Query 004874
Match_columns 726
No_of_seqs 399 out of 2235
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 08:29:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004874.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/004874hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uyla_ d.122.1.1 (A:) HSP90 { 99.9 4.7E-28 3.4E-32 240.9 12.0 167 241-416 11-204 (208)
2 d2iwxa1 d.122.1.1 (A:2-214) HS 99.9 8.5E-28 6.2E-32 239.9 11.8 172 236-416 6-206 (213)
3 d2gqpa1 d.122.1.1 (A:74-337) H 99.9 2.6E-27 1.9E-31 238.4 10.3 169 237-416 5-208 (227)
4 d1b63a2 d.122.1.2 (A:-2-216) D 99.4 9.1E-14 6.6E-18 137.8 10.6 142 233-387 2-150 (218)
5 d1h7sa2 d.122.1.2 (A:29-231) D 99.4 4.5E-13 3.3E-17 131.0 9.4 124 252-387 4-132 (203)
6 d2hkja3 d.122.1.2 (A:10-228) T 99.2 8.5E-11 6.2E-15 115.4 13.3 98 254-355 22-129 (219)
7 d1bxda_ d.122.1.3 (A:) Histidi 98.0 5E-06 3.6E-10 77.3 7.8 87 255-351 48-138 (161)
8 d1gkza2 d.122.1.4 (A:186-378) 97.7 3.3E-05 2.4E-09 72.6 7.6 58 255-318 54-121 (193)
9 d1id0a_ d.122.1.3 (A:) Histidi 97.7 4.1E-05 3E-09 69.9 7.9 82 255-348 45-130 (146)
10 d1kija2 d.122.1.2 (A:9-220) DN 97.6 8.5E-05 6.2E-09 72.2 9.3 122 254-389 26-165 (212)
11 d1ysra1 d.122.1.3 (A:299-446) 97.6 5.4E-05 3.9E-09 69.1 7.4 84 255-349 45-133 (148)
12 d1jm6a2 d.122.1.4 (A:1177-1366 97.6 5.2E-05 3.8E-09 71.9 7.5 90 255-350 61-166 (190)
13 d2c2aa2 d.122.1.3 (A:321-481) 97.5 6.4E-05 4.7E-09 69.3 6.5 88 255-350 50-146 (161)
14 d1ei1a2 d.122.1.2 (A:2-220) DN 97.4 0.0001 7.4E-09 72.2 7.7 142 233-390 14-172 (219)
15 d1y8oa2 d.122.1.4 (A:177-301) 97.4 0.0001 7.3E-09 63.2 6.2 50 256-311 66-125 (125)
16 d1pvga2 d.122.1.2 (A:7-245) DN 97.3 0.00027 2E-08 69.9 9.5 125 255-390 54-197 (239)
17 d1s14a_ d.122.1.2 (A:) Topoiso 97.0 0.00075 5.5E-08 63.6 8.7 107 256-389 7-121 (168)
18 d1ixma_ d.123.1.1 (A:) Sporula 96.7 0.00049 3.6E-08 60.6 4.2 59 254-316 97-159 (179)
19 d1th8a_ d.122.1.3 (A:) Anti-si 96.4 0.002 1.4E-07 57.7 6.1 81 255-350 40-126 (139)
20 d1r62a_ d.122.1.3 (A:) Nitroge 96.1 0.00043 3.2E-08 63.0 -0.1 87 255-350 45-143 (156)
21 d1we9a_ g.50.1.2 (A:) PHD fing 81.7 0.27 2E-05 38.0 1.8 34 614-647 18-54 (64)
22 d1weea_ g.50.1.2 (A:) PHD fing 76.8 0.71 5.1E-05 36.3 2.9 32 615-646 28-61 (72)
23 d1wepa_ g.50.1.2 (A:) PHD fing 70.6 0.61 4.4E-05 37.6 1.1 34 614-647 23-59 (79)
24 d1wema_ g.50.1.2 (A:) Death as 60.3 1.2 8.9E-05 35.0 1.0 32 615-646 27-65 (76)
25 d1mm2a_ g.50.1.2 (A:) Mi2-beta 40.9 7.7 0.00056 29.2 2.7 33 615-647 18-52 (61)
26 d1ow1a_ b.131.1.3 (A:) SMART/H 31.5 14 0.001 33.8 3.3 48 68-116 76-138 (170)
27 d1rlha_ d.256.1.1 (A:) Hypothe 24.9 13 0.00095 33.1 1.7 13 543-555 131-143 (151)
28 d1vgga_ d.256.1.1 (A:) Hypothe 22.0 14 0.001 33.4 1.3 38 543-591 123-160 (161)
No 1
>d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=4.7e-28 Score=240.88 Aligned_cols=167 Identities=24% Similarity=0.294 Sum_probs=132.4
Q ss_pred HHHHHHhhccccCCHHHHHHHHHHcccccCC----------------CccEEEEEEcccccCCCCcCEEEEEeCCCCCCH
Q 004874 241 PSYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTH 304 (726)
Q Consensus 241 pk~L~slstsh~~~pf~ALaELIDNA~DAgA----------------t~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~ 304 (726)
.+.|+.+..+.|+.+..+|||||+||.||.+ ....|.|.. + .+..+|+|.|||+||+.
T Consensus 11 ~~ll~ll~~slYs~~~iflRELIqNa~DA~~k~~~~~~~~~~~~~~~~~~~i~i~~--d----~~~~~l~I~DnGiGMt~ 84 (208)
T d1uyla_ 11 AQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIP--N----KQDRTLTIVDTGIGMTK 84 (208)
T ss_dssp HHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHHHHCGGGGTTCCCCCEEEEE--E----TTTTEEEEEECSCCCCH
T ss_pred HHHHHHHHHhhcCCchHhHHHHHhhHHHHHHHHHHHhcCCchhccCCcccceEEee--c----CCccEEEEEcCCccccH
Confidence 3467777889999999999999999999932 334455542 2 35789999999999999
Q ss_pred HhHHhhhh-cccCCC--------CCCCCCccccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecCCCceEEecCc
Q 004874 305 QDVVRMTY-FGHKQP--------DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIV 375 (726)
Q Consensus 305 eeL~~~l~-FG~S~K--------~~~d~~~IGqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~i~VPi~ 375 (726)
+++.+.|+ +|.|.+ ...+.+.||||||||||+|| ++++|.|.||+.+.....|.|.+ .+...+..+..
T Consensus 85 ~el~~~LgtIa~Sg~~~f~~~~~~~~~~~~IGqFGVGFyS~Fm-Vad~v~V~sk~~~~~~~~~~~~~--~~~~~~~~~~~ 161 (208)
T d1uyla_ 85 ADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYL-VAEKVTVITKHNDDEQYAWESSA--GGSFTVRTDTG 161 (208)
T ss_dssp HHHHTGGGSCHHHHHHHHHHHHHTTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--TTEEEEEECCS
T ss_pred HHHHhhcccccccchHHHHHhhhhccchhhhhhcccceEEeee-ccCceEEEEecCCcchheeeecc--CCCceEEeccc
Confidence 99999886 555532 23467899999999999999 99999999998887655555543 44445555555
Q ss_pred cCCCCCcEEEEEecCcc-chhhHHhHHH-HHhhCCCCchhHHH
Q 004874 376 SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGE 416 (726)
Q Consensus 376 ~~e~~GT~I~l~lk~~s-e~~~~~~Le~-I~KYSpF~s~pI~e 416 (726)
....+||+|+|+++++. +|+.++.|+. |+|||.|+++||..
