Your job contains 1 sequence.
>004877
MPTKRTVSQPISTAYDDDDFQVPLSQTPKFTTTISKKQKIPLKPSNNPSRPSKKPKPVTN
LGKENNIEGFYLNSDETCSLEAIPSSIDCTRPTACVDIDHSPECEEIKEILKVNEGYLRN
SVESRLLRPRAADCRLSEESEEEEEDAVLDVLLKLCDKNDVNCNKIDESVRCPLCGIDIS
DLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLGRSPQKAVDVSPVVEF
LHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAV
ESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPT
NGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFL
THFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCL
EANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDF
PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK
CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS
KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV
SLLLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004877
(725 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2043689 - symbol:AT2G45700 species:3702 "Arabi... 1949 2.2e-201 1
UNIPROTKB|Q5QJC4 - symbol:DCLRE1A "DNA cross-link repair ... 712 8.6e-73 2
UNIPROTKB|F1NC75 - symbol:DCLRE1A "DNA cross-link repair ... 711 1.1e-72 2
ZFIN|ZDB-GENE-050522-124 - symbol:dclre1a "DNA cross-link... 690 9.7e-72 2
RGD|1306156 - symbol:Dclre1a "DNA cross-link repair 1A" s... 702 1.1e-71 2
TAIR|locus:2090832 - symbol:SNM1 "SENSITIVE TO NITROGEN M... 716 9.9e-71 1
UNIPROTKB|I3LLR2 - symbol:DCLRE1A "Uncharacterized protei... 678 1.3e-70 3
UNIPROTKB|F1S5H8 - symbol:DCLRE1A "Uncharacterized protei... 678 1.7e-70 3
MGI|MGI:1930042 - symbol:Dclre1a "DNA cross-link repair 1... 691 1.8e-70 2
UNIPROTKB|I3LAK7 - symbol:DCLRE1A "Uncharacterized protei... 683 2.3e-70 2
UNIPROTKB|E1BN11 - symbol:DCLRE1A "Uncharacterized protei... 672 1.3e-69 3
UNIPROTKB|Q6PJP8 - symbol:DCLRE1A "DNA cross-link repair ... 681 1.2e-68 2
UNIPROTKB|E2QZ29 - symbol:DCLRE1A "Uncharacterized protei... 668 5.2e-65 1
DICTYBASE|DDB_G0277755 - symbol:dclre1 "DNA repair metall... 577 2.2e-55 1
POMBASE|SPAC22A12.01c - symbol:pso2 "DNA 5' exonuclease (... 450 7.0e-54 3
FB|FBgn0037338 - symbol:Snm1 "Snm1" species:7227 "Drosoph... 528 1.2e-50 1
SGD|S000004745 - symbol:PSO2 "Nuclease required for DNA s... 286 1.0e-39 5
ASPGD|ASPL0000068746 - symbol:AN10962 species:162425 "Eme... 247 4.9e-36 4
UNIPROTKB|Q5QJC3 - symbol:DCLRE1B "5' exonuclease Apollo"... 318 3.7e-32 2
GENEDB_PFALCIPARUM|PF14_0711 - symbol:PF14_0711 "hypothet... 222 3.1e-31 2
UNIPROTKB|Q8IK95 - symbol:PF14_0711 "DNA repair metallo-b... 222 3.1e-31 2
UNIPROTKB|F1SBR3 - symbol:DCLRE1B "Uncharacterized protei... 326 3.3e-30 2
UNIPROTKB|F1NF26 - symbol:DCLRE1B "5' exonuclease Apollo"... 300 1.5e-29 2
UNIPROTKB|D2H8V8 - symbol:DCLRE1B "5' exonuclease Apollo"... 312 2.3e-28 2
UNIPROTKB|A8J921 - symbol:CHLREDRAFT_176829 "Predicted pr... 223 3.7e-28 2
MGI|MGI:2156057 - symbol:Dclre1b "DNA cross-link repair 1... 305 4.4e-28 2
UNIPROTKB|E1BFI5 - symbol:DCLRE1B "Uncharacterized protei... 312 4.5e-28 2
TAIR|locus:2015939 - symbol:AT1G27410 "AT1G27410" species... 319 9.2e-28 1
UNIPROTKB|E2RLH4 - symbol:DCLRE1B "Uncharacterized protei... 305 2.0e-27 2
ZFIN|ZDB-GENE-061013-328 - symbol:dclre1b "DNA cross-link... 292 2.4e-27 2
RGD|1310343 - symbol:Dclre1b "DNA cross-link repair 1B" s... 296 6.3e-27 2
UNIPROTKB|Q9H816 - symbol:DCLRE1B "5' exonuclease Apollo"... 295 1.9e-26 2
CGD|CAL0005993 - symbol:orf19.2926 species:5476 "Candida ... 128 5.8e-20 6
UNIPROTKB|F1NW11 - symbol:DCLRE1C "Protein artemis" speci... 240 1.2e-16 1
UNIPROTKB|Q5QJC2 - symbol:DCLRE1C "Protein artemis" speci... 240 1.2e-16 1
RGD|708574 - symbol:Dclre1c "DNA cross-link repair 1C" sp... 229 1.2e-16 2
WB|WBGene00045237 - symbol:mrt-1 species:6239 "Caenorhabd... 232 6.5e-16 1
UNIPROTKB|A6QLL4 - symbol:DCLRE1C "Uncharacterized protei... 223 7.5e-16 2
MGI|MGI:2441769 - symbol:Dclre1c "DNA cross-link repair 1... 222 9.5e-16 2
UNIPROTKB|Q96SD1 - symbol:DCLRE1C "Protein artemis" speci... 219 1.9e-15 2
UNIPROTKB|E2RBE9 - symbol:DCLRE1C "Uncharacterized protei... 206 5.0e-14 2
ZFIN|ZDB-GENE-041210-72 - symbol:dclre1c "DNA cross-link ... 214 6.6e-14 1
UNIPROTKB|F1RW83 - symbol:DCLRE1C "Uncharacterized protei... 206 1.3e-13 2
TAIR|locus:505006131 - symbol:AT1G19025 "AT1G19025" speci... 184 3.1e-11 2
CGD|CAL0004348 - symbol:PSO2 species:5476 "Candida albica... 135 5.9e-07 2
UNIPROTKB|Q5A5N8 - symbol:PSO2 "Putative uncharacterized ... 135 5.9e-07 2
TAIR|locus:2152521 - symbol:AT5G48680 "AT5G48680" species... 130 5.6e-06 1
ZFIN|ZDB-GENE-110110-3 - symbol:bicc2 "bicaudal C homolog... 134 8.3e-06 2
UNIPROTKB|Q0C1L6 - symbol:HNE_1669 "Putative uncharacteri... 138 1.5e-05 2
TAIR|locus:2098550 - symbol:AT3G07170 species:3702 "Arabi... 119 0.00012 1
DICTYBASE|DDB_G0274799 - symbol:cpsf3 "cleavage and polya... 112 0.00013 3
UNIPROTKB|Q9H694 - symbol:BICC1 "Protein bicaudal C homol... 129 0.00020 1
UNIPROTKB|F1RG08 - symbol:BICC1 "Uncharacterized protein"... 124 0.00062 1
UNIPROTKB|F1MDL5 - symbol:BICC1 "Uncharacterized protein"... 123 0.00076 1
TAIR|locus:2020643 - symbol:AT1G70180 species:3702 "Arabi... 119 0.00087 1
>TAIR|locus:2043689 [details] [associations]
symbol:AT2G45700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] InterPro:IPR001279
InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454 SMART:SM00849
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016787
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 EMBL:AC003680 EMBL:AC004665
eggNOG:COG1236 KO:K15340 InterPro:IPR011084 Pfam:PF07522
HSSP:P39769 EMBL:BT005774 EMBL:BT006104 EMBL:AK228444
IPI:IPI00544610 PIR:T00883 RefSeq:NP_182094.1 UniGene:At.36606
ProteinModelPortal:O64649 SMR:O64649 PRIDE:O64649
EnsemblPlants:AT2G45700.1 GeneID:819178 KEGG:ath:AT2G45700
TAIR:At2g45700 HOGENOM:HOG000030436 InParanoid:O64649 OMA:TIIRYEV
PhylomeDB:O64649 ProtClustDB:CLSN2683367 ArrayExpress:O64649
Genevestigator:O64649 Uniprot:O64649
Length = 723
Score = 1949 (691.1 bits), Expect = 2.2e-201, P = 2.2e-201
Identities = 410/730 (56%), Positives = 504/730 (69%)
Query: 16 DDDDFQVPLSQTPKFTTTISKKQKIXXXXXXXXXXXXXXXXXVTNLGKEN-------NIE 68
DDDDFQ+P P +I K GKEN + +
Sbjct: 8 DDDDFQIP----PSSQLSIRKPLHPTNANNISHRPPNKKPRLCRYPGKENVTPPPSPDPD 63
Query: 69 GFYLNSDETCSLEAIPSSIDCTRPTACVDIDH-SPECEEIKE-ILKVN-EGYLRNSVESR 125
F +S C L+ IPSS+DC+ I E +E K+ +KVN EGYL NS+E+R
Sbjct: 64 LFCSSSTPHCILDCIPSSVDCSLGDFNGPISSLGEEDKEDKDDCIKVNREGYLCNSMEAR 123
Query: 126 LLRPRAA---DCRLXXXXXXXX-XDAVLDVLLKLCDKNDVNCNKI----DESVRCPLCGI 177
LL+ R D + ++ LDVL+ LC +++ + D+S++CPLC +
Sbjct: 124 LLKSRICLGFDSGIHEDDEGFVESNSELDVLINLCSESEGRSGEFSLGKDDSIQCPLCSM 183
Query: 178 DISDLNEELRQAHTNNCLDKCENQA--QDVVFPKHERGPRLEPEIDLGLGRSPQKAVDVS 235
DIS L+EE RQ H+N CLDK NQ QD + ++ ID + + PQ D+S
Sbjct: 184 DISSLSEEQRQVHSNTCLDKSYNQPSEQDSLRKCENLSSLIKESIDDPV-QLPQLVTDLS 242
Query: 236 PVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKE 295
PV+++L SLGLA+YE+ F+REEIDWDTLQ LTEEDL+ IG+T+LGPRKKI++ L ++
Sbjct: 243 PVLKWLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSGVRDP 302
Query: 296 YSRAVESNKDAHVSNDGSSSYHGSERHKEASKVI-VDGSSKPAANKLITDFFLGSITNVK 354
++ + E +H + S H +ER ++ S KP ANKLIT+FF G T
Sbjct: 303 FASSAEVQAQSHCT-----SGHVTERQRDKSTTRKASEPKKPTANKLITEFFPGQATEGT 357
Query: 355 KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD 414
K+ T + + KS S S ++ ++ + G K K IP W C+PGTPFRVDAFKYL D
Sbjct: 358 KIRTAP--KPVAEKSPSDSSSRRAVRRNGNNG-KSKVIPHWNCIPGTPFRVDAFKYLTRD 414
Query: 415 CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG 474
C HWFLTHFH+DHYQGLT+SF HGKIYCSL+TA+LVNMKIGIPW+RLQVL L QK I+G
Sbjct: 415 CCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKIGIPWERLQVLDLGQKVNISG 474
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
IDVTC +ANHCPGSI+ILFEP NGKAVLHTGDFR+SEEM++ + I +LILDTTYC
Sbjct: 475 IDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSEEMSNWLI--GSHISSLILDTTYC 532
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
NP YDFPKQEAVIQFV+EAIQAE+FNPKTLFLIGSYTIGKERLFLEVARVLR+KIY+N A
Sbjct: 533 NPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLREKIYINPA 592
Query: 595 KFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSP 654
K ++L+CL FSK+DIQWFT E ESHIHV+P+WTLASFKRLKH++N+Y R+SLIVAFSP
Sbjct: 593 KLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLASFKRLKHVANRYTNRYSLIVAFSP 652
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
TGWT K KKKSPGRR QQGTIIRYEVPYSEH SFTELKEFV+ VSPE IIPSVNNDG D
Sbjct: 653 TGWTSGKTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVNNDGPD 712
Query: 715 SANAMVSLLL 724
SA AMVSLL+
Sbjct: 713 SAAAMVSLLV 722
>UNIPROTKB|Q5QJC4 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9031 "Gallus gallus" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000715 "nucleotide-excision repair, DNA damage
recognition" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005654 GO:GO:0016787 Reactome:REACT_115612
eggNOG:COG1236 EMBL:AY376896 IPI:IPI00680526 RefSeq:NP_001008683.1
UniGene:Gga.22844 ProteinModelPortal:Q5QJC4 STRING:Q5QJC4
GeneID:423902 KEGG:gga:423902 CTD:9937 HOGENOM:HOG000168450
HOVERGEN:HBG081418 InParanoid:Q5QJC4 KO:K15340 OrthoDB:EOG4F4SB1
NextBio:20826302 GO:GO:0000715 InterPro:IPR011084 Pfam:PF07522
Uniprot:Q5QJC4
Length = 972
Score = 712 (255.7 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 170/461 (36%), Positives = 255/461 (55%)
Query: 268 EEDLIGIGVTALGPRKKIL--HTLCEIKKEYSRAVESNK-DA--------HVSNDGSSSY 316
EE+L GV P K + H+L + + S A E + D V +
Sbjct: 495 EENLDSTGVCFPSPISKTVSSHSLASMNAKSSPAKELKQMDIGVFFGLKPKVKEESKGEA 554
Query: 317 HGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRK 376
SE + S V G +P K + GS+ +++ V +N G SG RK
Sbjct: 555 CLSEGKQIPSSVAPSGK-RPRQQKRKAE---GSVEDLEAVEESSNKDGGDANVTSGGQRK 610
Query: 377 -KHAAKDQS---KGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQG 430
+ ++ S +G + K P + +PGT F VDAF+Y + G C+ +FLTHFH DHY G
Sbjct: 611 WRKRFRESSTTDEGARKKQCPFYKKIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYCG 669
Query: 431 LTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSII 490
LT++F +YC+ IT LV K+ + + VLP++ + + GI V L+ANHCPG+ +
Sbjct: 670 LTKNFVF-PLYCNKITGNLVKSKLRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATM 728
Query: 491 ILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFV 550
ILF +G A+LHTGDFR M L IHTL LDTTYC+P Y FP Q+ VIQF
Sbjct: 729 ILFYLPSGTAILHTGDFRADPSMERYPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFA 788
Query: 551 IE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
+ A + + NP+TL + G+Y+IGKE++FL +A VL K ++ K++ L+CL+ + +
Sbjct: 789 VNTAFEMVTLNPRTLVVCGTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVN- 847
Query: 610 QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR 669
T N + +H++PM + +FK L+ N+++ F ++AF PTGWT+S
Sbjct: 848 SLITMNWDGTLLHILPMMQI-NFKGLQDHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDI 906
Query: 670 RWQ-QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ Q +G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 907 KPQTRGNITIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 947
Score = 42 (19.8 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 108 CPSCQMPFSLLVVQTPRWHVAECLD 132
>UNIPROTKB|F1NC75 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9031 "Gallus gallus" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005730 GO:GO:0016787 GO:GO:0006289
IPI:IPI00680526 InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:AADN02030915
Ensembl:ENSGALT00000033097 Uniprot:F1NC75
Length = 972
Score = 711 (255.3 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 170/461 (36%), Positives = 255/461 (55%)
Query: 268 EEDLIGIGVTALGPRKKIL--HTLCEIKKEYSRAVESNK-DA--------HVSNDGSSSY 316
EE+L GV P K + H+L + + S A E + D V +
Sbjct: 495 EENLDSTGVCFPSPISKTVSSHSLASMNAKSSPAKELKQMDIGVFFGLKPKVKEESKGEA 554
Query: 317 HGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRK 376
SE + S V G +P K + GS+ +++ V +N G SG RK
Sbjct: 555 CLSEGKQIPSSVAPSGK-RPRQQKRKAE---GSVEDLEAVEESSNKDGGVANVTSGGQRK 610
Query: 377 -KHAAKDQS---KGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQG 430
+ ++ S +G + K P + +PGT F VDAF+Y + G C+ +FLTHFH DHY G
Sbjct: 611 WRKRFRESSTTDEGARKKQCPFYKKIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYCG 669
Query: 431 LTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSII 490
LT++F +YC+ IT LV K+ + + VLP++ + + GI V L+ANHCPG+ +
Sbjct: 670 LTKNFVF-PLYCNKITGNLVKSKLRVKEQYINVLPMDTECIVNGIKVLLLDANHCPGATM 728
Query: 491 ILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFV 550
ILF +G A+LHTGDFR M L IHTL LDTTYC+P Y FP Q+ VIQF
Sbjct: 729 ILFYLPSGTAILHTGDFRADPSMERYPALIGQKIHTLYLDTTYCSPEYTFPSQQEVIQFA 788
Query: 551 IE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
+ A + + NP+TL + G+Y+IGKE++FL +A VL K ++ K++ L+CL+ + +
Sbjct: 789 VNTAFEMVTLNPRTLVVCGTYSIGKEKVFLAIAEVLGSKASMSRDKYKTLQCLESAAVN- 847
Query: 610 QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR 669
T N + +H++PM + +FK L+ N+++ F ++AF PTGWT+S
Sbjct: 848 SLITMNWDGTLLHILPMMQI-NFKGLQEHLNKFSENFDQVLAFKPTGWTYSDSCLSVMDI 906
Query: 670 RWQ-QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ Q +G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 907 KPQTRGNITIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 947
Score = 42 (19.8 bits), Expect = 1.1e-72, Sum P(2) = 1.1e-72
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 108 CPSCQMPFSLLVVQTPRWHVAECLD 132
>ZFIN|ZDB-GENE-050522-124 [details] [associations]
symbol:dclre1a "DNA cross-link repair 1A (PSO2
homolog, S. cerevisiae)" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001279 SMART:SM00849
ZFIN:ZDB-GENE-050522-124 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 EMBL:CU695011
IPI:IPI00829229 Ensembl:ENSDART00000075876 ArrayExpress:F1QNK4
Bgee:F1QNK4 Uniprot:F1QNK4
Length = 904
Score = 690 (248.0 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 148/366 (40%), Positives = 214/366 (58%)
Query: 358 TPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDC 415
T T G+ G R G R ++ K P + +PGT F VDAF+Y + G
Sbjct: 531 TQTEGKRGGRAE--GRKRWNRGKATDGDPKEPKRCPFYKKIPGTGFAVDAFQYGVVEG-V 587
Query: 416 SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGI 475
+ +FLTHFH DHY GL + IYC+ +T+ LV K+ + + VLP+N + + G+
Sbjct: 588 TAYFLTHFHSDHYGGLKKD-SAVPIYCNKVTSNLVKSKLKVDEQYIHVLPMNTECIVQGV 646
Query: 476 DVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCN 535
VT L+ANHCPG+ ++LF +G+ VLHTGDFR M LQ I TL LDTTYC+
