Query 004872
Match_columns 726
No_of_seqs 559 out of 3234
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:25:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004872.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004872hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 7.5E-33 2.6E-37 290.0 32.3 219 379-611 19-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 3.4E-32 1.2E-36 286.6 19.1 219 379-611 20-276 (296)
3 2r83_A Synaptotagmin-1; C2A-C2 100.0 1.8E-29 6.1E-34 264.4 28.1 230 183-481 16-274 (284)
4 1dqv_A Synaptotagmin III; beta 100.0 1.2E-28 4.3E-33 259.3 17.1 228 183-479 17-275 (296)
5 2fk9_A Protein kinase C, ETA t 99.8 1.4E-20 4.7E-25 177.1 11.6 115 506-622 25-155 (157)
6 2dmh_A Myoferlin; beta-sandwic 99.8 1E-19 3.5E-24 169.1 16.5 119 507-627 4-135 (140)
7 2z0u_A WW domain-containing pr 99.8 8.2E-20 2.8E-24 172.4 14.2 115 481-609 28-154 (155)
8 2ep6_A MCTP2 protein; beta san 99.8 6.2E-20 2.1E-24 169.0 13.0 118 503-622 6-130 (133)
9 1rlw_A Phospholipase A2, CALB 99.8 1.1E-19 3.8E-24 165.5 13.5 113 509-622 2-123 (126)
10 1wfj_A Putative elicitor-respo 99.8 5.8E-20 2E-24 169.8 11.6 121 506-627 6-132 (136)
11 1rsy_A Synaptotagmin I; calciu 99.8 3.2E-19 1.1E-23 168.2 16.4 117 481-611 27-151 (152)
12 2d8k_A Synaptotagmin VII; exoc 99.8 1.8E-19 6.3E-24 167.6 14.5 118 481-612 11-137 (141)
13 3b7y_A E3 ubiquitin-protein li 99.8 2.2E-19 7.5E-24 169.5 15.2 119 506-625 16-153 (153)
14 2bwq_A Regulating synaptic mem 99.8 2E-19 6.9E-24 164.5 14.4 113 482-609 4-129 (129)
15 3kwu_A MUNC13-1; calcium bindi 99.8 4.6E-19 1.6E-23 166.3 17.0 114 508-623 15-146 (148)
16 3f04_A Synaptotagmin-1; C2A, c 99.8 4E-19 1.4E-23 165.7 16.2 116 481-610 19-142 (143)
17 3fdw_A Synaptotagmin-like prot 99.8 1.6E-19 5.6E-24 169.4 11.0 117 481-611 8-135 (148)
18 1v27_A Regulating synaptic mem 99.8 2.7E-19 9.1E-24 166.4 12.1 120 480-614 5-137 (141)
19 2b3r_A Phosphatidylinositol-4- 99.8 9.1E-19 3.1E-23 161.3 15.5 105 508-613 18-133 (134)
20 3fbk_A RGS3, RGP3, regulator o 99.8 5.3E-19 1.8E-23 166.9 13.9 119 481-614 12-141 (153)
21 3m7f_B E3 ubiquitin-protein li 99.8 8.6E-19 3E-23 169.5 15.7 120 506-626 4-142 (176)
22 1gmi_A Protein kinase C, epsil 99.8 4E-19 1.4E-23 164.2 12.7 113 508-622 4-131 (136)
23 1wfm_A Synaptotagmin XIII; C2 99.8 1E-18 3.4E-23 161.9 14.2 115 481-612 11-134 (138)
24 2chd_A Rabphilin-3A, exophilin 99.8 1.2E-18 4.1E-23 162.2 14.3 116 481-610 14-140 (142)
25 2dmg_A KIAA1228 protein; beta- 99.8 1.4E-18 4.6E-23 161.9 14.1 116 481-611 9-136 (142)
26 1rh8_A Piccolo protein; beta-s 99.8 3.3E-19 1.1E-23 166.0 9.4 116 481-612 5-140 (142)
27 1a25_A CALB, protein kinase C 99.8 4.9E-19 1.7E-23 166.3 10.3 118 481-615 18-144 (149)
28 3rdl_A Protein kinase C alpha 99.8 7.3E-19 2.5E-23 162.5 11.3 117 481-614 3-128 (137)
29 2enp_A B/K protein; C2 type 1, 99.8 1.5E-18 5.1E-23 162.6 13.3 117 481-611 11-142 (147)
30 1tjx_A Similar to synaptotagmi 99.8 4E-18 1.4E-22 161.9 16.3 117 481-611 10-148 (159)
31 3n5a_A Synaptotagmin-7; calciu 99.8 2.4E-18 8.1E-23 159.3 14.0 114 482-609 2-137 (138)
32 1ugk_A Synaptotagmin IV, KIAA1 99.8 4.2E-18 1.4E-22 157.7 15.3 117 481-611 7-134 (138)
33 3pyc_A E3 ubiquitin-protein li 99.8 2.5E-18 8.5E-23 158.0 13.6 115 508-622 3-131 (132)
34 2cm5_A Rabphilin-3A; protein t 99.8 6.7E-18 2.3E-22 161.5 16.3 116 481-610 22-159 (166)
35 2q3x_A Regulating synaptic mem 99.8 2.8E-18 9.7E-23 164.9 13.5 116 480-611 16-140 (171)
36 2nq3_A Itchy homolog E3 ubiqui 99.7 3.8E-18 1.3E-22 164.0 11.4 116 507-622 33-159 (173)
37 2fk9_A Protein kinase C, ETA t 99.7 1E-17 3.4E-22 157.5 13.9 111 379-492 29-156 (157)
38 1w15_A Synaptotagmin IV; metal 99.7 1.3E-17 4.4E-22 157.3 14.8 101 481-595 15-125 (153)
39 1rlw_A Phospholipase A2, CALB 99.7 1.9E-17 6.4E-22 150.7 13.0 113 379-491 3-123 (126)
40 2dmh_A Myoferlin; beta-sandwic 99.7 4.5E-17 1.6E-21 151.1 15.7 115 379-494 7-134 (140)
41 1wfj_A Putative elicitor-respo 99.7 3E-17 1E-21 151.5 14.4 119 378-496 9-133 (136)
42 3kwu_A MUNC13-1; calcium bindi 99.7 7.6E-17 2.6E-21 151.1 17.4 112 379-492 17-146 (148)
43 2ep6_A MCTP2 protein; beta san 99.7 3.4E-17 1.2E-21 150.6 13.7 112 379-492 13-131 (133)
44 3b7y_A E3 ubiquitin-protein li 99.7 5.8E-17 2E-21 152.8 14.4 117 377-493 18-153 (153)
45 1gmi_A Protein kinase C, epsil 99.7 9E-17 3.1E-21 148.3 13.2 112 379-493 6-133 (136)
46 3m7f_B E3 ubiquitin-protein li 99.7 2.2E-16 7.6E-21 152.5 14.7 116 379-494 8-142 (176)
47 2d8k_A Synaptotagmin VII; exoc 99.7 1.2E-15 4.1E-20 141.6 15.4 103 379-481 26-137 (141)
48 2b3r_A Phosphatidylinositol-4- 99.7 7.8E-16 2.7E-20 141.6 13.8 103 379-482 20-133 (134)
49 3rdl_A Protein kinase C alpha 99.7 6.6E-16 2.3E-20 142.5 13.2 106 379-485 16-130 (137)
50 3pyc_A E3 ubiquitin-protein li 99.7 1.1E-15 3.8E-20 140.2 14.3 111 380-491 6-131 (132)
51 1v27_A Regulating synaptic mem 99.7 7.2E-16 2.5E-20 143.0 13.0 105 379-484 21-138 (141)
52 3fbk_A RGS3, RGP3, regulator o 99.6 9.6E-16 3.3E-20 144.4 13.9 104 379-483 27-141 (153)
53 1rsy_A Synaptotagmin I; calciu 99.6 1.4E-15 4.8E-20 143.1 14.9 102 379-480 42-151 (152)
54 2nq3_A Itchy homolog E3 ubiqui 99.6 7.2E-16 2.5E-20 148.0 12.7 117 379-496 36-164 (173)
55 3f04_A Synaptotagmin-1; C2A, c 99.6 1.1E-15 3.9E-20 142.1 13.4 101 379-479 34-142 (143)
56 2bwq_A Regulating synaptic mem 99.6 1.5E-15 5.2E-20 138.6 13.8 99 379-478 18-129 (129)
57 3jzy_A Intersectin 2; C2 domai 99.6 6.3E-16 2.2E-20 175.0 13.5 118 506-623 383-507 (510)
58 2cjt_A UNC-13 homolog A, MUNC1 99.6 2E-15 6.8E-20 138.1 13.4 95 508-608 3-102 (131)
59 1a25_A CALB, protein kinase C 99.6 7.9E-16 2.7E-20 144.3 10.8 105 380-485 32-145 (149)
60 2z0u_A WW domain-containing pr 99.6 1.2E-15 4.1E-20 143.8 11.9 100 379-478 43-154 (155)
61 3fdw_A Synaptotagmin-like prot 99.6 1.3E-15 4.5E-20 142.6 11.7 103 379-481 23-136 (148)
62 3l9b_A Otoferlin; C2-domain, b 99.6 2.4E-15 8.2E-20 135.5 12.7 112 508-624 19-140 (144)
63 2chd_A Rabphilin-3A, exophilin 99.6 5.3E-15 1.8E-19 137.4 14.3 101 379-479 29-140 (142)
64 1rh8_A Piccolo protein; beta-s 99.6 1.5E-15 5.2E-20 141.1 8.9 102 380-481 19-140 (142)
65 1wfm_A Synaptotagmin XIII; C2 99.6 1E-14 3.4E-19 134.9 14.0 100 379-481 26-134 (138)
66 2dmg_A KIAA1228 protein; beta- 99.6 8.8E-15 3E-19 135.9 13.6 102 379-481 24-137 (142)
67 1ugk_A Synaptotagmin IV, KIAA1 99.6 2.5E-14 8.6E-19 132.1 16.4 102 379-480 22-134 (138)
68 2q3x_A Regulating synaptic mem 99.6 4.1E-15 1.4E-19 142.8 11.3 103 379-481 30-141 (171)
69 2enp_A B/K protein; C2 type 1, 99.6 7.3E-15 2.5E-19 137.3 12.4 103 379-481 26-143 (147)
70 3n5a_A Synaptotagmin-7; calciu 99.6 1.7E-14 6E-19 133.1 14.8 88 379-466 16-113 (138)
71 1tjx_A Similar to synaptotagmi 99.6 2E-14 6.8E-19 136.3 14.6 105 379-483 25-151 (159)
72 3nsj_A Perforin-1; pore formin 99.6 1.2E-14 4.2E-19 162.6 15.1 110 506-623 390-503 (540)
73 2cjt_A UNC-13 homolog A, MUNC1 99.6 4.6E-15 1.6E-19 135.6 9.6 87 184-298 3-90 (131)
74 2cjs_A UNC-13 homolog A, MUNC1 99.6 2.3E-14 7.8E-19 136.5 13.6 85 508-598 12-99 (167)
75 2cm5_A Rabphilin-3A; protein t 99.6 6.7E-14 2.3E-18 133.6 16.0 100 379-480 37-146 (166)
76 1w15_A Synaptotagmin IV; metal 99.5 1E-13 3.5E-18 130.4 14.8 99 379-479 30-138 (153)
77 2cjs_A UNC-13 homolog A, MUNC1 99.5 2.3E-14 7.9E-19 136.5 9.4 87 184-298 12-99 (167)
78 3nsj_A Perforin-1; pore formin 99.5 1.7E-13 6E-18 153.3 15.6 87 184-294 392-481 (540)
79 1cjy_A CPLA2, protein (cytosol 99.5 5.3E-14 1.8E-18 162.1 11.5 109 507-618 15-132 (749)
80 3jzy_A Intersectin 2; C2 domai 99.5 1.9E-13 6.6E-18 154.5 14.0 115 378-492 386-507 (510)
81 1djx_A PLC-D1, phosphoinositid 99.5 2.9E-13 1E-17 154.9 15.3 113 507-622 494-622 (624)
82 3l9b_A Otoferlin; C2-domain, b 99.4 1E-12 3.4E-17 118.5 12.9 111 380-495 22-142 (144)
83 3bxj_A RAS GTPase-activating p 99.3 7.9E-14 2.7E-18 155.6 0.2 97 508-609 9-115 (483)
84 1cjy_A CPLA2, protein (cytosol 99.3 2.5E-12 8.4E-17 148.3 9.8 92 183-298 15-114 (749)
85 3pfq_A PKC-B, PKC-beta, protei 99.3 8.8E-12 3E-16 145.4 10.4 112 482-610 160-280 (674)
86 1djx_A PLC-D1, phosphoinositid 99.2 6.6E-11 2.2E-15 135.4 15.3 112 378-492 496-623 (624)
87 3bxj_A RAS GTPase-activating p 99.2 1.2E-12 4.1E-17 146.0 -0.1 98 377-479 9-116 (483)
88 3qr0_A Phospholipase C-beta (P 99.1 3.4E-10 1.2E-14 131.9 13.1 104 508-622 648-769 (816)
89 3ohm_B 1-phosphatidylinositol- 99.0 5.5E-10 1.9E-14 130.8 11.1 103 509-622 724-843 (885)
90 2zkm_X 1-phosphatidylinositol- 99.0 8.5E-10 2.9E-14 129.3 12.3 105 507-622 675-797 (799)
91 3pfq_A PKC-B, PKC-beta, protei 99.0 7.5E-10 2.6E-14 129.0 10.4 105 379-484 172-285 (674)
92 1yrk_A NPKC-delta, protein kin 98.9 1.5E-08 5.1E-13 88.5 12.8 108 509-622 5-123 (126)
93 2enj_A NPKC-theta, protein kin 98.9 2.8E-08 9.7E-13 87.9 13.2 109 508-622 8-128 (138)
94 1yrk_A NPKC-delta, protein kin 98.7 2.4E-07 8.4E-12 80.9 14.4 107 380-492 7-124 (126)
95 3ohm_B 1-phosphatidylinositol- 98.7 5.4E-08 1.9E-12 114.0 12.7 105 379-493 725-845 (885)
96 2zkm_X 1-phosphatidylinositol- 98.7 6.5E-08 2.2E-12 113.4 13.0 104 378-491 677-797 (799)
97 3qr0_A Phospholipase C-beta (P 98.7 9.1E-08 3.1E-12 111.5 14.0 105 379-493 650-771 (816)
98 2enj_A NPKC-theta, protein kin 98.6 3.9E-07 1.3E-11 80.6 11.8 107 380-492 11-129 (138)
99 2yrb_A Protein fantom; beta sa 93.4 0.74 2.5E-05 41.9 11.4 122 504-627 12-153 (156)
100 3l4c_A Dedicator of cytokinesi 89.2 3.6 0.00012 39.7 11.9 55 240-294 78-138 (220)
101 2wxf_A Phosphatidylinositol-4, 85.3 3.4 0.00012 48.9 11.1 86 509-597 216-325 (940)
102 2yrb_A Protein fantom; beta sa 82.2 13 0.00044 33.8 11.1 112 380-492 19-149 (156)
103 3l4c_A Dedicator of cytokinesi 81.7 17 0.00057 35.0 12.3 52 412-463 78-138 (220)
104 2wxf_A Phosphatidylinositol-4, 80.4 3.5 0.00012 48.8 8.6 86 184-294 215-322 (940)
105 3hhm_A Phosphatidylinositol-4, 74.0 9.3 0.00032 45.7 9.7 87 509-597 354-456 (1091)
106 1e7u_A Phosphatidylinositol 3- 68.8 18 0.00063 42.8 10.6 87 510-597 218-331 (961)
107 3hhm_A Phosphatidylinositol-4, 64.7 26 0.0009 41.9 10.8 100 379-490 355-469 (1091)
108 2y3a_A Phosphatidylinositol-4, 64.0 5.2 0.00018 48.0 4.8 69 184-277 351-430 (1092)
109 2y3a_A Phosphatidylinositol-4, 55.1 6.4 0.00022 47.2 3.4 85 509-596 352-470 (1092)
110 1e7u_A Phosphatidylinositol 3- 48.5 68 0.0023 38.0 10.7 85 380-465 219-330 (961)
111 2cb2_A Sulfur oxygenase reduct 23.5 78 0.0027 31.1 4.6 42 9-52 173-234 (318)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=7.5e-33 Score=290.03 Aligned_cols=219 Identities=26% Similarity=0.452 Sum_probs=193.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~- 450 (726)
+.|.|+|++|++|+.++..|.+||||+++++ ...++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~ 98 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCC
Confidence 4899999999999999999999999999994 458899999 999999999999997642 57899999999988
Q ss_pred CCcceEEEEEEccccccCCeeeeeeecccc------ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcc
Q 004872 451 GDENMGSARVNLEGLVEGSVRDIWVPLEKV------NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVA 524 (726)
Q Consensus 451 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~------~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~ 524 (726)
++++||++.++|.++..+.....|++|... ..|+|.+++.|. +..+.|.|.|++|++|+.
T Consensus 99 ~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~--------------p~~~~l~v~v~~a~~L~~ 164 (284)
T 2r83_A 99 KHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV--------------PTAGKLTVVILEAKNLKK 164 (284)
T ss_dssp CCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCC
T ss_pred CCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec--------------CcCCceEEEEEEeECCCC
Confidence 799999999999999887788899999753 359999999987 567899999999999999
Q ss_pred cccCCCCccEEEEEEC--C---eEEEeEeeeCCCCCeeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEcc
Q 004872 525 ADLRGTSDPYVKVQYG--D---LKKRTKVIFKTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQ 594 (726)
Q Consensus 525 ~d~~g~~DPyv~v~~~--~---~~~kT~v~~~t~nP~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~ 594 (726)
.+..|.+||||++++. + .+++|+++++|+||+|||+|.|.+. ...|.|+|||+|.+++|++||++.+++.
T Consensus 165 ~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~ 244 (284)
T 2r83_A 165 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYN 244 (284)
T ss_dssp CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETT
T ss_pred cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCC
Confidence 9999999999999984 2 4679999999999999999999985 2469999999999999999999999997
Q ss_pred cc------------CCCCceeeEEecCCC
Q 004872 595 RL------------PPNQMADKWIPLQGV 611 (726)
Q Consensus 595 ~l------------~~~~~~~~w~~L~~~ 611 (726)
.+ .++....+||+|.+.
T Consensus 245 ~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 245 STGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 53 345677899999763
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.98 E-value=3.4e-32 Score=286.56 Aligned_cols=219 Identities=27% Similarity=0.432 Sum_probs=189.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~- 450 (726)
+.|.|+|++|++|+.+|..|.+||||++++ +++.++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~ 99 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFS 99 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSS
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCC
Confidence 389999999999999999999999999999 5778999999 999999999999997543 45899999999988
Q ss_pred CCcceEEEEEE-cccccc-CCeeeeeeecccc-----ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCc
Q 004872 451 GDENMGSARVN-LEGLVE-GSVRDIWVPLEKV-----NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLV 523 (726)
Q Consensus 451 ~d~~iG~~~i~-L~~l~~-~~~~~~w~~L~~~-----~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~ 523 (726)
++++||++.++ +.++.. ......|++|... ..|+|.+++.|. +..|.|+|+|++|++|+
T Consensus 100 ~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~--------------~~~~~l~v~v~~a~~L~ 165 (296)
T 1dqv_A 100 RHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYL--------------PTAGLLTVTIIKASNLK 165 (296)
T ss_dssp CCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCC
T ss_pred CCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEec--------------cccceeEEEEEEeecCC
Confidence 89999999995 555543 2345689999753 359999999987 55799999999999999
Q ss_pred ccccCCCCccEEEEEEC--C---eEEEeEeeeCCCCCeeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEc
Q 004872 524 AADLRGTSDPYVKVQYG--D---LKKRTKVIFKTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEY 593 (726)
Q Consensus 524 ~~d~~g~~DPyv~v~~~--~---~~~kT~v~~~t~nP~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l 593 (726)
++|..|.+||||++++. + .+++|+++++++||+|||+|.|.+. ...|.|+|||+|.+++|++||++.+++
T Consensus 166 ~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l 245 (296)
T 1dqv_A 166 AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGP 245 (296)
T ss_dssp CCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSS
T ss_pred ccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECC
Confidence 99999999999999995 2 5789999999999999999999985 347999999999999999999999999
Q ss_pred cccC-------------CCCceeeEEecCCC
Q 004872 594 QRLP-------------PNQMADKWIPLQGV 611 (726)
Q Consensus 594 ~~l~-------------~~~~~~~w~~L~~~ 611 (726)
..+. .+.+..+|++|.+.
