BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004877
(725 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255550227|ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223544650|gb|EEF46166.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 737
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/740 (64%), Positives = 553/740 (74%), Gaps = 28/740 (3%)
Query: 2 PTKRTVSQPISTAYDDDDFQVPLSQTPKFTTTISKKQKIPLKPSNNPSRPSKKPKPVTNL 61
P ++S PIS DDDDFQ P+SQ T+ S K SNN +RP K+ K N
Sbjct: 10 PLSLSLSIPISDHDDDDDFQTPISQQRPSTSKKSLKS------SNNCNRPPKRSKQSANP 63
Query: 62 GKEN-------NIEGFYLNSDETCSLEAIPSSIDCTRPTACVDIDHSPEC--EEIKEILK 112
GKEN E SDE CSL+ I SSIDC+ + D D+ + EE E+ K
Sbjct: 64 GKENVEPTCSLQNEKTTSPSDEVCSLDLIESSIDCSYRSVHGDGDNDVDFVKEEGLEVKK 123
Query: 113 VNEGYLRNSVESRLLRPRAADCRLSEESEEEEEDAVLDVLLKLC--DKNDVNCNKIDES- 169
+GYL NS+ES+L+R +D + +E + EED+ LD+L+KLC + N V D
Sbjct: 124 --KGYLCNSIESKLIRSGVSD-SVGDEFGDFEEDSDLDLLIKLCTDEMNQVPSGVADGDC 180
Query: 170 -VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLGRSP 228
V+CPLCGIDIS+L+EE R HTN+CLDK +N Q+V ++ G P++ +G S
Sbjct: 181 LVQCPLCGIDISNLSEESRLVHTNDCLDKQDNHLQEVTCGSNDEGTHFAPQV---VGDSG 237
Query: 229 QKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHT 288
K VDVSPV+++L +LGL RY +AF+REEIDWD+L+WLTEEDL IGVTALGPRKKI+H
Sbjct: 238 HKVVDVSPVLQWLRNLGLERYGDAFIREEIDWDSLKWLTEEDLFSIGVTALGPRKKIVHA 297
Query: 289 LCEIKKEYSRAVESNKDAHVSND-GSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFL 347
L E++K + E+++D + S D GS S H +E EASKV D +SK ANKLITD+F
Sbjct: 298 LAELRKGCNLVDETHRDPNASADVGSLSTHAAEMQMEASKVSGDETSKQTANKLITDYFP 357
Query: 348 GSI--TNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRV 405
GS+ T +K + + G K+ S K+ A K K KDIP WC +PGTPFRV
Sbjct: 358 GSVSVTVREKGCSIAKEKRGPAKNRPDSVHKRMAKNHPVKNGKLKDIPLWCSIPGTPFRV 417
Query: 406 DAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLP 465
DAFKYLRGDCSHWFLTHFHMDHYQGLTRSF HGKIYCSLITARLVNMKIGIPWDRLQVLP
Sbjct: 418 DAFKYLRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITARLVNMKIGIPWDRLQVLP 477
Query: 466 LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIH 525
LN+K +IAG+DVTCL+ANHCPGSII+LFEP NGKAVLHTGDFRF E MASM+ LQ C IH
Sbjct: 478 LNKKISIAGVDVTCLDANHCPGSIIVLFEPPNGKAVLHTGDFRFCENMASMTALQMCRIH 537
Query: 526 TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 585
TLILDTTYCNP YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL
Sbjct: 538 TLILDTTYCNPQYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 597
Query: 586 RKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGR 645
R+K+YV AAKFR+L+ L FSKE +QWFT NEHES IHV+PMWTLASFKRLKH+SNQYA R
Sbjct: 598 RRKVYVTAAKFRLLESLGFSKEAMQWFTLNEHESQIHVVPMWTLASFKRLKHISNQYASR 657
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHII 705
FS IV+FSPTGWTF KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTEL+EFVKFVSPE II
Sbjct: 658 FSPIVSFSPTGWTFGKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELREFVKFVSPEKII 717
Query: 706 PSVNNDGRDSANAMVSLLLN 725
PSVNNDG +S + MVSLLL+
Sbjct: 718 PSVNNDGPESVDTMVSLLLS 737
>gi|224092047|ref|XP_002309453.1| predicted protein [Populus trichocarpa]
gi|222855429|gb|EEE92976.1| predicted protein [Populus trichocarpa]
Length = 740
Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/750 (65%), Positives = 558/750 (74%), Gaps = 35/750 (4%)
Query: 1 MPTKRTVSQPISTAYDDDDFQVPLSQTPKFTTTISKKQKIPLKPSNNPSRPSKKPKPVTN 60
M +K SQ S DDDDFQ+PLSQTPK T +I K P++NP RPSKKPK N
Sbjct: 1 MSSKFNSSQFSSLDDDDDDFQIPLSQTPKQTLSIRNK------PADNPRRPSKKPKKPPN 54
Query: 61 LGKEN---NIEGFY---------LNSDETCSLEAIPSSIDCTRPTACVDIDHSPECEEIK 108
GKEN N Y N DE CSL+ I SSIDCT + V + K
Sbjct: 55 PGKENIDPNSLLLYQKTESGANDFNLDENCSLDFIESSIDCTVSSK-VGNEKFDSGSGKK 113
Query: 109 EILKVNEGYLRNSVESRLLRPRAADCRLSEESEEE-EEDAVLDVLLKLCD---------K 158
E L+V+ GYL NS+E+RL++ R ++ +EE+ EE++ LD L+KLC K
Sbjct: 114 EKLEVSGGYLCNSIEARLMKSRVDYSGVNVGNEEDFEENSELDALIKLCTEEEESEAREK 173
Query: 159 NDVNCNKIDES--VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRL 216
VNCN DE V CPLCG DISDL+EE R HTN CLDK EN VV + P +
Sbjct: 174 IKVNCNG-DECCFVLCPLCGTDISDLSEEFRLVHTNECLDKEENSVTYVVLGGDDGRPEV 232
Query: 217 EPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGV 276
P G K V VSPVV++L +LGL RYEE FVREEIDW+TLQWLTEEDL GIGV
Sbjct: 233 VPRGVEG-PVCGPKKVVVSPVVKWLRNLGLERYEEDFVREEIDWETLQWLTEEDLFGIGV 291
Query: 277 TALGPRKKILHTLCEIKKEYSRAVESNKDAHVSND-GSSSYHGSERHKEASKVIVDGSSK 335
TALGPRKKI+H L E++K + A+E++ DAH + GS HG+E EASK+I D +SK
Sbjct: 292 TALGPRKKIVHALSELRKGSNHAIEAHGDAHAFGEVGSRRSHGAEMQVEASKIIGDDTSK 351
Query: 336 PAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTW 395
P ANKLITD+F GS+ KK S + Q G+ KS G RK+ K+ +K K KDIP W
Sbjct: 352 PTANKLITDYFPGSVPIKKKTSVISKEQRGAEKSQPGYVRKQ-GVKNYTKKGKFKDIPLW 410
Query: 396 CCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
C +PGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF HGKIYCSLITA+LVN+KIG
Sbjct: 411 CSIPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITAKLVNLKIG 470
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
IPWD L VLPLNQK IAG+DVTCL+ANHCPGSIIILFEP NGKAVLHTGDFRFSE+M +
Sbjct: 471 IPWDSLHVLPLNQKICIAGVDVTCLDANHCPGSIIILFEPPNGKAVLHTGDFRFSEKMVT 530
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
M VLQ IHTLILDTTYCN YDFPKQEAVIQFVIEAIQAE+FNPKTLFLIGSYTIGKE
Sbjct: 531 MPVLQMSSIHTLILDTTYCNAQYDFPKQEAVIQFVIEAIQAEAFNPKTLFLIGSYTIGKE 590
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
RLFLEVARVL KK+YVN AKFR+L+CL F +ED++W T NE ESHIHV+PMWTLASFKRL
Sbjct: 591 RLFLEVARVLHKKVYVNMAKFRLLECLGFPEEDMRWITLNEQESHIHVVPMWTLASFKRL 650
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEF 695
KH+S+QYAGRF+LIVAFSPTGWTF KGKKKSPGRR QQGTIIRYEVPYSEHCSFTEL+EF
Sbjct: 651 KHLSSQYAGRFTLIVAFSPTGWTFGKGKKKSPGRRCQQGTIIRYEVPYSEHCSFTELREF 710
Query: 696 VKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
VKFVSPE+IIPSVNNDG DSAN MVSLLL+
Sbjct: 711 VKFVSPENIIPSVNNDGPDSANDMVSLLLS 740
>gi|359475989|ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
Length = 842
Score = 860 bits (2221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/756 (60%), Positives = 541/756 (71%), Gaps = 58/756 (7%)
Query: 2 PTKRTVSQPISTAYDDDDFQ-VPLSQTPKFTTTISKKQKIPLKPSNNPSRPSKKPKPVTN 60
P+ VS I+ + DDDDFQ +PL+Q + PLKPS++ RPSK+PK
Sbjct: 109 PSSSFVSLAIAMS-DDDDFQEIPLTQA----------TQQPLKPSDSSRRPSKRPKAAAT 157
Query: 61 L--GKENN---------IEGFYLNSDETCSLEAIPSSIDCTRPTACVDIDHSPECEEIKE 109
GKEN E L S + ++I S + R D + C +E
Sbjct: 158 AAPGKENVPPSRKKRDCSEREELKSKGSYLCDSIESRLLNARSGG----DGNITCGFSEE 213
Query: 110 ILKVNEG-YLRNSVESRLLRPRAADCR-----LSEESEEEEEDAVLDVLLKLCDKN---- 159
+EG Y NSVESRLL+ R+ EES+E+ E LDVL++LC +
Sbjct: 214 ----SEGSYSCNSVESRLLKSRSGGDGDGNGGFCEESDEDFEQ--LDVLIRLCSEGEEEP 267
Query: 160 DVNCNKIDES----------VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPK 209
D + + E VRCPLC IDISDLN+ELRQ HTN CLD+ E D V
Sbjct: 268 DSDGFRFREQRGSGSEGRGLVRCPLCEIDISDLNDELRQVHTNGCLDRLE---ADNVLRN 324
Query: 210 HERGPRL-EPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTE 268
+R + +P D ++ QK VDVSPV+ ++HSLGL RYEEAF+REEIDWDTLQ LTE
Sbjct: 325 GDRECQFPQPFNDGSPVQTHQKVVDVSPVIGWIHSLGLGRYEEAFIREEIDWDTLQRLTE 384
Query: 269 EDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDA-HVSNDGSSSYHGSERHKEASK 327
EDL+ IGVTALGPRK+I+H L E++K + V+ + +S S HG E +ASK
Sbjct: 385 EDLLNIGVTALGPRKRIVHALSELRKGSTHTVDIHTHVPALSELRKQSTHGVEIEADASK 444
Query: 328 VIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGR 387
VD +SK AANKLITD+F GS+T+ + + + + K GS RK+ K+ ++
Sbjct: 445 ATVDETSKLAANKLITDYFPGSVTDRSRGCISSGERKAAEKIQLGSSRKQVVVKNHARSG 504
Query: 388 KHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
K +D+P WCC+PGTPFRVDAF+YLR DCSHWFLTHFH+DHYQGLTRSF HGKIYCS ITA
Sbjct: 505 KLRDLPLWCCIPGTPFRVDAFRYLRRDCSHWFLTHFHLDHYQGLTRSFCHGKIYCSAITA 564
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
RLVNMKIGIPWDRLQ+LPLNQK I G+DVTCL+ANHCPGSIIILFEP NGKAVLHTGDF
Sbjct: 565 RLVNMKIGIPWDRLQILPLNQKINIDGVDVTCLDANHCPGSIIILFEPSNGKAVLHTGDF 624
Query: 508 RFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
RFSEEM SMSVLQ CPIHTLILDTTYCNP YDFPKQEAVIQFVI+AIQAE+FNP+TLFLI
Sbjct: 625 RFSEEMTSMSVLQMCPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLI 684
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
GSYTIGKERLFLEVARVLRKK+YVNAAK +L+CL+F KED+QWFT NE ESHIHV+PMW
Sbjct: 685 GSYTIGKERLFLEVARVLRKKVYVNAAKLHILECLEFQKEDMQWFTLNEQESHIHVVPMW 744
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
TLASFKRLKH+SNQYAGRFSLIVAFSPTGWTF KGKKK+PGRRWQQGTIIRYEVPYSEH
Sbjct: 745 TLASFKRLKHISNQYAGRFSLIVAFSPTGWTFGKGKKKTPGRRWQQGTIIRYEVPYSEHS 804
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
SFTEL+EFVKFVSP +IIPSVNN G +S + MV LL
Sbjct: 805 SFTELREFVKFVSPVNIIPSVNNHGSESVDTMVRLL 840
>gi|296081740|emb|CBI20745.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/742 (61%), Positives = 534/742 (71%), Gaps = 57/742 (7%)
Query: 16 DDDDFQ-VPLSQTPKFTTTISKKQKIPLKPSNNPSRPSKKPKPVTNL--GKENN------ 66
DDDDFQ +PL+Q + PLKPS++ RPSK+PK GKEN
Sbjct: 3 DDDDFQEIPLTQA----------TQQPLKPSDSSRRPSKRPKAAATAAPGKENVPPSRKK 52
Query: 67 ---IEGFYLNSDETCSLEAIPSSIDCTRPTACVDIDHSPECEEIKEILKVNEG-YLRNSV 122
E L S + ++I S + R D + C +E +EG Y NSV
Sbjct: 53 RDCSEREELKSKGSYLCDSIESRLLNARSGG----DGNITCGFSEE----SEGSYSCNSV 104
Query: 123 ESRLLRPRAADCR-----LSEESEEEEEDAVLDVLLKLCDKN----DVNCNKIDES---- 169
ESRLL+ R+ EES+E+ E LDVL++LC + D + + E
Sbjct: 105 ESRLLKSRSGGDGDGNGGFCEESDEDFEQ--LDVLIRLCSEGEEEPDSDGFRFREQRGSG 162
Query: 170 ------VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRL-EPEIDL 222
VRCPLC IDISDLN+ELRQ HTN CLD+ E D V +R + +P D
Sbjct: 163 SEGRGLVRCPLCEIDISDLNDELRQVHTNGCLDRLE---ADNVLRNGDRECQFPQPFNDG 219
Query: 223 GLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPR 282
++ QK VDVSPV+ ++HSLGL RYEEAF+REEIDWDTLQ LTEEDL+ IGVTALGPR
Sbjct: 220 SPVQTHQKVVDVSPVIGWIHSLGLGRYEEAFIREEIDWDTLQRLTEEDLLNIGVTALGPR 279
Query: 283 KKILHTLCEIKKEYSRAVESNKDA-HVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
K+I+H L E++K + V+ + +S S HG E +ASK VD +SK AANKL
Sbjct: 280 KRIVHALSELRKGSTHTVDIHTHVPALSELRKQSTHGVEIEADASKATVDETSKLAANKL 339
Query: 342 ITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGT 401
ITD+F GS+T+ + + + + K GS RK+ K+ ++ K +D+P WCC+PGT
Sbjct: 340 ITDYFPGSVTDRSRGCISSGERKAAEKIQLGSSRKQVVVKNHARSGKLRDLPLWCCIPGT 399
Query: 402 PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL 461
PFRVDAF+YLR DCSHWFLTHFH+DHYQGLTRSF HGKIYCS ITARLVNMKIGIPWDRL
Sbjct: 400 PFRVDAFRYLRRDCSHWFLTHFHLDHYQGLTRSFCHGKIYCSAITARLVNMKIGIPWDRL 459
Query: 462 QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
Q+LPLNQK I G+DVTCL+ANHCPGSIIILFEP NGKAVLHTGDFRFSEEM SMSVLQ
Sbjct: 460 QILPLNQKINIDGVDVTCLDANHCPGSIIILFEPSNGKAVLHTGDFRFSEEMTSMSVLQM 519
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
CPIHTLILDTTYCNP YDFPKQEAVIQFVI+AIQAE+FNP+TLFLIGSYTIGKERLFLEV
Sbjct: 520 CPIHTLILDTTYCNPQYDFPKQEAVIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEV 579
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
ARVLRKK+YVNAAK +L+CL+F KED+QWFT NE ESHIHV+PMWTLASFKRLKH+SNQ
Sbjct: 580 ARVLRKKVYVNAAKLHILECLEFQKEDMQWFTLNEQESHIHVVPMWTLASFKRLKHISNQ 639
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
YAGRFSLIVAFSPTGWTF KGKKK+PGRRWQQGTIIRYEVPYSEH SFTEL+EFVKFVSP
Sbjct: 640 YAGRFSLIVAFSPTGWTFGKGKKKTPGRRWQQGTIIRYEVPYSEHSSFTELREFVKFVSP 699
Query: 702 EHIIPSVNNDGRDSANAMVSLL 723
+IIPSVNN G +S + MV LL
Sbjct: 700 VNIIPSVNNHGSESVDTMVRLL 721
>gi|357465917|ref|XP_003603243.1| DNA cross-link repair 1A protein [Medicago truncatula]
gi|355492291|gb|AES73494.1| DNA cross-link repair 1A protein [Medicago truncatula]
Length = 671
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/718 (59%), Positives = 514/718 (71%), Gaps = 71/718 (9%)
Query: 16 DDDDFQVPLSQTPKFTTTISKKQKIPLKPSNNPS-RPSKKPKP--VTNLGKENNIEGFYL 72
D+DDF+VPL+QT + I K PL SNN + RPSKKPK T+ + NI F
Sbjct: 13 DNDDFEVPLTQT---QSPILK----PLSQSNNQNQRPSKKPKTNKTTSFPGKENIPPFEG 65
Query: 73 NSDETCSLEAIPSSIDCTRPTACVDIDHSPECEEIKEILKVNE-GYLRNSVESRLLRPRA 131
SL+ +PS++D D + + E+ K N+ Y NS+ESRL+ R
Sbjct: 66 YDIGNSSLDFVPSTLDS---------DSTVFSSPVSELKKSNKRDYFSNSLESRLVASRK 116
Query: 132 ADCRLSEESEEEEEDAVLDVLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAHT 191
D+ + LCD+ SV CPLCG+DIS+L EE R HT
Sbjct: 117 N---------------AFDLEVNLCDE-------FGSSVDCPLCGVDISNLTEEQRNLHT 154
Query: 192 NNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEE 251
N+CLDK +DV P + G + P+ SPVVE++ LGLA+YEE
Sbjct: 155 NDCLDK---SGEDVAPPNDDVGAQFGPK--------------NSPVVEWIRGLGLAKYEE 197
Query: 252 AFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAV------ESNKD 305
FVREE+DWDTLQWLTEEDL+ +G+TALGPRKKI+H L E+++ + E ++D
Sbjct: 198 VFVREEVDWDTLQWLTEEDLLNMGITALGPRKKIVHALSELRRGITLGTTSSSSSEKHED 257
Query: 306 AHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSG 365
A V + + +H ++ + VDG+ KP ANKLIT++F G T+ KKVS P ++
Sbjct: 258 AEVEPRRTRNQKSKMQHDKSERK-VDGTVKPVANKLITEYFPGFATSGKKVSAPPVERNE 316
Query: 366 SRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHM 425
+ S GS +K AK+ S K +DIP WC + GTPFRVDAFKYLRGDCSHWFLTHFHM
Sbjct: 317 TNTS--GSSDRKRKAKNISTSTKIRDIPKWCAIQGTPFRVDAFKYLRGDCSHWFLTHFHM 374
Query: 426 DHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHC 485
DHYQGLT+SF+HGKIYCS +TARLVNM IGIP+D+L +LPLNQK IAGI VTCL+ANHC
Sbjct: 375 DHYQGLTKSFNHGKIYCSSVTARLVNMNIGIPYDKLHILPLNQKVEIAGIGVTCLDANHC 434
Query: 486 PGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEA 545
PGSIIILFEP N VLHTGDFR+SEEMA+ +LQTCPIHTLILDTTYCNP YDFPKQEA
Sbjct: 435 PGSIIILFEPPN---VLHTGDFRYSEEMANNPLLQTCPIHTLILDTTYCNPQYDFPKQEA 491
Query: 546 VIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
VIQFVI+AIQAE+FNP+TLFLIGSYTIGKERLFLEVAR L +K+YV AAK R+LKCL+F+
Sbjct: 492 VIQFVIDAIQAEAFNPRTLFLIGSYTIGKERLFLEVARSLHQKVYVTAAKLRLLKCLEFT 551
Query: 606 KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK 665
+ED+QWFT+NEHES+IHV PMWTLASFKRLKH+S+QYA RFSLIVAFSPTGWTF KGKKK
Sbjct: 552 EEDMQWFTSNEHESNIHVAPMWTLASFKRLKHISSQYASRFSLIVAFSPTGWTFGKGKKK 611
Query: 666 SPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
SPGRRWQQGTIIRYEVPYSEHCSFTELKEFV FVSP++IIPSVNNDG +SA+AMVSL+
Sbjct: 612 SPGRRWQQGTIIRYEVPYSEHCSFTELKEFVNFVSPDNIIPSVNNDGPESADAMVSLM 669
>gi|356518191|ref|XP_003527765.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 678
Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/715 (57%), Positives = 514/715 (71%), Gaps = 47/715 (6%)
Query: 16 DDDDFQVPLSQTPKFTTTISKKQKIPLKPSNNPSRPSKKPKPVTNLGKENNIEGFYLNSD 75
++D+F++PL+QT TT + NN RPSKKPK T+ G D
Sbjct: 6 NNDEFEIPLTQT----TTAFHAALASIDDDNN-QRPSKKPKRKTSEGG--------CEID 52
Query: 76 ETCSLEAIPSSIDCT-----RPTACVDIDHSPECEEIKEILKVNEGYLRNSVESRLLRPR 130
CSL+ IPS+I C +P D LK YLRNS+ES+L+ R
Sbjct: 53 NCCSLDFIPSTIGCVSACSVQPLGEEDSVSPSSSTASLSELKTKGNYLRNSIESKLVVSR 112
Query: 131 AADCRLSEESEEEEEDAVLDVLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAH 190
A ++ + D+ LD+L+ LCD+ ++D SVRCPLC +DIS+L EE R H
Sbjct: 113 ANALNRADA----DSDSELDLLMNLCDE----LEEVDSSVRCPLCEVDISNLTEEQRHLH 164
Query: 191 TNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYE 250
TNNCLD VV +E+G + P+ V+ VV++L LGL +YE
Sbjct: 165 TNNCLDDVA-----VVPDDNEKGAQQVPK--------------VASVVDWLRGLGLNKYE 205
Query: 251 EAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSN 310
+ FVREE+DWDTLQWLTEEDL+ +G+ ALGPR+KI+H L E++K + A E ++D+
Sbjct: 206 DVFVREEVDWDTLQWLTEEDLLSMGIAALGPRRKIVHALSELRKGDAAANEKHEDSSAEP 265
Query: 311 DGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSF 370
+ +H ++ + VDG+ KP ANKLIT++F G + KKVS + G+ +K+
Sbjct: 266 RRIRNQKVKLKHDKSERK-VDGTGKPVANKLITEYFPGFASKEKKVSA-SPGEPQEKKNS 323
Query: 371 SGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQG 430
+KH +K+ RK +D+P WC V GTPFRVDAFKYLRGDCSHWFLTHFH+DHYQG
Sbjct: 324 GLDSGRKHKSKNTPTNRKLRDVPKWCAVQGTPFRVDAFKYLRGDCSHWFLTHFHLDHYQG 383
Query: 431 LTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSII 490
LT+SF+HGKIYCS +TARLVNM IGIP+D+L VLPLNQK IAG+DVTCL+ANHCPGSII
Sbjct: 384 LTKSFNHGKIYCSSVTARLVNMNIGIPYDKLHVLPLNQKVEIAGVDVTCLDANHCPGSII 443
Query: 491 ILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFV 550
ILF+P NGKAVLHTGDFRFSEEMA +++ CPI+TLILDTTYCNP YDFPKQE+VIQFV
Sbjct: 444 ILFQPPNGKAVLHTGDFRFSEEMAVNPLMRICPINTLILDTTYCNPQYDFPKQESVIQFV 503
Query: 551 IEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ 610
I+A+QAE+FNPKTLFLIGSYTIGKERLFLEVAR LRKK++V AAK R+LKCL+ +ED+Q
