999999
Q ss_pred ECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCccccccccccC
Q 004867 467 IGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAKG 546 (726)
Q Consensus 467 i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 546 (726)
|.|+|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 68 l~gi~~~p~G~~~I~Vtf~iD~nGiL~V~a~d------------------------------------------------ 99 (227)
T 1u00_A 68 LRGIPALPAGGAHIRVTFQVDADGLLSVTAME------------------------------------------------ 99 (227)
T ss_dssp ECCCCCCSTTCSCEEEEEEECTTCCEEEEEEE------------------------------------------------
T ss_pred EeCCCCCCCCceEEEEEEEECCCCcEEEEeec------------------------------------------------
Confidence 99999998888899999999999999998851
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhHH
Q 004867 547 TADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKDR 626 (726)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~a 626 (726)
+.++++..++|... .+||++++++|++++.+|+.+|+..+++.++
T Consensus 100 ---------------------------------~~tg~~~~i~i~~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~ 144 (227)
T 1u00_A 100 ---------------------------------KSTGVEASIQVKPS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQ 144 (227)
T ss_dssp ---------------------------------TTTCCEEEEEECCC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccceEEEEec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHH
Confidence 11123456777655 3699999999999999999999999999999
Q ss_pred HhhHHHHHHHHHHHhhhhhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHhhc
Q 004867 627 KNAVEAYVYDMRNKLCDKYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEFT 702 (726)
Q Consensus 627 kN~LEs~iy~~r~~l~~~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~ 702 (726)
||.||+|||.+|+.|.+ +.+++++++|++|...|+++++|||.+ ++++|++++++|+++++||..|++...
T Consensus 145 kn~le~~i~~~~~~l~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 145 KVEAARVLESLHGALAA-DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999975 788999999999999999999999954 589999999999999999999876433
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.95 E-value=2.2e-28 Score=262.10 Aligned_cols=227 Identities=17% Similarity=0.157 Sum_probs=169.0
Q ss_pred EcHHHHHHHHHHHHHHHHHHhcCCCcCcEE--EEecCCCCHHHHHHHHHHHHHh--------C------CCceeeechhH
Q 004867 112 FTPTQVLGMLLSNLKAIAESNLNAAVVDCC--IGIPVYFTDLQRRAVIDAATIA--------G------LHPLRLFHETT 175 (726)
Q Consensus 112 ~~~eel~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~f~~~qR~~l~~Aa~~A--------G------l~~~~li~Ep~ 175 (726)
+..+....+++..|+..++...+.+ .++| |+||++|+..||+++++++..+ | +..+++++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3445566777777766542222223 5699 9999999999999999997765 4 35688999999
Q ss_pred HHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhcc--C
Q 004867 176 ATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKI--D 253 (726)
Q Consensus 176 AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~--~ 253 (726)
|||++| +...... ....+++|||+||||||++++++.++. .+.++.++.++||.+|++.|++++.++ |+. .
T Consensus 174 AAa~~~-l~~~~~~-~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~----~g~~~~ 246 (346)
T 2fsj_A 174 GAALYL-LNQGIIE-QQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKE----TGFVVP 246 (346)
T ss_dssp HHHHHH-HHHTSSC-CCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH----HCCCCC
T ss_pred HHHHHh-hcccccc-ccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHH----hCCCcC
Confidence 999998 3322111 124779999999999999999987776 455545688999999999999877655 455 3
Q ss_pred ccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHH-HHHHhHHHHHHHHHHHHHHHHcCCCCCCc
Q 004867 254 VSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEF-EQISAPILERVKRPLEKALAETGLSVEDV 332 (726)
Q Consensus 254 ~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l~~~~~~~~~i 332 (726)
+.. ..++ ....+.+ .+. .++++++ +++++++++++.+.|++.|+.+ .+++
T Consensus 247 i~~---------~~~e---------~~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~i 297 (346)
T 2fsj_A 247 FDL---------AQEA---------LSHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDRV 297 (346)
T ss_dssp HHH---------HHHH---------TTSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGGE
T ss_pred CCH---------HHHh---------cCCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcc
Confidence 321 1222 1112333 232 3569999 9999999999999999999876 4578
Q ss_pred cEEEEEcCCCChHHHHHHHHHHcCCCCCC---CCCchhhhhcchHHHHH
Q 004867 333 HMVEVVGSSSRVPAIIKILTEFFGKEPRR---TMNASECVARGCALQCA 378 (726)
Q Consensus 333 ~~ViLvGG~srip~v~~~l~~~fg~~v~~---~~n~~eaVa~GAa~~aa 378 (726)
+.|+|+||++++ +++.|++.|+. +.. ..||++|+|+|+..++.
T Consensus 298 ~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 298 TSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred cEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 999999999999 99999999973 333 67999999999998764
No 14
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.95 E-value=1.8e-27 Score=259.14 Aligned_cols=306 Identities=16% Similarity=0.189 Sum_probs=200.4
Q ss_pred EEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHHHH
Q 004867 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (726)
Q Consensus 3 vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~~~ 82 (726)
++|||+||++++++++.++++.+ +..|...+||.+. ......++..+...+|+++++.-
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~~------- 73 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEAR------- 73 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHHT-------
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHcC-------
Confidence 68999999999999887665444 3344555565321 22244678888999999998511
Q ss_pred hhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHH----------
Q 004867 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQ---------- 152 (726)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~q---------- 152 (726)
.+ ...-.+..+...+.... .. ...++++++-.. ++..++.+++.++.+++|.+|. .+.+
T Consensus 74 -~~-~~~v~~~i~~~~~~~~~-~~--~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~~ 142 (377)
T 2ych_A 74 -TR-KRYVVTALSNLAVILRP-IQ--VPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQVQ 142 (377)
T ss_dssp -CC-CCEEEEEECGGGCEEEE-EE--EECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEEE
T ss_pred -CC-cceEEEEecCCcEEEEE-EE--CCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEE--eCCCCCCCCcceeE
Confidence 00 00001122222222111 11 135777777653 3456778888899999999983 3322
Q ss_pred ----------HHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEE
Q 004867 153 ----------RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILG 222 (726)
Q Consensus 153 ----------R~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~ 222 (726)
.+++++|++.||+++..++.||+|||++|+..... ..+..++|||+||||||+++++. +.+ +.
T Consensus 143 v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~---~~~~~~~vvDiGggttdi~i~~~--g~~--~~ 215 (377)
T 2ych_A 143 VMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE---EPDRVFLVLDIGAESTSLVLLRG--DKP--LA 215 (377)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT---STTCEEEEEEECSSCEEEEEEET--TEE--EE
T ss_pred EEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc---ccCCeEEEEEECCCcEEEEEEEC--CEE--EE
Confidence 38899999999999999999999999998754321 13567999999999999999864 332 22
Q ss_pred EecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHH
Q 004867 223 HSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDE 302 (726)
Q Consensus 223 ~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~e 302 (726)
.++..+||.+||+.|++. ++++ +..||++|+.++............++-.+....++|++
T Consensus 216 -~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~ 275 (377)
T 2ych_A 216 -VRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGR 275 (377)
T ss_dssp -EEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-------------------------C
T ss_pred -EEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccccccccccCCHHH
Confidence 347899999999999873 3332 36899999999754322111110011112345789999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHc--CCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhh
Q 004867 303 FEQISAPILERVKRPLEKALAET--GLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASEC 368 (726)
Q Consensus 303 fe~l~~~~~~~i~~~i~~~l~~~--~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~ea 368 (726)
|++++++.++++...|++.|+.. +.....++.|+|+||+|++|.|++.+++.|+.++... ||+++
T Consensus 276 ~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~-~P~~~ 342 (377)
T 2ych_A 276 IYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPV-NPWEA 342 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEEC-CGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEec-Cchhh
Confidence 99999999999999999999863 5566689999999999999999999999998655433 44443
No 15
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.94 E-value=1.4e-26 Score=221.26 Aligned_cols=159 Identities=19% Similarity=0.312 Sum_probs=137.4
Q ss_pred cceEEeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcc
Q 004867 387 REFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAK 461 (726)
Q Consensus 387 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~ 461 (726)
..+.+.|++|++||++|.++ .+.+|||||++||++++.+|++..+ +.|.+ |+|++.+ .+|.+
T Consensus 18 ~~f~l~DV~P~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~V-yqGE~~~~~dn~~ 84 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLGG------------VFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKV-CQGEREMAGDNKL 84 (182)
T ss_dssp ------CBCSSCEEEECTTS------------BEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGGGSEE
T ss_pred CCEEEEEecCCEEEEEEeCC------------EEEEEEeCCCccCEEEEEEEEECCCCccEEEEEE-EEcCccccccCce
Confidence 36889999999999999876 6899999999999999999988665 77888 7888877 89999
Q ss_pred eeeEEECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCcccccc
Q 004867 462 ISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNM 541 (726)
Q Consensus 462 i~~~~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 541 (726)
||+|.|.|+|+++.|.++|+|+|.+|.||+|+|++.+
T Consensus 85 LG~f~l~gipp~p~G~~~IeVtf~iD~nGiL~VsA~d------------------------------------------- 121 (182)
T 3n8e_A 85 LGQFTLIGIPPAPRGVPQIEVTFDIDANGIVHVSAKD------------------------------------------- 121 (182)
T ss_dssp EEEEEECCCCCCCTTCSCEEEEEEECTTCCEEEEEEE-------------------------------------------
T ss_pred EEEEEEcCCCCCCCCCeeEEEEEEEecCCEEEEEEEE-------------------------------------------
Confidence 9999999999999899999999999999999999851
Q ss_pred ccccCccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHH
Q 004867 542 QDAKGTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVME 621 (726)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~ 621 (726)
+.++++..++|... .+||+++|++|++++++|+.+|++.+
T Consensus 122 --------------------------------------~~tg~~~~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~ 161 (182)
T 3n8e_A 122 --------------------------------------KGTGREQQIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKK 161 (182)
T ss_dssp --------------------------------------TTTCCEEEEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHH
T ss_pred --------------------------------------cCCCCEeeEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHH
Confidence 23345567888765 48999999999999999999999999
Q ss_pred HhhHHHhhHHHHHHHHHHHh
Q 004867 622 ETKDRKNAVEAYVYDMRNKL 641 (726)
Q Consensus 622 ~~~~akN~LEs~iy~~r~~l 641 (726)
++.++||.||+|+|.+|++|
T Consensus 162 ~~~e~kn~le~~iy~~~~~l 181 (182)
T 3n8e_A 162 ERVEAVNMAEGIIHDTETKM 181 (182)
T ss_dssp HHHHHHHHHHHHHHCCSCCC
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999998766
No 16
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.93 E-value=1.6e-25 Score=232.38 Aligned_cols=202 Identities=24% Similarity=0.323 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcCcEEEEecCCCCHHHHHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCce
Q 004867 116 QVLGMLLSNLKAIAESNLNAAVVDCCIGIPVYFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN 195 (726)
Q Consensus 116 el~a~~L~~l~~~a~~~~~~~~~~~VitVPa~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~ 195 (726)
+....+|++++..++...+.....+++|+|++|...+|++++.+++.+|+++..++.||+|++++|+.. .
T Consensus 71 ~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----------~ 140 (272)
T 3h1q_A 71 IGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----------D 140 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------S
T ss_pred HHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------C
Confidence 456788888888888887888889999999999999999999999999999999999999999988641 2
Q ss_pred EEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhc
Q 004867 196 VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVL 275 (726)
Q Consensus 196 vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~L 275 (726)
.+|+|+|||||+++++. .+.+ + ...+..+||.+||+.|.+++. .+ ...|+++|+.+
T Consensus 141 ~~viDiGggst~~~~~~--~g~~--~-~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k~~~ 196 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIE--KGKI--T-ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIKKDF 196 (272)
T ss_dssp EEEEEECSSCEEEEEEE--TTEE--E-EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHHHSS
T ss_pred EEEEEECCCcEEEEEEE--CCEE--E-EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHHHhc
Confidence 59999999999999976 3332 3 335889999999999988753 11 26788999887
Q ss_pred CCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc
Q 004867 276 SANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF 355 (726)
Q Consensus 276 s~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 355 (726)
+ ++.+|++++.++++++...+.+.++..+ +++.|+|+||++++|.++++|++.|
T Consensus 197 ~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l~~~l 250 (272)
T 3h1q_A 197 S----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEFSRFL 250 (272)
T ss_dssp T----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHHHHHH
T ss_pred C----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHHHHHh
Confidence 5 5899999999999999999999998753 4789999999999999999999999
Q ss_pred CCCCCCCCCchhhhhcchHHHH
Q 004867 356 GKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 356 g~~v~~~~n~~eaVa~GAa~~a 377 (726)
+.++..+.||++++|+|||++|
T Consensus 251 ~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 251 GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CCCccccCChHHHHHHHHHhcC
Confidence 9999889999999999999864
No 17
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.92 E-value=1.5e-24 Score=239.09 Aligned_cols=227 Identities=12% Similarity=0.052 Sum_probs=166.1
Q ss_pred cCcEEEEecCCCCHHHHHHHHHHH-HHhCCCceeeechhHHHHHH-hhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee
Q 004867 137 VVDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALA-YGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK 214 (726)
Q Consensus 137 ~~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AaAl~-y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 214 (726)
...++||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ..++.... +.+|||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~~~~-~glVvDiG~gtt~v~~v~-- 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGERTL-TGTVIDSGDGVTHVIPVA-- 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCSCCC-CEEEEEESSSCEEEEEEE--
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCCCCC-eEEEEEcCCCceEEEEeE--
Confidence 457999999999999999999999 88999999999999999877 421 11221123 779999999999999985
Q ss_pred CCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCc--------------
Q 004867 215 KGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPE-------------- 280 (726)
Q Consensus 215 ~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~-------------- 280 (726)
.|. .+.....+.++||++||+.|.++|.+++ +...... -...++++|+.++....
T Consensus 182 ~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 250 (418)
T 1k8k_A 182 EGY-VIGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGS 250 (418)
T ss_dssp TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGG
T ss_pred CCE-EcccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccccc
Confidence 343 2333234678999999999999987653 1221111 12567888888764321
Q ss_pred ---ccEEeccccCCcceEEEeCHHHH---HHHHhHHH------HHHHHHHHHHHHHcC--CCCCCccEEEEEcCCCChHH
Q 004867 281 ---APLNIECLMEEKDVRGFIKRDEF---EQISAPIL------ERVKRPLEKALAETG--LSVEDVHMVEVVGSSSRVPA 346 (726)
Q Consensus 281 ---~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~~------~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~srip~ 346 (726)
..+.++....+.+..+.+++++| |.+++|.+ ..|.++|.++|..+. +....++.|+|+||+|++|.
T Consensus 251 ~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg 330 (418)
T 1k8k_A 251 KWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRD 330 (418)
T ss_dssp GTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTT
T ss_pred ccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccccc
Confidence 23555544445567889999999 66666643 568889999998864 33455789999999999999
Q ss_pred HHHHHHHHcCC------------------------CCCCCCCchhhhhcchHHHHHH
Q 004867 347 IIKILTEFFGK------------------------EPRRTMNASECVARGCALQCAI 379 (726)
Q Consensus 347 v~~~l~~~fg~------------------------~v~~~~n~~eaVa~GAa~~aa~ 379 (726)
++++|++.++. ++..+.++..++.+||+++|..
T Consensus 331 ~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 331 FGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999876531 1223457789999999998863
No 18
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.92 E-value=6e-24 Score=232.51 Aligned_cols=199 Identities=15% Similarity=0.057 Sum_probs=156.6
Q ss_pred HHHHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCcc
Q 004867 151 LQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVG 230 (726)
Q Consensus 151 ~qR~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lG 230 (726)
...+.+.+|++.|||++..++.||+|||++|..... ....+++||+||||||+++++ +|.+. .+ ++.++|
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~-----~~~gv~vvDiGggttdisi~~--~g~~~--~~-~~i~~G 237 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPE-----KDRGVVVVNLGYNFTGLIAYK--NGVPI--KI-SYVPVG 237 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHH-----HHHCEEEEEECSSSEEEEEEE--TTEEE--EE-EEESCC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhcccc-----ccCCEEEEEECCCcEEEEEEE--CCEEE--EE-EecccH
Confidence 456789999999999999999999999998853221 246799999999999999976 44442 23 368999
Q ss_pred chHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCC-----CcccEEeccccCCcceEEEeCHHHHHH
Q 004867 231 GRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN-----PEAPLNIECLMEEKDVRGFIKRDEFEQ 305 (726)
Q Consensus 231 G~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~-----~~~~i~i~~l~~~~d~~~~itr~efe~ 305 (726)
|++||+.|+..+ ++. ...||++|+.++.. ....+.++.+. ......++|++|.+
T Consensus 238 G~~it~dIa~~l--------~~~-----------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l~~ 296 (419)
T 4a2a_A 238 MKHVIKDVSAVL--------DTS-----------FEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKLSV 296 (419)
T ss_dssp HHHHHHHHHHHH--------TCC-----------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHHHH
T ss_pred HHHHHHHHHHHH--------CCC-----------HHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHHHH
Confidence 999999998753 221 27899999998652 34456776653 24677899999999
Q ss_pred HHhHHHHHHHHHHHHHHHHcCC------CCCCccEEEEEcCCCChHHHHHHHHHHcCCCCC--C-----C----------
Q 004867 306 ISAPILERVKRPLEKALAETGL------SVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPR--R-----T---------- 362 (726)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~--~-----~---------- 362 (726)
+++|.++++...+++.|+.++. ....++.|+|+||+|++|.|++++++.||.++. . +
T Consensus 297 ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~~~ 376 (419)
T 4a2a_A 297 IIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADEVA 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccccc
Confidence 9999999999999999999987 345689999999999999999999999986543 2 1
Q ss_pred CCchhhhhcchHHHHHHh
Q 004867 363 MNASECVARGCALQCAIL 380 (726)
Q Consensus 363 ~n~~eaVa~GAa~~aa~l 380 (726)
.+|..+++.|.+++++..
T Consensus 377 ~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 377 NDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp TCGGGHHHHHTTCC----
T ss_pred CCchHHHHHHHHHHHhhc
Confidence 388999999999888643
No 19
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.91 E-value=1.9e-24 Score=234.70 Aligned_cols=213 Identities=11% Similarity=0.105 Sum_probs=154.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHHH-HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 004867 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (726)
Q Consensus 138 ~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (726)
..++||+|++++..+|+++.+++ +.+|++.+.+++||+|||++|+. .+.+|||+|+|||+++.+ .+|
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----------~~~lVvDiG~gtt~v~~v--~~G 168 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----------TTGIVLDSGDGVTHNVPI--YEG 168 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----------SSEEEEEECSSCEEEEEE--ETT
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC----------CeEEEEEcCCCceEEeEe--ECC
Confidence 46999999999999999888765 77899999999999999998863 367999999999998775 344
Q ss_pred eEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCC----------------Cc
Q 004867 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN----------------PE 280 (726)
Q Consensus 217 ~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~----------------~~ 280 (726)
. .+.......++||++||+.|.+++..+. +......+ ...++++|+.+... ..
T Consensus 169 ~-~~~~~~~~~~~GG~~lt~~l~~~l~~~~---~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~ 237 (375)
T 2fxu_A 169 Y-ALPHAIMRLDLAGRDLTDYLMKILTERG---YSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSSLE 237 (375)
T ss_dssp E-ECGGGCEEESCCHHHHHHHHHHHHHHHT---CCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred E-EeccceEEeccCHHHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCccC
Confidence 3 2332234678999999999999987651 22211111 13455566555322 12
Q ss_pred ccEEeccccCCcceEEEeCHHHH---HHHHhHH-----HHHHHHHHHHHHHHcC--CCCCCccEEEEEcCCCChHHHHHH
Q 004867 281 APLNIECLMEEKDVRGFIKRDEF---EQISAPI-----LERVKRPLEKALAETG--LSVEDVHMVEVVGSSSRVPAIIKI 350 (726)
Q Consensus 281 ~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~srip~v~~~ 350 (726)
..+.++ ++ ..+.|+++.| |.+++|. ...|.++|.++|..+. +....++.|+|+||+|++|.++++
T Consensus 238 ~~~~lp---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~r 312 (375)
T 2fxu_A 238 KSYELP---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADR 312 (375)
T ss_dssp EEEECT---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHH
T ss_pred eEEECC---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHH
Confidence 223332 22 2467888888 4455553 3567788888887653 223346789999999999999999
Q ss_pred HHHHcC--------CCCCCCCCchhhhhcchHHHHH
Q 004867 351 LTEFFG--------KEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 351 l~~~fg--------~~v~~~~n~~eaVa~GAa~~aa 378 (726)
|++.++ .++..+.+|..++++||+++|.