Sbjct: 647 KVTLLDANHCPGAAMLLFVLPDGQTVLHTGDFRADPSMERYPELQGLRIQTLYLDTTYCS 706
Query: 536 PLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
P Y FP Q+ V+ F + A + + NP+TL + G+Y++GKE++FL V+ VL K+ ++
Sbjct: 707 PEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCGTYSVGKEKVFLAVSEVLSSKVCLSKD 766
Query: 595 KFRVLKCLDFSKEDI-QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
K+ + CL+ EDI Q TTN + +HV+PM + +FK L+ +++ ++ +VAF
Sbjct: 767 KYNTMCCLE--SEDIGQRITTNWQSAQVHVLPMMQI-NFKNLQTHLKKFSKKYDQLVAFK 823
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
PTGWTF++ QG I Y +PYSEH SF ELK FV+++ P+ IIP+VN
Sbjct: 824 PTGWTFNQTVGVDDILPQTQGNISIYGIPYSEHSSFLELKRFVQWLRPKKIIPTVNVGSW 883
Query: 714 DSANAM 719
S AM
Sbjct: 884 RSRKAM 889
Score = 54 (24.1 bits), Expect = 9.7e-72, Sum P(2) = 9.7e-72
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLDKCENQAQD 204
CP+C + S L + +Q H CLD + ++
Sbjct: 96 CPVCQMPFSILVVQSQQWHVAECLDTAADNCKE 128
>RGD|1306156 [details] [associations]
symbol:Dclre1a "DNA cross-link repair 1A" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0006289 "nucleotide-excision
repair" evidence=IEA;ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 RGD:1306156
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
OrthoDB:EOG4F4SB1 InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:CH473986 IPI:IPI00363761
RefSeq:NP_001099671.1 UniGene:Rn.41244 Ensembl:ENSRNOT00000036321
GeneID:292127 KEGG:rno:292127 UCSC:RGD:1306156 NextBio:633805
Uniprot:D3Z924
Length = 1026
Score = 702 (252.2 bits), Expect = 1.1e-71, Sum P(2) = 1.1e-71
Identities = 159/443 (35%), Positives = 254/443 (57%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ + ES +S G + H +RHK+++ +G+ + + L
Sbjct: 586 KRKAQSSLSDLEFDAKNLNESQHSMELS--GERAQHRRKRHKKSNSP-QEGTYQGRSGHL 642
Query: 342 ITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKK-HAAKDQSKGRKHKDIPTWCCVPG 400
+ LG+++ +++ ++ +R++ S + R + ++ G + P + +PG
Sbjct: 643 TNNPELGAVS-LRR------SKAFARRTPSRTQRGAVNISESSGGGESRRTCPFYKRIPG 695
Query: 401 TPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
T F VDAF+Y + G C+ +FLTHFH DHY GL++ F IYCS IT L+ K+ +
Sbjct: 696 TGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PIYCSEITGSLLKKKLRVQE 753
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
+ LP++ + + G+ V L+ANHCPG+ +ILF+ NG LHTGDFR M S+
Sbjct: 754 QYIHQLPMDTECIVDGVKVVLLDANHCPGATMILFQLPNGAVTLHTGDFRADPSM-ERSL 812
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERL 577
L + +HTL LDTTYC+P Y FP Q+ IQF I A +A + NP+ L + G+Y IGKE++
Sbjct: 813 LASRKVHTLFLDTTYCSPEYTFPSQQEAIQFAINTAFEAVTLNPRALIVCGTYCIGKEKV 872
Query: 578 FLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKH 637
FL +A VL K+ ++ K++ L+CL+ E TT+ S +H++PM + +FK L++
Sbjct: 873 FLAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCNSLVHLLPMMQI-NFKGLQN 930
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFV 696
+ G+F I+AF PTGWT S Q +G I Y +PYSEH S+ E+K FV
Sbjct: 931 HLKKCGGKFDQILAFRPTGWTHSNNITSIADITPQTKGNIAIYGIPYSEHSSYLEMKRFV 990
Query: 697 KFVSPEHIIPSVNNDGRDSANAM 719
+++ P+ IIP+VN S N M
Sbjct: 991 QWLKPQKIIPTVNVGTFQSRNTM 1013
Score = 48 (22.0 bits), Expect = 1.1e-71, Sum P(2) = 1.1e-71
Identities = 22/91 (24%), Positives = 37/91 (40%)
Query: 162 NCNKIDESVRCPL----CG---IDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGP 214
NC S PL CG I S L+ + T NC + ++ Q++ F + +
Sbjct: 285 NCQSESGSTGLPLPENGCGDFEISYSPLHSD---EETYNCDQELDDSQQELFFTQSSKDS 341
Query: 215 RLEPEIDLGL----GRSPQKAVDVSPVVEFL 241
LE ++ G P++A + P + L
Sbjct: 342 SLE-DVSATFENLHGPFPEEAEGIQPTAKTL 371
Score = 45 (20.9 bits), Expect = 2.3e-71, Sum P(2) = 2.3e-71
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 124 CPSCQMPFSSLLGQTPRWHVFECLD 148
>TAIR|locus:2090832 [details] [associations]
symbol:SNM1 "SENSITIVE TO NITROGEN MUSTARD 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006281 GO:GO:0016787 eggNOG:COG1236 KO:K15340
InterPro:IPR011084 Pfam:PF07522 EMBL:X98130 EMBL:AB026648
UniGene:At.21140 UniGene:At.43974 EMBL:X97827 EMBL:AK117422
EMBL:BT005000 IPI:IPI00516333 RefSeq:NP_001030773.1
RefSeq:NP_189302.1 RefSeq:NP_850635.1 ProteinModelPortal:Q38961
SMR:Q38961 STRING:Q38961 EnsemblPlants:AT3G26680.1
EnsemblPlants:AT3G26680.2 EnsemblPlants:AT3G26680.3 GeneID:822280
KEGG:ath:AT3G26680 GeneFarm:5058 TAIR:At3g26680
HOGENOM:HOG000030842 InParanoid:Q38961 OMA:AALIHFR PhylomeDB:Q38961
ProtClustDB:CLSN2684871 Genevestigator:Q38961 GermOnline:AT3G26680
Uniprot:Q38961
Length = 484
Score = 716 (257.1 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 160/388 (41%), Positives = 235/388 (60%)
Query: 343 TDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQS-KGRKHKDIPTWCCVPGT 401
TD F ++K S T+ S S K + + K+ +D S + P + +PGT
Sbjct: 99 TDLFQS--WGLQKPSPFTSPASNSAKKTTSALGKRR--RDSSFSNDSPRPCPFYKKLPGT 154
Query: 402 PFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
PF VDAF+Y ++G CS +FLTHFH DHY GLT+++ HG IYCS +T+RL+ + + +
Sbjct: 155 PFTVDAFRYGCVQG-CSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVNPS 213
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ L L+ + TI GI VT +EANHCPG+ +I F +G LHTGDFR S++M + +L
Sbjct: 214 SIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKQMQTHPLL 273
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF---NPKTLFLIGSYTIGKER 576
+H L LDTTYCNP Y FP +E V+ +V+ + F PKTL ++GSY+IGKE
Sbjct: 274 FNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRI--TKDFLRKQPKTLIVVGSYSIGKEC 331
Query: 577 LFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW-FTTNEHESHIHVMPMWTLASFKRL 635
++L +A+ L KI+ NA++ R+L+ F +DI +T+ + +HV+PM +L +RL
Sbjct: 332 VYLAIAKALGVKIFANASRRRILQ--SFGWDDISKNLSTDGKATCLHVLPMSSL-KVERL 388
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELK 693
Y ++ ++AF PTGWT+S+ G+ + +G I Y VPYSEH SFTEL+
Sbjct: 389 DEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYSEHSSFTELR 448
Query: 694 EFVKFVSPEHIIPSVNNDGRDSANAMVS 721
EFV+F+ P+ IIP+VNN + M S
Sbjct: 449 EFVQFLRPDKIIPTVNNGNAGTREKMQS 476
>UNIPROTKB|I3LLR2 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 EMBL:CU424456
Ensembl:ENSSSCT00000024095 Uniprot:I3LLR2
Length = 1034
Score = 678 (243.7 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 141/339 (41%), Positives = 212/339 (62%)
Query: 376 KKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTR 433
K + + K RK + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++
Sbjct: 680 KTPESSNAGKLRK-RTCPFYKKIPGTGFTVDAFQYGVVEG-CTAYFLTHFHSDHYAGLSK 737
Query: 434 SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF 493
+F +YCS +T L+ K+ + + LP++ + + G+ V L+ANHCPG++++LF
Sbjct: 738 NFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGAVMVLF 796
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE- 552
NG +LHTGDFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I
Sbjct: 797 HLPNGHVILHTGDFRADPTM-ERSLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINT 855
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
A +A + NP TL + G+Y+IGKE++FL +A VL K+ ++ K+ L+CL+ + + +
Sbjct: 856 AFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEIN-SFI 914
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
TT+ S +H++PM + +FK L++ ++ G+++ I+AF PTGWT S K S
Sbjct: 915 TTDMCNSLVHLLPMMQI-NFKGLQNHLKKFGGKYNQILAFRPTGWTHSN-KLTSIADVLP 972
Query: 673 Q--GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q G I Y +PYSEH S+ E+K FV+++ P IIP+VN
Sbjct: 973 QTKGNISIYGIPYSEHSSYPEMKRFVQWLKPRIIIPTVN 1011
Score = 44 (20.5 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 121 CPNCQMPFSSLLGQTPRWHVFECLD 145
Score = 39 (18.8 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 19/82 (23%), Positives = 32/82 (39%)
Query: 301 ESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPT 360
ES+KD + D SSS +R K + +GS + L D + + +
Sbjct: 332 ESSKDGSLEEDDSSSTLFRKRRDSFLKDL-EGSCPEMGSFLPQDKYDEELYKCSHTQNNS 390
Query: 361 NGQSGSRKSFSGSDRKKHAAKD 382
+ +KS D + A+D
Sbjct: 391 PQLTFQKKSIILRDDPAYTAED 412
>UNIPROTKB|F1S5H8 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 InterPro:IPR011084
Pfam:PF07522 OMA:ECPDGLL GeneTree:ENSGT00530000063183 EMBL:CU424456
Ensembl:ENSSSCT00000011643 Uniprot:F1S5H8
Length = 1045
Score = 678 (243.7 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 141/339 (41%), Positives = 212/339 (62%)
Query: 376 KKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTR 433
K + + K RK + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++
Sbjct: 691 KTPESSNAGKLRK-RTCPFYKKIPGTGFTVDAFQYGVVEG-CTAYFLTHFHSDHYAGLSK 748
Query: 434 SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF 493
+F +YCS +T L+ K+ + + LP++ + + G+ V L+ANHCPG++++LF
Sbjct: 749 NFTF-PVYCSEVTGNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGAVMVLF 807
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE- 552
NG +LHTGDFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I
Sbjct: 808 HLPNGHVILHTGDFRADPTM-ERSLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINT 866
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
A +A + NP TL + G+Y+IGKE++FL +A VL K+ ++ K+ L+CL+ + + +
Sbjct: 867 AFEAVTLNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEIN-SFI 925
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
TT+ S +H++PM + +FK L++ ++ G+++ I+AF PTGWT S K S
Sbjct: 926 TTDMCNSLVHLLPMMQI-NFKGLQNHLKKFGGKYNQILAFRPTGWTHSN-KLTSIADVLP 983
Query: 673 Q--GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q G I Y +PYSEH S+ E+K FV+++ P IIP+VN
Sbjct: 984 QTKGNISIYGIPYSEHSSYPEMKRFVQWLKPRIIIPTVN 1022
Score = 44 (20.5 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 120 CPNCQMPFSSLLGQTPRWHVFECLD 144
Score = 39 (18.8 bits), Expect = 1.7e-70, Sum P(3) = 1.7e-70
Identities = 19/82 (23%), Positives = 32/82 (39%)
Query: 301 ESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPT 360
ES+KD + D SSS +R K + +GS + L D + + +
Sbjct: 331 ESSKDGSLEEDDSSSTLFRKRRDSFLKDL-EGSCPEMGSFLPQDKYDEELYKCSHTQNNS 389
Query: 361 NGQSGSRKSFSGSDRKKHAAKD 382
+ +KS D + A+D
Sbjct: 390 PQLTFQKKSIILRDDPAYTAED 411
>MGI|MGI:1930042 [details] [associations]
symbol:Dclre1a "DNA cross-link repair 1A, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 MGI:MGI:1930042
EMBL:AF241240 GO:GO:0005634 GO:GO:0051301 GO:GO:0007067
GO:GO:0016787 GO:GO:0006289 eggNOG:COG1236 HOGENOM:HOG000168450
HOVERGEN:HBG081418 OrthoDB:EOG4F4SB1 InterPro:IPR011084
Pfam:PF07522 EMBL:BC072667 EMBL:AK220214 IPI:IPI00120389
UniGene:Mm.2805 ProteinModelPortal:Q9JIC3 SMR:Q9JIC3 STRING:Q9JIC3
PhosphoSite:Q9JIC3 PRIDE:Q9JIC3 UCSC:uc008hza.1 InParanoid:Q9JIC3
NextBio:311638 Genevestigator:Q9JIC3 GermOnline:ENSMUSG00000025077
Uniprot:Q9JIC3
Length = 1026
Score = 691 (248.3 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 159/442 (35%), Positives = 247/442 (55%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ + ES +S G H +RHK ++ +G + + L
Sbjct: 588 KRKAQSSLSDLEFDAKNLNESQHSVGLS--GEKRQHRRKRHKTSNSPR-EGPCQRRSGHL 644
Query: 342 ITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGT 401
+ + LG ++ K T G++ R + + S+ G + P + +PGT
Sbjct: 645 MNNPELGPVSLSKAFVRRTRGRT-QRGNMNISE-------SSGAGEVRRTCPFYKRIPGT 696
Query: 402 PFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS IT L+ K+ +
Sbjct: 697 GFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCSEITGNLLKKKLRVQEQ 754
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
++ LP++ + + + V L+ANHCPG+ +ILF+ NG +LHTGDFR M S L
Sbjct: 755 YIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILHTGDFRADPSM-ERSRL 813
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLF 578
+HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L + G+Y IGKE++F
Sbjct: 814 AGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVF 873
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
L +A VL K+ ++ K++ L+CL+ E TT+ +S +H++PM + +FK L+
Sbjct: 874 LAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCDSLVHLLPMMQI-NFKGLQSH 931
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFVK 697
+ G++ I+AF PTGWT S + Q +G I Y +PYSEH S+ E+K FV+
Sbjct: 932 LKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGIPYSEHSSYLEMKRFVQ 991
Query: 698 FVSPEHIIPSVNNDGRDSANAM 719
++ P+ IIP+VN S N M
Sbjct: 992 WLKPQKIIPTVNVGSFRSRNTM 1013
Score = 49 (22.3 bits), Expect = 1.8e-70, Sum P(2) = 1.8e-70
Identities = 10/25 (40%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + Q H CLD
Sbjct: 121 CPSCQMPFSSLLGQTPQWHVFECLD 145
Score = 37 (18.1 bits), Expect = 3.3e-69, Sum P(2) = 3.3e-69
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 187 RQAHTNNCLDKCENQAQDVVFPKHE 211
+ H NNC + + KH+
Sbjct: 20 KPVHPNNCSENISESVEKSTDGKHQ 44
>UNIPROTKB|I3LAK7 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
EMBL:CU424456 Ensembl:ENSSSCT00000023797
GeneTree:ENSGT00530000063183 GO:GO:0016787 InterPro:IPR001279
InterPro:IPR011084 Pfam:PF07522 SMART:SM00849 Uniprot:I3LAK7
Length = 956
Score = 683 (245.5 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 153/382 (40%), Positives = 230/382 (60%)
Query: 335 KPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRK--HKDI 392
K A K ++D L + N+ + P+ S SR+S R K + Q RK +
Sbjct: 561 KRKAEKSLSDLELEA-KNLNE-GQPSVELS-SRRSQRQRKRLKKSDSLQEGVRKLRKRTC 617
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL+++F +YCS +T L+
Sbjct: 618 PFYKKIPGTGFTVDAFQYGVVEG-CTAYFLTHFHSDHYAGLSKNFTF-PVYCSEVTGNLL 675
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
K+ + + LP++ + + G+ V L+ANHCPG++++LF NG +LHTGDFR
Sbjct: 676 KSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGAVMVLFHLPNGHVILHTGDFRAD 735
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGS 569
M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP TL + G+
Sbjct: 736 PTM-ERSLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPHTLVVCGT 794
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
Y+IGKE++FL +A VL K+ ++ K+ L+CL+ + + + TT+ S +H++PM +
Sbjct: 795 YSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIPEIN-SFITTDMCNSLVHLLPMMQI 853
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ--GTIIRYEVPYSEHC 687
+FK L++ ++ G+++ I+AF PTGWT S K S Q G I Y +PYSEH
Sbjct: 854 -NFKGLQNHLKKFGGKYNQILAFRPTGWTHSN-KLTSIADVLPQTKGNISIYGIPYSEHS 911
Query: 688 SFTELKEFVKFVSPEHIIPSVN 709
S+ E+K FV+++ P IIP+VN
Sbjct: 912 SYPEMKRFVQWLKPRIIIPTVN 933
Score = 48 (22.0 bits), Expect = 2.3e-70, Sum P(2) = 2.3e-70
Identities = 25/109 (22%), Positives = 38/109 (34%)
Query: 100 HSPECEEI--KEILKVNEG-YL--RNSVESRLLRPRAADCRLXXXXXXXXXDAVLDVLLK 154
HS C E K + K +G Y RN + R + + + D + +
Sbjct: 24 HSNNCSENIPKSVEKATDGKYQSKRNRNKKRTVEETNSQTSVASSQNSSCEDGIQQCQDR 83