T Consensus 246 ~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 246 EAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred ccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 8653 34567788888753
No 3
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.97 E-value=1.8e-29 Score=264.37 Aligned_cols=230 Identities=19% Similarity=0.244 Sum_probs=180.3
Q ss_pred ccccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEEc----cEEeeeecCCCCCCccccee
Q 004872 183 AVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE----ELTRRTDARPGSDPRWDSMF 258 (726)
Q Consensus 183 ~~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~g----~~~rTt~i~~t~nP~WnEtf 258 (726)
...|.|.|+|++|++|+..|..|.+ ||||+|+++ ...+|+++++++||+|||+|
T Consensus 16 ~~~~~L~v~v~~a~~L~~~d~~~~~----------------------dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f 73 (284)
T 2r83_A 16 FQNNQLLVGIIQAAELPALDMGGTS----------------------DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQF 73 (284)
T ss_dssp TTTTEEEEEEEEEECCCCCSSSSSC----------------------CEEEEEEEETCTTSCEECCCCCSCSSCEEEEEE
T ss_pred CCCCEEEEEEEEeeCCCCCCCCCCC----------------------CeEEEEEEEcCCCceEeCCcccCCCCCeeCceE
Confidence 3569999999999999998876655 999999995 35778889999999999999
Q ss_pred EEEEecC---CceEEEEEEEeCCCCCCcceeEEEEEeceeccCCCcceeecCCCCccccccccccCceeeeeeecCCccc
Q 004872 259 NMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVNS 335 (726)
Q Consensus 259 ~~~v~~~---~~~L~~~V~D~d~~~~~dd~lG~~~i~L~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 335 (726)
.|.+... .+.|.|+|||+|.. .++++||++.++|.++..... ...|+.+..... ......
T Consensus 74 ~f~v~~~~~~~~~l~~~V~d~d~~-~~~~~lG~~~i~l~~l~~~~~-----------~~~w~~L~~~~~-----~~~~~~ 136 (284)
T 2r83_A 74 TFKVPYSELAGKTLVMAVYDFDRF-SKHDIIGEFKVPMNTVDFGHV-----------TEEWRDLQSAEK-----EEQEKL 136 (284)
T ss_dssp EECCCGGGCTTCEEEEEEEECCSS-SCCCEEEEEEEEGGGCCCSSC-----------EEEEEECBCCSS-----CCCCCC
T ss_pred EEEechHHhCcCEEEEEEEECCCC-CCCceeEEEEEcchhcccCCc-----------ceeEEEeecccc-----cccccc
Confidence 9998643 57999999999986 789999999999999874321 223332211100 011235
Q ss_pred cEEEEEEEeeeeecCCCCCCCCCccCCCCcccccCCccccCCccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---
Q 004872 336 GELTVRLVLKEWQFSDGSHSLNNFHSGSQQSLSGSSNFISRTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYG--K--- 410 (726)
Q Consensus 336 G~l~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~--- 410 (726)
|++.+.+.+. | ..+.|.|+|++|++|+.++.+|.+||||++++. +
T Consensus 137 G~i~l~l~~~-------------------------p-----~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~ 186 (284)
T 2r83_A 137 GDICFSLRYV-------------------------P-----TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRL 186 (284)
T ss_dssp CEEEEEEEEE-------------------------T-----TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEE
T ss_pred ccEEEEEEec-------------------------C-----cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEe
Confidence 7877665321 0 123899999999999999999999999999992 2
Q ss_pred eEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-CCcceEEEEEEccccc------------cCCeeee
Q 004872 411 IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDENMGSARVNLEGLV------------EGSVRDI 473 (726)
Q Consensus 411 ~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~-~d~~iG~~~i~L~~l~------------~~~~~~~ 473 (726)
.+++|+++ ++.||.|||.|.|.+... ...|.|+|||++.. ++++||++.+++..+. .+....+
T Consensus 187 ~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~ 266 (284)
T 2r83_A 187 KKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQ 266 (284)
T ss_dssp EEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEE
T ss_pred eeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchhe
Confidence 47899999 999999999999997654 45799999999988 8999999999998632 1235678
Q ss_pred eeeccccc
Q 004872 474 WVPLEKVN 481 (726)
Q Consensus 474 w~~L~~~~ 481 (726)
|++|.+..
T Consensus 267 W~~L~~~~ 274 (284)
T 2r83_A 267 WHTLQVEE 274 (284)
T ss_dssp EEECBCHH
T ss_pred eeecCCcc
Confidence 99998754
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.96 E-value=1.2e-28 Score=259.31 Aligned_cols=228 Identities=19% Similarity=0.251 Sum_probs=175.1
Q ss_pred ccccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEE---c-cEEeeeecCCCCCCccccee
Q 004872 183 AVGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL---E-ELTRRTDARPGSDPRWDSMF 258 (726)
Q Consensus 183 ~~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~---g-~~~rTt~i~~t~nP~WnEtf 258 (726)
...|.|.|+|++|++|+..|..|.+ ||||+|++ + ...+|+++++++||+|||+|
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~----------------------dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f 74 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFS----------------------DPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETF 74 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCC----------------------CEEEEEECTTSTTSCEECCCCCSCSSCEEEEEE
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCc----------------------CeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEE
Confidence 3569999999999999999877755 99999999 3 46788899999999999999
Q ss_pred EEEEecC---CceEEEEEEEeCCCCCCcceeEEEEEe-ceeccCCCcceeecCCCCccccccccccCceeeeeeecCCcc
Q 004872 259 NMVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVK-MKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGVN 334 (726)
Q Consensus 259 ~~~v~~~---~~~L~~~V~D~d~~~~~dd~lG~~~i~-L~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 334 (726)
.|.+... ...|.|+|||+|.. .++++||++.++ +.++.+... ....|+.+... .-....
T Consensus 75 ~f~v~~~~l~~~~L~~~V~d~d~~-~~~~~iG~~~i~~l~~~~~~~~----------~~~~w~~L~~~------~~~~~~ 137 (296)
T 1dqv_A 75 QFSVPLAELAQRKLHFSVYDFDRF-SRHDLIGQVVLDNLLELAEQPP----------DRPLWRDILEG------GSEKAD 137 (296)
T ss_dssp EEECCGGGGSSCCCEEEEEECCSS-SCCCEEEEEECCCTTGGGSSCS----------SCCCCEECBCC------SSCCSC
T ss_pred EEEecHHHhcCCEEEEEEEEcCCC-CCCceEEEEEeccccccccCCc----------cceeeeccccc------cccccc
Confidence 9998543 45899999999986 789999999996 444432110 01123222110 001123
Q ss_pred ccEEEEEEEeeeeecCCCCCCCCCccCCCCcccccCCccccCCccEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C--
Q 004872 335 SGELTVRLVLKEWQFSDGSHSLNNFHSGSQQSLSGSSNFISRTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYG--K-- 410 (726)
Q Consensus 335 ~G~l~~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~-- 410 (726)
.|++.+.+.+.+ ..+.|.|+|++|++|..++..|.+||||++++. +
T Consensus 138 ~G~i~vsl~y~~------------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~ 187 (296)
T 1dqv_A 138 LGELNFSLCYLP------------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRR 187 (296)
T ss_dssp CCEEEEEEEEET------------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCT
T ss_pred cceEEEEEEecc------------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcC
Confidence 588877654321 124899999999999999999999999999994 2
Q ss_pred -eEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-CCcceEEEEEEcccccc-------------CCee
Q 004872 411 -IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDENMGSARVNLEGLVE-------------GSVR 471 (726)
Q Consensus 411 -~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~-~d~~iG~~~i~L~~l~~-------------~~~~ 471 (726)
.++||+++ ++.||.|||.|.|.+... ...|.|+|||++.. ++++||.+.+++..+.. +...
T Consensus 188 ~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~ 267 (296)
T 1dqv_A 188 LKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPV 267 (296)
T ss_dssp TSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCS
T ss_pred ccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCchhHHHHHHHHhCCCCce
Confidence 57899999 999999999999987654 35799999999988 89999999999987642 2234
Q ss_pred eeeeeccc
Q 004872 472 DIWVPLEK 479 (726)
Q Consensus 472 ~~w~~L~~ 479 (726)
.+|++|.+
T Consensus 268 ~~w~~L~~ 275 (296)
T 1dqv_A 268 EHWHQLVE 275 (296)
T ss_dssp CSCCCCBB
T ss_pred eEeeeccC
Confidence 56777765
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.83 E-value=1.4e-20 Score=177.06 Aligned_cols=115 Identities=24% Similarity=0.388 Sum_probs=103.2
Q ss_pred CCCceEEEEEEEEeecCccccc----------CCCCccEEEEEECCeE-EEeEeeeCCCCCeeeeEEEEecC-CCeEEEE
Q 004872 506 GSGNGWIELVIVEARDLVAADL----------RGTSDPYVKVQYGDLK-KRTKVIFKTLNPQWHQTLEFPDD-GSPLTLH 573 (726)
Q Consensus 506 ~~~~g~L~v~v~~a~~L~~~d~----------~g~~DPyv~v~~~~~~-~kT~v~~~t~nP~wne~~~f~v~-~~~l~i~ 573 (726)
....|.|+|+|++|++|+++|. .|.+||||++.+++++ .+|+++++|+||+|||+|.|.+. ...|.|+
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~~~L~~~ 104 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDGGHLELA 104 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEEE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCCCEEEEE
Confidence 3667999999999999998883 3679999999998865 69999999999999999999985 5789999
Q ss_pred EEECCCCCCCCeeEEEEEEccccCCC----CceeeEEecCCCCCeEEEEEEEE
Q 004872 574 VRDHNALLASSSIGDCVVEYQRLPPN----QMADKWIPLQGVRKGEIHVLITR 622 (726)
Q Consensus 574 V~d~d~~~~d~~lG~~~i~l~~l~~~----~~~~~w~~L~~~~~G~i~l~l~~ 622 (726)
|||+|.+++|++||++.|+|.++..+ ...+.|++|++ .|+|+++++|
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~ 155 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITL 155 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEE
T ss_pred EEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEE
Confidence 99999999999999999999998643 67899999975 8999999987
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=1e-19 Score=169.05 Aligned_cols=119 Identities=27% Similarity=0.413 Sum_probs=107.2
Q ss_pred CCceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeeeCCCCCeeeeEEEEecC------CCeEEEEEEECCCC
Q 004872 507 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD------GSPLTLHVRDHNAL 580 (726)
Q Consensus 507 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~~~f~v~------~~~l~i~V~d~d~~ 580 (726)
...|.|+|+|++|++|+..+. |.+||||++++++++++|+++++++||+|||+|.|.+. ...|.|+|||+|.+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 456899999999999999998 99999999999999999999999999999999999983 47899999999999
Q ss_pred CCCCeeEEEEEEccccCCCCceeeEEe---cCCC----CCeEEEEEEEEEecCc
Q 004872 581 LASSSIGDCVVEYQRLPPNQMADKWIP---LQGV----RKGEIHVLITRKVPEL 627 (726)
Q Consensus 581 ~~d~~lG~~~i~l~~l~~~~~~~~w~~---L~~~----~~G~i~l~l~~~~p~~ 627 (726)
++|++||++.++|.++..+...+.|++ |.+. ..|+|+++++| .|.+
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~-~p~~ 135 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGY-DPPS 135 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEE-CCCB
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEE-ECCC
Confidence 999999999999999988888899988 6442 34999999999 5543
No 7
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.82 E-value=8.2e-20 Score=172.38 Aligned_cols=115 Identities=10% Similarity=0.151 Sum_probs=105.0
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECC------eEEEeEeeeCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFKTLN 554 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~t~n 554 (726)
..|+|.+++.|. +..+.|+|+|++|+||+++|.+|.+||||++++.+ .++||+++++|+|
T Consensus 28 ~~G~l~~sl~y~--------------~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tln 93 (155)
T 2z0u_A 28 GATRIQIALKYD--------------EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDT 93 (155)
T ss_dssp CCEEEEEEEEEE--------------TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSS
T ss_pred CcEEEEEEEEEc--------------CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCC
Confidence 469999999988 56799999999999999999999999999999964 2789999999999
Q ss_pred CeeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccC-CCCceeeEEecC
Q 004872 555 PQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLP-PNQMADKWIPLQ 609 (726)
Q Consensus 555 P~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~-~~~~~~~w~~L~ 609 (726)
|+|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++. .+.....||+|.
T Consensus 94 P~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 94 LVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999999985 4689999999999999999999999999995 467789999985
No 8
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=6.2e-20 Score=168.97 Aligned_cols=118 Identities=25% Similarity=0.436 Sum_probs=107.8
Q ss_pred CCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeeeCCCCCeeeeEEEEecC--CCeEEEEEEECCCC
Q 004872 503 QNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDHNAL 580 (726)
Q Consensus 503 ~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~~~f~v~--~~~l~i~V~d~d~~ 580 (726)
..+....|.|+|+|++|++|++.+..|.+||||++++++++++|+++++++||+|||+|.|.+. ...|.|+|||+|.+
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~ 85 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGD 85 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETT
T ss_pred ccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCC
Confidence 4567889999999999999999999999999999999999999999999999999999999985 57899999999999
Q ss_pred CCCCeeEEEEEEccccCCCCceeeEEecCC-----CCCeEEEEEEEE
Q 004872 581 LASSSIGDCVVEYQRLPPNQMADKWIPLQG-----VRKGEIHVLITR 622 (726)
Q Consensus 581 ~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~-----~~~G~i~l~l~~ 622 (726)
++|++||++.+++.++..+. ..|++|.. ...|+|+++++|
T Consensus 86 ~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 86 KPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp EEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred CCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEE
Confidence 99999999999999997654 58999963 356999999998
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.1e-19 Score=165.54 Aligned_cols=113 Identities=20% Similarity=0.362 Sum_probs=102.3
Q ss_pred ceEEEEEEEEeecCcc---cccCCCCccEEEEEECC---eEEEeEeeeCCCCCeeeeEEEEecC---CCeEEEEEEECCC
Q 004872 509 NGWIELVIVEARDLVA---ADLRGTSDPYVKVQYGD---LKKRTKVIFKTLNPQWHQTLEFPDD---GSPLTLHVRDHNA 579 (726)
Q Consensus 509 ~g~L~v~v~~a~~L~~---~d~~g~~DPyv~v~~~~---~~~kT~v~~~t~nP~wne~~~f~v~---~~~l~i~V~d~d~ 579 (726)
.|.|+|+|++|++|++ .+..|.+||||++++++ .+++|+++++++||+|||+|.|.+. ...|.|+|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 5899999999999998 46779999999999985 7889999999999999999999983 5789999999998
Q ss_pred CCCCCeeEEEEEEccccCCCCceeeEEecCCCCCeEEEEEEEE
Q 004872 580 LLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGEIHVLITR 622 (726)
Q Consensus 580 ~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~l~~ 622 (726)
++ |++||++.++|..+..+.....|++|.+...|+|+++++-
T Consensus 82 ~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 VM-DETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp SC-CEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEEC
T ss_pred CC-CceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEe
Confidence 75 8999999999999999989999999998777888888764
No 10
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.81 E-value=5.8e-20 Score=169.82 Aligned_cols=121 Identities=21% Similarity=0.365 Sum_probs=108.6
Q ss_pred CCCceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeee-CCCCCeeeeEEEEecC--CCeEEEEEEECCCCCC
Q 004872 506 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD--GSPLTLHVRDHNALLA 582 (726)
Q Consensus 506 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~~~f~v~--~~~l~i~V~d~d~~~~ 582 (726)
..+.|.|+|+|++|++|++.+..|.+||||++++++++++|++++ +++||+|||+|.|.+. ...|.|+|||++.+++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCC
Confidence 457799999999999999999999999999999999999999998 8999999999999985 5789999999999999
Q ss_pred CCeeEEEEEEcccc-CCCCceeeEEecC--CCCCeEEEEEEEEEecCc
Q 004872 583 SSSIGDCVVEYQRL-PPNQMADKWIPLQ--GVRKGEIHVLITRKVPEL 627 (726)
Q Consensus 583 d~~lG~~~i~l~~l-~~~~~~~~w~~L~--~~~~G~i~l~l~~~~p~~ 627 (726)
|++||++.++|.++ ..+.....|++|. +...|+|+++++| .|..
T Consensus 86 d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~-~p~~ 132 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSF-KPSG 132 (136)
T ss_dssp TCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEE-EECC
T ss_pred CceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEE-EeCC
Confidence 99999999999998 4455678999995 3456999999999 6654
No 11
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=3.2e-19 Score=168.16 Aligned_cols=117 Identities=32% Similarity=0.464 Sum_probs=107.6
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE---CCeEEEeEeeeCCCCCee
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY---GDLKKRTKVIFKTLNPQW 557 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~v~~~t~nP~w 557 (726)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ +..+++|+++++++||+|
T Consensus 27 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~w 92 (152)
T 1rsy_A 27 KLGKLQYSLDYD--------------FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVF 92 (152)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEE
T ss_pred CceEEEEEEEEe--------------CCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcC
Confidence 469999999998 567999999999999999999999999999999 346889999999999999
Q ss_pred eeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCC
Q 004872 558 HQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 611 (726)
Q Consensus 558 ne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 611 (726)
||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+...+.|++|.+.
T Consensus 93 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 93 NEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred cccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 999999984 578999999999999999999999999999888889999999763
No 12
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=1.8e-19 Score=167.55 Aligned_cols=118 Identities=30% Similarity=0.455 Sum_probs=107.0
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEEC---CeEEEeEeeeCCCCCee
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG---DLKKRTKVIFKTLNPQW 557 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~---~~~~kT~v~~~t~nP~w 557 (726)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++. ..+++|+++++++||+|
T Consensus 11 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~w 76 (141)
T 2d8k_A 11 NLGRIQFSVGYN--------------FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHW 76 (141)
T ss_dssp CCCEEEEEEEEC--------------SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCC
T ss_pred eeeEEEEEEEEe--------------CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCcc
Confidence 369999999987 5679999999999999999999999999999994 36889999999999999
Q ss_pred eeEEEEec------CCCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC
Q 004872 558 HQTLEFPD------DGSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR 612 (726)
Q Consensus 558 ne~~~f~v------~~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 612 (726)
||+|.|.+ ....|.|+|||+|.+++|++||++.++|..+..+.....|++|.+..