Sbjct: 504 IDAVQAETFNPKTLFLIGSYTIGKERLFLEVARSLRKKVHVTAAKLRILKCLELKEEDMQ 563
Query: 611 WFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR 670
WFT+NEHES+IHV PMWTLASFKRLKH+S+QY +++LIVAFSPTGWTF KGKKKS GRR
Sbjct: 564 WFTSNEHESNIHVAPMWTLASFKRLKHISSQYKSQYNLIVAFSPTGWTFGKGKKKSTGRR 623
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
WQQGTIIRYEVPYSEH SFTELKEFV+ VSP++IIPSVNNDG +S++AM+SLLL+
Sbjct: 624 WQQGTIIRYEVPYSEHSSFTELKEFVRVVSPDNIIPSVNNDGPESSDAMISLLLS 678
>gi|449486809|ref|XP_004157409.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101218609
[Cucumis sativus]
Length = 774
Score = 781 bits (2016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/779 (54%), Positives = 511/779 (65%), Gaps = 91/779 (11%)
Query: 12 STAYDDDDFQVPLSQTPKFTTTISKKQKIPLKPSN------NPSRPSKKPKPVTNLGKEN 65
+ A D+DDF P T +S + + PL S+ P RP + + T GKEN
Sbjct: 21 TNAGDEDDF------LPSTQTLLSSRSQKPLATSDLSLHISTPKRPRRSTQTAT--GKEN 72
Query: 66 NIEGFYLNS-----------------------DETCSLEAI-PSSIDCTRPTACV----- 96
Y + D CSL+ I PS + C+ T V
Sbjct: 73 VPSITYRDVGFKRQKNGAVALDDGEVFGASDIDLGCSLDLIQPSIVGCSYETHDVNSGEE 132
Query: 97 ----DIDHSPECEEIKEILKVNEGYLRNSVESRLLRPRA-ADCRLSEESEEE------EE 145
D S +E K K GYL NS+ESRL+ R D +S +++ E
Sbjct: 133 IVDGDDKFSGAIDECKGS-KGKGGYLVNSIESRLVNSRVDYDIGVSGSGDDKVSGDDFES 191
Query: 146 DAVLDVLLKL---CDKNDVNCNK-----------IDES--VRCPLCGIDISDLNEELRQA 189
D LD+LL L D+ D N+ +DE ++CPLCG+DISDL++E R
Sbjct: 192 DTELDLLLNLHSELDEED-GINREGFGIEATDFMLDEEGLIQCPLCGVDISDLSDEQRLV 250
Query: 190 HTNNCLDKCENQAQDVVFP---KHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGL 246
HTN+C+DK + +AQ+V K GPR S V+++LH LGL
Sbjct: 251 HTNDCIDKVDAEAQNVALTPDKKQTSGPRQSDNSKF------------STVLKWLHDLGL 298
Query: 247 ARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDA 306
++YE FVREE+DWDTLQWLT+EDL +G+TALGPR+KI H L E++KE S S
Sbjct: 299 SKYEGLFVREEVDWDTLQWLTDEDLNNMGITALGPRRKITHALSELRKESSLVETSTNSR 358
Query: 307 HVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGS 366
S+ G S +GS+ +E S +G++K NKLITD+F G TN K + ++ Q
Sbjct: 359 AYSSTGQQSNNGSD-GREGS---TNGTNKTPPNKLITDYFPGFATNXKNPCSSSSVQKDV 414
Query: 367 RKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMD 426
K S K AK + RK ++P W C+PGTPFRVDAF++LRGDC HWFLTHFHMD
Sbjct: 415 GKKIPDSLNKGKTAKRNVRNRKLGNVPVWSCIPGTPFRVDAFRHLRGDCFHWFLTHFHMD 474
Query: 427 HYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCP 486
HYQGLT+SF HG IYCS ITA+LVNMKIGIPW+RLQVLPL+QK IAG+DVTC +ANHCP
Sbjct: 475 HYQGLTKSFCHGMIYCSTITAKLVNMKIGIPWERLQVLPLDQKINIAGVDVTCFDANHCP 534
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
GSIIILFEP NGKAVLHTGDFRF E+M +SV QTC IHTL+LDTTYC+P YDFPKQE V
Sbjct: 535 GSIIILFEPPNGKAVLHTGDFRFCEQMGGLSVFQTCRIHTLVLDTTYCDPQYDFPKQETV 594
Query: 547 IQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK 606
IQFVI+AIQAE+FNPKTLFLIG YTIGKERLFLEVARVLRKK+YV AAK R+LKCL FS
Sbjct: 595 IQFVIDAIQAEAFNPKTLFLIGCYTIGKERLFLEVARVLRKKVYVTAAKLRILKCLGFSA 654
Query: 607 EDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
ED++WFT NE ESHIHV+P+WTLASFKRLKH+S QYA RFSLIVAFSPTGW SKGKKKS
Sbjct: 655 EDMKWFTVNERESHIHVVPLWTLASFKRLKHVSTQYANRFSLIVAFSPTGWALSKGKKKS 714
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
PGRRWQQGTIIRYEVPYSEH SF+ELK+FVK VSP +IIPSVNN G DSA AM SLLL+
Sbjct: 715 PGRRWQQGTIIRYEVPYSEHSSFSELKDFVKLVSPANIIPSVNNHGPDSARAMTSLLLS 773
>gi|297828291|ref|XP_002882028.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327867|gb|EFH58287.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 780 bits (2015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/734 (57%), Positives = 520/734 (70%), Gaps = 46/734 (6%)
Query: 16 DDDDFQVPLSQTPKFTTTISKKQKIPLKPSN-----NPSRPSKKPKPVTNLGKEN----- 65
DDDDFQ+P P +I K PL+P+N + P+KKP+ N GKEN
Sbjct: 8 DDDDFQIP----PSSQLSIRK----PLQPTNANNFSHRRPPNKKPRLSRNPGKENVTPPP 59
Query: 66 --NIEGFYLNSDETCSLEAIPSSIDCT-RPTACVDIDHSPECEEIKEILKVN-EGYLRNS 121
+ + +S CSL+ IPSS+DC+ P + + D + ++ +KVN EGYL NS
Sbjct: 60 SPDADLLCSSSTPHCSLDCIPSSVDCSIGPISSLGEDDKVDKDDC---IKVNREGYLCNS 116
Query: 122 VESRLLRPR---AADCRLSEESEE-EEEDAVLDVLLKLCDKNDVNCNKI----DESVRCP 173
+E+RLL+ R D + E+ EE E ++ LDVL+KLC +++ + D+S++CP
Sbjct: 117 MEARLLKSRIRLGFDRGIHEDDEEFVESNSELDVLIKLCSESEGRSGECSLGNDDSIQCP 176
Query: 174 LCGIDISDLNEELRQAHTNNCLDKCENQA--QDVVFPKHERGPRLEPEIDLGLGRSPQKA 231
LC +DIS L+EE RQ H+N CLDK +Q QD + +E D + + PQ
Sbjct: 177 LCSMDISALSEEQRQVHSNTCLDKSYDQPPEQDSLRKCDNSSSLIEESTDDPV-QLPQLV 235
Query: 232 VDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCE 291
D+SPV+++L SLGLA+YE+ F+REEIDWDTLQ LTEEDL+ IG+T+LGPRKKI++ LC
Sbjct: 236 TDLSPVLKWLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALCG 295
Query: 292 IKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEAS-KVIVDGSSKPAANKLITDFFLGSI 350
+++ ++ + E++ +H + S H +ER ++ S KP ANKLIT+FF G
Sbjct: 296 LREPFASSAEAHAQSHCT-----SGHVTERRRDKSTNRWASEPKKPTANKLITEFFPGQA 350
Query: 351 TNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY 410
T K+ R + R+ A + K K IP W C+PGTPFRVDAFKY
Sbjct: 351 TEGMKIRKAPKEPVVERSPSDLNSRR--AVRRNGNNGKSKVIPHWNCIPGTPFRVDAFKY 408
Query: 411 LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT 470
L DC HWFLTHFH+DHYQGLT+SF HGKIYCSL+TA+LVNMKIGIPW+RLQVL L QK
Sbjct: 409 LTRDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKIGIPWERLQVLDLGQKV 468
Query: 471 TIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILD 530
IAGIDVTC +ANHCPGSI+ILFEP NGKAVLHTGDFR+SEEM+ L I++LILD
Sbjct: 469 NIAGIDVTCFDANHCPGSIMILFEPTNGKAVLHTGDFRYSEEMSDW--LIGSQINSLILD 526
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIY 590
TTYCNP YDFPKQEAVIQFV+EAIQAE+FNPKTLFLIGSYTIGKERLFLEVARVLR+KIY
Sbjct: 527 TTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLREKIY 586
Query: 591 VNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
+N +K ++L+CL FSKED+QWFT E ESHIHV+P+WTLASFKRLKH++N+Y R+SLIV
Sbjct: 587 INPSKLKLLECLGFSKEDMQWFTVKEEESHIHVVPLWTLASFKRLKHIANRYTNRYSLIV 646
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
FSPTGWT SK KKKSPGRR QQGTIIRYEVPYSEH SFTELKEFV+ SPE IIPSVNN
Sbjct: 647 TFSPTGWTSSKTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKASPEVIIPSVNN 706
Query: 711 DGRDSANAMVSLLL 724
DG DSA AMVSLL+
Sbjct: 707 DGPDSAAAMVSLLV 720
>gi|449447365|ref|XP_004141439.1| PREDICTED: uncharacterized protein LOC101218609 [Cucumis sativus]
Length = 774
Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/779 (54%), Positives = 511/779 (65%), Gaps = 91/779 (11%)
Query: 12 STAYDDDDFQVPLSQTPKFTTTISKKQKIPLKPSN------NPSRPSKKPKPVTNLGKEN 65
+ A D+DDF P T +S + + PL S+ P RP + + T GKEN
Sbjct: 21 TNAGDEDDF------LPSTQTLLSSRSQKPLATSDLSLHISTPKRPRRSTQTAT--GKEN 72
Query: 66 NIEGFYLNS-----------------------DETCSLEAI-PSSIDCTRPTACV----- 96
Y + D CSL+ I PS + C+ T V
Sbjct: 73 VPSITYRDVGFKRQKNGAVALDDGEVFGASDIDLGCSLDLIQPSIVGCSYETHDVNSGEE 132
Query: 97 ----DIDHSPECEEIKEILKVNEGYLRNSVESRLLRPRA-ADCRLSEESEEE------EE 145
D S +E K K GYL NS+ESRL+ R D +S +++ E
Sbjct: 133 IVDGDDKFSGAIDECKGS-KGKGGYLVNSIESRLVNSRVDYDIGVSGSGDDKVSGDDFES 191
Query: 146 DAVLDVLLKL---CDKNDVNCNK-----------IDES--VRCPLCGIDISDLNEELRQA 189
D LD+LL L D+ D N+ +DE ++CPLCG+DISDL++E R
Sbjct: 192 DTELDLLLNLHSELDEED-GINREGFGIEATDFMLDEEGLIQCPLCGVDISDLSDEQRLV 250
Query: 190 HTNNCLDKCENQAQDVVFP---KHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGL 246
HTN+C+DK + +AQ+V K GPR S V+++LH LGL
Sbjct: 251 HTNDCIDKVDAEAQNVALTPDKKQTSGPRQSDNSKF------------STVLKWLHDLGL 298
Query: 247 ARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDA 306
++YE FVREE+DWDTLQWLT+EDL +G+TALGPR+KI H L E++KE S S
Sbjct: 299 SKYEGLFVREEVDWDTLQWLTDEDLNNMGITALGPRRKITHALSELRKESSLVETSTNSR 358
Query: 307 HVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGS 366
S+ G S +GS+ +E S +G++K NKLITD+F G TN K + ++ Q
Sbjct: 359 AYSSTGQQSNNGSD-GREGS---TNGTNKTPPNKLITDYFPGFATNKKNPCSSSSVQKDV 414
Query: 367 RKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMD 426
K S K AK + RK ++P W C+PGTPFRVDAF++LRGDC HWFLTHFHMD
Sbjct: 415 GKKIPDSLNKGKTAKRNVRNRKLGNVPVWSCIPGTPFRVDAFRHLRGDCFHWFLTHFHMD 474
Query: 427 HYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCP 486
HYQGLT+SF HG IYCS ITA+LVNMKIGIPW+RLQVLPL+QK IAG+DVTC +ANHCP
Sbjct: 475 HYQGLTKSFCHGMIYCSTITAKLVNMKIGIPWERLQVLPLDQKINIAGVDVTCFDANHCP 534
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
GSIIILFEP NGKAVLHTGDFRF E+M +SV QTC IHTL+LDTTYC+P YDFPKQE V
Sbjct: 535 GSIIILFEPPNGKAVLHTGDFRFCEQMGGLSVFQTCRIHTLVLDTTYCDPQYDFPKQETV 594
Query: 547 IQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK 606
IQFVI+AIQAE+FNPKTLFLIG YTIGKERLFLEVARVLRKK+YV AAK R+LKCL FS
Sbjct: 595 IQFVIDAIQAEAFNPKTLFLIGCYTIGKERLFLEVARVLRKKVYVTAAKLRILKCLGFSA 654
Query: 607 EDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
ED++WFT NE ESHIHV+P+WTLASFKRLKH+S QYA RFSLIVAFSPTGW SKGKKKS
Sbjct: 655 EDMKWFTVNERESHIHVVPLWTLASFKRLKHVSTQYANRFSLIVAFSPTGWALSKGKKKS 714
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
PGRRWQQGTIIRYEVPYSEH SF+ELK+FVK VSP +IIPSVNN G DSA AM SLLL+
Sbjct: 715 PGRRWQQGTIIRYEVPYSEHSSFSELKDFVKLVSPANIIPSVNNHGPDSARAMTSLLLS 773
>gi|15225548|ref|NP_182094.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
gi|3386625|gb|AAC28555.1| hypothetical protein [Arabidopsis thaliana]
gi|20197051|gb|AAM14896.1| hypothetical protein [Arabidopsis thaliana]
gi|28973723|gb|AAO64178.1| unknown protein [Arabidopsis thaliana]
gi|29824257|gb|AAP04089.1| unknown protein [Arabidopsis thaliana]
gi|110736829|dbj|BAF00373.1| hypothetical protein [Arabidopsis thaliana]
gi|330255495|gb|AEC10589.1| sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
Length = 723
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/734 (57%), Positives = 520/734 (70%), Gaps = 44/734 (5%)
Query: 16 DDDDFQVPLSQTPKFTTTISKKQKIPLKPSN--NPSR--PSKKPKPVTNLGKEN------ 65
DDDDFQ+P P +I K PL P+N N S P+KKP+ GKEN
Sbjct: 8 DDDDFQIP----PSSQLSIRK----PLHPTNANNISHRPPNKKPRLCRYPGKENVTPPPS 59
Query: 66 -NIEGFYLNSDETCSLEAIPSSIDCTRPTACVDIDHSPE--CEEIKEILKVN-EGYLRNS 121
+ + F +S C L+ IPSS+DC+ I E E+ + +KVN EGYL NS
Sbjct: 60 PDPDLFCSSSTPHCILDCIPSSVDCSLGDFNGPISSLGEEDKEDKDDCIKVNREGYLCNS 119
Query: 122 VESRLLRPR---AADCRLSEESEE-EEEDAVLDVLLKLCDKNDVNCNKI----DESVRCP 173
+E+RLL+ R D + E+ E E ++ LDVL+ LC +++ + D+S++CP
Sbjct: 120 MEARLLKSRICLGFDSGIHEDDEGFVESNSELDVLINLCSESEGRSGEFSLGKDDSIQCP 179
Query: 174 LCGIDISDLNEELRQAHTNNCLDKCENQA--QDVVFPKHERGPRLEPEIDLGLGRSPQKA 231
LC +DIS L+EE RQ H+N CLDK NQ QD + ++ ID + + PQ
Sbjct: 180 LCSMDISSLSEEQRQVHSNTCLDKSYNQPSEQDSLRKCENLSSLIKESIDDPV-QLPQLV 238
Query: 232 VDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCE 291
D+SPV+++L SLGLA+YE+ F+REEIDWDTLQ LTEEDL+ IG+T+LGPRKKI++ L
Sbjct: 239 TDLSPVLKWLRSLGLAKYEDVFIREEIDWDTLQSLTEEDLLSIGITSLGPRKKIVNALSG 298
Query: 292 IKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKV-IVDGSSKPAANKLITDFFLGSI 350
++ ++ + E +H + S H +ER ++ S KP ANKLIT+FF G
Sbjct: 299 VRDPFASSAEVQAQSHCT-----SGHVTERQRDKSTTRKASEPKKPTANKLITEFFPGQA 353
Query: 351 TNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY 410
T K+ T + + KS S S ++ ++ + G K K IP W C+PGTPFRVDAFKY
Sbjct: 354 TEGTKIRTAP--KPVAEKSPSDSSSRRAVRRNGNNG-KSKVIPHWNCIPGTPFRVDAFKY 410
Query: 411 LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT 470
L DC HWFLTHFH+DHYQGLT+SF HGKIYCSL+TA+LVNMKIGIPW+RLQVL L QK
Sbjct: 411 LTRDCCHWFLTHFHLDHYQGLTKSFSHGKIYCSLVTAKLVNMKIGIPWERLQVLDLGQKV 470
Query: 471 TIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILD 530
I+GIDVTC +ANHCPGSI+ILFEP NGKAVLHTGDFR+SEEM++ L I +LILD
Sbjct: 471 NISGIDVTCFDANHCPGSIMILFEPANGKAVLHTGDFRYSEEMSNW--LIGSHISSLILD 528
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIY 590
TTYCNP YDFPKQEAVIQFV+EAIQAE+FNPKTLFLIGSYTIGKERLFLEVARVLR+KIY
Sbjct: 529 TTYCNPQYDFPKQEAVIQFVVEAIQAEAFNPKTLFLIGSYTIGKERLFLEVARVLREKIY 588
Query: 591 VNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
+N AK ++L+CL FSK+DIQWFT E ESHIHV+P+WTLASFKRLKH++N+Y R+SLIV
Sbjct: 589 INPAKLKLLECLGFSKDDIQWFTVKEEESHIHVVPLWTLASFKRLKHVANRYTNRYSLIV 648
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
AFSPTGWT K KKKSPGRR QQGTIIRYEVPYSEH SFTELKEFV+ VSPE IIPSVNN
Sbjct: 649 AFSPTGWTSGKTKKKSPGRRLQQGTIIRYEVPYSEHSSFTELKEFVQKVSPEVIIPSVNN 708
Query: 711 DGRDSANAMVSLLL 724
DG DSA AMVSLL+
Sbjct: 709 DGPDSAAAMVSLLV 722
>gi|125605833|gb|EAZ44869.1| hypothetical protein OsJ_29509 [Oryza sativa Japonica Group]
Length = 967
Score = 724 bits (1869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/576 (61%), Positives = 436/576 (75%), Gaps = 44/576 (7%)
Query: 157 DKNDVNCNKIDES--VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGP 214
+ N ++C + S V+CPLCG +ISDL+EELR HTN+CLD + P
Sbjct: 428 EGNGMDCGSFNSSCEVQCPLCGSNISDLSEELRLVHTNSCLDGDK--------------P 473
Query: 215 RLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGI 274
EP D + V+ V+E+L +LGL++YEE F++EE+DW+TLQWLTEEDL+G+
Sbjct: 474 AKEPNSDNQNEPCGESNVEKRRVMEWLRNLGLSKYEEIFIKEEVDWETLQWLTEEDLLGM 533
Query: 275 GVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSS 334
G+T+LGPRKKI H LCE++K+ N DA ND ++ E K+A K+ ++G
Sbjct: 534 GITSLGPRKKIAHALCELRKK-------NNDA---NDLAADMLNLENTKKA-KIPMNG-- 580
Query: 335 KPAANKLITDFFLGSITNVK-----KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKH 389
NKLIT++F ++ + KV+TP+N S + S+ K + KG K
Sbjct: 581 ----NKLITEYFRCPSSDQRQKKACKVNTPSNLNSQKK-----SNAKATGGRRTVKG-KV 630
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
KD P WCC+PGTPFRVDAF+YLRGDC HWFLTHFH+DHYQGLT+SF HGKIYCS +TA L
Sbjct: 631 KDTPIWCCIPGTPFRVDAFRYLRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANL 690
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V+ KIGIPWDRL VLPLN+K TIAG+++TC +ANHCPG++IILFEP NGKAVLHTGDFRF
Sbjct: 691 VHYKIGIPWDRLHVLPLNEKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRF 750
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
S EMA+ VLQ+ PIHTLILDTTYCNP YDFP QE VIQFVIEAIQAE+FNPKTLFLIGS
Sbjct: 751 SSEMANNRVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGS 810
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
YTIGKERL++EVAR+L+KKIYV AAK ++LK L +E + WFT NE ESHIHV+PMWTL
Sbjct: 811 YTIGKERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTL 870
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
ASFKR+K++S QYA RF LIVAF PTGW+F KGKK++PGR+WQQG IIRYEVPYSEH SF
Sbjct: 871 ASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVPYSEHSSF 930
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
TEL+EFV+F+SPEHIIPSVNNDG DSANAM++ LLN
Sbjct: 931 TELREFVRFISPEHIIPSVNNDGPDSANAMLAQLLN 966
>gi|115479355|ref|NP_001063271.1| Os09g0439000 [Oryza sativa Japonica Group]
gi|113631504|dbj|BAF25185.1| Os09g0439000 [Oryza sativa Japonica Group]
Length = 966
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/576 (61%), Positives = 436/576 (75%), Gaps = 44/576 (7%)
Query: 157 DKNDVNCNKIDES--VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGP 214
+ N ++C + S V+CPLCG +ISDL+EELR HTN+CLD + P
Sbjct: 427 EGNGMDCGSFNSSCEVQCPLCGSNISDLSEELRLVHTNSCLDGDK--------------P 472
Query: 215 RLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGI 274
EP D + V+ V+E+L +LGL++YEE F++EE+DW+TLQWLTEEDL+G+
Sbjct: 473 AKEPNSDNQNEPCGESNVEKRRVMEWLRNLGLSKYEEIFIKEEVDWETLQWLTEEDLLGM 532
Query: 275 GVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSS 334
G+T+LGPRKKI H LCE++K+ N DA ND ++ E K+A K+ ++G
Sbjct: 533 GITSLGPRKKIAHALCELRKK-------NNDA---NDLAADMLNLENTKKA-KIPMNG-- 579
Query: 335 KPAANKLITDFFLGSITNVK-----KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKH 389
NKLIT++F ++ + KV+TP+N S + S+ K + KG K
Sbjct: 580 ----NKLITEYFRCPSSDQRQKKACKVNTPSNLNSQKK-----SNAKATGGRRTVKG-KV 629
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
KD P WCC+PGTPFRVDAF+YLRGDC HWFLTHFH+DHYQGLT+SF HGKIYCS +TA L
Sbjct: 630 KDTPIWCCIPGTPFRVDAFRYLRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANL 689
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V+ KIGIPWDRL VLPLN+K TIAG+++TC +ANHCPG++IILFEP NGKAVLHTGDFRF
Sbjct: 690 VHYKIGIPWDRLHVLPLNEKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRF 749
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
S EMA+ VLQ+ PIHTLILDTTYCNP YDFP QE VIQFVIEAIQAE+FNPKTLFLIGS
Sbjct: 750 SSEMANNRVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGS 809
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
YTIGKERL++EVAR+L+KKIYV AAK ++LK L +E + WFT NE ESHIHV+PMWTL
Sbjct: 810 YTIGKERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTL 869
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