Query: 155 LCDKNDVNCNK-IDESVR------CPLCGIDISDLNEELRQAHTNNCLD 196
+ NK + VR CP C + S L + + H CLD
Sbjct: 84 ETTPRKTHKNKHVSPKVRPVYDGYCPNCQMPFSSLLGQTPRWHVFECLD 132
>UNIPROTKB|E1BN11 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006289 "nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 EMBL:DAAA02059252 EMBL:DAAA02059253
IPI:IPI00712829 RefSeq:XP_002698556.1 RefSeq:XP_580486.2
UniGene:Bt.37962 Ensembl:ENSBTAT00000026896 GeneID:504377
KEGG:bta:504377 NextBio:20866632 Uniprot:E1BN11
Length = 1051
Score = 672 (241.6 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 161/443 (36%), Positives = 244/443 (55%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ E ES +S+ GS +R K++ + G K +
Sbjct: 611 KRKAEKSLSDLELEAKNLSESQPSVELSDKGSQRQ--KKRLKKSDSLQEGGHQKNPGHLK 668
Query: 342 ITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGT 401
T + N+ K T G + + K + + + RK + P + +PGT
Sbjct: 669 KT---VPRTVNLSKDKTFIKSAHGRVQR---ENTKISESSNAGELRK-RTCPFYKKIPGT 721
Query: 402 PFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
F VDAF+Y + G C+ +FLTHFH DHY GL+++F IYCS IT L+ K+ +
Sbjct: 722 GFTVDAFQYGWVEG-CTAYFLTHFHSDHYAGLSKNFTF-PIYCSKITGNLLKSKLHVQEQ 779
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ LP + + + GI V L+ANHCPG+++ILF NG +LHTGDFR M S+L
Sbjct: 780 YIHPLPTDTECIVNGIKVILLDANHCPGAVMILFCLPNGHVILHTGDFRADPSM-ERSLL 838
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLF 578
+HTL LDTTYC+P Y FP Q+ VIQF I A + + NP+ L + G+Y+IGKE++F
Sbjct: 839 GCHKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPRALVVCGTYSIGKEKIF 898
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
L +A VL K+ ++ K+ L+C + E + TT+ S +H++PM + +FK L++
Sbjct: 899 LAIADVLGSKVGMSKEKYNTLQCFNIP-EVSSFITTDMCNSLVHLLPMMQI-NFKGLQNH 956
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ--GTIIRYEVPYSEHCSFTELKEFV 696
+ G+++ I+AF PTGWT S K S Q G I Y +PYSEH S+ E+K FV
Sbjct: 957 LKKCGGKYNQILAFRPTGWTHSN-KLTSLADIIPQTKGNISIYGIPYSEHSSYLEMKRFV 1015
Query: 697 KFVSPEHIIPSVNNDGRDSANAM 719
+++ P+ IIP+VN S M
Sbjct: 1016 QWLKPQKIIPTVNVGSLKSRRTM 1038
Score = 46 (21.3 bits), Expect = 9.3e-68, Sum P(2) = 9.3e-68
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 4 KRTVSQPISTAYDDDDFQV-PLSQTPKFTT 32
KR VS AY DDDF + P + +FT+
Sbjct: 403 KRIVSHG-HPAYTDDDFMLLPPALAERFTS 431
Score = 44 (20.5 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 124 CPNCQMPFSSLLGQTPRWHVFECLD 148
Score = 43 (20.2 bits), Expect = 1.9e-67, Sum P(2) = 1.9e-67
Identities = 19/79 (24%), Positives = 33/79 (41%)
Query: 146 DAVLDVLLKLCDKNDVNCNKIDESVRCPL-----CGIDISDLNEELRQAHTNNCLDKCEN 200
D ++ V L L ++ D N ++ P C I S L + TN DK ++
Sbjct: 274 DKLVGVGLPLAEELDSQNNPEHRNLPLPENDFSNCEISYSPLQSDEETYDTN---DKLDD 330
Query: 201 QAQDVVFPKHERGPRLEPE 219
Q++ F + + LE +
Sbjct: 331 SQQELFFMESSKDGNLEED 349
Score = 38 (18.4 bits), Expect = 1.3e-69, Sum P(3) = 1.3e-69
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 300 VESNKDAHVSNDGSSS 315
+ES+KD ++ D +SS
Sbjct: 338 MESSKDGNLEEDDNSS 353
>UNIPROTKB|Q6PJP8 [details] [associations]
symbol:DCLRE1A "DNA cross-link repair 1A protein"
species:9606 "Homo sapiens" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001279 SMART:SM00849
EMBL:D42045 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067 EMBL:CH471066
GO:GO:0016787 GO:GO:0006289 EMBL:AL592546 eggNOG:COG1236 CTD:9937
HOGENOM:HOG000168450 HOVERGEN:HBG081418 KO:K15340 OrthoDB:EOG4F4SB1
InterPro:IPR011084 Pfam:PF07522 EMBL:AY607842 EMBL:BC013124
EMBL:BC062582 IPI:IPI00478916 RefSeq:NP_001258745.1
RefSeq:NP_055696.3 UniGene:Hs.1560 PDB:4B87 PDBsum:4B87
ProteinModelPortal:Q6PJP8 SMR:Q6PJP8 STRING:Q6PJP8
PhosphoSite:Q6PJP8 DMDM:311033461 PaxDb:Q6PJP8 PRIDE:Q6PJP8
Ensembl:ENST00000361384 Ensembl:ENST00000369305 GeneID:9937
KEGG:hsa:9937 UCSC:uc001law.2 GeneCards:GC10M115584 HGNC:HGNC:17660
HPA:HPA036907 MIM:609682 neXtProt:NX_Q6PJP8 PharmGKB:PA27174
InParanoid:Q6PJP8 OMA:ECPDGLL GenomeRNAi:9937 NextBio:37488
Bgee:Q6PJP8 CleanEx:HS_DCLRE1A Genevestigator:Q6PJP8
GermOnline:ENSG00000198924 Uniprot:Q6PJP8
Length = 1040
Score = 681 (244.8 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 156/432 (36%), Positives = 245/432 (56%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ + S ES +S++ S ++ S + +G+ + ++ L
Sbjct: 600 KRKAEKSLSDLEFDASTLHESQLSVELSSERSQR---QKKRCRKSNSLQEGACQKRSDHL 656
Query: 342 ITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGT 401
I N+ KV T G + G+ KK G + K P + +PGT
Sbjct: 657 INTE--SEAVNLSKVKVFTKSAHGGLQR--GN--KKIPESSNVGGSRKKTCPFYKKIPGT 710
Query: 402 PFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS IT L+ K+ +
Sbjct: 711 GFTVDAFQYGVVEG-CTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKLHVQEQ 768
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ LPL+ + + G+ V L+ANHCPG+++ILF NG +LHTGDFR M S+L
Sbjct: 769 YIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSM-ERSLL 827
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLF 578
+H L LDTTYC+P Y FP Q+ VI+F I A +A + NP L + G+Y+IGKE++F
Sbjct: 828 ADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVF 887
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
L +A VL K+ ++ K++ L+CL+ + + TT+ S +H++PM + +FK L+
Sbjct: 888 LAIADVLGSKVGMSQEKYKTLQCLNIPEIN-SLITTDMCSSLVHLLPMMQI-NFKGLQSH 945
Query: 639 SNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVK 697
+ G+++ I+AF PTGWT S K + + +G I Y +PYSEH S+ E+K FV+
Sbjct: 946 LKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQ 1005
Query: 698 FVSPEHIIPSVN 709
++ P+ IIP+VN
Sbjct: 1006 WLKPQKIIPTVN 1017
Score = 44 (20.5 bits), Expect = 1.2e-68, Sum P(2) = 1.2e-68
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 172 CPLCGIDISDLNEELRQAHTNNCLD 196
CP C + S L + + H CLD
Sbjct: 122 CPNCQMPFSSLIGQTPRWHVFECLD 146
>UNIPROTKB|E2QZ29 [details] [associations]
symbol:DCLRE1A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005730 GO:GO:0016787 GO:GO:0006289 CTD:9937 KO:K15340
InterPro:IPR011084 Pfam:PF07522 OMA:ECPDGLL
GeneTree:ENSGT00530000063183 InterPro:IPR008996 SUPFAM:SSF50353
EMBL:AAEX03015537 RefSeq:XP_535018.3 Ensembl:ENSCAFT00000017779
GeneID:477824 KEGG:cfa:477824 NextBio:20853244 Uniprot:E2QZ29
Length = 1049
Score = 668 (240.2 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 159/433 (36%), Positives = 245/433 (56%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ + ES VSN+ +R K++ + +G+ + ++ L
Sbjct: 610 KRKAEKSLSDLEFDAKNLNESQPSVEVSNERPQR---RKRLKKSDS-LEEGTPQKRSHHL 665
Query: 342 I-TDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPG 400
T+ N+KK G + + K + + + RK K P + +PG
Sbjct: 666 NRTE---SKTVNLKKDKVSIKSACGRLQR---GNMKIPESPNAGQLRK-KTCPFYKKIPG 718
Query: 401 TPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
T F VDAF+Y L C+ +FLTHFH DHY GL+++F +YCS IT L+ K+ +
Sbjct: 719 TGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEITGNLLKSKLHVQKQ 777
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ LP++ + + G+ V L+ANHCPG+++ILF NG +LHTGDFR M S L
Sbjct: 778 YIHPLPMDTECIVNGVKVVLLDANHCPGAVMILFYLPNGNVLLHTGDFRADPTM-ERSRL 836
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLF 578
+HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L + G+Y+IGKE++F
Sbjct: 837 AGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTRNPRVLVVCGTYSIGKEKVF 896
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF-TTNEHESHIHVMPMWTLASFKRLKH 637
L +A VL ++ ++ K++ L+CL+ D+ F TT+ S +H++PM + +FK L+
Sbjct: 897 LAIADVLGSRVAMSQEKYKTLQCLNIP--DLNSFITTDMCNSLVHLLPMMQI-NFKALQS 953
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFV 696
+ G F+ I+AF PTGWT S Q +G I Y +PYSEH S+ ELK FV
Sbjct: 954 HLKKCGGEFNQILAFRPTGWTHSNQLTNIRDIVPQIKGNISIYGIPYSEHSSYLELKRFV 1013
Query: 697 KFVSPEHIIPSVN 709
+++ P+ IIP+VN
Sbjct: 1014 QWLKPQKIIPTVN 1026
>DICTYBASE|DDB_G0277755 [details] [associations]
symbol:dclre1 "DNA repair metallo-beta-lactamase
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0006289
"nucleotide-excision repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
dictyBase:DDB_G0277755 GO:GO:0005634 GenomeReviews:CM000151_GR
EMBL:AAFI02000022 GO:GO:0008408 GO:GO:0006289 eggNOG:COG1236
KO:K15340 InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_642494.1
HSSP:Q9UPQ7 ProteinModelPortal:Q86KS1 EnsemblProtists:DDB0232254
GeneID:8621205 KEGG:ddi:DDB_G0277755 InParanoid:Q86KS1
Uniprot:Q86KS1
Length = 920
Score = 577 (208.2 bits), Expect = 2.2e-55, P = 2.2e-55
Identities = 131/354 (37%), Positives = 199/354 (56%)
Query: 368 KSFSGSDRKKHAAKDQSKGRKHKDIP-TWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMD 426
K + KK + + K K IP ++ + GT F VD F+Y D +H+FLTHFH D
Sbjct: 235 KKTGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTHFHSD 294
Query: 427 HYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCP 486
HY G+T+++ G IYC+ T +LV+ K+G+ + N+ I G+ V L++NHCP
Sbjct: 295 HYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDSNHCP 354
Query: 487 GSIIILFE-PQNGK--------AVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
GS +ILF P K ++LHTGDFR+++ M + +L+ I L LD TYC+P
Sbjct: 355 GSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTYCDPQ 414
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR 597
Y FP Q +I+ V ++ E+ + +TLFL G+Y IGKER+ LE+A+ K ++V+ K+
Sbjct: 415 YVFPPQPEIIKQVASIVRKEN-DGETLFLFGTYVIGKERILLEIAKQEGKPVHVSNEKYA 473
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW 657
+L CL DI FTTNE + + M ++ S+ + + + ++ ++ F PTGW
Sbjct: 474 ILCCLSTCL-DINKFTTNELITPFRAVTM-SMLSYHNMLSLLDSSNNKYKRVIGFRPTGW 531
Query: 658 TFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
T +K KS +G Y V YSEH SF EL++ + P IIP+V+ D
Sbjct: 532 TQAK---KSI-TYLNRGPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCD 581
>POMBASE|SPAC22A12.01c [details] [associations]
symbol:pso2 "DNA 5' exonuclease (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003684 "damaged DNA
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001279 SMART:SM00849
PomBase:SPAC22A12.01c GO:GO:0005634 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003684 GO:GO:0006281
eggNOG:COG1236 GO:GO:0008409 KO:K15340 InterPro:IPR011084
Pfam:PF07522 PIR:T38927 RefSeq:NP_593231.2
ProteinModelPortal:Q10264 STRING:Q10264
EnsemblFungi:SPAC22A12.01c.1 GeneID:2541503 KEGG:spo:SPAC22A12.01c
OMA:SEHSSFK OrthoDB:EOG4M68SB NextBio:20802602 Uniprot:Q10264
Length = 560
Score = 450 (163.5 bits), Expect = 7.0e-54, Sum P(3) = 7.0e-54
Identities = 104/275 (37%), Positives = 157/275 (57%)
Query: 392 IPTWCCVP-GTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+P + +P PF VDAF Y D +FL+HFH DHY GLT + HG IYCS +T L
Sbjct: 183 VPFYKLMPYNIPFAVDAFAYGAIDGVEAYFLSHFHSDHYGGLTPKWKHGPIYCSEVTGNL 242
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEP-QNGKA--VLHTGD 506
+ + + ++ L LNQ I GI V L+ANHCPGS + +FE Q+ + VLH GD
Sbjct: 243 LINVMHVDEQYVKRLKLNQPYNIMGITVYVLDANHCPGSAMFVFETLQSNQTRRVLHCGD 302
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAE-SFNPKTL 564
FR S++ VL+ IH + LDTTY NP Y FP Q V+Q + AI + S + + L
Sbjct: 303 FRASKDHVMHPVLREKTIHKVYLDTTYLNPKYTFPPQADVVQACADKAISIKKSTDSRLL 362
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
++ +Y+IGKE++ + +A+ L +IYV K ++K L+ +++ I T + ++ +H++
Sbjct: 363 VVVSTYSIGKEKVAVAIAKSLSSRIYVVPRKMHIIKQLE-NQDLIDLLTDDPTQASVHMV 421
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
M + L ++ QY F I+ + TGWTF
Sbjct: 422 TMMGIHPNSLLDYLE-QYNSSFDKIIGYKVTGWTF 455
Score = 77 (32.2 bits), Expect = 7.0e-54, Sum P(3) = 7.0e-54
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ + PYSEH SF +L F ++ HIIP+VN + S M
Sbjct: 493 VAAFVAPYSEHSSFYDLTMFCLSMNIGHIIPTVNVGSQRSREKM 536
Score = 71 (30.1 bits), Expect = 7.0e-54, Sum P(3) = 7.0e-54
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 146 DA-VLDVLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAHTNNCLD 196
DA +L+ L KN+ + + E + CP+CGI + L + H N+CLD
Sbjct: 84 DANILEPLKNELVKNEEST--MSELLLCPICGITLESLTVDAN-IHVNDCLD 132
>FB|FBgn0037338 [details] [associations]
symbol:Snm1 "Snm1" species:7227 "Drosophila melanogaster"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR001279 SMART:SM00849
EMBL:AE014297 GO:GO:0016787 eggNOG:COG1236 KO:K15340
InterPro:IPR011084 Pfam:PF07522 GeneTree:ENSGT00530000063183
EMBL:AY058585 RefSeq:NP_649548.1 UniGene:Dm.13655 SMR:Q9VND2
MINT:MINT-1328399 STRING:Q9VND2 EnsemblMetazoa:FBtr0078688
GeneID:40669 KEGG:dme:Dmel_CG10018 UCSC:CG10018-RA CTD:40669
FlyBase:FBgn0037338 InParanoid:Q9VND2 OMA:QPSISTF OrthoDB:EOG47H451
GenomeRNAi:40669 NextBio:819942 Uniprot:Q9VND2
Length = 763
Score = 528 (190.9 bits), Expect = 1.2e-50, P = 1.2e-50
Identities = 122/355 (34%), Positives = 199/355 (56%)
Query: 366 SRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHF 423
+++S G + KK + Q RK K P + V GT F VD F++ + G +H+FLTHF
Sbjct: 241 TKESPLGKNSKKGTVRKQ---RKPKPCPPYKVVEGTSFCVDGFQFGEIEG-VTHYFLTHF 296
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHY GLT+ F H +Y S I+ARLV I + + + ++Q + G+ VT LEAN
Sbjct: 297 HADHYIGLTKKFCH-PLYVSPISARLVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEAN 355
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPK 542
HCPG+++ F+ +G+ +LHTGDFR S +M S+ + I L LDTTY N YDF
Sbjct: 356 HCPGALMFFFKLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCH 415
Query: 543 QEAVIQFVIEAIQA--ESFNPKTLFLI-GSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
Q + ++ ++A E K + ++ GSY IGKE+++L +A+ +++ + + +
Sbjct: 416 QSESVDRAVDLVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAV 475
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
+CL++ D T + +++HV+ M + S+ L ++ ++ +++ P+GW
Sbjct: 476 RCLNWPDLD-SVLTEDRSGANLHVIAMGKI-SYPSLVDYFTEFEDQYDMLLGIRPSGW-- 531
Query: 660 SKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
K K S G+R I + YSEH S+ EL+ FV+F+ P+ +I +V GRD
Sbjct: 532 EKNSKPSYGKR-----ISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV-GRD 580
>SGD|S000004745 [details] [associations]
symbol:PSO2 "Nuclease required for DNA single- and
double-strand break repair" species:4932 "Saccharomyces cerevisiae"
[GO:0006302 "double-strand break repair" evidence=TAS] [GO:0090305
"nucleic acid phosphodiester bond hydrolysis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC;IDA] [GO:0003684 "damaged DNA
binding" evidence=IMP] [GO:0008409 "5'-3' exonuclease activity"
evidence=IMP;IDA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0036297 "interstrand cross-link repair" evidence=IGI;IMP]
SGD:S000004745 GO:GO:0005634 GO:GO:0046872 GO:GO:0003684