T Consensus 77 ne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 77 NETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp CEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred ccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 99999985 25789999999999999999999999999998888899999997543
No 13
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.81 E-value=2.2e-19 Score=169.47 Aligned_cols=119 Identities=29% Similarity=0.410 Sum_probs=98.7
Q ss_pred CCCceEEEEEEEEeecCcccccCCCCccEEEEEECC------eEEEeEeeeCCCCCeeeeEEEEecC--CCeEEEEEEEC
Q 004872 506 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDH 577 (726)
Q Consensus 506 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~t~nP~wne~~~f~v~--~~~l~i~V~d~ 577 (726)
....+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++++||+|||+|.|.+. ...|.|+|||+
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 467799999999999999999999999999999963 5789999999999999999999985 56899999999
Q ss_pred CCCCCCCeeEEEEEEccccCCCCce------eeEEecCC-----CCCeEEEEEEEEEec
Q 004872 578 NALLASSSIGDCVVEYQRLPPNQMA------DKWIPLQG-----VRKGEIHVLITRKVP 625 (726)
Q Consensus 578 d~~~~d~~lG~~~i~l~~l~~~~~~------~~w~~L~~-----~~~G~i~l~l~~~~p 625 (726)
|.+++|++||++.++|.++..+... .+|++|.. ...|+|+++++| +|
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~-~P 153 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTY-LP 153 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEE-CC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEE-eC
Confidence 9999999999999999999765432 59999964 346999999998 54
No 14
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=2e-19 Score=164.51 Aligned_cols=113 Identities=26% Similarity=0.466 Sum_probs=98.1
Q ss_pred cceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE-----CCeEEEeEeeeCCCCCe
Q 004872 482 TGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNPQ 556 (726)
Q Consensus 482 ~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP~ 556 (726)
.|+|.++++|. +..+.|+|+|++|++|++.+..|.+||||++++ +..+++|+++++|+||+
T Consensus 4 ~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 69 (129)
T 2bwq_A 4 SGQLSIKLWFD--------------KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPK 69 (129)
T ss_dssp CCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCE
T ss_pred eEEEEEEEEEc--------------cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCc
Confidence 59999999998 567999999999999999999999999999999 34688999999999999
Q ss_pred eeeEEEEec-C-----CCeEEEEEEECCCCCC--CCeeEEEEEEccccCCCCceeeEEecC
Q 004872 557 WHQTLEFPD-D-----GSPLTLHVRDHNALLA--SSSIGDCVVEYQRLPPNQMADKWIPLQ 609 (726)
Q Consensus 557 wne~~~f~v-~-----~~~l~i~V~d~d~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~L~ 609 (726)
|||+|.|.+ . ...|.|+|||+|.+++ |++||++.++|.++.... .++||+|+
T Consensus 70 wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 70 WNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999999995 2 4789999999999987 999999999999987654 88999985
No 15
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.81 E-value=4.6e-19 Score=166.28 Aligned_cols=114 Identities=32% Similarity=0.533 Sum_probs=103.6
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeeeCCCCCeeeeEEEEecC--CCeEEEEEEECCCC-----
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDHNAL----- 580 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~~~f~v~--~~~l~i~V~d~d~~----- 580 (726)
..|.|+|+|++|++|++.+..|.+||||++++++++++|+++++++||.|||+|.|.+. ...|.|+|||+|..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~ 94 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRV 94 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccc
Confidence 46999999999999999999999999999999999999999999999999999999984 57899999999986
Q ss_pred ------CCCCeeEEEEEEccccCCCCceeeEEecCC-----CCCeEEEEEEEEE
Q 004872 581 ------LASSSIGDCVVEYQRLPPNQMADKWIPLQG-----VRKGEIHVLITRK 623 (726)
Q Consensus 581 ------~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~-----~~~G~i~l~l~~~ 623 (726)
++|++||++.++|.++. ...+.|++|.. ...|+|+++++|.
T Consensus 95 ~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 95 KQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 78999999999999993 45789999973 3469999999983
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.81 E-value=4e-19 Score=165.69 Aligned_cols=116 Identities=32% Similarity=0.468 Sum_probs=107.3
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE---CCeEEEeEeeeCCCCCee
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY---GDLKKRTKVIFKTLNPQW 557 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~v~~~t~nP~w 557 (726)
..|+|.++++|. +..+.|+|+|++|++|+..+..+.+||||++++ +..+++|+++++++||+|
T Consensus 19 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~w 84 (143)
T 3f04_A 19 KLGKLQYSLDYD--------------FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVF 84 (143)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEE
T ss_pred CeEEEEEEEEEe--------------CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcC
Confidence 469999999998 677999999999999999999999999999999 446889999999999999
Q ss_pred eeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCC
Q 004872 558 HQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQG 610 (726)
Q Consensus 558 ne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 610 (726)
||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+...+.|++|+.
T Consensus 85 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 85 NEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred cCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999974 47899999999999999999999999999998888999999974
No 17
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.80 E-value=1.6e-19 Score=169.37 Aligned_cols=117 Identities=22% Similarity=0.363 Sum_probs=105.5
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccc-cCCCCccEEEEEEC-----CeEEEeEeeeCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAAD-LRGTSDPYVKVQYG-----DLKKRTKVIFKTLN 554 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d-~~g~~DPyv~v~~~-----~~~~kT~v~~~t~n 554 (726)
..|+|.++++|. +..+.|+|+|++|++|+..+ ..|.+||||++++. ..+++|+++++|+|
T Consensus 8 ~~G~l~~sl~y~--------------~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~n 73 (148)
T 3fdw_A 8 VTGRIAFSLKYE--------------QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVN 73 (148)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSS
T ss_pred cceEEEEEEEEe--------------CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCC
Confidence 469999999998 66799999999999999988 68999999999995 24789999999999
Q ss_pred CeeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCC
Q 004872 555 PQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 611 (726)
Q Consensus 555 P~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 611 (726)
|+|||+|.|.+. ...|.|+|||+|.+++|++||++.++|..+..+.....|++|.+.
T Consensus 74 P~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 74 PLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp CEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred CcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 999999999985 346999999999999999999999999999877778899999864
No 18
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=2.7e-19 Score=166.37 Aligned_cols=120 Identities=25% Similarity=0.441 Sum_probs=106.4
Q ss_pred cccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE-----CCeEEEeEeeeCCCC
Q 004872 480 VNTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLN 554 (726)
Q Consensus 480 ~~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~n 554 (726)
...|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ ...+++|+++++|+|
T Consensus 5 ~~~G~i~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~n 70 (141)
T 1v27_A 5 SSGGQLSIKLWFD--------------KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLE 70 (141)
T ss_dssp CCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSS
T ss_pred CcccEEEEEEEEe--------------CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCC
Confidence 3579999999998 566999999999999999999999999999999 346889999999999
Q ss_pred CeeeeEEEEec-C-----CCeEEEEEEECCCCCC--CCeeEEEEEEccccCCCCceeeEEecCCCCCe
Q 004872 555 PQWHQTLEFPD-D-----GSPLTLHVRDHNALLA--SSSIGDCVVEYQRLPPNQMADKWIPLQGVRKG 614 (726)
Q Consensus 555 P~wne~~~f~v-~-----~~~l~i~V~d~d~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G 614 (726)
|+|||+|.|.+ . ...|.|+|||++.+++ |++||++.++|.++.... ...||+|.+...|
T Consensus 71 P~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 71 PKWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp CCCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred CccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 99999999994 2 4789999999999987 999999999999987654 8899999875544
No 19
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79 E-value=9.1e-19 Score=161.31 Aligned_cols=105 Identities=24% Similarity=0.376 Sum_probs=93.8
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEE-----CCeEEEeEeeeCCCCCeeeeEEEEe-cC-----CCeEEEEEEE
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNPQWHQTLEFP-DD-----GSPLTLHVRD 576 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP~wne~~~f~-v~-----~~~l~i~V~d 576 (726)
..+.|+|+|++|++|+. +.+|.+||||++++ ...+++|+++++|+||+|||+|.|. +. ...|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 35899999999999997 77899999999999 3467899999999999999999999 64 4799999999
Q ss_pred CCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCCC
Q 004872 577 HNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRK 613 (726)
Q Consensus 577 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~ 613 (726)
+|.+++|++||++.++|.++..+.....|++|.+...
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 9999999999999999999988888999999987543
No 20
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.79 E-value=5.3e-19 Score=166.87 Aligned_cols=119 Identities=24% Similarity=0.369 Sum_probs=104.6
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEEC-----CeEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG-----DLKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~-----~~~~kT~v~~~t~nP 555 (726)
..|++.++++|. +..+.|+|+|++|++|++.+ .|.+||||++++. ..+++|+++++|+||
T Consensus 12 ~~G~~~lsL~y~--------------~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 76 (153)
T 3fbk_A 12 VQGAGQLRLSID--------------AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDP 76 (153)
T ss_dssp -CCCCEEEEEEE--------------ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSC
T ss_pred CCCEEEEEEEEE--------------CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCC
Confidence 579999999998 56699999999999999998 6999999999993 357899999999999
Q ss_pred eeeeEEEEecC----CCeEEEEEEECCCCCC-CCeeEEEEEEccccCC-CCceeeEEecCCCCCe
Q 004872 556 QWHQTLEFPDD----GSPLTLHVRDHNALLA-SSSIGDCVVEYQRLPP-NQMADKWIPLQGVRKG 614 (726)
Q Consensus 556 ~wne~~~f~v~----~~~l~i~V~d~d~~~~-d~~lG~~~i~l~~l~~-~~~~~~w~~L~~~~~G 614 (726)
+|||+|.|.+. ...|.|+|||+|.+++ |++||++.++|.++.. +.....||+|.+...|
T Consensus 77 ~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 77 AFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp EEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred ccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 99999999983 4679999999999887 9999999999999974 7788999999875544
No 21
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.79 E-value=8.6e-19 Score=169.46 Aligned_cols=120 Identities=28% Similarity=0.395 Sum_probs=97.7
Q ss_pred CCCceEEEEEEEEeecCcccccCCCCccEEEEEECC------eEEEeEeeeCCCCCeeeeEEEEecC--CCeEEEEEEEC
Q 004872 506 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDH 577 (726)
Q Consensus 506 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~t~nP~wne~~~f~v~--~~~l~i~V~d~ 577 (726)
....|.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++++||+|||+|.|.+. ...|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 356799999999999999999999999999999965 5789999999999999999999985 46899999999
Q ss_pred CCCCCCCeeEEEEEEccccCCCCce------eeEEecCC-----CCCeEEEEEEEEEecC
Q 004872 578 NALLASSSIGDCVVEYQRLPPNQMA------DKWIPLQG-----VRKGEIHVLITRKVPE 626 (726)
Q Consensus 578 d~~~~d~~lG~~~i~l~~l~~~~~~------~~w~~L~~-----~~~G~i~l~l~~~~p~ 626 (726)
+.+++|++||++.|+|..+..+... .+||+|.. ...|+|+++++| .|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~-~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTY-LPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEE-CC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEE-EeC
Confidence 9999999999999999999765433 28999974 246999999999 775
No 22
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.79 E-value=4e-19 Score=164.17 Aligned_cols=113 Identities=25% Similarity=0.425 Sum_probs=100.5
Q ss_pred CceEEEEEEEEeecCcccccCCC-----------CccEEEEEECCeE-EEeEeeeCCCCCeeeeEEEEecC-CCeEEEEE
Q 004872 508 GNGWIELVIVEARDLVAADLRGT-----------SDPYVKVQYGDLK-KRTKVIFKTLNPQWHQTLEFPDD-GSPLTLHV 574 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~-----------~DPyv~v~~~~~~-~kT~v~~~t~nP~wne~~~f~v~-~~~l~i~V 574 (726)
..|.|+|+|++|++|++.|..+. +||||++.+++.+ .+|+++++|+||+|||+|.|.+. ...|.|+|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~L~~~V 83 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCCCEEEEEE
Confidence 45899999999999998885444 9999999998865 69999999999999999999984 58899999
Q ss_pred EECCCCCCCCeeEEEEEEccccCCCC--ceeeEEecCCCCCeEEEEEEEE
Q 004872 575 RDHNALLASSSIGDCVVEYQRLPPNQ--MADKWIPLQGVRKGEIHVLITR 622 (726)
Q Consensus 575 ~d~d~~~~d~~lG~~~i~l~~l~~~~--~~~~w~~L~~~~~G~i~l~l~~ 622 (726)
||+|.+++|++||++.+++.++..+. ..+.|++|+. .|+|+++++|
T Consensus 84 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~ 131 (136)
T 1gmi_A 84 FHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDL 131 (136)
T ss_dssp EECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEE
T ss_pred EeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEE
Confidence 99999999999999999999997643 4589999975 8999999998
No 23
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=1e-18 Score=161.90 Aligned_cols=115 Identities=18% Similarity=0.256 Sum_probs=102.3
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEEC---C-eEEEeEeeeCCCCCe
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG---D-LKKRTKVIFKTLNPQ 556 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~---~-~~~kT~v~~~t~nP~ 556 (726)
..|+|.+++.|. ...+.|+|+|++|+ ++|..|.+||||++++. + .+++|+++++|+||+
T Consensus 11 ~~G~l~~sl~y~--------------~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~ 73 (138)
T 1wfm_A 11 QAPKLHYCLDYD--------------CQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTT 73 (138)
T ss_dssp SCCEEEEEEEEE--------------TTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEE
T ss_pred cceEEEEEEEEe--------------CCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCc
Confidence 369999999988 56799999999999 46788999999999993 2 367999999999999
Q ss_pred eeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC
Q 004872 557 WHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR 612 (726)
Q Consensus 557 wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 612 (726)
|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+...+.|++|....
T Consensus 74 wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 74 WEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 9999999984 4689999999999999999999999999998777889999998643
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.78 E-value=1.2e-18 Score=162.20 Aligned_cols=116 Identities=28% Similarity=0.404 Sum_probs=106.4
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECC-----eEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 555 (726)
..|+|.+++.|. +..+.|+|+|++|++|++.+..|.+||||++++.+ .+++|+++++++||
T Consensus 14 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 79 (142)
T 2chd_A 14 TLGALEFSLLYD--------------QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNP 79 (142)
T ss_dssp CCCEEEEEEEEE--------------GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSC
T ss_pred ccceEEEEEEEe--------------CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCC
Confidence 369999999998 56799999999999999999999999999999965 68899999999999
Q ss_pred eeeeEEEEe-cC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCC
Q 004872 556 QWHQTLEFP-DD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQG 610 (726)
Q Consensus 556 ~wne~~~f~-v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 610 (726)
+|||+|.|. +. ...|.|+|||++.+++|++||++.++|..+..+.....|++|+.
T Consensus 80 ~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 80 VWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred cCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 999999998 54 37899999999999999999999999999998888899999864
No 25
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.4e-18 Score=161.85 Aligned_cols=116 Identities=26% Similarity=0.417 Sum_probs=103.7
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECC-----eEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 555 (726)
..|+|.++++|. +..+.|+|+|++|++|++.+..| +||||++++.+ .+++|+++++|+||
T Consensus 9 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 73 (142)
T 2dmg_A 9 PLGQIQLTIRHS--------------SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNP 73 (142)
T ss_dssp SSCEEEEEEEEE--------------TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSC
T ss_pred CcceEEEEEEEe--------------CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCC
Confidence 369999999998 56799999999999999999999 99999999932 57899999999999
Q ss_pred eeeeEEEEecC-----CCeEEEEEEECCCCCC--CCeeEEEEEEccccCCCCceeeEEecCCC
Q 004872 556 QWHQTLEFPDD-----GSPLTLHVRDHNALLA--SSSIGDCVVEYQRLPPNQMADKWIPLQGV 611 (726)
Q Consensus 556 ~wne~~~f~v~-----~~~l~i~V~d~d~~~~--d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 611 (726)
+|||+|.|.+. ...|.|+|||+|.++. |++||++.++|..+..+.....|++|.+.
T Consensus 74 ~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 74 VFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp EEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 99999999985 3589999999998763 57999999999999877788999999764
No 26
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=3.3e-19 Score=166.01 Aligned_cols=116 Identities=33% Similarity=0.514 Sum_probs=104.4
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECCe--------------EEEe
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDL--------------KKRT 546 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~--------------~~kT 546 (726)
..|+|.+++.|. .+.|+|+|++|++|++++..|.+||||++++++. +++|
T Consensus 5 ~~G~i~~~l~y~----------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT 68 (142)
T 1rh8_A 5 ITGEIQLQINYD----------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRT 68 (142)
T ss_dssp CCCEEEEEEEEE----------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTT
T ss_pred cceEEEEEEEEc----------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeec
Confidence 479999999986 3899999999999999999999999999999763 4789
Q ss_pred EeeeCCCCCeeeeEEEEe-c-----CCCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC
Q 004872 547 KVIFKTLNPQWHQTLEFP-D-----DGSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR 612 (726)
Q Consensus 547 ~v~~~t~nP~wne~~~f~-v-----~~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~ 612 (726)
+++++|+||+|||+|.|. + ....|.|+|||+|.+++|++||++.++|.++..+.....||+|.+..
T Consensus 69 ~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 69 KYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp TTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred cccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 999999999999999997 5 35799999999999999999999999999998777788999998643
No 27
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.78 E-value=4.9e-19 Score=166.30 Aligned_cols=118 Identities=28% Similarity=0.478 Sum_probs=104.7
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEEC-----CeEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG-----DLKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~-----~~~~kT~v~~~t~nP 555 (726)
..|+|.++++|. .+.|+|+|++|++|+..+..|.+||||++++. ..+++|+++++++||
T Consensus 18 ~~G~l~~~l~~~----------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 81 (149)
T 1a25_A 18 RRGRIYIQAHID----------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNP 81 (149)
T ss_dssp TTCEEEEEEEES----------------SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSC
T ss_pred cceEEEEEEEec----------------CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCC
Confidence 469999999863 37899999999999999999999999999996 368899999999999
Q ss_pred eeeeEEEEecC----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCCCeE
Q 004872 556 QWHQTLEFPDD----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGE 615 (726)
Q Consensus 556 ~wne~~~f~v~----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~ 615 (726)
+|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+ ..+.||+|.+...|+
T Consensus 82 ~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~ 144 (149)
T 1a25_A 82 EWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGE 144 (149)
T ss_dssp EEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHT
T ss_pred cCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCc
Confidence 99999999985 358999999999999999999999999999766 578999998755554
No 28
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.78 E-value=7.3e-19 Score=162.54 Aligned_cols=117 Identities=28% Similarity=0.506 Sum_probs=104.2
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE-----CCeEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP 555 (726)
..|+|.++++|. .+.|+|+|++|++|+..+..|.+||||++++ +..+++|+++++++||
T Consensus 3 ~~G~l~~~l~~~----------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 66 (137)
T 3rdl_A 3 KRGRIYLKAEVT----------------DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNP 66 (137)
T ss_dssp CCCEEEEEEEEE----------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSC
T ss_pred cceEEEEEEEEc----------------CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCC
Confidence 469999999983 3899999999999999999999999999999 4568999999999999
Q ss_pred eeeeEEEEecC----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCCCe
Q 004872 556 QWHQTLEFPDD----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKG 614 (726)
Q Consensus 556 ~wne~~~f~v~----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G 614 (726)
.|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+. ...|++|.+...|
T Consensus 67 ~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g 128 (137)
T 3rdl_A 67 QWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEG 128 (137)
T ss_dssp EEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHH
T ss_pred CcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCcccc
Confidence 99999999984 3579999999999999999999999999996654 8899999864444
No 29
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=162.58 Aligned_cols=117 Identities=24% Similarity=0.278 Sum_probs=104.0
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCccc-cc------CCCCccEEEEEEC---CeEEEeEeee
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAA-DL------RGTSDPYVKVQYG---DLKKRTKVIF 550 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~-d~------~g~~DPyv~v~~~---~~~~kT~v~~ 550 (726)
..|+|.++++|. +..+.|+|+|++|++|+.. +. .|.+||||++++. ..+++|++++
T Consensus 11 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~ 76 (147)
T 2enp_A 11 QLGMLHFSTQYD--------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKR 76 (147)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCC
T ss_pred cceEEEEEEEEc--------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeeccc
Confidence 469999999998 6679999999999999984 43 3589999999995 3578999999
Q ss_pred CCCCCeeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCC
Q 004872 551 KTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 611 (726)
Q Consensus 551 ~t~nP~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 611 (726)
+++||+|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++........|++|.+.
T Consensus 77 ~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 77 KTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp SCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred CCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999999999985 368999999999999999999999999999877777899999864
No 30
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.77 E-value=4e-18 Score=161.90 Aligned_cols=117 Identities=28% Similarity=0.479 Sum_probs=103.7
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECC-----eEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 555 (726)
..|+|.+++.|. +..+.|+|+|++|+||+..+..|.+||||++++.+ .+++|+++++|+||
T Consensus 10 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 75 (159)
T 1tjx_A 10 KLGDICFSLRYV--------------PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNP 75 (159)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSC
T ss_pred cCCeEEEEEEEc--------------CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCC
Confidence 469999999998 66799999999999999999999999999999952 46799999999999
Q ss_pred eeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEcccc------------CCCCceeeEEecCCC
Q 004872 556 QWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRL------------PPNQMADKWIPLQGV 611 (726)
Q Consensus 556 ~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l------------~~~~~~~~w~~L~~~ 611 (726)
+|||+|.|.+. ...|.|+|||+|.+++|++||++.+++..+ .++....+||+|.+.