ASFKR+K++S QYA RF LIVAF PTGW+F KGKK++PGR+WQQG IIRYEVPYSEH SF
Sbjct: 870 ASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVPYSEHSSF 929
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
TEL+EFV+F+SPEHIIPSVNNDG DSANAM++ LLN
Sbjct: 930 TELREFVRFISPEHIIPSVNNDGPDSANAMLAQLLN 965
>gi|125563862|gb|EAZ09242.1| hypothetical protein OsI_31515 [Oryza sativa Indica Group]
Length = 966
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/576 (61%), Positives = 435/576 (75%), Gaps = 44/576 (7%)
Query: 157 DKNDVNCNKIDES--VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGP 214
+ N ++C + S V+CPLCG +ISDL+EELR HTN+CLD + P
Sbjct: 427 EGNGMDCGSFNSSCEVQCPLCGSNISDLSEELRLVHTNSCLDGDK--------------P 472
Query: 215 RLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGI 274
EP D + V+ V+E+L +LGL++YEE F++EE+DW+TLQWLTEEDL+G+
Sbjct: 473 AKEPNSDNQNEPCGESNVEKRRVMEWLRNLGLSKYEEIFIKEEVDWETLQWLTEEDLLGM 532
Query: 275 GVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSS 334
G+T+LGPRKKI H LCE++K+ N DA ND ++ E K+A K+ ++G
Sbjct: 533 GITSLGPRKKIAHALCELRKK-------NDDA---NDLAADMLNLENTKKA-KIPMNG-- 579
Query: 335 KPAANKLITDFFLGSITNVK-----KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKH 389
NKLIT++F ++ + KV+TP+N S S+ K + KG K
Sbjct: 580 ----NKLITEYFRCPSSDQRQKKACKVNTPSN-----LNSQKNSNAKATGGRRTVKG-KV 629
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
KD P WCC+PGTPFRVDAF+YLRGDC HWFLTHFH+DHYQGLT+SF HGKIYCS +TA L
Sbjct: 630 KDTPIWCCIPGTPFRVDAFRYLRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANL 689
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V+ KIGIPWDRL VLPLN+K TIAG+++TC +ANHCPG++IILFEP NGKAVLHTGDFRF
Sbjct: 690 VHYKIGIPWDRLHVLPLNEKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRF 749
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
S EMA+ VLQ+ PIHTLILDTTYCNP YDFP QE VIQFVIEAIQAE+FNPKTLFLIGS
Sbjct: 750 SSEMANNRVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGS 809
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
YTIGKERL++EVAR+L+KKIYV AAK ++LK L +E + WFT NE ESHIHV+PMWTL
Sbjct: 810 YTIGKERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTL 869
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
ASFKR+K++S QYA RF LIVAF PTGW+F KGKK++PGR+WQQG IIRYEVPYSEH SF
Sbjct: 870 ASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVPYSEHSSF 929
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
TEL+EFV+F+SPEHIIPSVNNDG DSANAM++ LLN
Sbjct: 930 TELREFVRFISPEHIIPSVNNDGPDSANAMLAQLLN 965
>gi|51091343|dbj|BAD36078.1| putative SNM1 [Oryza sativa Japonica Group]
gi|51091393|dbj|BAD36136.1| putative SNM1 [Oryza sativa Japonica Group]
Length = 1024
Score = 722 bits (1864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/576 (61%), Positives = 436/576 (75%), Gaps = 44/576 (7%)
Query: 157 DKNDVNCNKIDES--VRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGP 214
+ N ++C + S V+CPLCG +ISDL+EELR HTN+CLD + P
Sbjct: 485 EGNGMDCGSFNSSCEVQCPLCGSNISDLSEELRLVHTNSCLDGDK--------------P 530
Query: 215 RLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGI 274
EP D + V+ V+E+L +LGL++YEE F++EE+DW+TLQWLTEEDL+G+
Sbjct: 531 AKEPNSDNQNEPCGESNVEKRRVMEWLRNLGLSKYEEIFIKEEVDWETLQWLTEEDLLGM 590
Query: 275 GVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSS 334
G+T+LGPRKKI H LCE++K+ N DA ND ++ E K+A K+ ++G
Sbjct: 591 GITSLGPRKKIAHALCELRKK-------NNDA---NDLAADMLNLENTKKA-KIPMNG-- 637
Query: 335 KPAANKLITDFFLGSITNVK-----KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKH 389
NKLIT++F ++ + KV+TP+N S + S+ K + KG K
Sbjct: 638 ----NKLITEYFRCPSSDQRQKKACKVNTPSNLNSQKK-----SNAKATGGRRTVKG-KV 687
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
KD P WCC+PGTPFRVDAF+YLRGDC HWFLTHFH+DHYQGLT+SF HGKIYCS +TA L
Sbjct: 688 KDTPIWCCIPGTPFRVDAFRYLRGDCCHWFLTHFHVDHYQGLTKSFCHGKIYCSSVTANL 747
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V+ KIGIPWDRL VLPLN+K TIAG+++TC +ANHCPG++IILFEP NGKAVLHTGDFRF
Sbjct: 748 VHYKIGIPWDRLHVLPLNEKITIAGVNLTCFDANHCPGAVIILFEPSNGKAVLHTGDFRF 807
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
S EMA+ VLQ+ PIHTLILDTTYCNP YDFP QE VIQFVIEAIQAE+FNPKTLFLIGS
Sbjct: 808 SSEMANNRVLQSSPIHTLILDTTYCNPRYDFPTQEIVIQFVIEAIQAEAFNPKTLFLIGS 867
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
YTIGKERL++EVAR+L+KKIYV AAK ++LK L +E + WFT NE ESHIHV+PMWTL
Sbjct: 868 YTIGKERLYMEVARLLQKKIYVGAAKLQILKHLGLPQEIMHWFTANEAESHIHVVPMWTL 927
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
ASFKR+K++S QYA RF LIVAF PTGW+F KGKK++PGR+WQQG IIRYEVPYSEH SF
Sbjct: 928 ASFKRMKYLSTQYADRFDLIVAFCPTGWSFGKGKKRTPGRKWQQGAIIRYEVPYSEHSSF 987
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
TEL+EFV+F+SPEHIIPSVNNDG DSANAM++ LLN
Sbjct: 988 TELREFVRFISPEHIIPSVNNDGPDSANAMLAQLLN 1023
>gi|242049406|ref|XP_002462447.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor]
gi|241925824|gb|EER98968.1| hypothetical protein SORBIDRAFT_02g025710 [Sorghum bicolor]
Length = 963
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/575 (62%), Positives = 436/575 (75%), Gaps = 51/575 (8%)
Query: 167 DESVRCPLCGIDISDLNEELRQAHTNNCLD----KCENQAQDVVF-------PKHERGPR 215
D V+CPLCG DISDL+EELRQ HTNNCLD K +N A V+ P H++ P
Sbjct: 423 DYEVKCPLCGSDISDLSEELRQLHTNNCLDEPAKKLKNIAAFVLILYLMESSPNHKKEP- 481
Query: 216 LEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIG 275
+ V+ VVE+L +LGL++YEE F+REE+DW+TLQWLTEEDL+GIG
Sbjct: 482 -----------CAGQNVETGRVVEWLRNLGLSKYEEVFIREEVDWETLQWLTEEDLLGIG 530
Query: 276 VTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSK 335
+T+LGPRKKI+H L E++K++ E +D ++++ + + +K+ ++G
Sbjct: 531 ITSLGPRKKIIHALGELRKKHDDPCEV-EDVVLNSENT----------KKTKLPMNG--- 576
Query: 336 PAANKLITDFFLGSITN-----VKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHK 390
NKLIT++F S + V KV+ P+N + K S + K + KG K K
Sbjct: 577 ---NKLITEYFQCSSFDQRQRRVCKVNKPSNL---NEKKISSA--KIPTRRSAGKG-KVK 627
Query: 391 DIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
D P WCC+PGTPFRVDAF+YLRGDCSHWFLTHFH+DHYQGLTRSF HGKIYCS ITA LV
Sbjct: 628 DTPLWCCIPGTPFRVDAFRYLRGDCSHWFLTHFHVDHYQGLTRSFCHGKIYCSSITASLV 687
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ KIGIPWDRL VL LN+K TI G+ +TC +ANHCPGSIIILFEP NGKAVLHTGDFRFS
Sbjct: 688 HHKIGIPWDRLHVLTLNEKLTIGGVSLTCFDANHCPGSIIILFEPPNGKAVLHTGDFRFS 747
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSY 570
EMA+ VLQ+ IHTLILDTTYCNP YDFP QE VIQFVIEAIQAE+FNPKTLFLIGSY
Sbjct: 748 SEMANNPVLQSSHIHTLILDTTYCNPRYDFPSQEIVIQFVIEAIQAEAFNPKTLFLIGSY 807
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
TIGKERLF+EVAR+L+KKIYV AAK ++LK L+ +E + WFT NE ESHIHV+PMWTLA
Sbjct: 808 TIGKERLFMEVARLLQKKIYVGAAKLQILKHLELPQEIMHWFTANEAESHIHVVPMWTLA 867
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
SFKR+K++SNQYAG+F LIVAF PTGW F KG+KK+PG+RWQQG+IIRYEVPYSEH SFT
Sbjct: 868 SFKRMKYLSNQYAGQFDLIVAFCPTGWAFGKGRKKTPGKRWQQGSIIRYEVPYSEHSSFT 927
Query: 691 ELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
EL+EFVKF+SPEHIIPSVNNDG +SA+AM++ LLN
Sbjct: 928 ELQEFVKFISPEHIIPSVNNDGPESADAMLAQLLN 962
>gi|357153799|ref|XP_003576570.1| PREDICTED: uncharacterized protein LOC100843196 [Brachypodium
distachyon]
Length = 910
Score = 699 bits (1805), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/634 (55%), Positives = 452/634 (71%), Gaps = 58/634 (9%)
Query: 114 NEGYLRNSVESRLLRPRAADCRLSEESEEEEEDAVLDVLLKLCDKNDVN--------C-- 163
N + +SVE LL R +++ + E L+ L+ LC ++ V+ C
Sbjct: 312 NGCHCSDSVEPMLLESRKIHHFEADDCDNSEIGTQLNELINLCMEDQVDGHPAGRAPCVE 371
Query: 164 -NKIDESV-------RCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPR 215
NK+D V +CPLC DISDL+ EL+ AHTNNCLD+ E + HERGP
Sbjct: 372 GNKMDSGVFEPVYKVQCPLCRSDISDLSVELQLAHTNNCLDEGEPAKESK--SNHERGP- 428
Query: 216 LEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIG 275
+ ++ V+E+L +LGL++YEE F++EE+DW+TLQWLTEEDL+G+G
Sbjct: 429 -----------CAGENIENKCVLEWLRNLGLSKYEECFIKEEVDWETLQWLTEEDLLGMG 477
Query: 276 VTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSK 335
+ +LGPRKKI+H L E++K+ RA ++ + S + + + K+ ++G
Sbjct: 478 INSLGPRKKIVHALGELRKKNDRANDTEPEVLFSENNNRT-----------KLPMNG--- 523
Query: 336 PAANKLITDFFLGSITNVK----KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKD 391
NKLIT++F ++ K KV P+N S + S K ++ + K KD
Sbjct: 524 ---NKLITEYFQCFSSDQKQRDRKVQKPSNLNSQKK-----SSAKVATSRSLIRKGKVKD 575
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P WCC+PGTPFRVD+F+YLRGDCSHWFLTHFH+DHYQGLTRSF HGKI+CS ITA+LV+
Sbjct: 576 TPIWCCIPGTPFRVDSFRYLRGDCSHWFLTHFHLDHYQGLTRSFCHGKIFCSSITAKLVH 635
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
KIG+PWDR VLPLN++ T++G+++TC +ANHCPG+IIILFEP +G+A+LHTGDFRFS
Sbjct: 636 HKIGVPWDRFHVLPLNKRITVSGVNLTCFDANHCPGAIIILFEPPSGRAILHTGDFRFSS 695
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
EMA+ VLQ+ IHTLILDTTYC+P YDFP QE VIQFVIEAIQAE+FN KTLFLIGSYT
Sbjct: 696 EMANNPVLQSSHIHTLILDTTYCSPRYDFPSQETVIQFVIEAIQAEAFNKKTLFLIGSYT 755
Query: 572 IGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLAS 631
IGKERLF EV R+L+KKIYV AAK ++LK L+ +E + W T NE ES IHV+PMWTLAS
Sbjct: 756 IGKERLFTEVGRLLQKKIYVGAAKLQILKHLELPQEIMPWLTANEAESQIHVVPMWTLAS 815
Query: 632 FKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTE 691
FKRLKH+S+QYA RF LIVAF PTGW+F KGKKK+PGRRWQQGTIIRYEVPYSEH SFTE
Sbjct: 816 FKRLKHLSSQYADRFDLIVAFCPTGWSFGKGKKKTPGRRWQQGTIIRYEVPYSEHSSFTE 875
Query: 692 LKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
L+EFV+F+SPEHIIPSVNNDG +SA+AM++ LLN
Sbjct: 876 LREFVRFISPEHIIPSVNNDGPESADAMLAQLLN 909
>gi|302822859|ref|XP_002993085.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
gi|300139085|gb|EFJ05833.1| hypothetical protein SELMODRAFT_449005 [Selaginella moellendorffii]
Length = 795
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/583 (51%), Positives = 387/583 (66%), Gaps = 28/583 (4%)
Query: 147 AVLDVLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAHTNNCLDK----CENQA 202
A VL + + ++ N ++ +V CP+C +I+ ++ + R+ H+N CLD+ C+N
Sbjct: 123 AASSVLQNISNSGKIHENGLNAAVFCPICSSEITSMSIQQRENHSNLCLDQKSQHCQNDV 182
Query: 203 QDVVFPKHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDT 262
V ++ + ++ + VDV+PVV FL L L++Y F++EEIDWDT
Sbjct: 183 PSAVECLEQKSQHCQNDVPSAVEEDQNLPVDVAPVVRFLEKLNLSKYVSLFIKEEIDWDT 242
Query: 263 LQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVE-SNKDAHVSNDGSSSYHGSER 321
L WLTEEDL +G+ A GPRKKI+ L E+K +S V D H ND
Sbjct: 243 LHWLTEEDLRSLGIDAFGPRKKIVSALREMKTPFSTEVPVPENDTHKKNDN--------- 293
Query: 322 HKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAK 381
E + ++ S K K ITDFF T + P +G+ + + RKK
Sbjct: 294 --EEDEALLPQSGK----KYITDFF--GATGGTGGTKPASGRKRNGDASLSKTRKK---- 341
Query: 382 DQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIY 441
S K + W +PGT FRVDAFK+ +CSHWFLTHFH DHYQGLT+SF GKIY
Sbjct: 342 -PSNLFKAAEARQWMKIPGTTFRVDAFKHTTTECSHWFLTHFHSDHYQGLTKSFRFGKIY 400
Query: 442 CSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAV 501
CS+ITARLVN++IGI WDRL L LN++T I G+ VT L+ANHCPG+ +ILFE +GK V
Sbjct: 401 CSMITARLVNLRIGITWDRLHPLNLNERTKIDGVWVTLLDANHCPGAAMILFETHDGKFV 460
Query: 502 LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNP 561
LHTGDFRF ++MA + + C + L+LDTTYC+P YDFPKQE VIQFVI+AIQAESFNP
Sbjct: 461 LHTGDFRFCDDMARIMDILPCRLSALVLDTTYCDPQYDFPKQETVIQFVIDAIQAESFNP 520
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
TLFLIG+Y++GKERLFLEVARVLRKKIYV A K R+L CLD S ED+ W TT+E ES I
Sbjct: 521 STLFLIGTYSLGKERLFLEVARVLRKKIYVGAVKRRMLGCLDLSDEDMDWITTSECESSI 580
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP-GRRWQQGTIIRYE 680
HV+P+W++ASFKR+ +S Y G+++ IV+FSPTGW+FSKGK+ + G+RWQQGTIIRYE
Sbjct: 581 HVVPLWSIASFKRMASISRHYHGKYTTIVSFSPTGWSFSKGKRGTGNGKRWQQGTIIRYE 640
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
VPYSEH SFTELK FVK +SP IIPSVNN +A +MV +
Sbjct: 641 VPYSEHSSFTELKTFVKLLSPVEIIPSVNNSSIQAAKSMVGAM 683
>gi|302787062|ref|XP_002975301.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
gi|300156875|gb|EFJ23502.1| hypothetical protein SELMODRAFT_415475 [Selaginella moellendorffii]
Length = 769
Score = 583 bits (1502), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/576 (51%), Positives = 386/576 (67%), Gaps = 28/576 (4%)
Query: 151 VLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAHTNNCLDK----CENQAQDVV 206
VL + + ++ N ++ +V CP+C +I+ ++ + R+ H+N CLD+ C+N V
Sbjct: 101 VLQNISNSGKIHENGLNAAVFCPICSSEITSMSIQQREDHSNLCLDQKSQHCQNDVPSAV 160
Query: 207 FPKHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWL 266
++ + ++ + VDV+PVV FL L L++Y F++EEIDWDTL WL
Sbjct: 161 ECLDKKSQHCQNDVPSAVEEDQNLPVDVAPVVRFLEKLNLSKYASLFIKEEIDWDTLHWL 220
Query: 267 TEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVE-SNKDAHVSNDGSSSYHGSERHKEA 325
TEEDL +G+ A GPRKKI+ L E+K +S V D H +ND E
Sbjct: 221 TEEDLRSLGIDAFGPRKKIVSALREMKTPFSTEVPVPENDTHKTNDN-----------EE 269
Query: 326 SKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSK 385
+ ++ S K K ITDFF T + P +G+ + + RKK S
Sbjct: 270 DEALLPQSGK----KYITDFF--GATGGTGGTKPASGRKRNGDASLSKTRKK-----PSN 318
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
K + W +PGT FRVDAFK+ +CSHWFLTHFH DHYQGLT+SF GKIYCS+I
Sbjct: 319 LFKAAEARQWMKIPGTTFRVDAFKHTTTECSHWFLTHFHSDHYQGLTKSFRFGKIYCSMI 378
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
TARLVN++IGI WDRL L N++T I G+ VT L+ANHCPG+ +ILFE +GK VLHTG
Sbjct: 379 TARLVNLRIGITWDRLHPLNFNERTKIDGVWVTLLDANHCPGAAMILFETHDGKFVLHTG 438
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
DFRF ++MA + + C + TL+LDTTYC+P YDFPKQE VIQFVI+AIQAESFNP TLF
Sbjct: 439 DFRFCDDMARIMDILPCRLSTLVLDTTYCDPQYDFPKQETVIQFVIDAIQAESFNPSTLF 498
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
LIG+Y++GKERLFLEVARVLRKKIYV A K R+L CLD S ED+ W TT+E ES IHV+P
Sbjct: 499 LIGTYSLGKERLFLEVARVLRKKIYVGAVKRRMLGCLDLSDEDMDWITTSECESSIHVVP 558
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP-GRRWQQGTIIRYEVPYS 684
+W++ASFKR+ +S Y G+++ IV+FSPTGW+FSKGK+ + G+RWQQGTIIRYEVPYS
Sbjct: 559 LWSIASFKRMASISRHYHGKYTTIVSFSPTGWSFSKGKRGTGNGKRWQQGTIIRYEVPYS 618
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV 720
EH SFTELK FVK +SP IIPSVNN +A +MV
Sbjct: 619 EHSSFTELKTFVKLLSPVEIIPSVNNSSIQAAKSMV 654
>gi|168035028|ref|XP_001770013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678734|gb|EDQ65189.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 530
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 292/574 (50%), Positives = 389/574 (67%), Gaps = 61/574 (10%)
Query: 166 IDESVRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLG 225
++ ++ CP+C I I L+ R+ HTN CLDKC K E + + +G
Sbjct: 1 MNLNLECPVCQICIGGLSTAQREEHTNACLDKC----------KEEELGEVSEFAEAAMG 50
Query: 226 RSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKI 285
++ + D++PVV +L +L LA+Y + FV+EEIDWDTL+WLTEEDL +G++ALGPR+KI
Sbjct: 51 QAAGRP-DMAPVVTWLTNLNLAKYVDIFVKEEIDWDTLKWLTEEDLNSLGISALGPRRKI 109
Query: 286 LHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDF 345
L + E++ N S+S H + KE K+ S+ P
Sbjct: 110 LSAINELR----------------NVPSTSQHMTAI-KEGQKL--SDSALP--------- 141
Query: 346 FLGSITNVKKVSTPTNGQ-SGSRKSFSGSD----------RKKHAAKDQSKGRKHKDIPT 394
++V P N +G + S + S R+ +A S+ IPT
Sbjct: 142 --------RRVPAPDNHTLAGPKASGNASTTEMPWRNTNPRRAISAVRNSRAIGTSGIPT 193
Query: 395 WCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
W C+PGT FRVDAFK+ G+CS+WFLTHFH DHYQGLTR F HGKI+CS ITARL++++I
Sbjct: 194 WMCIPGTSFRVDAFKHTTGNCSNWFLTHFHTDHYQGLTRGFRHGKIFCSSITARLISLRI 253
Query: 455 GIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA 514
G+P DR+Q LPLN+ I G+ VT ++ANHCPGS++ILFEP NG+ VLHTGDFR+ +MA
Sbjct: 254 GVPLDRIQALPLNETVLIDGVRVTFIDANHCPGSVMILFEPPNGEVVLHTGDFRYYSDMA 313
Query: 515 SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
S VL+ C I TLILDTTYC+P +DFPKQ++VIQFVI+AIQAE+FNPKTLFLIG+YTIGK
Sbjct: 314 SNDVLRKCRITTLILDTTYCDPQHDFPKQDSVIQFVIDAIQAEAFNPKTLFLIGTYTIGK 373
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
E+LFLEV + L+K +YV +AK R+L C+D ++ED +W TT + ESHIHV+P+W++ASFKR
Sbjct: 374 EKLFLEVGKALQKYVYVGSAKQRLLDCMDLTEEDKRWLTTKDQESHIHVVPLWSVASFKR 433
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SPGRRWQQGTIIRYEVPYSEHCSFTE 691
+ +S Y GR+ IVAFSPTG +F K KK+ PGRR+QQG+IIRYEVPYSEH SFTE
Sbjct: 434 MGSISRHYHGRYDSIVAFSPTGCSFGKDKKRVQGRPGRRYQQGSIIRYEVPYSEHSSFTE 493
Query: 692 LKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLLN 725
LKEFV+F+ E+IIPSV + +A+AMV+ LLN
Sbjct: 494 LKEFVRFIGSENIIPSVISSTGPTADAMVATLLN 527
>gi|414589580|tpg|DAA40151.1| TPA: hypothetical protein ZEAMMB73_008326 [Zea mays]