T Consensus 162 ~~~~~GT~I~L~lk~d~~efl~~~~i~~likkys~fi~~PI~l 204 (208)
T d1uyla_ 162 EPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITL 204 (208)
T ss_dssp SCCSSEEEEEEEECGGGGGGGSHHHHHHHHHHHCTTCSSCEEE
T ss_pred ccCCCCcEEEEEeCCChHHHcCHHHHHHHHHHHhcccCcCeEe
Confidence 55679999999999876 7888888876 99999999999863
No 2
>d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=8.5e-28 Score=239.88 Aligned_cols=172 Identities=22% Similarity=0.273 Sum_probs=134.2
Q ss_pred eeecCH-HHHHHhhccccCCHHHHHHHHHHcccccCC----------------CccEEEEEEcccccCCCCcCEEEEEeC
Q 004874 236 FVRADP-SYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDD 298 (726)
Q Consensus 236 ~~~v~p-k~L~slstsh~~~pf~ALaELIDNA~DAgA----------------t~V~I~I~~~~d~~~~~~~~~L~I~DN 298 (726)
.|+++. +.|..++.+.|+.+..||||||+||+||.+ ..+.|.|.. + .+..+|+|.||
T Consensus 6 ~Fqae~~~ll~ll~~~lYs~~~iflRELiqNa~DA~~~~~~~~~~~~~~~~~~~~~~I~i~~--d----~~~~~l~i~Dn 79 (213)
T d2iwxa1 6 EFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITP--K----PEQKVLEIRDS 79 (213)
T ss_dssp ECCHHHHHHHHHHHHCCCSCTTHHHHHHHHHHHHHHHHHHHHTTTCGGGGTTSCCCCEEEEE--E----GGGTEEEEEEC
T ss_pred eehhhHHHHHHHHHHhhcCCchHHHHHHHHhHHHHHHHHHHhhccCcccccCCccccccccc--c----cccceeEEecC
Confidence 355664 578888999999999999999999999942 244455542 2 24689999999
Q ss_pred CCCCCHHhHHhhhh-cccCCCC--------CCCCCccccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecCCCce
Q 004874 299 GHGMTHQDVVRMTY-FGHKQPD--------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDN 369 (726)
Q Consensus 299 G~GMt~eeL~~~l~-FG~S~K~--------~~d~~~IGqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~ 369 (726)
|+||+.+++.+.|+ +|.|.+. ..+.++||||||||+|+|| +|++|.|.||+++.....+.|.. .+...
T Consensus 80 GiGMt~~~~~~~l~~ia~S~~~~~~~~~~~~~~~~~IGqFGIGfyS~Fm-vad~v~V~trs~~~~~~~~~~~~--~~~~~ 156 (213)
T d2iwxa1 80 GIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFL-VADRVQVISKSNDDEQYIWESNA--GGSFT 156 (213)
T ss_dssp SSCCCHHHHHHHHTTCCCSTHHHHHHHHHHTCCGGGGGGGTCGGGGGGG-TEEEEEEEEECTTSCCEEEEECS--SSEEE
T ss_pred CccccHHHHHHHHhhhhcccchHHHhhhhhhhhhhhhcccccchhhhhh-hccceeEEeecCCcccceeeEec--CCCcE
Confidence 99999999999875 7776542 2456899999999999999 99999999999887665555543 33333
Q ss_pred EEe-cCccCCCCCcEEEEEecCcc-chhhHHhHHH-HHhhCCCCchhHHH
Q 004874 370 LEI-PIVSYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGE 416 (726)
Q Consensus 370 i~V-Pi~~~e~~GT~I~l~lk~~s-e~~~~~~Le~-I~KYSpF~s~pI~e 416 (726)
+.. .......+||+|+||++++. +|+.++.|+. |+|||.|+.+||+.
T Consensus 157 ~~~~~~~~~~~~GT~I~L~lk~d~~efle~~rlk~iIkkYS~fI~~PI~l 206 (213)
T d2iwxa1 157 VTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQL 206 (213)
T ss_dssp EEECSSSCCCSSEEEEEEEECTTCGGGGCHHHHHHHHHHHCCCCSSCEEE
T ss_pred EEEEeccCCCCCcEEEEEEeCccHHHhcCHHHHHHHHHHHhcCcCcCeEE
Confidence 332 23334578999999999886 7888889966 99999999999874
No 3
>d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]}
Probab=99.94 E-value=2.6e-27 Score=238.36 Aligned_cols=169 Identities=20% Similarity=0.295 Sum_probs=130.5
Q ss_pred eecC-HHHHHHhhccccCCHHHHHHHHHHcccccCC----------------CccEEEEEEcccccCCCCcCEEEEEeCC
Q 004874 237 VRAD-PSYLQTLGQAHSGWIFGAIAELVDNSRDAKA----------------TKLEISIESIYFKKAGKDIPMLSIIDDG 299 (726)
Q Consensus 237 ~~v~-pk~L~slstsh~~~pf~ALaELIDNA~DAgA----------------t~V~I~I~~~~d~~~~~~~~~L~I~DNG 299 (726)
|+++ ...|..++.+.|+.+..||||||+||+||.. ..+.|.+.. +.+..+|+|.|||
T Consensus 5 Fq~e~~~ll~ll~~sLYs~~~iflRELiqNA~DA~~k~r~~~~~~~~~~~~~~~~~i~i~~------d~~~~~l~i~DnG 78 (227)
T d2gqpa1 5 FQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEELTVKIKC------DKEKNLLHVTDTG 78 (227)
T ss_dssp CCHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTCCCCCEEEEE------ETTTTEEEEEECS
T ss_pred eehhHHHHHHHHHhcccCCCchhHHHHHhhHHHHHHHHHHHhccCcccccccchhhhhccc------CCCCcEEEEEecC
Confidence 4455 4577777889999999999999999999931 234455442 1356899999999
Q ss_pred CCCCHHhHHhhhh-cccCCCC-------------CCCCCccccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecC
Q 004874 300 HGMTHQDVVRMTY-FGHKQPD-------------ADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQ 365 (726)
Q Consensus 300 ~GMt~eeL~~~l~-FG~S~K~-------------~~d~~~IGqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~e 365 (726)
+|||++++.++|+ +|.|... ..+...|||||+||+|+|| ++++|.|.||+.+. .++.|.+ +
T Consensus 79 iGMt~~e~~~~lgtIa~Sgt~~f~~~~~~~~~~~~~~~~~IGqFGvGfyS~Fm-Vad~V~v~s~~~~~--~~~~W~s--~ 153 (227)
T d2gqpa1 79 VGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSELIGQFGVGFYSAFL-VADKVIVTSKHNND--TQHIWES--D 153 (227)
T ss_dssp CCCCHHHHHHHHHCC---------------------CHHHHHHTTCGGGGGGG-TEEEEEEEEECTTS--CCEEEEE--S
T ss_pred ccccHHHHHHHHHHHhhcchHHHHHhhhhcccccccchhhhhhcCcceeEEEe-eeeeEEEEEeccCC--cccEEEe--c
Confidence 9999999999986 5555321 1234579999999999999 99999999998875 3567877 6
Q ss_pred CCceEEecCc--cCCCCCcEEEEEecCcc-chhhHHhHHH-HHhhCCCCchhHHH
Q 004874 366 GKDNLEIPIV--SYYRKGQFMELDTVVQS-EATAKYNLKS-IKEFSPFNKYLIGE 416 (726)
Q Consensus 366 G~~~i~VPi~--~~e~~GT~I~l~lk~~s-e~~~~~~Le~-I~KYSpF~s~pI~e 416 (726)
|.+.+++... ....+||+|+||++++. +|+.++.|+. |+|||.|+.+||..