T Consensus 76 ~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 76 YYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp EEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred cccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 99999999985 357999999999999999999999999853 345678899999764
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.77 E-value=2.4e-18 Score=159.25 Aligned_cols=114 Identities=32% Similarity=0.485 Sum_probs=100.4
Q ss_pred cceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECC-----eEEEeEeeeCCCCCe
Q 004872 482 TGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNPQ 556 (726)
Q Consensus 482 ~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP~ 556 (726)
.|+|.++++|. +..+.|+|+|++|++|+..+..|.+||||++++.+ .+++|+++++++||+
T Consensus 2 ~G~l~~sl~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~ 67 (138)
T 3n5a_A 2 RGELLLSLCYN--------------PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPI 67 (138)
T ss_dssp CCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCE
T ss_pred CcEEEEEEEEc--------------CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCc
Confidence 69999999998 66799999999999999999999999999999953 478999999999999
Q ss_pred eeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccC------------CCCceeeEEecC
Q 004872 557 WHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLP------------PNQMADKWIPLQ 609 (726)
Q Consensus 557 wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~------------~~~~~~~w~~L~ 609 (726)
|||+|.|.+. ...|.|+|||+|.+++|++||++.+++..+. ++....+|++|.
T Consensus 68 wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 137 (138)
T 3n5a_A 68 FNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLK 137 (138)
T ss_dssp EEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred CcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecC
Confidence 9999999985 2579999999999999999999999998642 445667777764
No 32
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.77 E-value=4.2e-18 Score=157.74 Aligned_cols=117 Identities=24% Similarity=0.272 Sum_probs=103.1
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccC-CCCccEEEEEECC---eEEEeEeeeCCCCCe
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLR-GTSDPYVKVQYGD---LKKRTKVIFKTLNPQ 556 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~-g~~DPyv~v~~~~---~~~kT~v~~~t~nP~ 556 (726)
..|+|.++++|. +..+.|+|+|++|++|++.+.. |.+||||++++.+ .+++|+++++|+||+
T Consensus 7 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~ 72 (138)
T 1ugk_A 7 GLGTLFFSLEYN--------------FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA 72 (138)
T ss_dssp CCCEEEEEEEEE--------------GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCE
T ss_pred ccEEEEEEEEEE--------------CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCc
Confidence 369999999998 5679999999999999999985 8999999999953 689999999999999
Q ss_pred eeeEEEEe-cC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCC-ceeeEEecCCC
Q 004872 557 WHQTLEFP-DD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQ-MADKWIPLQGV 611 (726)
Q Consensus 557 wne~~~f~-v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~-~~~~w~~L~~~ 611 (726)
|||+|.|. +. ...|.|+|||+|.+++|++||++.++|.++..+. ....|++|...
T Consensus 73 wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 73 FDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred EeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 99999995 53 3689999999999999999999999999997654 34567999754
No 33
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.77 E-value=2.5e-18 Score=157.97 Aligned_cols=115 Identities=19% Similarity=0.298 Sum_probs=99.5
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECC--eEEEeEeeeCCCCCeeeeEEEEecC-CCeEEEEEEECCCCCC--
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD--LKKRTKVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNALLA-- 582 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~--~~~kT~v~~~t~nP~wne~~~f~v~-~~~l~i~V~d~d~~~~-- 582 (726)
....|+|+|++|++|++.|..|.+||||++++++ ++++|+++++|+||+|||+|.|.+. ...|.|+|||+|.+++
T Consensus 3 ~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQ 82 (132)
T ss_dssp SEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTTSST
T ss_pred CeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCCCCC
Confidence 4578999999999999999999999999999975 7899999999999999999999984 4569999999999876
Q ss_pred -CCeeEEEEEEcccc-CCCCceeeEEecCCC-------CCeEEEEEEEE
Q 004872 583 -SSSIGDCVVEYQRL-PPNQMADKWIPLQGV-------RKGEIHVLITR 622 (726)
Q Consensus 583 -d~~lG~~~i~l~~l-~~~~~~~~w~~L~~~-------~~G~i~l~l~~ 622 (726)
|++||++.+++..+ .......+|++|... ..|+|+++++.
T Consensus 83 ~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999999988 333344589999643 36999999975
No 34
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.76 E-value=6.7e-18 Score=161.55 Aligned_cols=116 Identities=24% Similarity=0.407 Sum_probs=102.0
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEECC-----eEEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 555 (726)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||
T Consensus 22 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP 87 (166)
T 2cm5_A 22 ERGKILVSLMYS--------------TQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNP 87 (166)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSC
T ss_pred ccceEEEEEEEE--------------CCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCC
Confidence 469999999998 56799999999999999999999999999999965 58899999999999
Q ss_pred eeeeEEEEecC-----CCeEEEEEEECCCCCCCCeeEEEEEEccccC------------CCCceeeEEecCC
Q 004872 556 QWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLP------------PNQMADKWIPLQG 610 (726)
Q Consensus 556 ~wne~~~f~v~-----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~------------~~~~~~~w~~L~~ 610 (726)
+|||+|.|.+. ...|.|+|||+|.+++|++||++.+++..+. .+....+|+.|.+
T Consensus 88 ~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 88 EFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQN 159 (166)
T ss_dssp EEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC
T ss_pred cccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCC
Confidence 99999999984 4589999999999999999999999998752 3445666776654
No 35
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.76 E-value=2.8e-18 Score=164.94 Aligned_cols=116 Identities=28% Similarity=0.430 Sum_probs=102.8
Q ss_pred cccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCccccc-CCCCccEEEEEECC-----eEEEeEeeeCCC
Q 004872 480 VNTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADL-RGTSDPYVKVQYGD-----LKKRTKVIFKTL 553 (726)
Q Consensus 480 ~~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~-~g~~DPyv~v~~~~-----~~~kT~v~~~t~ 553 (726)
...|+|.+++.|. .+.|.|+|++|++|+++|. .|.+||||++++.+ .+++|+++++|+
T Consensus 16 ~~~G~l~~~l~y~----------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~ 79 (171)
T 2q3x_A 16 PAMGDIQIGMEDK----------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTL 79 (171)
T ss_dssp -CCCEEEEEEEEE----------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCS
T ss_pred CCccEEEEEEEEC----------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCC
Confidence 3469999999983 3899999999999999985 79999999999953 378999999999
Q ss_pred CCeeeeEEEEecC--CCeEEEEEE-ECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCC
Q 004872 554 NPQWHQTLEFPDD--GSPLTLHVR-DHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 611 (726)
Q Consensus 554 nP~wne~~~f~v~--~~~l~i~V~-d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~ 611 (726)
||+|||+|.|.+. ...|.|+|| |+|.+++|++||++.++|.++..+...+.||+|.+.
T Consensus 80 nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 80 DPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp SCEEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999984 578999999 999999999999999999999888889999999864
No 36
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=3.8e-18 Score=163.95 Aligned_cols=116 Identities=18% Similarity=0.249 Sum_probs=99.4
Q ss_pred CCceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeeeCCCCCeeeeEEEEecC-CCeEEEEEEECCCCCCCCe
Q 004872 507 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNALLASSS 585 (726)
Q Consensus 507 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~~~f~v~-~~~l~i~V~d~d~~~~d~~ 585 (726)
...+.|+|+|++|++|++.+..+.+||||+|++++++++|+++++|+||+|||+|.|.+. ...|.|+|||+|.+++|++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECTTCEEEEEEEECCSSSCCEE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCCCCEEEEEEEECCCCCCCce
Confidence 457899999999999994444455999999999999999999999999999999999985 6789999999999999999
Q ss_pred eEEEEEEccccCCC-----CceeeEEecCCC-----CCeEEEEEEEE
Q 004872 586 IGDCVVEYQRLPPN-----QMADKWIPLQGV-----RKGEIHVLITR 622 (726)
Q Consensus 586 lG~~~i~l~~l~~~-----~~~~~w~~L~~~-----~~G~i~l~l~~ 622 (726)
||++.++|.++..+ .....|++|... ..|+|.+++++
T Consensus 113 lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence 99999999988532 123679999643 36999999998
No 37
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.75 E-value=1e-17 Score=157.47 Aligned_cols=111 Identities=22% Similarity=0.355 Sum_probs=98.0
Q ss_pred cEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCe-Eeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEe
Q 004872 379 RKINVTVVEGKDLMPKDK----------SGKCDPYVKLQYGKI-VQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYN 446 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~----------~g~~dpyv~v~lg~~-~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d 446 (726)
|.|.|+|++|++|+.+|. .|.+||||++.++++ .+||+++ ++.||.|||+|.|.+.+ ...|.|+|||
T Consensus 29 g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~V~D 107 (157)
T 2fk9_A 29 GYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELAVFH 107 (157)
T ss_dssp EEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEEE
T ss_pred cEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEEEEE
Confidence 589999999999998873 367999999999765 4799999 99999999999999764 4689999999
Q ss_pred ecCC-CCcceEEEEEEccccccC----CeeeeeeeccccccceeEEEEEEE
Q 004872 447 EEIF-GDENMGSARVNLEGLVEG----SVRDIWVPLEKVNTGELRLQIEAT 492 (726)
Q Consensus 447 ~~~~-~d~~iG~~~i~L~~l~~~----~~~~~w~~L~~~~~G~I~l~~~~~ 492 (726)
++.. +|++||.+.+++.++..+ ...+.||+|.+ .|+|+++++|.
T Consensus 108 ~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 108 ETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp CCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred CCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 9988 799999999999999865 57889999985 79999999874
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.75 E-value=1.3e-17 Score=157.29 Aligned_cols=101 Identities=29% Similarity=0.342 Sum_probs=86.0
Q ss_pred ccceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE--CCe---EEEeEeeeCCCCC
Q 004872 481 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL---KKRTKVIFKTLNP 555 (726)
Q Consensus 481 ~~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~---~~kT~v~~~t~nP 555 (726)
..|+|.++++|. +..+.|.|+|++|++|+..+..|.+||||++++ ++. +++|+++++|+||
T Consensus 15 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 80 (153)
T 1w15_A 15 GRGELLVSLCYQ--------------STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNA 80 (153)
T ss_dssp -CCEEEEEEEEE--------------TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSE
T ss_pred cccEEEEEEEEc--------------CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCC
Confidence 469999999998 567999999999999999999999999999999 433 6799999999999
Q ss_pred eeeeEEEEecCC-----CeEEEEEEECCCCCCCCeeEEEEEEccc
Q 004872 556 QWHQTLEFPDDG-----SPLTLHVRDHNALLASSSIGDCVVEYQR 595 (726)
Q Consensus 556 ~wne~~~f~v~~-----~~l~i~V~d~d~~~~d~~lG~~~i~l~~ 595 (726)
+|||+|.|.+.. ..|.|+|||+|.+++|++||++.+++..
T Consensus 81 ~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 81 VFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred eecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 999999999852 5799999999999999999999999987
No 39
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=1.9e-17 Score=150.69 Aligned_cols=113 Identities=24% Similarity=0.357 Sum_probs=101.0
Q ss_pred cEEEEEEEEeecCCCC---CCCCCCCcEEEEEEC---CeEeecccc-CCCCCceeeEEEEEeeC-CceeEEEEEEeecCC
Q 004872 379 RKINVTVVEGKDLMPK---DKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIG-GGECLMVKCYNEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~---d~~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~wne~f~f~v~~-~~~~l~i~V~d~~~~ 450 (726)
+.|.|+|++|++|+.+ +..|.+||||+++++ ...+||+++ ++.||.|||.|.|.+.. ....|.|+|||++..
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 4899999999999984 556899999999996 478999999 99999999999999854 467899999999987
Q ss_pred CCcceEEEEEEccccccCCeeeeeeeccccccceeEEEEEE
Q 004872 451 GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQIEA 491 (726)
Q Consensus 451 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I~l~~~~ 491 (726)
++++||++.++|.++..+.....|++|.+.+.|+|+++++.
T Consensus 83 ~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 83 MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEEC
T ss_pred CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEe
Confidence 88999999999999988888899999998778888888764
No 40
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=4.5e-17 Score=151.07 Aligned_cols=115 Identities=23% Similarity=0.285 Sum_probs=103.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCceeeEEEEEeeC----CceeEEEEEEeecCC-CC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEIF-GD 452 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~wne~f~f~v~~----~~~~l~i~V~d~~~~-~d 452 (726)
+.|.|+|++|++|+.++. |.+||||+++++++.+||+++ ++.||+|||.|.|.+.. ....|.|+|||++.. ++
T Consensus 7 g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~ 85 (140)
T 2dmh_A 7 GMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQN 85 (140)
T ss_dssp CEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSC
T ss_pred cEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCC
Confidence 589999999999999988 999999999998889999999 99999999999999864 367899999999988 88
Q ss_pred cceEEEEEEccccccCCeeeeeee---cccc----ccceeEEEEEEEEe
Q 004872 453 ENMGSARVNLEGLVEGSVRDIWVP---LEKV----NTGELRLQIEATRV 494 (726)
Q Consensus 453 ~~iG~~~i~L~~l~~~~~~~~w~~---L~~~----~~G~I~l~~~~~~~ 494 (726)
++||++.+++.++..+.....|++ |.+. ..|+|++++.|.+.
T Consensus 86 ~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 86 KLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp CCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred ceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 999999999999988887788988 6543 24999999999863
No 41
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.73 E-value=3e-17 Score=151.47 Aligned_cols=119 Identities=24% Similarity=0.358 Sum_probs=105.6
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc--CCCCCceeeEEEEEeeCCceeEEEEEEeecCC-CCcc
Q 004872 378 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDEN 454 (726)
Q Consensus 378 ~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~--~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~-~d~~ 454 (726)
.+.|.|+|++|++|+.++..|.+||||+++++.+.++|+++ ++.||.|||+|.|.+.+....|.|+|||++.. +|++
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~ 88 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDA 88 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCC
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCCce
Confidence 35899999999999999988999999999998888999998 69999999999999888788999999999988 7999
Q ss_pred eEEEEEEccccc-cCCeeeeeeeccc--cccceeEEEEEEEEecC
Q 004872 455 MGSARVNLEGLV-EGSVRDIWVPLEK--VNTGELRLQIEATRVDD 496 (726)
Q Consensus 455 iG~~~i~L~~l~-~~~~~~~w~~L~~--~~~G~I~l~~~~~~~~~ 496 (726)
||++.++|.++. .+.....||+|.. ...|+|+++++|.+...
T Consensus 89 lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 89 VGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp SEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECCS
T ss_pred EEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCCC
Confidence 999999999995 4445679999963 34699999999997654
No 42
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.73 E-value=7.6e-17 Score=151.08 Aligned_cols=112 Identities=33% Similarity=0.584 Sum_probs=101.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCC-------
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF------- 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~------- 450 (726)
+.|.|+|++|++|+.++..|.+||||+++++++.++|+++ ++.||.|||.|.|.+......|.|+|||++..
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~ 96 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVKQ 96 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHHT
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccccc
Confidence 5899999999999999999999999999999999999999 99999999999999888778999999999973
Q ss_pred -----CCcceEEEEEEccccccCCeeeeeeecccc-----ccceeEEEEEEE
Q 004872 451 -----GDENMGSARVNLEGLVEGSVRDIWVPLEKV-----NTGELRLQIEAT 492 (726)
Q Consensus 451 -----~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~I~l~~~~~ 492 (726)
++++||++.++|.++ ......||+|... ..|+|+++++|.
T Consensus 97 ~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 97 RFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp TTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 799999999999999 3456799999853 359999999875
No 43
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.72 E-value=3.4e-17 Score=150.56 Aligned_cols=112 Identities=24% Similarity=0.361 Sum_probs=102.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCC-CCcceE
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENMG 456 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~-~d~~iG 456 (726)
+.|.|+|++|++|+.++..|.+||||+++++++.++|+++ ++.||.|||+|.|.+.+....|.|+|||++.. ++++||
T Consensus 13 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG 92 (133)
T 2ep6_A 13 GILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLG 92 (133)
T ss_dssp EEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECC
T ss_pred eEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCCeeE
Confidence 5899999999999999989999999999999999999999 99999999999999887778899999999988 799999
Q ss_pred EEEEEccccccCCeeeeeeecccc-----ccceeEEEEEEE
Q 004872 457 SARVNLEGLVEGSVRDIWVPLEKV-----NTGELRLQIEAT 492 (726)
Q Consensus 457 ~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~I~l~~~~~ 492 (726)
++.+++.++..+. ..||+|... ..|+|+++++|.
T Consensus 93 ~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 93 KVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp BCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEE
Confidence 9999999997543 589999753 469999999886
No 44
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.72 E-value=5.8e-17 Score=152.79 Aligned_cols=117 Identities=26% Similarity=0.338 Sum_probs=96.2
Q ss_pred CccEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecC
Q 004872 377 TGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEI 449 (726)
Q Consensus 377 ~~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~------~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~ 449 (726)
..+.|.|+|++|++|+.++..|.+||||+++++. ..++|+++ ++.||.|||+|.|.+......|.|+|||++.
T Consensus 18 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~ 97 (153)
T 3b7y_A 18 NSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENR 97 (153)
T ss_dssp TCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCS
T ss_pred CccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCC
Confidence 3458999999999999999889999999999942 68999999 9999999999999988777899999999998
Q ss_pred C-CCcceEEEEEEccccccCCee------eeeeecccc-----ccceeEEEEEEEE
Q 004872 450 F-GDENMGSARVNLEGLVEGSVR------DIWVPLEKV-----NTGELRLQIEATR 493 (726)
Q Consensus 450 ~-~d~~iG~~~i~L~~l~~~~~~------~~w~~L~~~-----~~G~I~l~~~~~~ 493 (726)
. ++++||++.++|.++..+... ..||+|... ..|+|+++++|.|
T Consensus 98 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 98 LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 8 799999999999999765532 589999753 3699999999863
No 45
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.70 E-value=9e-17 Score=148.32 Aligned_cols=112 Identities=20% Similarity=0.411 Sum_probs=97.8
Q ss_pred cEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCe-Eeecccc-CCCCCceeeEEEEEeeCCceeEEEEEE
Q 004872 379 RKINVTVVEGKDLMPKDKSGK-----------CDPYVKLQYGKI-VQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCY 445 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~-----------~dpyv~v~lg~~-~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~ 445 (726)
|.|.|+|++|++|+.+|..+. +||||++++++. ..+|+++ ++.||.|||.|.|.+... ..|.|+||
T Consensus 6 g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V~ 84 (136)
T 1gmi_A 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAVF 84 (136)
T ss_dssp EEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEEE
T ss_pred eEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEEE
Confidence 589999999999998775443 999999999665 4799999 999999999999997665 78999999
Q ss_pred eecCC-CCcceEEEEEEccccccCC--eeeeeeeccccccceeEEEEEEEE
Q 004872 446 NEEIF-GDENMGSARVNLEGLVEGS--VRDIWVPLEKVNTGELRLQIEATR 493 (726)
Q Consensus 446 d~~~~-~d~~iG~~~i~L~~l~~~~--~~~~w~~L~~~~~G~I~l~~~~~~ 493 (726)
|++.. +|++||++.+++.++..+. ..+.|++|.+ .|+|+++++|..
T Consensus 85 d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~ 133 (136)
T 1gmi_A 85 HDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSG 133 (136)
T ss_dssp ECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEE
T ss_pred eCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEe
Confidence 99987 7999999999999998653 4589999985 799999999874
No 46
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.69 E-value=2.2e-16 Score=152.47 Aligned_cols=116 Identities=26% Similarity=0.367 Sum_probs=96.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCC-
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF- 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~------~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~- 450 (726)
+.|.|+|++|++|+.++..|.+||||+++++. ..++|+++ ++.||.|||.|.|.+......|.|+|||++..
T Consensus 8 g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~~~ 87 (176)
T 3m7f_B 8 RVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENRLT 87 (176)
T ss_dssp EEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC---
T ss_pred EEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCCCC
Confidence 58999999999999999899999999999953 68999999 99999999999999887778899999999988
Q ss_pred CCcceEEEEEEccccccCCee-e-----eeeecccc-----ccceeEEEEEEEEe
Q 004872 451 GDENMGSARVNLEGLVEGSVR-D-----IWVPLEKV-----NTGELRLQIEATRV 494 (726)
Q Consensus 451 ~d~~iG~~~i~L~~l~~~~~~-~-----~w~~L~~~-----~~G~I~l~~~~~~~ 494 (726)
++++||++.++|.++...... . .||+|... ..|+|++++.|.+.