Length = 1174
Score = 499 bits (1285), Expect = e-138, Method: Compositional matrix adjust.
Identities = 233/314 (74%), Positives = 269/314 (85%), Gaps = 4/314 (1%)
Query: 416 SHWFLTHFH---MDH-YQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTT 471
S W L H + H YQGLTRSF HGKIYCS ITA LV+ KIGIPWDRL VL LN+K
Sbjct: 860 SLWDLATTHNSILGHDYQGLTRSFCHGKIYCSSITASLVHHKIGIPWDRLHVLTLNEKLN 919
Query: 472 IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDT 531
IAG+++ C +ANHCPGSIIILFEP NGKAVLHTGDFRFS +MA+ VLQ+ +HTLILDT
Sbjct: 920 IAGVNLICFDANHCPGSIIILFEPPNGKAVLHTGDFRFSSKMANNPVLQSSCVHTLILDT 979
Query: 532 TYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
TYCNP YDFP QE VIQFVIEAIQAE+FNPKTLFLIGSYTIGKERLF+EVAR+L+KK+YV
Sbjct: 980 TYCNPRYDFPSQEIVIQFVIEAIQAEAFNPKTLFLIGSYTIGKERLFMEVARLLQKKVYV 1039
Query: 592 NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA 651
AAK ++LK L+ +E + WFT NE ESHIHV+PMWTLASFKR+K++SNQYAGR+ LIVA
Sbjct: 1040 GAAKLQILKHLELPQEIMHWFTANEAESHIHVVPMWTLASFKRMKYLSNQYAGRYDLIVA 1099
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
F PTGW F KG+KK+PG+RWQQG+IIRYEVPYSEH SFTEL++FVKF+SPEHIIPSVNND
Sbjct: 1100 FCPTGWAFGKGRKKTPGKRWQQGSIIRYEVPYSEHSSFTELQQFVKFISPEHIIPSVNND 1159
Query: 712 GRDSANAMVSLLLN 725
G +SANAM++ LLN
Sbjct: 1160 GPESANAMLAQLLN 1173
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 164/278 (58%), Gaps = 42/278 (15%)
Query: 167 DESVRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGL-- 224
D +CPLCG DISDL+EELRQ HTNNCLD+ VV R L P + +GL
Sbjct: 414 DYEAKCPLCGSDISDLSEELRQLHTNNCLDEPAKGKHGVVV----RAVSLVPSV-VGLKQ 468
Query: 225 -----GR-----------SPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTE 268
GR S + V+ VVE+L +LGL++YEE F+REE+DW+TLQWLTE
Sbjct: 469 SLRICGRKESSPNHKKEPSVGQNVETGRVVEWLRNLGLSKYEEVFIREEVDWETLQWLTE 528
Query: 269 EDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKV 328
EDL+GIG+++LGPRKKI+H L E+ K++ E V N G++ + +K+
Sbjct: 529 EDLLGIGISSLGPRKKIIHALGELLKKHDDPSEMEA---VLNSGNT---------KKTKL 576
Query: 329 IVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRK 388
++G NKLIT++F S + ++ + + S K + KG K
Sbjct: 577 PMNG------NKLITEYFQCSSFDQRQRRVCKANKPSNLNEKKISSAKVPTRRTAGKG-K 629
Query: 389 HKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMD 426
KD P WCC+PGTPFRVDAF+YLRGDCSHWFLTHFH+D
Sbjct: 630 IKDTPLWCCIPGTPFRVDAFRYLRGDCSHWFLTHFHVD 667
>gi|384251897|gb|EIE25374.1| DRMBL-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 363
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/342 (49%), Positives = 229/342 (66%), Gaps = 18/342 (5%)
Query: 392 IPTWCCVPGTPFRVDAFK--YLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+P W +PG PF VD F + C WFLTHFH DHY+GLT F G IYC+LITA+L
Sbjct: 26 LPPWQKMPGLPFLVDRFGKGTEKAACKSWFLTHFHSDHYKGLTSKFKAGVIYCTLITAKL 85
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V+ ++ +PW+RL+V+ LN + G+ VT ++ANHCPG+ +I+FEP ++HTGD R+
Sbjct: 86 VHQRLKVPWERLRVVQLNAAQLVEGVRVTFVDANHCPGAAMIVFEPPGRAPIVHTGDCRY 145
Query: 510 ----SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
+E A ++V TLILDTTYC Y+FP Q V+QFV+EA++AE+FNP TLF
Sbjct: 146 HVGMQQERALVAVRGRA---TLILDTTYCAAQYNFPPQLQVLQFVLEAVRAEAFNPATLF 202
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
L GSYTIGKERLFLEVAR+L++K+YV+ +K VL L E TT++ + +H +P
Sbjct: 203 LFGSYTIGKERLFLEVARILQRKVYVSVSKRAVLDTLGLPPEYETLLTTDD-RARLHAVP 261
Query: 626 MWTLASFKRLKHMSN---QYAGRFSLIVAFSPTGWTFSKGKKKSP-GRRWQQGTIIRYEV 681
+W ++ LKHM+ Y GR++ IV F PTGW+ GK ++P GRR Q+GT+I Y V
Sbjct: 262 LWRVS----LKHMARTLKHYRGRYTTIVGFQPTGWSMHSGKGRAPRGRRRQKGTLIVYSV 317
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
PYSEH S EL++ V F+ P IIPSVNNDG A+ MV+ L
Sbjct: 318 PYSEHSSHQELRQMVDFLRPTKIIPSVNNDGGSKASHMVASL 359
>gi|307107345|gb|EFN55588.1| hypothetical protein CHLNCDRAFT_134115 [Chlorella variabilis]
Length = 886
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 169/335 (50%), Positives = 223/335 (66%), Gaps = 7/335 (2%)
Query: 395 WCCVPGTPFRVDAFKYL--RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
W VPGT F VD F L + HWFLTHFH DHY+GLT F G +YCS TA LV
Sbjct: 548 WQLVPGTSFVVDRFSNLPQQSPHRHWFLTHFHADHYKGLTGRFDRGTLYCSPPTALLVQQ 607
Query: 453 KIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
++ + ++ +PLN + G+ VT L+ANHCPG+++ILFEP + VLHTGD R E
Sbjct: 608 QLRVKPACIRCVPLNSPILVEGVRVTFLDANHCPGAVMILFEPPGCRPVLHTGDCRLIPE 667
Query: 513 MASMSVLQTCPIHT-LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
M + L +ILDTTYC+P Y FP Q+ V++F I+A++AE+FNPKTLFL GSYT
Sbjct: 668 MQHEAALAAVRGQADIILDTTYCSPEYAFPSQQEVLRFAIDAVKAEAFNPKTLFLFGSYT 727
Query: 572 IGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLAS 631
IGKERLFLE ARVL+++IYV+AAK +VL CL+ +E TT++H +++H +P+W + S
Sbjct: 728 IGKERLFLEAARVLQRRIYVSAAKRKVLDCLELPQEYASLLTTDDHTTNLHAVPLW-MVS 786
Query: 632 FKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
K + + Y GRFS V F PTGWT + + + GRR Q+GTII Y+VPYSEH SF
Sbjct: 787 QKHMAKLLKHYRGRFSTAVGFQPTGWTHQRDASQAGARGRRRQKGTIITYQVPYSEHSSF 846
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRD-SANAMVSLL 723
+EL++FV + P IIPSVN+DG A +V LL
Sbjct: 847 SELRQFVDWFRPVSIIPSVNSDGGGPKAMRLVQLL 881
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKI 285
+ FL GLA+Y E F R L LT+ DL +G+ ALG RKK+
Sbjct: 318 LAAFLDQHGLAKYCELFERAGASLSLLPCLTDRDLQQMGIAALGARKKV 366
>gi|452821333|gb|EME28365.1| DNA ligase [Galdieria sulphuraria]
Length = 574
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 202/541 (37%), Positives = 289/541 (53%), Gaps = 74/541 (13%)
Query: 233 DVSPVVE-------FLHSLGLARYEEAFVREEID-WDTLQWLTEEDLIGIGVTALGPRKK 284
D +P+VE +L SL L YE+ V ID TL+ L EE L IGV LG RKK
Sbjct: 59 DANPIVEERLFLRAWLLSLQLEYYEDILVAHGIDSLATLKTLDEETLKTIGVHTLGARKK 118
Query: 285 ILHTL--CEIKKEYS----------RAVESNKDAHVSNDGSSSY---HGSERHKEASKVI 329
I+ L CE ++ ++ + D V D ++ H S+ K S +
Sbjct: 119 IIQNLSDCEFPPTFATDGGNTCLSLASLHLSSDKSVCKDDPNNALPSHESQSLKNKSPMS 178
Query: 330 VDGSSKPA-ANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRK 388
+P+ A + + F + NV + T S D+K SKG
Sbjct: 179 SRAPKEPSGAERKLYPIFYANHNNVNMIETA-----------SVQDKK-------SKGH- 219
Query: 389 HKDIPTWCCVPGTPFRVDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
P VPGT F VD+FK +GDC +FL+HFH DH GLT F G I+CS ITA
Sbjct: 220 ----PFSKRVPGTSFTVDSFKMAGQGDCRQFFLSHFHSDHTMGLTSRFQAGVIFCSRITA 275
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI----------AGIDVTCLEANHCPGSIIILFEP-Q 496
L+ ++G+ + + VL LNQ + G VT L+ANHCPGS++ LF Q
Sbjct: 276 SLIRSQLGVKDEYICVLELNQSCYVQDEGKSTRGTMGATVTVLDANHCPGSVMFLFFVWQ 335
Query: 497 NGKAVLHTGDFRFSEEMASM--SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI 554
+ +LHTGDFR+S E+ S + + L LDTTYCNP YDFP Q+ ++ V+EA+
Sbjct: 336 TKELILHTGDFRYSIELHSQIPQMFGKSCLDYLFLDTTYCNPRYDFPSQQEAVEAVLEAV 395
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+AESF+ + LFL G+Y IGKE++FL VA L +K+YV+ K+R+L L + TT
Sbjct: 396 KAESFHSRVLFLFGTYQIGKEKVFLHVAERLNEKVYVDKRKYRILNHLSLPENVQNLLTT 455
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK-------SP 667
S +HV+ M T+ SF ++ ++ YA R++ VAF PTGW+++ GKK P
Sbjct: 456 EPSASRLHVVDMRTV-SFGGMREIAKNYATRYNTFVAFRPTGWSYT-GKKMLRSYGNLKP 513
Query: 668 G---RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLL 724
G R+ +Q ++ Y VPYSEH SF+EL+EFV P+++IP+V + ++ A+ LLL
Sbjct: 514 GILTRQLKQNCVL-YGVPYSEHSSFSELREFVSICRPKNLIPTVCKNSKEEADRQRKLLL 572
Query: 725 N 725
+
Sbjct: 573 D 573
>gi|303284621|ref|XP_003061601.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456931|gb|EEH54231.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 698
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 199/569 (34%), Positives = 291/569 (51%), Gaps = 37/569 (6%)
Query: 172 CPLCGIDISDLNEE--LRQAHTNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLGRSPQ 229
CP+C + L + R AH N CLD E + E R + LG
Sbjct: 132 CPVCDRALRSLADTPLARVAHVNACLDD-ETGGWEGDEDDEEEVAR---DDALGATWDEG 187
Query: 230 KAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTL 289
+ V + H++ + V ++ +D L+ LT+EDL +GV LG RK+ L
Sbjct: 188 GEGEWHDVAAWCHAVDQPSFAPVAVERKLTFDALERLTDEDLRAMGVGTLGARKR-LRAA 246
Query: 290 CEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGS 349
E ++ + + G+ +H + + V + A S
Sbjct: 247 IEAREV---SPPPPPPTTTTTTGAGGWHPTREAVAVAPVFAFARGEAVAPSAAP---SSS 300
Query: 350 ITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAF- 408
+ + V P + + R S S AA+D P W VPGT F VD F
Sbjct: 301 SGSGRHVDAPPSKRRKDRPRPSSSRYVPAAAQDLPP------PPPWIRVPGTTFIVDGFR 354
Query: 409 ---KYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK--IYCSLITARLVNMKIGIPWDRLQV 463
K G C +WFLTHFH DHY GLTRS ++CS TARL +++GI RL+
Sbjct: 355 GYGKSHSGWCKNWFLTHFHADHYAGLTRSTPSEGCVVWCSRPTARLCQLRLGISKSRLRA 414
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFE--PQNGKAVLHTGDFRFSEEM----ASMS 517
+ + + + G+ + ANHCPG+++I+F+ P G VL TGD RF M +
Sbjct: 415 VDVGRDFIVEGVKCRFVHANHCPGAVMIVFDDIPGGGGPVLATGDCRFHASMTLDPGLLR 474
Query: 518 VLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERL 577
+ + P ++LDTTYC+P + FP QE V++ V A++AE+FNPK LFL G+YTIGKER+
Sbjct: 475 IQERRP--AVMLDTTYCDPKHAFPPQEEVLKAVAVAVKAENFNPKCLFLFGTYTIGKERV 532
Query: 578 FLEVARVLRKKIYVNAAKFRVLKCLD--FSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
F E A+ L KK+YV K +VL L K + TT++ E+++HV+PM + SF R+
Sbjct: 533 FFEAAKALGKKVYVGKQKRQVLDALGDAIDKTYMDSVTTDDTETNLHVVPMGS-TSFARM 591
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG-RRWQQGTIIRYEVPYSEHCSFTELKE 694
K + Y R+ ++AF PTGWTF K K + +R Q+G++I+Y +PYSEH SFTEL+
Sbjct: 592 KTILRYYKNRYDTVIAFKPTGWTFEKAAKTARATKRTQRGSLIQYALPYSEHSSFTELRA 651
Query: 695 FVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
F++++ P I+P V ND A MV LL
Sbjct: 652 FMRWLKPRAILPHVGNDRGPKAARMVRLL 680
>gi|308809045|ref|XP_003081832.1| putative SNM1 (ISS) [Ostreococcus tauri]
gi|116060299|emb|CAL55635.1| putative SNM1 (ISS), partial [Ostreococcus tauri]
Length = 374
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/352 (43%), Positives = 216/352 (61%), Gaps = 15/352 (4%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY---LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYC 442
G P W PGT F VD F++ G C WFLTHFH DH++GLT++F G IY
Sbjct: 4 GSTRTSAPCWIRPPGTRFIVDGFEWDLGRGGACETWFLTHFHADHHRGLTKTFDKGIIYG 63
Query: 443 SLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-PQNGKA- 500
+ T LV MKI +P RL+ L + + G+ VT ++ANHCPG+++ILFE P+ A
Sbjct: 64 TKETLELVRMKIQVPALRLRALEIGVPARVDGVQVTFIDANHCPGAVMILFEFPERPDAS 123
Query: 501 -VLHTGDFRFSEEMA---SMSVLQTCPIH-TLILDTTYCNPLYD-FPKQEAVIQFVIEAI 554
VLHTGDFRFS +A ++ + P LILDTTYC+ +D FP QE V+ V EA+
Sbjct: 124 PVLHTGDFRFSARLARDETLVRIAASPKRPILILDTTYCSLEHDAFPTQEYVLNAVREAL 183
Query: 555 QAESF--NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
E + LFL G+YT+GKE++F E AR L +K+YV AAK VL L ++++ +
Sbjct: 184 THEDNLDGARKLFLFGTYTVGKEKVFFEAARTLGRKVYVGAAKRSVLDALSLTRDEREAL 243
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS-PGRRW 671
T ++ +++HV+PM + SF ++ + Y RF +VAF PTGWTFS KK S R
Sbjct: 244 TRDDKRTNLHVVPMGS-TSFSKMASILKYYKSRFDTVVAFRPTGWTFSANKKTSRASSRR 302
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
Q+G +++Y +PYSEH S +EL+ F++F++P I P V NDG + N M+ LL
Sbjct: 303 QRGRLVQYGLPYSEHSSLSELRAFIRFINPRSIFPHVGNDGGEKLNDMLKLL 354
>gi|357167428|ref|XP_003581158.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Brachypodium distachyon]
Length = 512
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 220/356 (61%), Gaps = 24/356 (6%)
Query: 364 SGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLT 421
SG ++ + G + AK K P + +PGTPF VDAF+Y + G CS +FL+
Sbjct: 118 SGRKRRWGGDSEENGVAK------KPATCPFYKKIPGTPFTVDAFRYGAVEG-CSAYFLS 170
Query: 422 HFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLE 481
HFH DHY GLT+ + HG IYC+ +TARLV M + I + + L LN + I G+ VT LE
Sbjct: 171 HFHYDHYGGLTKKWCHGPIYCTALTARLVKMLLSINSEYICPLELNTEYVIDGVTVTLLE 230
Query: 482 ANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFP 541
ANHCPG+ +I F +GK LHTGDFR S+ M S +LQT I+ L LDTTYCNP Y FP
Sbjct: 231 ANHCPGAALIHFRLSDGKTYLHTGDFRASKSMQSHPLLQTGRINLLYLDTTYCNPKYKFP 290
Query: 542 KQEAVIQFVIEAIQAE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK 600
QE VI FV+ Q PKTL ++G+Y+IGKE ++L +++ L IY +A++ R+L
Sbjct: 291 PQEDVIDFVVRTAQRYLKKQPKTLIVVGAYSIGKENVYLAISQALEVPIYTDASRRRILH 350
Query: 601 CL---DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS--NQYAGRFSLIVAFSPT 655
D SK ++ + S +HVMP+ ++ K K++ NQ RF ++AF PT
Sbjct: 351 SFGWPDLSKR----ISSCDQSSPLHVMPLASVQHEKLTKYLETLNQ---RFLAVLAFRPT 403
Query: 656 GWTFSK--GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
GWTFS+ GK+ + +G + Y VPYSEH SFTEL++F+KFV P+ +IP+VN
Sbjct: 404 GWTFSEAAGKELDLIKPSSRGRVTIYGVPYSEHSSFTELRDFLKFVRPQKVIPTVN 459
>gi|153791623|ref|NP_001093331.1| uncharacterized protein LOC733261 [Xenopus laevis]
gi|148922160|gb|AAI46633.1| LOC733261 protein [Xenopus laevis]
Length = 932
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 235/397 (59%), Gaps = 12/397 (3%)
Query: 328 VIVDGSSKPAANKLITDFFLGSITNVKK-VSTPTNGQSGSRKSFSGSDRKKHAAKDQSKG 386
V + SKP K LG + +T G +G+++ G ++ +G
Sbjct: 528 VALPSESKPGQRKRKGQGSLGDKDPLADHTNTEPEGATGNQR---GGWKRPRQFSTGGEG 584
Query: 387 RKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ K P + +PGT F VDAF+Y + + CS +FLTHFH DHY GLT+ F IYCS I
Sbjct: 585 KGKKQCPFYKKIPGTGFAVDAFQYGQIEGCSAYFLTHFHSDHYGGLTKKFRF-PIYCSKI 643
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
T LV K+ + + + LP+N + + GI V LEANHCPG++++LF NG +VLHTG
Sbjct: 644 TGNLVQNKLRVESEFINTLPMNTECVVNGIRVVLLEANHCPGAVLLLFRLPNGTSVLHTG 703
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTL 564
DFR M S L +HTL LDTTYC+P Y FP Q+ IQF + A + + P+TL
Sbjct: 704 DFRADRSMESYPALIGQRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFETVTLYPRTL 763
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF-TTNEHESHIHV 623
+ G+Y++GKE++FL +A VL K+ ++ K++ ++CL+ EDI+ TT+ H + +HV
Sbjct: 764 VVCGTYSVGKEKVFLAIADVLGCKVCMSQDKYKTMQCLE--SEDIRSLVTTDWHSTALHV 821
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVP 682
+PM + +FK L ++ G++ ++AF PTGWT+S + + +G + Y +P
Sbjct: 822 LPMMQV-NFKGLNVHLGKFPGKYDRVLAFKPTGWTYSDSSVLVADIKPEIRGKVTVYGIP 880
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
YSEH S++ELK FV+++ P+ IIP+VN +S +AM
Sbjct: 881 YSEHSSYSELKRFVQWLKPQKIIPTVNVGNYNSRSAM 917
>gi|255086367|ref|XP_002509150.1| predicted protein [Micromonas sp. RCC299]
gi|226524428|gb|ACO70408.1| predicted protein [Micromonas sp. RCC299]
Length = 671
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/341 (43%), Positives = 207/341 (60%), Gaps = 13/341 (3%)
Query: 395 WCCVPGTPFRVDAFK-YLRGD----CSHWFLTHFHMDHYQGLTRSFHHGK--IYCSLITA 447
W VPGT F VD F+ Y + C HWFLTHFH DHY+GLT+S ++CS TA
Sbjct: 319 WIRVPGTRFIVDGFQGYGKSHGGWWCRHWFLTHFHADHYRGLTKSTPPPGCLVWCSRPTA 378
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
L ++GI DRL+ + + + + G+ T ++ANHCPG+++I+F+ VL TGD
Sbjct: 379 ELCASRLGIQRDRLRAVDVGRTIVVDGVRCTFIDANHCPGAVMIVFDGIPAGPVLATGDC 438
Query: 508 RFSEEMASMSVLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
R+ M + L ++LDTTYC+P + FP Q V+ V +A++AESFNP+ LF
Sbjct: 439 RYHPGMKTDPTLAALASRRPAVMLDTTYCSPAHVFPPQCEVLAAVRDAVKAESFNPRVLF 498
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI--QWFTTNEHESHIHV 623
L G+YTIGKER+F E A+ L KK+YV K +VL L + +D T ++ +++HV
Sbjct: 499 LFGTYTIGKERVFFEAAKALGKKVYVGKQKMKVLDALGSAIDDADRDMITADDQATNLHV 558
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG-RRWQQGTIIRYEVP 682
+PM + SF R+K + Y R+ IVAF PTGWTF KK + +R Q+G +I+Y VP
Sbjct: 559 VPMGS-TSFGRMKTILRYYKNRYDTIVAFKPTGWTFEAAKKHARATKRTQRGAMIQYSVP 617
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
YSEH SF EL+ FVKF+ P ++P V ND A MV LL
Sbjct: 618 YSEHSSFDELRAFVKFLKPRAVLPHVGNDRGPKARRMVQLL 658
>gi|395502101|ref|XP_003755424.1| PREDICTED: DNA cross-link repair 1A protein [Sarcophilus harrisii]
Length = 1037
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 222/353 (62%), Gaps = 14/353 (3%)
Query: 362 GQSGSRKSFSGSDRKKHAAKDQSKGR-KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHW 418
G+ GS+K RK+ K S+G K K P + +PGT F VDAF+Y + G C+ +
Sbjct: 671 GRGGSQKW-----RKRFQDKGYSEGGLKEKKCPFYKKIPGTTFTVDAFQYGAIEG-CTAY 724
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
FLTHFH DHY GL++ F +YCS IT+ LV K+ + L LP++ T+ GI V
Sbjct: 725 FLTHFHSDHYAGLSKKFTF-PVYCSKITSNLVKNKLCVQEQYLHPLPMDTVCTVNGIKVV 783
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