EMBL:BK006946 GO:GO:0006302 eggNOG:COG1236 GO:GO:0036297
EMBL:Z47071 GO:GO:0008409 KO:K15340 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 OMA:SEHSSFK OrthoDB:EOG4M68SB
EMBL:X64004 EMBL:X76917 PIR:S19646 RefSeq:NP_013857.1
ProteinModelPortal:P30620 DIP:DIP-6301N IntAct:P30620
MINT:MINT-699963 STRING:P30620 PaxDb:P30620 EnsemblFungi:YMR137C
GeneID:855168 KEGG:sce:YMR137C CYGD:YMR137c HOGENOM:HOG000115743
NextBio:978602 Genevestigator:P30620 GermOnline:YMR137C
Uniprot:P30620
Length = 661
Score = 286 (105.7 bits), Expect = 1.0e-39, Sum P(5) = 1.0e-39
Identities = 82/234 (35%), Positives = 122/234 (52%)
Query: 344 DFFLGSITNVKKVSTPT-NGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVP--- 399
D +GS + + TP N +S S + K+ A + R +P++ +
Sbjct: 167 DTCIGS--DPSNMGTPKKNIRSFISNPSSPAKTKRDIATSKKPTRVKLVLPSFKIIKFNN 224
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHHGK-------IYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP--QNG-----KAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF+ N + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMASMS---VLQTC--PIHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
TGDFR + +M + +T I + LDTTY Y+FP Q +V + V +
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVAD 398
Score = 166 (63.5 bits), Expect = 1.0e-39, Sum P(5) = 1.0e-39
Identities = 39/118 (33%), Positives = 65/118 (55%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYV--NAAKFRVLKCL--DFSKEDIQW----FT 613
+ LFL+G+YTIGKE+L +++ L+ K++V N+ KF ++ + + ++ W T
Sbjct: 434 RVLFLVGTYTIGKEKLAIKICEFLKTKLFVMPNSVKFSMMLTVLQNNENQNDMWDESLLT 493
Query: 614 TNEHESHIHVMPMWTLAS-------FKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK 664
+N HES +H++P+ L S K LK + Y +V F PTGW+ + G K
Sbjct: 494 SNLHESSVHLVPIRVLKSQETIEAYLKSLKELETDYVKDIEDVVGFIPTGWSHNFGLK 551
Score = 72 (30.4 bits), Expect = 1.0e-39, Sum P(5) = 1.0e-39
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ VPYSEH SF +L +F + +IP+VN
Sbjct: 604 FNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 634
Score = 60 (26.2 bits), Expect = 1.0e-39, Sum P(5) = 1.0e-39
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 158 KNDVNCNKIDESVRCPLCGIDISDLNEELRQAHTNNCL 195
+ VN E ++CP+C ++S L R+ H + C+
Sbjct: 133 EEQVNVKVSTEVIQCPICLENLSHLELYERETHCDTCI 170
Score = 37 (18.1 bits), Expect = 1.0e-39, Sum P(5) = 1.0e-39
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 89 CTRPTACVDIDHSPECEEIKEILKVNEGYLRNSVESRLL 127
C TA V+I + EE+ + + N E R++
Sbjct: 91 CLEDTAKVEITIDTDEEELVSLHDNEVSAIENRTEDRIV 129
>ASPGD|ASPL0000068746 [details] [associations]
symbol:AN10962 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
EMBL:BN001304 InterPro:IPR011084 Pfam:PF07522
EnsemblFungi:CADANIAT00000700 HOGENOM:HOG000166938 OMA:FCCALRI
Uniprot:C8VBT0
Length = 832
Score = 247 (92.0 bits), Expect = 4.9e-36, Sum P(4) = 4.9e-36
Identities = 56/132 (42%), Positives = 78/132 (59%)
Query: 400 GTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G VDAF+Y + C+ +FL+HFH DHY GL++S+ HG IYCS TA LV ++ +
Sbjct: 401 GFSISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLKVDP 460
Query: 459 DRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEP--QNGKA-----VLHTGDFR 508
+ L +KT + G+ VT +EANHCPGS I LFE +G + VLH GDFR
Sbjct: 461 KWVVDLDFEKKTEVPGTGGVQVTMIEANHCPGSAIFLFEKAVSSGASTRIQRVLHCGDFR 520
Query: 509 FSEEMASMSVLQ 520
S + ++L+
Sbjct: 521 ASPQHVQHALLR 532
Score = 165 (63.1 bits), Expect = 4.9e-36, Sum P(4) = 4.9e-36
Identities = 42/137 (30%), Positives = 68/137 (49%)
Query: 523 PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVA 582
P T T NP+ F A V + Q E + L +IG+Y+IGKER+ L +A
Sbjct: 593 PFQTATPTTKSKNPISKF--MSAATAAVKPSTQPEP-KGRLLVVIGTYSIGKERICLAIA 649
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQY 642
R L+ KIY AK RV CL+ E T + ++ +H+ ++ + + ++ +
Sbjct: 650 RALKSKIYATPAKQRVCACLE-DPELSALLTDDPLQAQVHMQTLFEIRAETLCDYLDSMK 708
Query: 643 AGRFSLIVAFSPTGWTF 659
F+ ++ F PTGWT+
Sbjct: 709 P-HFTRVIGFRPTGWTY 724
Score = 76 (31.8 bits), Expect = 4.9e-36, Sum P(4) = 4.9e-36
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 157 DKNDVNCNKI--DESVRCPLCGIDISDLNEELRQAHTNNCLD 196
D ND + I DE CP+C + +E AH N+CLD
Sbjct: 285 DANDTTADTIHADEKPTCPVCQGSLEGFDEMKVMAHVNDCLD 326
Score = 75 (31.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 24/64 (37%), Positives = 30/64 (46%)
Query: 501 VLHTGDFRFSEEMASMSVLQ---TCP---------IHTLILDTTYCNPLYDFPKQEAVIQ 548
VLH GDFR S + ++L+ P I LDTTY +P Y FP+Q VI
Sbjct: 513 VLHCGDFRASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDVIN 572
Query: 549 FVIE 552
E
Sbjct: 573 ACAE 576
Score = 74 (31.1 bits), Expect = 4.9e-36, Sum P(4) = 4.9e-36
Identities = 18/41 (43%), Positives = 22/41 (53%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ VPYSEH SF EL F + IIP+VN + S M
Sbjct: 768 FGVPYSEHSSFRELTMFCCALRIGRIIPTVNVGSQKSRERM 808
>UNIPROTKB|Q5QJC3 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9031 "Gallus
gallus" [GO:0006281 "DNA repair" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005813 "centrosome" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0008409 "5'-3' exonuclease activity" evidence=ISS] [GO:0031848
"protection from non-homologous end joining at telomere"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] [GO:0031627
"telomeric loop formation" evidence=ISS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0005813 GO:GO:0006281
GO:GO:0031848 GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118
GO:GO:0031860 GO:GO:0031627 EMBL:AY376897 IPI:IPI00585177
RefSeq:NP_001026671.2 UniGene:Gga.12786 ProteinModelPortal:Q5QJC3
STRING:Q5QJC3 GeneID:428269 KEGG:gga:428269 CTD:64858
HOVERGEN:HBG081419 InParanoid:Q5QJC3 KO:K15341 OrthoDB:EOG43R3N5
NextBio:20829309 Uniprot:Q5QJC3
Length = 457
Score = 318 (117.0 bits), Expect = 3.7e-32, Sum P(2) = 3.7e-32
Identities = 81/245 (33%), Positives = 128/245 (52%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+PGTP VD + R G +FL+H H DH GL+ ++ +YCS +TARL++ ++ +
Sbjct: 6 IPGTPIAVDFWSVRRAGGARLFFLSHMHSDHTVGLSSTWSR-PLYCSPLTARLLHHRLKV 64
Query: 457 PWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
P ++ L + Q + + VT L+ANHCPGS++ LFE G +L+TGDFR+S M
Sbjct: 65 PTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFG-TILYTGDFRYSPAMQR 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
L I L LD T C P P + ++A Q +P+ +IG Y++GKE
Sbjct: 124 EPALSGRRIDRLYLDNTNCRPHGALPSRSRA---ALQAAQLIRRHPQHRVVIGVYSLGKE 180
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM----W-TLA 630
L +++A + V+ ++ ++ L+ + FTT E IH + + W TL
Sbjct: 181 ELLVDLALEFGTWVVVSPSRLEQMRLLELPEV----FTTEEGAGRIHAVDVAEIRWDTLV 236
Query: 631 SFKRL 635
S+ L
Sbjct: 237 SWNVL 241
Score = 93 (37.8 bits), Expect = 3.7e-32, Sum P(2) = 3.7e-32
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
+PYS+H SF+EL EFVK++ P +IP V D
Sbjct: 264 IPYSDHSSFSELCEFVKWLKPCSVIPIVKGD 294
>GENEDB_PFALCIPARUM|PF14_0711 [details] [associations]
symbol:PF14_0711 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 EMBL:AE014187
InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_001348885.1
ProteinModelPortal:Q8IK95 EnsemblProtists:PF14_0711:mRNA
GeneID:812293 KEGG:pfa:PF14_0711 EuPathDB:PlasmoDB:PF3D7_1474300
HOGENOM:HOG000282173 ProtClustDB:CLSZ2431799 Uniprot:Q8IK95
Length = 860
Score = 222 (83.2 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 54/157 (34%), Positives = 82/157 (52%)
Query: 404 RVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV 463
R+ K R C +FLTHFH DHY + + F+ ++CS IT +L+ I + +
Sbjct: 30 RISEDKEKRKICRIFFLTHFHADHYTNINKYFNEN-VFCSQITKKLLVNIIEVQDKYVHN 88
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP 523
L +N+ + V ++ANHCPGS+II FE +NG ++HTGDFR+S + S + +
Sbjct: 89 LKINKIYYLFNFKVAFIDANHCPGSVIIYFEFKNGTKIIHTGDFRYSN-IQSFLIKKLLS 147
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
D + C + K E +I+ E I ES N
Sbjct: 148 YSG---DISICT----YKKNEMIIKGEQEDINRESIN 177
Score = 209 (78.6 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 57/187 (30%), Positives = 96/187 (51%)
Query: 530 DTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK 588
DT Y N +++ + ++ +V E + E KTLFL G+Y +GKE+++L ++ K
Sbjct: 596 DTKYSNIHMHEKVNKLDLLTYVNEDKKGEQIKKKTLFLFGTYNLGKEKIYLSLSDACNMK 655
Query: 589 IYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASF----KR--LKHMSNQ 641
IY N K ++++ ++K + T N+ E+ IH++ + F KR L + +
Sbjct: 656 IYYKNEKKRKIIESFLYNKHILNKITDNKLEAQIHIVDINYSYIFPKIDKRKFLNLIDEE 715
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
F PTGW KK S +++ I + +PYSEH + ELK FVK + P
Sbjct: 716 IEKEFDSFYYIIPTGWV----KKFS---FYERNNISIFLIPYSEHSNLDELKNFVKSIKP 768
Query: 702 EHIIPSV 708
+I+P+V
Sbjct: 769 CNILPTV 775
Score = 48 (22.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
I E+ KT++L +Y + K LF ++ IYV K R+L
Sbjct: 465 ISEETNYIKTIYLDTTYALSKNNLFAPQMYLINYVIYV--CKKRLL 508
Score = 44 (20.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 293 KKEYSRAVESNKDAHVSNDGSSSYHGSERHKE 324
K+E ++ N S YH E+ KE
Sbjct: 214 KEEGENQIDGEDRISGGNHNSGEYHSEEKKKE 245
Score = 39 (18.8 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 283 KKILHTLCEIKKEYSRAVESNKDAHVSN 310
KK+L + E++ +Y ++ NK ++ N
Sbjct: 72 KKLLVNIIEVQDKYVHNLKINKIYYLFN 99
Score = 38 (18.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSK 335
R+ I + +K++ + ++N D +V + E+ KE + +DG +
Sbjct: 173 RESINENIYREEKKFDKNQKNNIDLNVDLNCIIIKKEKEKKKEEGENQIDGEDR 226
>UNIPROTKB|Q8IK95 [details] [associations]
symbol:PF14_0711 "DNA repair metallo-beta-lactamase
protein, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 GO:GO:0016787
EMBL:AE014187 InterPro:IPR011084 Pfam:PF07522 RefSeq:XP_001348885.1
ProteinModelPortal:Q8IK95 EnsemblProtists:PF14_0711:mRNA
GeneID:812293 KEGG:pfa:PF14_0711 EuPathDB:PlasmoDB:PF3D7_1474300
HOGENOM:HOG000282173 ProtClustDB:CLSZ2431799 Uniprot:Q8IK95
Length = 860
Score = 222 (83.2 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 54/157 (34%), Positives = 82/157 (52%)
Query: 404 RVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV 463
R+ K R C +FLTHFH DHY + + F+ ++CS IT +L+ I + +
Sbjct: 30 RISEDKEKRKICRIFFLTHFHADHYTNINKYFNEN-VFCSQITKKLLVNIIEVQDKYVHN 88
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP 523
L +N+ + V ++ANHCPGS+II FE +NG ++HTGDFR+S + S + +
Sbjct: 89 LKINKIYYLFNFKVAFIDANHCPGSVIIYFEFKNGTKIIHTGDFRYSN-IQSFLIKKLLS 147
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
D + C + K E +I+ E I ES N
Sbjct: 148 YSG---DISICT----YKKNEMIIKGEQEDINRESIN 177
Score = 209 (78.6 bits), Expect = 3.1e-31, Sum P(2) = 3.1e-31
Identities = 57/187 (30%), Positives = 96/187 (51%)
Query: 530 DTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK 588
DT Y N +++ + ++ +V E + E KTLFL G+Y +GKE+++L ++ K
Sbjct: 596 DTKYSNIHMHEKVNKLDLLTYVNEDKKGEQIKKKTLFLFGTYNLGKEKIYLSLSDACNMK 655
Query: 589 IYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASF----KR--LKHMSNQ 641
IY N K ++++ ++K + T N+ E+ IH++ + F KR L + +
Sbjct: 656 IYYKNEKKRKIIESFLYNKHILNKITDNKLEAQIHIVDINYSYIFPKIDKRKFLNLIDEE 715
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
F PTGW KK S +++ I + +PYSEH + ELK FVK + P
Sbjct: 716 IEKEFDSFYYIIPTGWV----KKFS---FYERNNISIFLIPYSEHSNLDELKNFVKSIKP 768
Query: 702 EHIIPSV 708
+I+P+V
Sbjct: 769 CNILPTV 775
Score = 48 (22.0 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
I E+ KT++L +Y + K LF ++ IYV K R+L
Sbjct: 465 ISEETNYIKTIYLDTTYALSKNNLFAPQMYLINYVIYV--CKKRLL 508
Score = 44 (20.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 293 KKEYSRAVESNKDAHVSNDGSSSYHGSERHKE 324
K+E ++ N S YH E+ KE
Sbjct: 214 KEEGENQIDGEDRISGGNHNSGEYHSEEKKKE 245
Score = 39 (18.8 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 283 KKILHTLCEIKKEYSRAVESNKDAHVSN 310
KK+L + E++ +Y ++ NK ++ N
Sbjct: 72 KKLLVNIIEVQDKYVHNLKINKIYYLFN 99
Score = 38 (18.4 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSK 335
R+ I + +K++ + ++N D +V + E+ KE + +DG +
Sbjct: 173 RESINENIYREEKKFDKNQKNNIDLNVDLNCIIIKKEKEKKKEEGENQIDGEDR 226
>UNIPROTKB|F1SBR3 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031860 "telomeric 3' overhang formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005813 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 KO:K15341 GeneTree:ENSGT00530000063183
EMBL:CU651648 RefSeq:XP_003125885.1 UniGene:Ssc.61003
Ensembl:ENSSSCT00000007407 GeneID:100516672 KEGG:ssc:100516672
Uniprot:F1SBR3
Length = 537
Score = 326 (119.8 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 83/237 (35%), Positives = 130/237 (54%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R C+ +FL+H H DH GL+ ++ +YCS ITA L++ +++
Sbjct: 6 IPHTPIAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWCR-PVYCSPITAYLLHRHLQV 64
Query: 455 GIPWDR-LQV-----LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R L+V LPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEVGESHILPLDEVGRET-MTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTC-PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
F+ M LQ PIHTL LD T CNP P Q+ + ++E I+ +P+ I
Sbjct: 123 FTPSMLKEPALQLGKPIHTLYLDNTNCNPALVLPSQQEAARQIVELIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV 232
Score = 77 (32.2 bits), Expect = 3.3e-30, Sum P(2) = 3.3e-30
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+PYS+H SF+EL+ FV + P ++P V+
Sbjct: 271 IPYSDHSSFSELRAFVAALRPCQVVPIVS 299
>UNIPROTKB|F1NF26 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9031 "Gallus
gallus" [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0008409 "5'-3'
exonuclease activity" evidence=IEA] [GO:0031627 "telomeric loop
formation" evidence=IEA] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=IEA] [GO:0031860
"telomeric 3' overhang formation" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005813 GO:GO:0031848 GO:GO:0000781
GO:GO:0000075 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GO:GO:0031860 GO:GO:0031627 IPI:IPI00585177
GeneTree:ENSGT00530000063183 OMA:MAIDAHH EMBL:AADN02045017
EMBL:AADN02045018 Ensembl:ENSGALT00000002953 Uniprot:F1NF26
Length = 459
Score = 300 (110.7 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 79/246 (32%), Positives = 126/246 (51%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHG-KIYCSLITARLVNMKIG 455
+PGTP VD + R G +FL+H H + GL+ ++ +YCS +TARL+ ++
Sbjct: 6 IPGTPIAVDFWSVRRAGGARLFFLSHMHSEKTVGLSSTWSRPLPLYCSPLTARLLYHRLK 65
Query: 456 IPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA 514
+P ++ L + Q + + VT L+ANHCPGS++ LFE G +L+TGDFR+S M