T Consensus 154 g~~~~~i~~~~~~~~~rGT~I~L~Lk~d~~efl~~~rl~~iIkkYs~fI~~PI~l 208 (227)
T d2gqpa1 154 SNEFSVIADPRGNTLGRGTTITLVLKEEASDYLELDTIKNLVKKYSQFINFPIYV 208 (227)
T ss_dssp SSCEEEEECTTCSCSSSEEEEEEEECGGGGGGGCHHHHHHHHHHHHTTCSSCEEE
T ss_pred CCCceecccccccccccceEEEEEecccchhhcCHHHHHHHHHHHhcCCCCCeEe
Confidence 7777777554 34468999999999876 7888899976 99999999999874
No 4
>d1b63a2 d.122.1.2 (A:-2-216) DNA mismatch repair protein MutL {Escherichia coli [TaxId: 562]}
Probab=99.45 E-value=9.1e-14 Score=137.83 Aligned_cols=142 Identities=21% Similarity=0.251 Sum_probs=96.7
Q ss_pred CceeeecCHHHHHHh-hccccCCHHHHHHHHHHcccccCCCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhh
Q 004874 233 EKNFVRADPSYLQTL-GQAHSGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 311 (726)
Q Consensus 233 ~~~~~~v~pk~L~sl-stsh~~~pf~ALaELIDNA~DAgAt~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l 311 (726)
.|-+..+++...+.+ |.+.+.+|..+|+|||+||+||+|+.|.|.++. .+...|.|.|||.||+++|+..+.
T Consensus 2 ~m~I~~L~~~~~~~i~ag~vi~~~~~~vkELveNsiDA~At~I~V~i~~-------~g~~~i~V~DnG~Gi~~~d~~~~~ 74 (218)
T d1b63a2 2 HMPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIER-------GGAKLIRIRDNGCGIKKDELALAL 74 (218)
T ss_dssp CSCCCCCCHHHHHHHHHHHHCSSHHHHHHHHHHHHHHTTCSEEEEEEEG-------GGTSEEEEEECSCCCCGGGHHHHH
T ss_pred CCcceECCHHHHHHhCCcCEEecHHHHHHHHHhhhhcCCCCEEEEEEEc-------CCccEEEEeeCCCCcCHHHHHhhH
Confidence 355788999999999 566778999999999999999999999999872 356789999999999999998876
Q ss_pred hcccCCCCC--CCCCccccccceeee---ecccccCeEEEEEeeCCCcceEEEEeeecCCCceEE-ecCccCCCCCcEEE
Q 004874 312 YFGHKQPDA--DDPNRIGRFGVGFKT---GAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLE-IPIVSYYRKGQFME 385 (726)
Q Consensus 312 ~FG~S~K~~--~d~~~IGqFGvGFKS---A~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~i~-VPi~~~e~~GT~I~ 385 (726)
.-..++|-. .|...+..| ||.. +++.-..++.|.||+.+.. .++.-.. ..+..... -|. ....||.|+
T Consensus 75 ~r~~TSKi~~~~dl~~~~t~--GFRGEAL~Si~~vs~l~I~s~~~~~~-~~~~~~~-~~~~~~~~~~~~--~~~~GTtV~ 148 (218)
T d1b63a2 75 ARHATSKIASLDDLEAIISL--GFRGEALASISSVSRLTLTSRTAEQQ-EAWQAYA-EGRDMNVTVKPA--AHPVGTTLE 148 (218)
T ss_dssp STTCCSSCCSHHHHHTCCSS--CCSSCHHHHHHTTSEEEEEEECTTCS-SEEEEEE-ETTTTEEEEEEE--CCCSEEEEE
T ss_pred hccccccccchhhcchhhhh--ccchhHHHHhhhcCceEEeeecCCCC-ceEEEEE-Eeccccceeeec--ccCCccEEE
Confidence 533333321 122233333 4543 2334457899999998763 3332221 12222222 222 234799998
Q ss_pred EE
Q 004874 386 LD 387 (726)
Q Consensus 386 l~ 387 (726)
+.
T Consensus 149 V~ 150 (218)
T d1b63a2 149 VL 150 (218)
T ss_dssp EE
T ss_pred EE
Confidence 74
No 5
>d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=4.5e-13 Score=131.03 Aligned_cols=124 Identities=18% Similarity=0.226 Sum_probs=77.9
Q ss_pred cCCHHHHHHHHHHcccccCCCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhhcccCCCC--CCCC---Ccc
Q 004874 252 SGWIFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPD--ADDP---NRI 326 (726)
Q Consensus 252 ~~~pf~ALaELIDNA~DAgAt~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~FG~S~K~--~~d~---~~I 326 (726)
+.+|..||+|||+||+||+|+.|.|.+.. .+...|.|.|||.||+.++|..++.-..++|. ..+. ...
T Consensus 4 i~~~~~~v~ELi~NsiDA~At~I~i~i~~-------~g~~~i~V~DnG~Gi~~~dl~~~~~~~~tsk~~~~~~~~~~~t~ 76 (203)
T d1h7sa2 4 VLSLSTAVKELVENSLDAGATNIDLKLKD-------YGVDLIEVSDNGCGVEEENFEGLTLKHHTSKIQEFADLTQVETF 76 (203)
T ss_dssp ECCHHHHHHHHHHHHHHTTCSEEEEEEEG-------GGTSEEEEEECSCCCCGGGSGGGGC----------CCTTCSEEE
T ss_pred EecHHHHHHHHHHHHHcCCCCEEEEEEEc-------CCEEEEEEeeCCcccCHHHhhhhhhheeeccccccccccccccc
Confidence 46899999999999999999999999862 24678999999999999999877653333331 1222 333
Q ss_pred ccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecCCCceEEecCccCCCCCcEEEEE
Q 004874 327 GRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPIVSYYRKGQFMELD 387 (726)
Q Consensus 327 GqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~i~VPi~~~e~~GT~I~l~ 387 (726)
|.-|.++. ++....+++|.|++.+... ++.. .|..+..-..+ .+.-..+||.|++.
T Consensus 77 GfrGeaL~--si~~~s~~~i~s~~~~~~~-~~~i-~~~~~g~~~~~-~~~~~~~GTtV~v~ 132 (203)
T d1h7sa2 77 GFRGEALS--SLCALSDVTISTCHASAKV-GTRL-MFDHNGKIIQK-TPYPRPRGTTVSVQ 132 (203)
T ss_dssp SSSSSHHH--HHHHHSEEEEEEECTTCSS-CEEE-EECTTSCEEEE-EECCCCSEEEEEEE
T ss_pred Cccchhhh--hhhhccceEEEeecCCCch-hEEE-EEeccCceeee-eecccccceEEEee
Confidence 44444432 2334567999999888643 2322 23222222222 12223579999874
No 6
>d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=99.17 E-value=8.5e-11 Score=115.36 Aligned_cols=98 Identities=22% Similarity=0.356 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHcccccCCC-----ccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhh-cccCCCCCCCCCccc
Q 004874 254 WIFGAIAELVDNSRDAKAT-----KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIG 327 (726)
Q Consensus 254 ~pf~ALaELIDNA~DAgAt-----~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-FG~S~K~~~d~~~IG 327 (726)
.+..+|+|||+||+||.++ .+.|.|... + ...+...|.|.|||+||+++++.+++. |..+.+. ......|
T Consensus 22 ~L~~~l~eLi~Naida~~~~~~~~~i~i~i~~~-~--~~~~~~~i~V~DnG~Gi~~~~~~~~f~~~~~s~~~-~~~~~~G 97 (219)
T d2hkja3 22 ALYQTVRELIENSLDATDVHGILPNIKITIDLI-D--DARQIYKVNVVDNGIGIPPQEVPNAFGRVLYSSKY-VNRQTRG 97 (219)
T ss_dssp HHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEE-E--TTTTEEEEEEEECSCCCCGGGHHHHHHCCCSSCCC-CCSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcceEEEEEEEe-c--CCCCEEEEEEEcCCCCCCHHHHHhhccceEecccc-ccccccC
Confidence 4778999999999999763 455555532 1 123345789999999999999999985 6555432 3456789
Q ss_pred cccceeeeecc----cccCeEEEEEeeCCCcc
Q 004874 328 RFGVGFKTGAM----RLGKDALVLTQTADSRS 355 (726)
Q Consensus 328 qFGvGFKSA~m----rLG~~V~V~TK~~g~~s 355 (726)
.+|+|+.++.+ ..|..+.|.|+..+...