L+ANHCPG+++ILF NG LHTGDFR + M S+L + +HTL LDTTYC+P Y
Sbjct: 784 LLDANHCPGAVMILFYLPNGTVTLHTGDFRANPSMERYSLLASQKVHTLYLDTTYCSPEY 843
Query: 539 DFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR 597
FP Q+ VIQF I A + + +P+TL + G+Y+IGKE++FL +A VL K+ ++ K++
Sbjct: 844 TFPSQQEVIQFAINIAFETVTLSPRTLVVCGTYSIGKEKIFLAIADVLGSKVSMSQEKYK 903
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW 657
L+CL+ +E TT+ + +H++PM + +FK L++ N+Y G++ I+AF PTGW
Sbjct: 904 TLQCLEL-QEVNSLITTDWSSALVHLLPMMQI-NFKGLQNHLNKYGGKYENILAFRPTGW 961
Query: 658 TFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
T S+ Q +G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 962 THSEKFGSLADIVPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 1014
>gi|145352117|ref|XP_001420404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580638|gb|ABO98697.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 346
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 217/346 (62%), Gaps = 16/346 (4%)
Query: 393 PTWCCVPGTPFRVDAFKYL---RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
P W PGT F VD F+Y C HWFLTHFH DH++GLTR+F G +Y + T L
Sbjct: 1 PAWIRPPGTMFIVDGFEYAASSEARCEHWFLTHFHADHHRGLTRTFDRGVVYGTRTTTEL 60
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE---PQNGKAVLHTGD 506
V KIG+P +RL+V+ + G+DVT L ANHCPG+ +I FE ++ VLHTGD
Sbjct: 61 VRTKIGVPRERLRVVEFGVVVRVDGVDVTFLRANHCPGAAMICFEFPHRRDASPVLHTGD 120
Query: 507 FRFSEEMASMSVL------QTCPIHTLILDTTYCNPLY-DFPKQEAVIQFVIEAIQAES- 558
FRF + M + L + P LILDTTYC+ + DFP QE V++ V +A+ E
Sbjct: 121 FRFHDGMRNDPTLLRITSDPSAPRPILILDTTYCSLEHDDFPTQERVLKAVRDAVVHEDL 180
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
+ + LFL G+YTIGKE++FLE A+VL +K+Y+ AK V+ + E+ T ++ +
Sbjct: 181 LSTRKLFLFGTYTIGKEKVFLEAAKVLNRKVYIGKAKRSVMDAIALDPEERSAMTHDDSK 240
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG-RRWQQGTII 677
+++HV+PM + SF ++ + Y RF ++AF PTGWTFS KK + R Q+G +I
Sbjct: 241 TNLHVVPMGS-TSFMKMASILKYYKSRFDTVIAFRPTGWTFSAQKKTARATSRRQRGRLI 299
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+Y +PYSEH S EL+EFV+F++P+ I P VNNDG ++A M++LL
Sbjct: 300 QYGLPYSEHSSLNELREFVRFMNPKFIFPHVNNDGGENAKRMLTLL 345
>gi|66910826|gb|AAH97815.1| LOC733261 protein [Xenopus laevis]
Length = 526
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 155/397 (39%), Positives = 235/397 (59%), Gaps = 12/397 (3%)
Query: 328 VIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQ-SGSRKSFSGSDRKKHAAKDQSKG 386
V + SKP K GS+ + ++ TN + G+ + G ++ +G
Sbjct: 122 VALPSESKPGQRKRKGQ---GSLGDKDPLADHTNTEPEGATGNQRGGWKRPRQFSTGGEG 178
Query: 387 RKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ K P + +PGT F VDAF+Y + + CS +FLTHFH DHY GLT+ F IYCS I
Sbjct: 179 KGKKQCPFYKKIPGTGFAVDAFQYGQIEGCSAYFLTHFHSDHYGGLTKKFRF-PIYCSKI 237
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
T LV K+ + + + LP+N + + GI V LEANHCPG++++LF NG +VLHTG
Sbjct: 238 TGNLVQNKLRVESEFINTLPMNTECVVNGIRVVLLEANHCPGAVLLLFRLPNGTSVLHTG 297
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTL 564
DFR M S L +HTL LDTTYC+P Y FP Q+ IQF + A + + P TL
Sbjct: 298 DFRADRSMESYPALIGQRVHTLYLDTTYCSPEYTFPPQQETIQFAVNIAFEMVTLYPCTL 357
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ-WFTTNEHESHIHV 623
+ G+Y++GKE++FL +A VL K+ ++ K++ ++CL+ EDI+ TT+ H + +HV
Sbjct: 358 VVCGTYSVGKEKVFLAIADVLGCKVCMSQDKYKTMQCLE--SEDIRSLVTTDWHSTALHV 415
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVP 682
+PM + +FK L ++ G++ ++AF PTGWT+S + + +G + Y +P
Sbjct: 416 LPMMQV-NFKGLNVHLGKFPGKYDRVLAFKPTGWTYSDSSVLVADIKPEIRGKVTVYGIP 474
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
YSEH S++ELK FV+++ P+ IIP+VN +S +AM
Sbjct: 475 YSEHSSYSELKRFVQWLKPQKIIPTVNVGNYNSRSAM 511
>gi|260828015|ref|XP_002608959.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae]
gi|229294313|gb|EEN64969.1| hypothetical protein BRAFLDRAFT_287105 [Branchiostoma floridae]
Length = 377
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 203/358 (56%), Gaps = 6/358 (1%)
Query: 365 GSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHF 423
G ++++G + K P + +PGT F VDAF+Y C+ +FL+HF
Sbjct: 2 GRTRNWNGGATFSYPRGGSQGAPAAKQCPFYKKIPGTTFVVDAFRYGTIPGCTAYFLSHF 61
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHYQGL++ F H IY S +T LV KI + L LPLN + G+ VT LEAN
Sbjct: 62 HYDHYQGLSKHFRHA-IYSSKVTCNLVKKKIRVADRYLHPLPLNTPCDVEGVQVTLLEAN 120
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQ 543
HCPG+++ LF+ +GK +LHTGDFR M L C +HTL LDTTYCNP Y FP Q
Sbjct: 121 HCPGAVMFLFQLPDGKNLLHTGDFRADTSMECYPALTGCKVHTLYLDTTYCNPAYSFPAQ 180
Query: 544 EAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
VI F + A++A NPKTL + GSYTIGKER+F +A L K+ K L CL
Sbjct: 181 MEVIDFAVGVAVEAVQHNPKTLIVCGSYTIGKERVFFAIAEALGCKVCATRDKKNTLDCL 240
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKG 662
D S + + T N E+ +HV+PM L F LK Y ++ ++AF PTGWT +
Sbjct: 241 D-SDQVKRLVTLNGRETRLHVLPMKDL-KFNSLKSYLEGYRPQYDSVLAFEPTGWTHNNS 298
Query: 663 KKKSPG-RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
R + G I Y +PYSEH S+TE+K FV+F+ P I+P+VNN S +AM
Sbjct: 299 VSTVANIRPKRHGNITVYGIPYSEHSSYTEMKRFVQFLQPAKILPTVNNGSPKSRHAM 356
>gi|156390186|ref|XP_001635152.1| predicted protein [Nematostella vectensis]
gi|156222243|gb|EDO43089.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/336 (46%), Positives = 205/336 (61%), Gaps = 12/336 (3%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +P TPF VDAF+Y + G +FL+HFH DHY GL + F H IYCS +TA LV
Sbjct: 3 PFYKKIPDTPFVVDAFRYGSIPG-IKVYFLSHFHYDHYGGLKKGFSH-PIYCSKVTANLV 60
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
KI + ++ LP++ + + VT L+ANHCPG++++LFE NGK +LHTGDFR S
Sbjct: 61 ESKIKVSQRYIKALPMDTPVIVDKVQVTLLDANHCPGAVLLLFELPNGKTILHTGDFRAS 120
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQF-VIEAIQAESFNPKTLFLIGS 569
EM S L I TL LDTTYC+P Y FPKQE I F V +A QA S NPKTL + G+
Sbjct: 121 REMESYPALANKTIDTLYLDTTYCDPQYTFPKQEETINFAVTKAAQAVSENPKTLIVCGT 180
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL--DFSKEDIQWFTTNEHESHIHVMPMW 627
YTIGKE++FL +A+ L K+ V + K R+L L DF + I TT++ E IHV+PM
Sbjct: 181 YTIGKEKVFLAIAKELGCKVTVQSDKKRILDSLESDFIQSVI---TTDKSEGRIHVLPMG 237
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
L + + L +Q+ G+F+ +VAF PTGW G S R +G I Y VPYSEH
Sbjct: 238 KL-NHQHLSSYMDQFKGKFTRVVAFKPTGWEHKSG-PLSATRPVTKGPISIYGVPYSEHS 295
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
S+ E+K FV+F P I+P+VN S M +
Sbjct: 296 SYEEMKRFVQFTRPTKIVPTVNVHSVSSREKMTEIF 331
>gi|149634612|ref|XP_001513453.1| PREDICTED: DNA cross-link repair 1A protein [Ornithorhynchus
anatinus]
Length = 994
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 226/372 (60%), Gaps = 13/372 (3%)
Query: 352 NVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSK-GRKHKDIPTWCCVPGTPFRVDAFKY 410
N+ KVST ++GSR+ RK+ ++ G K P + +PGT F VDAF+Y
Sbjct: 619 NLTKVSTEP-ARAGSRRW-----RKRFKESTYTEEGPPKKICPFYKKIPGTGFTVDAFQY 672
Query: 411 -LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQK 469
DC+ +FLTHFH DHY GL++ F + IYC+ IT LV K+ + + +LP++
Sbjct: 673 GAIDDCTAYFLTHFHSDHYGGLSKKFTY-PIYCNKITGNLVKSKLKVQEQYIHILPMDTV 731
Query: 470 TTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLIL 529
+ GI V L+ANHCPG++++LF NG +LHTGDFR M L IH L L
Sbjct: 732 CIVNGIKVVLLDANHCPGAVMLLFYLPNGNVILHTGDFRADPSMKRYPKLIGQKIHMLYL 791
Query: 530 DTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK 588
DTTYC+P Y FP Q+ VIQF A ++ + NP TL + G+Y+IGKE++F+ +A VL K
Sbjct: 792 DTTYCSPEYSFPSQQEVIQFAANTAFESINLNPHTLVICGTYSIGKEKVFIAIAEVLGSK 851
Query: 589 IYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL 648
+ ++ K++ L+CL+ +E TT+ + +H++PM + +FK L+ +++ G+++
Sbjct: 852 VSMSQEKYKTLRCLEL-EEVNSLITTDWSSTKVHLLPMMQI-TFKGLQSHLSKFGGKYNQ 909
Query: 649 IVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
++AF PTGWT+S K S + +G I Y +PYSEH S+ E+K FV+++ P+ IIP+
Sbjct: 910 VLAFKPTGWTYSEKSSSISDIKPETRGNITIYGIPYSEHSSYLEMKHFVQWLKPQKIIPT 969
Query: 708 VNNDGRDSANAM 719
VN + NAM
Sbjct: 970 VNIGCWKTRNAM 981
>gi|56711354|ref|NP_001008683.1| DNA cross-link repair 1A protein [Gallus gallus]
gi|73620743|sp|Q5QJC4.1|DCR1A_CHICK RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A; Short=chSNM1A
gi|47156206|gb|AAR27404.1| SNM1A [Gallus gallus]
Length = 972
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 222/370 (60%), Gaps = 12/370 (3%)
Query: 348 GSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQS----KGRKHKDIPTWCCVPGTPF 403
GS+ +++ V +N G SG RK +S +G + K P + +PGT F
Sbjct: 582 GSVEDLEAVEESSNKDGGDANVTSGGQRKWRKRFRESSTTDEGARKKQCPFYKKIPGTGF 641
Query: 404 RVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL 461
VDAF+Y + G C+ +FLTHFH DHY GLT++F +YC+ IT LV K+ + +
Sbjct: 642 TVDAFQYGEIEG-CTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSKLRVKEQYI 699
Query: 462 QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
VLP++ + + GI V L+ANHCPG+ +ILF +G A+LHTGDFR M L
Sbjct: 700 NVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPSGTAILHTGDFRADPSMERYPALIG 759
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLE 580
IHTL LDTTYC+P Y FP Q+ VIQF + A + + NP+TL + G+Y+IGKE++FL
Sbjct: 760 QKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYSIGKEKVFLA 819
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
+A VL K ++ K++ L+CL+ + + T N + +H++PM + +FK L+ N
Sbjct: 820 IAEVLGSKASMSRDKYKTLQCLESAAVN-SLITMNWDGTLLHILPMMQI-NFKGLQDHLN 877
Query: 641 QYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFVKFV 699
+++ F ++AF PTGWT+S + Q +G I Y +PYSEH S+ E+K FV+++
Sbjct: 878 KFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQTRGNITIYGIPYSEHSSYLEMKRFVQWL 937
Query: 700 SPEHIIPSVN 709
P+ IIP+VN
Sbjct: 938 KPQKIIPTVN 947
>gi|242075620|ref|XP_002447746.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
gi|241938929|gb|EES12074.1| hypothetical protein SORBIDRAFT_06g014970 [Sorghum bicolor]
Length = 496
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 148/349 (42%), Positives = 216/349 (61%), Gaps = 6/349 (1%)
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTR 433
R+ +++ +K P + +PGTPF VDAF+Y + + CS +FL+HFH DHY GLT+
Sbjct: 139 RRGSTEEERVAPKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHFHHDHYGGLTK 198
Query: 434 SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF 493
+ HG IYCS +TARLV M + + D + L L+ I G+ VT LEANHCPG+ +I F
Sbjct: 199 KWCHGPIYCSALTARLVKMCLSVNSDYIYPLELDTNYVIEGVTVTLLEANHCPGAALIHF 258
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEA 553
+ +GK LHTGDFR S+ M +LQ ++ + LDTTYCNP Y FP QE VI FV+
Sbjct: 259 QLSDGKTYLHTGDFRASKSMQLHPLLQRGRVNLVYLDTTYCNPKYKFPPQEDVIDFVVRT 318
Query: 554 IQAE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
Q PKTL ++G+Y+IGKE ++L +++ L IY +A++ R+L +S +
Sbjct: 319 AQRYLKKQPKTLIVVGAYSIGKENVYLAISQALEVPIYTDASRRRILHSFGWSDLSKRIC 378
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRR 670
+ N+ S +HV+P+ ++ + + LK +GRF ++AF PTGWTFS+ GK +
Sbjct: 379 SCNQ-SSPLHVLPLGSV-NHENLKKYLETLSGRFLAVLAFRPTGWTFSEATGKHLDLIKP 436
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
G++ Y VPYSEH SFTEL++FV F+ P+ +IP+VN S + M
Sbjct: 437 SCNGSVTIYGVPYSEHSSFTELRDFVMFLRPQKVIPTVNVGNATSRDKM 485
>gi|413918214|gb|AFW58146.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
gi|413918215|gb|AFW58147.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 505
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/349 (42%), Positives = 213/349 (61%), Gaps = 6/349 (1%)
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTR 433
R+ +++ +K P + +PGTPF VDAF+Y + + CS +FL+HFH DHY GLT+
Sbjct: 148 RRGSTEEERVAAKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHFHHDHYGGLTK 207
Query: 434 SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF 493
+ HG IYCS +TARLV M + + D + L L+ + I G+ VT LEANHCPG+ +I F
Sbjct: 208 KWCHGPIYCSALTARLVKMCLSVNSDYICPLELDTEYVIEGVTVTLLEANHCPGAALIHF 267
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEA 553
+GK LHTGDFR S+ M S +LQ ++ + LDTTYCNP Y FP QE VI FV+
Sbjct: 268 RLSDGKTCLHTGDFRASKTMQSHPLLQRGRVNLVYLDTTYCNPKYKFPPQEDVIDFVVRT 327
Query: 554 IQAE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
+ PKTL ++G+Y+IGKE ++L +++ L IY +A++ R+L + +
Sbjct: 328 TRRYLKKQPKTLIVVGAYSIGKENVYLAISQALEAHIYTDASRRRILYSFGWPDLSKRLC 387
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRR 670
+ N+ S +HV+P+ ++ + + LK GRF ++AF PTGWTFS+ GK +
Sbjct: 388 SCNQ-SSSLHVLPLGSI-NHENLKKYLETLNGRFLAVLAFRPTGWTFSEATGKHLDLIKP 445
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ Y VPYSEH SFTEL++FV F+ P+ IIP+VN S + M
Sbjct: 446 SSNANVTIYGVPYSEHSSFTELRDFVMFLKPQKIIPTVNVGNATSRDKM 494
>gi|380818542|gb|AFE81144.1| DNA cross-link repair 1A protein [Macaca mulatta]
Length = 1039
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 251/462 (54%), Gaps = 14/462 (3%)
Query: 264 QWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHK 323
+ L E L GI + + K + C+ K E S + ++++ S SER +
Sbjct: 573 KLLGESALEGINLNPVPSPNKKRSSQCKRKAEKSLSDLEFDASNLNESQLSVELSSERSQ 632
Query: 324 EASKVIVDGSSKPAANKLITDFFLGS---ITNVKKVSTPTNGQSGSRKSFSGSDRKKHAA 380
K S + + +D + + N+ KV T G + KK
Sbjct: 633 RQKKRRKKNSLQEGVYQKRSDHLINTESEAVNLSKVKVFTKSAHGGLQR----GNKKIPE 688
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F
Sbjct: 689 SSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-P 747
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGK 499
+YCS IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG
Sbjct: 748 VYCSEITGNLLKNKLHVQEQYIHTLPLDTECVVNGVKVVLLDANHCPGAVMILFYLPNGT 807
Query: 500 AVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAES 558
+LHTGDFR M S+L +H L LDTTYC+P Y FP Q+ VIQF I A +A +
Sbjct: 808 VILHTGDFRADPSM-EHSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALT 866
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
NP TL + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+
Sbjct: 867 LNPHTLVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIP-EINSLITTDMCS 925
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTII 677
S +H++PM + +FK L++ +Y G+++ I+AF PTGWT S K + + +G I
Sbjct: 926 SLVHLLPMMQI-NFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVIPQTKGNIS 984
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
Y +PYSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 985 IYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRNTM 1026
>gi|327277472|ref|XP_003223488.1| PREDICTED: DNA cross-link repair 1A protein-like [Anolis
carolinensis]
Length = 967
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/370 (41%), Positives = 221/370 (59%), Gaps = 21/370 (5%)
Query: 357 STPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGD 414
+T GQ RK F K + D+ +G + K P + +PGT F VDAF+Y + G
Sbjct: 597 NTTPGGQRRWRKKF------KESCPDE-EGTRKKQCPFYKKIPGTSFVVDAFQYGEIEG- 648
Query: 415 CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG 474
C +FLTHFH DHY GLT+ F IYC+ IT LV K+ + + + +LP+N + I G
Sbjct: 649 CKGYFLTHFHSDHYGGLTKKFTF-PIYCNKITGNLVKSKLRVLEEYIHILPMNTECIIDG 707
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
I V L+ANHCPG+ +ILF NG A+LHTGDFR M L I+TL LDTTYC
Sbjct: 708 IKVVLLDANHCPGAAMILFAFPNGTAILHTGDFRAHPSMERYPFLIGRKINTLYLDTTYC 767
Query: 535 NPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNA 593
+P Y FP Q+ +IQF A + + NP+TL + G+Y+IGKE++FL +A VL K+ ++
Sbjct: 768 SPEYTFPSQQEMIQFAANTAFEIVTLNPRTLVVCGTYSIGKEKVFLAIANVLGSKVSMSQ 827
Query: 594 AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
K++ L+CL+ S E T + + + +H++PM + +FK L++ ++++ +F I+AF
Sbjct: 828 EKYKTLQCLE-STEINSLITLDWNNTLLHLLPMMQI-NFKGLQNHLSKFSAKFDQILAFK 885
Query: 654 PTGWTFSKG----KKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
PTGWT+S P R G I Y +PYSEH SF E+K FV+++ P+ IIP+VN
Sbjct: 886 PTGWTYSDQCYSLNDIQPQTR---GNITIYGIPYSEHSSFVEMKRFVQWLKPQKIIPTVN 942
Query: 710 NDGRDSANAM 719
+ N M
Sbjct: 943 VGNWKTRNEM 952
>gi|410896302|ref|XP_003961638.1| PREDICTED: DNA cross-link repair 1A protein-like [Takifugu
rubripes]
Length = 894
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 205/330 (62%), Gaps = 6/330 (1%)
Query: 393 PTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + +PGT F +DAF+Y + + +FLTHFH DHY GLT+S +YC+ IT LV
Sbjct: 553 PFYKKIPGTKFAIDAFRYGMIEGITAYFLTHFHSDHYGGLTKSSTF-PVYCNKITGNLVK 611
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
K+ + + VLP+N + T+ G+ V LEANHCPG+ ++LF +G+ VLHTGDFR
Sbjct: 612 SKLKVAEPYIHVLPMNTQVTVEGVTVVLLEANHCPGAAMLLFFLPDGQIVLHTGDFRADP 671
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSY 570