Sbjct: 66 VPTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFG-TILYTGDFRYSPAMQ 124
Query: 515 SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
L I L LD T C P P + ++A Q +P+ +IG Y++GK
Sbjct: 125 REPALSGRRIDRLYLDNTNCRPHGALPSRSRA---ALQAAQLIRRHPQHRVVIGVYSLGK 181
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM----W-TL 629
E L +++A + V+ ++ ++ L+ + FTT E IH + + W TL
Sbjct: 182 EELLVDLALEFGTWVVVSPSRLEQMRLLELPEV----FTTEEGAGRIHAVDVAEIRWDTL 237
Query: 630 ASFKRL 635
S+ L
Sbjct: 238 VSWNVL 243
Score = 93 (37.8 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
+PYS+H SF+EL EFVK++ P +IP V D
Sbjct: 266 IPYSDHSSFSELCEFVKWLKPCSVIPIVKGD 296
>UNIPROTKB|D2H8V8 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9646
"Ailuropoda melanoleuca" [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0031627 "telomeric loop
formation" evidence=ISS] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0006281 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 EMBL:GL192586
HOGENOM:HOG000043118 OMA:KYLLTPV GO:GO:0031860 GO:GO:0031627
Uniprot:D2H8V8
Length = 529
Score = 312 (114.9 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 85/240 (35%), Positives = 131/240 (54%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ + +
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 457 P--WDRL------QVLPLNQ--KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
P W R VLPL++ + T+ VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 65 PKEWIRALEVGESHVLPLDEIGRETMT---VTLMDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFP-KQEAVIQFVIEAIQAESFNPKTL 564
FR++ M L+ IHTL LD T CNP + P +QEA Q ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALKLGKQIHTLYLDNTNCNPAWVLPSRQEAARQ-IVELIRK---HPQHN 176
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 177 IKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTLEEKAGRIHAV 232
Score = 75 (31.5 bits), Expect = 2.3e-28, Sum P(2) = 2.3e-28
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+PYS+H S++EL+ FV + P ++P V+
Sbjct: 271 IPYSDHSSYSELRTFVAALKPCQVVPIVS 299
>UNIPROTKB|A8J921 [details] [associations]
symbol:CHLREDRAFT_176829 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003910 "DNA ligase (ATP) activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005694
"chromosome" evidence=IBA] [GO:0006266 "DNA ligation" evidence=IBA]
[GO:0006273 "lagging strand elongation" evidence=IBA] [GO:0006289
"nucleotide-excision repair" evidence=IBA] InterPro:IPR012308
InterPro:IPR012309 InterPro:IPR012310 Pfam:PF01068 Pfam:PF04675
Pfam:PF04679 PROSITE:PS50160 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0003677 GO:GO:0006310 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0006289 eggNOG:COG1236
KO:K15340 InterPro:IPR011084 Pfam:PF07522 GO:GO:0006273
GO:GO:0003910 Gene3D:1.10.3260.10 SUPFAM:SSF117018 EMBL:DS496145
RefSeq:XP_001698007.1 ProteinModelPortal:A8J921
EnsemblPlants:EDO99592 GeneID:5723644 KEGG:cre:CHLREDRAFT_176829
Uniprot:A8J921
Length = 1384
Score = 223 (83.6 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 46/112 (41%), Positives = 67/112 (59%)
Query: 392 IPTWCCVPGT--PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+P +PGT VDAF+Y +FLTH H DHY GL+ ++ G +YCS +TARL
Sbjct: 35 VPAHKVIPGTGGAVTVDAFRYAHPGVKAYFLTHAHSDHYTGLSEAWCAGPVYCSELTARL 94
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFE--PQNG 498
V G+ L+ LPL + + G ++VT ++ANHCPG++ +LF P+ G
Sbjct: 95 VAHLTGVSTAWLRPLPLGRPVVVEGLVEVTLVDANHCPGAVQLLFRVLPRGG 146
Score = 184 (69.8 bits), Expect = 3.7e-28, Sum P(2) = 3.7e-28
Identities = 68/231 (29%), Positives = 99/231 (42%)
Query: 502 LHTGDFRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
LH GD R+S M S L + LDTTYC P + FP Q+ + +V I +
Sbjct: 191 LHCGDMRYSPAMQSWPQLGAWRGCEGVFLDTTYCQPKHTFPTQDEAVDYVASQIHERT-- 248
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
+ S + RL L V AA FT + S
Sbjct: 249 -GLRIHVSSTKLDVLRLLLPPEPNPDPDAGVAAAA--------------HVFTDDPAASP 293
Query: 621 IHVMPMWTLAS---FKRLKHMSNQYAGRFS---LIVAFSPTGWTFSKGKKKSPGRRWQQG 674
+HV+ TL + R ++ Q A +V F PTGWT+ K+S +G
Sbjct: 294 VHVVGWGTLGETWPYFRPNFVNMQRAAEIMGARCVVGFVPTGWTYEM--KRSVFSVHSKG 351
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN-NDG-RDSANAMVSLL 723
+ + VPYSEH S+ EL E+VK++ P +IP+V +G R+ A ++L
Sbjct: 352 ALSVHLVPYSEHSSYPELLEYVKWLRPRQVIPTVGVKEGDREGERARAAML 402
>MGI|MGI:2156057 [details] [associations]
symbol:Dclre1b "DNA cross-link repair 1B, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO] [GO:0000723 "telomere maintenance"
evidence=ISO] [GO:0000781 "chromosome, telomeric region"
evidence=ISO;IDA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=ISA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISO;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IMP] [GO:0031848 "protection from non-homologous end
joining at telomere" evidence=ISO;IMP] [GO:0031860 "telomeric 3'
overhang formation" evidence=IMP] InterPro:IPR001279 SMART:SM00849
MGI:MGI:2156057 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813
GO:GO:0031848 EMBL:CU210953 GO:GO:0000781 GO:GO:0000075
GO:GO:0006289 eggNOG:COG1236 GO:GO:0008409 InterPro:IPR011084
Pfam:PF07522 OMA:KYLLTPV GO:GO:0031860 GO:GO:0031627 CTD:64858
KO:K15341 OrthoDB:EOG43R3N5 GeneTree:ENSGT00530000063183
HOVERGEN:HBG081420 EMBL:AK046571 EMBL:AK049115 EMBL:AK084347
EMBL:AK134324 EMBL:AK137495 EMBL:AK138568 EMBL:AK154124
EMBL:BC011094 EMBL:BC067017 EMBL:BC125277 IPI:IPI00226917
IPI:IPI00403798 IPI:IPI00458408 RefSeq:NP_001020483.1
RefSeq:NP_598626.2 UniGene:Mm.374850 ProteinModelPortal:Q8C7W7
SMR:Q8C7W7 STRING:Q8C7W7 PRIDE:Q8C7W7 Ensembl:ENSMUST00000029435
Ensembl:ENSMUST00000063502 Ensembl:ENSMUST00000106832
Ensembl:ENSMUST00000106834 GeneID:140917 KEGG:mmu:140917
UCSC:uc008qtl.1 UCSC:uc008qtm.1 UCSC:uc008qto.1 InParanoid:B0V3P0
NextBio:370035 Bgee:Q8C7W7 Genevestigator:Q8C7W7
GermOnline:ENSMUSG00000027845 Uniprot:Q8C7W7
Length = 541
Score = 305 (112.4 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 80/237 (33%), Positives = 127/237 (53%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQET-MTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASM-SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M +++ IHTL LD T CNP P ++ Q +++ I+ F P+ I
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIR--QF-PQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV 232
Score = 81 (33.6 bits), Expect = 4.4e-28, Sum P(2) = 4.4e-28
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Y VPYS+H S++EL+ FV + P ++P V+
Sbjct: 269 YTVPYSDHSSYSELRAFVAALRPCQVVPIVH 299
>UNIPROTKB|E1BFI5 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031860 "telomeric 3' overhang formation" evidence=IEA]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA] [GO:0031627 "telomeric loop formation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0005813 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 GeneTree:ENSGT00530000063183
EMBL:DAAA02007479 IPI:IPI00700462 Ensembl:ENSBTAT00000004713
Uniprot:E1BFI5
Length = 541
Score = 312 (114.9 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 83/237 (35%), Positives = 125/237 (52%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R G +FLTH H DH GLT ++ +YCS ITA L++ +++
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEVGRET-MTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L+ IHTL LD T CNP P QE + ++E I+ +P+ I
Sbjct: 123 YTPSMLKEPALRLGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVELIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
G Y++GKE L +A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV 232
Score = 73 (30.8 bits), Expect = 4.5e-28, Sum P(2) = 4.5e-28
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+PYS+H S++EL+ FV + P ++P V
Sbjct: 271 IPYSDHSSYSELRVFVAALKPCQVVPIV 298
>TAIR|locus:2015939 [details] [associations]
symbol:AT1G27410 "AT1G27410" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC004557
eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522 KO:K15341
EMBL:AY065116 EMBL:AY081629 IPI:IPI00538938 PIR:E86399
RefSeq:NP_174061.1 UniGene:At.28586 ProteinModelPortal:Q9FZJ4
SMR:Q9FZJ4 PRIDE:Q9FZJ4 EnsemblPlants:AT1G27410.1 GeneID:839631
KEGG:ath:AT1G27410 TAIR:At1g27410 HOGENOM:HOG000082912
InParanoid:Q9FZJ4 OMA:MAIDAHH PhylomeDB:Q9FZJ4
ProtClustDB:CLSN2682886 Genevestigator:Q9FZJ4 Uniprot:Q9FZJ4
Length = 422
Score = 319 (117.4 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 99/327 (30%), Positives = 158/327 (48%)
Query: 412 RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKT 470
R +FLTH H DH +GL+ + G +YCS TA L + G L+V+PL T
Sbjct: 12 RNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLSLLRVVPLFSWT 71
Query: 471 TIA------G----IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF----SEEMAS- 515
+++ G + + ++A+HCPGSI+ LF G L+TGDFR+ S+E +
Sbjct: 72 SLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFG-CFLYTGDFRWDSDASDEARTT 130
Query: 516 -MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
++ + P+ L LD TYCNP+Y FP + +Q V + I + +P +I ++GK
Sbjct: 131 LVAAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADIIAS---HPSHDIIIAVDSLGK 187
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA--SF 632
E L + V+R+L KI+V + R + L F +DI FTT+ + + +P ++ + +
Sbjct: 188 EDLLVHVSRILNIKIWVWPERLRTMHLLGF--QDI--FTTDTSLTRVRAVPRYSFSIQTL 243
Query: 633 KRLKHM--------------SNQYAGRFSLIVAF---SPTGWTFSKGKKKSPGRRWQQGT 675
+ L M + G L +F S T S KK+ +
Sbjct: 244 EGLNTMCPTIGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVS-AKKELEAAAVHKFH 302
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPE 702
Y V YS+H + E+ EF+K V P+
Sbjct: 303 DYMYSVHYSDHSCYEEIGEFIKLVKPK 329
>UNIPROTKB|E2RLH4 [details] [associations]
symbol:DCLRE1B "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001279 SMART:SM00849 GO:GO:0016787
InterPro:IPR011084 Pfam:PF07522 OMA:KYLLTPV
GeneTree:ENSGT00530000063183 EMBL:AAEX03010988 EMBL:AAEX03010989
Ensembl:ENSCAFT00000014735 Uniprot:E2RLH4
Length = 463
Score = 305 (112.4 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 84/240 (35%), Positives = 128/240 (53%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ ++ +
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLVHRQLQV 64
Query: 457 P--WDRL------QVLPLNQ--KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
W R VLPL++ + T+ VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 65 SKRWIRALEVGESHVLPLDEIGRETMT---VTLMDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFP-KQEAVIQFVIEAIQAESFNPKTL 564
FR++ M L+ IHTL LD T CNP P +QEA Q ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALKLGKQIHTLYLDNTNCNPARVLPSRQEAARQ-IVELIRK---HPQHN 176
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
IG Y++GKE L ++A R + ++ + +++ L + FT E IH +
Sbjct: 177 IKIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLANV----FTVEEKAGRIHAV 232
Score = 67 (28.6 bits), Expect = 2.0e-27, Sum P(2) = 2.0e-27
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 681 VPYSEHCSFTELKEFVKFVSP-EHIIPSVNNDGRDSANA 718
+PYS+H SF+EL+ FV + P + DG DS A
Sbjct: 271 IPYSDHSSFSELQTFVAALKPCQETADQSQADG-DSKKA 308
>ZFIN|ZDB-GENE-061013-328 [details] [associations]
symbol:dclre1b "DNA cross-link repair 1B"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISS]
[GO:0005813 "centrosome" evidence=ISS] [GO:0008409 "5'-3'
exonuclease activity" evidence=ISS] [GO:0031627 "telomeric loop
formation" evidence=ISS] [GO:0031848 "protection from
non-homologous end joining at telomere" evidence=ISS] [GO:0031860
"telomeric 3' overhang formation" evidence=ISS] [GO:0000075 "cell
cycle checkpoint" evidence=ISS] [GO:0004518 "nuclease activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] InterPro:IPR001279
SMART:SM00849 ZFIN:ZDB-GENE-061013-328 GO:GO:0005634 GO:GO:0005813
GO:GO:0006281 GO:GO:0031848 GO:GO:0000781 GO:GO:0000075
eggNOG:COG1236 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GO:GO:0031860 GO:GO:0031627 CTD:64858 KO:K15341 OrthoDB:EOG43R3N5
EMBL:CT025875 EMBL:BC124809 IPI:IPI00806625 RefSeq:NP_001070751.1
UniGene:Dr.86618 ProteinModelPortal:B0V2S2 STRING:B0V2S2
Ensembl:ENSDART00000099692 GeneID:768137 KEGG:dre:768137
GeneTree:ENSGT00530000063183 HOGENOM:HOG000204482
HOVERGEN:HBG096227 InParanoid:Q08BA3 OMA:NHINIDV NextBio:20918457
Bgee:B0V2S2 Uniprot:B0V2S2
Length = 571
Score = 292 (107.8 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 77/238 (32%), Positives = 126/238 (52%)
Query: 398 VPGTPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD ++ LR C H +FL+H H DH GL+ ++ H IYCS +TA+L+ +K+
Sbjct: 6 LPDTPIAVDCWQ-LR-KCLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL 63
Query: 455 GIPWDRLQVLPLNQKTTIA----G---IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
I ++ L + Q + G + V ++ANHCPG+++ LF+ G L+TGDF
Sbjct: 64 QIKQKWIRPLEIGQDHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFGTR-LYTGDF 122
Query: 508 RFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M + LQ I L LD T C+P P ++ Q + + I+ +P +
Sbjct: 123 RYTPSMLRVPCLQNHINIDVLYLDNTNCDPTRALPSRQQATQQIKQIIRD---HPGYAVV 179
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
IG Y++GKE L +++A + + V+ + L+ L D+ FTT+ I V+
Sbjct: 180 IGLYSLGKESLLVDLAMEFKTWVEVDRERLETLRVLQLP--DV--FTTDSGAGRIRVV 233
Score = 90 (36.7 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
Y VPYS+H S+ EL++FV +SP ++P V N
Sbjct: 270 YVVPYSDHSSYQELEDFVSALSPISLVPIVGN 301
>RGD|1310343 [details] [associations]
symbol:Dclre1b "DNA cross-link repair 1B" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint"
evidence=IEA;ISO;ISS] [GO:0000723 "telomere maintenance"
evidence=ISO;ISS] [GO:0000781 "chromosome, telomeric region"
evidence=IEA;ISO;ISS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA;ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA;ISO;ISS]
[GO:0031627 "telomeric loop formation" evidence=IEA;ISO;ISS]
[GO:0031848 "protection from non-homologous end joining at
telomere" evidence=IEA;ISO;ISS] [GO:0031860 "telomeric 3' overhang
formation" evidence=IEA;ISO;ISS] InterPro:IPR001279 SMART:SM00849
RGD:1310343 GO:GO:0005634 GO:GO:0005737 GO:GO:0005813 GO:GO:0006281
GO:GO:0031848 GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118
GO:GO:0031860 GO:GO:0031627 CTD:64858 HOVERGEN:HBG081419 KO:K15341
OrthoDB:EOG43R3N5 EMBL:BC098939 IPI:IPI00368893
RefSeq:NP_001020858.1 UniGene:Rn.39355 STRING:Q4KLY6 GeneID:310745
KEGG:rno:310745 UCSC:RGD:1310343 InParanoid:Q4KLY6 NextBio:662540
ArrayExpress:Q4KLY6 Genevestigator:Q4KLY6 Uniprot:Q4KLY6