T Consensus 98 ~~GlGl~~~~~~s~~~~g~~i~V~S~~~~~~~ 129 (219)
T d2hkja3 98 MYGLGVKAAVLYSQMHQDKPIEIETSPVNSKR 129 (219)
T ss_dssp SCTTTHHHHHHHHHHHCCCCEEEEEECTTCSE
T ss_pred ccCHHHHHHHHHHHHcCCcEEEEEEEecCCCc
Confidence 99999987543 34667999999877543
No 7
>d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]}
Probab=98.00 E-value=5e-06 Score=77.29 Aligned_cols=87 Identities=17% Similarity=0.167 Sum_probs=62.0
Q ss_pred HHHHHHHHHHcccccCCCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhh-cccCCCCCCCCCcccccccee
Q 004874 255 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVGF 333 (726)
Q Consensus 255 pf~ALaELIDNA~DAgAt~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-FG~S~K~~~d~~~IGqFGvGF 333 (726)
+..+|..||+||+.+....|.|.+.. ..+.-.|+|.|||.||+++++.+++. |....+. ...+-.|+|+
T Consensus 48 l~~vl~NLi~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~e~~~~iF~~F~r~~~~----~~~~g~GLGL 117 (161)
T d1bxda_ 48 IKRAVANMVVNAARYGNGWIKVSSGT------EPNRAWFQVEDDGPGIAPEQRKHLFQPFVRGDSA----RTISGTGLGL 117 (161)
T ss_dssp HHHHHHHHHHHHHTTCCSCEEEEEEE------ETTEEEEEEEEESSCSCTTGGGCSSCCCCCCSCC----CCCCCCSCCC
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEEEE------eCCEEEEEEEEcCCCCCHHHHHHHhCCceECCCC----CcCCCCCchH
Confidence 34689999999999988888888763 23456899999999999999999886 4332221 1234579998
Q ss_pred eeec---ccccCeEEEEEeeC
Q 004874 334 KTGA---MRLGKDALVLTQTA 351 (726)
Q Consensus 334 KSA~---mrLG~~V~V~TK~~ 351 (726)
.-+- -..|.++.|.+...
T Consensus 118 ~ivk~iv~~hgG~i~v~s~~~ 138 (161)
T d1bxda_ 118 AIVQRIVDNHNGMLELGTSER 138 (161)
T ss_dssp CTTHHHHHHHTSEEEEEEETT
T ss_pred HHHHHHHHHCCCEEEEEEcCC
Confidence 6432 24577788777543
No 8
>d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=97.67 E-value=3.3e-05 Score=72.59 Aligned_cols=58 Identities=22% Similarity=0.343 Sum_probs=44.0
Q ss_pred HHHHHHHHHHcccccC----------CCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhhcccCCC
Q 004874 255 IFGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQP 318 (726)
Q Consensus 255 pf~ALaELIDNA~DAg----------At~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~FG~S~K 318 (726)
+..+|..||+||++|. ...|.|.+.. ..+.-.|.|.|||.||+++++.+++...++.+
T Consensus 54 l~qvl~NLl~NAi~~t~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~iF~~f~tt~ 121 (193)
T d1gkza2 54 LDYILPELLKNAMRATMESHLDTPYNVPDVVITIAN------NDVDLIIRISDRGGGIAHKDLDRVMDYHFTTA 121 (193)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCTTSCCCEEEEEEE------CSSEEEEEEECCSCCCCTTTTTTTTSTTCCCC
T ss_pred HHHHHHHHHHHHHHhcccCceeeccccceEEEEEEc------cCCEEEEEEecCCCCCCHHHHHHhcCCceecc
Confidence 4578999999999982 2356666653 23467889999999999999999987555443
No 9
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=97.67 E-value=4.1e-05 Score=69.87 Aligned_cols=82 Identities=15% Similarity=0.116 Sum_probs=56.8
Q ss_pred HHHHHHHHHHcccccCCCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhh-cccCCCCCCCCCcccccccee
Q 004874 255 IFGAIAELVDNSRDAKATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVGF 333 (726)
Q Consensus 255 pf~ALaELIDNA~DAgAt~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-FG~S~K~~~d~~~IGqFGvGF 333 (726)
+..+|..||+||+.+....+.|.+.. .++.-.|+|.|||.||+++++.+++. |-...+. . +-.|+|+
T Consensus 45 l~~vl~NLl~NAik~~~~~i~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~iF~~F~r~~~~---~---~G~GLGL 112 (146)
T d1id0a_ 45 FVEVMGNVLDNACKYCLEFVEISARQ------TDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTL---R---PGQGVGL 112 (146)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEEEE------CSSCEEEEEEESSSCCCGGGTTGGGSCCCCTTCC---C---TTCCSCH
T ss_pred HHHHHHHHHHHHHHhhcCCEEEEEEe------eCCEEEEEEEeeCCCCCHHHHHHHcCCcccCCCC---C---CCeeHHH
Confidence 55789999999999998888888764 23456899999999999999999986 4322211 1 2358887
Q ss_pred eeec---ccccCeEEEEE
Q 004874 334 KTGA---MRLGKDALVLT 348 (726)
Q Consensus 334 KSA~---mrLG~~V~V~T 348 (726)
.-+- -+.|.++.|.+
T Consensus 113 ~I~k~iv~~h~G~i~~~s 130 (146)
T d1id0a_ 113 AVAREITEQYEGKIVAGE 130 (146)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCEEEEEE
Confidence 5321 13355555544
No 10
>d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]}
Probab=97.58 E-value=8.5e-05 Score=72.17 Aligned_cols=122 Identities=15% Similarity=0.140 Sum_probs=74.7
Q ss_pred CHHHHHHHHHHcccccC----CCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHH--------hhhh-cccCCC--
Q 004874 254 WIFGAIAELVDNSRDAK----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV--------RMTY-FGHKQP-- 318 (726)
Q Consensus 254 ~pf~ALaELIDNA~DAg----At~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~--------~~l~-FG~S~K-- 318 (726)
-+.-.+-|+|+||+|.. ++.+.|.+. ....++|.|||.||+-+.-. -+++ +..+.+
T Consensus 26 Gl~~l~~Eil~Na~De~~~~~~~~i~v~~~---------~dg~i~V~ddG~GIpv~~h~~~~~~~~e~if~~l~~~~~~d 96 (212)
T d1kija2 26 GYHHLFKEILDNAVDEALAGYATEILVRLN---------EDGSLTVEDNGRGIPVDLMPEEGKPAVEVIYNTLHSGGKFE 96 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCEEEEEEC---------TTSCEEEEECSSCCCCSEETTTTEEHHHHHHHSSCEESGGG
T ss_pred chhhhhhhhhhhhhhhhhhcCCceEEEEEc---------CCCcEEEEECCcccccccccccCcceEEEEEEEEccccccc
Confidence 35677999999999973 455655543 13579999999999875311 1122 112222
Q ss_pred CCCCCCccccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecCCCceEEe--c-CccCCCCCcEEEEEec
Q 004874 319 DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEI--P-IVSYYRKGQFMELDTV 389 (726)
Q Consensus 319 ~~~d~~~IGqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~i~V--P-i~~~e~~GT~I~l~lk 389 (726)
........|..|+|.+.+-. ++..+.|.+++.+. ...++|..|...-.+ + .......||+|+..+.