M L +C + TL LDTTYC+P Y FP Q+ VI F A + + NP+TL + GSY
Sbjct: 672 SMELYPELLSCRVQTLYLDTTYCSPEYTFPTQQEVINFAASTAFELVALNPRTLVVCGSY 731
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
++GKE++F +A VL K+ ++ K+ + CL+ S++ Q TT+ + +HV+PM L
Sbjct: 732 SVGKEKVFFALADVLGSKVSLSRDKYNTMCCLE-SEQVKQCITTDWKAARVHVLPMMQL- 789
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSF 689
+FK+L+ +++ ++ +VAF PTGWTFS+ + G G I Y +PYSEH SF
Sbjct: 790 TFKKLEQHLARFSSQYDQLVAFKPTGWTFSQQVESVGGIEPDVSGNISIYGIPYSEHSSF 849
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
E+K FV+++ P IIP+VNN +S AM
Sbjct: 850 VEMKRFVQWLQPLKIIPTVNNGSWESRRAM 879
>gi|317419410|emb|CBN81447.1| DNA cross-link repair 1A protein [Dicentrarchus labrax]
Length = 943
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/331 (42%), Positives = 207/331 (62%), Gaps = 8/331 (2%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PGT F +DAF Y + G + +FLTHFH DHY GLT++ IYC+ IT LV
Sbjct: 602 PFYKKIPGTKFVIDAFHYGEIEG-ITAYFLTHFHSDHYGGLTKN-STLPIYCNRITGNLV 659
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
K+ + + +LP+N + T+ G+ V LEANHCPG+ ++LF +G+ VLHTGDFR
Sbjct: 660 KTKLKVAEQYIHILPMNTEVTVEGVTVILLEANHCPGAAMLLFFLPDGQTVLHTGDFRAD 719
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGS 569
M + L +C + TL LDTTYC+P Y FP+Q+ VI F A + + NP+TL + GS
Sbjct: 720 PSMETYPELVSCRVQTLYLDTTYCSPEYTFPRQQEVINFAASTAFELVTLNPRTLVVCGS 779
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
Y++GKE++FL +A VL K+ ++ K+ + CL+ S+ Q TT+ + +HV+PM L
Sbjct: 780 YSVGKEKVFLALAEVLGTKVCLSRDKYNTMCCLE-SEHVKQRITTDWKAAQVHVLPMMQL 838
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCS 688
SFK+L+ +++ ++ +VAF PTGWTFS+ + + Q G I Y +PYSEH S
Sbjct: 839 -SFKKLQDYLARFSRQYDQLVAFKPTGWTFSQQVESVEDIQPQISGNISIYGIPYSEHSS 897
Query: 689 FTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
F E+K FV+++ P IIP+VNN S AM
Sbjct: 898 FLEMKRFVQWLQPLKIIPTVNNGSWASRKAM 928
>gi|355562792|gb|EHH19386.1| hypothetical protein EGK_20079 [Macaca mulatta]
gi|355783112|gb|EHH65033.1| hypothetical protein EGM_18373 [Macaca fascicularis]
Length = 1039
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 209/337 (62%), Gaps = 7/337 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 694 GSRKKTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 752
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 753 ITGNLLKNKLHVQEQYIHTLPLDIECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 812
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VIQF I A +A + NP T
Sbjct: 813 GDFRADPSM-EHSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHT 871
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 872 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIP-EINSLITTDMCSSLVHL 930
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L++ +Y G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 931 LPMMQI-NFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVIPQTKGNISIYGIP 989
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
YSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 990 YSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRNTM 1026
>gi|109090605|ref|XP_001090942.1| PREDICTED: DNA cross-link repair 1A protein [Macaca mulatta]
Length = 1039
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 209/337 (62%), Gaps = 7/337 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 694 GSRKKTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 752
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 753 ITGNLLKNKLHVQEQYIHTLPLDIECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 812
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VIQF I A +A + NP T
Sbjct: 813 GDFRADPSM-EHSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHT 871
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 872 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCLNIP-EINSLITTDMCSSLVHL 930
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L++ +Y G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 931 LPMMQI-NFKGLQNHLKKYGGKYNQILAFRPTGWTHSNKFPRIADVIPQTKGNISIYGIP 989
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
YSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 990 YSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRNTM 1026
>gi|324021704|ref|NP_001018385.3| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Danio
rerio]
Length = 926
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/365 (40%), Positives = 214/365 (58%), Gaps = 9/365 (2%)
Query: 358 TPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCS 416
T T G+ G R G R ++ K P + +PGT F VDAF+Y + +
Sbjct: 538 TQTEGKRGGRAE--GRKRWNRGKATDGDPKEPKRCPFYKKIPGTGFAVDAFQYGVVEGVT 595
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID 476
+FLTHFH DHY GL + IYC+ +T+ LV K+ + + VLP+N + + G+
Sbjct: 596 AYFLTHFHSDHYGGLKKD-SAVPIYCNKVTSNLVKSKLKVDEQYIHVLPMNTECIVQGVK 654
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP 536
VT L+ANHCPG++++LF +G+ VLHTGDFR M LQ I TL LDTTYC+P
Sbjct: 655 VTLLDANHCPGAVMLLFVLPDGQTVLHTGDFRADPSMERYPELQGLRIQTLYLDTTYCSP 714
Query: 537 LYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK 595
Y FP Q+ V+ F + A + + NP+TL + G+Y++GKE++FL V+ VL K+ ++ K
Sbjct: 715 EYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCGTYSVGKEKVFLAVSEVLSSKVCLSKDK 774
Query: 596 FRVLKCLDFSKEDI-QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSP 654
+ + CL+ EDI Q TTN + +HV+PM + +FK L+ +++ ++ +VAF P
Sbjct: 775 YNTMCCLE--SEDIGQRITTNWQSAQVHVLPMMQI-NFKNLQTHLKKFSKKYDQLVAFKP 831
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
TGWTF++ QG I Y +PYSEH SF ELK FV+++ P+ IIP+VN
Sbjct: 832 TGWTFNQTVGVDDILPQTQGNISIYGIPYSEHSSFLELKRFVQWLRPKKIIPTVNVGSWR 891
Query: 715 SANAM 719
S AM
Sbjct: 892 SRKAM 896
>gi|157818805|ref|NP_001099671.1| DNA cross-link repair 1A protein [Rattus norvegicus]
gi|149040461|gb|EDL94499.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae) (predicted)
[Rattus norvegicus]
Length = 1026
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/446 (36%), Positives = 249/446 (55%), Gaps = 26/446 (5%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ + ES +S G + H +RHK+ S +G+ + + L
Sbjct: 586 KRKAQSSLSDLEFDAKNLNESQHSMELS--GERAQHRRKRHKK-SNSPQEGTYQGRSGHL 642
Query: 342 ITDFFLGSITNVKKVS----TPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCC 397
+ LG+++ + + TP+ Q G+ + ++ G + P +
Sbjct: 643 TNNPELGAVSLRRSKAFARRTPSRTQRGA----------VNISESSGGGESRRTCPFYKR 692
Query: 398 VPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
+PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F IYCS IT L+ K+
Sbjct: 693 IPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PIYCSEITGSLLKKKLR 750
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ + LP++ + + G+ V L+ANHCPG+ +ILF+ NG LHTGDFR M
Sbjct: 751 VQEQYIHQLPMDTECIVDGVKVVLLDANHCPGATMILFQLPNGAVTLHTGDFRADPSM-E 809
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGK 574
S+L + +HTL LDTTYC+P Y FP Q+ IQF I A +A + NP+ L + G+Y IGK
Sbjct: 810 RSLLASRKVHTLFLDTTYCSPEYTFPSQQEAIQFAINTAFEAVTLNPRALIVCGTYCIGK 869
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
E++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H++PM + +FK
Sbjct: 870 EKVFLAIADVLGSKVGMSQEKYKTLQCLNI-PEVSSLITTDMCNSLVHLLPMMQI-NFKG 927
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELK 693
L++ + G+F I+AF PTGWT S Q +G I Y +PYSEH S+ E+K
Sbjct: 928 LQNHLKKCGGKFDQILAFRPTGWTHSNNITSIADITPQTKGNIAIYGIPYSEHSSYLEMK 987
Query: 694 EFVKFVSPEHIIPSVNNDGRDSANAM 719
FV+++ P+ IIP+VN S N M
Sbjct: 988 RFVQWLKPQKIIPTVNVGTFQSRNTM 1013
>gi|222628797|gb|EEE60929.1| hypothetical protein OsJ_14663 [Oryza sativa Japonica Group]
Length = 517
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 216/355 (60%), Gaps = 8/355 (2%)
Query: 370 FSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDH 427
+ G R++ + + RK P + +PGTPF VDAF+Y + G C+ +FL+HFH DH
Sbjct: 119 WPGRKRRRGGEVEAAADRKPLACPFYKKIPGTPFTVDAFRYGAVEG-CNAYFLSHFHHDH 177
Query: 428 YQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
Y GLT+ + HG IYC+ +TARLV M + + + + L L+++ I G+ VT LEANHCPG
Sbjct: 178 YGGLTKKWCHGPIYCTALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPG 237
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
+ +I F +GK LHTGDFR S+ M +LQ I+ L LDTTYCNP Y FP +E VI
Sbjct: 238 AALIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVI 297
Query: 548 QFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK 606
F + A + PKTL ++G+Y+IGKE ++L +++ L+ IY +A++ R+L +S
Sbjct: 298 DFAVRTAKRYLQKEPKTLIVVGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSD 357
Query: 607 EDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKK 664
+ ++ S +HV+P+ +L + L+ RF ++AF PTGWTFS+ G +
Sbjct: 358 LS-KMICSDSQSSSLHVLPLSSL-RHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQ 415
Query: 665 KSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ +G I Y VPYSEH SF+EL+EFV F+ P+ +IP+VN S + M
Sbjct: 416 LDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKM 470
>gi|402881531|ref|XP_003904323.1| PREDICTED: DNA cross-link repair 1A protein [Papio anubis]
Length = 1039
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 247/441 (56%), Gaps = 16/441 (3%)
Query: 282 RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKL 341
++K +L +++ + S ES +S++ S ++ ++ S + +G + ++ L
Sbjct: 599 KRKAEKSLSDLEFDASNLNESQLSVELSSERSQR---QKKRRKKSNSLQEGVYQKRSDHL 655
Query: 342 ITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGT 401
I N+ KV T G + KK G + K P + +PGT
Sbjct: 656 INT--ESEAVNLSKVKVFTKSAHGGLQR----GNKKIPESSNVGGSRKKTCPFYKKIPGT 709
Query: 402 PFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDR 460
F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS IT L+ K+ +
Sbjct: 710 GFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEITGNLLKNKLHVQEQY 768
Query: 461 LQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ 520
+ LPL+ + + G+ V L+ANHCPG+++ILF NG +LHTGDFR M S+L
Sbjct: 769 IHPLPLDTECVVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSM-EHSLLA 827
Query: 521 TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFL 579
+H L LDTTYC+P Y FP Q+ VIQF I A +A + NP L + G+Y+IGKE++FL
Sbjct: 828 DQKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEALTLNPHALVVCGTYSIGKEKVFL 887
Query: 580 EVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS 639
+A VL K+ ++ K++ L+CL+ E TT+ S +H++PM + +FK L++
Sbjct: 888 AIADVLGSKVGMSQEKYKTLRCLNIP-EINSLITTDMCSSLVHLLPMMQI-NFKGLQNHL 945
Query: 640 NQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
+Y G+++ I+AF PTGWT S K + + +G I Y +PYSEH S+ E+K FV++
Sbjct: 946 KKYGGKYNQILAFRPTGWTHSNKFPRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQW 1005
Query: 699 VSPEHIIPSVNNDGRDSANAM 719
+ P+ IIP+VN S N M
Sbjct: 1006 LKPQKIIPTVNVGTWKSRNTM 1026
>gi|126273412|ref|XP_001377744.1| PREDICTED: DNA cross-link repair 1A protein [Monodelphis domestica]
Length = 1043
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/338 (42%), Positives = 208/338 (61%), Gaps = 8/338 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + K P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 697 GLRKKKCPFYKKIPGTGFTVDAFQYGAIEG-CTAYFLTHFHSDHYAGLSKKFTF-PVYCS 754
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT+ LV K+ + L LP++ + I V L+ANHCPG+++ILF NG +LH
Sbjct: 755 KITSNLVKSKLCVQEQYLHPLPMDTVCIVNDIKVVLLDANHCPGAVMILFYLPNGTVILH 814
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A ++ + P+
Sbjct: 815 TGDFRADPSMERYSLLANQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINIAFESVTLAPR 874
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
TL + G+Y IGKE++FL +A VL K+ ++ K++ LKCL+ +E TT+ + + +H
Sbjct: 875 TLVVCGTYAIGKEKVFLAIADVLGSKVSMSQEKYKTLKCLEL-QEVNSLITTDWNSALVH 933
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEV 681
++PM + +FK L++ N+ G++ I+AF PTGWT S K + +G I Y +
Sbjct: 934 LLPMMQI-NFKDLQNHLNKCGGKYDCILAFRPTGWTHSEKFDSITDIVPQTKGNISIYGI 992
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH S+ E+K FV+++ P+ II +VN +S M
Sbjct: 993 PYSEHSSYVEMKRFVQWLKPQKIISTVNVGSWESRKTM 1030
>gi|326923949|ref|XP_003208195.1| PREDICTED: DNA cross-link repair 1A protein-like [Meleagris
gallopavo]
Length = 973
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/370 (40%), Positives = 218/370 (58%), Gaps = 12/370 (3%)
Query: 348 GSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQS----KGRKHKDIPTWCCVPGTPF 403
GS+ +++ V +N G SG RK +S +G + K P + +PGT F
Sbjct: 583 GSVEDLEAVKESSNKDGGFANVTSGGQRKWRKRFRESSTTDEGARKKQCPFYKKIPGTGF 642
Query: 404 RVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL 461
VDAF+Y + G C+ +FLTHFH DHY GLT++F +YC+ IT LV K+ + +
Sbjct: 643 TVDAFQYGEIEG-CTAYFLTHFHSDHYCGLTKNFVF-PLYCNKITGNLVKSKLQVKEQYI 700
Query: 462 QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
VLP++ + + GI V L+ANHCPG+ +ILF G A+LHTGDFR M L
Sbjct: 701 NVLPMDTECIVNGIKVLLLDANHCPGATMILFYLPGGTAILHTGDFRADPSMERYPALIG 760
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLE 580
IHTL LDTTYC+P Y FP Q+ VIQF + A + + NP+TL + G+Y+IGK + FL
Sbjct: 761 QKIHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFEMVTLNPRTLVVCGTYSIGKRKSFLA 820
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
+A VL K ++ K++ L+CL+ S + N + +H++PM + +FK L+ N
Sbjct: 821 IAEVLGSKASMSRDKYKTLQCLE-SAAINSLISMNWDGTLLHILPMMQI-NFKGLQDHLN 878
Query: 641 QYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFVKFV 699
+++ F ++AF PTGWT+S + Q +G I Y +PYSEH S+ E+K FV+++
Sbjct: 879 KFSENFDQVLAFKPTGWTYSDSCLSVMDIKPQTRGKITIYGIPYSEHSSYLEMKRFVQWL 938
Query: 700 SPEHIIPSVN 709
P+ IIP+VN
Sbjct: 939 KPQKIIPTVN 948
>gi|56798256|dbj|BAD82911.1| Snm1 [Oryza sativa Japonica Group]
Length = 485
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 148/362 (40%), Positives = 219/362 (60%), Gaps = 17/362 (4%)
Query: 372 GSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQ 429
G R++ + + RK P + +PGTPF VDAF+Y + G C+ +FL+HFH DHY
Sbjct: 121 GRKRRRGGEVEAAADRKPLACPFYKKIPGTPFTVDAFRYGAVEG-CNAYFLSHFHHDHYG 179
Query: 430 GLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSI 489
GLT+ + HG IYC+ +TARLV M + + + + L L+++ I G+ VT LEANHCPG+
Sbjct: 180 GLTKKWCHGPIYCTALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPGAA 239
Query: 490 IILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQF 549
+I F +GK LHTGDFR S+ M +LQ I+ L LDTTYCNP Y FP +E VI F
Sbjct: 240 LIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVIDF 299
Query: 550 VIEA----IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
+ +Q E PKTL ++G+Y+IGKE ++L +++ L+ IY +A++ R+L +S
Sbjct: 300 AVRTAKRYLQKE---PKTLIVVGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWS 356
Query: 606 KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GK 663
+ ++ S +HV+P+ +L + L+ RF ++AF PTGWTFS+ G
Sbjct: 357 DLS-KMICSDSQSSSLHVLPLSSL-RHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGN 414
Query: 664 KKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV---NNDGRDSANAMV 720
+ + +G I Y VPYSEH SF+EL+EFV F+ P+ +IP+V N RD+A+
Sbjct: 415 QLDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDNASTFS 474
Query: 721 SL 722
+
Sbjct: 475 GM 476
>gi|348508875|ref|XP_003441978.1| PREDICTED: DNA cross-link repair 1A protein-like [Oreochromis
niloticus]
Length = 931
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 137/330 (41%), Positives = 209/330 (63%), Gaps = 6/330 (1%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + +PGT F +DAF+Y + + + +FLTHFH DHY GLT++ IYC+ IT LV
Sbjct: 590 PFYKKIPGTKFAIDAFRYGQIEGITAYFLTHFHSDHYGGLTKT-STVPIYCNRITGNLVK 648
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
K+ + + +LP+N + T+ G+ V L+ANHCPG+ ++LF +G+ VLHTGDFR
Sbjct: 649 SKLRVAEQYVHILPMNTEVTVEGVRVILLDANHCPGAAMLLFFLPDGQTVLHTGDFRADP 708
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSY 570
M + L +C + TL LDTTYC+P Y FP+Q+ VI F A + + +P+TL + GSY
Sbjct: 709 SMETCPELLSCRVQTLYLDTTYCSPEYTFPRQQEVINFAASTAFELVTLSPRTLVVCGSY 768
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
++GKE++FL +A VL K+ ++ K+ + CL+ S++ TT+ + +HV+PM L
Sbjct: 769 SVGKEKVFLALAEVLGSKVCLSRDKYNTMCCLE-SEQIKGRLTTDWKAAQVHVLPMMQL- 826
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ-GTIIRYEVPYSEHCSF 689
SF++L+ +++ ++ +VAF PTGWTFS+ + + Q+ G I Y +PYSEH SF
Sbjct: 827 SFRKLQDHLARFSRQYDQLVAFKPTGWTFSQQTESVENIQPQKSGNITIYGIPYSEHSSF 886
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
ELK FV+++ P IIP+VNN + AM
Sbjct: 887 LELKRFVQWLQPLKIIPTVNNGSWANRKAM 916