Length = 541
Score = 296 (109.3 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 76/236 (32%), Positives = 124/236 (52%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 457 PWDRLQVLPLNQKTTIA----G---IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
++ L + + + G + VT ++ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 65 SKQWIRALEIGESHVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 510 SEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ M L IHTL LD T CNP P ++ Q +I+ I+ F P+ IG
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIR--QF-PQHNIKIG 180
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 181 LYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV 232
Score = 80 (33.2 bits), Expect = 6.3e-27, Sum P(2) = 6.3e-27
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
Y +PYS+H S++EL+ FV + P ++P V
Sbjct: 269 YSIPYSDHSSYSELRAFVAALRPCQVVPIV 298
>UNIPROTKB|Q9H816 [details] [associations]
symbol:DCLRE1B "5' exonuclease Apollo" species:9606 "Homo
sapiens" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IDA] [GO:0031848
"protection from non-homologous end joining at telomere"
evidence=IMP] [GO:0031860 "telomeric 3' overhang formation"
evidence=ISS] [GO:0031627 "telomeric loop formation" evidence=ISS]
InterPro:IPR001279 SMART:SM00849 GO:GO:0005634 GO:GO:0005737
GO:GO:0005813 GO:GO:0006281 GO:GO:0031848 EMBL:AL137856
GO:GO:0000781 GO:GO:0000075 eggNOG:COG1236 GO:GO:0008409
InterPro:IPR011084 Pfam:PF07522 HOGENOM:HOG000043118 OMA:KYLLTPV
GO:GO:0031860 GO:GO:0031627 CTD:64858 KO:K15341 OrthoDB:EOG43R3N5
EMBL:AK022872 EMBL:AK024060 EMBL:AY849379 EMBL:BC029687
IPI:IPI00010223 RefSeq:NP_073747.1 UniGene:Hs.591412 PDB:3BUA
PDB:3ZDK PDBsum:3BUA PDBsum:3ZDK ProteinModelPortal:Q9H816
SMR:Q9H816 DIP:DIP-42669N IntAct:Q9H816 MINT:MINT-3372972
STRING:Q9H816 PhosphoSite:Q9H816 DMDM:73620756 PaxDb:Q9H816
PRIDE:Q9H816 DNASU:64858 Ensembl:ENST00000369563 GeneID:64858
KEGG:hsa:64858 UCSC:uc001eeg.3 GeneCards:GC01P114447
HGNC:HGNC:17641 MIM:300240 MIM:609683 neXtProt:NX_Q9H816
PharmGKB:PA27175 HOVERGEN:HBG081420 InParanoid:Q9H816
PhylomeDB:Q9H816 EvolutionaryTrace:Q9H816 GenomeRNAi:64858
NextBio:67007 Bgee:Q9H816 CleanEx:HS_DCLRE1B Genevestigator:Q9H816
GermOnline:ENSG00000118655 Uniprot:Q9H816
Length = 532
Score = 295 (108.9 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 82/238 (34%), Positives = 128/238 (53%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ +++
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 455 GIPW-DRLQV-----LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W L+V LPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQET-MTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFP-KQEAVIQFVIEAIQAESFNPKTLFL 566
++ M L IHTL LD T CNP P +QEA Q +++ I+ +P+
Sbjct: 123 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQ-IVQLIRK---HPQHNIK 178
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 179 IGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV 232
Score = 76 (31.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNN---DG-RDSANAMVSLLL 724
+PYS+H S++EL+ FV + P ++P V+ G +DS + +S+ L
Sbjct: 271 IPYSDHSSYSELRAFVAALKPCQVVPIVSRRPCGGFQDSLSPRISVPL 318
>CGD|CAL0005993 [details] [associations]
symbol:orf19.2926 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] InterPro:IPR001279
SMART:SM00849 CGD:CAL0005993 EMBL:AACQ01000017 EMBL:AACQ01000015
GO:GO:0016787 eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522
RefSeq:XP_721154.1 RefSeq:XP_721426.1 ProteinModelPortal:Q5AIC7
GeneID:3636791 GeneID:3637070 KEGG:cal:CaO19.10443
KEGG:cal:CaO19.2926 Uniprot:Q5AIC7
Length = 830
Score = 128 (50.1 bits), Expect = 5.8e-20, Sum P(6) = 5.8e-20
Identities = 34/97 (35%), Positives = 52/97 (53%)
Query: 474 GIDVTCLEANHCPGSIIILFEPQ--NGKA--VLHTGDFRFSEEMASMSVLQTCPI-HT-- 526
G+ VT + ANHCPG+ I FE + K +LH GDFR + E+ + +L+ + H+
Sbjct: 380 GLYVTPITANHCPGAAIFFFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHSKN 439
Query: 527 --------LILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
+ LDTTY +P ++ PKQE V + + Q
Sbjct: 440 NLLQSIDKVYLDTTYMSPKHNLPKQELVCEIMANLFQ 476
Score = 95 (38.5 bits), Expect = 5.8e-20, Sum P(6) = 5.8e-20
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 614 TNEHESHIHVMPMWTLASFKRL-KHMS-NQYAGRFSLIVAFSPTGWTFSK-GKKKSPGRR 670
TN+ + IH++PM +++ + L K+ + N+Y F + PTGW++SK K P ++
Sbjct: 597 TNDSDCMIHLVPMTLVSNNEELSKYFNHNKYYQFFERCIGLCPTGWSYSKIANTKKPNQQ 656
Query: 671 WQQ 673
QQ
Sbjct: 657 QQQ 659
Score = 87 (35.7 bits), Expect = 5.8e-20, Sum P(6) = 5.8e-20
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 405 VDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHHGKIY 441
VDAF + D + +FLTHFH DHY G+++ + + +++
Sbjct: 258 VDAFCFAPHDTINQYFLTHFHADHYGGISKKWAYERVF 295
Score = 87 (35.7 bits), Expect = 5.8e-20, Sum P(6) = 5.8e-20
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
Y VPYSEH SF EL F+ F + IP+VN + M ++ N
Sbjct: 742 YSVPYSEHSSFRELAYFIIFFQIKQTIPTVNYENEFQLIKMNRIIQN 788
Score = 74 (31.1 bits), Expect = 6.7e-18, Sum P(6) = 6.7e-18
Identities = 28/85 (32%), Positives = 44/85 (51%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRK-KIYVNAA-----KFRVLKCL--DF-------SK 606
K L +IG+Y IGKE+L + +++ L IY+++ KF + K D+ K
Sbjct: 530 KFLIVIGTYIIGKEKLAISISKRLNNCLIYLSSIGSRKDKFEIFKTYKNDYLNSVMTIEK 589
Query: 607 EDIQWFTTNEHESHIHVMPMWTLAS 631
E TN+ + IH++PM TL S
Sbjct: 590 EFGNINDTNDSDCMIHLVPM-TLVS 613
Score = 52 (23.4 bits), Expect = 5.8e-20, Sum P(6) = 5.8e-20
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 170 VRCPLCGIDISDLNEELRQAHTNNCL 195
V CP+C I+ L+ R H + CL
Sbjct: 62 VYCPICNEGITHLDLRERTDHVDTCL 87
Score = 43 (20.2 bits), Expect = 5.8e-20, Sum P(6) = 5.8e-20
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 440 IYCSLITARLVNMKIGI 456
IYC+ IT RL+ ++ I
Sbjct: 319 IYCTGITGRLLTLRYSI 335
Score = 40 (19.1 bits), Expect = 8.8e-19, Sum P(6) = 8.8e-19
Identities = 12/52 (23%), Positives = 18/52 (34%)
Query: 25 SQTPKFTTTISKKQKIXXXXXXXXXXXXXXXXXVTNLGKENNIEGFYLNSDE 76
S T K + I KK+KI TN NI +++ +
Sbjct: 163 SSTEKTNSLIKKKRKIDPENKSKYINREFKNSSKTNTNTNTNINTTFIDQSK 214
>UNIPROTKB|F1NW11 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9031 "Gallus
gallus" [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0010212
"response to ionizing radiation" evidence=IEA] [GO:0030183 "B cell
differentiation" evidence=IEA] InterPro:IPR001279 SMART:SM00849
GO:GO:0010212 GO:GO:0006310 GO:GO:0006302 GO:GO:0000723
GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 IPI:IPI00602543 OMA:MFRNMPD
EMBL:AADN02060984 Ensembl:ENSGALT00000022573 Uniprot:F1NW11
Length = 714
Score = 240 (89.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 83/295 (28%), Positives = 143/295 (48%)
Query: 439 KIYCSLITARLV--NMKIGIPWDR-LQVLPLNQKTTIAGID----------VTCLEANHC 485
K+YCS +T L+ N K W+ + L + T I+ +D VT L A HC
Sbjct: 58 KLYCSPVTKELLLTNSKYAF-WENHIAALEVETPTQISLVDETTGEKEDIEVTLLPAGHC 116
Query: 486 PGSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYD 539
PGS++ LF+ +NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y
Sbjct: 117 PGSVMFLFQGENG-TVLYTGDFRLAKGEAARMELLHSGTSVKDIQSVYLDTTFCDPRFYH 175
Query: 540 FPKQEAVIQFVIEAIQAESFNPK--TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR 597
P +E + ++E +++ + + ++L G E LF+ ++ L K++VN K
Sbjct: 176 IPSREECLSGILELVRSWTTLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVN--KLD 233
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVM--PMWT-LASFKRLKHMSNQYAGRFSLIVAFSP 654
+ K + +I + T + + IH P RL G +++ P
Sbjct: 234 MFK----NMPEILYHITTDRYTQIHACRHPKDDDYVRGNRLPCGITCQNGTPLHVISIKP 289
Query: 655 -TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + KK + R + T Y +S H S++E+ +F+ ++ P ++ P+V
Sbjct: 290 STMWFGERIKKTNVIVRTGEST---YRACFSFHSSYSEIMDFLSYIRPVNVYPNV 341
>UNIPROTKB|Q5QJC2 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9031 "Gallus
gallus" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0006281 GO:GO:0006310
GO:GO:0004527 GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236
InterPro:IPR011084 Pfam:PF07522 EMBL:AY376898 IPI:IPI00602543
RefSeq:NP_001026765.1 UniGene:Gga.22874 ProteinModelPortal:Q5QJC2
STRING:Q5QJC2 GeneID:430764 KEGG:gga:430764 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 InParanoid:Q5QJC2 KO:K10887
OrthoDB:EOG4894M0 NextBio:20830567 Uniprot:Q5QJC2
Length = 714
Score = 240 (89.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 85/295 (28%), Positives = 145/295 (49%)
Query: 439 KIYCSLITARLV--NMKIGIPWDR----LQV-----LPLNQKTT--IAGIDVTCLEANHC 485
K+YCS +T L+ N K W+ L+V + L +TT I+VT L A HC
Sbjct: 58 KLYCSPVTKELLLTNSKYAF-WENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGHC 116
Query: 486 PGSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYD 539
PGS++ LF+ +NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y
Sbjct: 117 PGSVMFLFQGENG-TVLYTGDFRLAKGEAARMELLHSGTSVKDIQSVYLDTTFCDPRFYH 175
Query: 540 FPKQEAVIQFVIEAIQAESFNPK--TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR 597
P +E + ++E +++ + + ++L G E LF+ ++ L K++VN K
Sbjct: 176 IPSREECLSGILELVRSWTTLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVN--KLD 233
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVM--PMWT-LASFKRLKHMSNQYAGRFSLIVAFSP 654
+ K + +I + T + + IH P RL G +++ P
Sbjct: 234 MFK----NMPEILYHITTDRYTQIHACRHPKDDDYVRGNRLPCGITCQNGTPLHVISIKP 289
Query: 655 -TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + KK + R + T Y +S H S++E+ +F+ ++ P ++ P+V
Sbjct: 290 STMWFGERIKKTNVIVRTGEST---YRACFSFHSSYSEIMDFLSYIRPVNVYPNV 341
>RGD|708574 [details] [associations]
symbol:Dclre1c "DNA cross-link repair 1C" species:10116 "Rattus
norvegicus" [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA;ISO] [GO:0000723
"telomere maintenance" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA;ISO] [GO:0006310 "DNA
recombination" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA;ISO] [GO:0010212 "response to ionizing radiation"
evidence=IEA;ISO] [GO:0030183 "B cell differentiation"
evidence=IEA;ISO] [GO:0051276 "chromosome organization"
evidence=ISO] RGD:708574 GO:GO:0005634 GO:GO:0010212 GO:GO:0006310
GO:GO:0030183 GO:GO:0006302 GO:GO:0090305 GO:GO:0000723
eggNOG:COG1236 GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0
OMA:MFRNMPD EMBL:AF395746 EMBL:BC083546 IPI:IPI00209347
RefSeq:NP_671486.2 UniGene:Rn.204346 ProteinModelPortal:Q5XIX3
STRING:Q5XIX3 PhosphoSite:Q5XIX3 PRIDE:Q5XIX3
Ensembl:ENSRNOT00000021506 GeneID:259171 KEGG:rno:259171
UCSC:RGD:708574 InParanoid:Q5XIX3 NextBio:624222
ArrayExpress:Q5XIX3 Genevestigator:Q5XIX3
GermOnline:ENSRNOG00000015980 Uniprot:Q5XIX3
Length = 698
Score = 229 (85.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 77/294 (26%), Positives = 145/294 (49%)
Query: 440 IYCSLITARLV--NMKIGIPWD-RLQVLPLNQKTTIAGID----------VTCLEANHCP 486
+YCS +T L+ + K W+ R+ + + T ++ +D VT L A HCP
Sbjct: 59 LYCSPVTKELLLTSPKYKF-WENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCP 117
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDF 540
GS++ LF+ NG VL+TGDFR ++ E++ M +L + I ++ LDTT+C+P Y
Sbjct: 118 GSVMFLFQGSNG-TVLYTGDFRLAKGEVSRMELLHSGGRVKDIQSVYLDTTFCDPRFYQI 176
Query: 541 PKQEAVIQFVIEAIQAE-SFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +E ++ V+E +++ + +PK ++L G E LF ++ L +++V+ K +
Sbjct: 177 PSREECLRGVLELVRSWITRSPKHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDM 234
Query: 599 LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLI---VAFSP- 654
K + DI T + + IH + + + A + + ++ P
Sbjct: 235 FK----NMPDILHHLTTDRNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPS 290
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + +K + R + + Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 291 TMWFGERTRKTNVIVRTGESS---YRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
Score = 59 (25.8 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSL 444
+FL+H H DH +GL ++ CSL
Sbjct: 29 YFLSHCHKDHMKGLRAPSMKRRLECSL 55
>WB|WBGene00045237 [details] [associations]
symbol:mrt-1 species:6239 "Caenorhabditis elegans"
[GO:0008408 "3'-5' exonuclease activity" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0000003
"reproduction" evidence=IMP] [GO:0007004 "telomere maintenance via
telomerase" evidence=IGI] [GO:0006289 "nucleotide-excision repair"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001279
SMART:SM00849 GO:GO:0005634 GO:GO:0000003 GO:GO:0003697
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0008408 GO:GO:0007004
GO:GO:0006289 eggNOG:COG1236 InterPro:IPR011084 Pfam:PF07522
EMBL:Z81080 RefSeq:NP_740895.1 ProteinModelPortal:Q8T3E0 SMR:Q8T3E0
PaxDb:Q8T3E0 EnsemblMetazoa:F39H2.5.1 EnsemblMetazoa:F39H2.5.2
GeneID:172666 KEGG:cel:CELE_F39H2.5 UCSC:F39H2.5.1 CTD:172666
WormBase:F39H2.5 GeneTree:ENSGT00390000008639 HOGENOM:HOG000018686
InParanoid:Q8T3E0 OMA:HENIVIP NextBio:876487 Uniprot:Q8T3E0
Length = 608
Score = 232 (86.7 bits), Expect = 6.5e-16, P = 6.5e-16
Identities = 93/326 (28%), Positives = 148/326 (45%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G VD F G + FLTH H DHY+GL + + +YCS TA+L+ +G D
Sbjct: 220 GEDISVDYFLKKSGS-RYNFLTHAHSDHYRGLDKKWTRS-VYCSPETAKLLPHIMGYTAD 277
Query: 460 RLQ----VLPLNQKTT--IAGIDVTCLEANHCPGSIIILFEPQN-----GKAVLHTGDFR 508
+ PL + VT + ANHCPG+++ +FE G AVL TGDFR
Sbjct: 278 SPPPAGLINPLEENVPHKFDSFQVTLVNANHCPGAVMFVFEGSKIEEIAGGAVLCTGDFR 337
Query: 509 FSEEMASMSVLQTCPIH--------TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
+++M S+ +H + LD TY + FP++ + +++AI+A +
Sbjct: 338 -ADKMFLESLKPGNQLHWMTEIKFGIIYLDNTYFSLDMPFPERCEAEKILLKAIEA---H 393
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
P +I + +G+E L ++R+L + I V + + LDFS S+
Sbjct: 394 PHENIVIPLHRLGREELIQAISRILNEPIMVYDERKVISDLLDFS-------------SN 440
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE 680
V+ + K +K S + S+I+ S +TF G G IIR
Sbjct: 441 CGVLKQYR--DIKVIKKGSYCEISQNSVIIDISMLYYTFGNGVNDDEG-------IIR-- 489
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIP 706
+PYS+H S +E+ +F+ + I P
Sbjct: 490 IPYSDHSSRSEILKFLSHFHFKTITP 515
>UNIPROTKB|A6QLL4 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] InterPro:IPR001279
SMART:SM00849 GO:GO:0010212 GO:GO:0006310 GO:GO:0030183
GO:GO:0006302 GO:GO:0000723 eggNOG:COG1236 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 CTD:64421 HOGENOM:HOG000231568
HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0 OMA:MFRNMPD