T Consensus 313 l~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 313 MQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 998875 2334567999999999999997
No 20
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.90 E-value=3.5e-23 Score=192.83 Aligned_cols=146 Identities=15% Similarity=0.309 Sum_probs=129.1
Q ss_pred EeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeE
Q 004867 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (726)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~ 465 (726)
+.|++|++||++|.++ .+.+|||||++||++++.+|++..+ +.|.+ |+|++.+ .+|.+||+|
T Consensus 2 ~~Dv~p~slGi~~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~V-yqGe~~~~~dn~~LG~f 68 (152)
T 3h0x_A 2 NADVNALTLGIETTGG------------VMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKV-YEGERAMSKDNNLLGKF 68 (152)
T ss_dssp -CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEE-EESSCSBGGGSEEEEEE
T ss_pred ccceeccEEEEEEcCC------------EEEEEEECcCccCEEEEEEEEeCCCCcceeeeeE-EEcCccccccCcEEEEE
Confidence 5799999999999876 6899999999999999999988665 67787 7888877 899999999
Q ss_pred EECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCcccccccccc
Q 004867 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (726)
Q Consensus 466 ~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (726)
.|.|+|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 69 ~l~gipp~p~G~~~I~Vtf~iD~nGiL~V~a~d----------------------------------------------- 101 (152)
T 3h0x_A 69 ELTGIPPAPRGVPQIEVTFALDANGILKVSATD----------------------------------------------- 101 (152)
T ss_dssp EECCCCCCCTTCSCEEEEEEECTTSEEEEEEEE-----------------------------------------------
T ss_pred EEeCCCCCCCCCceEEEEEEEcCCCEEEEEEEE-----------------------------------------------
Confidence 999999999898999999999999999999951
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhH
Q 004867 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (726)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~ 625 (726)
+.++++..++|.... .+||+++|++|++++++|+.+|++.+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~I~~~~-~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~ 146 (152)
T 3h0x_A 102 ----------------------------------KGTGKSESITITNDK-GRLTQEEIDRMVEEAEKFASEDASIKAKVE 146 (152)
T ss_dssp ----------------------------------TTTCCEEEEEEECCT-TCCCHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ----------------------------------cCCCcEeEEEEecCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 233456678887654 479999999999999999999999999999
Q ss_pred HHhhHH
Q 004867 626 RKNAVE 631 (726)
Q Consensus 626 akN~LE 631 (726)
+||+||
T Consensus 147 ~~n~le 152 (152)
T 3h0x_A 147 SRNKLE 152 (152)
T ss_dssp CSCCCC
T ss_pred HHhhcC
Confidence 999986
No 21
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.89 E-value=4.1e-23 Score=192.02 Aligned_cols=146 Identities=17% Similarity=0.342 Sum_probs=125.2
Q ss_pred EeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeE
Q 004867 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (726)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~ 465 (726)
+.|++|++||++|.++ .+.+|||||++||++++.+|++..| +.|.+ |+|++.+ .+|.+||+|
T Consensus 2 ~~Dv~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~V-yqGe~~~~~dn~~LG~f 68 (152)
T 3dob_A 2 NADVAPLSLGIETAGG------------VMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQV-YEGERAMTRDNHRLGTF 68 (152)
T ss_dssp --CBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGGGSEEEEEE
T ss_pred ceeeecceEEEEEcCC------------EEEEEEECcCccCEEEEEEEEECCCCceEEEEEE-EEcCccccccCceeEEE
Confidence 6799999999999876 6899999999999999999998665 56777 7888877 899999999
Q ss_pred EECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCcccccccccc
Q 004867 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (726)
Q Consensus 466 ~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (726)
.|.|+|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 69 ~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~d----------------------------------------------- 101 (152)
T 3dob_A 69 ELSGIPPAPRGVPQIEVTFNIDANGILNVSAED----------------------------------------------- 101 (152)
T ss_dssp EEECCCCCCTTCCCEEEEEEECTTCCEEEEEEE-----------------------------------------------
T ss_pred EEeCCCCCCCCCceEEEEEEeCCCCeEEEEEEE-----------------------------------------------
Confidence 999999999898999999999999999999951
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhH
Q 004867 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (726)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~ 625 (726)
+.++++..+.|.... +.||+++|++|++++++++.+|++.+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~I~~~~-~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~ 146 (152)
T 3dob_A 102 ----------------------------------KSTGKSNRITIQNEK-GRLTQSDIDRMVHEAKQFEKEDGEQRERVQ 146 (152)
T ss_dssp ----------------------------------TTTCCEEEEEECCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCC
T ss_pred ----------------------------------cCCCCEEEEEEEcCC-CCCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 233455678887654 369999999999999999999999999999
Q ss_pred HHhhHH
Q 004867 626 RKNAVE 631 (726)
Q Consensus 626 akN~LE 631 (726)
+||.||
T Consensus 147 ~~n~le 152 (152)
T 3dob_A 147 ARNQLE 152 (152)
T ss_dssp CCSEEC
T ss_pred HHhhcC
Confidence 999986
No 22
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.89 E-value=2.9e-23 Score=192.75 Aligned_cols=145 Identities=17% Similarity=0.315 Sum_probs=127.8
Q ss_pred EeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeE
Q 004867 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (726)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~ 465 (726)
+.|++|++||++|.++ .+.+|||||++||++++.+|++..| +.|.+ |+|++.+ .+|.+||+|
T Consensus 2 ~~DV~p~slGie~~gg------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~V-yqGe~~~~~dn~~LG~f 68 (151)
T 3dqg_A 2 NADVTPLSLGIETLGG------------IMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKV-FQGEREMATSNKLLGQF 68 (151)
T ss_dssp --CBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEE-EESSCSBGGGSEEEEEE
T ss_pred cceeeeeEEEEEEcCC------------EEEEEEECcCccCEEEEEEEEECCCCcceEEEEE-EEcCCcccccCcEEEEE
Confidence 5799999999999886 6899999999999999999988664 77787 7888877 899999999
Q ss_pred EECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCcccccccccc
Q 004867 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (726)
Q Consensus 466 ~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (726)
.|.|+|+.+.|.++|+|+|.+|.||+|+|++. +
T Consensus 69 ~l~gipp~p~G~~~IeVtf~iD~nGiL~Vsa~-------------------------d---------------------- 101 (151)
T 3dqg_A 69 SLVGIPPAPRGVPQVEVTFDIDANGIVNVSAR-------------------------D---------------------- 101 (151)
T ss_dssp EEECCCCCCTTCSCEEEEEEECTTSEEEEEEE-------------------------E----------------------
T ss_pred EEeCCCCCCCCCcEEEEEEEeccCcEEEEEEE-------------------------E----------------------
Confidence 99999999989899999999999999999995 1
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhH
Q 004867 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (726)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~ 625 (726)
+.++++..+.|... .+||+++|++|++++++|+.+|++.+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~I~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~ 145 (151)
T 3dqg_A 102 ----------------------------------RGTGKEQQIVIQSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVE 145 (151)
T ss_dssp ----------------------------------TTTCCEEEEEEECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEE
T ss_pred ----------------------------------ccCCCEeEEEEecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 23345667888765 489999999999999999999999999999
Q ss_pred HHhhHH
Q 004867 626 RKNAVE 631 (726)
Q Consensus 626 akN~LE 631 (726)
+||.||
T Consensus 146 ~~n~~e 151 (151)
T 3dqg_A 146 VINQAE 151 (151)
T ss_dssp CBCCCC
T ss_pred HHhhcC
Confidence 999986
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=2.4e-22 Score=213.35 Aligned_cols=227 Identities=12% Similarity=0.094 Sum_probs=149.0
Q ss_pred eEEcHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEecCC-CCHH--HH--HHHHHH------------HHHhCCCceeeec
Q 004867 110 RVFTPTQVLGMLLSNLKAIAESNLNAAVVDCCIGIPVY-FTDL--QR--RAVIDA------------ATIAGLHPLRLFH 172 (726)
Q Consensus 110 ~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-f~~~--qR--~~l~~A------------a~~AGl~~~~li~ 172 (726)
..+++..+++.+ ..|+. +. ..+.+ ..+|+++|.. |... || .++.+- ++.+++..+.+++
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~-~~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SG-LPVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HS-CCSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cC-CCCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 356777776643 44443 21 11222 3699999987 6531 22 222221 2334566789999
Q ss_pred hhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhcc
Q 004867 173 ETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKI 252 (726)
Q Consensus 173 Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~ 252 (726)
||.||+++|+.... .+..++|+|+||||||+++++ ++.+.+.++.++.++||.+||+.|++++.++ +.
T Consensus 148 e~~aa~~~~~~~~~-----~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~ 215 (320)
T 2zgy_A 148 ESIPAGYEVLQELD-----ELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RT 215 (320)
T ss_dssp SSHHHHHHHHHHSC-----TTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SB
T ss_pred CcHHHHHhhhcccc-----CCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CC
Confidence 99999998863211 357899999999999999987 4445566666788999999999999887532 33
Q ss_pred CccCCHHHHHHHHHHHHHH-hhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCC
Q 004867 253 DVSQNARASLRLRVACEKL-KKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVED 331 (726)
Q Consensus 253 ~~~~~~~~~~rL~~~ae~~-K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~ 331 (726)
++.. ..++++ |..- ... ......+ . .-.++++.+++++.++++...|.+.++.. .+
T Consensus 216 ~i~~---------~~ae~~lk~~~---~~~--~~~~~i~---~--~~~~~~~~~~i~~~~~~~~~~i~~~i~~~----~~ 272 (320)
T 2zgy_A 216 KGSS---------YLADDIIIHRK---DNN--YLKQRIN---D--ENKISIVTEAMNEALRKLEQRVLNTLNEF----SG 272 (320)
T ss_dssp GGGH---------HHHHHHHHTTT---CHH--HHHHHSS---S--SCTHHHHHHHHHHHHHHHHHHHHHHHTTC----CC
T ss_pred CCCH---------HHHHHHHHHhh---hhh--cccceec---C--chhhHHHHHHHHHHHHHHHHHHHHHHHhh----cC
Confidence 3321 234444 3320 000 0000000 0 01345666666666666666666666542 57
Q ss_pred ccEEEEEcCCCChHHHHHHHHHHcCC---CCCCCCCchhhhhcchHHHH
Q 004867 332 VHMVEVVGSSSRVPAIIKILTEFFGK---EPRRTMNASECVARGCALQC 377 (726)
Q Consensus 332 i~~ViLvGG~srip~v~~~l~~~fg~---~v~~~~n~~eaVa~GAa~~a 377 (726)
++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 8999999999998 99999999986 57778899999999999875
No 24
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.86 E-value=2e-21 Score=182.06 Aligned_cols=146 Identities=14% Similarity=0.310 Sum_probs=125.2
Q ss_pred EeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCcceeeE
Q 004867 391 VNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPAKISTY 465 (726)
Q Consensus 391 ~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~~i~~~ 465 (726)
+.|++|++||+++.++ .+.+||+||+++|++++.+|.+..+ +.|.++ +|++.+ .+|.+||+|
T Consensus 2 v~Dv~p~slGi~~~~g------------~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~-qGe~~~~~~n~~lg~~ 68 (152)
T 2op6_A 2 NADVNPLTLGIETVGG------------VMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIY-EGERPMVMDNHKLGNF 68 (152)
T ss_dssp -CCBCSSCEEEEETTT------------EEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEE-ESSCSBGGGSEEEEEE
T ss_pred ceEeecccEEEEEeCC------------EEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEE-EeCCccCccCCEeEEE
Confidence 5799999999999876 6899999999999999999988665 888885 566666 889999999
Q ss_pred EECCCCCCCcccceEEEEEEEcCCCcEEEEEeeeeeeeecccccCCCchhhhccccCCCCCCCCCCCCCCcccccccccc
Q 004867 466 TIGPFQSTKSERAKVKVKVRLNMHGIVSIESATLLEEEEVEVPVTKEPEKEAAKMETDEVPSDAAPPSSSETDVNMQDAK 545 (726)
Q Consensus 466 ~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (726)
.|.++|+.+.|.++|+|+|.+|.||+|+|++.+
T Consensus 69 ~l~gipp~p~G~~~I~V~f~id~nGiL~V~a~d----------------------------------------------- 101 (152)
T 2op6_A 69 DVTGIPPAPRGVPQIEVTFEIDVNGILHVSAED----------------------------------------------- 101 (152)
T ss_dssp EECCCCCCCTTCSCEEEEEEECTTSCEEEEEEE-----------------------------------------------
T ss_pred EEECCCCCCCCCceEEEEEEECCCcEEEEEEEE-----------------------------------------------
Confidence 999999998888999999999999999999851
Q ss_pred CccCCCCCCCCCCCCCCCCCCCCCCCCccccCCCcccceeEeeeEEeccCCCCCHHHHHHHHHHHHHHhhcchhHHHhhH
Q 004867 546 GTADAQGTTDAPGAENGVPESGDKPTQMETDKTPKKKVKKTNIPVSELVYGGMLPVDVQKAVEKEFEMALQDRVMEETKD 625 (726)
Q Consensus 546 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~k~~~l~v~~~~~~~ls~~~~~~~~~~~~~~~~~D~~~~~~~~ 625 (726)
+.++++..++|.... .+||+++++++++++.+|+.+|+..+++.+
T Consensus 102 ----------------------------------~~tg~~~~i~i~~~~-~~ls~eei~~~~~~~~~~~~~d~~~~~~~~ 146 (152)
T 2op6_A 102 ----------------------------------KGTGNKNKLTITNDH-NRLSPEDIERMINDADKFAADDQAQKEKVE 146 (152)
T ss_dssp ----------------------------------TTTCCEEEEEECSSS-SCCCHHHHHHHHHHHHHTHHHHHHHHHHSC
T ss_pred ----------------------------------ecCCcEEEEEeeccc-cCCCHHHHHHHHHHHHHhHhccHHHHHHHH
Confidence 111234567776553 479999999999999999999999999999
Q ss_pred HHhhHH
Q 004867 626 RKNAVE 631 (726)
Q Consensus 626 akN~LE 631 (726)
+||+||
T Consensus 147 ~kn~~e 152 (152)
T 2op6_A 147 SRNELE 152 (152)
T ss_dssp CCSEEC
T ss_pred HHhhcC
Confidence 999986
No 25
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.77 E-value=4.3e-20 Score=201.38 Aligned_cols=214 Identities=15% Similarity=0.172 Sum_probs=91.7
Q ss_pred CcEEEEecCCCCHHHHHHHHHHH-HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 004867 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (726)
Q Consensus 138 ~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (726)
..++||+|++++..+|+++.+++ +.+|++.+.++++|.||+++++. .+.+|+|+|+|+|+++.+. +|
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~----------~~~lVVDiG~g~T~v~pv~--~G 172 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL----------LTGVVVDSGDGVTHICPVY--EG 172 (394)
T ss_dssp -----------------------------------------------------------CCEEEECSSCEEEECEE--TT
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC----------ceEEEEEcCCCceEeeeeE--CC
Confidence 45999999999999999998865 77899999999999999988864 3569999999999998763 33
Q ss_pred eEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCc----------------
Q 004867 217 QLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPE---------------- 280 (726)
Q Consensus 217 ~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~---------------- 280 (726)
.+ +........+||+++|+.|.++|..+ .+......+. ..++.+|+.+.....
T Consensus 173 ~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~ 241 (394)
T 1k8k_B 173 FS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241 (394)
T ss_dssp EE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTC
T ss_pred EE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCc
Confidence 32 21112346899999999999998754 1222111121 456666766643221
Q ss_pred ccEEeccccCCcceEEEeCHHHH---HHHHhHH-----HHHHHHHHHHHHHHcCCC--CCCccEEEEEcCCCChHHHHHH
Q 004867 281 APLNIECLMEEKDVRGFIKRDEF---EQISAPI-----LERVKRPLEKALAETGLS--VEDVHMVEVVGSSSRVPAIIKI 350 (726)
Q Consensus 281 ~~i~i~~l~~~~d~~~~itr~ef---e~l~~~~-----~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~srip~v~~~ 350 (726)
..+.+ .++. .+.|+++.| |-+++|. ...|.+.|.+.|..+... ..-++.|+|+||+|++|.+.++
T Consensus 242 ~~~~l---pdg~--~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 242 ESYTL---PDGR--IIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp EEEEC---TTSC--EEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred eEEEC---CCCC--EEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 11222 2222 466788877 3334442 245778888888887432 2335789999999999999999
Q ss_pred HHHHcCC-----------------CC--CCCCCchhhhhcchHHHHHH
Q 004867 351 LTEFFGK-----------------EP--RRTMNASECVARGCALQCAI 379 (726)
Q Consensus 351 l~~~fg~-----------------~v--~~~~n~~eaVa~GAa~~aa~ 379 (726)
|++.++. ++ ..+.++..++.+|++++|..
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9887642 22 22557789999999998863
No 26
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.77 E-value=1.8e-18 Score=179.47 Aligned_cols=188 Identities=16% Similarity=0.110 Sum_probs=124.4
Q ss_pred HhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHH
Q 004867 162 IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQH 241 (726)
Q Consensus 162 ~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 241 (726)
.++...+..|+|++|.++++.+.. +....|+|+|||+++++++. .++.+.+....++...||.+|+..++++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~-------~~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~ 139 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFII-------PETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKI 139 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHS-------TTCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhC-------CCCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHH
Confidence 366778899999999998876543 23457899999999999884 5677888888889999999999999988
Q ss_pred HHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHHH
Q 004867 242 FAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKA 321 (726)
Q Consensus 242 l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~ 321 (726)
+.-.+.....+ +..++....-.....+....-. ....-.....++++..+...+.+.+...
T Consensus 140 l~~~~~~~~~~---------------~~~a~~~~~i~~~~~~f~~s~~----~~~~~~~~~~~di~a~~~~~v~~~l~~~ 200 (276)
T 4ehu_A 140 IEVDVSELGSI---------------SMNSQNEVSISSTCTVFAESEV----ISHLSENAKIEDIVAGIHTSVAKRVSSL 200 (276)
T ss_dssp HTCCGGGHHHH---------------HTTCSSCCCCCCCSHHHHHHHH----HHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred hccChhhhHHH---------------HhcCCCCCCcCCccchhhhhHH----HHhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 75443221111 1111110000000000000000 0000000112455666665555555444
Q ss_pred HHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHh
Q 004867 322 LAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAIL 380 (726)
Q Consensus 322 l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~l 380 (726)
.... ..++.|+|+||.+++|.|++.|++.||.++..+.||++++|+|||++|...
T Consensus 201 ~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~ 255 (276)
T 4ehu_A 201 VKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDE 255 (276)
T ss_dssp HHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHH
T ss_pred HHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHH
Confidence 4433 356889999999999999999999999999999999999999999999754
No 27
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.67 E-value=1.3e-16 Score=170.75 Aligned_cols=205 Identities=15% Similarity=0.173 Sum_probs=139.5
Q ss_pred CcEEEEecCCCCHHHH-HHHHHHHHHhCC------------CceeeechhHHHHHHhhhhcCCCCCC---CCceEEEEEe
Q 004867 138 VDCCIGIPVYFTDLQR-RAVIDAATIAGL------------HPLRLFHETTATALAYGIYKTDLPEN---DQLNVAFVDI 201 (726)
Q Consensus 138 ~~~VitVPa~f~~~qR-~~l~~Aa~~AGl------------~~~~li~Ep~AaAl~y~~~~~~~~~~---~~~~vlv~D~ 201 (726)
..+++.+|..+...+| +++++++...+- ..+.+++||.||++++++... +.. .+..++|+|+
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~--~~~~~~~~~~~~vvDi 191 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENG--KVFKAFTEGKYSVLDF 191 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETT--EECHHHHTCEEEEEEE
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccC--ccccccccCcEEEEEe
Confidence 3689999999998887 589998875543 467899999999999875431 100 2678999999
Q ss_pred CCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcc
Q 004867 202 GHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA 281 (726)
Q Consensus 202 Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 281 (726)
||||||++++ .++.+ +....+...+||..+++.|.+++.+++. +..+. . ...++.+. +
T Consensus 192 GggTtd~~v~--~~~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~------ 249 (355)
T 3js6_A 192 GSGTTIIDTY--QNMKR-VEEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-Y------ 249 (355)
T ss_dssp CSSCEEEEEE--ETTEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC--------
T ss_pred CCCcEEEEEE--cCCEE-ccccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-c------
Confidence 9999999998 34332 1112335679999999999999877631 22222 1 11111111 0
Q ss_pred cEEeccccCCcc--eEEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHH--HHHHHHHHcCC
Q 004867 282 PLNIECLMEEKD--VRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPA--IIKILTEFFGK 357 (726)
Q Consensus 282 ~i~i~~l~~~~d--~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~--v~~~l~~~fg~ 357 (726)
.. .+.+ -.+.+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. |.+.|++.|+.