T Consensus 97 ~~~~~~sgG~hGvGa~vvNa-lS~~~~v~v~r~~k----~~~~~f~~g~~~~~~~~~~~~~~~~~GT~ItF~PD 165 (212)
T d1kija2 97 QGAYKVSGGLHGVGASVVNA-LSEWTVVEVFREGK----HHRIAFSRGEVTEPLRVVGEAPRGKTGTRVTFKPD 165 (212)
T ss_dssp GSSCCCCSCSSTTSHHHHHH-TEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECGGGCCEEEEEEEEC
T ss_pred CCCceecCCCccccceEEEE-eccceEEEEEEecc----eeeeEEeccccCCcceEccccCCCCccEEEEEEEc
Confidence 11235677999999965444 88999999988774 233444444222112 1 1222356899886654
No 11
>d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.58 E-value=5.4e-05 Score=69.09 Aligned_cols=84 Identities=19% Similarity=0.179 Sum_probs=51.9
Q ss_pred HHHHHHHHHHcccccC-CCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhh-cccCCCCCCCCCccccccce
Q 004874 255 IFGAIAELVDNSRDAK-ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGRFGVG 332 (726)
Q Consensus 255 pf~ALaELIDNA~DAg-At~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-FG~S~K~~~d~~~IGqFGvG 332 (726)
+..+|..||+||+.+. +..|.|.+.. ..+.-.|.|.|||.||+++++.+++. |-..... .-+-.|+|
T Consensus 45 l~~vl~NLl~NAiky~~~~~I~i~~~~------~~~~~~i~V~D~G~Gi~~~~~~~ife~f~r~~~~-----~~~G~GLG 113 (148)
T d1ysra1 45 LRLAVDNAIANAVKHGGATLVQLSAVS------SRAGVEIAIDDNGSGVPEGERQVVFERFSRGSTA-----SHSGSGLG 113 (148)
T ss_dssp HHHHHHHHHHHHHHTTCCSEEEEEEEE------ETTEEEEEEEESSSCCCGGGHHHHHTSCC----------------CC
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhcCccccCCCC-----CCCCccHH
Confidence 5578999999999975 4456665552 23456899999999999999999886 4322111 11235888
Q ss_pred eeeec---ccccCeEEEEEe
Q 004874 333 FKTGA---MRLGKDALVLTQ 349 (726)
Q Consensus 333 FKSA~---mrLG~~V~V~TK 349 (726)
+.-+- -..|.++.+.|.
T Consensus 114 L~i~~~iv~~hgG~i~~~s~ 133 (148)
T d1ysra1 114 LALVAQQAQLHGGTASLENS 133 (148)
T ss_dssp CHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEEEc
Confidence 75321 234566666554
No 12
>d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]}
Probab=97.58 E-value=5.2e-05 Score=71.91 Aligned_cols=90 Identities=16% Similarity=0.304 Sum_probs=58.5
Q ss_pred HHHHHHHHHHcccccC---------CCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhhcccCCCCC----C
Q 004874 255 IFGAIAELVDNSRDAK---------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDA----D 321 (726)
Q Consensus 255 pf~ALaELIDNA~DAg---------At~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~FG~S~K~~----~ 321 (726)
+..+|.+||+||++|. .+.|.|.+.. ..+.-.|.|.|||.||+++++.++|...++.+.. .
T Consensus 61 l~qvl~NLl~NA~~~~~~~~~~~~~~~~I~v~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~f~~~~~~~~~~~ 134 (190)
T d1jm6a2 61 LYHMLFELFKNAMRATVESHESSLTLPPIKIMVAL------GEEDLSIKMSDRGGGVPLRKIERLFSYMYSTAPTPQPGT 134 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCTTSCCCEEEEEEE------CSSEEEEEEEECSCCCCGGGTTGGGCTTCCCSCCC----
T ss_pred HHHHHHHHHHHHHHHhhccCccccccceEEEEEEe------CCeEEEEEEeccCCCCCHHHHHHHhCcceecCCcCcCcc
Confidence 4578999999999872 1346776653 3356889999999999999999999744333221 1
Q ss_pred CCCccccccceeeeecc---cccCeEEEEEee
Q 004874 322 DPNRIGRFGVGFKTGAM---RLGKDALVLTQT 350 (726)
Q Consensus 322 d~~~IGqFGvGFKSA~m---rLG~~V~V~TK~ 350 (726)
.....+-.|+|+..+-. ..|.++.|.|..
T Consensus 135 ~~~~~~G~GLGL~i~k~ive~hgG~I~v~s~~ 166 (190)
T d1jm6a2 135 GGTPLAGFGYGLPISRLYAKYFQGDLQLFSME 166 (190)
T ss_dssp -----CCSSCHHHHHHHHHHHTTCEEEEEEET
T ss_pred cccccCCCCccHHHHHHHHHHCCCEEEEEecC
Confidence 22334567888864422 356677776643
No 13
>d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]}
Probab=97.48 E-value=6.4e-05 Score=69.30 Aligned_cols=88 Identities=14% Similarity=0.186 Sum_probs=53.9
Q ss_pred HHHHHHHHHHcccccCC---C--ccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhh-cccCCCCCCCCCcccc
Q 004874 255 IFGAIAELVDNSRDAKA---T--KLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGR 328 (726)
Q Consensus 255 pf~ALaELIDNA~DAgA---t--~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-FG~S~K~~~d~~~IGq 328 (726)
+..+|..||+||+.+.. . .|.|.+.. ..+.-.|+|.|||.||+++++.+++. |-..... .....+-
T Consensus 50 l~qvl~NLi~NAik~t~~~~~~~~i~i~~~~------~~~~~~i~V~D~G~GI~~~~~~~iF~~F~~~~~~--~~~~~~G 121 (161)
T d2c2aa2 50 IRQVLLNLLNNGVKYSKKDAPDKYVKVILDE------KDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSS--LTYEVPG 121 (161)
T ss_dssp HHHHHHHHHHHHHHTCCTTCTTCEEEEEEEE------ETTEEEEEEEECSSCCCGGGTTGGGSTTCCCC-----------
T ss_pred HHHHHHHHHHHHHHhhhcCCCcceeeEEEEe------cCCEEEEEEEEcCCCCCHHHHHHhhCCcEEcCCC--CCCCCCc
Confidence 44789999999999853 2 34444442 23457899999999999999999986 4332221 1122334
Q ss_pred ccceeeeec---ccccCeEEEEEee
Q 004874 329 FGVGFKTGA---MRLGKDALVLTQT 350 (726)
Q Consensus 329 FGvGFKSA~---mrLG~~V~V~TK~ 350 (726)
.|+|+.-+- -..|.++.|.|..
T Consensus 122 ~GLGL~i~k~iv~~hgG~i~v~s~~ 146 (161)
T d2c2aa2 122 TGLGLAITKEIVELHGGRIWVESEV 146 (161)
T ss_dssp CCCTHHHHHHHHHHTTCEEEEEEET
T ss_pred ccHHHHHHHHHHHHCCCEEEEEecC
Confidence 588875331 2456667666653
No 14
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=97.44 E-value=0.0001 Score=72.18 Aligned_cols=142 Identities=18% Similarity=0.213 Sum_probs=84.4
Q ss_pred CceeeecCHH-HHHHhhccccCCHHHHHHHHHHcccccC----CCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHh-
Q 004874 233 EKNFVRADPS-YLQTLGQAHSGWIFGAIAELVDNSRDAK----ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQD- 306 (726)
Q Consensus 233 ~~~~~~v~pk-~L~slstsh~~~pf~ALaELIDNA~DAg----At~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~ee- 306 (726)
+..+++..|. |+=+.. ...-+.-.+-|+|+||+|.. ++.+.|.+. ....|+|.|||-||+-+.