EMBL:DAAA02035537 EMBL:DAAA02035538 EMBL:BC148006 IPI:IPI00701939
RefSeq:NP_001093847.1 UniGene:Bt.59419 STRING:A6QLL4
Ensembl:ENSBTAT00000013484 GeneID:517886 KEGG:bta:517886
InParanoid:A6QLL4 NextBio:20872534 Uniprot:A6QLL4
Length = 710
Score = 223 (83.6 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 78/294 (26%), Positives = 143/294 (48%)
Query: 440 IYCSLITARLV--NMKIGIPWD-RLQVLPLNQKTTIAGID----------VTCLEANHCP 486
+YCS +T L+ + K W+ R+ + + T I+ +D VT L A HCP
Sbjct: 59 LYCSPVTKELLLTSPKYRF-WEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCP 117
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDF 540
GS++ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+CNP Y
Sbjct: 118 GSVMFLFQGNNG-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCNPKYYQI 176
Query: 541 PKQEAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +E ++ ++E +++ S +P ++L G E LF ++ +++V+ K +
Sbjct: 177 PSREECLRGIMELVRSWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVD--KLDM 234
Query: 599 LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG--RFSL-IVAFSP- 654
+ + DI T + ++ IH + + + R L ++ P
Sbjct: 235 FR----NMPDILHHLTTDRDTQIHACRHPKAEEYFQWSKLPCGITSKNRIPLHTISIKPS 290
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + +K + R + + Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 291 TMWFGERTRKTNIIMRTGESS---YRACFSFHSSYSEIKDFLSYICPVNVYPNV 341
Score = 58 (25.5 bits), Expect = 7.5e-16, Sum P(2) = 7.5e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSL 444
+FL+H H DH +GL ++ CSL
Sbjct: 29 YFLSHCHKDHMKGLRAPSLKRRLECSL 55
>MGI|MGI:2441769 [details] [associations]
symbol:Dclre1c "DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=ISO] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030183 "B cell differentiation" evidence=IMP] [GO:0051276
"chromosome organization" evidence=IMP] InterPro:IPR001279
SMART:SM00849 MGI:MGI:2441769 GO:GO:0005634 GO:GO:0010212
GO:GO:0006310 GO:GO:0030183 GO:GO:0006302 GO:GO:0000723
EMBL:AL732620 eggNOG:COG1236 GO:GO:0000014 GO:GO:0008409
InterPro:IPR011084 Pfam:PF07522 GeneTree:ENSGT00530000063183
CTD:64421 HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887
OrthoDB:EOG4894M0 OMA:MFRNMPD EMBL:AF387731 EMBL:AK037126
EMBL:AK052369 EMBL:AK088810 IPI:IPI00170222 IPI:IPI00221500
IPI:IPI00607937 RefSeq:NP_001103684.1 RefSeq:NP_666226.2
RefSeq:NP_783614.1 UniGene:Mm.23483 UniGene:Mm.442710
ProteinModelPortal:Q8K4J0 SMR:Q8K4J0 STRING:Q8K4J0
PhosphoSite:Q8K4J0 PRIDE:Q8K4J0 Ensembl:ENSMUST00000061852
Ensembl:ENSMUST00000102988 Ensembl:ENSMUST00000115066 GeneID:227525
KEGG:mmu:227525 UCSC:uc008idz.2 UCSC:uc008iea.2 UCSC:uc008ieb.2
InParanoid:A2AJG6 NextBio:378619 Bgee:Q8K4J0 Genevestigator:Q8K4J0
Uniprot:Q8K4J0
Length = 705
Score = 222 (83.2 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 80/294 (27%), Positives = 144/294 (48%)
Query: 440 IYCSLITARLV--NMKIGIPWD-RLQVLPLNQKTTIAGID----------VTCLEANHCP 486
+YCS +T L+ + K W+ R+ + + T I+ +D VT L A HCP
Sbjct: 59 LYCSPVTKELLLTSPKYRF-WENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCP 117
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSEEMAS-MSVLQTC----PIHTLILDTTYCNP-LYDF 540
GS++ LF+ NG VL+TGDFR ++ AS M +L + I ++ LDTT+C+P Y
Sbjct: 118 GSVMFLFQGSNG-TVLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQI 176
Query: 541 PKQEAVIQFVIEAIQA-ESFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +E ++ ++E +++ + +P ++L G E LF ++ L +++V+ K +
Sbjct: 177 PSREQCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDM 234
Query: 599 LKCLDFSKEDIQWFTTNEHESHIHVM--PMWTLA-SFKRLK-HMSNQYAGRFSLIVAFSP 654
K + DI T + + IH P + +L +++Q I
Sbjct: 235 FK----NMPDILHHLTTDRNTQIHACRHPKAEECFQWNKLPCGITSQNKTALHTISIKPS 290
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + +K + R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 291 TMWFGERTRKTNVIVRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 341
Score = 58 (25.5 bits), Expect = 9.5e-16, Sum P(2) = 9.5e-16
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSL 444
+FL+H H DH +GL ++ CSL
Sbjct: 29 YFLSHCHKDHMKGLRAPSLKRRLECSL 55
>UNIPROTKB|Q96SD1 [details] [associations]
symbol:DCLRE1C "Protein artemis" species:9606 "Homo
sapiens" [GO:0000723 "telomere maintenance" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0010212 "response to ionizing
radiation" evidence=IEA] [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000014
"single-stranded DNA specific endodeoxyribonuclease activity"
evidence=IDA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IDA] InterPro:IPR001279 SMART:SM00849 GO:GO:0005634
GO:GO:0010212 EMBL:CH471072 GO:GO:0006310 GO:GO:0030183
GO:GO:0006302 GO:GO:0000723 eggNOG:COG1236 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522 CTD:64421
HOVERGEN:HBG081421 KO:K10887 EMBL:AJ296101 EMBL:AF395747
EMBL:AF395748 EMBL:AF395749 EMBL:AF395750 EMBL:AF395751
EMBL:AF395752 EMBL:AK021422 EMBL:DQ504427 EMBL:AL360083
EMBL:AC069544 EMBL:BC000863 EMBL:BC009185 EMBL:BC022254
IPI:IPI00290459 IPI:IPI00290918 IPI:IPI00396624 IPI:IPI00607742
RefSeq:NP_001029027.1 RefSeq:NP_001029029.1 RefSeq:NP_001029030.1
RefSeq:NP_071932.2 UniGene:Hs.656065 PDB:4HTP PDBsum:4HTP
ProteinModelPortal:Q96SD1 SMR:Q96SD1 STRING:Q96SD1
PhosphoSite:Q96SD1 DMDM:71153325 PaxDb:Q96SD1 PRIDE:Q96SD1
Ensembl:ENST00000357717 Ensembl:ENST00000378241
Ensembl:ENST00000378246 Ensembl:ENST00000378249
Ensembl:ENST00000378254 Ensembl:ENST00000378255
Ensembl:ENST00000378258 Ensembl:ENST00000378278
Ensembl:ENST00000378289 Ensembl:ENST00000396817
Ensembl:ENST00000418843 Ensembl:ENST00000453695
Ensembl:ENST00000456122 GeneID:64421 KEGG:hsa:64421 UCSC:uc001inl.3
UCSC:uc001ino.3 UCSC:uc010qbx.2 GeneCards:GC10M014939
HGNC:HGNC:17642 MIM:602450 MIM:603554 MIM:605988 neXtProt:NX_Q96SD1
Orphanet:39041 Orphanet:275 PharmGKB:PA27176 InParanoid:Q96SD1
OMA:RTRTIHR PhylomeDB:Q96SD1 GenomeRNAi:64421 NextBio:66403
ArrayExpress:Q96SD1 Bgee:Q96SD1 Genevestigator:Q96SD1
GermOnline:ENSG00000152457 Uniprot:Q96SD1
Length = 692
Score = 219 (82.2 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 77/293 (26%), Positives = 140/293 (47%)
Query: 440 IYCSLITARLV--NMKIGIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPG 487
+YCS +T L+ + K R+ + + T I+ +D VT L A HCPG
Sbjct: 59 LYCSPVTKELLLTSPKYRFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPG 118
Query: 488 SIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFP 541
S++ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P
Sbjct: 119 SVMFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIP 177
Query: 542 KQEAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
+E + V+E +++ + +P ++L G E LF ++ L +++VN K +
Sbjct: 178 SREECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVN--KLDMF 235
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSP-T 655
+ + +I T + + IH + + + R + I++ P T
Sbjct: 236 R----NMPEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPST 291
Query: 656 GWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
W + +K + R + + Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 292 MWFGERSRKTNVIVRTGESS---YRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
Score = 58 (25.5 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSL 444
+FL+H H DH +GL ++ CSL
Sbjct: 29 YFLSHCHKDHMKGLRAPTLKRRLECSL 55
>UNIPROTKB|E2RBE9 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0030183 "B cell differentiation"
evidence=IEA] [GO:0010212 "response to ionizing radiation"
evidence=IEA] [GO:0008409 "5'-3' exonuclease activity"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0000014 "single-stranded
DNA specific endodeoxyribonuclease activity" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 GO:GO:0010212 GO:GO:0006310
GO:GO:0030183 GO:GO:0006302 GO:GO:0000723 GO:GO:0000014
GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 CTD:64421 KO:K10887 OMA:MFRNMPD
EMBL:AAEX03001258 RefSeq:XP_544251.2 ProteinModelPortal:E2RBE9
Ensembl:ENSCAFT00000007553 GeneID:487123 KEGG:cfa:487123
NextBio:20860765 Uniprot:E2RBE9
Length = 693
Score = 206 (77.6 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 76/294 (25%), Positives = 138/294 (46%)
Query: 439 KIYCSLITARLVNMKIGIP-WD-RLQVLPLNQKTTIAGID----------VTCLEANHCP 486
++YCS +T L+ W+ R+ + + T I +D VT L A HCP
Sbjct: 58 RLYCSPVTKELLLTSPRYRFWEKRIISIEIETPTQIPLVDEASGEKEDIVVTLLPAGHCP 117
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDF 540
GS++ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y
Sbjct: 118 GSVMFLFQGNNG-TVLYTGDFRMAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQI 176
Query: 541 PKQEAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +E ++ + E +++ + +P ++L G E LF ++ +I+V+ K +
Sbjct: 177 PSREECLRGISELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVD--KLDM 234
Query: 599 LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM--SNQYAGRFSL-IVAFSP- 654
+ + DI T + + IH + + R L ++ P
Sbjct: 235 FR----NMPDILHHLTTDRNTQIHACRHPKAEEYFHWNKLPCGAISKNRIPLHTISIKPS 290
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + +K + R + + Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 291 TMWFGERTRKTNVIVRTGESS---YRACFSFHSSYSEIKDFLNYICPVNVYPNV 341
Score = 58 (25.5 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSL 444
+FL+H H DH +GL ++ CSL
Sbjct: 29 YFLSHCHKDHMKGLRAPALKRRLECSL 55
>ZFIN|ZDB-GENE-041210-72 [details] [associations]
symbol:dclre1c "DNA cross-link repair 1C, PSO2
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR001279 SMART:SM00849 ZFIN:ZDB-GENE-041210-72
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 GO:GO:0004527
GO:GO:0090305 GO:GO:0004519 eggNOG:COG1236 InterPro:IPR011084
Pfam:PF07522 GeneTree:ENSGT00530000063183 CTD:64421
HOGENOM:HOG000231568 HOVERGEN:HBG081421 KO:K10887 OrthoDB:EOG4894M0
EMBL:BX901962 EMBL:BC115304 IPI:IPI00507176 RefSeq:NP_001038566.1
UniGene:Dr.133955 ProteinModelPortal:Q5RGE5 STRING:Q5RGE5
Ensembl:ENSDART00000067188 GeneID:566285 KEGG:dre:566285
InParanoid:Q5RGE5 OMA:MFRNMPD NextBio:20888116 Bgee:Q5RGE5
Uniprot:Q5RGE5
Length = 639
Score = 214 (80.4 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 84/296 (28%), Positives = 135/296 (45%)
Query: 439 KIYCSLITARLV--NMKIGIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCP 486
K+YCS +T L+ N + D + L L+ T+I+ ID VT L A HCP
Sbjct: 58 KLYCSYVTKELLLSNPRYAFWEDHIVPLELDSPTSISLIDESTGETEDVVVTLLSAGHCP 117
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDF 540
GS++ LFE G VL+TGDFR + + A M L + I ++ +DTT+ +P Y
Sbjct: 118 GSVMFLFEGAKG-TVLYTGDFRLAVGDAARMEYLHSGDRVKDIQSVYIDTTFFDPKYYQI 176
Query: 541 PKQEAVIQFVIEAIQAESF-NP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +EA + + + +Q +P ++L G E LF + + +I+VN+
Sbjct: 177 PSREACLAGIQQLVQDWICQSPYHVVWLNCKAAYGYEYLFTNLGQEFNSQIHVNS----- 231
Query: 599 LKCLDFSKE--DIQWFTTNEHESHIHVMPMWTLASFKRLKHM---SNQYAGRFSLIVAFS 653
LD K+ +I T + IH F R + S G I++
Sbjct: 232 ---LDMFKKMPEILCHVTTNRATQIHACRHPKDEEFFRANRLPCGSTAPDGIPLNIISIK 288
Query: 654 P-TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
P T W + +K S + + Y +S H S+ E+K+F+ ++ P +I P+V
Sbjct: 289 PSTIWFGERTRKTSVVVKMGSSS---YRACFSFHSSYLEVKDFLSYICPVNIYPNV 341
>UNIPROTKB|F1RW83 [details] [associations]
symbol:DCLRE1C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030183 "B cell differentiation" evidence=IEA]
[GO:0010212 "response to ionizing radiation" evidence=IEA]
[GO:0008409 "5'-3' exonuclease activity" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0000014 "single-stranded DNA specific
endodeoxyribonuclease activity" evidence=IEA] GO:GO:0010212
GO:GO:0006310 GO:GO:0030183 GO:GO:0006302 GO:GO:0000723
GO:GO:0000014 GO:GO:0008409 InterPro:IPR011084 Pfam:PF07522
GeneTree:ENSGT00530000063183 OMA:MFRNMPD EMBL:CU929591
EMBL:FP312867 Ensembl:ENSSSCT00000012093 Uniprot:F1RW83
Length = 695
Score = 206 (77.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 77/293 (26%), Positives = 138/293 (47%)
Query: 440 IYCSLITARLV--NMKIGIPWD-RLQVLPLNQKTTIAGID----------VTCLEANHCP 486
+YCS +T L+ N + W+ R+ + + T I+ ID VT L A HCP
Sbjct: 60 LYCSPVTRELLLTNPRYRF-WEKRIVSIEVETPTQISLIDEASGEKEEIVVTLLPAGHCP 118
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC----PIHTLILDTTYCNP-LYDFP 541
GS++ F +G VL+TGDF E A M +L + I ++ LDTT+C+P Y P
Sbjct: 119 GSVMSYFRXTHG-TVLYTGDFWQKGEAARMELLHSGGSVKDIQSVYLDTTFCHPKYYQIP 177
Query: 542 KQEAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
+E ++ ++E +++ + +P ++L G E LF ++ +++VN K +
Sbjct: 178 SREECLRGILELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVN--KLDMF 235
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG--RFSL-IVAFSP-T 655
+ + DI T + + IH + + R L I++ P T
Sbjct: 236 R----NMPDILHHLTTDRGTQIHACRHPKAEEYFHWNKLPCGITSKNRIPLHIISIKPST 291
Query: 656 GWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
W + +K + R + + Y +S H S++E+K+F+ ++SP ++ P+V
Sbjct: 292 MWFGERTRKTNVIVRTGESS---YRACFSFHSSYSEIKDFLSYISPVNVYPNV 341
Score = 54 (24.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 418 WFLTHFHM-DHYQGLTRSFHHGKIYCSL 444
+FL+H H DH +GL S ++ CSL
Sbjct: 29 YFLSHCHKADHMKGLRASTLKRRLECSL 56
>TAIR|locus:505006131 [details] [associations]
symbol:AT1G19025 "AT1G19025" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 KO:K15340 InterPro:IPR011084
Pfam:PF07522 IPI:IPI00546684 RefSeq:NP_564070.1 UniGene:At.41767
UniGene:At.74256 ProteinModelPortal:F4IDZ7 SMR:F4IDZ7
EnsemblPlants:AT1G19025.1 GeneID:838484 KEGG:ath:AT1G19025
OMA:IRPSAQW Uniprot:F4IDZ7
Length = 549
Score = 184 (69.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 69/245 (28%), Positives = 108/245 (44%)
Query: 400 GTPFRVDAF-KYL--RGDCSHWFLTHFHMDHYQGLTRS-FHHGKIYCSLITARLVNMKIG 455
G PF VD F Y + H FLTH H DH G++ S IY + +T L+ +
Sbjct: 8 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 67
Query: 456 IPWDRLQV-LPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ V + + Q + D VT +ANHCPG+++ LFE G +LHTGD R +
Sbjct: 68 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 126
Query: 511 --------EEMASMS--VLQTCPIHTLILDTTYCNPLYD--FPKQEAVIQFVIEAIQAES 558
E+ S + C + + LD T+ + FP + + I+ +I I
Sbjct: 127 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHP 186
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
P + + +G+E + LEV+R KIYV+ A L+C + + +
Sbjct: 187 DAP--VVYLACDMLGQEDVLLEVSRTFGSKIYVDKATN--LECFRSLMVIVPEIVSEDPS 242
Query: 619 SHIHV 623
S H+
Sbjct: 243 SRFHI 247
Score = 51 (23.0 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 10/30 (33%), Positives = 19/30 (63%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ V YS H S EL+ ++ +SP+ ++ +V