T Consensus 250 --~~----~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~ 318 (355)
T 3js6_A 250 --KQ----CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEK 318 (355)
T ss_dssp ------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEEC
T ss_pred --cc----ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCC
Confidence 00 0000 00111 4456777778888888888777753 466899999999999998 89999998854
Q ss_pred CCCCCCCchhhhhcchHHHHHHhC
Q 004867 358 EPRRTMNASECVARGCALQCAILS 381 (726)
Q Consensus 358 ~v~~~~n~~eaVa~GAa~~aa~ls 381 (726)
. .||..|+|+|+..++..+.
T Consensus 319 ~----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 319 A----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp C----SSGGGHHHHHHHHHHHHHH
T ss_pred C----CCcHHHHHHHHHHHHHHHH
Confidence 2 8999999999999988764
No 28
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.58 E-value=3.5e-15 Score=135.90 Aligned_cols=99 Identities=15% Similarity=0.298 Sum_probs=82.8
Q ss_pred ccceEEeeecccceEEEecCCCCcccccCCCCCceEEEEeCCCCCCceeEEEEeeccc----EEEEEEEeccccC-CCCc
Q 004867 386 VREFQVNESFPFSISLSWKGSAPEAQNETGDNQQSTTVFPKGNPIPSVKALTFYRSGT----FTVDVQYADVSEL-RAPA 460 (726)
Q Consensus 386 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~P~~k~~~~~~~~~----~~i~~~y~~~~~~-~~~~ 460 (726)
++++.+.|++|++||+++.++ .+.+||+||+++|++++.+|.+..+ +.|.++ ++++.+ .+|.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g------------~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~Vy-qGe~~~~~~n~ 80 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGG------------VMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVL-QGERKRAADNK 80 (135)
T ss_dssp -------CCCSSCCCEEETTT------------EECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEE-ECCSSSCSSSE
T ss_pred eCcEEEEEeecCcEEEEEECC------------EEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEE-EeCCcccccCc
Confidence 468899999999999999876 6889999999999999999987553 888885 566666 8899
Q ss_pred ceeeEEECCCCCCCcccceEEEEEEEcCCCcEEEEEe
Q 004867 461 KISTYTIGPFQSTKSERAKVKVKVRLNMHGIVSIESA 497 (726)
Q Consensus 461 ~i~~~~i~~~~~~~~~~~~v~v~~~~d~~Gil~v~~~ 497 (726)
+||+|.|.++|+.+.|.++|+|+|++|.||+|+|++.
T Consensus 81 ~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~ 117 (135)
T 1q5l_A 81 SLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAK 117 (135)
T ss_dssp EEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEE
T ss_pred EEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEE
Confidence 9999999999999888899999999999999999995
No 29
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.57 E-value=6e-16 Score=164.19 Aligned_cols=203 Identities=10% Similarity=0.124 Sum_probs=142.1
Q ss_pred CcEEEEecCCCCH--HHHHHHHHHHHHh--------C------CCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEe
Q 004867 138 VDCCIGIPVYFTD--LQRRAVIDAATIA--------G------LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDI 201 (726)
Q Consensus 138 ~~~VitVPa~f~~--~qR~~l~~Aa~~A--------G------l~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~ 201 (726)
..+++++|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. ... ....++|+|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~~~---~~~~v~vvDi 179 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---ENF---KNKNVAVIDF 179 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---CCC---TTCEEEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---hhh---ccCCEEEEEe
Confidence 4789999998774 3677787776521 1 124678899988876542 111 4688999999
Q ss_pred CCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcc
Q 004867 202 GHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA 281 (726)
Q Consensus 202 Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~ 281 (726)
||||||++++. ++.+ +....+...+||.++++.|.+++.+ .+|+..+.. ..++++|+. . ..
T Consensus 180 GggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~--g--~~ 240 (329)
T 4apw_A 180 GGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN--G--YM 240 (329)
T ss_dssp CSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS--C--SS
T ss_pred CCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc--C--Cc
Confidence 99999999987 3433 2222346789999999999987654 045555544 234444443 1 11
Q ss_pred cEEeccccCCcceEEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCC
Q 004867 282 PLNIECLMEEKDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRR 361 (726)
Q Consensus 282 ~i~i~~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~ 361 (726)
. .+.+. ..+..+.+++.+++++++|...+++. +..++.++.|+|+||++.+ +.+.|++.|+.++..
T Consensus 241 ~-------~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v 306 (329)
T 4apw_A 241 K-------KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNSII 306 (329)
T ss_dssp C-------EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCEEC
T ss_pred c-------cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCCEe
Confidence 0 01111 13457778888888888877777765 3455568999999999998 669999999977778
Q ss_pred CCCchhhhhcchHHHHHH
Q 004867 362 TMNASECVARGCALQCAI 379 (726)
Q Consensus 362 ~~n~~eaVa~GAa~~aa~ 379 (726)
..||..|+|+|+..++..
T Consensus 307 ~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 307 TNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp CSSGGGHHHHHHHHHHHH
T ss_pred cCCChhhHHHHHHHHHhh
Confidence 889999999999988764
No 30
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.42 E-value=8.4e-14 Score=152.24 Aligned_cols=222 Identities=12% Similarity=0.062 Sum_probs=142.2
Q ss_pred CcEEEEecCCCCHHHHHHHHHHH-HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 004867 138 VDCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (726)
Q Consensus 138 ~~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (726)
..+++|.|+..+...|+.+.+.+ +..|++.+.++.+|.+|+++.+.... .. ....+-||+|+|+|+|+++.+. . |
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~-~~-~~~~tglVVDiG~g~T~v~PV~-~-G 199 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSK-VT-DRSLTGTVVDSGDGVTHIIPVA-E-G 199 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTT-TC-SCCCCEEEEEESSSCEEEEEEE-T-T
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCccc-cc-CCCceEEEEECCCCceEEEEEE-C-C
Confidence 46999999999999999999887 78999999999999999988774321 00 0135679999999999999973 2 2
Q ss_pred eEEEEEE-ecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcc---c--------EE
Q 004867 217 QLKILGH-SFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEA---P--------LN 284 (726)
Q Consensus 217 ~~~vl~~-~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~---~--------i~ 284 (726)
. ++.. .....+||+++|+.|.++|..+... ... ...++.+|+.+..-... . ..
T Consensus 200 ~--~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~----~~~---------~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~ 264 (427)
T 3dwl_A 200 Y--VIGSSIKTMPLAGRDVTYFVQSLLRDRNEP----DSS---------LKTAERIKEECCYVCPDIVKEFSRFDREPDR 264 (427)
T ss_dssp E--ECGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC----
T ss_pred E--EehhhheeccccHHHHHHHHHHHHHHcCCC----chh---------HHHHHHHHHhcCcccCCHHHHHHHhhcCccc
Confidence 2 2221 1135799999999999887654321 111 14566667666432110 0 00
Q ss_pred ec--cc--cCCcceEEEeCHHHH---HHHHhHH------HHHHHHHHHHHHHHcCCC--CCCccEEEEEcCCCChHHHHH
Q 004867 285 IE--CL--MEEKDVRGFIKRDEF---EQISAPI------LERVKRPLEKALAETGLS--VEDVHMVEVVGSSSRVPAIIK 349 (726)
Q Consensus 285 i~--~l--~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~srip~v~~ 349 (726)
+. .+ .++....+.|..+.| |-+++|- ...|.++|.+.|.++... ..-...|+|+||+|.+|.+.+
T Consensus 265 ~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~ 344 (427)
T 3dwl_A 265 YLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGN 344 (427)
T ss_dssp -CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTH
T ss_pred cceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHH
Confidence 00 01 233334567777776 3344552 245778888888775321 111356999999999999999
Q ss_pred HHHHHcC----------------------CCCCCCCCchhhhhcchHHHHH
Q 004867 350 ILTEFFG----------------------KEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 350 ~l~~~fg----------------------~~v~~~~n~~eaVa~GAa~~aa 378 (726)
+|.+.+. .++..+.++..++=+|++++|.
T Consensus 345 RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 345 RLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 9887541 1122345667889999999986
No 31
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.40 E-value=1.5e-12 Score=143.82 Aligned_cols=178 Identities=14% Similarity=0.078 Sum_probs=115.9
Q ss_pred eEEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCC----ceeecHhhHhhhhcCccchHHHHHHhhccCCCC
Q 004867 2 SVVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDK----QRFIGTAGAASSTMNPKNSISQIKRLIGRQFSD 77 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~----~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~ 77 (726)
..|+||+||.++++++...+.+.+ .+||+|+.... ..+||.++.... +. .+-
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~--------v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~--------~l~----- 79 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQS--------ILPSVYGKYTADEGNKKIFSEQSIGIP---RK--------DYE----- 79 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSE--------EEESEEEEESSCSSCCEECCTTGGGSC---CT--------TEE-----
T ss_pred CeEEEECCCcEEEEEECCCCCeee--------ecCceeEEeccCCCccEEEecHHHhcC---cC--------ceE-----
Confidence 468999999999999865543333 35999998532 357787632110 00 000
Q ss_pred HHHHHhhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhcCC--CcC-cEEEEecCCCCHHHHH
Q 004867 78 PELQRDLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNLNA--AVV-DCCIGIPVYFTDLQRR 154 (726)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~--~~~-~~VitVPa~f~~~qR~ 154 (726)
-.+| ..+|. +.--+.+..+++|+... .++. .-. .+++|.|+..+...|+
T Consensus 80 -------l~~P-----i~~Gv-------------I~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 80 -------LKPI-----IENGL-------------VIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp -------EEES-----EETTE-------------ESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred -------Eecc-----CcCCE-------------EccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHH
Confidence 0011 11232 11123444555555432 2332 123 5999999999999999
Q ss_pred HHHHHH-HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchH
Q 004867 155 AVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRD 233 (726)
Q Consensus 155 ~l~~Aa-~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~ 233 (726)
.|.+.+ +.+|++.+.++.+|.+|++++|. .+-||+|+|+|+|+++.+. .|.. +........+||++
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~----------~tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~ 198 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGR----------PNCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKF 198 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTC----------SSEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCC----------CeEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHH
Confidence 999875 78999999999999999987763 1249999999999999874 3321 11111135799999
Q ss_pred HHHHHHHHHHH
Q 004867 234 FDEVLFQHFAA 244 (726)
Q Consensus 234 iD~~l~~~l~~ 244 (726)
+|+.|.++|..
T Consensus 199 lt~~L~~lL~~ 209 (498)
T 3qb0_A 199 INHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 32
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.31 E-value=1.1e-11 Score=109.41 Aligned_cols=82 Identities=23% Similarity=0.364 Sum_probs=76.5
Q ss_pred hHHHhhHHHhhHHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHH
Q 004867 619 VMEETKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEER 697 (726)
Q Consensus 619 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R 697 (726)
.+|++.++||.||+|||.+|..|.+ .+..++++++++.|...|+++++||+.+ .++++++|+.++++|++++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999999974 5889999999999999999999999985 6789999999999999999999999
Q ss_pred HHhh
Q 004867 698 YKEF 701 (726)
Q Consensus 698 ~~e~ 701 (726)
++..
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9864
No 33
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.12 E-value=6.5e-10 Score=119.79 Aligned_cols=197 Identities=18% Similarity=0.169 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHh-CC--CceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecC
Q 004867 150 DLQRRAVIDAATIA-GL--HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFD 226 (726)
Q Consensus 150 ~~qR~~l~~Aa~~A-Gl--~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~ 226 (726)
..+-+.+.+|.+.+ |+ .+-. .||.||+++..... .....++++||||||||++++.-.. +. .+ ..
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD-----E~eLGvaiIDmGGGTTd~sVf~~G~--lv--~a-~~ 434 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP-----GTTRPLAILDLGAGSTDASIINPKG--DI--IA-TH 434 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEECTTC--CE--EE-EE
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEcCCc--EE--EE-EE
Confidence 34568888999999 99 6666 89999998875422 1367799999999999999965442 21 11 13
Q ss_pred CCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCC----------CcccEEe--cccc----C
Q 004867 227 RSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN----------PEAPLNI--ECLM----E 290 (726)
Q Consensus 227 ~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~----------~~~~i~i--~~l~----~ 290 (726)
...||++++..|+.-|. + .+ +..||++|. .... ....+.+ +.+. .
T Consensus 435 ip~gG~~VT~DIA~~Lg--------t--~d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~ 495 (610)
T 2d0o_A 435 LAGAGDMVTMIIARELG--------L--ED--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA 495 (610)
T ss_dssp EECSHHHHHHHHHHHHT--------C--CC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT
T ss_pred eccchHHHHHHHHHHhC--------C--CC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee
Confidence 67999999999986532 2 11 167899998 5321 1224444 2221 1
Q ss_pred C-----cceEEEeCHHH--HHHHHhHHHHHHHHH--HHHHHHHcCC-----CCCCccEEEEEcCCCChHHHHHHHHHHcC
Q 004867 291 E-----KDVRGFIKRDE--FEQISAPILERVKRP--LEKALAETGL-----SVEDVHMVEVVGSSSRVPAIIKILTEFFG 356 (726)
Q Consensus 291 ~-----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~srip~v~~~l~~~fg 356 (726)
. .+--..| +.+ +|+ ++-+-+++.+. +...|+..+. ...+|..|+|+||+|.++.+.++.++.|+
T Consensus 496 Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~ 573 (610)
T 2d0o_A 496 RVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALA 573 (610)
T ss_dssp CEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTT
T ss_pred eeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 1 0111244 555 666 55555554443 2333555322 34578999999999999999999999998
Q ss_pred C-CC-------CCCCCchhhhhcchHHHHHH
Q 004867 357 K-EP-------RRTMNASECVARGCALQCAI 379 (726)
Q Consensus 357 ~-~v-------~~~~n~~eaVa~GAa~~aa~ 379 (726)
. ++ ...-+|..|+|.|.+++.+.
T Consensus 574 ~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 574 HYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp TSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred cCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 6 43 22458999999999987654
No 34
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.09 E-value=1.4e-09 Score=125.03 Aligned_cols=110 Identities=15% Similarity=0.309 Sum_probs=80.0
Q ss_pred HHHHHHH-HHhcCCCcC-----cEEEEecCCCCHHHHHHHHHHH-HHhCCCceeeechhHHHHHHhhhhcCCCCCCCCce
Q 004867 123 SNLKAIA-ESNLNAAVV-----DCCIGIPVYFTDLQRRAVIDAA-TIAGLHPLRLFHETTATALAYGIYKTDLPENDQLN 195 (726)
Q Consensus 123 ~~l~~~a-~~~~~~~~~-----~~VitVPa~f~~~qR~~l~~Aa-~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~ 195 (726)
..|++++ ...++.... .+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .+
T Consensus 178 e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~----------~t 247 (593)
T 4fo0_A 178 EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL----------SS 247 (593)
T ss_dssp HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC----------SE
T ss_pred HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC----------Cc
Confidence 3444444 345665433 4999999999999999887764 56699999999999999988763 35
Q ss_pred EEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccchHHHHHHHHHHHHH
Q 004867 196 VAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAK 245 (726)
Q Consensus 196 vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~ 245 (726)
-+|||+|++.|.|+-|. +|.. +....-...+||+++++.|.++|..+
T Consensus 248 glVVDiG~~~T~v~PV~--dG~~-l~~~~~rl~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 248 TCIVDVGDQKTSVCCVE--DGVS-HRNTRLCLAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp EEEEEECSSCEEEEEEE--SSCB-CGGGCEEESCCHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCCceeeeeeE--CCEE-ehhheEEecccHHHHHHHHHHHHHhc
Confidence 69999999999988753 2211 11111235699999999999887654
No 35
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.08 E-value=8.8e-11 Score=127.00 Aligned_cols=194 Identities=17% Similarity=0.153 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHh-CC--CceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCC
Q 004867 152 QRRAVIDAATIA-GL--HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRS 228 (726)
Q Consensus 152 qR~~l~~Aa~~A-Gl--~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~ 228 (726)
+-+.+.+|.+.+ |+ .+-. .||.||+++..... .....++++||||||||++++.-.. + + .+ ....
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed-----E~elGvaiIDmGgGTTd~sVf~~g~--l-v-~a-~~ip 438 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTP-----GCAAPLAILDLGAGSTDAAIVNAEG--Q-I-TA-VHLA 438 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST-----TCCSSEEEEEECSSEEEEEEECSSS--C-E-EE-EEEE
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-----CCcCCeEEEEeCCCcceEEEEcCCc--E-E-EE-EEec
Confidence 346788888888 99 5555 89999998875422 1367799999999999999975443 2 1 11 1367
Q ss_pred ccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCC----------CcccEEe--cccc----CC-
Q 004867 229 VGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSAN----------PEAPLNI--ECLM----EE- 291 (726)
Q Consensus 229 lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~----------~~~~i~i--~~l~----~~- 291 (726)
.||++++..|+.-|. + .+ +..||++|. .... ....+.+ +.+. ..
T Consensus 439 ~gG~~VT~DIA~~Lg--------~--~d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~ 499 (607)
T 1nbw_A 439 GAGNMVSLLIKTELG--------L--ED--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKV 499 (607)
T ss_dssp CCHHHHHHHHHHHHT--------C--SC--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCE
T ss_pred cchHHHHHHHHHHhC--------C--CC--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeee
Confidence 999999999986532 2 10 167899998 5321 1223444 2221 11
Q ss_pred ----cceEEEeCHHH--HHHHHhHHHHHHHHH--HHHHHHHcCCC-----CCCccEEEEEcCCCChHHHHHHHHHHcCC-
Q 004867 292 ----KDVRGFIKRDE--FEQISAPILERVKRP--LEKALAETGLS-----VEDVHMVEVVGSSSRVPAIIKILTEFFGK- 357 (726)
Q Consensus 292 ----~d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~srip~v~~~l~~~fg~- 357 (726)
.+--..| +.+ +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.++.+.++.++.|+.
T Consensus 500 ~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~ 577 (607)
T 1nbw_A 500 VYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY 577 (607)
T ss_dssp EEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 0111244 455 555 55555554443 44557776542 35679999999999999999999999975
Q ss_pred CC-------CCCCCchhhhhcchHHHHH
Q 004867 358 EP-------RRTMNASECVARGCALQCA 378 (726)
Q Consensus 358 ~v-------~~~~n~~eaVa~GAa~~aa 378 (726)
++ ...-.|..|+|.|.+++.+
T Consensus 578 ~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 578 GVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp TCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred CeEEecCCccccCCchHHHHHHHHHhhh
Confidence 43 2245899999999997654
No 36
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.07 E-value=2.1e-10 Score=102.30 Aligned_cols=81 Identities=16% Similarity=0.359 Sum_probs=72.9
Q ss_pred hHHHhhHHHhhHHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHH
Q 004867 619 VMEETKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEER 697 (726)
Q Consensus 619 ~~~~~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R 697 (726)
-+|++.++||.||+|||.+|..|.+ .+...++++++++|...|+++++||+.+ .++++++|+.++++|++++.||..|
T Consensus 12 ~~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k 90 (120)
T 2p32_A 12 SGLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISK 90 (120)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3577899999999999999999963 3888999999999999999999999864 6689999999999999999999998
Q ss_pred HHh
Q 004867 698 YKE 700 (726)
Q Consensus 698 ~~e 700 (726)
++.