T Consensus 88 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 88 RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 899999999999999866433 1 79999863 26999999999976
No 47
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-15 Score=141.62 Aligned_cols=103 Identities=21% Similarity=0.419 Sum_probs=92.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCceeeEEEEEeeC----CceeEEEEEEeecCC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~wne~f~f~v~~----~~~~l~i~V~d~~~~ 450 (726)
+.|.|+|++|++|+.++..|.+||||++++ +...+||+++ ++.||.|||.|.|.+.. ....|.|+|||++..
T Consensus 26 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~ 105 (141)
T 2d8k_A 26 STLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRF 105 (141)
T ss_dssp CCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSS
T ss_pred CEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCC
Confidence 379999999999999998999999999999 3568999999 99999999999998533 257899999999988
Q ss_pred -CCcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 451 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 451 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
++++||++.++|.++..+.....||+|.+..
T Consensus 106 ~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 106 SRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 8999999999999998887788999998754
No 48
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.66 E-value=7.8e-16 Score=141.58 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=90.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCceeeEEEEE-eeC---CceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELD-EIG---GGECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~wne~f~f~-v~~---~~~~l~i~V~d~~ 448 (726)
+.|.|+|++|++|+. +.+|.+||||++++ +...+||+++ ++.||.|||+|.|. +.. ....|.|+|||++
T Consensus 20 ~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 489999999999997 77899999999999 3568999999 99999999999999 553 3578999999999
Q ss_pred CC-CCcceEEEEEEccccccCCeeeeeeecccccc
Q 004872 449 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVNT 482 (726)
Q Consensus 449 ~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~ 482 (726)
.. ++++||++.++|.++..+.....||+|.+.+.
T Consensus 99 ~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 99 SLRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp SSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred CCCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 88 78999999999999988778889999987654
No 49
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.66 E-value=6.6e-16 Score=142.53 Aligned_cols=106 Identities=30% Similarity=0.484 Sum_probs=94.4
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCceeeEEEEEeeCC--ceeEEEEEEeecCC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~wne~f~f~v~~~--~~~l~i~V~d~~~~ 450 (726)
+.|.|+|++|++|+.++..|.+||||++++ +...++|+++ ++.||.|||.|.|.+... ...|.|+|||++..
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCC
Confidence 389999999999999999999999999999 4678999999 999999999999997653 45899999999988
Q ss_pred -CCcceEEEEEEccccccCCeeeeeeecccccccee
Q 004872 451 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGEL 485 (726)
Q Consensus 451 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I 485 (726)
++++||++.++|.++..+. ...||+|.+...|+.
T Consensus 96 ~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~~ 130 (137)
T 3rdl_A 96 TRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGEY 130 (137)
T ss_dssp SCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHTT
T ss_pred CCCceEEEEEEeHHHhccCc-cCceEECcCcccccc
Confidence 8999999999999997765 789999998766653
No 50
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.65 E-value=1.1e-15 Score=140.17 Aligned_cols=111 Identities=21% Similarity=0.292 Sum_probs=95.2
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEEC--CeEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCC-C---C
Q 004872 380 KINVTVVEGKDLMPKDKSGKCDPYVKLQYG--KIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-G---D 452 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~-~---d 452 (726)
.|.|+|++|++|..+|..|.+||||+++++ .+.++|+++ ++.||.|||.|.|.+.... .|.|+|||++.. + |
T Consensus 6 ~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~d 84 (132)
T 3pyc_A 6 KIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQGA 84 (132)
T ss_dssp EEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSSTTT
T ss_pred EEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCCCC
Confidence 799999999999999999999999999995 479999999 9999999999999987654 499999999987 3 7
Q ss_pred cceEEEEEEccccc-cCCeeeeeeecccc-------ccceeEEEEEE
Q 004872 453 ENMGSARVNLEGLV-EGSVRDIWVPLEKV-------NTGELRLQIEA 491 (726)
Q Consensus 453 ~~iG~~~i~L~~l~-~~~~~~~w~~L~~~-------~~G~I~l~~~~ 491 (726)
++||++.+++.++. .......|++|... ..|+|.+++++
T Consensus 85 ~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 85 GFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 99999999999884 33344588888754 26889888864
No 51
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.65 E-value=7.2e-16 Score=143.05 Aligned_cols=105 Identities=24% Similarity=0.443 Sum_probs=92.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCceeeEEEEEeeC----CceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~wne~f~f~v~~----~~~~l~i~V~d~~ 448 (726)
+.|.|+|++|++|+.++..+.+||||++++ +...+||+++ ++.||+|||+|.|.+.. ....|.|+|||++
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 389999999999999999999999999999 4578999999 99999999999998533 2478999999999
Q ss_pred CC-C--CcceEEEEEEccccccCCeeeeeeeccccccce
Q 004872 449 IF-G--DENMGSARVNLEGLVEGSVRDIWVPLEKVNTGE 484 (726)
Q Consensus 449 ~~-~--d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 484 (726)
.. + +++||++.++|.++.... ...||+|.+...|.
T Consensus 101 ~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 101 RVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSGP 138 (141)
T ss_dssp SSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSCC
T ss_pred CCcCCCCceEEEEEEEccccCCCC-CCceEECcccccCC
Confidence 88 4 899999999999987654 78999999866553
No 52
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.65 E-value=9.6e-16 Score=144.41 Aligned_cols=104 Identities=24% Similarity=0.411 Sum_probs=90.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCceeeEEEEEeeC--CceeEEEEEEeecCC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG--GGECLMVKCYNEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~wne~f~f~v~~--~~~~l~i~V~d~~~~ 450 (726)
+.|.|+|++|++|+.++ .|.+||||++++ ....++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 27 ~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~ 105 (153)
T 3fbk_A 27 RVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ 105 (153)
T ss_dssp SEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCC
Confidence 48999999999999988 699999999999 2458999999 99999999999999743 345699999999987
Q ss_pred -C-CcceEEEEEEcccccc-CCeeeeeeeccccccc
Q 004872 451 -G-DENMGSARVNLEGLVE-GSVRDIWVPLEKVNTG 483 (726)
Q Consensus 451 -~-d~~iG~~~i~L~~l~~-~~~~~~w~~L~~~~~G 483 (726)
+ |++||++.++|.++.. +.....||+|.+...|
T Consensus 106 ~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 106 SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp GGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 5 8999999999999985 5677899999986554
No 53
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=1.4e-15 Score=143.12 Aligned_cols=102 Identities=25% Similarity=0.455 Sum_probs=92.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCceeeEEEEEeeC---CceeEEEEEEeecCC-
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIG---GGECLMVKCYNEEIF- 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~wne~f~f~v~~---~~~~l~i~V~d~~~~- 450 (726)
+.|.|+|++|++|+.++..+.+||||++++ ++..+||+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 42 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 121 (152)
T 1rsy_A 42 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS 121 (152)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC
Confidence 389999999999999998999999999999 4568999999 99999999999998754 257899999999988
Q ss_pred CCcceEEEEEEccccccCCeeeeeeecccc
Q 004872 451 GDENMGSARVNLEGLVEGSVRDIWVPLEKV 480 (726)
Q Consensus 451 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~ 480 (726)
++++||++.++|.++..+.....||+|.+.
T Consensus 122 ~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 122 KHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp CCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 799999999999999877778899999763
No 54
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.65 E-value=7.2e-16 Score=148.00 Aligned_cols=117 Identities=15% Similarity=0.249 Sum_probs=98.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCC-CCcceE
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENMG 456 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~-~d~~iG 456 (726)
+.|.|+|++|++|+..+..+.+||||+++++++.+||+++ ++.||+|||.|.|.+. ....|.|+|||++.. +|++||
T Consensus 36 ~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG 114 (173)
T 2nq3_A 36 SQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLLG 114 (173)
T ss_dssp EEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEEE
T ss_pred eEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCceEE
Confidence 4899999999999944444559999999998899999999 9999999999999874 578899999999988 889999
Q ss_pred EEEEEccccccCC-----eeeeeeecccc-----ccceeEEEEEEEEecC
Q 004872 457 SARVNLEGLVEGS-----VRDIWVPLEKV-----NTGELRLQIEATRVDD 496 (726)
Q Consensus 457 ~~~i~L~~l~~~~-----~~~~w~~L~~~-----~~G~I~l~~~~~~~~~ 496 (726)
++.++|.++..+. ....|++|... ..|+|.+++++.+++.
T Consensus 115 ~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 115 TAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLES 164 (173)
T ss_dssp EEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC-
T ss_pred EEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecch
Confidence 9999999987432 12679999764 3699999999997753
No 55
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.64 E-value=1.1e-15 Score=142.11 Aligned_cols=101 Identities=25% Similarity=0.438 Sum_probs=91.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~- 450 (726)
+.|.|+|++|++|+.++..+.+||||++++ +...++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 34 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 113 (143)
T 3f04_A 34 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS 113 (143)
T ss_dssp TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC
Confidence 489999999999999988899999999999 5668999999 999999999999997543 47899999999988
Q ss_pred CCcceEEEEEEccccccCCeeeeeeeccc
Q 004872 451 GDENMGSARVNLEGLVEGSVRDIWVPLEK 479 (726)
Q Consensus 451 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~ 479 (726)
++++||++.++|.++..+.....||+|.+
T Consensus 114 ~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 114 KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 89999999999999988878889999975
No 56
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=1.5e-15 Score=138.60 Aligned_cols=99 Identities=24% Similarity=0.443 Sum_probs=85.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCceeeEEEEEeeC----CceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~wne~f~f~v~~----~~~~l~i~V~d~~ 448 (726)
+.|.|+|++|++|+.++..|.+||||++++ +...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d 97 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 97 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECC
Confidence 489999999999999999999999999999 4578999999 99999999999999533 2578999999999
Q ss_pred CC-C--CcceEEEEEEccccccCCeeeeeeecc
Q 004872 449 IF-G--DENMGSARVNLEGLVEGSVRDIWVPLE 478 (726)
Q Consensus 449 ~~-~--d~~iG~~~i~L~~l~~~~~~~~w~~L~ 478 (726)
.. + +++||++.++|.++.... ...||+|+
T Consensus 98 ~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 98 RVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 88 4 899999999999987655 78999984
No 57
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.64 E-value=6.3e-16 Score=174.98 Aligned_cols=118 Identities=25% Similarity=0.419 Sum_probs=106.4
Q ss_pred CCCceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeeeCCCCCeeeeEEEEecC---CCeEEEEEEECCCCCC
Q 004872 506 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD---GSPLTLHVRDHNALLA 582 (726)
Q Consensus 506 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~~~f~v~---~~~l~i~V~d~d~~~~ 582 (726)
....|.|+|+|++|++|++.|..|.+||||++++++.+++|+++++|+||+|||+|.|.+. ...|.|+|||+|.+++
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 3567899999999999999999999999999999999999999999999999999999984 4679999999999999
Q ss_pred CCeeEEEEEEccccCCCC----ceeeEEecCCCCCeEEEEEEEEE
Q 004872 583 SSSIGDCVVEYQRLPPNQ----MADKWIPLQGVRKGEIHVLITRK 623 (726)
Q Consensus 583 d~~lG~~~i~l~~l~~~~----~~~~w~~L~~~~~G~i~l~l~~~ 623 (726)
|++||++.+++.++..+. +...|++|.+...|+|+++++++
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 999999999999986543 37799999999999999999884
No 58
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.63 E-value=2e-15 Score=138.07 Aligned_cols=95 Identities=17% Similarity=0.296 Sum_probs=76.8
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeee-CCCCCeeeeEEEEecC--CCeEEEEEEECCCCCCCC
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD--GSPLTLHVRDHNALLASS 584 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~~~f~v~--~~~l~i~V~d~d~~~~d~ 584 (726)
..+.|.|+|.+|++|+. .|.+||||++. .+..+|+++. +++||+|||+|.|.+. ...|.|+|||+| +++|+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCC
Confidence 45899999999998853 67899999999 3344555554 7999999999999985 467999999999 89999
Q ss_pred eeEEEEEEccccCCCC--ceeeEEec
Q 004872 585 SIGDCVVEYQRLPPNQ--MADKWIPL 608 (726)
Q Consensus 585 ~lG~~~i~l~~l~~~~--~~~~w~~L 608 (726)
+||++.++|.++.... ....|.++
T Consensus 77 ~iG~~~i~l~~l~~~~~~~~~~~~~~ 102 (131)
T 2cjt_A 77 MVGTVWIPLRTIRQSNEEGPGEWLTL 102 (131)
T ss_dssp EEEEEEEEGGGSCBCSSCCCCEEEEC
T ss_pred eEEEEEEEHHHhhhcCCCCccccEEc
Confidence 9999999999985432 22256555
No 59
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.63 E-value=7.9e-16 Score=144.33 Aligned_cols=105 Identities=30% Similarity=0.457 Sum_probs=94.1
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeecccc-CCCCCceeeEEEEEeeCC--ceeEEEEEEeecCC-
Q 004872 380 KINVTVVEGKDLMPKDKSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF- 450 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg-----~~~~kT~~~-~t~nP~wne~f~f~v~~~--~~~l~i~V~d~~~~- 450 (726)
.|.|+|++|++|+.++..+.+||||+++++ ...+||+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 32 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~ 111 (149)
T 1a25_A 32 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTS 111 (149)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSS
T ss_pred EEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCCC
Confidence 799999999999999989999999999994 468999999 999999999999998653 46899999999988
Q ss_pred CCcceEEEEEEccccccCCeeeeeeecccccccee
Q 004872 451 GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGEL 485 (726)
Q Consensus 451 ~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I 485 (726)
++++||++.++|.++..+ ....||+|.+...|++
T Consensus 112 ~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 112 RNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp CCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 899999999999999765 4679999998766765
No 60
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.63 E-value=1.2e-15 Score=143.79 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=89.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~------~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~ 448 (726)
+.|.|+|++|+||+.++.+|.+||||++++.. .++||+++ ++.||+|||+|.|.+... ...|.|+|||++
T Consensus 43 ~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d 122 (155)
T 2z0u_A 43 KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTD 122 (155)
T ss_dssp TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECC
Confidence 38999999999999999999999999999943 27999999 999999999999997653 568999999999
Q ss_pred CC-CCcceEEEEEEcccccc-CCeeeeeeecc
Q 004872 449 IF-GDENMGSARVNLEGLVE-GSVRDIWVPLE 478 (726)
Q Consensus 449 ~~-~d~~iG~~~i~L~~l~~-~~~~~~w~~L~ 478 (726)
.. ++++||++.++|.++.. +.....||+|.
T Consensus 123 ~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 123 RSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp TTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 88 89999999999999963 55678999985
No 61
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.62 E-value=1.3e-15 Score=142.61 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=90.7
Q ss_pred cEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKD-KSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d-~~g~~dpyv~v~lg-----~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~ 448 (726)
+.|.|+|++|++|+.++ ..|.+||||++++. ...++|+++ ++.||.|||+|.|.+... ...|.|+|||++
T Consensus 23 ~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d 102 (148)
T 3fdw_A 23 QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHG 102 (148)
T ss_dssp TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEEC
T ss_pred CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECC
Confidence 38999999999999888 57899999999994 348999999 999999999999997663 457999999999
Q ss_pred CC-CCcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 449 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 449 ~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
.. ++++||++.++|.++..+.....||+|.++.
T Consensus 103 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 103 RFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp GGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 88 7999999999999998776778999998753
No 62
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.62 E-value=2.4e-15 Score=135.49 Aligned_cols=112 Identities=13% Similarity=0.167 Sum_probs=98.4
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeee-CCCCCeeeeEEEEec-----CCCeEEEEEEECCCCC
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPD-----DGSPLTLHVRDHNALL 581 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~~~f~v-----~~~~l~i~V~d~d~~~ 581 (726)
..-.|+|.|.+|.+|+ |.+|||+++.+-+.+++|++++ +++||+|||.|.|++ .+..|.+.|+|+++++
T Consensus 19 ~~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~ 93 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVF 93 (144)
T ss_dssp CCEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTS
T ss_pred CcEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcccc
Confidence 3467999999999998 5899999999999999999998 599999999999997 3688999999999999
Q ss_pred CCCeeEEEEEEccccCCCCceeeEEecCCCC----CeEEEEEEEEEe
Q 004872 582 ASSSIGDCVVEYQRLPPNQMADKWIPLQGVR----KGEIHVLITRKV 624 (726)
Q Consensus 582 ~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~----~G~i~l~l~~~~ 624 (726)
++++||++.++|.++........+-+|.+.. .++|.++++|+-
T Consensus 94 ~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~p 140 (144)
T 3l9b_A 94 SNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA 140 (144)
T ss_dssp CCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecC
Confidence 9999999999999998776666777775432 389999999943
No 63
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.61 E-value=5.3e-15 Score=137.42 Aligned_cols=101 Identities=29% Similarity=0.489 Sum_probs=90.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeecccc-CCCCCceeeEEEEE-eeCC---ceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELD-EIGG---GECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~-----~~~kT~~~-~t~nP~wne~f~f~-v~~~---~~~l~i~V~d~~ 448 (726)
+.|.|+|++|++|+.++..|.+||||+++++. ..+||+++ ++.||.|||.|.|. +... ...|.|+|||++
T Consensus 29 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 108 (142)
T 2chd_A 29 SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDED 108 (142)
T ss_dssp TEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECC
Confidence 48999999999999999899999999999943 68999999 99999999999998 4332 368999999999
Q ss_pred CC-CCcceEEEEEEccccccCCeeeeeeeccc
Q 004872 449 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEK 479 (726)
Q Consensus 449 ~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~ 479 (726)
.. ++++||++.++|.++..+.....|++|+.
T Consensus 109 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 109 KFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp TTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 88 78999999999999988888888998875
No 64
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.60 E-value=1.5e-15 Score=141.09 Aligned_cols=102 Identities=23% Similarity=0.418 Sum_probs=90.3
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECC--------------eEeecccc-CCCCCceeeEEEEE-eeC---CceeE
Q 004872 380 KINVTVVEGKDLMPKDKSGKCDPYVKLQYGK--------------IVQRTRTA-HSPNHVWNQKFELD-EIG---GGECL 440 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~--------------~~~kT~~~-~t~nP~wne~f~f~-v~~---~~~~l 440 (726)
.|.|+|++|++|+.++..|.+||||+++++. ..+||+++ ++.||.|||.|.|. +.. ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 7999999999999999999999999999953 25899999 99999999999997 432 36789
Q ss_pred EEEEEeecCC-CCcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 441 MVKCYNEEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 441 ~i~V~d~~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
.|+|||++.. ++++||++.++|.++........||+|.+..
T Consensus 99 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 99 EVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 9999999988 7899999999999998766778999998754
No 65
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.59 E-value=1e-14 Score=134.86 Aligned_cols=100 Identities=19% Similarity=0.279 Sum_probs=87.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC----CeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG----KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg----~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~ 450 (726)
+.|.|+|++|++ ++..|.+||||++++. ...++|+++ ++.||+|||+|.|.+... ...|.|+|||++..
T Consensus 26 ~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~ 102 (138)
T 1wfm_A 26 AELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRF 102 (138)
T ss_dssp TEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCC
Confidence 389999999994 5778999999999992 236899999 999999999999997653 56899999999988
Q ss_pred -CCcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 451 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 451 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
++++||++.++|.++..+.....|++|.+..
T Consensus 103 ~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 103 SRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 8999999999999997666778999998754
No 66
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=8.8e-15 Score=135.91 Aligned_cols=102 Identities=23% Similarity=0.282 Sum_probs=88.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 449 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg-----~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~ 449 (726)
+.|.|+|++|++|+.++..| +||||++++. ...++|+++ ++.||+|||+|.|.+... ...|.|+|||++.