>gi|354501727|ref|XP_003512940.1| PREDICTED: DNA cross-link repair 1A protein [Cricetulus griseus]
gi|344257217|gb|EGW13321.1| DNA cross-link repair 1A protein [Cricetulus griseus]
Length = 1022
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 213/357 (59%), Gaps = 26/357 (7%)
Query: 359 PTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSH 417
P G +G+ K +SGS + A P + +PGT F VDAF+Y + C+
Sbjct: 663 PQRGSTGTSK-WSGSRELRRAC------------PFYKRIPGTGFTVDAFQYGEVEGCTA 709
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FLTHFH DHY GL++ F IYCS IT LV K+ + + LP++ + + G+ V
Sbjct: 710 YFLTHFHSDHYAGLSKDFER-PIYCSEITGNLVKKKLRVQEQYIHQLPMDTECIVDGVKV 768
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
L+ANHCPG+ +ILF P NG A+LHTGDFR M S+L +HTL LDTTYC+P
Sbjct: 769 VLLDANHCPGASMILFRPPNGAAILHTGDFRADPSM-ERSLLAGQKVHTLYLDTTYCSPE 827
Query: 538 YDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
Y FP Q+ VIQF I A +A + NP+ L + G+Y IGKE++FL +A VL K+ ++ K+
Sbjct: 828 YTFPSQQEVIQFAINTAFEAVTLNPRALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKY 887
Query: 597 RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG 656
+ LKCL+ + TT+ S +H++PM + +FK L+ + G++ I+AF PTG
Sbjct: 888 KTLKCLNLPDVN-SLITTDMCSSLVHLLPMMQI-NFKGLQSHLEKCDGKYDQILAFRPTG 945
Query: 657 WTFSKGKKK----SPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
WT S +P ++ G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 946 WTHSNRITSIADITPQKK---GKISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 999
>gi|115458180|ref|NP_001052690.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|38345210|emb|CAD40784.2| OSJNBb0012E08.8 [Oryza sativa Japonica Group]
gi|113564261|dbj|BAF14604.1| Os04g0401800 [Oryza sativa Japonica Group]
gi|116309317|emb|CAH66404.1| OSIGBa0155K12.7 [Oryza sativa Indica Group]
Length = 481
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 216/355 (60%), Gaps = 8/355 (2%)
Query: 370 FSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDH 427
+ G R++ + + RK P + +PGTPF VDAF+Y + G C+ +FL+HFH DH
Sbjct: 119 WPGRKRRRGGEVEAAADRKPLACPFYKKIPGTPFTVDAFRYGAVEG-CNAYFLSHFHHDH 177
Query: 428 YQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
Y GLT+ + HG IYC+ +TARLV M + + + + L L+++ I G+ VT LEANHCPG
Sbjct: 178 YGGLTKKWCHGPIYCTALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPG 237
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
+ +I F +GK LHTGDFR S+ M +LQ I+ L LDTTYCNP Y FP +E VI
Sbjct: 238 AALIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVI 297
Query: 548 QFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK 606
F + A + PKTL ++G+Y+IGKE ++L +++ L+ IY +A++ R+L +S
Sbjct: 298 DFAVRTAKRYLQKEPKTLIVVGAYSIGKENVYLAISKALQVPIYTDASRRRILHAFGWSD 357
Query: 607 EDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKK 664
+ ++ S +HV+P+ +L + L+ RF ++AF PTGWTFS+ G +
Sbjct: 358 LS-KMICSDSQSSSLHVLPLSSL-RHENLQKYLETLKQRFLAVLAFRPTGWTFSEETGNQ 415
Query: 665 KSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ +G I Y VPYSEH SF+EL+EFV F+ P+ +IP+VN S + M
Sbjct: 416 LDLIKPSSRGKITIYGVPYSEHSSFSELREFVMFLRPQKVIPTVNVGNAASRDKM 470
>gi|449276210|gb|EMC84861.1| DNA cross-link repair 1A protein [Columba livia]
Length = 992
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 147/372 (39%), Positives = 220/372 (59%), Gaps = 16/372 (4%)
Query: 348 GSITNVKKVSTPTNGQSGSRKSFSGSDR------KKHAAKDQSKGRKHKDIPTWCCVPGT 401
GS+ +V V+ ++ SG R KK + G+KH P + +PGT
Sbjct: 602 GSVEDVGAVTESSSANGACANVSSGGQRRWRKKLKKLPVAGEGTGKKH--CPFYKKIPGT 659
Query: 402 PFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
F VDAF+Y + G C+ +FLTHFH DHY GLT++F IYC+ IT LV K+ + +
Sbjct: 660 GFTVDAFQYGEIEG-CTAYFLTHFHSDHYCGLTKNFAF-PIYCNKITGNLVKAKLRVKEE 717
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ VLP++ + + GI V L+ANHCPG+ +ILF +G +LHTGDFR M L
Sbjct: 718 YIHVLPMDTECIVNGIKVLLLDANHCPGATMILFCLPSGTVILHTGDFRADPSMERYPAL 777
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLF 578
+HTL LDTTYC+P Y FP Q+ VIQF + A + + NP+TL + G+Y+IGKE++F
Sbjct: 778 VGQQVHTLYLDTTYCSPEYTFPSQQEVIQFAVNTAFETVTLNPRTLVVCGTYSIGKEKVF 837
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
L +A VL K ++ K++ L+CL+ S + + + + +HV+PM + +FK L+
Sbjct: 838 LAIAEVLGSKASMSRDKYKTLQCLE-SADVSSLISVDWGGTLLHVLPMMQI-NFKSLQDH 895
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSFTELKEFVK 697
+++ F ++AF PTGWT+S + Q +G I Y +PYSEH S+ E+K FV+
Sbjct: 896 LYKFSENFDQVLAFKPTGWTYSDSCLSLVDIKPQTRGRITIYGIPYSEHSSYLEMKRFVQ 955
Query: 698 FVSPEHIIPSVN 709
++ P+ IIP+VN
Sbjct: 956 WLKPQKIIPTVN 967
>gi|405968531|gb|EKC33595.1| DNA cross-link repair 1A protein [Crassostrea gigas]
Length = 1051
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 149/339 (43%), Positives = 200/339 (58%), Gaps = 14/339 (4%)
Query: 379 AAKDQSKGRKH--KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSF 435
A K Q ++ + P + +P T F VDAF Y + C+ + L+HFH DHY G+T+SF
Sbjct: 680 AEKQQKNANRYQKRSCPFYKKIPDTGFTVDAFSYGVIPGCTGYILSHFHYDHYTGMTKSF 739
Query: 436 HHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEP 495
IYCS ITA LV KI + + LPLN+ T + G+++T LEANHCPGS++ILF+
Sbjct: 740 SQ-PIYCSKITANLVISKIKVKESFVHTLPLNKATVVNGVELTFLEANHCPGSVLILFKL 798
Query: 496 QNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
++G+A LHTGDFR M L I L LDTTYCNP Y FP Q VI F + ++
Sbjct: 799 RDGRAFLHTGDFRADPSMEKYPALTGVRISQLYLDTTYCNPTYAFPPQSEVIDFTVNLVR 858
Query: 556 AE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI---QW 611
E NP+TL + GSYTIGKER+F+ +A L KI V K +L CL EDI +
Sbjct: 859 QELQRNPRTLIVCGSYTIGKERIFIAIADALGCKICVMRDKKNILDCL----EDISLRER 914
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR-R 670
N ++S +HV+PM L L+H S + + I+A PTGWTFSK R +
Sbjct: 915 ICLNFNDSCLHVLPMNKLNPKALLEH-SGKLKPSYGNILAIEPTGWTFSKVSSLQEIRPK 973
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ + + Y +PYSEH S+ EL+ FV+FV P IIP+VN
Sbjct: 974 YNRDGVKIYGIPYSEHSSYLELQRFVQFVKPGKIIPTVN 1012
>gi|255543475|ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223547811|gb|EEF49303.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 493
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/329 (42%), Positives = 208/329 (63%), Gaps = 6/329 (1%)
Query: 385 KGRKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
K K + P + +PGTPF VDAF+Y +CS +FLTHFH DHY GLT+ + HG IYC+
Sbjct: 147 KSIKPRVCPFYKKIPGTPFTVDAFRYGPIQNCSAYFLTHFHADHYGGLTKGWSHGPIYCT 206
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
+TARL+ + + + + L LN + I G+ VT LEANHCPG+ ++ F NG LH
Sbjct: 207 QLTARLLKLCLYVNSSFIHPLDLNTEYAIEGVRVTLLEANHCPGAALLHFRLSNGLCYLH 266
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ-AESFNPK 562
TGDFR S+ M S +L ++ L LDTTYCNP Y FP +E V+ +V+ + P+
Sbjct: 267 TGDFRASKVMQSYHLLVNQKVNALYLDTTYCNPKYKFPSKEDVLNYVVRVTKDFLKQQPE 326
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
TL ++G+Y+IGKE ++L +++ L KIY +A++ ++L+ +S + T ++ +H
Sbjct: 327 TLIVVGAYSIGKECVYLSISKALGVKIYASASRRQILESFGWSDLS-RSLCTQPKDTPLH 385
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYE 680
V+P+ +L + LK +Y ++ ++AF PTGWT+S+ GKK R +G + Y
Sbjct: 386 VLPISSL-RVETLKDYLKKYINQYRAVLAFRPTGWTYSENVGKKLDLIRPISKGNVTIYG 444
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
VPYSEH SFTELKEFV+F+ P+ IIP+VN
Sbjct: 445 VPYSEHSSFTELKEFVEFLKPDKIIPTVN 473
>gi|168063695|ref|XP_001783805.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664687|gb|EDQ51397.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 334
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 140/316 (44%), Positives = 203/316 (64%), Gaps = 6/316 (1%)
Query: 398 VPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+PGTPF VDAFK+ + C +FLTHFH DHY GLTRS+ HG I+C+ ITARLV+M +G+
Sbjct: 1 MPGTPFTVDAFKFGAVEGCKAYFLTHFHSDHYGGLTRSWSHGPIFCTEITARLVSMHLGV 60
Query: 457 PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
L+ + L + + G+ V LEANHCPG+ +ILF+ G+ +LHTGDFR + M
Sbjct: 61 DSHWLRPMKLGCVSIVEGVKVQFLEANHCPGAALILFQTSCGQLILHTGDFRACKSMQDY 120
Query: 517 SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNPKTLFLIGSYTIGKE 575
L I +L LDTTYCNP Y+FP QE VI V++ A S NPKTL +G+Y+IGKE
Sbjct: 121 PELLGARITSLYLDTTYCNPKYNFPLQEDVINHVVKLTSAALSRNPKTLVTVGAYSIGKE 180
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
R++L +A+ L +IY + + R L+ LD+ + ++ S +HV+P+ L + K
Sbjct: 181 RVYLGIAKALSLRIYADKRRVRTLRALDW-PDLTDRLCSDASSSRLHVLPISHLNATKLR 239
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELK 693
+M + + +S ++AF PTGWT+S+ G S + + G + Y VPYSEH S++EL+
Sbjct: 240 AYMQSLHP-TYSAVLAFRPTGWTYSEKIGSNLSELKPQRSGVVTIYGVPYSEHSSYSELQ 298
Query: 694 EFVKFVSPEHIIPSVN 709
EFVKF+ P+ ++ +VN
Sbjct: 299 EFVKFLRPQKVLATVN 314
>gi|291404840|ref|XP_002718800.1| PREDICTED: DNA cross-link repair 1A isoform 2 [Oryctolagus cuniculus]
Length = 1028
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 211/348 (60%), Gaps = 9/348 (2%)
Query: 367 RKSFSGSDRKKHAAKDQSKGR--KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHF 423
R ++ G R+ + S R + + P + +PGT F VDAF+Y + CS +FLTHF
Sbjct: 662 RSAYGGLQRRNSKISESSDARELRKRTCPFYKKIPGTGFTVDAFQYGMIEGCSAYFLTHF 721
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHY GL+++ +YC+ IT L+ K+ + + LP++ + + G+ V L+AN
Sbjct: 722 HSDHYAGLSKNSTF-PVYCTEITGNLLKNKLHVQEQYIHTLPMDTECVVNGVKVVLLDAN 780
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQ 543
HCPG+ +ILF NG +LHTGDFR + M S+L +H L LDTTYC+P Y FP Q
Sbjct: 781 HCPGAAMILFHLPNGTVMLHTGDFRANPSM-ERSLLAGQKVHVLYLDTTYCSPEYTFPSQ 839
Query: 544 EAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ VIQF I A +A + NP+ L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL
Sbjct: 840 QEVIQFAINTAFEAVTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCL 899
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-K 661
+ E TT+ S +H++PM + +FK L+ ++ G++ I+AF PTGWT S K
Sbjct: 900 NIP-EINSLITTDMCNSLVHLLPMMQI-NFKGLQSHLKKFGGKYDEILAFRPTGWTHSDK 957
Query: 662 GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ +G I Y +PYSEH SF E+K FV+++ P+ IIP+VN
Sbjct: 958 LTTMADVIPQTKGNISIYGIPYSEHSSFLEMKRFVQWLKPQKIIPTVN 1005
>gi|291404838|ref|XP_002718799.1| PREDICTED: DNA cross-link repair 1A isoform 1 [Oryctolagus cuniculus]
Length = 1043
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 140/348 (40%), Positives = 211/348 (60%), Gaps = 9/348 (2%)
Query: 367 RKSFSGSDRKKHAAKDQSKGR--KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHF 423
R ++ G R+ + S R + + P + +PGT F VDAF+Y + CS +FLTHF
Sbjct: 677 RSAYGGLQRRNSKISESSDARELRKRTCPFYKKIPGTGFTVDAFQYGMIEGCSAYFLTHF 736
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHY GL+++ +YC+ IT L+ K+ + + LP++ + + G+ V L+AN
Sbjct: 737 HSDHYAGLSKNSTF-PVYCTEITGNLLKNKLHVQEQYIHTLPMDTECVVNGVKVVLLDAN 795
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQ 543
HCPG+ +ILF NG +LHTGDFR + M S+L +H L LDTTYC+P Y FP Q
Sbjct: 796 HCPGAAMILFHLPNGTVMLHTGDFRANPSM-ERSLLAGQKVHVLYLDTTYCSPEYTFPSQ 854
Query: 544 EAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ VIQF I A +A + NP+ L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL
Sbjct: 855 QEVIQFAINTAFEAVTLNPRALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLRCL 914
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-K 661
+ E TT+ S +H++PM + +FK L+ ++ G++ I+AF PTGWT S K
Sbjct: 915 NIP-EINSLITTDMCNSLVHLLPMMQI-NFKGLQSHLKKFGGKYDEILAFRPTGWTHSDK 972
Query: 662 GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ +G I Y +PYSEH SF E+K FV+++ P+ IIP+VN
Sbjct: 973 LTTMADVIPQTKGNISIYGIPYSEHSSFLEMKRFVQWLKPQKIIPTVN 1020
>gi|432922357|ref|XP_004080312.1| PREDICTED: DNA cross-link repair 1A protein-like [Oryzias latipes]
Length = 879
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 207/331 (62%), Gaps = 8/331 (2%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PGT F +DAF+Y + G S +FLTHFH DHY GLTR+ IYC+ IT LV
Sbjct: 540 PFYKKIPGTKFAIDAFQYGEIEG-ISAYFLTHFHSDHYGGLTRN-STLPIYCNKITGNLV 597
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
K+ + + + +LP+N + + G+ + L+ANHCPG+ ++LF +G+ VLHTGDFR
Sbjct: 598 KSKLRVAEEYVHILPMNTEVIVEGVRICLLDANHCPGAAMLLFFLPDGQTVLHTGDFRAD 657
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVI-EAIQAESFNPKTLFLIGS 569
M + L C + TL LDTTYC+P Y FPKQ+ VI F A ++ + NP+TL + GS
Sbjct: 658 PSMETYPELLGCRVQTLYLDTTYCSPEYTFPKQQEVINFAANRAFESVTLNPRTLVVCGS 717
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
Y++GKE++FL +A VL K+ ++ K+ + CL+ S++ + TT+ + +HV+PM L
Sbjct: 718 YSVGKEKVFLALAEVLGSKVSLSKDKYNTMCCLE-SEQIKKRITTDWKGAQVHVLPMMQL 776
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCS 688
+FK+L+ +Y+ ++ +VAF PTGWTFS+ + Q G + Y +PYSEH S
Sbjct: 777 -TFKKLQDHLARYSSQYDQLVAFKPTGWTFSQQVGSVDDIQPQISGNVSVYGIPYSEHSS 835
Query: 689 FTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
F ELK FV+++ P IIP+VN S AM
Sbjct: 836 FLELKRFVQWLRPLKIIPTVNVGSWASRKAM 866
>gi|194205654|ref|XP_001495731.2| PREDICTED: DNA cross-link repair 1A protein [Equus caballus]
Length = 1043
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/325 (43%), Positives = 204/325 (62%), Gaps = 7/325 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ K P + +PGT F VDAF+Y L C+ +FLTHFH DHY GL+++F +YCS IT
Sbjct: 700 RKKTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEIT 758
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + G+ V L+ANHCPG+++ILF NG +LHTGD
Sbjct: 759 GNLLKCKLHVQEQYIHPLPMDTGCIVNGVKVVFLDANHCPGAVMILFYLPNGNVMLHTGD 818
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L + +HTL LDTTYC+P Y FP Q+ VIQFVI A +A + NP TL
Sbjct: 819 FRADPSM-ERSLLASQRVHTLYLDTTYCSPEYSFPSQQEVIQFVINTAFEAVTLNPCTLV 877
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H++P
Sbjct: 878 VCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCNSLVHLLP 936
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPYS 684
M + +FK L+ + G++ I+AF PTGWT S K + +G I Y VPYS
Sbjct: 937 MMQI-NFKGLQSHLKKCGGKYDRILAFRPTGWTHSNKLTSIADVLPRTKGNISIYGVPYS 995
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVN 709
EH SF E+K FV+++ P+ IIP+VN
Sbjct: 996 EHSSFLEMKRFVQWLKPQKIIPTVN 1020
>gi|428170906|gb|EKX39827.1| hypothetical protein GUITHDRAFT_76035 [Guillardia theta CCMP2712]
Length = 317
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 142/308 (46%), Positives = 193/308 (62%), Gaps = 15/308 (4%)
Query: 398 VPG-TPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
VPG + F VD F H+ L+HFH DHY GL + F+ GKIYC+ +TARLV +KIG+
Sbjct: 17 VPGASSFTVDNFHVRNSVVKHYILSHFHADHYAGLRKKFNSGKIYCTPVTARLVKLKIGV 76
Query: 457 PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
D L + + I G VT L ANHCPGS +ILFE +GK LHTGDFRF + +
Sbjct: 77 SADHLVAVAYHSPLLIEGTRVTFLPANHCPGSALILFETPDGKCHLHTGDFRFHPKFSED 136
Query: 517 SVLQTCP------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF-NPKTLFLIGS 569
VL + I L LDTTYC+P ++FP QE I+FV E +++ +F N +TLFL+GS
Sbjct: 137 PVLSSFTSTGSRKIDHLFLDTTYCSPEHEFPAQEDAIRFVGELVKSNAFANRETLFLVGS 196
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
YTIGKE +FL+ AR K+YV+ AK +VL+CL+ +ED Q TT HE+ +HV+PM +
Sbjct: 197 YTIGKEEVFLQAARESGCKLYVHPAKKKVLECLELKEEDQQRLTTVAHEARLHVVPMGCI 256
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
+FK++ G++ +V PTGWTFS G R ++G ++ Y VPYSEH SF
Sbjct: 257 -NFKQMSAYLGMAKGKYKTVVGIRPTGWTFSGGP------RQERGPLVIYGVPYSEHSSF 309
Query: 690 TELKEFVK 697
+E++ VK
Sbjct: 310 SEIRSMVK 317
>gi|443683308|gb|ELT87607.1| hypothetical protein CAPTEDRAFT_226585 [Capitella teleta]
Length = 657
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/410 (40%), Positives = 230/410 (56%), Gaps = 29/410 (7%)
Query: 320 ERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHA 379
E ++E K+ V S++ + L++ F GS K S P++ Q+ +
Sbjct: 238 EINEERKKIFVKDSNQTS---LLS--FFGS-----KNSKPSSNQNSAATQLKPLKTDNSG 287
Query: 380 AKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHH 437
K R K P + +PGT F VDAF Y + G C +FL+HFH DHY GLT+ F
Sbjct: 288 NKQPWTARIKKQCPFYKKIPGTSFTVDAFNYGAIPG-CRAYFLSHFHYDHYGGLTKKFQQ 346
Query: 438 GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN 497
+IYC +T LV K+G+ R++ L +N I G++VT L+ANHCPGS++ LF +N
Sbjct: 347 -QIYCCKVTGNLVERKLGVASKRVRKLEMNTLYVIEGVEVTLLDANHCPGSVLFLFRLEN 405
Query: 498 GKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE 557
G+++LHTGDFR + +M S LQ I L LDTTYC+P Y FP Q VI F ++ AE
Sbjct: 406 GRSILHTGDFRANVDMESYPALQGVKISQLYLDTTYCDPNYAFPPQRDVIDFAVKL--AE 463
Query: 558 SFN---PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
F+ P L ++GSYTIGKER+FL +A L KI + K V++CLD +Q T