T Consensus 91 ~y~ 93 (120)
T 2p32_A 91 LYQ 93 (120)
T ss_dssp HCC
T ss_pred HHH
Confidence 763
No 37
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.98 E-value=5e-10 Score=98.88 Aligned_cols=78 Identities=22% Similarity=0.402 Sum_probs=69.1
Q ss_pred hhHHHhhHHHHHHHHHHHhhh-hhccCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHhh
Q 004867 623 TKDRKNAVEAYVYDMRNKLCD-KYQDFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEF 701 (726)
Q Consensus 623 ~~~akN~LEs~iy~~r~~l~~-~~~~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~ 701 (726)
+.++||.||+|||.+|..|.+ ++...+++++|++|...|+++++||+++ .++++++|++++++|++++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 568999999999999999963 6888999999999999999999999743 55789999999999999999999988753
No 38
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.78 E-value=4.5e-07 Score=92.89 Aligned_cols=72 Identities=24% Similarity=0.139 Sum_probs=53.7
Q ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHh
Q 004867 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAIL 380 (726)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~l 380 (726)
+++..+++.+...+...++..++ .+.|+++||.++.|.+++.+.+.++.++..+.+++.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 33444444444444444443221 3679999999999999999999999988888888889999999998754
No 39
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.85 E-value=3.3e-05 Score=86.33 Aligned_cols=127 Identities=19% Similarity=0.277 Sum_probs=89.8
Q ss_pred CcEEEEecCCCCHHHHHHHHHHHH-HhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCC
Q 004867 138 VDCCIGIPVYFTDLQRRAVIDAAT-IAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKG 216 (726)
Q Consensus 138 ~~~VitVPa~f~~~qR~~l~~Aa~-~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~ 216 (726)
..+++|.|+.++...|+.|.+.+- ..|++.+.++.+|.+|++++|+ ..+-+|+|+|+|+|+++.|. .|
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---------~ttGLVVDiG~g~T~VvPV~--eG 290 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---------STSTCVVNIGAAETRIACVD--EG 290 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---------SSCEEEEEECSSCEEEEEEE--TT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---------CCceEEEcCCCceEEEEEEe--CC
Confidence 469999999999999999998874 6899999999999999987753 24579999999999999873 33
Q ss_pred eEEEEEE-ecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCccc
Q 004867 217 QLKILGH-SFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAP 282 (726)
Q Consensus 217 ~~~vl~~-~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~ 282 (726)
. ++.. .....+||+++|..|.++|..+--......+. ... =+..++.+|+.++.-...+
T Consensus 291 ~--vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~--t~~---e~eiVrdIKEk~CyVs~~D 350 (655)
T 4am6_A 291 T--VLEHSAITLDYGGDDITRLFALFLLQSDFPLQDWKID--SKH---GWLLAERLKKNFTTFQDAD 350 (655)
T ss_dssp E--ECGGGCEEESCCHHHHHHHHHHHHHHTTCSCCSCCTT--SHH---HHHHHHHHHHHHCCCCGGG
T ss_pred E--EEhhheeeecchHHHHHHHHHHHHHHcCCCccccCCC--Ccc---hHHHHHHHHHheEEEcccc
Confidence 1 2211 12357999999999999887641000001111 111 1256778899887664333
No 40
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.18 E-value=0.0046 Score=63.06 Aligned_cols=75 Identities=15% Similarity=0.075 Sum_probs=53.5
Q ss_pred eCHHHHHH-HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcC-CCChHHHHHHHHHHc---CCCCCCCCCchhhhhcc
Q 004867 298 IKRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGS-SSRVPAIIKILTEFF---GKEPRRTMNASECVARG 372 (726)
Q Consensus 298 itr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~srip~v~~~l~~~f---g~~v~~~~n~~eaVa~G 372 (726)
.+++++-. ++.-+.++|..+...+.+..+ ++.|+++|| .+..|.+++.+++++ +.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 45655443 333444444444444444433 456999999 899999999999985 57788889999999999
Q ss_pred hHHHH
Q 004867 373 CALQC 377 (726)
Q Consensus 373 Aa~~a 377 (726)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 41
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.86 E-value=0.34 Score=50.41 Aligned_cols=65 Identities=14% Similarity=0.012 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc---CCCCCCCC---CchhhhhcchHHHHHHh
Q 004867 311 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAIL 380 (726)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eaVa~GAa~~aa~l 380 (726)
.+.+...+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.+++.|+|.+....
T Consensus 229 ~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 299 (330)
T 2ivn_A 229 FAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYK 299 (330)
T ss_dssp HHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHh
Confidence 3444444555554433 568999999999999999999877 54444443 34678888888765443
No 42
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.65 E-value=0.014 Score=60.51 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccch
Q 004867 153 RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR 232 (726)
Q Consensus 153 R~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~ 232 (726)
...+..+-+..|+++-.+-.|.+|...+.+.... ++ .....+|+|+|||+|.+++++ ++.+ .. ..+.++|+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~-l~--~~~~~lvvDIGGGStEl~~~~--~~~~--~~-~~Sl~~G~v 171 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYS-LK--PEGEVCVVDQGGGSTEYVFGK--GYKV--RE-VISLPIGIV 171 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHH-TC--CCSEEEEEEEETTEEEEEEEE--TTEE--EE-EEEECCCHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhh-cc--cCCCEEEEEeCCCcEEEEEEe--CCce--ee-EEEEeccHH
Confidence 3445555557899865555566665555454432 22 245799999999999999965 4433 22 235789999
Q ss_pred HHHHHH
Q 004867 233 DFDEVL 238 (726)
Q Consensus 233 ~iD~~l 238 (726)
.+.+.+
T Consensus 172 ~l~e~~ 177 (315)
T 1t6c_A 172 NLTETF 177 (315)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887765
No 43
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.61 E-value=0.009 Score=62.58 Aligned_cols=46 Identities=17% Similarity=0.068 Sum_probs=39.7
Q ss_pred ccEEEEEcC-CCChHHHHHHHHHHcC------CCCCCCCCchhhhhcchHHHH
Q 004867 332 VHMVEVVGS-SSRVPAIIKILTEFFG------KEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 332 i~~ViLvGG-~srip~v~~~l~~~fg------~~v~~~~n~~eaVa~GAa~~a 377 (726)
++.|+++|| .+..|.+++.|+..++ .++..+.+|..+-|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 446999999 8999999999999863 567778899999999999875
No 44
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.15 E-value=0.86 Score=46.43 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=35.7
Q ss_pred CccEEEEEcCCCChHHHHHHHHHHcC-CCCCCCCCchhhhhcchHHHHHH
Q 004867 331 DVHMVEVVGSSSRVPAIIKILTEFFG-KEPRRTMNASECVARGCALQCAI 379 (726)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg-~~v~~~~n~~eaVa~GAa~~aa~ 379 (726)
+.+.|+|.||.+..+.+.+.|++.+. .++..+. .+.+.++||++.+..
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 45789999998876888888887774 3555455 567889999987754
No 45
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=95.98 E-value=0.008 Score=67.81 Aligned_cols=87 Identities=9% Similarity=0.117 Sum_probs=63.1
Q ss_pred EeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHH
Q 004867 297 FIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (726)
Q Consensus 297 ~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~ 376 (726)
.-+|.++.++++.+++.+.-.++..++...-....++.|.++||+++.+.+.+++.+.||.++..+ ...|+.|+|||+.
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGAA~l 486 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGSAMM 486 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHHHHH
Confidence 347888865555666665555544444321122357899999999999999999999999988665 4568999999999
Q ss_pred HHHhCCCC
Q 004867 377 CAILSPTF 384 (726)
Q Consensus 377 aa~ls~~~ 384 (726)
|+.-.+.+
T Consensus 487 A~~a~G~~ 494 (554)
T 3l0q_A 487 GTVAAGVF 494 (554)
T ss_dssp HHHHTTSS
T ss_pred HHHHcCCc
Confidence 98765543
No 46
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=95.84 E-value=0.01 Score=66.64 Aligned_cols=76 Identities=13% Similarity=0.129 Sum_probs=59.1
Q ss_pred HHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHh
Q 004867 304 EQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAIL 380 (726)
Q Consensus 304 e~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~l 380 (726)
..+++.+++.+.-.++..++..+.....++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a 482 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHG 482 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHH
Confidence 44555666666666666666655444567899999999999999999999999988654 45789999999998753
No 47
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.82 E-value=1.2 Score=45.53 Aligned_cols=44 Identities=14% Similarity=0.144 Sum_probs=29.3
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++-....... ...+++++-+|.| .-.+++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAAQ---GEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCCC---CCCCEEEEEECCc-eeEEEE
Confidence 4665 789999999998765432211 2467888888887 444443
No 48
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=95.77 E-value=0.0083 Score=66.49 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=54.9
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHH
Q 004867 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa 378 (726)
+|.++ ++.+++.+.-.++.+++........++.|.++||+++.+.+.+++.+.+|.++......+.+.|+|||+.|+
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~ 433 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQ 433 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHH
Confidence 45554 333444444333333333211123467899999999999999999999999987765555458999999987
Q ss_pred HhCC
Q 004867 379 ILSP 382 (726)
Q Consensus 379 ~ls~ 382 (726)
.-.+
T Consensus 434 ~~~g 437 (484)
T 2itm_A 434 IAAN 437 (484)
T ss_dssp HHHC
T ss_pred HHcC
Confidence 6443
No 49
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=95.73 E-value=0.72 Score=47.66 Aligned_cols=44 Identities=18% Similarity=0.219 Sum_probs=30.5
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++....... ....+++++-+|.| .-.+++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~---~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAG---QGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCC---CCCCCEEEEEeCcc-eEEEEE
Confidence 4775 78999999999876443221 12567888999988 555554
No 50
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=95.67 E-value=0.011 Score=66.02 Aligned_cols=79 Identities=20% Similarity=0.245 Sum_probs=58.2
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCC-CCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEP-RRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v-~~~~n~~eaVa~GAa~~a 377 (726)
+|.+| ++.+++.+.-.++.+++.... .. ++.|.++||+++.+.+.+++.+.||.++ ..+ .+.|+.|+|||+.|
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKP-DAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECC-CGGGHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEec-CCCCchHHHHHHHH
Confidence 45554 444555555444444444322 23 7899999999999999999999999988 554 58899999999999
Q ss_pred HHhCCC
Q 004867 378 AILSPT 383 (726)
Q Consensus 378 a~ls~~ 383 (726)
+.-.+.
T Consensus 449 ~~a~G~ 454 (511)
T 3hz6_A 449 AVELEW 454 (511)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 876544
No 51
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=95.65 E-value=0.011 Score=65.58 Aligned_cols=79 Identities=15% Similarity=0.244 Sum_probs=57.9
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHH
Q 004867 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa 378 (726)
+|.++ ++.+++.+.-.++.+++...... .++.|.++||+++.+.+.+++.+.+|.++..+. ..|+.|+|||+.|+
T Consensus 365 ~~~~l---~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~ 439 (497)
T 2zf5_O 365 GREHL---ARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAG 439 (497)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHH
Confidence 45544 44555555555555555543222 578899999999999999999999999886554 45699999999998
Q ss_pred HhCC
Q 004867 379 ILSP 382 (726)
Q Consensus 379 ~ls~ 382 (726)
.-.+
T Consensus 440 ~~~g 443 (497)
T 2zf5_O 440 LAVD 443 (497)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 6554
No 52
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=95.62 E-value=0.012 Score=65.54 Aligned_cols=78 Identities=8% Similarity=0.066 Sum_probs=56.2
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHHH---HHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHH
Q 004867 299 KRDEFEQISAPILERVKRPLEKAL---AETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (726)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l---~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~ 375 (726)
+|.+|- +.+++.+.-.++..+ ++.+ ..++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+
T Consensus 364 ~~~~l~---RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~ 436 (504)
T 3ll3_A 364 QKPEMA---RAVIEGIIFNLYDAASNLIKNT---KKPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMF 436 (504)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHHTTS---CCCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHcC---CCCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHH
Confidence 465543 444444443333333 3333 258899999999999999999999999988664 456799999999
Q ss_pred HHHHhCCC
Q 004867 376 QCAILSPT 383 (726)
Q Consensus 376 ~aa~ls~~ 383 (726)
.|+.-.+.
T Consensus 437 lA~~a~G~ 444 (504)
T 3ll3_A 437 LARQALGL 444 (504)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCc
Confidence 99865543
No 53
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=95.45 E-value=0.011 Score=65.97 Aligned_cols=78 Identities=22% Similarity=0.331 Sum_probs=54.6
Q ss_pred CHHHHHHH-HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.++-+. ++.+.-.+...++ .|++.+. .++.|.++||+++.|.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 56654432 2233333333333 3444454 47899999999999999999999999988654 45678999999999
Q ss_pred HHhC
Q 004867 378 AILS 381 (726)
Q Consensus 378 a~ls 381 (726)
+.-.
T Consensus 470 ~~a~ 473 (515)
T 3i8b_A 470 AWVL 473 (515)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 8543
No 54
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.45 E-value=2.9 Score=43.37 Aligned_cols=62 Identities=6% Similarity=-0.075 Sum_probs=42.0
Q ss_pred CcCcEEEEecCCCCHHHHHHHHHHHHHh-C--CCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeE
Q 004867 136 AVVDCCIGIPVYFTDLQRRAVIDAATIA-G--LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQ 207 (726)
Q Consensus 136 ~~~~~VitVPa~f~~~qR~~l~~Aa~~A-G--l~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~d 207 (726)
.+..+.|++|...+......+.+..+.. | ...+.+.|+..|+|+++ . ....+++=+|-|.--
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~---------~~~~v~v~~GTGig~ 134 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T---------PDGGVVLISGTGSNC 134 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C---------SSCEEEEEESSSEEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C---------CCCcEEEEEcCCcee
Confidence 4677999999999877666666666544 3 13578999999999873 2 123455556666433
No 55
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.41 E-value=2 Score=44.43 Aligned_cols=44 Identities=14% Similarity=0.112 Sum_probs=29.9
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| .-.+++
T Consensus 120 ~~~p-V~v~NDa~aaalgE~~~g~~---~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 120 IGRS-VKIENDANCFALSEAWDEEL---QDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HSSC-CEEEEHHHHHHHHHHTSTTT---TTCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecchhHHHHHHHHhCCC---CCCCcEEEEEeCcc-ceEEEE
Confidence 4776 78999999999876543221 13567888888887 444554
No 56
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.13 E-value=0.023 Score=63.54 Aligned_cols=82 Identities=17% Similarity=0.293 Sum_probs=57.6
Q ss_pred CHHHHHHH-HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.++-+. ++.+.-.+...++.+-+..|. .++.|.++||+++.+.+.+++.+.||.++..+ ...|+.|+|||+.|
T Consensus 372 ~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~lA 447 (526)
T 3ezw_A 372 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 447 (526)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHHH
Confidence 55554432 223333334444443334554 47889999999999999999999999988655 45688999999999
Q ss_pred HHhCCCC
Q 004867 378 AILSPTF 384 (726)
Q Consensus 378 a~ls~~~ 384 (726)
+.-.+.+
T Consensus 448 ~~a~G~~ 454 (526)
T 3ezw_A 448 GLAVGFW 454 (526)
T ss_dssp HHHTTSS
T ss_pred HHHhCCC
Confidence 8765543
No 57
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=95.10 E-value=0.016 Score=65.67 Aligned_cols=80 Identities=15% Similarity=0.183 Sum_probs=55.7
Q ss_pred CHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCC-ChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.+| ++-+++.+.-.++.+++...-....++.|.++||++ +.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 485 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMFA 485 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHHH
Confidence 56654 444444444333333332211223578999999999 99999999999999988654 46789999999999
Q ss_pred HHhCC
Q 004867 378 AILSP 382 (726)
Q Consensus 378 a~ls~ 382 (726)
+.-.+
T Consensus 486 ~~a~G 490 (572)
T 3jvp_A 486 SVAAG 490 (572)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 86443
No 58
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=94.99 E-value=0.031 Score=62.17 Aligned_cols=80 Identities=16% Similarity=0.251 Sum_probs=56.7
Q ss_pred CHHHHHH-HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.++-+ +++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 5665544 3334444444444443333453 36889999999999999999999999988655 45679999999999
Q ss_pred HHhCC
Q 004867 378 AILSP 382 (726)
Q Consensus 378 a~ls~ 382 (726)
+.-.+
T Consensus 449 ~~~~G 453 (504)
T 2d4w_A 449 GIAVG 453 (504)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86544
No 59
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=94.89 E-value=0.021 Score=63.54 Aligned_cols=82 Identities=16% Similarity=0.299 Sum_probs=56.9
Q ss_pred CHHHHHHH-HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.+|-+. ++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 46554432 233333334444333233454 47889999999999999999999999988554 46789999999999
Q ss_pred HHhCCCC
Q 004867 378 AILSPTF 384 (726)
Q Consensus 378 a~ls~~~ 384 (726)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8765543
No 60
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=94.88 E-value=3.5 Score=41.64 Aligned_cols=42 Identities=19% Similarity=0.188 Sum_probs=28.7
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++... ... ...+++++-+|.| .-.+++
T Consensus 94 ~~~p-v~v~NDa~aaa~~e~~-~~~----~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 94 YQLP-VHLENDANCVGLSELL-AHP----ELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GCCC-EEEEEHHHHHHHHHHH-HCT----TCSSEEEEEESSS-EEEEEE
T ss_pred cCCC-EEEechHHHHHHHHHH-hcC----CCCeEEEEEECCc-eEEEEE
Confidence 4665 7899999999987644 111 2467888889887 445554
No 61
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=94.88 E-value=0.015 Score=64.79 Aligned_cols=80 Identities=14% Similarity=0.123 Sum_probs=55.8
Q ss_pred CHHHHHHH-HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.+|-+. ++.+.-.+...++ .|++.+. .++.|.++||+++.+.+.+++.+.||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 56655432 2233333333333 3344454 4788999999999999999999999998866643 568899999999
Q ss_pred HHhCCC
Q 004867 378 AILSPT 383 (726)
Q Consensus 378 a~ls~~ 383 (726)
+.-.+.
T Consensus 446 ~~a~G~ 451 (508)
T 3ifr_A 446 AIGGGD 451 (508)
T ss_dssp HHHTCS
T ss_pred HHHhCC
Confidence 875543
No 62
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=94.80 E-value=0.014 Score=65.18 Aligned_cols=52 Identities=15% Similarity=0.121 Sum_probs=43.4
Q ss_pred CccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHHhCCC
Q 004867 331 DVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQCAILSPT 383 (726)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ls~~ 383 (726)
.++.|.++||+++.|.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+.
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~ 476 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGV 476 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCC
Confidence 47889999999999999999999999988654 45779999999999865443
No 63
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=94.79 E-value=0.032 Score=61.96 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=54.2
Q ss_pred CHHHHHH-HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.++-+ +++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 4555433 3333333334444332222233 46789999999999999999999999988655 45679999999998
Q ss_pred HHhCC
Q 004867 378 AILSP 382 (726)
Q Consensus 378 a~ls~ 382 (726)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 76443
No 64
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.70 E-value=1 Score=45.97 Aligned_cols=49 Identities=12% Similarity=0.116 Sum_probs=34.7
Q ss_pred CccEEEEEcCCCChHHHHHHHHHHcCC------CCCCCCCchhhhhcchHHHHHH
Q 004867 331 DVHMVEVVGSSSRVPAIIKILTEFFGK------EPRRTMNASECVARGCALQCAI 379 (726)
Q Consensus 331 ~i~~ViLvGG~srip~v~~~l~~~fg~------~v~~~~n~~eaVa~GAa~~aa~ 379 (726)
+++.|+|-||.+..+.+.+.|++.+.. ++....-.+.+.++|||.++..
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 457899999998877777777777642 1223334567899999987754
No 65
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=94.64 E-value=0.024 Score=63.05 Aligned_cols=82 Identities=13% Similarity=0.317 Sum_probs=57.0
Q ss_pred CHHHHHHH-HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.+|-+. ++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 448 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLA 448 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHH
Confidence 56655432 233333344444433222454 47889999999999999999999999988654 46789999999999
Q ss_pred HHhCCCC
Q 004867 378 AILSPTF 384 (726)
Q Consensus 378 a~ls~~~ 384 (726)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (506)
T 3h3n_X 449 GLAVGFW 455 (506)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8765543
No 66
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=94.61 E-value=0.018 Score=64.10 Aligned_cols=81 Identities=17% Similarity=0.281 Sum_probs=55.6
Q ss_pred CHHHHHHH-HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 299 KRDEFEQI-SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 299 tr~efe~l-~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+|.++-+. ++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHH
Confidence 46555432 233333334444333222354 47889999999999999999999999988654 46679999999999
Q ss_pred HHhCCC
Q 004867 378 AILSPT 383 (726)
Q Consensus 378 a~ls~~ 383 (726)
+.-.+.