T Consensus 14 ~lE~Vr~RP~mYiGs~~--~~~gl~~l~~Eil~Na~De~~~~~~~~i~v~i~---------~dgsIsV~ddGrGIPv~~h 82 (219)
T d1ei1a2 14 GLDAVRKRPGMYIGDTD--DGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIH---------ADNSVSVQDDGRGIPTGIH 82 (219)
T ss_dssp TTHHHHHCTHHHHCCSS--SSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEC---------TTSCEEEEECSSCCCCSBC
T ss_pred chhHHHhCCCcEEccCC--CcccchhhhHhHhhhhhhhhcCCCccceeEEEc---------CCCeEEEEECCcccccccc
Confidence 4455555555 443221 11246678899999999973 355555543 135799999999999763
Q ss_pred -------HHhhhh-cccCCC--CCCCCCccccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecCCCceEEe-cCc
Q 004874 307 -------VVRMTY-FGHKQP--DADDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEI-PIV 375 (726)
Q Consensus 307 -------L~~~l~-FG~S~K--~~~d~~~IGqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~i~V-Pi~ 375 (726)
++-.|+ +..+.+ .....-..|..|+|.+.+-. +++.+.|.+++.+. ...++|..|.-.-.+ .+.
T Consensus 83 ~~~~~~~~e~if~~l~tg~~fd~~~~~~sgG~nGvG~~~~Na-lS~~f~v~~~r~g~----~y~q~f~~g~~~~~~~~~~ 157 (219)
T d1ei1a2 83 PEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNA-LSQKLELVIQREGK----IHRQIYEHGVPQAPLAVTG 157 (219)
T ss_dssp TTTSSBHHHHHHHSTTEESCSSSSSCSSCSCCSSCHHHHHHH-TEEEEEEEEEETTE----EEEEEEETTEESSCCEEEE
T ss_pred CccCCchhhhhhhhhhhccCCCCCcceeEcCccccceeEEEE-eeeEEEEEEEECCE----EEEEEEeCCeECCCceecc
Confidence 233333 222222 12235677999999965544 88999999988764 334455443111111 112
Q ss_pred cCCCCCcEEEEEecC
Q 004874 376 SYYRKGQFMELDTVV 390 (726)
Q Consensus 376 ~~e~~GT~I~l~lk~ 390 (726)
.....||+|...+..
T Consensus 158 ~~~~~gT~I~F~PD~ 172 (219)
T d1ei1a2 158 ETEKTGTMVRFWPSL 172 (219)
T ss_dssp ECSCCEEEEEEEECT
T ss_pred CcCCCCEEEEEEECc
Confidence 334579998876643
No 15
>d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.39 E-value=0.0001 Score=63.21 Aligned_cols=50 Identities=26% Similarity=0.326 Sum_probs=37.8
Q ss_pred HHHHHHHHHcccccC----------CCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhh
Q 004874 256 FGAIAELVDNSRDAK----------ATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMT 311 (726)
Q Consensus 256 f~ALaELIDNA~DAg----------At~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l 311 (726)
..++..||+||++|. ...|.|.+.. ..+.-.|+|.|||.||+++++.+.|
T Consensus 66 ~qvl~NLl~NAi~~~~~~~~~~~~~~~~I~i~~~~------~~~~v~i~V~D~G~GI~~e~~~~IF 125 (125)
T d1y8oa2 66 FHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTL------GKEDLSIKISDLGGGVPLRKIDRLF 125 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCCCEEEEEEE------CSSEEEEEEEECSCCCCHHHHGGGG
T ss_pred HHHHHHHHHHHHHhhhccccccCCCceeEEEEeec------CCCEEEEEEEEeCCCcCHHHHcccC
Confidence 467889999999882 2356665552 3356788999999999999998764
No 16
>d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.34 E-value=0.00027 Score=69.87 Aligned_cols=125 Identities=13% Similarity=0.142 Sum_probs=74.6
Q ss_pred HHHHHHHHHHccccc-----CCCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHH--------hhhh-cccCCCCC
Q 004874 255 IFGAIAELVDNSRDA-----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVV--------RMTY-FGHKQPDA 320 (726)
Q Consensus 255 pf~ALaELIDNA~DA-----gAt~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~--------~~l~-FG~S~K~~ 320 (726)
+.-.+-|+|+||.|. ..+.|.|.|+. +...|+|.|||-||+-+.-. -.|+ +..+.+..
T Consensus 54 l~ki~dEil~Na~D~~~r~~~~~~I~v~i~~--------~~~si~V~d~GrGIPv~~h~~~~~~~~e~ift~l~ag~nfd 125 (239)
T d1pvga2 54 LFKIFDEILVNAADNKVRDPSMKRIDVNIHA--------EEHTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYD 125 (239)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEEET--------TTTEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCC
T ss_pred ceeecceeeecccchhhhccccceEEEEEeC--------CCCEEEEEecCcceeeeeccccccchhheeeEeeccccccc
Confidence 556788999999995 34677777762 35789999999999765321 1222 22233321
Q ss_pred --CCCCccccccceeeeecccccCeEEEEEeeCCCcceEEEEeeecCCCceEEecC---ccCCCCCcEEEEEecC
Q 004874 321 --DDPNRIGRFGVGFKTGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKDNLEIPI---VSYYRKGQFMELDTVV 390 (726)
Q Consensus 321 --~d~~~IGqFGvGFKSA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~~i~VPi---~~~e~~GT~I~l~lk~ 390 (726)
......|..|+|.+.+-. +++.++|.+...... ...-+.|..|......|. ......||+|+..+..
T Consensus 126 ~~~~k~sgGlnGvG~~vvNa-lS~~f~vev~~~~~g--~~~~q~~~~g~~~~~~~~i~~~~~~~~gT~ItF~PD~ 197 (239)
T d1pvga2 126 DDEKKVTGGRNGYGAKLCNI-FSTEFILETADLNVG--QKYVQKWENNMSICHPPKITSYKKGPSYTKVTFKPDL 197 (239)
T ss_dssp TTSCCCCSCCSSCHHHHHHH-TEEEEEEEEEETTTT--EEEEEEEETTTTEECCCEEEECCSSCCEEEEEEEECG
T ss_pred cccceeeCCeeccceeehhh-hhHhhheeeEEeecC--ceEEEEeeCCccccccccccccccCCCceEEEEEeCH
Confidence 124578999999965544 889988877533221 122234434433222222 2233467888766543
No 17
>d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]}
Probab=97.04 E-value=0.00075 Score=63.60 Aligned_cols=107 Identities=18% Similarity=0.197 Sum_probs=64.9
Q ss_pred HHHHHHHHHccccc----CCCccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhhcccCCCCCCCCCccccccc
Q 004874 256 FGAIAELVDNSRDA----KATKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNRIGRFGV 331 (726)
Q Consensus 256 f~ALaELIDNA~DA----gAt~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~FG~S~K~~~d~~~IGqFGv 331 (726)
--.|.|+||||+|. -++.|.|.+. ....++|.|||-||+-+- .. +. ... ...+
T Consensus 7 hHlv~EivDNsiDEa~aG~~~~I~V~l~---------~D~si~V~D~GRGIPvd~-------h~--~~--~~~---~~e~ 63 (168)
T d1s14a_ 7 NHLGQEVIDNSVDEALAGHAKRVDVILH---------ADQSLEVIDDGRGMPVDI-------HP--EE--GVP---AVEL 63 (168)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEEEEC---------TTSCEEEEECSSCCCCSB-------CT--TT--CSB---HHHH
T ss_pred ceEEeeeeecHHHHHHcCCCCEEEEEEe---------CCCeEEEEEEecccceee-------ec--cC--CCc---hhhc
Confidence 34689999999996 3688888775 135799999999999541 00 00 000 0011
Q ss_pred eee-eecccccCeEEEEEeeCCCcceEEEEeeecCCCc--eE-EecCccCCCCCcEEEEEec
Q 004874 332 GFK-TGAMRLGKDALVLTQTADSRSIAFLSQSLNQGKD--NL-EIPIVSYYRKGQFMELDTV 389 (726)
Q Consensus 332 GFK-SA~mrLG~~V~V~TK~~g~~si~~ls~Sf~eG~~--~i-~VPi~~~e~~GT~I~l~lk 389 (726)
.|- |+.=.|+..+.|.+++.|. ...+.|..|.- .. .+........||.|...+.