T Consensus 24 ~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 102 (142)
T 2dmg_A 24 NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG 102 (142)
T ss_dssp TEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC
T ss_pred CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC
Confidence 38999999999999999888 9999999992 268899999 999999999999997542 4589999999997
Q ss_pred C-C--CcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 450 F-G--DENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 450 ~-~--d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
. . +++||++.++|.++........||+|.+.+
T Consensus 103 ~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 103 FLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred ccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 6 3 469999999999998766778999998753
No 67
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.59 E-value=2.5e-14 Score=132.13 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=88.3
Q ss_pred cEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeEeecccc-CCCCCceeeEEEEE-eeC---CceeEEEEEEeecC
Q 004872 379 RKINVTVVEGKDLMPKDKS-GKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELD-EIG---GGECLMVKCYNEEI 449 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~-g~~dpyv~v~lg---~~~~kT~~~-~t~nP~wne~f~f~-v~~---~~~~l~i~V~d~~~ 449 (726)
+.|.|+|++|++|+.++.. +.+||||++++. ...++|+++ ++.||+|||+|.|. +.. ....|.|+|||++.
T Consensus 22 ~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~ 101 (138)
T 1ugk_A 22 KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR 101 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC
Confidence 3899999999999999985 899999999993 479999999 99999999999996 443 24689999999998
Q ss_pred C-CCcceEEEEEEccccccCC-eeeeeeecccc
Q 004872 450 F-GDENMGSARVNLEGLVEGS-VRDIWVPLEKV 480 (726)
Q Consensus 450 ~-~d~~iG~~~i~L~~l~~~~-~~~~w~~L~~~ 480 (726)
. ++++||++.++|.++..+. ....|++|...
T Consensus 102 ~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 102 FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 8 8899999999999997654 34567988764
No 68
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.59 E-value=4.1e-15 Score=142.78 Aligned_cols=103 Identities=25% Similarity=0.308 Sum_probs=91.1
Q ss_pred cEEEEEEEEeecCCCCCC-CCCCCcEEEEEEC--C---eEeecccc-CCCCCceeeEEEEEeeCCceeEEEEEE-eecCC
Q 004872 379 RKINVTVVEGKDLMPKDK-SGKCDPYVKLQYG--K---IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCY-NEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~-~g~~dpyv~v~lg--~---~~~kT~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~-d~~~~ 450 (726)
+.|.|+|++|++|+.+|. .|.+||||++++. . ..+||+++ ++.||+|||+|.|.+......|.|+|| |++..
T Consensus 30 ~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~ 109 (171)
T 2q3x_A 30 GQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRM 109 (171)
T ss_dssp TEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECSTT
T ss_pred CEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCCC
Confidence 389999999999999985 7999999999993 2 38999999 999999999999998667889999999 99888
Q ss_pred -CCcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 451 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 451 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
++++||++.++|.++..+.....||+|.+..
T Consensus 110 ~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 110 DHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp CSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 7899999999999998777788999998753
No 69
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=7.3e-15 Score=137.34 Aligned_cols=103 Identities=19% Similarity=0.279 Sum_probs=88.5
Q ss_pred cEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CeEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEE
Q 004872 379 RKINVTVVEGKDLMPK-DK------SGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKC 444 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~-d~------~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V 444 (726)
+.|.|+|++|++|+.+ +. .+.+||||++++. ...++|+++ ++.||+|||+|.|.+... ...|.|+|
T Consensus 26 ~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V 105 (147)
T 2enp_A 26 NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTV 105 (147)
T ss_dssp TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEE
T ss_pred CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEE
Confidence 4899999999999874 43 3589999999994 468899999 999999999999997542 45899999
Q ss_pred EeecCC-CCcceEEEEEEccccccCCeeeeeeeccccc
Q 004872 445 YNEEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 481 (726)
Q Consensus 445 ~d~~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~ 481 (726)
||++.. ++++||++.++|.++........|++|.+..
T Consensus 106 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 143 (147)
T 2enp_A 106 VDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSG 143 (147)
T ss_dssp ECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCCC
T ss_pred EECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecCC
Confidence 999988 7899999999999998766667899998753
No 70
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.58 E-value=1.7e-14 Score=133.07 Aligned_cols=88 Identities=19% Similarity=0.348 Sum_probs=78.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 449 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~-----~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~ 449 (726)
+.|.|+|++|++|+.++..|.+||||+++++. ..++|+++ ++.||.|||.|.|.+... ...|.|+|||++.
T Consensus 16 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~ 95 (138)
T 3n5a_A 16 NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK 95 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS
T ss_pred CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC
Confidence 48999999999999999899999999999942 58899999 999999999999997654 3689999999998
Q ss_pred C-CCcceEEEEEEccccc
Q 004872 450 F-GDENMGSARVNLEGLV 466 (726)
Q Consensus 450 ~-~d~~iG~~~i~L~~l~ 466 (726)
. ++++||++.+++.++.
T Consensus 96 ~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 96 LSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp SSCCEEEEEEEESSSSCH
T ss_pred CCCCcEEEEEEEccccCC
Confidence 8 8999999999999753
No 71
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.58 E-value=2e-14 Score=136.28 Aligned_cols=105 Identities=20% Similarity=0.303 Sum_probs=89.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG--K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 449 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg--~---~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~ 449 (726)
+.|.|+|++|+||+.++..|.+||||+++++ + ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 25 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 104 (159)
T 1tjx_A 25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104 (159)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC
Confidence 4899999999999999989999999999993 2 47899999 999999999999997653 4679999999998
Q ss_pred C-CCcceEEEEEEcccc----------cc--CCeeeeeeeccccccc
Q 004872 450 F-GDENMGSARVNLEGL----------VE--GSVRDIWVPLEKVNTG 483 (726)
Q Consensus 450 ~-~d~~iG~~~i~L~~l----------~~--~~~~~~w~~L~~~~~G 483 (726)
. ++++||++.+++..+ .. +.....||+|.+...|
T Consensus 105 ~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~~~ 151 (159)
T 1tjx_A 105 IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEEV 151 (159)
T ss_dssp SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHHHH
T ss_pred CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcccc
Confidence 8 799999999999853 22 3356789999875443
No 72
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=1.2e-14 Score=162.59 Aligned_cols=110 Identities=24% Similarity=0.437 Sum_probs=98.4
Q ss_pred CCCceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeeeCCCCCeeeeEEEEec----CCCeEEEEEEECCCCC
Q 004872 506 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPD----DGSPLTLHVRDHNALL 581 (726)
Q Consensus 506 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~~~f~v----~~~~l~i~V~d~d~~~ 581 (726)
....+.|+|+|++|++|+. |..|.+||||+|.+++++++|+++++++||+|||+|.|.+ ....|.|+|||+|.++
T Consensus 390 ~~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~ 468 (540)
T 3nsj_A 390 QRGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGW 468 (540)
T ss_dssp STTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSS
T ss_pred cCcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCC
Confidence 3457899999999999998 9999999999999999999999999999999999999984 3678999999999999
Q ss_pred CCCeeEEEEEEccccCCCCceeeEEecCCCCCeEEEEEEEEE
Q 004872 582 ASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGEIHVLITRK 623 (726)
Q Consensus 582 ~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~l~~~ 623 (726)
+||+||++.++|. .+ ....|++|. .|+|+++++..
T Consensus 469 ~dD~LG~~~~~L~---~g-~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 469 DDDLLGSCDRSPH---SG-FHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp CCEEEEEEEECCC---SE-EEEEEEECS---SSEEEEEEEEE
T ss_pred CCCEEEEEEEEee---CC-cEEEEEEcC---CeEEEEEEEEE
Confidence 9999999999987 23 467899876 59999998874
No 73
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.57 E-value=4.6e-15 Score=135.63 Aligned_cols=87 Identities=14% Similarity=0.188 Sum_probs=74.0
Q ss_pred cccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEEccEEeeeecC-CCCCCcccceeEEEE
Q 004872 184 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDAR-PGSDPRWDSMFNMVL 262 (726)
Q Consensus 184 ~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~g~~~rTt~i~-~t~nP~WnEtf~~~v 262 (726)
+.|.|.|+|++|++|+. .|.+ ||||+|+ +...+|++++ ++.||+|||+|.|.+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~----------------------DPYv~v~-~~~~kt~~~~~~t~nP~WnE~f~f~v 56 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKF----------------------NTYVTLK-VQNVKSTTIAVRGSQPSWEQDFMFEI 56 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGC----------------------EEEEEEE-ETTEEEECCCEESSSCEEEEEEEEEE
T ss_pred cceEEEEEEEEeECCCC---CCCc----------------------CeEEEEE-ecCEEEeEecCCCCCceECCEEEEEE
Confidence 56999999999998853 3433 9999999 5445666665 799999999999999
Q ss_pred ecCCceEEEEEEEeCCCCCCcceeEEEEEeceeccC
Q 004872 263 HEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 298 (726)
Q Consensus 263 ~~~~~~L~~~V~D~d~~~~~dd~lG~~~i~L~~l~~ 298 (726)
.+....|.|+|||+| . .+||+||++.|+|.++..
T Consensus 57 ~~~~~~L~~~V~D~d-~-~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 57 NRLDLGLTVEVWNKG-L-IWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp CCCSSEEEEEEEECC-S-SCEEEEEEEEEEGGGSCB
T ss_pred eCCCCeEEEEEEECC-C-CCCCeEEEEEEEHHHhhh
Confidence 877778999999999 5 789999999999999874
No 74
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.56 E-value=2.3e-14 Score=136.46 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=73.2
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECCeEEEeEeee-CCCCCeeeeEEEEecC--CCeEEEEEEECCCCCCCC
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD--GSPLTLHVRDHNALLASS 584 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~~~f~v~--~~~l~i~V~d~d~~~~d~ 584 (726)
..+.|+|+|++|++++ ..|.+||||+++ .+..+|++++ +++||+|||+|.|.+. ...|.|+|||+| +++|+
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCE
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCc
Confidence 3689999999999885 367899999999 3445676665 6999999999999985 468999999999 88999
Q ss_pred eeEEEEEEccccCC
Q 004872 585 SIGDCVVEYQRLPP 598 (726)
Q Consensus 585 ~lG~~~i~l~~l~~ 598 (726)
+||++.|+|..+..
T Consensus 86 ~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEEGGGSCB
T ss_pred eEEEEEEEHHHhcc
Confidence 99999999999854
No 75
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.55 E-value=6.7e-14 Score=133.64 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=85.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 449 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~-----~~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~ 449 (726)
+.|.|+|++|++|+.++.+|.+||||+++++. ..++|+++ ++.||+|||+|.|.+... ...|.|+|||++.
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 116 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI 116 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC
Confidence 48999999999999999999999999999943 68999999 999999999999997653 5689999999998
Q ss_pred C-CCcceEEEEEEccccccCCeeeeeeecccc
Q 004872 450 F-GDENMGSARVNLEGLVEGSVRDIWVPLEKV 480 (726)
Q Consensus 450 ~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~ 480 (726)
. ++++||++.+++.++.. ....||+|...
T Consensus 117 ~~~~~~iG~~~i~l~~~~~--~~~~W~~l~~~ 146 (166)
T 2cm5_A 117 GKSNDYIGGCQLGISAKGE--RLKHWYECLKN 146 (166)
T ss_dssp SSCCEEEEEEEEETTCCHH--HHHHHHHHHHC
T ss_pred CCCCcEEEeEEEecccCCc--hhHHHHHHHhC
Confidence 8 78999999999998632 33456666543
No 76
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.53 E-value=1e-13 Score=130.40 Aligned_cols=99 Identities=26% Similarity=0.371 Sum_probs=78.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---Eeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI---VQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 449 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l--g~~---~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~ 449 (726)
+.|.|+|++|++|+.++..|.+||||++++ ++. .+||+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 489999999999999998899999999999 433 7899999 999999999999997664 4789999999998
Q ss_pred C-CCcceEEEEEEccccccCCeeeeeeeccc
Q 004872 450 F-GDENMGSARVNLEGLVEGSVRDIWVPLEK 479 (726)
Q Consensus 450 ~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~ 479 (726)
. ++++||++.+++.+ .+.....|++|..
T Consensus 110 ~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 110 GSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp TSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred CCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 8 79999999999988 2333445666554
No 77
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.52 E-value=2.3e-14 Score=136.45 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=74.3
Q ss_pred cccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEEccEEeeeecC-CCCCCcccceeEEEE
Q 004872 184 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDAR-PGSDPRWDSMFNMVL 262 (726)
Q Consensus 184 ~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~g~~~rTt~i~-~t~nP~WnEtf~~~v 262 (726)
+.|+|.|+|++|++|.. .|.+ ||||+|+ +...+|++++ ++.||+|||+|.|.+
T Consensus 12 ~~~~L~V~V~~A~~l~~---~g~~----------------------DPYV~v~-~~~~kt~~~~~~t~nP~WnE~f~f~v 65 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDGA---QEKF----------------------NTYVTLK-VQNVESTTIAVRGSQPSWEQDFMFEI 65 (167)
T ss_dssp CCCEEEEEEEEEECSSC---GGGC----------------------EEEEEEE-ETTEEEECCCEESSSCEEEEEEEEEC
T ss_pred ceEEEEEEEEEEECCCC---CCCC----------------------CeEEEEE-ecceEEEEecCCCCCCCCCCEEEEEe
Confidence 56899999999998842 3433 9999999 5555677765 699999999999999
Q ss_pred ecCCceEEEEEEEeCCCCCCcceeEEEEEeceeccC
Q 004872 263 HEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 298 (726)
Q Consensus 263 ~~~~~~L~~~V~D~d~~~~~dd~lG~~~i~L~~l~~ 298 (726)
.+....|.|+|||+| . .+||+||++.|+|.++..
T Consensus 66 ~~~~~~L~~~V~D~d-~-~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 66 NRLDLGLTVEVWNKG-L-IWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp CCTTSEEEEEEEECC-S-SCCEEEEEEEEEGGGSCB
T ss_pred eCCCCEEEEEEEECC-C-CCCceEEEEEEEHHHhcc
Confidence 877788999999999 5 789999999999999874
No 78
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.49 E-value=1.7e-13 Score=153.25 Aligned_cols=87 Identities=16% Similarity=0.240 Sum_probs=77.3
Q ss_pred cccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEEc-cEEeeeecCCCCCCcccceeEEEE
Q 004872 184 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE-ELTRRTDARPGSDPRWDSMFNMVL 262 (726)
Q Consensus 184 ~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~g-~~~rTt~i~~t~nP~WnEtf~~~v 262 (726)
..|.|.|+|++|++|+. |..|.+ ||||+|.++ ...||+++++++||+|||+|.|.+
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~s----------------------DPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~ 448 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTAT----------------------DAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFEN 448 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCC----------------------CEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEE
T ss_pred cccEEEEEEEEccCCCc-ccCCCc----------------------CeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEE
Confidence 36899999999999998 877765 999999996 468899999999999999999986
Q ss_pred ec--CCceEEEEEEEeCCCCCCcceeEEEEEece
Q 004872 263 HE--ETGTVRFNLYECIPGHVKYDYLTSCEVKMK 294 (726)
Q Consensus 263 ~~--~~~~L~~~V~D~d~~~~~dd~lG~~~i~L~ 294 (726)
.+ ..+.|+|+|||+|.. .+||+||++.++|.
T Consensus 449 ~~~~~~~~L~~~V~D~D~~-~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 449 VLLSTGGPLRVQVWDADYG-WDDDLLGSCDRSPH 481 (540)
T ss_dssp EETTTCCCEEEEEEECCSS-SCCEEEEEEEECCC
T ss_pred ecCCCCCEEEEEEEECCCC-CCCCEEEEEEEEee
Confidence 54 478999999999986 78899999999985
No 79
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.49 E-value=5.3e-14 Score=162.10 Aligned_cols=109 Identities=22% Similarity=0.382 Sum_probs=98.6
Q ss_pred CCceEEEEEEEEeecCcc---cccCCCCccEEEEEECC---eEEEeEeeeCCCCCeeeeEEEEecC---CCeEEEEEEEC
Q 004872 507 SGNGWIELVIVEARDLVA---ADLRGTSDPYVKVQYGD---LKKRTKVIFKTLNPQWHQTLEFPDD---GSPLTLHVRDH 577 (726)
Q Consensus 507 ~~~g~L~v~v~~a~~L~~---~d~~g~~DPyv~v~~~~---~~~kT~v~~~t~nP~wne~~~f~v~---~~~l~i~V~d~ 577 (726)
.+.+.|+|+|++|++|+. +|..|.+||||++++++ .++||+++++++||+|||+|.|.+. ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 567999999999999999 88889999999999974 6889999999999999999999985 47899999999
Q ss_pred CCCCCCCeeEEEEEEccccCCCCceeeEEecCCCCCeEEEE
Q 004872 578 NALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGEIHV 618 (726)
Q Consensus 578 d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l 618 (726)
|.++ |++||++.++|.++..+.....|++|.+. +++.+
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~--~e~~l 132 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV--TEMVL 132 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT--EEEEE
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC--ceEee
Confidence 9999 99999999999999888888999999864 44443
No 80
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.47 E-value=1.9e-13 Score=154.55 Aligned_cols=115 Identities=21% Similarity=0.346 Sum_probs=103.9
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCceeeEEEEEeeCC-ceeEEEEEEeecCC-CCcc
Q 004872 378 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGG-GECLMVKCYNEEIF-GDEN 454 (726)
Q Consensus 378 ~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~wne~f~f~v~~~-~~~l~i~V~d~~~~-~d~~ 454 (726)
.+.|.|+|++|++|+.+|..|.+||||++++++..++|+++ ++.||.|||.|.|.+... ...|.|+|||++.. +|++
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~ 465 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDF 465 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCCE
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCCc
Confidence 35899999999999999999999999999999999999999 999999999999998665 57899999999998 7999
Q ss_pred eEEEEEEccccccCCe----eeeeeeccccccceeEEEEEEE
Q 004872 455 MGSARVNLEGLVEGSV----RDIWVPLEKVNTGELRLQIEAT 492 (726)
Q Consensus 455 iG~~~i~L~~l~~~~~----~~~w~~L~~~~~G~I~l~~~~~ 492 (726)
||++.+++.++..+.. ...|++|.+...|+|.+++++.
T Consensus 466 lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 466 LGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred eEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 9999999999976443 6789999998899999988754
No 81
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.47 E-value=2.9e-13 Score=154.85 Aligned_cols=113 Identities=19% Similarity=0.300 Sum_probs=97.4
Q ss_pred CCceEEEEEEEEeecCccccc--CCCCccEEEEEECC-----eEEEeEeeeCC-CCCeeeeEEEEecC---CCeEEEEEE
Q 004872 507 SGNGWIELVIVEARDLVAADL--RGTSDPYVKVQYGD-----LKKRTKVIFKT-LNPQWHQTLEFPDD---GSPLTLHVR 575 (726)
Q Consensus 507 ~~~g~L~v~v~~a~~L~~~d~--~g~~DPyv~v~~~~-----~~~kT~v~~~t-~nP~wne~~~f~v~---~~~l~i~V~ 575 (726)
...+.|+|+|++|++|+..+. .|.+||||+|.+.+ .++||++++++ +||+|||+|.|.+. ...|.|+||
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 367899999999999998874 78999999999944 68899999997 99999999999985 367999999
Q ss_pred ECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC-----CeEEEEEEEE
Q 004872 576 DHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 622 (726)
Q Consensus 576 d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 622 (726)
|+|.+++|++||++.++|..+..+. +|++|.+.. .|.|.+.+++
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISI 622 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEE
Confidence 9999999999999999999998753 689986432 3777777776
No 82
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.43 E-value=1e-12 Score=118.46 Aligned_cols=111 Identities=17% Similarity=0.240 Sum_probs=97.4
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc--CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-CCc
Q 004872 380 KINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDE 453 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~~kT~~~--~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~-~d~ 453 (726)
.|+|.|.+|.+|+ |.+|||+++.+.+.+++|+++ ++.||+|||.|+|.+..+ .+.|.|.|+|+++. ++.