T Consensus 447 ~~a~G~ 452 (510)
T 2p3r_A 447 GLAVGF 452 (510)
T ss_dssp HHHHTS
T ss_pred HHHhCc
Confidence 865443
No 67
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=94.51 E-value=0.18 Score=52.35 Aligned_cols=48 Identities=13% Similarity=0.002 Sum_probs=32.3
Q ss_pred CccEEEEEcCCCCh-HHHHHHHHHHcC----------CCCCCCCCchhhhhcchHHHHH
Q 004867 331 DVHMVEVVGSSSRV-PAIIKILTEFFG----------KEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 331 ~i~~ViLvGG~sri-p~v~~~l~~~fg----------~~v~~~~n~~eaVa~GAa~~aa 378 (726)
+++.|+|-||.++. +.+.+.|++.+. .++......+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 45789999998876 666555554431 2234444567899999998763
No 68
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=94.51 E-value=0.046 Score=60.77 Aligned_cols=81 Identities=10% Similarity=0.242 Sum_probs=56.3
Q ss_pred CHHHHHH-HHhHHHHHHHHHHHHHHHHcCCCCCCc-cEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHH
Q 004867 299 KRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDV-HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQ 376 (726)
Q Consensus 299 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i-~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~ 376 (726)
+|.++-+ +++.+.-.+...++.+-+..+. .+ +.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 4555443 3334444444444443232353 35 779999999999999999999999988654 4556999999999
Q ss_pred HHHhCCC
Q 004867 377 CAILSPT 383 (726)
Q Consensus 377 aa~ls~~ 383 (726)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9875543
No 69
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=94.13 E-value=4.3 Score=41.62 Aligned_cols=44 Identities=18% Similarity=0.263 Sum_probs=29.9
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++........ ...+++++-+|.| .-.+++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~---~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGE---NNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCC---CCCcEEEEEECCc-eEEEEE
Confidence 4765 789999999998754332111 2467888899988 555554
No 70
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=93.76 E-value=0.041 Score=60.96 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=52.8
Q ss_pred EeCHHHHHH-HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHH
Q 004867 297 FIKRDEFEQ-ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCAL 375 (726)
Q Consensus 297 ~itr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~ 375 (726)
.-+|.+|-+ +++.+.-.+...++.+-+..+. .++.|.++||+++.+.+.+++.+.||.++.... .|+.|+|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 346666544 2333333444444433222343 468899999999999999999999999886543 5899999966
Q ss_pred HHHH
Q 004867 376 QCAI 379 (726)
Q Consensus 376 ~aa~ 379 (726)
.|+.
T Consensus 436 ~A~~ 439 (489)
T 2uyt_A 436 IQLM 439 (489)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 71
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=92.85 E-value=0.2 Score=51.84 Aligned_cols=79 Identities=15% Similarity=0.198 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccch
Q 004867 153 RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR 232 (726)
Q Consensus 153 R~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~ 232 (726)
...+..+-+..|+++--+=.|-+|...+.+.... ++. .....+|+|+|||+|.+++++ ++.+ ... .+.++|.-
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~-~~~-~~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~v 164 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQA-VPM-EDHISLAMDIGGGSVEFIIGN--KNEI--LWK-QSFEIGGQ 164 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH-SCC-TTCCEEEEEECSSCEEEEEEC--SSCE--EEE-EEESCCHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhc-CCC-CCCCEEEEEeCCCceEEEEEE--CCeE--eee-EEEechhh
Confidence 4455566666899854444455555444444332 221 246799999999999999975 3322 222 25788988
Q ss_pred HHHHHH
Q 004867 233 DFDEVL 238 (726)
Q Consensus 233 ~iD~~l 238 (726)
.+.+.+
T Consensus 165 rl~e~f 170 (315)
T 3mdq_A 165 RLIDRF 170 (315)
T ss_dssp HHHHHS
T ss_pred HHHHHh
Confidence 777643
No 72
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=92.18 E-value=5.1 Score=42.61 Aligned_cols=44 Identities=18% Similarity=0.284 Sum_probs=29.7
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++........ ...+++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASR---GARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCC---CCCcEEEEEECCc-EEEEEE
Confidence 4765 789999999998764432211 2467888889887 445554
No 73
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=91.82 E-value=3.7 Score=43.33 Aligned_cols=245 Identities=10% Similarity=0.094 Sum_probs=0.0
Q ss_pred EEEEEcCccceEEEEEECCceEEEeCCCCCcccceEEEEcCCceeecHhhHhhhhcCccchHHHHHHhhccCCCCHHHHH
Q 004867 3 VVGFDLGNESCIVAVARQRGIDVVLNDESKRETPSIVCFGDKQRFIGTAGAASSTMNPKNSISQIKRLIGRQFSDPELQR 82 (726)
Q Consensus 3 vvGID~GTt~s~va~~~~~~~~ii~n~~g~~~~PS~V~~~~~~~~~G~~A~~~~~~~p~~~~~~~K~llg~~~~~~~~~~ 82 (726)
++|||+|.|++++++++.
T Consensus 89 ~lGIDiGgt~i~~~l~d~-------------------------------------------------------------- 106 (380)
T 2hoe_A 89 VLGIEVTRDEIAACLIDA-------------------------------------------------------------- 106 (380)
T ss_dssp EEEEEECSSEEEEEEEET--------------------------------------------------------------
T ss_pred EEEEEECCCEEEEEEECC--------------------------------------------------------------
Q ss_pred hhccCCceEEeCCCCceEEEEEEcCceeEEcHHHHHHHHHHHHHHHHHHhc--CCCcCcEEEEecCCCCH----------
Q 004867 83 DLKSLPFAVTEGPDGYPLIHARYLGETRVFTPTQVLGMLLSNLKAIAESNL--NAAVVDCCIGIPVYFTD---------- 150 (726)
Q Consensus 83 ~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~eel~a~~L~~l~~~a~~~~--~~~~~~~VitVPa~f~~---------- 150 (726)
+|.+.....+...... ++++++..+...+.+.....- ...+..+.|++|...+.
T Consensus 107 -------------~G~vl~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~~~ 172 (380)
T 2hoe_A 107 -------------SMNILAHEAHPLPSQS-DREETLNVMYRIIDRAKDMMEKLGSKLSALTVAAPGPIDTERGIIIDPRN 172 (380)
T ss_dssp -------------TCCEEEEEEEECCSSC-CHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEESSCEETTTTEECCCSS
T ss_pred -------------CCCEEEEEEEccCCCC-CHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEEeeccEECCCCEEeccCC
Q ss_pred ------HHHHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEe
Q 004867 151 ------LQRRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHS 224 (726)
Q Consensus 151 ------~qR~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~ 224 (726)
.-+..+.+.. |++ +.+.|+..|+|++....... . .+++++-+|.| +..--+.++.+--=...
T Consensus 173 l~w~~~~l~~~l~~~~---~~p-V~v~NDanaaalaE~~~g~~----~-~~~v~l~~GtG---iG~giv~~G~l~~G~~g 240 (380)
T 2hoe_A 173 FPLSQIPLANLLKEKY---GIE-VWVENDADMGAVGEKWYTKR----D-DSFAWILTGKG---IGAGIIIDGELYRGENG 240 (380)
T ss_dssp CTTBTSCHHHHHHHHH---CSE-EEEEEHHHHHHHHHHHHTTC----C-SCEEEEEESSS---CEEEEEETTEECCCSSS
T ss_pred CCCcCCChHHHHHHHh---CCC-EEEechHHHHHHHHHHhCCC----C-CcEEEEEeCCc---eEEEEEECCEEeccCCC
Q ss_pred cCCCccchHHH----------HHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCcce
Q 004867 225 FDRSVGGRDFD----------EVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEKDV 294 (726)
Q Consensus 225 ~~~~lGG~~iD----------~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~d~ 294 (726)
....+|=..++ -.+-.++...-... ..+.+..-..-
T Consensus 241 ~aGEiGh~~v~~~~~c~cG~~gclE~~~s~~~l~~----------------------------------~~~~v~~~a~~ 286 (380)
T 2hoe_A 241 YAGEIGYTRVFNGNEYVFLEDVCNENVVLKHVLSM----------------------------------GFSSLAEARDS 286 (380)
T ss_dssp CCCCGGGCEEECSSSEEEHHHHHCHHHHHHHHHHH----------------------------------CCC-TTHHHHT
T ss_pred ccccccceEecCCCCCCCCCccHHHHHcCHHHHHH----------------------------------HHHHHHHHHHC
Q ss_pred EEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCCh-HHHHHHHHHHc--------CCCCCCCCCc
Q 004867 295 RGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRV-PAIIKILTEFF--------GKEPRRTMNA 365 (726)
Q Consensus 295 ~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sri-p~v~~~l~~~f--------g~~v~~~~n~ 365 (726)
.-..-++-+++.+..+-.-+..++.-. +++.|+|.||.+.. |.+.+.+++.+ ..++....-.
T Consensus 287 gD~~a~~~l~~~~~~La~~i~~l~~~l---------dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~ 357 (380)
T 2hoe_A 287 GDVRVKEYFDDIARYFSIGLLNLIHLF---------GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQ 357 (380)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHH---------CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHh---------CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCC
Q ss_pred hhhhhcchHHHHH
Q 004867 366 SECVARGCALQCA 378 (726)
Q Consensus 366 ~eaVa~GAa~~aa 378 (726)
+.+.++|||..+.
T Consensus 358 ~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 358 EPVIAFGAAVHAL 370 (380)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
No 74
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=91.50 E-value=0.16 Score=55.99 Aligned_cols=72 Identities=13% Similarity=0.010 Sum_probs=53.8
Q ss_pred HHHHhHHHHH--HHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHH-cCCCCCCCCCchhhhhcchHHHHHHh
Q 004867 304 EQISAPILER--VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEF-FGKEPRRTMNASECVARGCALQCAIL 380 (726)
Q Consensus 304 e~l~~~~~~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~-fg~~v~~~~n~~eaVa~GAa~~aa~l 380 (726)
..+++.+++. +.-.++.+++... ..+.|.++||+++.|.+.+++.+. ||.++..+. ..|+.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 4455555553 4445555665543 227899999999999999999999 999886664 4578899999999753
No 75
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=91.01 E-value=0.57 Score=48.99 Aligned_cols=81 Identities=21% Similarity=0.318 Sum_probs=49.1
Q ss_pred HHHHHHHHHHhCCCceeeechhHHHHHHh-hhhcCCCCC-CCCceEEEEEeCCceeEEEEEEe--eC--CeEEEEEEecC
Q 004867 153 RRAVIDAATIAGLHPLRLFHETTATALAY-GIYKTDLPE-NDQLNVAFVDIGHASLQVCIAGF--KK--GQLKILGHSFD 226 (726)
Q Consensus 153 R~~l~~Aa~~AGl~~~~li~Ep~AaAl~y-~~~~~~~~~-~~~~~vlv~D~Gggt~dvsvv~~--~~--~~~~vl~~~~~ 226 (726)
...+..+-+..|+++ .+|+-.+=|.+.| +... .++. .....++|+|+|||+|+++++.- .. +.+ .. ...
T Consensus 105 ~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~--~~-~~S 179 (343)
T 3cer_A 105 EEFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQV--QG-AFS 179 (343)
T ss_dssp HHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSC--SE-EEE
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccccccCCEEEEEeCCCceEEEEeecCccCccccc--ce-eEE
Confidence 345555556679985 5666554444444 4432 2221 02356999999999999999754 21 111 11 225
Q ss_pred CCccchHHHHHH
Q 004867 227 RSVGGRDFDEVL 238 (726)
Q Consensus 227 ~~lGG~~iD~~l 238 (726)
.++|+..+.+.+
T Consensus 180 lplG~v~lt~~~ 191 (343)
T 3cer_A 180 MNIGSVRMTERH 191 (343)
T ss_dssp ESCCHHHHHHHT
T ss_pred EehhHHHHHHHh
Confidence 689999888765
No 76
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=90.64 E-value=17 Score=37.46 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc---CCCCCCCC---CchhhhhcchHHHHHHhC
Q 004867 310 ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAILS 381 (726)
Q Consensus 310 ~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eaVa~GAa~~aa~ls 381 (726)
+.+.+...+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+. -.|.+++.|+|.+.....
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 305 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKS 305 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHc
Confidence 44445555666666554 578999999999999999999887 54443332 357889999987665444
No 77
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=87.99 E-value=1.5 Score=48.40 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=46.9
Q ss_pred HHHHHHHHHhCCCceeeechhHHHHHHh-hhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCccch
Q 004867 154 RAVIDAATIAGLHPLRLFHETTATALAY-GIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVGGR 232 (726)
Q Consensus 154 ~~l~~Aa~~AGl~~~~li~Ep~AaAl~y-~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lGG~ 232 (726)
..+..+-+..|+++ .+|+..+=|.+.| |+... ++. ....+|+|+|||+|.+++.+ ++.+ ... .+.++|.-
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~-~~~--~~~~lviDIGGGStEl~~~~--~~~~--~~~-~Sl~lG~v 170 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHT-QPE--KGRKLVIDIGGGSTELVIGE--NFEP--ILV-ESRRMGCV 170 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHH-SCC--CSCEEEEEECSSCEEEEEEE--TTEE--EEE-EEESCCHH
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhh-ccC--CCCEEEEEECCCcEEEEEEe--CCee--eEE-EEEeccHH
Confidence 34444445569874 5666554444444 44332 221 23699999999999999863 4433 222 25789998
Q ss_pred HHHHHH
Q 004867 233 DFDEVL 238 (726)
Q Consensus 233 ~iD~~l 238 (726)
.+.+.+
T Consensus 171 rlte~f 176 (513)
T 1u6z_A 171 SFAQLY 176 (513)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 887665
No 78
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=87.62 E-value=25 Score=35.40 Aligned_cols=63 Identities=11% Similarity=0.004 Sum_probs=39.4
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCC--hHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHH
Q 004867 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSR--VPAIIKILTEFFGKEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr--ip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa 378 (726)
+..++++....+-..+...-. . +.+.|+|.||.+. .|.+.+.+++.+ . -|+.+.+.||++++.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i----~---~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL----V---APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC----C---CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc----c---CCCCCHHHHHHHHHh
Confidence 445555555555555554322 2 5678999998764 466666666652 1 145677899998764
No 79
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=84.17 E-value=3.3 Score=45.69 Aligned_cols=76 Identities=21% Similarity=0.216 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhCCCceeeec-hhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCcc
Q 004867 152 QRRAVIDAATIAGLHPLRLFH-ETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVG 230 (726)
Q Consensus 152 qR~~l~~Aa~~AGl~~~~li~-Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lG 230 (726)
....+..+-+..|+++ .+|+ +-+|...+.|+... ++ ....+|+|+|||+|.+++++ ++.+ . ...+.++|
T Consensus 102 ~~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~---~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~lG 171 (508)
T 3hi0_A 102 GPDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY---QPDGIAGDLGGGSLELIDIK--DKSC--G-EGITLPLG 171 (508)
T ss_dssp HHHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS---SCEEEEEEECSSCEEEEEEE--TTEE--C-CCEEESCC
T ss_pred HHHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC---CCCeEEEEeCCCceEEEEee--CCee--e-eEEEecce
Confidence 3445666666789985 5665 44554444454332 23 23459999999999999975 3332 2 22256788
Q ss_pred chHHHHH
Q 004867 231 GRDFDEV 237 (726)
Q Consensus 231 G~~iD~~ 237 (726)
.-.+.+.
T Consensus 172 ~vrl~e~ 178 (508)
T 3hi0_A 172 GLRLSEQ 178 (508)
T ss_dssp HHHHHHH
T ss_pred EEehhhc
Confidence 8877753
No 80
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=82.83 E-value=0.81 Score=38.22 Aligned_cols=21 Identities=29% Similarity=0.384 Sum_probs=18.7
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 004867 1 MSVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~~ 21 (726)
|.++|||||+..+.+|+..+.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999997653
No 81
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=82.58 E-value=63 Score=35.56 Aligned_cols=184 Identities=13% Similarity=0.095 Sum_probs=91.4
Q ss_pred CcCcEEEEe-cCCCCHHHHHHH--HHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEE
Q 004867 136 AVVDCCIGI-PVYFTDLQRRAV--IDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (726)
Q Consensus 136 ~~~~~VitV-Pa~f~~~qR~~l--~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 212 (726)
.+.-+++|. |.+|+....... +.-|...|.+.+. ++--.|=+++..... ... .+ +++-+.||+|.+-.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~-~~~--~p---~~l~vsGg~t~~~~-- 142 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTT-EAE--DP---LTLYVSGGNTQVIA-- 142 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHS-SCS--SC---EEEEECSSCEEEEE--
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhc-CCC--CC---cEEEEcCCCcEEEE--
Confidence 455666776 777765432221 1223334665443 454444443322222 121 23 66666778887654
Q ss_pred eeCCeEEEEEEecCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCCc
Q 004867 213 FKKGQLKILGHSFDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEKLKKVLSANPEAPLNIECLMEEK 292 (726)
Q Consensus 213 ~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~~ 292 (726)
+..+.+++++..-|. --|+.||..=. . .++.....+ .|...|...... +.++....+.
T Consensus 143 ~~~~~~~~lg~t~d~-s~G~~~D~~a~-----~----lgl~~~gg~----~ie~lA~~g~~~--------~~~p~~~~~~ 200 (540)
T 3en9_A 143 YVSKKYRVFGETLDI-AVGNCLDQFAR-----Y----VNLPHPGGP----YIEELARKGKKL--------VDLPYTVKGM 200 (540)
T ss_dssp EETTEEEEEEEBSSS-CHHHHHHHHHH-----H----TTCCSSCHH----HHHHHHHTCCCC--------CCCCCCEETT
T ss_pred EeCCceEEEeeccch-HhHHHHHHHHH-----H----cCCCCCCHH----HHHHHHHcCCcc--------CcCCCCCCCc
Confidence 446889999887544 44666664321 1 233322212 222222222110 1111111122
Q ss_pred ceEEE-------------eCHHHHHHHHh-HHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc
Q 004867 293 DVRGF-------------IKRDEFEQISA-PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF 355 (726)
Q Consensus 293 d~~~~-------------itr~efe~l~~-~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f 355 (726)
+|++. .+..++...++ .+++-+...+.++++..+ ++.|+|+||.+....+++.|.+.+
T Consensus 201 ~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 201 DIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp EECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred ceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 22110 11223322222 234444455566666654 568999999999999999999877
No 82
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=81.20 E-value=20 Score=38.89 Aligned_cols=59 Identities=12% Similarity=-0.036 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHhCCC--ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEee
Q 004867 149 TDLQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGFK 214 (726)
Q Consensus 149 ~~~qR~~l~~Aa~~AGl~--~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 214 (726)
...-.+.+.+|.+.-|++ ++.++|+.+|++++..... +..++-+=+|-|+=-+.+....