T Consensus 64 v~t~SVVNALS~~l~v~v~RdGk----~~~q~f~~G~~~~~l~~~~~~~~~~tGT~I~F~PD 121 (168)
T d1s14a_ 64 ILCISVVNALSKRVEVNVRRDGQ----VYNIAFENGEKVQDLQVVGTCGKRNTGTSVHFWPD 121 (168)
T ss_dssp HHHTSHHHHHEEEEEEEEEETTE----EEEEEEETTEEEEEEEEEEECCTTCCEEEEEEEEC
T ss_pred cCceeEeeeccCeEEEEEEECCE----EEEEEECCCccCCcccceeecccCCCcEEEEEeec
Confidence 111 3333678999999998874 34466655532 21 1222333456999887654
No 18
>d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]}
Probab=96.72 E-value=0.00049 Score=60.56 Aligned_cols=59 Identities=12% Similarity=0.021 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHcccccCC----CccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhhcccC
Q 004874 254 WIFGAIAELVDNSRDAKA----TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHK 316 (726)
Q Consensus 254 ~pf~ALaELIDNA~DAgA----t~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~FG~S 316 (726)
+...++..||+||++|.. ....|.|... ..++...|+|.|||.||+++.+.+.+.-|+.
T Consensus 97 ~l~qvl~Nll~NAi~~~~~~~~~~~~I~i~~~----~~~~~~~i~v~D~G~gi~~e~l~~if~~~y~ 159 (179)
T d1ixma_ 97 KLAKLMRKLFHLFDQAVSRESENHLTVSLQTD----HPDRQLILYLDFHGAFADPSAFDDIRQNGYE 159 (179)
T ss_dssp HHHHHHHHHHHHHHHHBCTTSCCEEEEEEECC----CSSSSCEEEEEEESCBSCGGGCC--------
T ss_pred hhHHHHHHHHHHHHHHhhhccccchhhhhhhc----ccccEEEEEEEeCCCCcCHHHHHHHHHhccc
Confidence 355778999999999853 3344555421 2346789999999999999999999864443
No 19
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]}
Probab=96.39 E-value=0.002 Score=57.68 Aligned_cols=81 Identities=20% Similarity=0.273 Sum_probs=48.5
Q ss_pred HHHHHHHHHHcccccC---C--CccEEEEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhh-cccCCCCCCCCCcccc
Q 004874 255 IFGAIAELVDNSRDAK---A--TKLEISIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTY-FGHKQPDADDPNRIGR 328 (726)
Q Consensus 255 pf~ALaELIDNA~DAg---A--t~V~I~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~-FG~S~K~~~d~~~IGq 328 (726)
...|+.||+.||+.++ . ..|.|.+.. .++.-.|.|.|||.||+.. ...+. |..+.. ..+.
T Consensus 40 i~~av~E~v~Nai~ha~~~~~~~~I~i~~~~------~~~~l~i~i~D~G~gi~~~--~~~~~~~~~~~~------~~~~ 105 (139)
T d1th8a_ 40 IKTVVSEAVTNAIIHGYNNDPNGIVSISVII------EDGVVHLTVRDEGVGIPDI--EEARQPLFTTKP------ELER 105 (139)
T ss_dssp HHHHHHHHHHHHHHTTSTTCTTSEEEEEEEE------ETTEEEEEEEECSSCCSCH--HHHTCCC-------------CC
T ss_pred HHHHHHHhhhhhhheecCCCCCcEEEEEEEE------ecCEEEEEEcccccccccc--cccccccceecc------cCCC
Confidence 4579999999999974 2 346666553 2356789999999999753 33332 222111 1112
Q ss_pred ccceeeeecccccCeEEEEEee
Q 004874 329 FGVGFKTGAMRLGKDALVLTQT 350 (726)
Q Consensus 329 FGvGFKSA~mrLG~~V~V~TK~ 350 (726)
-|+|+.-. -++++++.|.|..
T Consensus 106 ~GlGL~iv-~~l~d~i~i~s~~ 126 (139)
T d1th8a_ 106 SGMGFTIM-ENFMDEVIVESEV 126 (139)
T ss_dssp CSCHHHHH-HHHSSEEEEEEET
T ss_pred chHHHHHH-HHhCCEEEEEEcC
Confidence 37887432 2467777776654
No 20
>d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=96.09 E-value=0.00043 Score=63.05 Aligned_cols=87 Identities=13% Similarity=0.116 Sum_probs=39.4
Q ss_pred HHHHHHHHHHcccccCCCcc---EE------EEEEcccccCCCCcCEEEEEeCCCCCCHHhHHhhhhcccCCCCCCCCCc
Q 004874 255 IFGAIAELVDNSRDAKATKL---EI------SIESIYFKKAGKDIPMLSIIDDGHGMTHQDVVRMTYFGHKQPDADDPNR 325 (726)
Q Consensus 255 pf~ALaELIDNA~DAgAt~V---~I------~I~~~~d~~~~~~~~~L~I~DNG~GMt~eeL~~~l~FG~S~K~~~d~~~ 325 (726)
+..+|..||+||++|....= .+ .+.. ........-.|.|.|||.||+++++.+++.-.++.+.
T Consensus 45 l~qvl~NLl~NA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~v~D~G~Gi~~~~~~~iF~pf~s~k~------ 116 (156)
T d1r62a_ 45 IEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTL--HGERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGRE------ 116 (156)
T ss_dssp HHHHHHHHHHHHHHHHGGGCEEEEEEEEEEEEEEE--TTEEEEEEEEEEEEEECTTC-----------------------
T ss_pred HHHHHHHHHHHHHHhhhcCCCceeeeccccceeee--ccccCCceEEEEEecCCCCCCHHHHHhhcccceecCC------
Confidence 44789999999999854211 11 1110 0000112356899999999999999999863333332
Q ss_pred cccccceeeeecc---cccCeEEEEEee
Q 004874 326 IGRFGVGFKTGAM---RLGKDALVLTQT 350 (726)
Q Consensus 326 IGqFGvGFKSA~m---rLG~~V~V~TK~ 350 (726)
+-.|+|+..+-- ..|..+.|.|..
T Consensus 117 -~G~GLGL~i~~~iv~~hgG~i~v~s~~ 143 (156)
T d1r62a_ 117 -GGTGLGLSIARNLIDQHSGKIEFTSWP 143 (156)
T ss_dssp ----CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred -CCCCchHHHHHHHHHHCCCEEEEEEeC
Confidence 124788753321 356777776643
No 21
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=81.69 E-value=0.27 Score=37.96 Aligned_cols=34 Identities=18% Similarity=0.461 Sum_probs=22.6
Q ss_pred CCCceecCccchhhccCC-CCCCC--CCCCCCceecC
Q 004874 614 PDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 647 (726)
Q Consensus 614 ~~~~WVQCD~ClKWR~LP-~~~~~--~~lp~~W~C~m 647 (726)
.+..|||||.|.+|--.- .++.. ....+.|+|..