Sbjct: 315 WHVCYSMHSSRAELESAMQLLSPKWVVSTV 344
Score = 43 (20.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 616 EHESHIHVM-PMWTLASFKRLKHMSNQYAGRFSLIVAFSP 654
E ES + ++ P W +++ + M Y + I FSP
Sbjct: 327 ELESAMQLLSPKWVVSTVPSCRAMELNYVKKNCFISRFSP 366
>CGD|CAL0004348 [details] [associations]
symbol:PSO2 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 CGD:CAL0004348
GO:GO:0016787 EMBL:AACQ01000059 EMBL:AACQ01000058 eggNOG:COG1236
RefSeq:XP_717085.1 RefSeq:XP_717164.1 ProteinModelPortal:Q5A5N8
GeneID:3641241 GeneID:3641328 KEGG:cal:CaO19.12822
KEGG:cal:CaO19.5362 Uniprot:Q5A5N8
Length = 537
Score = 135 (52.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL--- 461
VD F G + LTH H DH QGL S G++YCS +T +++ + R+
Sbjct: 19 VDKFS---GTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKS--TLELDTRYTRVSRF 73
Query: 462 -QVLPLNQKTTI---AG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
+ N+ T+ G + +T + + HCPGS + L E K VL TGD R +E ++
Sbjct: 74 FKAKEYNETFTVDILLGKVSITMIPSYHCPGSAMFLLE-SFCKNVLITGDVR-AESWWTL 131
Query: 517 SVLQ 520
S+++
Sbjct: 132 SLIK 135
Score = 61 (26.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 46/200 (23%), Positives = 83/200 (41%)
Query: 527 LILDTTYC---NP-LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVA 582
+ LDTT+ P +Y P E + IE ++ F+ F G E + ++
Sbjct: 152 IYLDTTFSYRGEPYIYIMPNSEGIFA-AIELLKLYPFDSDLSFSFVDTVSGSEEAWFQIV 210
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKED-IQWFTTNEHESHIHVMPMWTLASFKRLKHMSN- 640
R + + + K LD D + T ++ T+A K++ +++
Sbjct: 211 RHFNGTLVSHGI---LQKRLDLCGMDLVDGKTPTFKVGNVPDTTPITIA-IKQIINLNAI 266
Query: 641 QYAGRF---SLI-VAFSP-TGW-TFSKGKK--KSPGRRW---QQGT-IIRYEVP--YSEH 686
+YA +F ++ V FS T T KG GR+W + G+ ++ +P +S H
Sbjct: 267 EYASQFLPRNICDVDFSSATSLVTTKKGHHIYSLDGRKWLLPKGGSELLPTCIPLMFSRH 326
Query: 687 CSFTELKEFVKFVSPEHIIP 706
S+ E + V SP+ + P
Sbjct: 327 SSYQESRNLVALFSPKSVYP 346
>UNIPROTKB|Q5A5N8 [details] [associations]
symbol:PSO2 "Putative uncharacterized protein PSO2"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001279 SMART:SM00849 CGD:CAL0004348
GO:GO:0016787 EMBL:AACQ01000059 EMBL:AACQ01000058 eggNOG:COG1236
RefSeq:XP_717085.1 RefSeq:XP_717164.1 ProteinModelPortal:Q5A5N8
GeneID:3641241 GeneID:3641328 KEGG:cal:CaO19.12822
KEGG:cal:CaO19.5362 Uniprot:Q5A5N8
Length = 537
Score = 135 (52.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 40/124 (32%), Positives = 63/124 (50%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL--- 461
VD F G + LTH H DH QGL S G++YCS +T +++ + R+
Sbjct: 19 VDKFS---GTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKS--TLELDTRYTRVSRF 73
Query: 462 -QVLPLNQKTTI---AG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
+ N+ T+ G + +T + + HCPGS + L E K VL TGD R +E ++
Sbjct: 74 FKAKEYNETFTVDILLGKVSITMIPSYHCPGSAMFLLE-SFCKNVLITGDVR-AESWWTL 131
Query: 517 SVLQ 520
S+++
Sbjct: 132 SLIK 135
Score = 61 (26.5 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 46/200 (23%), Positives = 83/200 (41%)
Query: 527 LILDTTYC---NP-LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVA 582
+ LDTT+ P +Y P E + IE ++ F+ F G E + ++
Sbjct: 152 IYLDTTFSYRGEPYIYIMPNSEGIFA-AIELLKLYPFDSDLSFSFVDTVSGSEEAWFQIV 210
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKED-IQWFTTNEHESHIHVMPMWTLASFKRLKHMSN- 640
R + + + K LD D + T ++ T+A K++ +++
Sbjct: 211 RHFNGTLVSHGI---LQKRLDLCGMDLVDGKTPTFKVGNVPDTTPITIA-IKQIINLNAI 266
Query: 641 QYAGRF---SLI-VAFSP-TGW-TFSKGKK--KSPGRRW---QQGT-IIRYEVP--YSEH 686
+YA +F ++ V FS T T KG GR+W + G+ ++ +P +S H
Sbjct: 267 EYASQFLPRNICDVDFSSATSLVTTKKGHHIYSLDGRKWLLPKGGSELLPTCIPLMFSRH 326
Query: 687 CSFTELKEFVKFVSPEHIIP 706
S+ E + V SP+ + P
Sbjct: 327 SSYQESRNLVALFSPKSVYP 346
>TAIR|locus:2152521 [details] [associations]
symbol:AT5G48680 "AT5G48680" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
EMBL:BT021983 EMBL:BT025265 EMBL:AK228939 IPI:IPI00540454
RefSeq:NP_199679.2 UniGene:At.29833 ProteinModelPortal:Q52K85
SMR:Q52K85 PRIDE:Q52K85 EnsemblPlants:AT5G48680.1 GeneID:834926
KEGG:ath:AT5G48680 TAIR:At5g48680 eggNOG:NOG308815
HOGENOM:HOG000240855 InParanoid:Q52K85 OMA:KALLIPM PhylomeDB:Q52K85
ProtClustDB:CLSN2917125 Genevestigator:Q52K85 Uniprot:Q52K85
Length = 206
Score = 130 (50.8 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 40/117 (34%), Positives = 64/117 (54%)
Query: 177 IDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHER-GPRLEPEIDLGLGRSPQKAV--- 232
+ ++DL ++L + T N + +N ++ V P ++ +PE R+ +K
Sbjct: 91 VSVADLRDKL--SRTVN--PQTKNSKREAVRPAIKKVSVGTKPETRAAPNRATKKDPQQN 146
Query: 233 DVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTL 289
D S V FL SLGL +Y AF EE+D D L+ +T++DL + + +GPRKKIL L
Sbjct: 147 DAS-VDSFLESLGLEKYSTAFQVEEVDMDALRHMTDDDLKAL-LIPMGPRKKILLAL 201
>ZFIN|ZDB-GENE-110110-3 [details] [associations]
symbol:bicc2 "bicaudal C homolog 2" species:7955
"Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001660 InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105 SMART:SM00322
SMART:SM00454 ZFIN:ZDB-GENE-110110-3 GO:GO:0003723
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GeneTree:ENSGT00690000102145
EMBL:CU468924 IPI:IPI00934064 Ensembl:ENSDART00000031211
OMA:EFFERVM Bgee:F1Q505 Uniprot:F1Q505
Length = 849
Score = 134 (52.2 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 27/72 (37%), Positives = 45/72 (62%)
Query: 224 LGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRK 283
+GRSP A ++E L LGL +Y + F ++EID+ T L++EDL +GV+ G R+
Sbjct: 742 IGRSPSPA-HADDLIELLAQLGLEKYIDIFQQQEIDYQTFLTLSDEDLKEVGVSTFGARR 800
Query: 284 KILHTLCEIKKE 295
K+L + ++ K+
Sbjct: 801 KMLLAIADLSKK 812
Score = 56 (24.8 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 66 NIEGFYLNSDETCSLEAIPS 85
++E YLN D CSL PS
Sbjct: 578 DVESVYLNRDRRCSLRIFPS 597
>UNIPROTKB|Q0C1L6 [details] [associations]
symbol:HNE_1669 "Putative uncharacterized protein"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001279 SMART:SM00849 GO:GO:0016787 EMBL:CP000158
GenomeReviews:CP000158_GR eggNOG:COG1236 RefSeq:YP_760377.1
ProteinModelPortal:Q0C1L6 STRING:Q0C1L6 GeneID:4288204
KEGG:hne:HNE_1669 PATRIC:32216161 HOGENOM:HOG000035995 OMA:STFGLPI
ProtClustDB:CLSK2517173 BioCyc:HNEP228405:GI69-1701-MONOMER
InterPro:IPR026360 TIGRFAMs:TIGR04122 Uniprot:Q0C1L6
Length = 333
Score = 138 (53.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 50/178 (28%), Positives = 84/178 (47%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
+TH H DH + HG++ + T ++ + G P + V + + + VT
Sbjct: 35 VTHGHADHARA-----GHGRVIATPETLAIMEARYG-PTEGWPVA-YGETVEVGDVRVTL 87
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDF-RFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H GS +L E + G+ V+ TGDF R ++ V C + LI + T+ P++
Sbjct: 88 YPAGHVLGSAQVLLE-RAGERVIVTGDFKRAADPTCPPFVPIACDV--LITEATFGLPVF 144
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARV-LRKKIYVNAA 594
P I V+E + AES P+ L+G+Y +GK +R+ + K IY++ A
Sbjct: 145 RHPPASDEIAKVMERL-AES--PERCVLVGAYALGKAQRVICHLREAGYDKPIYLHGA 199
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 684 SEHCSFTELKEFVKFVSPEHI 704
S+H + EL ++ V+P +
Sbjct: 278 SDHADWEELTRTIREVAPSEV 298
>TAIR|locus:2098550 [details] [associations]
symbol:AT3G07170 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016757 "transferase
activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001660 PROSITE:PS50105 SMART:SM00454 EMBL:CP002686
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 EMBL:AC012395 HOGENOM:HOG000240855
ProtClustDB:CLSN2917125 UniGene:At.27471 UniGene:At.48625
EMBL:AF410300 EMBL:AY142044 IPI:IPI00535904 RefSeq:NP_566300.1
ProteinModelPortal:Q9SFU7 SMR:Q9SFU7 IntAct:Q9SFU7 PRIDE:Q9SFU7
EnsemblPlants:AT3G07170.1 GeneID:819904 KEGG:ath:AT3G07170
TAIR:At3g07170 InParanoid:Q9SFU7 OMA:EPASKSI PhylomeDB:Q9SFU7
Genevestigator:Q9SFU7 Uniprot:Q9SFU7
Length = 203
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 29/64 (45%), Positives = 38/64 (59%)
Query: 226 RSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKI 285
R + D S V FL SLGL +Y AF EE+D D L +T++DL + + +GPRKKI
Sbjct: 138 RKKSQQAD-SSVDSFLESLGLEKYSTAFQVEEVDMDALMHMTDDDLKAM-LIPMGPRKKI 195
Query: 286 LHTL 289
L L
Sbjct: 196 LLAL 199
>DICTYBASE|DDB_G0274799 [details] [associations]
symbol:cpsf3 "cleavage and polyadenylation
specificity factor 73 kDa subunit" species:44689 "Dictyostelium
discoideum" [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;IC] [GO:0006379 "mRNA
cleavage" evidence=ISS] [GO:0006378 "mRNA polyadenylation"
evidence=ISS] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=ISS] [GO:0003730 "mRNA 3'-UTR
binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004518 "nuclease activity"
evidence=IEA] InterPro:IPR001279 Pfam:PF00753 SMART:SM00849
dictyBase:DDB_G0274799 Pfam:PF07521 GO:GO:0046872 GO:GO:0006378
GenomeReviews:CM000151_GR EMBL:AAFI02000012 GO:GO:0003730
GO:GO:0004519 GO:GO:0005847 GO:GO:0006379 eggNOG:COG1236
InterPro:IPR022712 InterPro:IPR011108 Pfam:PF10996 SMART:SM01027
KO:K14403 OMA:YVSFSAH InterPro:IPR021718 Pfam:PF11718 SMART:SM01098
RefSeq:XP_643926.1 ProteinModelPortal:Q86A79 SMR:Q86A79
STRING:Q86A79 EnsemblProtists:DDB0233696 GeneID:8619353
KEGG:ddi:DDB_G0274799 ProtClustDB:CLSZ2431003 Uniprot:Q86A79
Length = 774
Score = 112 (44.5 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 34/123 (27%), Positives = 60/123 (48%)
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
++++ + QK GI VTC A H G+ + + E G +L+TGDF E+ M
Sbjct: 160 EKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIA-GVKILYTGDFSRQEDRHLMGA 218
Query: 519 LQTCPIHT--LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKER 576
+T P+ LI+++TY +++ P+ E +F Q N K L + + +G+ +
Sbjct: 219 -ETPPVKVDVLIIESTYGVQVHE-PRLEREKRFTSSVHQVVERNGKCLIPV--FALGRAQ 274
Query: 577 LFL 579
L
Sbjct: 275 ELL 277
Score = 64 (27.6 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
V +S H F + EF++ + P H++ V+ D + + SL+
Sbjct: 418 VSFSAHSDFLQTSEFIQEIQPPHVV-LVHGDANEMSRLRQSLV 459
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 17/61 (27%), Positives = 28/61 (45%)
Query: 371 SGSDRKKHAAKDQSKGRKHK-DI---PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMD 426
SGS+ + + KG+K D P + + PF D+ + D ++HFH+D
Sbjct: 43 SGSEVGRSCVLLKYKGKKVMFDCGVHPAYSGLVSLPF-FDSIESDIPDIDLLLVSHFHLD 101
Query: 427 H 427
H
Sbjct: 102 H 102
>UNIPROTKB|Q9H694 [details] [associations]
symbol:BICC1 "Protein bicaudal C homolog 1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=IDA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0007275 GO:GO:0003723
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0090090 EMBL:AY726586
EMBL:AK026129 IPI:IPI00017921 IPI:IPI00645643 RefSeq:NP_001073981.1
UniGene:Hs.158745 ProteinModelPortal:Q9H694 SMR:Q9H694
STRING:Q9H694 PhosphoSite:Q9H694 DMDM:119367815 PaxDb:Q9H694
PRIDE:Q9H694 DNASU:80114 Ensembl:ENST00000373886 GeneID:80114
KEGG:hsa:80114 UCSC:uc001jki.1 CTD:80114 GeneCards:GC10P060272
H-InvDB:HIX0008843 HGNC:HGNC:19351 HPA:HPA045212 MIM:601331
MIM:614295 neXtProt:NX_Q9H694 Orphanet:97364 Orphanet:97363
PharmGKB:PA134878124 eggNOG:NOG259272 HOGENOM:HOG000068054
HOVERGEN:HBG058964 InParanoid:Q9H694 OMA:EWSEERF OrthoDB:EOG40P466
GenomeRNAi:80114 NextBio:70334 ArrayExpress:Q9H694 Bgee:Q9H694
CleanEx:HS_BICC1 Genevestigator:Q9H694 GermOnline:ENSG00000122870
Uniprot:Q9H694
Length = 974
Score = 129 (50.5 bits), Expect = 0.00020, P = 0.00020
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K
Sbjct: 876 SDLPELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 935
Query: 295 EYSRAVES-NKDAHVSNDGSSSYHGSERHKEASKV 328
+ ES N G+S + H + + V
Sbjct: 936 NRRKLFESPNARTSFLEGGASGRLPRQYHSDIASV 970
>UNIPROTKB|F1RG08 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0090090 GeneTree:ENSGT00690000102145 CTD:80114 OMA:EWSEERF
EMBL:CU407317 EMBL:CU468371 RefSeq:XP_001929158.2
Ensembl:ENSSSCT00000011170 GeneID:100154253 KEGG:ssc:100154253
Uniprot:F1RG08
Length = 894
Score = 124 (48.7 bits), Expect = 0.00062, P = 0.00062
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K
Sbjct: 796 SDLPELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 855
Query: 295 EYSRAVES-NKDAHVSNDGSSSYHGSERHKEASKV 328
+ E N G+S + H + + V
Sbjct: 856 NRRKLFEPPNARTSFLEGGASGRLPRQYHSDIASV 890
>UNIPROTKB|F1MDL5 [details] [associations]
symbol:BICC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001660 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50105
SMART:SM00322 SMART:SM00454 GO:GO:0003723 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0090090 GeneTree:ENSGT00690000102145 OMA:EWSEERF
EMBL:DAAA02061579 IPI:IPI00710869 Ensembl:ENSBTAT00000031361
Uniprot:F1MDL5
Length = 870
Score = 123 (48.4 bits), Expect = 0.00077, P = 0.00076
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K
Sbjct: 772 SDLPELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 831
Query: 295 EYSRAVES-NKDAHVSNDGSSSYHGSERHKEASKV 328
+ E N G+S + H + + V
Sbjct: 832 NRRKLFEPPNTRTSFLEGGASGRLPRQYHADIASV 866
>TAIR|locus:2020643 [details] [associations]
symbol:AT1G70180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] InterPro:IPR001660 SMART:SM00454
EMBL:CP002684 Gene3D:1.10.150.50 InterPro:IPR013761
InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
HOGENOM:HOG000240855 EMBL:AY065147 EMBL:BT009660 IPI:IPI00541687
RefSeq:NP_177175.2 UniGene:At.10299 ProteinModelPortal:Q8VZ94
SMR:Q8VZ94 PRIDE:Q8VZ94 EnsemblPlants:AT1G70180.2 GeneID:843354
KEGG:ath:AT1G70180 TAIR:At1g70180 InParanoid:Q8VZ94 OMA:RSPPRNA
PhylomeDB:Q8VZ94 ProtClustDB:CLSN2690487 Genevestigator:Q8VZ94
Uniprot:Q8VZ94
Length = 460
Score = 119 (46.9 bits), Expect = 0.00087, P = 0.00087
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 218 PEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVT 277
P + + SP + V FL+S+GL +Y AF REE+D T++ + E DL + +
Sbjct: 384 PPLGSIMQNSPFSVDEPLSVDGFLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDL-II 442
Query: 278 ALGPRKKILHTLCEI 292
+GPRKKIL + +
Sbjct: 443 PMGPRKKILQAIASL 457
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 725 699 0.00082 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 623 (66 KB)
Total size of DFA: 402 KB (2195 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 59.91u 0.10s 60.01t Elapsed: 00:00:02
Total cpu time: 59.92u 0.10s 60.02t Elapsed: 00:00:02
Start: Fri May 10 09:51:56 2013 End: Fri May 10 09:51:58 2013