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-------~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-------PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-------TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-------CCcEEEEEEecCcceEEEeecc
Confidence 456677899999888886 4789999999999876541 4566666778887666666543
No 83
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=76.65 E-value=5.5 Score=43.12 Aligned_cols=56 Identities=11% Similarity=-0.067 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHhCCC--ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 004867 151 LQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (726)
Q Consensus 151 ~qR~~l~~Aa~~AGl~--~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~ 213 (726)
.-++.|.++...-|++ ++.++|+..|++++-... ...+++.+=+|-|+=-.-+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~-------~~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYT-------DAXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHH-------CTTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhc-------CCccEEEEEECcEEEEEEEECC
Confidence 5567778887666765 589999999999987652 2457777778888666666554
No 84
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=76.10 E-value=33 Score=38.06 Aligned_cols=77 Identities=16% Similarity=0.059 Sum_probs=51.1
Q ss_pred HHHHHHHhH-HHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCC-CCCC-CCCchhhhhcchHHHH
Q 004867 301 DEFEQISAP-ILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK-EPRR-TMNASECVARGCALQC 377 (726)
Q Consensus 301 ~efe~l~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~-~v~~-~~n~~eaVa~GAa~~a 377 (726)
.++...++. +.+-+...+..+.+..+ ++.|.|.||.+....+++.|.+..+. .+.. +.--|.++++|+|+++
T Consensus 281 ~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a 355 (576)
T 3ven_A 281 RDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAV 355 (576)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHH
Confidence 444433333 33334445555555543 67899999999999999999876553 2222 2356889999999998
Q ss_pred HHhCC
Q 004867 378 AILSP 382 (726)
Q Consensus 378 a~ls~ 382 (726)
....+
T Consensus 356 ~~~~g 360 (576)
T 3ven_A 356 AVELG 360 (576)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 77643
No 85
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=74.79 E-value=5.9 Score=45.86 Aligned_cols=63 Identities=19% Similarity=0.183 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc---CCCCCCCC---CchhhhhcchHHHHHHhC
Q 004867 314 VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRRTM---NASECVARGCALQCAILS 381 (726)
Q Consensus 314 i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~~~---n~~eaVa~GAa~~aa~ls 381 (726)
+.+.+..+.+..+ ++.|+|.||......+++.|.+.+ |.++..+. --|..+|+|.|++|+..-
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 3444555555443 567999999999999999999987 44554432 238899999999887643
No 86
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=74.67 E-value=3.5 Score=43.11 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=17.5
Q ss_pred CceEEEEEeCCceeEEEEEE
Q 004867 193 QLNVAFVDIGHASLQVCIAG 212 (726)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~ 212 (726)
..+++|+|+|||+|.+++..
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 45799999999999999873
No 87
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=74.20 E-value=27 Score=35.33 Aligned_cols=51 Identities=12% Similarity=0.178 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 153 RRAVIDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 153 R~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
++.+.+. .|++ +.+.|+..|+|++-...... ...++++++-+|.| .-.+++
T Consensus 90 ~~~l~~~---~~~p-V~v~NDanaaalaE~~~G~~---~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 90 LQTVXNE---MXIP-VGFSTDVNAAALGEFLFGEA---XGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTT---TTCSCEEEEEESSS-EEEEEE
T ss_pred HHHHHHH---hCCC-EEEechhHHHHHHHHHhCCC---CCCCcEEEEEECCc-eEEEEE
Confidence 3444443 3775 78999999999876543221 12467888888876 444444
No 88
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=73.80 E-value=1.7 Score=39.37 Aligned_cols=21 Identities=29% Similarity=0.588 Sum_probs=18.2
Q ss_pred CeEEEEEcCccceEEEEEECC
Q 004867 1 MSVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~~ 21 (726)
|.++|||+|+..+.+|+....
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999997653
No 89
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=73.71 E-value=37 Score=34.53 Aligned_cols=44 Identities=14% Similarity=0.009 Sum_probs=29.0
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++....... ....+++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~---~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF---TQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG---GGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC---CCCCcEEEEEECCc-EEEEEE
Confidence 4665 78999999999875432111 12467888889988 445544
No 90
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=66.86 E-value=86 Score=31.95 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=29.4
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++........ ...+++++-+|.| .-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~---~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGK---GLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTT---TCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCC-EEEEEE
Confidence 4765 789999999998764432111 2467888888887 445554
No 91
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=66.03 E-value=45 Score=35.42 Aligned_cols=44 Identities=30% Similarity=0.348 Sum_probs=29.8
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++........ ...+++++-+|.| .-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~---~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQ---DVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTT---TCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCC---CCCcEEEEEECCc-EEEEEE
Confidence 4765 789999999998764432211 2467888888887 445554
No 92
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=64.61 E-value=10 Score=41.06 Aligned_cols=20 Identities=25% Similarity=0.341 Sum_probs=17.3
Q ss_pred CceEEEEEeCCceeEEEEEE
Q 004867 193 QLNVAFVDIGHASLQVCIAG 212 (726)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~ 212 (726)
...++|+|+|||+|.+++..
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 93
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=64.38 E-value=16 Score=41.20 Aligned_cols=64 Identities=6% Similarity=0.017 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc-CCCCC---CCCCchhhhhcchHHHHHH
Q 004867 311 LERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF-GKEPR---RTMNASECVARGCALQCAI 379 (726)
Q Consensus 311 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f-g~~v~---~~~n~~eaVa~GAa~~aa~ 379 (726)
++.+.+.+.++.+.. .++.|+|+||.+....+++.|.+.+ |.++. ...--|.++|+|.|+.|+.
T Consensus 584 a~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 584 AQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 333444444444443 4678999999999999999999988 54332 2334589999999998864
No 94
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=64.05 E-value=6.7 Score=35.73 Aligned_cols=19 Identities=26% Similarity=0.370 Sum_probs=17.4
Q ss_pred CeEEEEEcCccceEEEEEE
Q 004867 1 MSVVGFDLGNESCIVAVAR 19 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~ 19 (726)
|.|+|||-|++++..++..
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999875
No 95
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=60.51 E-value=6.4 Score=34.99 Aligned_cols=20 Identities=35% Similarity=0.572 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
.++|||||+..+.+|+..+.
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 48999999999999998764
No 96
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=60.19 E-value=21 Score=41.10 Aligned_cols=62 Identities=19% Similarity=0.149 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHc---CCCCCC---CCCchhhhhcchHHHHHHh
Q 004867 314 VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFF---GKEPRR---TMNASECVARGCALQCAIL 380 (726)
Q Consensus 314 i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~f---g~~v~~---~~n~~eaVa~GAa~~aa~l 380 (726)
+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..--|.++|+|.|++|+..
T Consensus 681 L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~ 748 (761)
T 3vth_A 681 TYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKI 748 (761)
T ss_dssp HHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHH
Confidence 3344444444433 578999999999999999999887 443322 2335899999999988754
No 97
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=58.57 E-value=3.8 Score=37.71 Aligned_cols=20 Identities=30% Similarity=0.302 Sum_probs=17.9
Q ss_pred CeEEEEEcCccceEEEEEEC
Q 004867 1 MSVVGFDLGNESCIVAVARQ 20 (726)
Q Consensus 1 m~vvGID~GTt~s~va~~~~ 20 (726)
|-|+|||-|++++..++...
T Consensus 1 MrILGIDPGl~~tG~gvi~~ 20 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAV 20 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEEe
Confidence 88999999999999998653
No 98
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=55.94 E-value=1.5e+02 Score=31.29 Aligned_cols=45 Identities=18% Similarity=0.302 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCC-ChHHHHHHHHHHcC
Q 004867 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (726)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~fg 356 (726)
+-+..++.+.|-..... + ..+|.|+++||-+ +.+.|++.+.+.++
T Consensus 311 d~f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 311 KTFVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhHh
Confidence 34445555555444332 2 4699999999999 99999999988763
No 99
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=54.05 E-value=17 Score=37.78 Aligned_cols=69 Identities=12% Similarity=0.096 Sum_probs=43.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcC-CCC------CCCCCchhhhhcchHHHH
Q 004867 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEP------RRTMNASECVARGCALQC 377 (726)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg-~~v------~~~~n~~eaVa~GAa~~a 377 (726)
++..-+..=+...|.+.++... ..+.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+|. |++|
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~LA 340 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWLA 340 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHHH
Confidence 3333344444444555554432 35689999999999999999999994 233 233455566665 5555
Q ss_pred HH
Q 004867 378 AI 379 (726)
Q Consensus 378 a~ 379 (726)
..
T Consensus 341 ~~ 342 (370)
T 3cqy_A 341 MR 342 (370)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 100
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=53.96 E-value=23 Score=36.84 Aligned_cols=61 Identities=20% Similarity=0.146 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcC-CCC------CCCCCchhhhhcchHHHHHH
Q 004867 314 VKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFG-KEP------RRTMNASECVARGCALQCAI 379 (726)
Q Consensus 314 i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg-~~v------~~~~n~~eaVa~GAa~~aa~ 379 (726)
+...|.+.++... ..++.|+++||+++.|.+.++|++.++ .++ ..+.+.-||+| -|++|..
T Consensus 269 TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~a--FA~LA~~ 336 (371)
T 3qbx_A 269 SARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMA--FAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHH--HHHHHHH
Confidence 3344444444432 236789999999999999999999985 333 22234445554 4555543
No 101
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=52.44 E-value=59 Score=34.92 Aligned_cols=64 Identities=9% Similarity=-0.029 Sum_probs=44.8
Q ss_pred EecCCCCHHHHHHHHHHHHHhCCC--ceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 004867 143 GIPVYFTDLQRRAVIDAATIAGLH--PLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (726)
Q Consensus 143 tVPa~f~~~qR~~l~~Aa~~AGl~--~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~ 213 (726)
.+|..-...-++.|.+|...-|++ ++.++|+..|++++.... .+.+++.+=+|-|+=-+-+...
T Consensus 165 ~~~~~~g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~-------~~~~~iglIlGTG~na~yve~~ 230 (451)
T 1bdg_A 165 SADGVEGHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALE-------DPKCAVGLIVGTGTNVAYIEDS 230 (451)
T ss_dssp CCBTCTTSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTT-------CTTEEEEEEESSSEEEEEEEET
T ss_pred CCCCCCCCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhccc-------CCCcEEEEEEeCCcceEEEEcC
Confidence 344433456678888888777886 358999999999877653 1456777778888666555553
No 102
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=51.67 E-value=8.3 Score=38.86 Aligned_cols=20 Identities=20% Similarity=0.292 Sum_probs=17.0
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
..+|||+|+|.+++++..++
T Consensus 21 ~~iGIDiGsTt~K~V~~~~~ 40 (287)
T 2ews_A 21 MKVGIDAGGTLIKIVQEQDN 40 (287)
T ss_dssp CEEEEEECSSEEEEEEECSS
T ss_pred eEEEEEEChhhEEEEEEcCC
Confidence 47999999999999987544
No 103
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=51.28 E-value=1.1e+02 Score=29.53 Aligned_cols=92 Identities=9% Similarity=0.041 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHHHhhcchhHHHhhHHHhhHHHHHHHHHHHhhhhhccCCCHHH-----H----HHHHHHHHHHHHHh
Q 004867 598 MLPVDVQKAVEKEFEMALQDRVMEETKDRKNAVEAYVYDMRNKLCDKYQDFVTDSE-----R----ELFTSKLQETEDWL 668 (726)
Q Consensus 598 ls~~~~~~~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~~~e-----~----~~i~~~l~~~~~WL 668 (726)
=|..+++....+-..|...++ ..+..-|+.||..++.++.+|.. ..|.+|+. . ..+.....+-+.||
T Consensus 41 ~sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~--~~~~ppeg~~~~di~~~W~~Le~ae~eRe~aL 116 (235)
T 2odv_A 41 SSFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQA--GQLKVPPGYHPLDVEKEWGKLHVAILEREKQL 116 (235)
T ss_dssp SSHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHT--TSSCCCTTCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777777777776444 77788999999999999999962 22333332 2 23333344445555
Q ss_pred hhcCCCcchHHHHHHHHHHHHhhhHHHHHHHhhc
Q 004867 669 YEDGEDETKGVYVAKLEELKKQGDPIEERYKEFT 702 (726)
Q Consensus 669 ~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~ 702 (726)
... ..+++.|..++..+...+...+
T Consensus 117 ~~e---------l~RlerLe~La~kf~rka~~~e 141 (235)
T 2odv_A 117 RSE---------FERLEALQRIVTKLQMEAGLAE 141 (235)
T ss_dssp HHH---------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH---------HHHHHHHHHHHHHHHHHHHHHH
Confidence 543 3455556666665555444433
No 104
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=50.21 E-value=9.3 Score=41.92 Aligned_cols=20 Identities=15% Similarity=0.192 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
.++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 5 VILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEeCCcceEEEEECCC
Confidence 47999999999999988754
No 105
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=49.67 E-value=10 Score=41.65 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 5 ~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 5 YIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEecCCceEEEEEcCC
Confidence 38999999999999988754
No 106
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=49.03 E-value=28 Score=37.44 Aligned_cols=44 Identities=16% Similarity=0.214 Sum_probs=26.5
Q ss_pred ceeeechhHHHHHH-----hhhhcCCCCCCCCceEEEEEeCCceeEEEEEE
Q 004867 167 PLRLFHETTATALA-----YGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (726)
Q Consensus 167 ~~~li~Ep~AaAl~-----y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 212 (726)
.+++|+...=+.++ |.+.. +......++.++|+|||+|.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccCCCCCceEEEecCCCceEEEecc
Confidence 46777755444433 33322 1111235788999999999998764
No 107
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=48.15 E-value=8.8 Score=42.03 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
.++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 3 FLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp CEEEEEECSSEEEEEEECTT
T ss_pred EEEEEeeCCcceEEEEECCC
Confidence 38999999999999988643
No 108
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=47.40 E-value=10 Score=41.84 Aligned_cols=19 Identities=26% Similarity=0.396 Sum_probs=16.5
Q ss_pred EEEEEcCccceEEEEEECC
Q 004867 3 VVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 3 vvGID~GTt~s~va~~~~~ 21 (726)
++|||+|||++++++++..
T Consensus 6 vlgID~GTss~Ka~l~d~~ 24 (526)
T 3ezw_A 6 IVALDQGTTSSRAVVMDHD 24 (526)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEccccceeeeEEcCC
Confidence 7999999999999887643
No 109
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=46.75 E-value=10 Score=41.65 Aligned_cols=20 Identities=20% Similarity=0.316 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 7 ~~lgIDiGtts~k~~l~d~~ 26 (501)
T 3g25_A 7 YILSIDQGTTSSRAILFNQK 26 (501)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCccceEEEEEcCC
Confidence 48999999999999988643
No 110
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=45.87 E-value=11 Score=41.34 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.3
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 6 YVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEcCCCceEEEEECCC
Confidence 48999999999999988753
No 111
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=45.83 E-value=13 Score=37.02 Aligned_cols=21 Identities=19% Similarity=0.205 Sum_probs=18.6
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 004867 2 SVVGFDLGNESCIVAVARQRG 22 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~ 22 (726)
-+++||+|+|+++++++.++.
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 489999999999999998763
No 112
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=45.62 E-value=13 Score=40.71 Aligned_cols=21 Identities=33% Similarity=0.620 Sum_probs=17.7
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 004867 2 SVVGFDLGNESCIVAVARQRG 22 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~ 22 (726)
-++|||+|||++++++++..+
T Consensus 8 ~~lgIDiGtts~k~~l~d~~G 28 (508)
T 3ifr_A 8 QVIGLDIGTTSTIAILVRLPD 28 (508)
T ss_dssp EEEEEEECSSEEEEEEEETTT
T ss_pred EEEEEEecCcceEEEEECCCC
Confidence 379999999999999887543
No 113
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=44.88 E-value=49 Score=35.85 Aligned_cols=30 Identities=13% Similarity=0.244 Sum_probs=24.3
Q ss_pred CceEEEEEeCCceeEEEEEEeeCC-eEEEEE
Q 004867 193 QLNVAFVDIGHASLQVCIAGFKKG-QLKILG 222 (726)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~-~~~vl~ 222 (726)
...+|.+|+||.++-+.++++.+. .+++..
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~ 109 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTTQ 109 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEEE
Confidence 467999999999999999999864 455443
No 114
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=44.43 E-value=13 Score=41.03 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 27 ~~lgIDiGtts~k~~l~d~~ 46 (520)
T 4e1j_A 27 YILAIDQGTTSTRAIVFDGN 46 (520)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred eEEEEEeCCcceEEEEECCC
Confidence 48999999999999988643
No 115
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=44.26 E-value=2.4e+02 Score=29.97 Aligned_cols=58 Identities=12% Similarity=0.081 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHhC---CCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 004867 149 TDLQRRAVIDAATIAG---LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (726)
Q Consensus 149 ~~~qR~~l~~Aa~~AG---l~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~ 213 (726)
...-.+.+.+|...-| ++++.++|+.+|+.++.+... +.+.+-+=+|-||=-+.+.++
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-------~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-------PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-------CCceEEEEEeCCceEEEEEec
Confidence 3455778888887653 568899999999998865421 345666667888666555444
No 116
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=44.07 E-value=15 Score=40.86 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 6 YFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEECcccEEEEEECCC
Confidence 48999999999999988744
No 117
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=43.93 E-value=12 Score=41.10 Aligned_cols=20 Identities=25% Similarity=0.345 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 4 ~~lgIDiGtts~k~~l~d~~ 23 (510)
T 2p3r_A 4 YIVALDQGTTSSRAVVMDHD 23 (510)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEcCCcceEEEEECCC
Confidence 48999999999999987643
No 118
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=43.86 E-value=14 Score=40.91 Aligned_cols=20 Identities=15% Similarity=0.386 Sum_probs=17.1
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||.+++++++..
T Consensus 11 ~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 11 CCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred EEEEEEEcCcCEEEEEECCC
Confidence 38999999999999887743
No 119
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=43.39 E-value=13 Score=40.98 Aligned_cols=18 Identities=39% Similarity=0.597 Sum_probs=16.7
Q ss_pred eEEEEEcCccceEEEEEE
Q 004867 2 SVVGFDLGNESCIVAVAR 19 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~ 19 (726)
-++|||+|||++++++++
T Consensus 6 ~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 6 LVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp EEEEEEECSSEEEEEEEE
T ss_pred EEEEEEeccccEEEEEEE
Confidence 489999999999999987
No 120
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=42.13 E-value=28 Score=35.21 Aligned_cols=50 Identities=12% Similarity=0.188 Sum_probs=39.9
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
+.+...+.+...++++|+++++++++|++|+.-|++.++ -+.+.+.||.+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 334456677889999999999999999999999987665 45688888753
No 121
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=41.70 E-value=13 Score=40.81 Aligned_cols=20 Identities=25% Similarity=0.458 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
.++|||+|||++++++++..
T Consensus 6 ~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 6 YIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEeCCCceEEEEECCC
Confidence 58999999999999988643
No 122
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=41.62 E-value=1.4e+02 Score=31.22 Aligned_cols=47 Identities=11% Similarity=0.176 Sum_probs=31.7
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCC-ChHHHHHHHHHHcC
Q 004867 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (726)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~fg 356 (726)
.++-++.++.+.|-...... .++|.|+++||-+ +.+.|++.+.+.++
T Consensus 302 a~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l~ 349 (398)
T 4ijn_A 302 AYDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGLG 349 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHHh
Confidence 33445555555554444333 3689999999988 56889999887653
No 123
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=41.25 E-value=14 Score=40.38 Aligned_cols=20 Identities=20% Similarity=0.263 Sum_probs=17.2
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||+++++++...
T Consensus 4 ~~lgiDiGtt~~k~~l~d~~ 23 (497)
T 2zf5_O 4 FVLSLDEGTTSARAIIFDRE 23 (497)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCchhEEEEECCC
Confidence 48999999999999987643
No 124
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=41.11 E-value=11 Score=41.03 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=16.8
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 7 ~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 7 ATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp -CEEEEECSSEEEEEEECTT
T ss_pred eEEEEEcCCCCeEEEEEECC
Confidence 47999999999999988743
No 125
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=41.04 E-value=71 Score=34.41 Aligned_cols=51 Identities=18% Similarity=0.320 Sum_probs=33.3
Q ss_pred CceEEEEEeCCceeEEEEEEeeCC-----eEEEEEEecCCC----ccchHHHHHHHHHHHHHH
Q 004867 193 QLNVAFVDIGHASLQVCIAGFKKG-----QLKILGHSFDRS----VGGRDFDEVLFQHFAAKF 246 (726)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~~-----~~~vl~~~~~~~----lGG~~iD~~l~~~l~~~~ 246 (726)
...+|.+|+||.+|-|..|++.++ .+++....+..+ .| . ...|.+|+.+.+
T Consensus 76 ~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 76 VGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred ceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 567999999999999999999865 355554443332 22 1 245566655543
No 126
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=40.94 E-value=16 Score=37.35 Aligned_cols=37 Identities=16% Similarity=0.030 Sum_probs=24.3
Q ss_pred eeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEE
Q 004867 169 RLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAG 212 (726)
Q Consensus 169 ~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 212 (726)
....-|.|.|...+.. . ....+++|+||.|||+..+.
T Consensus 109 ~aaanw~ASa~~~A~~-~------~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 109 VSASNWCGTAKWVSKN-I------EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp TBCCSSHHHHHHHHHH-T------CSSEEEEEECSSCEEEEEEE
T ss_pred HHhcCHHHHHHHHHHh-c------CCCEEEEEcCcchhhhhhhc
Confidence 3445566666632222 1 13579999999999998876
No 127
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=40.81 E-value=11 Score=41.16 Aligned_cols=19 Identities=42% Similarity=0.489 Sum_probs=16.6
Q ss_pred eEEEEEcCccceEEEEEEC
Q 004867 2 SVVGFDLGNESCIVAVARQ 20 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~ 20 (726)
.++|||+|||++++++++.