T Consensus 18 ~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~ 54 (64)
T d1we9a_ 18 ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPS 54 (64)
T ss_dssp SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHH
T ss_pred CCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcC
Confidence 455899999999997643 22222 23457899864
No 22
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=76.78 E-value=0.71 Score=36.30 Aligned_cols=32 Identities=22% Similarity=0.828 Sum_probs=23.1
Q ss_pred CCceecCccchhhccCC-CCCC-CCCCCCCceec
Q 004874 615 DQEWVQCNKCRKWRMLD-PGFD-TKSLPVEWFCY 646 (726)
Q Consensus 615 ~~~WVQCD~ClKWR~LP-~~~~-~~~lp~~W~C~ 646 (726)
...|||||.|.+|--+. .++. ....++.|+|.
T Consensus 28 ~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~ 61 (72)
T d1weea_ 28 GERMLACDGCGVWHHTRCIGINNADALPSKFLCF 61 (72)
T ss_dssp SSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCH
T ss_pred CCeEEEeCCCCCcCchhhcCCccccCCCCcEECc
Confidence 44799999999998774 2232 23556899985
No 23
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=70.63 E-value=0.61 Score=37.58 Aligned_cols=34 Identities=15% Similarity=0.342 Sum_probs=22.0
Q ss_pred CCCceecCccchhhccCC-CCCCC--CCCCCCceecC
Q 004874 614 PDQEWVQCNKCRKWRMLD-PGFDT--KSLPVEWFCYM 647 (726)
Q Consensus 614 ~~~~WVQCD~ClKWR~LP-~~~~~--~~lp~~W~C~m 647 (726)
.+..|||||.|..|--.. .++.. ...+++|+|..
T Consensus 23 ~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~ 59 (79)
T d1wepa_ 23 VNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPD 59 (79)
T ss_dssp SSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTT
T ss_pred CCCcEEECCCCCCcEeccccCcchhcCCCCCEEECcc
Confidence 456899999999996543 12221 23456798864
No 24
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.34 E-value=1.2 Score=34.95 Aligned_cols=32 Identities=19% Similarity=0.569 Sum_probs=19.9
Q ss_pred CCceecCccchhhccCCC-CCCC------CCCCCCceec
Q 004874 615 DQEWVQCNKCRKWRMLDP-GFDT------KSLPVEWFCY 646 (726)
Q Consensus 615 ~~~WVQCD~ClKWR~LP~-~~~~------~~lp~~W~C~ 646 (726)
+..|||||.|.+|=-+.= ++.. ...++.|+|.
T Consensus 27 ~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~ 65 (76)
T d1wema_ 27 NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP 65 (76)
T ss_dssp SSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCH
T ss_pred CCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECC
Confidence 447999999999954331 1110 1235679885
No 25
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.87 E-value=7.7 Score=29.19 Aligned_cols=33 Identities=18% Similarity=0.343 Sum_probs=21.1
Q ss_pred CCceecCccchhhccCCC-CCCCCC-CCCCceecC
Q 004874 615 DQEWVQCNKCRKWRMLDP-GFDTKS-LPVEWFCYM 647 (726)
Q Consensus 615 ~~~WVQCD~ClKWR~LP~-~~~~~~-lp~~W~C~m 647 (726)
...+|+||.|.+|=-+.= ...... ..+.|+|..
T Consensus 18 ~g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~ 52 (61)
T d1mm2a_ 18 GGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPR 52 (61)
T ss_dssp CSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTT
T ss_pred CCeEEEeCCCCccCchhhcCCCcCcCCCCcEECCC
Confidence 457999999999865431 111122 235899975
No 26
>d1ow1a_ b.131.1.3 (A:) SMART/HDAC1 associated repressor protein, SHARP {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.45 E-value=14 Score=33.81 Aligned_cols=48 Identities=29% Similarity=0.615 Sum_probs=35.0
Q ss_pred CCCccccccCCCCCchhhhHH--------HHHHHhhcCCeEEEEEece-------eEEEEeCCC
Q 004874 68 GMSHCFLSPAPECSRDHNEWR--------RFLIYLQGRDMVAIAKFKF-------WEFYILPPD 116 (726)
Q Consensus 68 ~~~~~~~~p~~~~~~~~~ew~--------~f~~~l~~~~~~~~~~~~~-------~~~~~~~~~ 116 (726)
-..||+|--.| +.++..++. -|.+||+.-+-.|||.+.. .-+|||||-
T Consensus 76 ~~~~c~lLAlp-~~~~~~d~~~q~~~l~~~lV~YLkqKqAAGVI~l~~~~~~~~~~VLh~FPPC 138 (170)
T d1ow1a_ 76 ETDYCLLLALP-CGRDQEDVVSQTESLKAAFITYLQAKQAAGIINVPNPGSNQPAYVLQIFPPC 138 (170)
T ss_dssp TTTEEEEEEEE-CCSSHHHHHHHHHHHHHHTHHHHHHHTEEEEEEECCTTCCSCCEEEEEECSS
T ss_pred CCCceEEEEee-CCCCccccchhhhHHHHHHHHHHHHhccCceEecCCCCCCCceEEEEecCCc
Confidence 36777664444 333444444 4999999999999998873 689999996
No 27
>d1rlha_ d.256.1.1 (A:) Hypothetical protein Ta1353 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=24.86 E-value=13 Score=33.10 Aligned_cols=13 Identities=62% Similarity=1.132 Sum_probs=11.6
Q ss_pred CCCCcceEEEEec
Q 004874 543 GDTGRGVIGVIDV 555 (726)
Q Consensus 543 ~~~GrGVIGVvE~ 555 (726)
...||||+||||-
T Consensus 131 t~qGrgVlGVVDG 143 (151)
T d1rlha_ 131 GERGNGVLGVIDG 143 (151)
T ss_dssp CSSSEEEEEEEES
T ss_pred cCCCcEEEEEecC
Confidence 4689999999997
No 28
>d1vgga_ d.256.1.1 (A:) Hypothetical protein TT1634 (TTHA1091) {Thermus thermophilus [TaxId: 274]}
Probab=21.97 E-value=14 Score=33.43 Aligned_cols=38 Identities=21% Similarity=0.187 Sum_probs=22.5
Q ss_pred CCCCcceEEEEeccccccCCCCcccccCCCcCccCchhHHHHHHHHhHH
Q 004874 543 GDTGRGVIGVIDVSDLMDEGNGLVWVHNNKQGFLDCEPYARLEEWLGKV 591 (726)
Q Consensus 543 ~~~GrGVIGVvE~n~lv~~p~g~v~PtHNKQdFe~t~~y~rLe~~Lg~~ 591 (726)
...||||+||||- | .|.|- .+=++.++-+.|++.+|-+
T Consensus 123 t~qGrgvlGVvDG-~---~p~GV-------E~eed~~~Rk~~Lr~iGYK 160 (161)
T d1vgga_ 123 EGEQRAILGVMDG-F---TPLGV-------EDEAEVAWRKDLLRRLGYK 160 (161)
T ss_dssp ETTEEEEEEEEES-C---CCCEE-------CCHHHHHHHHHHHHHHTSC
T ss_pred cCCCcEEEEEecC-C---CCCCc-------cCHHHHHHHHHHHHHhCcC
Confidence 3789999999998 3 12111 1123445566667666643
Done!