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 7999999999998 578999999999999999999 499999999999997653 78999999999998 999
Q ss_pred ceEEEEEEccccccCCeeeeeeeccccc----cceeEEEEEEEEec
Q 004872 454 NMGSARVNLEGLVEGSVRDIWVPLEKVN----TGELRLQIEATRVD 495 (726)
Q Consensus 454 ~iG~~~i~L~~l~~~~~~~~w~~L~~~~----~G~I~l~~~~~~~~ 495 (726)
+||++.++|.++...+....+-+|.+.+ .++|.++++|.+.+
T Consensus 97 lIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred EEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 9999999999998777655666776543 48999999999753
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.35 E-value=7.9e-14 Score=155.59 Aligned_cols=97 Identities=22% Similarity=0.353 Sum_probs=14.9
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECCe-EEEeEeeeCC---CCCeeeeEEEEecC--CCeEEEEEEEC-C--
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDL-KKRTKVIFKT---LNPQWHQTLEFPDD--GSPLTLHVRDH-N-- 578 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~-~~kT~v~~~t---~nP~wne~~~f~v~--~~~l~i~V~d~-d-- 578 (726)
..+.|+|+|++|++|+++| ||||++++++. ..||+++++| +||+|||+|.|.+. ...|.|+|||+ |
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EEECC--------------------------------------------------CCEECC-------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 3478999999999999876 99999999876 6799999999 99999999999953 47899999994 4
Q ss_pred -CCCCCCeeEEEEEEccccCCCCceeeEEecC
Q 004872 579 -ALLASSSIGDCVVEYQRLPPNQMADKWIPLQ 609 (726)
Q Consensus 579 -~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~ 609 (726)
..++|++||++.|++..+..+...+.|++|.
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp -----------------------CCEECC---
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 3688999999999999998888889999994
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.31 E-value=2.5e-12 Score=148.28 Aligned_cols=92 Identities=15% Similarity=0.302 Sum_probs=81.9
Q ss_pred ccccEEEEEEEeecCCCC---CCCCCCCcccccccCCCCccccccCCCCcCcEEEEEEc----cEEeeeecCCCCCCccc
Q 004872 183 AVGGIVYVRVISASKLSR---SSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE----ELTRRTDARPGSDPRWD 255 (726)
Q Consensus 183 ~~~GvL~V~v~~A~~L~~---~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~g----~~~rTt~i~~t~nP~Wn 255 (726)
.+.|.|.|+|++|++|+. +|..|.+ ||||+|+++ ...||+++++++||+||
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~s----------------------DPYV~V~l~~~~~~k~kTkvik~tlNPvWN 72 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTP----------------------DPYVELFISTTPDSRKRTRHFNNDINPVWN 72 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCC----------------------CEEEEEECTTSTTCCEECCCCTTCSSCEEE
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCc----------------------CeEEEEEEecCCCCeEecceEcCCCCCeee
Confidence 467999999999999998 7766654 999999996 46789999999999999
Q ss_pred ceeEEEEecC-CceEEEEEEEeCCCCCCcceeEEEEEeceeccC
Q 004872 256 SMFNMVLHEE-TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVAD 298 (726)
Q Consensus 256 Etf~~~v~~~-~~~L~~~V~D~d~~~~~dd~lG~~~i~L~~l~~ 298 (726)
|+|.|.+... .+.|.|+|||+|.. . +++||++.++|.+|..
T Consensus 73 EtF~F~v~~~~~~~L~~~V~D~D~~-~-ddfIG~v~I~L~~L~~ 114 (749)
T 1cjy_A 73 ETFEFILDPNQENVLEITLMDANYV-M-DETLGTATFTVSSMKV 114 (749)
T ss_dssp EEEEEEECTTSCCBCEEEEEECCSS-S-CEEEEEECCBSTTSCT
T ss_pred eEEEEEecCCCCCEEEEEEEECCCC-C-CceeEEEEEEHHHcCC
Confidence 9999999874 67999999999987 5 9999999999999864
No 85
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.26 E-value=8.8e-12 Score=145.40 Aligned_cols=112 Identities=28% Similarity=0.502 Sum_probs=97.9
Q ss_pred cceeEEEEEEEEecCCCCCCCCCCCCCceEEEEEEEEeecCcccccCCCCccEEEEEE-----CCeEEEeEeeeCCCCCe
Q 004872 482 TGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNPQ 556 (726)
Q Consensus 482 ~G~I~l~~~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP~ 556 (726)
.|+|.++..+. .+.|.|+|.+|++|+++|..|.+||||++.+ ...+.+|+++++++||.
T Consensus 160 ~g~i~~~~~~~----------------~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~ 223 (674)
T 3pfq_A 160 RGRIYIQAHID----------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPE 223 (674)
T ss_dssp SCEEEEEEEEC----------------SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCE
T ss_pred cccccccceec----------------cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCC
Confidence 57777776542 4789999999999999999999999999999 34678999999999999
Q ss_pred eeeEEEEecC----CCeEEEEEEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCC
Q 004872 557 WHQTLEFPDD----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQG 610 (726)
Q Consensus 557 wne~~~f~v~----~~~l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~ 610 (726)
|||+|.|.+. ...|.++|||+|.+++|++||++.+++.++.... .+.|+.|.+
T Consensus 224 wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 224 WNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp EEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred ccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeecc
Confidence 9999999984 3569999999999999999999999999986654 589999854
No 86
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.22 E-value=6.6e-11 Score=135.44 Aligned_cols=112 Identities=19% Similarity=0.274 Sum_probs=93.6
Q ss_pred ccEEEEEEEEeecCCCCCC--CCCCCcEEEEEE-C----CeEeecccc-CC-CCCceeeEEEEEeeCC-ceeEEEEEEee
Q 004872 378 GRKINVTVVEGKDLMPKDK--SGKCDPYVKLQY-G----KIVQRTRTA-HS-PNHVWNQKFELDEIGG-GECLMVKCYNE 447 (726)
Q Consensus 378 ~~~L~V~V~~a~~L~~~d~--~g~~dpyv~v~l-g----~~~~kT~~~-~t-~nP~wne~f~f~v~~~-~~~l~i~V~d~ 447 (726)
.+.|.|+|++|++|+..+. .+.+||||+|.+ + ...+||+++ ++ .||+|||+|.|.+..+ ...|.|+|||+
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~ 575 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDY 575 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEEC
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEc
Confidence 3589999999999998873 689999999999 4 368999999 76 9999999999998765 46899999999
Q ss_pred cCC-CCcceEEEEEEccccccCCeeeeeeeccccc-----cceeEEEEEEE
Q 004872 448 EIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEAT 492 (726)
Q Consensus 448 ~~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~I~l~~~~~ 492 (726)
+.. ++++||++.++|..+..+ .+|++|.+.. .|.|.+.+++.
T Consensus 576 D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 576 DSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 988 899999999999999654 3689997642 35666666654
No 87
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.21 E-value=1.2e-12 Score=146.04 Aligned_cols=98 Identities=19% Similarity=0.406 Sum_probs=14.4
Q ss_pred CccEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-Eeecccc-CC---CCCceeeEEEEEeeCCceeEEEEEEee-c--
Q 004872 377 TGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKI-VQRTRTA-HS---PNHVWNQKFELDEIGGGECLMVKCYNE-E-- 448 (726)
Q Consensus 377 ~~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~-~~kT~~~-~t---~nP~wne~f~f~v~~~~~~l~i~V~d~-~-- 448 (726)
..+.|.|+|++|++|+.++ ||||++++++. ..||+++ ++ .||.|||+|.|.+.+....|.|+|||+ +
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EEECC--------------------------------------------------CCEECC-------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 4458999999999999876 99999999654 7799999 88 999999999998765568899999994 4
Q ss_pred -CC-CCcceEEEEEEccccccCCeeeeeeeccc
Q 004872 449 -IF-GDENMGSARVNLEGLVEGSVRDIWVPLEK 479 (726)
Q Consensus 449 -~~-~d~~iG~~~i~L~~l~~~~~~~~w~~L~~ 479 (726)
.. +|++||.+.+++.++..+...+.||+|.+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -----------------------CCEECC----
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 23 79999999999999987777889999953
No 88
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.09 E-value=3.4e-10 Score=131.86 Aligned_cols=104 Identities=23% Similarity=0.331 Sum_probs=85.8
Q ss_pred CceEEEEEEEEeecCcccccCCCCccEEEEEECC-------eEEEeEeeeC-CCCCeeeeE-EEEe-cC---CCeEEEEE
Q 004872 508 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-------LKKRTKVIFK-TLNPQWHQT-LEFP-DD---GSPLTLHV 574 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-------~~~kT~v~~~-t~nP~wne~-~~f~-v~---~~~l~i~V 574 (726)
..+.|+|+|++|++|+.. .+||||+|.+.+ .+++|+++++ ++||+|||+ |.|. +. -..|+|+|
T Consensus 648 ~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V 723 (816)
T 3qr0_A 648 VAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIV 723 (816)
T ss_dssp CCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred cceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEE
Confidence 358899999999999853 689999999954 5679999986 699999998 9998 63 36799999
Q ss_pred EECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC-----CeEEEEEEEE
Q 004872 575 RDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 622 (726)
Q Consensus 575 ~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 622 (726)
||++ +++||++.+||+.+..|. ++++|.+.. .+.|.+.+++
T Consensus 724 ~D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 724 SEEN----GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVA 769 (816)
T ss_dssp EETT----SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EecC----CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEE
Confidence 9985 789999999999998874 577776533 2677777777
No 89
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.02 E-value=5.5e-10 Score=130.80 Aligned_cols=103 Identities=15% Similarity=0.262 Sum_probs=85.0
Q ss_pred ceEEEEEEEEeecCcccccCCCCccEEEEEECC------eEEEeEeeeC-CCCCeeee-EEEEe-cC---CCeEEEEEEE
Q 004872 509 NGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFK-TLNPQWHQ-TLEFP-DD---GSPLTLHVRD 576 (726)
Q Consensus 509 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~-t~nP~wne-~~~f~-v~---~~~l~i~V~d 576 (726)
...|+|+|++|++|+.. .+||||+|.+.+ .+++|+++++ ++||+||| +|.|. +. -..|+|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 45899999999999853 689999999954 3579999986 59999999 69998 63 3679999999
Q ss_pred CCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC-----CeEEEEEEEE
Q 004872 577 HNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 622 (726)
Q Consensus 577 ~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 622 (726)
+| +++||++.+||..|..+. ++++|.+.. .|.|.+.+++
T Consensus 800 ~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~ 843 (885)
T 3ohm_B 800 EG----GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEA 843 (885)
T ss_dssp TT----TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CC----ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEE
Confidence 87 789999999999998764 567775432 3788888887
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.02 E-value=8.5e-10 Score=129.29 Aligned_cols=105 Identities=15% Similarity=0.244 Sum_probs=83.9
Q ss_pred CCceEEEEEEEEeecCcccccCCCCccEEEEEECC------eEEEeE-eeeC-CCCCeeee-EEEE-ecC---CCeEEEE
Q 004872 507 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTK-VIFK-TLNPQWHQ-TLEF-PDD---GSPLTLH 573 (726)
Q Consensus 507 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~-v~~~-t~nP~wne-~~~f-~v~---~~~l~i~ 573 (726)
...+.|.|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ ++||+||| +|.| .+. -..|+|+
T Consensus 675 ~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~ 750 (799)
T 2zkm_X 675 VVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVA 750 (799)
T ss_dssp TTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEE
T ss_pred eeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEE
Confidence 346899999999999985 4789999999932 367999 7765 69999999 7999 763 3579999
Q ss_pred EEECCCCCCCCeeEEEEEEccccCCCCceeeEEecCCCC-----CeEEEEEEEE
Q 004872 574 VRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 622 (726)
Q Consensus 574 V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 622 (726)
|||+| +++||++.+||+.+..+. +|++|.+.. .+.|.+.+++
T Consensus 751 V~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 751 VMEEG----NKFLGHRIIPINALNSGY---HHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp EEETT----TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEEeC----CCccceEeeehhhcCCCc---EEEeccCCCCCCCCceEEEEEEEE
Confidence 99997 789999999999998764 577775432 2566666655
No 91
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.99 E-value=7.5e-10 Score=129.05 Aligned_cols=105 Identities=30% Similarity=0.489 Sum_probs=92.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCceeeEEEEEeeCC--ceeEEEEEEeecCC
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF 450 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~wne~f~f~v~~~--~~~l~i~V~d~~~~ 450 (726)
+.|.|++.+|++|..+|.+|.+||||++++ +..+++|+++ ++.||.|||.|.|.+... ...|.|+|||++..
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 489999999999999999999999999999 3458899999 999999999999997653 56799999999988
Q ss_pred -CCcceEEEEEEccccccCCeeeeeeeccccccce
Q 004872 451 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGE 484 (726)
Q Consensus 451 -~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 484 (726)
+|++||++.+++.++.... ...|+.|.....|+
T Consensus 252 ~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~~g~ 285 (674)
T 3pfq_A 252 SRNDFMGSLSFGISELQKAG-VDGWFKLLSQEEGE 285 (674)
T ss_dssp SCCEECCBCCCBTTHHHHCC-EEEEEECBCTTGGG
T ss_pred cccccccccccchhhhccCC-cccceeecccccce
Confidence 8999999999999997655 47999998755444
No 92
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.91 E-value=1.5e-08 Score=88.51 Aligned_cols=108 Identities=14% Similarity=0.232 Sum_probs=84.5
Q ss_pred ceEEEEEEEEeecCcccccCCCCccEEEEEECCeE----EEe-EeeeCCCCCeeeeEEEEecC-CCeEEEEEEECCCCCC
Q 004872 509 NGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLK----KRT-KVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNALLA 582 (726)
Q Consensus 509 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~----~kT-~v~~~t~nP~wne~~~f~v~-~~~l~i~V~d~d~~~~ 582 (726)
..-|||.+.++.--+-.......||||.|.+.... .+| ...++|..|+|||.|.-.+. ...|.|.||+...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~Gr~l~i~Vfh~a~--- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAE--- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTTCEEEEEEEEETT---
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCCEEEEEEEEcCCC---
Confidence 45677777666532222233468999999996643 255 66778999999999999985 7899999996443
Q ss_pred CCeeEEEEEEccccC-----CCCceeeEEecCCCCCeEEEEEEEE
Q 004872 583 SSSIGDCVVEYQRLP-----PNQMADKWIPLQGVRKGEIHVLITR 622 (726)
Q Consensus 583 d~~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~G~i~l~l~~ 622 (726)
+|++.|+|++.+|. .+...+.|++|++ .|.|++.++|
T Consensus 82 -~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~ 123 (126)
T 1yrk_A 82 -EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQY 123 (126)
T ss_dssp -EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEE
T ss_pred -CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEE
Confidence 79999999999986 4557789999996 8999999998
No 93
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.86 E-value=2.8e-08 Score=87.88 Aligned_cols=109 Identities=17% Similarity=0.275 Sum_probs=86.2
Q ss_pred CceEEEEEEEEeecCcccc-cCCCCccEEEEEECCe----EEEe-EeeeCCCCCeeeeEEEEecC-CCeEEEEEEECCCC
Q 004872 508 GNGWIELVIVEARDLVAAD-LRGTSDPYVKVQYGDL----KKRT-KVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNAL 580 (726)
Q Consensus 508 ~~g~L~v~v~~a~~L~~~d-~~g~~DPyv~v~~~~~----~~kT-~v~~~t~nP~wne~~~f~v~-~~~l~i~V~d~d~~ 580 (726)
..+-|||.+.++.--+-.. .....||||.|.+... ..+| ..+++|..|+|||.|.-.+. ...|.|.||+...
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKGRVMQIIVKGKNV- 86 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSSCEEEEEEECSSC-
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECCeEEEEEEEcCCC-
Confidence 3467888887766433221 2336899999999764 2577 66777999999999999985 7899999995433
Q ss_pred CCCCeeEEEEEEccccC-----CCCceeeEEecCCCCCeEEEEEEEE
Q 004872 581 LASSSIGDCVVEYQRLP-----PNQMADKWIPLQGVRKGEIHVLITR 622 (726)
Q Consensus 581 ~~d~~lG~~~i~l~~l~-----~~~~~~~w~~L~~~~~G~i~l~l~~ 622 (726)
+|++.|+|++.+|. .+...+.|++|+. .|.|++.++|
T Consensus 87 ---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~ 128 (138)
T 2enj_A 87 ---DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARY 128 (138)
T ss_dssp ---SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEE
Confidence 79999999999996 4557799999996 8999999998
No 94
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.73 E-value=2.4e-07 Score=80.88 Aligned_cols=107 Identities=10% Similarity=0.213 Sum_probs=82.7
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeE----eec-ccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCCCCc
Q 004872 380 KINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIV----QRT-RTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIFGDE 453 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~~~----~kT-~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~~d~ 453 (726)
-|+|.+.++.--..+......||||.|.++... .+| .++ +|..|.||+.|.-.+. ....|.|.|++... +
T Consensus 7 flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~ 82 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE---E 82 (126)
T ss_dssp EEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT---E
T ss_pred cEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC---C
Confidence 688888776632222223468999999995432 254 566 9999999999998854 45669999997653 8
Q ss_pred ceEEEEEEcccccc-----CCeeeeeeeccccccceeEEEEEEE
Q 004872 454 NMGSARVNLEGLVE-----GSVRDIWVPLEKVNTGELRLQIEAT 492 (726)
Q Consensus 454 ~iG~~~i~L~~l~~-----~~~~~~w~~L~~~~~G~I~l~~~~~ 492 (726)
+++.+.+.+.+|.. +...+.|+.|++ .|+|++.++|.
T Consensus 83 fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 83 PVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp EEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred eeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 99999999999983 346689999997 79999999886
No 95
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.70 E-value=5.4e-08 Score=114.04 Aligned_cols=105 Identities=24% Similarity=0.320 Sum_probs=84.3
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-C-CCCCceee-EEEEE-eeCC-ceeEEEEEEee
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-H-SPNHVWNQ-KFELD-EIGG-GECLMVKCYNE 447 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~------~~~kT~~~-~-t~nP~wne-~f~f~-v~~~-~~~l~i~V~d~ 447 (726)
..|.|+|++|++|+.+ .+||||+|.+.+ .++||+++ + +.||+||| +|.|. +..+ -..|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 3799999999999853 589999999932 35899999 5 59999999 69998 5444 56899999998
Q ss_pred cCCCCcceEEEEEEccccccCCeeeeeeeccccc-----cceeEEEEEEEE
Q 004872 448 EIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEATR 493 (726)
Q Consensus 448 ~~~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~I~l~~~~~~ 493 (726)
+ +++||++.++|..|..+ .++++|.+.. .|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~G---yR~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSG---YHYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCC---ceEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 78999999999998654 3567776542 477888887774
No 96
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.69 E-value=6.5e-08 Score=113.42 Aligned_cols=104 Identities=22% Similarity=0.332 Sum_probs=81.4
Q ss_pred ccEEEEEEEEeecCCCCCCCCCCCcEEEEEE-C---C--eEeecc-cc--CCCCCceee-EEEE-EeeCC-ceeEEEEEE
Q 004872 378 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQY-G---K--IVQRTR-TA--HSPNHVWNQ-KFEL-DEIGG-GECLMVKCY 445 (726)
Q Consensus 378 ~~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l-g---~--~~~kT~-~~--~t~nP~wne-~f~f-~v~~~-~~~l~i~V~ 445 (726)
.+.|.|+|++|++|+. +.+||||+|.+ | . .++||+ ++ ++.||+||| +|.| .+..+ -..|.|.||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4589999999999985 46899999999 4 1 368999 77 569999999 6999 66544 458999999
Q ss_pred eecCCCCcceEEEEEEccccccCCeeeeeeecccccc-----ceeEEEEEE
Q 004872 446 NEEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVNT-----GELRLQIEA 491 (726)
Q Consensus 446 d~~~~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~-----G~I~l~~~~ 491 (726)
|++ +++||++.++|..|..+ .+|++|.+... +.|.+.+.+
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EeC---CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEE
Confidence 986 78999999999999653 46788866432 445555544
No 97
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.69 E-value=9.1e-08 Score=111.54 Aligned_cols=105 Identities=17% Similarity=0.252 Sum_probs=84.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eEeecccc-C-CCCCceeeE-EEEE-eeCC-ceeEEEEEEe
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-------IVQRTRTA-H-SPNHVWNQK-FELD-EIGG-GECLMVKCYN 446 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~lg~-------~~~kT~~~-~-t~nP~wne~-f~f~-v~~~-~~~l~i~V~d 446 (726)
+.|.|+|++|++|+.+ .+||||+|.+.+ .++||+++ + +.||+|||+ |.|. +..+ -..|+|.|||
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 4899999999999753 689999999932 57899998 4 699999998 9998 6544 4689999999
Q ss_pred ecCCCCcceEEEEEEccccccCCeeeeeeeccccc-----cceeEEEEEEEE
Q 004872 447 EEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEATR 493 (726)
Q Consensus 447 ~~~~~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~I~l~~~~~~ 493 (726)
++ +++||++.++|..|..+ .++++|.+.. .+.|.+.+....