T Consensus 5 ~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 5 NCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp EEEEEEECSSEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEEe
Confidence 4799999999999998763
No 128
>3l39_A Putative PHOU-like phosphate regulatory protein; BT4638, structural genomics, joint center for structural genomics, JCSG; 1.93A {Bacteroides thetaiotaomicron}
Probab=40.47 E-value=2.5e+02 Score=26.70 Aligned_cols=107 Identities=8% Similarity=0.042 Sum_probs=66.4
Q ss_pred hhHHHhhHHHhhHHHHHHHHHHHhhhh-hccCCCHHHHHHHHHH----------HHHHHHHhhhcCCCcchHHHHHHHHH
Q 004867 618 RVMEETKDRKNAVEAYVYDMRNKLCDK-YQDFVTDSERELFTSK----------LQETEDWLYEDGEDETKGVYVAKLEE 686 (726)
Q Consensus 618 ~~~~~~~~akN~LEs~iy~~r~~l~~~-~~~~~~~~e~~~i~~~----------l~~~~~WL~~~~~~a~~~~~~~kl~~ 686 (726)
....+.......+|.-.-.++..+... .+.|++|-+|+.|... ++.+-.|++--......+.+.+-.+.
T Consensus 56 ~~~~~~~~~I~~lE~~aD~i~~~i~~~L~~~fitP~dReDI~~L~~~lDdI~D~ie~~a~~l~l~~~~~~~~~~~~l~~~ 135 (227)
T 3l39_A 56 TERADYYKQIKDMEREGDRLTHLIFDELSTTFITPFDREDIHDLASCMDDVIDGINSSAKRIVIYNPRPISESGKELSRL 135 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHH
Confidence 334556666777777777777776543 3678888877655443 34444555443334445666777777
Q ss_pred HHHhhhHHHHHHHhhcc---cHHHHHHHHHHHHHHHHHHhc
Q 004867 687 LKKQGDPIEERYKEFTD---RSSVIDQLAYCINSYREAALS 724 (726)
Q Consensus 687 L~~~~~~i~~R~~e~~~---rp~~~~~~~~~~~~~~~~~~~ 724 (726)
+.+-+.-+..-+.+... .+..+...-..|+..+..++.
T Consensus 136 i~~~~~~l~~ai~~L~~~~~~~~~i~~~~~eI~~lE~eaD~ 176 (227)
T 3l39_A 136 IHEEAINIGKAMDELETFRKNPKPLRDYCTQLHDIENQADD 176 (227)
T ss_dssp HHHHHHHHHHHHTTTTTTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77777777666666554 456666666777777666654
No 129
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=40.45 E-value=1.5e+02 Score=31.83 Aligned_cols=58 Identities=12% Similarity=0.075 Sum_probs=40.9
Q ss_pred CHHHHHHHHHHHHHhC---CCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEEEe
Q 004867 149 TDLQRRAVIDAATIAG---LHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIAGF 213 (726)
Q Consensus 149 ~~~qR~~l~~Aa~~AG---l~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~ 213 (726)
...-.+.+++|++.-| ++++.++|+.+|..++.+... +...+-+=+|-||--+.+-+.
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-------~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-------HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-------TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-------CCceEEEEEecCCceEEeeec
Confidence 4556788889998887 357889999999988765431 345555557888775555444
No 130
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=40.45 E-value=1.3e+02 Score=31.23 Aligned_cols=45 Identities=11% Similarity=0.127 Sum_probs=30.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCC-ChHHHHHHHHHHcC
Q 004867 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSS-RVPAIIKILTEFFG 356 (726)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-rip~v~~~l~~~fg 356 (726)
+-+..++.+.|-..... + ..+|.|+++||-+ ..+.|++.+.+.++
T Consensus 294 d~f~yri~k~IGa~aa~--L--~gvDaIVFTgGIgEns~~iR~~i~~~l~ 339 (384)
T 3khy_A 294 EIFSHRVAKFVASYMIY--F--NKLDALVFTGGIGENAANIRKNIISKLA 339 (384)
T ss_dssp HHHHHHHHHHHHHHGGG--C--SSCCEEEEEHHHHHHCHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHHHHH--h--CCCCEEEECCccccCcHHHHHHHHhhcc
Confidence 34445555555444322 2 3699999999988 77999999887653
No 131
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=40.14 E-value=16 Score=40.83 Aligned_cols=19 Identities=26% Similarity=0.359 Sum_probs=17.0
Q ss_pred eEEEEEcCccceEEEEEEC
Q 004867 2 SVVGFDLGNESCIVAVARQ 20 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~ 20 (726)
.++|||+|||++++++++.
T Consensus 6 ~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 6 YTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp EEEEEEECSSEEEEEEEET
T ss_pred EEEEEecCCcceEEEEEEC
Confidence 4899999999999998874
No 132
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=39.50 E-value=14 Score=40.13 Aligned_cols=19 Identities=26% Similarity=0.538 Sum_probs=16.5
Q ss_pred EEEEEcCccceEEEEEECC
Q 004867 3 VVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 3 vvGID~GTt~s~va~~~~~ 21 (726)
++|||+|||++++++++..
T Consensus 2 ~lgiDiGtt~~k~~l~d~~ 20 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNEQ 20 (484)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCcccEEEEECCC
Confidence 6899999999999987643
No 133
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=39.31 E-value=67 Score=24.72 Aligned_cols=48 Identities=25% Similarity=0.373 Sum_probs=35.9
Q ss_pred HHHHHH-HHHHHHhhcchhHHHhhHHHhhHHHHHHHHHHHhhhhhccCCC
Q 004867 602 DVQKAV-EKEFEMALQDRVMEETKDRKNAVEAYVYDMRNKLCDKYQDFVT 650 (726)
Q Consensus 602 ~~~~~~-~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~l~~~~~~~~~ 650 (726)
+++... ++.+++...|...+++.......|+.|-.+++.|+ .|+..++
T Consensus 23 eLq~~L~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD-KfrSVl~ 71 (72)
T 3nmd_A 23 DLQYALQEKIEELRQRDALIDELELELDQKDELIQMLQNELD-KYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCC
Confidence 444433 46677888888888888888999999888888885 5665554
No 134
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=39.08 E-value=1e+02 Score=33.13 Aligned_cols=53 Identities=13% Similarity=-0.019 Sum_probs=33.3
Q ss_pred CCceEEEEEeCCceeEEEEEEeeCCe---EEEEEEecCCCc---cchHHHHHHHHHHHH
Q 004867 192 DQLNVAFVDIGHASLQVCIAGFKKGQ---LKILGHSFDRSV---GGRDFDEVLFQHFAA 244 (726)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsvv~~~~~~---~~vl~~~~~~~l---GG~~iD~~l~~~l~~ 244 (726)
+...++.+|+||.++-+.++...+.. +......-...+ +|..+-..|++.+.+
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~ 117 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAA 117 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHH
Confidence 35678999999999999999988764 222222212222 555555555555443
No 135
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=37.46 E-value=16 Score=39.98 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=17.1
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
-++|||+|||++++++++..
T Consensus 3 ~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 3 YVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEecCCcceEEEEECCC
Confidence 47999999999999987643
No 136
>1d7m_A Cortexillin I; coiled-coil, coiled-coil trigger site, alpha helix, dimeriza contractIle protein; 2.70A {Dictyostelium discoideum} SCOP: h.1.10.1
Probab=35.60 E-value=1.2e+02 Score=24.01 Aligned_cols=12 Identities=33% Similarity=0.451 Sum_probs=4.8
Q ss_pred HHHHHHHhhhHH
Q 004867 683 KLEELKKQGDPI 694 (726)
Q Consensus 683 kl~~L~~~~~~i 694 (726)
++.+|+...+.+
T Consensus 47 ~i~el~akidd~ 58 (101)
T 1d7m_A 47 RLRELEAKLDET 58 (101)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 444444433333
No 137
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=34.25 E-value=42 Score=33.67 Aligned_cols=47 Identities=19% Similarity=0.280 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
.....+...++++|+++++++++|+.|++-|+++++ -+.+.+.||.+
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 345677788999999999999999999999988765 34577888743
No 138
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=34.08 E-value=38 Score=34.28 Aligned_cols=48 Identities=19% Similarity=0.257 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
.-....+...++++|+++++++++|+.|++.|++.++ -+.+.+.||.+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3445677788999999999999999999999987654 34677888743
No 139
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=34.08 E-value=31 Score=34.30 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=31.2
Q ss_pred ccEEEEEcCCCChHHHHHHHHHHcCCC-------CCCCCCchhhhhcchHHHH
Q 004867 332 VHMVEVVGSSSRVPAIIKILTEFFGKE-------PRRTMNASECVARGCALQC 377 (726)
Q Consensus 332 i~~ViLvGG~srip~v~~~l~~~fg~~-------v~~~~n~~eaVa~GAa~~a 377 (726)
++.|+|.||.+..+.+.+.+++.+... +......+.+.++|||.++
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 467888888876677777777766421 2223345668899999775
No 140
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=33.40 E-value=25 Score=35.16 Aligned_cols=67 Identities=6% Similarity=-0.093 Sum_probs=40.6
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCCC-CccEEEEEcCCCCh--HHHHHHHHHHcCCCCCCCCCchhhhhcchHHHHHH
Q 004867 306 ISAPILERVKRPLEKALAETGLSVE-DVHMVEVVGSSSRV--PAIIKILTEFFGKEPRRTMNASECVARGCALQCAI 379 (726)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~-~i~~ViLvGG~sri--p~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~aa~ 379 (726)
.+..++++....+-..+ . +..- +.+.|+|.||.++. +.+++.+++.. .++ ..|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRG-LTL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTT-CCE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcC-Cee---cccCcCHHHHHHHHHHh
Confidence 34445555555555555 2 2222 56789999998776 66666666542 122 23557888999988864
No 141
>2wl8_A Peroxisomal biogenesis factor 19; protein transport, biogenesis disorder, zellweger syndrome, membrane, prenylation; 2.05A {Homo sapiens}
Probab=33.36 E-value=1e+02 Score=26.68 Aligned_cols=45 Identities=16% Similarity=0.213 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHh
Q 004867 655 ELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKE 700 (726)
Q Consensus 655 ~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e 700 (726)
+-+++..+++=.||..++...+.+++. |...=..++..|...+..
T Consensus 33 epmKel~~kyP~WLe~nk~~l~~Ed~~-RY~kQ~~lv~~I~~~fE~ 77 (126)
T 2wl8_A 33 PSLKEITEKYPEWLQSHRESLPPEQFE-KYQEQHSVMCKICEQFEA 77 (126)
T ss_dssp HHHHHHHTTHHHHHHHHGGGSCHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHhhHHHHhCcccCCHHHHH-HHHHHHHHHHHHHHHHcC
Confidence 457788888999999987777777644 444444455555554444
No 142
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=32.59 E-value=24 Score=34.62 Aligned_cols=21 Identities=14% Similarity=0.302 Sum_probs=18.0
Q ss_pred eEEEEEcCccceEEEEEECCc
Q 004867 2 SVVGFDLGNESCIVAVARQRG 22 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~~ 22 (726)
-.++||.|+|+++.+++.++.
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 479999999999999987553
No 143
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=32.46 E-value=1.2e+02 Score=32.42 Aligned_cols=34 Identities=15% Similarity=0.387 Sum_probs=26.8
Q ss_pred CCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecC
Q 004867 192 DQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFD 226 (726)
Q Consensus 192 ~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~ 226 (726)
+...+|.+|+||.++-+.++++.++ +++....+.
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~-~~~~~~~~~ 90 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG-VQITSEIYS 90 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS-EEEEEEEEC
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc-eEEEEEEec
Confidence 3567999999999999999999766 665554444
No 144
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=32.19 E-value=1.8e+02 Score=32.58 Aligned_cols=40 Identities=13% Similarity=0.302 Sum_probs=31.9
Q ss_pred HHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCCh
Q 004867 305 QISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRV 344 (726)
Q Consensus 305 ~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sri 344 (726)
.+-+-+++.+..++.+++.++++.+.+|..+.++|-.+-.
T Consensus 263 ~L~~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M~ 302 (631)
T 3zyy_X 263 KLRKAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTMT 302 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHHH
Confidence 4444566778888899999999999999999999976433
No 145
>1h7c_A Tubulin-specific chaperone A; protein folding, cofactor A; 1.8A {Homo sapiens} SCOP: a.7.5.1
Probab=30.65 E-value=1.6e+02 Score=24.57 Aligned_cols=43 Identities=9% Similarity=0.057 Sum_probs=32.8
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHH
Q 004867 647 DFVTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKK 689 (726)
Q Consensus 647 ~~~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~ 689 (726)
..+-|+-+..|.+.+.+++++|..+......++|.+....|..
T Consensus 61 ~~mipd~~~Rl~~a~~~L~~~l~~e~~~~~~ee~~~Ake~l~~ 103 (108)
T 1h7c_A 61 RMMIPDCQRRLEAAYLDLQRILENEKDLEEAEEYKEARLVLDS 103 (108)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHHHCGGGTTSHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHH
Confidence 4567888889999999999999865444666777777666654
No 146
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=29.86 E-value=85 Score=31.58 Aligned_cols=48 Identities=13% Similarity=0.170 Sum_probs=32.3
Q ss_pred CccEEEEEcCCCCh-----HHHHHHHHHHcCCC-------CCCCCCchhhhhcchHHHHH
Q 004867 331 DVHMVEVVGSSSRV-----PAIIKILTEFFGKE-------PRRTMNASECVARGCALQCA 378 (726)
Q Consensus 331 ~i~~ViLvGG~sri-----p~v~~~l~~~fg~~-------v~~~~n~~eaVa~GAa~~aa 378 (726)
+++.|+|-||.+.. +.+++.+++.+... +....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 46788888888765 56777777765311 12222356889999998774
No 147
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=29.60 E-value=58 Score=32.70 Aligned_cols=48 Identities=10% Similarity=0.185 Sum_probs=37.7
Q ss_pred hHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 308 APILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 308 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
......+...++++|+++++++++|+.|++.++++++ -+.+.+.||.+
T Consensus 208 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 255 (313)
T 1zow_A 208 KFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLGIS 255 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 3455677888999999999999999999999887654 34567777743
No 148
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=29.29 E-value=1.9e+02 Score=23.66 Aligned_cols=16 Identities=13% Similarity=0.258 Sum_probs=6.4
Q ss_pred HHhhHHHHHHHHHHHh
Q 004867 626 RKNAVEAYVYDMRNKL 641 (726)
Q Consensus 626 akN~LEs~iy~~r~~l 641 (726)
+.+.|...+-.+...|
T Consensus 10 ~l~el~~WL~~~e~~l 25 (119)
T 3uun_A 10 ALEEVLSWLLSAEDTL 25 (119)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3334444444443333
No 149
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=28.79 E-value=57 Score=33.16 Aligned_cols=47 Identities=11% Similarity=0.290 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
-....+...++++|+++++++++|++|++.+++.++ -+.+.+.||.+
T Consensus 221 ~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 267 (331)
T 2x3e_A 221 QAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLDLP 267 (331)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 345677788999999999999999999999888664 34577778743
No 150
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=28.59 E-value=35 Score=33.83 Aligned_cols=20 Identities=20% Similarity=0.449 Sum_probs=17.7
Q ss_pred EEEEEcCccceEEEEEECCc
Q 004867 3 VVGFDLGNESCIVAVARQRG 22 (726)
Q Consensus 3 vvGID~GTt~s~va~~~~~~ 22 (726)
++.||.|+|+++.+++.++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 58899999999999998664
No 151
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=28.35 E-value=83 Score=35.21 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=45.3
Q ss_pred EEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHH
Q 004867 295 RGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILT 352 (726)
Q Consensus 295 ~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~ 352 (726)
.+.||..++.++.. --..|..-++-.|+++|++..+|+.|+|.||++.-=-+.+++.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 46799999988644 2335566677888999999999999999999998777766664
No 152
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=28.23 E-value=19 Score=37.83 Aligned_cols=48 Identities=10% Similarity=0.085 Sum_probs=32.6
Q ss_pred CccEEEEEcCCCChHH-HHHHHHHHcCC--C--CCCCCCchhhhhcchHHHHH
Q 004867 331 DVHMVEVVGSSSRVPA-IIKILTEFFGK--E--PRRTMNASECVARGCALQCA 378 (726)
Q Consensus 331 ~i~~ViLvGG~srip~-v~~~l~~~fg~--~--v~~~~n~~eaVa~GAa~~aa 378 (726)
+++.|+|.||.+..+. +.+.|.+.+.. + +......+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999986543 77777777742 1 22233334689999997764
No 153
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=28.03 E-value=25 Score=35.22 Aligned_cols=67 Identities=9% Similarity=-0.070 Sum_probs=36.6
Q ss_pred HhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 307 SAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 307 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
+..++++....+-..+ ...+ ..+.+.|+|.||.+.. +.+.|++.+..+......+..+.+.||++++
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la 276 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYH 276 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHH
Confidence 3345555555554444 2221 1156788888887765 5566666664321111234467778888765
No 154
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=27.98 E-value=60 Score=33.10 Aligned_cols=47 Identities=23% Similarity=0.281 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
-....+...++++|+++++++++|++|+..|++.++ -+.+.+.||.+
T Consensus 228 ~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 274 (339)
T 1mzj_A 228 WAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLGVP 274 (339)
T ss_dssp HHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhCCC
Confidence 345677788999999999999999999999887654 34677788743
No 155
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=27.87 E-value=14 Score=37.16 Aligned_cols=61 Identities=8% Similarity=-0.086 Sum_probs=35.4
Q ss_pred CcCcEEEEecCCCCHHHHHHHHHHHHH-hCC-CceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCcee
Q 004867 136 AVVDCCIGIPVYFTDLQRRAVIDAATI-AGL-HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASL 206 (726)
Q Consensus 136 ~~~~~VitVPa~f~~~qR~~l~~Aa~~-AGl-~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~ 206 (726)
.+..+.|++|..- ......+++..+. .++ ..+.+.|+..||+++-. . ....+++=+|-|.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~----g-----~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC----G-----DSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT----T-----TSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc----C-----CCCcEEEEecCChh
Confidence 3556778888764 2222234444433 354 36889999999988641 1 23344444676654
No 156
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=27.54 E-value=3.1e+02 Score=26.36 Aligned_cols=78 Identities=13% Similarity=0.157 Sum_probs=43.0
Q ss_pred HHHhhHHHhhHHHHHHHHHHHhhh---hhccC---CCHHHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhH
Q 004867 620 MEETKDRKNAVEAYVYDMRNKLCD---KYQDF---VTDSERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDP 693 (726)
Q Consensus 620 ~~~~~~akN~LEs~iy~~r~~l~~---~~~~~---~~~~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~ 693 (726)
.....+.+..|.-|.-.+|++|.. +++.. ..++-|.++...+.++.+||...- ..-.+.+....++|+....|
T Consensus 131 ~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~~ee~r~kl~~~~~el~~~l~p~~-~e~~~kl~~~~e~lr~~l~p 209 (243)
T 2a01_A 131 RQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALKENGGARL-AEYHAKATEHLSTLSEKAKP 209 (243)
T ss_dssp HHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TSSSCCHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHhHH
Confidence 334444455555555555555531 22221 345667777888888888885531 12222345566667776666
Q ss_pred HHHHH
Q 004867 694 IEERY 698 (726)
Q Consensus 694 i~~R~ 698 (726)
....+
T Consensus 210 ~~e~l 214 (243)
T 2a01_A 210 ALEDL 214 (243)
T ss_dssp HHHHS
T ss_pred HHHHH
Confidence 66543
No 157
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=26.63 E-value=46 Score=32.68 Aligned_cols=45 Identities=16% Similarity=0.244 Sum_probs=29.0
Q ss_pred hCCCceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCceeEEEEE
Q 004867 163 AGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASLQVCIA 211 (726)
Q Consensus 163 AGl~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 211 (726)
.|++ +.+.|+..|+|++......... ....++++-+|.| .-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~--~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAG--VKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTT--CCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCC--CCCcEEEEEECcc-eEEEEE
Confidence 3765 7899999999988644322110 1235778888887 555554
No 158
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=26.54 E-value=42 Score=26.93 Aligned_cols=27 Identities=22% Similarity=0.234 Sum_probs=25.0
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHhCCC
Q 004867 140 CCIGIPVYFTDLQRRAVIDAATIAGLH 166 (726)
Q Consensus 140 ~VitVPa~f~~~qR~~l~~Aa~~AGl~ 166 (726)
-.++.|+.++..+|..+-..|+..||.
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~ 60 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLR 60 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCC
Confidence 578999999999999999999999975
No 159
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=26.52 E-value=1.8e+02 Score=23.88 Aligned_cols=18 Identities=6% Similarity=0.141 Sum_probs=8.2
Q ss_pred hHHHhhHHHHHHHHHHHh
Q 004867 624 KDRKNAVEAYVYDMRNKL 641 (726)
Q Consensus 624 ~~akN~LEs~iy~~r~~l 641 (726)
..+.+.|.+.|-.+...|
T Consensus 8 ~~~l~el~~WL~e~e~~l 25 (118)
T 3uul_A 8 QIALEEVLTWLLSAEDTF 25 (118)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 334444444444444444
No 160
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=26.17 E-value=1e+02 Score=30.91 Aligned_cols=48 Identities=8% Similarity=-0.022 Sum_probs=30.6
Q ss_pred CccEEEEEcCCCCh----HHHHHHHHHHcCC-------------CCCCCCCchhhhhcchHHHHH
Q 004867 331 DVHMVEVVGSSSRV----PAIIKILTEFFGK-------------EPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 331 ~i~~ViLvGG~sri----p~v~~~l~~~fg~-------------~v~~~~n~~eaVa~GAa~~aa 378 (726)
+++.|+|-||.++. +.+++.+.+.... .+....-.+.|.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 46788888888764 4555666655421 122233456789999998764
No 161
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=25.61 E-value=3.1e+02 Score=23.30 Aligned_cols=59 Identities=8% Similarity=0.025 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCcchHHHHHHHHHHHHhhhHHHHHHHhhcccHHHHHHHHH
Q 004867 652 SERELFTSKLQETEDWLYEDGEDETKGVYVAKLEELKKQGDPIEERYKEFTDRSSVIDQLAY 713 (726)
Q Consensus 652 ~e~~~i~~~l~~~~~WL~~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~rp~~~~~~~~ 713 (726)
+.++++.+.+..+..- .+...-+.+|....++++++-+.+..++...+..-..++.++.
T Consensus 48 ~l~~~i~er~~~i~~~---~~~~~yk~~y~~l~k~Y~~~~keLd~~ik~qekiIdnFE~ik~ 106 (119)
T 3etw_A 48 QVYNELSQRAQRLQAE---ANTRFYKSQYQELASKYEDALKKLEAEMEQQKAVISDFEKIQA 106 (119)
T ss_dssp HHHHHHHHHHHHHHHH---TTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh---hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555555541 2356778899999999999999999988887776666666554
No 162
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=24.88 E-value=2.4e+02 Score=27.29 Aligned_cols=61 Identities=15% Similarity=0.160 Sum_probs=33.1
Q ss_pred CcCcEEEEecCCCCHHHHHHHHHHHHH-hCCCcee----------eechh-------HHHHHHhhhhcCCCCCCCCceEE
Q 004867 136 AVVDCCIGIPVYFTDLQRRAVIDAATI-AGLHPLR----------LFHET-------TATALAYGIYKTDLPENDQLNVA 197 (726)
Q Consensus 136 ~~~~~VitVPa~f~~~qR~~l~~Aa~~-AGl~~~~----------li~Ep-------~AaAl~y~~~~~~~~~~~~~~vl 197 (726)
.+..+.|+.|. +.....++.+++. .+..++. ..+.| .|+|++... .. +..++
T Consensus 56 ~i~~i~IsSVv---p~~~~~~~~~~~~~~~~~p~~v~~~~~gl~~~y~~P~~lG~DR~~~~~aa~~-~~------~~~~i 125 (249)
T 3bex_A 56 EIKGIGVASVV---PTQNTVIERFSQKYFHISPIWVKAKNGCVKWNVKNPSEVGADRVANVVAFVK-EY------GKNGI 125 (249)
T ss_dssp GEEEEEEEESC---HHHHHHHHHHHHHHHSCCCEECCCCSSSSEECSSCGGGSCHHHHHHHHHHHH-HT------CSCEE
T ss_pred cCCEEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEccCCCceeccCChhhcCHHHHHHHHHHHH-Hc------CCCEE
Confidence 46678888774 4455555555543 3443222 12222 345544322 11 35799
Q ss_pred EEEeCCcee
Q 004867 198 FVDIGHASL 206 (726)
Q Consensus 198 v~D~Gggt~ 206 (726)
|+|+|-.+|
T Consensus 126 VvD~GTA~T 134 (249)
T 3bex_A 126 IIDMGTATT 134 (249)
T ss_dssp EEEESSEEE
T ss_pred EEEcCCceE
Confidence 999997644
No 163
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=24.82 E-value=52 Score=34.38 Aligned_cols=20 Identities=10% Similarity=0.283 Sum_probs=17.9
Q ss_pred eEEEEEcCccceEEEEEECC
Q 004867 2 SVVGFDLGNESCIVAVARQR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~~~ 21 (726)
.++|||+|.|+++++++..+
T Consensus 3 ~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 3 RILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp EEEEEEECSSEEEEEEEETT
T ss_pred eEEEEECCccceeEEEEecc
Confidence 48999999999999998764
No 164
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=23.90 E-value=5.5e+02 Score=25.57 Aligned_cols=232 Identities=12% Similarity=0.077 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhcCCCcCcEEEEecC------------CCCHHHHHHHHHHHHHhCCCceeeechhHHHHHHhhhh-----
Q 004867 122 LSNLKAIAESNLNAAVVDCCIGIPV------------YFTDLQRRAVIDAATIAGLHPLRLFHETTATALAYGIY----- 184 (726)
Q Consensus 122 L~~l~~~a~~~~~~~~~~~VitVPa------------~f~~~qR~~l~~Aa~~AGl~~~~li~Ep~AaAl~y~~~----- 184 (726)
+..+........+..+..+.|++|. .|. ..++.+.+.. |++.+.+.|+..|+|++-...
T Consensus 52 ~~~~i~~~~~~~~~~i~gigi~~pG~vd~~~~~~~nl~w~-~~~~~l~~~~---~~p~V~v~NDanaaalgE~~~~~~~~ 127 (332)
T 1sz2_A 52 LEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWA-FSIAEMKKNL---GFSHLEIINDFTAVSMAIPMLKKEHL 127 (332)
T ss_dssp HHHHHHHHHHHSCCCCCEEEEEESSCCCSSEECCSSSCCC-EEHHHHHHHH---TCSEEEEEEHHHHHHHHGGGCCGGGE
T ss_pred HHHHHHHHHHhcCCCccEEEEEEeCceeCCEEeeeCCCCc-CCHHHHHHHh---CCCcEEEEeCHhHHhccccccChhhh
Q ss_pred --------cCCCCCCCCceEEEEEeCCceeEEEEEEeeCCeEEEEEEecCCCcc-chHHHHHHHHHHHHHHHhhhccCcc
Q 004867 185 --------KTDLPENDQLNVAFVDIGHASLQVCIAGFKKGQLKILGHSFDRSVG-GRDFDEVLFQHFAAKFKEEYKIDVS 255 (726)
Q Consensus 185 --------~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~vl~~~~~~~lG-G~~iD~~l~~~l~~~~~~~~~~~~~ 255 (726)
+ ...+++++-+|-|-=-.-++.-..+..-.-+..|...+. ....+..+..+++..+. .....-.
T Consensus 128 ~~~g~g~~~------~~~~~~~v~~GTGiG~giv~~g~~G~~g~agE~GH~~v~~~~~~~~~l~~~~c~~~g-~gclE~~ 200 (332)
T 1sz2_A 128 IQFGGAEPV------EGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEAIILEILRAEIG-HVSAERV 200 (332)
T ss_dssp EECSSCCCC------TTCCEEEEEESSSEEEEEEEEETTEEEEEECCGGGSBCCCCSHHHHHHHHHHHHHSS-SCBGGGT
T ss_pred eecCCCCCC------CCCcEEEEEcCccceEEEEecCCCCeeeCCCCccccCcCCCChHHHHHHHHHHhccC-Ccchhhh
Q ss_pred CCHHHHHHHHHHHHHHhhhcCCCCcccEEeccccCC-cceEEEeCHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCCCccE
Q 004867 256 QNARASLRLRVACEKLKKVLSANPEAPLNIECLMEE-KDVRGFIKRDEFEQISAPILERVKRPLEKALAETGLSVEDVHM 334 (726)
Q Consensus 256 ~~~~~~~rL~~~ae~~K~~Ls~~~~~~i~i~~l~~~-~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ 334 (726)
-+...+.++..........-........-++....+ ...- ++-|++.+.-+-.-+..++.-. +.+.
T Consensus 201 ~S~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~a~~G~D~~A----~~~~~~~~~~Lg~~i~~l~~~l---------~P~~ 267 (332)
T 1sz2_A 201 LSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDC----RRALSLFCVIMGRFGGNLALNL---------GTFG 267 (332)
T ss_dssp SSHHHHHHHHHHHHHHTTCCCCCCCHHHHHHHHHHTCCHHH----HHHHHHHHHHHHHHHHHHHHHH---------TCTT
T ss_pred ccHHHHHHHHHHHhhccCCCccCCCHHHHHHHHHcCCCHHH----HHHHHHHHHHHHHHHHHHHHHH---------CCCe
Q ss_pred -EEEEcCCCCh-------HHHHHHHHH--Hc-----CCCCCCCCCchhhhhcchHHHHH
Q 004867 335 -VEVVGSSSRV-------PAIIKILTE--FF-----GKEPRRTMNASECVARGCALQCA 378 (726)
Q Consensus 335 -ViLvGG~sri-------p~v~~~l~~--~f-----g~~v~~~~n~~eaVa~GAa~~aa 378 (726)
|+|.||.+.. |.+++.+.+ .+ ..++.... .+.+..+||+.++.
T Consensus 268 gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~l~GAa~l~~ 325 (332)
T 1sz2_A 268 GVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV-HDNPGLLGSGAHLR 325 (332)
T ss_dssp EEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEEC-CSCHHHHHHHHHHH
T ss_pred EEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEE-CCchhHHHHHHHHH
No 165
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=23.87 E-value=86 Score=31.86 Aligned_cols=50 Identities=16% Similarity=0.189 Sum_probs=39.5
Q ss_pred HHhHHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 306 ISAPILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 306 l~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
+++..++.+...++++|++++++.++|+.+++..++.+ +-+.+.+.+|.+
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lgl~ 277 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLGLP 277 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCC
Confidence 34455677788899999999999999999999988765 346777778754
No 166
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=23.50 E-value=55 Score=32.91 Aligned_cols=43 Identities=14% Similarity=0.226 Sum_probs=31.9
Q ss_pred cEEEEEcCCCChHHHHHHHHHHcCCCCCCCCCchhhhhcchHHHH
Q 004867 333 HMVEVVGSSSRVPAIIKILTEFFGKEPRRTMNASECVARGCALQC 377 (726)
Q Consensus 333 ~~ViLvGG~srip~v~~~l~~~fg~~v~~~~n~~eaVa~GAa~~a 377 (726)
..|.|+|........+..|+. +|.++ ...++++++..|....+
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~-~~~d~~~~~~~GL~~~~ 290 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREV-SAVAGDTAFQTGIRSIA 290 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCE-EEEEHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCc-eecCHHHHHHHHHHHHH
Confidence 569999999888888888864 67644 34488888888876443
No 167
>3mxz_A Tubulin-specific chaperone A; helix bundle; 1.60A {Arabidopsis thaliana}
Probab=23.32 E-value=3.4e+02 Score=22.94 Aligned_cols=43 Identities=9% Similarity=0.048 Sum_probs=30.3
Q ss_pred cCCCHHHHHHHHHHHHHHHHHhhhc-C-CCcchHHHHHHHHHHHH
Q 004867 647 DFVTDSERELFTSKLQETEDWLYED-G-EDETKGVYVAKLEELKK 689 (726)
Q Consensus 647 ~~~~~~e~~~i~~~l~~~~~WL~~~-~-~~a~~~~~~~kl~~L~~ 689 (726)
..+-|+-+..|...+.++++||... + .....++|.+-...|.+
T Consensus 62 ~~mipd~~~RL~~a~~~L~~~l~~~~~~~~~~~ee~~~Ak~~l~~ 106 (116)
T 3mxz_A 62 RMMIPDCHKRLESALADLKSTLAELEETDEKEGPEIEDAKKTVAD 106 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCCCHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHHH
Confidence 3455778889999999999999853 2 33556777776666654
No 168
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=22.90 E-value=83 Score=31.83 Aligned_cols=46 Identities=11% Similarity=0.126 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCC
Q 004867 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGK 357 (726)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~ 357 (726)
.....+...++++|+++++++++|+.|++-++++++ -+.+.+.||.
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg~ 274 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQL 274 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcCC
Confidence 345677888999999999999999999999988764 3346667774
No 169
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=22.81 E-value=40 Score=37.81 Aligned_cols=48 Identities=23% Similarity=0.347 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHHHcCCCC--CCccEEEEEcCCCChHHHHHHHHHHcC
Q 004867 309 PILERVKRPLEKALAETGLSV--EDVHMVEVVGSSSRVPAIIKILTEFFG 356 (726)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~srip~v~~~l~~~fg 356 (726)
||=..|++-|..+......++ .=.+.|++|||+|.+|.+.-.|.+.+.
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~ 525 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRIN 525 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHH
Confidence 444455555554333222221 124689999999999999999999885
No 170
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=22.67 E-value=1.9e+02 Score=30.91 Aligned_cols=23 Identities=17% Similarity=0.215 Sum_probs=21.0
Q ss_pred CceEEEEEeCCceeEEEEEEeeC
Q 004867 193 QLNVAFVDIGHASLQVCIAGFKK 215 (726)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~~ 215 (726)
...++.+|+||.++-+.+++..+
T Consensus 67 ~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 67 TGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CEEEEEEEESSSSEEEEEEEECC
T ss_pred cceEEEEEeCCCeEEEEEEecCC
Confidence 56789999999999999999976
No 171
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=21.54 E-value=56 Score=33.39 Aligned_cols=37 Identities=8% Similarity=0.244 Sum_probs=15.9
Q ss_pred EEEEEcCccceEEEEEE-CCc--eEEE--eCCCCCcccceEE
Q 004867 3 VVGFDLGNESCIVAVAR-QRG--IDVV--LNDESKRETPSIV 39 (726)
Q Consensus 3 vvGID~GTt~s~va~~~-~~~--~~ii--~n~~g~~~~PS~V 39 (726)
++|+|+|..|++++... +|. +..+ +-+.|....+..+
T Consensus 2 iiG~DIGGAn~K~a~~~~~g~~~~~~~~~PlW~~~~~L~~~l 43 (334)
T 3cet_A 2 ILGIDIGGANTKITELHENGEFKVHHLYFPMWKNNDKLAEVL 43 (334)
T ss_dssp EEEEEEC--CEEEEEECSTTCCEEEEC---------------
T ss_pred eeEEEecccceeeeeecCCCceEEEEEecCCcCCchHHHHHH
Confidence 78999999999999876 343 2222 3455544444444
No 172
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=21.45 E-value=7.6e+02 Score=29.49 Aligned_cols=12 Identities=0% Similarity=0.014 Sum_probs=4.7
Q ss_pred HHHHHHHHHHHH
Q 004867 654 RELFTSKLQETE 665 (726)
Q Consensus 654 ~~~i~~~l~~~~ 665 (726)
++.+.+.++++.
T Consensus 1007 ~~~lee~~~~~~ 1018 (1080)
T 2dfs_A 1007 KKTIEEWADKYK 1018 (1080)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333344443333
No 173
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=21.40 E-value=74 Score=33.30 Aligned_cols=47 Identities=17% Similarity=0.304 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCccEEEEEcCCCChHHHHHHHHHHcCCC
Q 004867 309 PILERVKRPLEKALAETGLSVEDVHMVEVVGSSSRVPAIIKILTEFFGKE 358 (726)
Q Consensus 309 ~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~srip~v~~~l~~~fg~~ 358 (726)
...+.+...++++|+++|+++++|+.|++-+++.++ -+.+.+.+|.+
T Consensus 284 ~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lgl~ 330 (393)
T 1ted_A 284 YIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLGIS 330 (393)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcCCC
Confidence 455677788999999999999999999998887654 45577777754
No 174
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=21.29 E-value=67 Score=31.84 Aligned_cols=20 Identities=20% Similarity=0.205 Sum_probs=17.4
Q ss_pred eEEEEEcCccceEEEEEE-CC
Q 004867 2 SVVGFDLGNESCIVAVAR-QR 21 (726)
Q Consensus 2 ~vvGID~GTt~s~va~~~-~~ 21 (726)
.++.||.|+|+++++++. ++
T Consensus 24 M~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 24 MILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp EEEEEEECSSCEEEEEEETTT
T ss_pred cEEEEEeCCCeeEEEEEeCCC
Confidence 368999999999999988 54
No 175
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=20.85 E-value=3.6e+02 Score=27.40 Aligned_cols=69 Identities=22% Similarity=0.236 Sum_probs=47.8
Q ss_pred CceEEEEEeCCceeEEEEEEee-CCeEEEEEEe-cCCCccchHHHHHHHHHHHHHHHhhhccCccCCHHHHHHHHHHHHH
Q 004867 193 QLNVAFVDIGHASLQVCIAGFK-KGQLKILGHS-FDRSVGGRDFDEVLFQHFAAKFKEEYKIDVSQNARASLRLRVACEK 270 (726)
Q Consensus 193 ~~~vlv~D~Gggt~dvsvv~~~-~~~~~vl~~~-~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~ 270 (726)
...+.++|+|..++-+.|+++. ++.++++... ....||-. ++. . -.-++.++.|++.+...
T Consensus 15 ~~~~A~IDiGSNsiRL~I~~~~~~~~~~~i~~~k~~vrLg~g-~~~-------------~---g~ls~eai~r~~~aL~~ 77 (343)
T 3cer_A 15 SVTVAGIDCGTNSIRLKIARVDADGMHEVVPRILRVIRLGQD-VDK-------------T---HRFADEALERAYVAARE 77 (343)
T ss_dssp CEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEEECCCTTTT-HHH-------------H---SSCCHHHHHHHHHHHHH
T ss_pred CCeEEEEEcccceeEeEEEEEcCCCCEEEEEEEEEEeeCCCC-ccc-------------c---CCcCHHHHHHHHHHHHH
Confidence 5679999999999999999998 4567766553 23445532 220 0 12356788888888888
Q ss_pred HhhhcCCC
Q 004867 271 LKKVLSAN 278 (726)
Q Consensus 271 ~K~~Ls~~ 278 (726)
.+..+...
T Consensus 78 f~~~~~~~ 85 (343)
T 3cer_A 78 FAGVIAEH 85 (343)
T ss_dssp HHHHHTTS
T ss_pred HHHHHHHC
Confidence 88877543
No 176
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=20.16 E-value=8.9 Score=38.61 Aligned_cols=60 Identities=10% Similarity=-0.122 Sum_probs=32.3
Q ss_pred cCcEEEEecCCCCHHHHHHHHHHHHH-hCC-CceeeechhHHHHHHhhhhcCCCCCCCCceEEEEEeCCcee
Q 004867 137 VVDCCIGIPVYFTDLQRRAVIDAATI-AGL-HPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDIGHASL 206 (726)
Q Consensus 137 ~~~~VitVPa~f~~~qR~~l~~Aa~~-AGl-~~~~li~Ep~AaAl~y~~~~~~~~~~~~~~vlv~D~Gggt~ 206 (726)
+..+.|++|..- ......+++..+. .++ ..+.+.|+..||+++-. . ....+++=+|-|.-
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~----g-----~~~~v~v~~GTGi~ 119 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC----G-----QKAGIACILGTGSN 119 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT----T-----TSCBEEEEESSSEE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc----C-----CCCcEEEEeCCChh
Confidence 345677777753 2111234444333 454 36889999999988542 1 22334444777763
Done!