T Consensus 726 ~d---ddfiG~~~ipL~~L~~G---yR~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 726 EN---GKFIGHRVMPLDGIKPG---YRHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp TT---SCEEEEEEEESTTCCCE---EEEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred cC---CCeeeEEEEEHHHcCCc---ceEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 85 78999999999999764 3567887643 256666666653
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.59 E-value=3.9e-07 Score=80.62 Aligned_cols=107 Identities=12% Similarity=0.217 Sum_probs=83.3
Q ss_pred EEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe-E---eec-ccc-CCCCCceeeEEEEEeeCCceeEEEEEEeecCCCC
Q 004872 380 KINVTVVEGKDLMPKD-KSGKCDPYVKLQYGKI-V---QRT-RTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIFGD 452 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d-~~g~~dpyv~v~lg~~-~---~kT-~~~-~t~nP~wne~f~f~v~~~~~~l~i~V~d~~~~~d 452 (726)
-|+|.+.++.--+... .....||||.|.++.. . .+| .++ +|..|.||+.|.-.+. ....|.|.|++.. .
T Consensus 11 flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a---~ 86 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKN---V 86 (138)
T ss_dssp CEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSS---C
T ss_pred ceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCC---C
Confidence 6888887776433322 2346899999999543 3 566 556 8999999999998854 4566999999665 3
Q ss_pred cceEEEEEEcccccc-----CCeeeeeeeccccccceeEEEEEEE
Q 004872 453 ENMGSARVNLEGLVE-----GSVRDIWVPLEKVNTGELRLQIEAT 492 (726)
Q Consensus 453 ~~iG~~~i~L~~l~~-----~~~~~~w~~L~~~~~G~I~l~~~~~ 492 (726)
++++.+.+.+.+|.. +...+.|+.|++ .|+|++.++|.
T Consensus 87 ~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~ 129 (138)
T 2enj_A 87 DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYF 129 (138)
T ss_dssp SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEEC
T ss_pred CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEE
Confidence 899999999999984 346689999997 79999999986
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=93.44 E-value=0.74 Score=41.94 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=84.8
Q ss_pred CCCCCceEEEEEEEEeecCcccc-cCCCCccEEEEEEC---CeEEEeEeeeCCCCCeeeeEEEEecC----------CCe
Q 004872 504 NIGSGNGWIELVIVEARDLVAAD-LRGTSDPYVKVQYG---DLKKRTKVIFKTLNPQWHQTLEFPDD----------GSP 569 (726)
Q Consensus 504 ~~~~~~g~L~v~v~~a~~L~~~d-~~g~~DPyv~v~~~---~~~~kT~v~~~t~nP~wne~~~f~v~----------~~~ 569 (726)
...+..+.+.++|.++.=-+..- ..+..+|+.-+.+. -+...|.++. ..+|.+|-+..|.|. ...
T Consensus 12 ~l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~ 90 (156)
T 2yrb_A 12 HLERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNT 90 (156)
T ss_dssp SCCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCC
T ss_pred hccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCC
Confidence 34577799999999998433221 13455776666663 3566666665 789999999888873 458
Q ss_pred EEEEEEECCCCCCCCeeEEEEEEccccCCCCc-eeeEEecCC-----CCCeEEEEEEEEEecCc
Q 004872 570 LTLHVRDHNALLASSSIGDCVVEYQRLPPNQM-ADKWIPLQG-----VRKGEIHVLITRKVPEL 627 (726)
Q Consensus 570 l~i~V~d~d~~~~d~~lG~~~i~l~~l~~~~~-~~~w~~L~~-----~~~G~i~l~l~~~~p~~ 627 (726)
+.+++..... +.-+.||.+.|+|.++...+. ...-.+|.+ ..-|.|.+.++++.|-.
T Consensus 91 l~lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi~ 153 (156)
T 2yrb_A 91 ITLEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRVSGP 153 (156)
T ss_dssp EEEEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEECCC
T ss_pred EEEEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEecccC
Confidence 9999987643 345699999999999864332 344456653 24599999999877643
No 100
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=89.25 E-value=3.6 Score=39.65 Aligned_cols=55 Identities=16% Similarity=0.178 Sum_probs=42.1
Q ss_pred EEeeeecCCCCCCcccceeEEEEecC---CceEEEEEEEeCCCCCC---cceeEEEEEece
Q 004872 240 LTRRTDARPGSDPRWDSMFNMVLHEE---TGTVRFNLYECIPGHVK---YDYLTSCEVKMK 294 (726)
Q Consensus 240 ~~rTt~i~~t~nP~WnEtf~~~v~~~---~~~L~~~V~D~d~~~~~---dd~lG~~~i~L~ 294 (726)
..+|.+...+.+|.|+|++-+.+... ..-|.|.+++......+ +..+|.+.+||-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 46777888999999999999998654 45899999987643122 247899999883
No 101
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=85.25 E-value=3.4 Score=48.87 Aligned_cols=86 Identities=16% Similarity=0.143 Sum_probs=61.8
Q ss_pred ceEEEEEEEEeecCcccccCCCCccEEEEEE--CCe----EEEeEeeeCCCCCeeeeEEEEec------CCCeEEEEEEE
Q 004872 509 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKVIFKTLNPQWHQTLEFPD------DGSPLTLHVRD 576 (726)
Q Consensus 509 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~v~~~t~nP~wne~~~f~v------~~~~l~i~V~d 576 (726)
...++|+|..+.++... ...+-||.+.+ |++ ...|..+.-..+|.|||.+.|++ .+..|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46899999999998754 35688888776 553 34566566577899999999986 26889999998
Q ss_pred CCCC--C----------CCCeeEEEEEEccccC
Q 004872 577 HNAL--L----------ASSSIGDCVVEYQRLP 597 (726)
Q Consensus 577 ~d~~--~----------~d~~lG~~~i~l~~l~ 597 (726)
...- + .+..||.+.++|-+..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 6431 1 2458999999987643
No 102
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=82.20 E-value=13 Score=33.77 Aligned_cols=112 Identities=11% Similarity=0.084 Sum_probs=71.8
Q ss_pred EEEEEEEEeecCCCCC--CCCCCCc--EEEEEE-CCeEeeccccCCCCCceeeEEEEEeeCC--------ceeEEEEEEe
Q 004872 380 KINVTVVEGKDLMPKD--KSGKCDP--YVKLQY-GKIVQRTRTAHSPNHVWNQKFELDEIGG--------GECLMVKCYN 446 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d--~~g~~dp--yv~v~l-g~~~~kT~~~~t~nP~wne~f~f~v~~~--------~~~l~i~V~d 446 (726)
.+.+.|.++. +.+.. ..+..+| ||.+.+ +-+.+.|.+....+|.||-+-.|.+..+ ...+.+++..
T Consensus 19 lfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhq 97 (156)
T 2yrb_A 19 LFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQ 97 (156)
T ss_dssp EEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEE
T ss_pred EEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEE
Confidence 6777777765 21100 0122344 555555 5567777766888999999988887543 3578999988
Q ss_pred ecCCCCcceEEEEEEccccccCCe-eeeeeecccc-----ccceeEEEEEEE
Q 004872 447 EEIFGDENMGSARVNLEGLVEGSV-RDIWVPLEKV-----NTGELRLQIEAT 492 (726)
Q Consensus 447 ~~~~~d~~iG~~~i~L~~l~~~~~-~~~w~~L~~~-----~~G~I~l~~~~~ 492 (726)
.....-..||.+.|+|.++.+... .....+|.+. .-|.|...+++.
T Consensus 98 a~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~ 149 (156)
T 2yrb_A 98 AYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLR 149 (156)
T ss_dssp ECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEE
T ss_pred eeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEe
Confidence 765456789999999999986542 2233355442 235666666554
No 103
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=81.67 E-value=17 Score=35.00 Aligned_cols=52 Identities=10% Similarity=0.004 Sum_probs=38.4
Q ss_pred Eeecccc-CCCCCceeeEEEEEeeCC---ceeEEEEEEeecCC-----CCcceEEEEEEcc
Q 004872 412 VQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-----GDENMGSARVNLE 463 (726)
Q Consensus 412 ~~kT~~~-~t~nP~wne~f~f~v~~~---~~~l~i~V~d~~~~-----~d~~iG~~~i~L~ 463 (726)
.++|.+. ++.+|.|+|++.+.+... ...|.|.+++.... .+..+|-+.++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 6788888 999999999999997763 67899998875432 2235666666554
No 104
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=80.39 E-value=3.5 Score=48.79 Aligned_cols=86 Identities=12% Similarity=0.220 Sum_probs=56.8
Q ss_pred cccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEE--cc-----EEeeeecCCCCCCcccc
Q 004872 184 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL--EE-----LTRRTDARPGSDPRWDS 256 (726)
Q Consensus 184 ~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~--g~-----~~rTt~i~~t~nP~WnE 256 (726)
...-++|+|.++.++...+. .+=||++.+ |. ...|+.+.-..+|.|||
T Consensus 215 ~~~~f~i~i~~~~~~~~~~~-------------------------~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne 269 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNADER-------------------------MKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQ 269 (940)
T ss_dssp CCSEEEEEEEEEECCCC----------------------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEE
T ss_pred cCCceEEEEEEecccCCCCC-------------------------ceEEEEEEEEECCEEccCceecccccCCCCcccce
Confidence 34679999999999875421 155888777 42 22333344467899999
Q ss_pred eeEEEEe--cC--CceEEEEEEEeCCC--C-------C--CcceeEEEEEece
Q 004872 257 MFNMVLH--EE--TGTVRFNLYECIPG--H-------V--KYDYLTSCEVKMK 294 (726)
Q Consensus 257 tf~~~v~--~~--~~~L~~~V~D~d~~--~-------~--~dd~lG~~~i~L~ 294 (726)
.+.|.+. +. +..|.|.||+.... + . .+..||-+.++|=
T Consensus 270 ~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lF 322 (940)
T 2wxf_A 270 RLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLF 322 (940)
T ss_dssp EEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESB
T ss_pred EEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEE
Confidence 9888753 44 67999999997431 0 0 1348888888873
No 105
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=73.97 E-value=9.3 Score=45.67 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=60.6
Q ss_pred ceEEEEEEEEeecCcccccCCCCccEEEEEE--CCe----EEEeEeeeCCCCCeeeeEEEEec------CCCeEEEEEEE
Q 004872 509 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKVIFKTLNPQWHQTLEFPD------DGSPLTLHVRD 576 (726)
Q Consensus 509 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~v~~~t~nP~wne~~~f~v------~~~~l~i~V~d 576 (726)
...++|+|..+.++.... ....+-||++.+ |++ ..+|+.+. ..+|.|||.+.|++ ....|-|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 367899999999886432 335678999887 443 33444333 45788999999987 26889999998
Q ss_pred CCCC----CCCCeeEEEEEEccccC
Q 004872 577 HNAL----LASSSIGDCVVEYQRLP 597 (726)
Q Consensus 577 ~d~~----~~d~~lG~~~i~l~~l~ 597 (726)
.... ..+..||.+.++|-+..
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT
T ss_pred ecCccCcccccceeEEeeeeeEccC
Confidence 6642 12457999999987653
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=68.84 E-value=18 Score=42.81 Aligned_cols=87 Identities=16% Similarity=0.045 Sum_probs=55.8
Q ss_pred eEEEEEEEEeecCcccccCCCCccEEEEEE--CCeE---EEeEeeeCCCCCeeeeEEEEec------CCCeEEEEEEECC
Q 004872 510 GWIELVIVEARDLVAADLRGTSDPYVKVQY--GDLK---KRTKVIFKTLNPQWHQTLEFPD------DGSPLTLHVRDHN 578 (726)
Q Consensus 510 g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~~---~kT~v~~~t~nP~wne~~~f~v------~~~~l~i~V~d~d 578 (726)
..++|.|..+...... .+..++-||++.+ |++. .+|..+.-+.+|.|||-+.|++ .+..|.|+||+..
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4677777777542111 1235677888765 6542 3454444466899999999986 2688999999754
Q ss_pred CC----------------CCCCeeEEEEEEccccC
Q 004872 579 AL----------------LASSSIGDCVVEYQRLP 597 (726)
Q Consensus 579 ~~----------------~~d~~lG~~~i~l~~l~ 597 (726)
.- +++..||.+.++|-+..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp C--------------------CEEEEEEEESBCTT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCC
Confidence 22 13458999999987653
No 107
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=64.74 E-value=26 Score=41.85 Aligned_cols=100 Identities=14% Similarity=0.134 Sum_probs=67.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeccccCCCCCceeeEEEEEeeC----CceeEEEEEEeec
Q 004872 379 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI----VQRTRTAHSPNHVWNQKFELDEIG----GGECLMVKCYNEE 448 (726)
Q Consensus 379 ~~L~V~V~~a~~L~~~d~~g~~dpyv~v~l--g~~----~~kT~~~~t~nP~wne~f~f~v~~----~~~~l~i~V~d~~ 448 (726)
..+.|+|..+.++... .....+-||++.+ |++ ..+|+.+...+|.|||..+|.+.- ....|.|.||+..
T Consensus 355 ~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~ 433 (1091)
T 3hhm_A 355 SALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 433 (1091)
T ss_dssp SEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCC
T ss_pred CCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccCCCCCCCCeeEEecCccccCChhcEEEEEEEEec
Confidence 3799999999988542 2335677888877 543 345555544578899999998643 3789999999865
Q ss_pred CC-----CCcceEEEEEEccccccCCeeeeeeeccccccceeEEEEE
Q 004872 449 IF-----GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQIE 490 (726)
Q Consensus 449 ~~-----~d~~iG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I~l~~~ 490 (726)
.. ....||.+.++|-+.... | .+|+..+.+.
T Consensus 434 ~~~~~~~~~~~lg~~n~~lfd~~~~--------L---~~G~~~L~lW 469 (1091)
T 3hhm_A 434 GRKGAKEEHCPLAWGNINLFDYTDT--------L---VSGKMALNLW 469 (1091)
T ss_dssp CCC-------CCEEEEEESBCTTCB--------B---CCEEEEEECE
T ss_pred CccCcccccceeEEeeeeeEccCCe--------E---EcCCeEEEee
Confidence 42 235789999988875311 1 2477777774
No 108
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=64.03 E-value=5.2 Score=47.99 Aligned_cols=69 Identities=12% Similarity=0.262 Sum_probs=47.3
Q ss_pred cccEEEEEEEeecCCCCCCCCCCCcccccccCCCCccccccCCCCcCcEEEEEE--cc-----EEeeeecCCCCCCcccc
Q 004872 184 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL--EE-----LTRRTDARPGSDPRWDS 256 (726)
Q Consensus 184 ~~GvL~V~v~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~k~~DPyV~v~~--g~-----~~rTt~i~~t~nP~WnE 256 (726)
...-++|+|.++.++...+. .+=||++.+ |. ...|+.+.-..+|.|||
T Consensus 351 ~~~~f~i~i~~~~~~~~~~~-------------------------~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wne 405 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTEET-------------------------VKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNE 405 (1092)
T ss_dssp CCSEEEEEECCCCCCCCCSS-------------------------CCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCE
T ss_pred cCCCEEEEEEEeccCCCCCC-------------------------ceEEEEEEEEECCEEccCceecccccCCCCCccce
Confidence 44789999999999875421 145776655 42 12343344477899999
Q ss_pred eeEEEE--ecC--CceEEEEEEEeC
Q 004872 257 MFNMVL--HEE--TGTVRFNLYECI 277 (726)
Q Consensus 257 tf~~~v--~~~--~~~L~~~V~D~d 277 (726)
.+.|.+ .+. +..|.|.||+..
T Consensus 406 wl~f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 406 QLEFDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEEEEESSSCCTTCEEEEECCCC-
T ss_pred eEEeCCccccCChhcEEEEEEEEec
Confidence 888775 344 679999999864
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=55.11 E-value=6.4 Score=47.23 Aligned_cols=85 Identities=15% Similarity=0.092 Sum_probs=57.8
Q ss_pred ceEEEEEEEEeecCcccccCCCCccEEEEEE--CCeE----EEeEeeeCCCCCeeeeEEEEec------CCCeEEEEEEE
Q 004872 509 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDLK----KRTKVIFKTLNPQWHQTLEFPD------DGSPLTLHVRD 576 (726)
Q Consensus 509 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~~----~kT~v~~~t~nP~wne~~~f~v------~~~~l~i~V~d 576 (726)
...++|+|..+.++... ...+-||.+.+ |++. ..|..+.-..+|.|||-+.|++ .+..|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999999998754 35678887555 6543 3455555577899999999986 26889999998
Q ss_pred CCCC----------------------CCCCeeEEEEEEcccc
Q 004872 577 HNAL----------------------LASSSIGDCVVEYQRL 596 (726)
Q Consensus 577 ~d~~----------------------~~d~~lG~~~i~l~~l 596 (726)
.... +.+..+|.+.++|-+.
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 470 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDF 470 (1092)
T ss_dssp C------------------------------CCEEEEESBCT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECC
Confidence 6311 1123788888887654
No 110
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=48.53 E-value=68 Score=38.00 Aligned_cols=85 Identities=15% Similarity=0.123 Sum_probs=55.5
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---Eeecccc-CCCCCceeeEEEEEeeC----CceeEEEEEEeecC
Q 004872 380 KINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI---VQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEI 449 (726)
Q Consensus 380 ~L~V~V~~a~~L~~~d~~g~~dpyv~v~l--g~~---~~kT~~~-~t~nP~wne~f~f~v~~----~~~~l~i~V~d~~~ 449 (726)
.+.|.|..+....... +...+-||++.+ |++ ..+|..+ -+.+|.|||.+.|.+.- ....|.|.+|+...
T Consensus 219 ~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 297 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAK 297 (961)
T ss_dssp EEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC
T ss_pred ceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEeccc
Confidence 7899999887522111 234577887766 654 2345555 67789999999998643 37889999997532
Q ss_pred C-----------------CCcceEEEEEEcccc
Q 004872 450 F-----------------GDENMGSARVNLEGL 465 (726)
Q Consensus 450 ~-----------------~d~~iG~~~i~L~~l 465 (726)
. ....+|.+.++|-+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 298 PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp --------------------CEEEEEEEESBCT
T ss_pred CccccccccccccccccccceeEEEEeeeeecC
Confidence 1 234677777777664
No 111
>2cb2_A Sulfur oxygenase reductase; oxidoreductase, mononuclear non-heme iron, biogeochemical sulfur cycle, extremophIle, thermophilic, acidophilic; 1.7A {Acidianus ambivalens} SCOP: d.58.4.17 PDB: 2yav_A 2yaw_A 2yax_A* 2yax_B* 3bxv_A
Probab=23.46 E-value=78 Score=31.13 Aligned_cols=42 Identities=21% Similarity=0.306 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHHHHhhcCCcccceEEEeEE--------------------eeCCCCccccee
Q 004872 9 NPKLSIRFSQIVEKRLKHRKPRLIEKIELQEF--------------------SLGSTSPCLGLH 52 (726)
Q Consensus 9 ~~~~s~~~~~~ve~~l~~~~P~~i~~~~~~~f--------------------~lG~~pp~i~~v 52 (726)
|.+..+.+.+.+| .|+ +.|+||...=++++ |+|..||.=...
T Consensus 173 EKeFEe~~~~tLe-~lk-~apGflG~MIlKeIGvs~iGSfql~~~g~~~~l~t~g~~pP~~~~~ 234 (318)
T 2cb2_A 173 EKQFEDAIVRTLE-MLK-KAPGFLGAMVLKEIGVSGIGSMQFGAKGFHQVLENPGSLEPDPNNV 234 (318)
T ss_dssp HHHHHHHHHHHHH-HHT-TSTTEEEEEEEEEEEECTTTTTCCCHHHHHHHHTCCSSSCCCGGGC
T ss_pred HHHHHHHHHHHHH-HHh-cCCCcchhHHHHHhccccccccccCchHHHHHhhhccCCCCCcccc
Confidence 6667777777777 666 78999999999999 899999987665
Done!