Sbjct: 464 DFHRHQPNGLIVVGSYTIGKERIFLAIAEALSCKICITRDKQIVMECLD--DPCVQRMLT 521
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS-----PGR 669
E + +HV+PM L L+++ N+ RF ++A PTGW+ S G P R
Sbjct: 522 REPSAVVHVLPMNHLRYDTLLEYL-NKLKPRFDSVLALQPTGWSHSSGGGGGLDAIRPKR 580
Query: 670 RWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
QG I Y VPYSEH SF E+K FV+F+ PE IIP+VNN +S M
Sbjct: 581 --SQGNITIYGVPYSEHSSFLEMKRFVQFIRPEKIIPTVNNGSAESRQKM 628
>gi|296221247|ref|XP_002756651.1| PREDICTED: DNA cross-link repair 1A protein [Callithrix jacchus]
Length = 1046
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 204/326 (62%), Gaps = 9/326 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS IT
Sbjct: 703 RKKSCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEIT 761
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHTGD
Sbjct: 762 GNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFCLPNGTVILHTGD 821
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L +H L LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L
Sbjct: 822 FRADPSM-ERSLLANREVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 880
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ-WFTTNEHESHIHVM 624
+ G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ DI TT+ S +H++
Sbjct: 881 VCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP--DINSLITTDMCSSLVHLL 938
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPY 683
PM + +FK L+ +Y G++ I+AF PTGWT S K + + +G I Y +PY
Sbjct: 939 PMMQI-NFKGLQSHLKKYGGKYDQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPY 997
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVN 709
SEH SF E+K FV+++ P+ IIP+VN
Sbjct: 998 SEHSSFLEMKRFVQWLKPQKIIPTVN 1023
>gi|344274721|ref|XP_003409163.1| PREDICTED: DNA cross-link repair 1A protein [Loxodonta africana]
Length = 1046
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + + P + +PGT F VDAF+Y DC+ +FLTHFH DHY GL++SF +YCS
Sbjct: 701 GLRKRSCPFYKKIPGTGFTVDAFQYGSIEDCTAYFLTHFHSDHYAGLSKSFT-SPVYCSE 759
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LP++ + + G+ V L+ANHCPG++++LF NG +LHT
Sbjct: 760 ITGNLLKNKLHVQEQYIHPLPMDTECIVNGVKVVLLDANHCPGAVMVLFCLPNGTVILHT 819
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 820 GDFRADPTM-ERSLLVNWRVHTLYLDTTYCSPEYCFPSQQEVIQFAINTAFEAVTLNPRA 878
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K+ L+CL+ E TT+ + +H+
Sbjct: 879 LVVCGTYSIGKEKVFLAIADVLGSKVGMSREKYTTLQCLNIP-EINSLITTDMCSALVHL 937
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVP 682
+PM + +FK L+ +Y G++ ++AF PTGWT S Q +G I Y +P
Sbjct: 938 LPMMQI-NFKGLQKHLKKYGGKYDQVLAFQPTGWTHSNTLTSIADIIPQTRGNISIYGIP 996
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 997 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1023
>gi|196013719|ref|XP_002116720.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens]
gi|190580698|gb|EDV20779.1| hypothetical protein TRIADDRAFT_31281 [Trichoplax adhaerens]
Length = 375
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 212/358 (59%), Gaps = 12/358 (3%)
Query: 356 VSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRG 413
VS N S RK + D RK P + + GT F VDAF Y + G
Sbjct: 7 VSQSKNSSHNQESKQSNKIRKSNKWNDPKGKRK---CPFYKKITGTTFCVDAFSYGPISG 63
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA 473
+ +FL+HFH DHY GL ++F+ K+YC+ ITA LV+ + + + +LP++Q +
Sbjct: 64 -ITAYFLSHFHSDHYYGLNKTFN-AKLYCNKITANLVSRMLHVEKQYITILPMHQSVVVD 121
Query: 474 GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTY 533
++VT L+ANHCPGS + +F +NG LHTGDFR SEEM + +L+ I L LDTTY
Sbjct: 122 DVEVTLLDANHCPGSAMFVFRLRNGSVHLHTGDFRASEEMEKLDILKNSVISELYLDTTY 181
Query: 534 CNPLYDFPKQEAVIQFVIEAI-QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVN 592
C+P YDFP Q+ V+ +V+ + A N + L G+YTIGKE++FL +AR L K+Y
Sbjct: 182 CDPSYDFPSQKFVLDYVLATVTDALKCNKRCLVACGTYTIGKEKVFLAIARALECKVYAQ 241
Query: 593 AAKFRVLKCLDFSKEDIQ-WFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA 651
K L+CL+ E+ + FT++ H + +HV+P+W++++ K L++ +Q A +F +
Sbjct: 242 KNKLGTLQCLEI--ENFKTLFTSDPHSTFLHVLPIWSVSA-KFLRNYLDQNADQFDCAIG 298
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
F PTGWT + S Q G+I Y VPYSEH S++E++ FV+F P IIP+VN
Sbjct: 299 FKPTGWTHTNNVTASGIVARQYGSISIYGVPYSEHSSYSEMRRFVQFTKPRKIIPTVN 356
>gi|120537811|gb|AAI29477.1| Dclre1a protein [Danio rerio]
Length = 431
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 218/374 (58%), Gaps = 9/374 (2%)
Query: 349 SITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAF 408
++ + + T T G+ G R G R ++ + P + +PGT F VDAF
Sbjct: 34 AVEDSAALPTQTEGKRGGRAE--GRKRWNRGKATDGDPKEPERCPFYKKIPGTGFAVDAF 91
Query: 409 KY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLN 467
+Y + + +FLTHFH DHY GL + IYC+ +T+ LV K+ + + VLP+N
Sbjct: 92 QYGVVEGVTAYFLTHFHSDHYGGLKKD-SAVPIYCNKVTSNLVKSKLKVDEQYIHVLPMN 150
Query: 468 QKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTL 527
+ + G+ VT L+ANHCPG++++LF +G+ VLHTGDF+ M LQ I TL
Sbjct: 151 TECIVQGVKVTLLDANHCPGAVMLLFVLPDGQTVLHTGDFQADPSMERYPELQGLRIQTL 210
Query: 528 ILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR 586
LDTTYC+P Y FP Q+ V+ F + A + + NP+TL + G+Y++GKE++FL V+ VL
Sbjct: 211 YLDTTYCSPEYTFPTQQEVVTFAVNTAFERVTLNPRTLVVCGTYSVGKEKVFLAVSEVLS 270
Query: 587 KKIYVNAAKFRVLKCLDFSKEDI-QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGR 645
K+ ++ K+ + CL+ EDI Q TTN + +HV+PM + +FK L+ +++ +
Sbjct: 271 SKVCLSKDKYNTMCCLE--SEDIGQRITTNWQSAQVHVLPMMQI-NFKNLQTHLKKFSKK 327
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHII 705
+ +VAF PTGWTF++ QG I Y +PYSEH SF ELK FV+++ P+ II
Sbjct: 328 YDQLVAFKPTGWTFNQTVGVDDILPQTQGNISIYGIPYSEHSSFLELKRFVQWLRPKKII 387
Query: 706 PSVNNDGRDSANAM 719
P+VN S AM
Sbjct: 388 PTVNVGSWRSRKAM 401
>gi|410976105|ref|XP_003994466.1| PREDICTED: DNA cross-link repair 1A protein [Felis catus]
Length = 1049
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 204/325 (62%), Gaps = 7/325 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ K P + +PGT F VDAF+Y L C+ +FLTHFH DHY GL+++F +YCS IT
Sbjct: 706 RKKTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEIT 764
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + + G+ V L+ANHCPG+++ILF NGK +LHTGD
Sbjct: 765 GNLLKSKLHMQKQYVHPLPMDTECIVNGVKVILLDANHCPGAVMILFYLPNGKVLLHTGD 824
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L
Sbjct: 825 FRAHPTM-ERSLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLV 883
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ + + TT+ S +H++P
Sbjct: 884 VCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELN-SLITTDMCNSLVHLLP 942
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYS 684
M + +FK L+ + G++ I+AF PTGWT S Q +G I Y +PYS
Sbjct: 943 MMQI-NFKALQSHLKKCGGKYDQILAFRPTGWTHSNKLTGIADIIPQTKGNISIYGIPYS 1001
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVN 709
EH S+ E+K FV+++ P+ IIP+VN
Sbjct: 1002 EHSSYLEMKRFVQWLKPQKIIPTVN 1026
>gi|73620752|sp|Q9JIC3.2|DCR1A_MOUSE RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A
Length = 1026
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 9/338 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 681 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 738
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT L+ K+ + ++ LP++ + + + V L+ANHCPG+ +ILF+ NG +LH
Sbjct: 739 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILH 798
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 799 TGDFRADPSM-ERSRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPR 857
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L + G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ +S +H
Sbjct: 858 ALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCDSLVH 916
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEV 681
++PM + +FK L+ + G++ I+AF PTGWT S + Q +G I Y +
Sbjct: 917 LLPMMQI-NFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGI 975
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 976 PYSEHSSYLEMKRFVQWLKPQKIIPTVNVGSFRSRNTM 1013
>gi|60359840|dbj|BAD90139.1| mKIAA0086 protein [Mus musculus]
Length = 984
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 9/338 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 639 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 696
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT L+ K+ + ++ LP++ + + + V L+ANHCPG+ +ILF+ NG +LH
Sbjct: 697 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILH 756
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 757 TGDFRADPSM-ERSRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPR 815
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L + G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ +S +H
Sbjct: 816 ALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNI-PEVSSLITTDMCDSLVH 874
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEV 681
++PM + +FK L+ + G++ I+AF PTGWT S + Q +G I Y +
Sbjct: 875 LLPMMQI-NFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGI 933
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 934 PYSEHSSYLEMKRFVQWLKPQKIIPTVNVGSFRSRNTM 971
>gi|148669815|gb|EDL01762.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform CRA_b
[Mus musculus]
Length = 1029
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 9/338 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 684 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 741
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT L+ K+ + ++ LP++ + + + V L+ANHCPG+ +ILF+ NG +LH
Sbjct: 742 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILH 801
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 802 TGDFRADPSM-ERSRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPR 860
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L + G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ +S +H
Sbjct: 861 ALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCDSLVH 919
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEV 681
++PM + +FK L+ + G++ I+AF PTGWT S + Q +G I Y +
Sbjct: 920 LLPMMQI-NFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGI 978
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 979 PYSEHSSYLEMKRFVQWLKPQKIIPTVNVGSFRSRNTM 1016
>gi|403259476|ref|XP_003922238.1| PREDICTED: DNA cross-link repair 1A protein [Saimiri boliviensis
boliviensis]
Length = 1048
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 138/325 (42%), Positives = 201/325 (61%), Gaps = 7/325 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS IT
Sbjct: 705 RKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFIF-PVYCSEIT 763
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LPL + + G+ V L+ANHCPG+++ILF NG +LHTGD
Sbjct: 764 GNLLKNKLHVQEQYIHPLPLETECIVNGVKVVLLDANHCPGAVMILFCLPNGTVILHTGD 823
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L +H L LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L
Sbjct: 824 FRADPSM-ERSLLANRKVHMLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALV 882
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H++P
Sbjct: 883 VCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCSSLVHLLP 941
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPYS 684
M + +FK L+ +Y G++ I+AF PTGWT S K + +G I Y +PYS
Sbjct: 942 MMQI-NFKSLQSHLKKYGGKYDQILAFKPTGWTHSNKFTSIADVIPQTKGNISIYGIPYS 1000
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVN 709
EH S+ E+K FV+++ P+ IIP+VN
Sbjct: 1001 EHSSYLEMKRFVQWLKPQKIIPTVN 1025
>gi|194042051|ref|XP_001926894.1| PREDICTED: DNA cross-link repair 1A protein [Sus scrofa]
Length = 1058
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/325 (41%), Positives = 204/325 (62%), Gaps = 7/325 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ + P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL+++F +YCS +T
Sbjct: 715 RKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEVT 773
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + + G+ V L+ANHCPG++++LF NG +LHTGD
Sbjct: 774 GNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGAVMVLFHLPNGHVILHTGD 833
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP TL
Sbjct: 834 FRADPTM-ERSLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPHTLV 892
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y+IGKE++FL +A VL K+ ++ K+ L+CL+ E + TT+ S +H++P
Sbjct: 893 VCGTYSIGKEKVFLAIADVLGSKVGMSKEKYNTLRCLNIP-EINSFITTDMCNSLVHLLP 951
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYS 684
M + +FK L++ ++ G+++ I+AF PTGWT S Q +G I Y +PYS
Sbjct: 952 MMQI-NFKGLQNHLKKFGGKYNQILAFRPTGWTHSNKLTSIADVLPQTKGNISIYGIPYS 1010
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVN 709
EH S+ E+K FV+++ P IIP+VN
Sbjct: 1011 EHSSYPEMKRFVQWLKPRIIIPTVN 1035
>gi|347543745|ref|NP_061301.3| DNA cross-link repair 1A protein [Mus musculus]
Length = 1047
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 140/338 (41%), Positives = 205/338 (60%), Gaps = 9/338 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 702 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 759
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT L+ K+ + ++ LP++ + + + V L+ANHCPG+ +ILF+ NG +LH
Sbjct: 760 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILH 819
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 820 TGDFRADPSM-ERSRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPR 878
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L + G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ +S +H
Sbjct: 879 ALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCDSLVH 937
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEV 681
++PM + +FK L+ + G++ I+AF PTGWT S + Q +G I Y +
Sbjct: 938 LLPMMQI-NFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGI 996
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 997 PYSEHSSYLEMKRFVQWLKPQKIIPTVNVGSFRSRNTM 1034
>gi|345792823|ref|XP_535018.3| PREDICTED: DNA cross-link repair 1A protein [Canis lupus familiaris]
Length = 1049
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 203/326 (62%), Gaps = 9/326 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ K P + +PGT F VDAF+Y L C+ +FLTHFH DHY GL+++F +YCS IT
Sbjct: 706 RKKTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEIT 764
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + + G+ V L+ANHCPG+++ILF NG +LHTGD
Sbjct: 765 GNLLKSKLHVQKQYIHPLPMDTECIVNGVKVVLLDANHCPGAVMILFYLPNGNVLLHTGD 824
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L
Sbjct: 825 FRADPTM-ERSRLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTRNPRVLV 883
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF-TTNEHESHIHVM 624
+ G+Y+IGKE++FL +A VL ++ ++ K++ L+CL+ D+ F TT+ S +H++
Sbjct: 884 VCGTYSIGKEKVFLAIADVLGSRVAMSQEKYKTLQCLNIP--DLNSFITTDMCNSLVHLL 941
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPY 683
PM + +FK L+ + G F+ I+AF PTGWT S Q +G I Y +PY
Sbjct: 942 PMMQI-NFKALQSHLKKCGGEFNQILAFRPTGWTHSNQLTNIRDIVPQIKGNISIYGIPY 1000
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVN 709
SEH S+ ELK FV+++ P+ IIP+VN
Sbjct: 1001 SEHSSYLELKRFVQWLKPQKIIPTVN 1026
>gi|348578689|ref|XP_003475115.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair 1A protein-like
[Cavia porcellus]
Length = 1053
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 203/326 (62%), Gaps = 9/326 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL+++F +YCS I
Sbjct: 710 RKRTCPFYKKIPGTGFTVDAFQYGAIEG-CTAYFLTHFHSDHYAGLSKNFTF-PVYCSEI 767
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
T L+ K+ + + LP++ + + G+ V L+ANHCPG+ +ILF +G VLHTG
Sbjct: 768 TGSLLKNKLHVQEQYIHTLPMDTECIVNGVKVILLDANHCPGAAMILFCLPDGTVVLHTG 827
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTL 564
DFR M S+L +H L LDTTYC+P Y FP Q+ VIQF I A + + NP+ L
Sbjct: 828 DFRADPSM-EHSLLSGHKVHVLYLDTTYCSPEYTFPSQQEVIQFAINTAFETVTQNPRAL 886
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
+ G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ S E TT+ + S +H++
Sbjct: 887 VVCGTYCIGKEKVFLAIADVLGSKVGMSEEKYKTLRCLNIS-EINSLITTDMYNSLVHLL 945
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPY 683
PM + +FK L+ +Y G ++ I+AF PTGWT S + Q +G I Y +PY
Sbjct: 946 PMMQI-NFKNLQSHLKKYGGEYNQILAFRPTGWTHSNKLTRIADVTPQTKGNISIYGIPY 1004
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVN 709
SEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 1005 SEHSSYLEMKRFVQWLKPQKIIPTVN 1030
>gi|357508501|ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
Length = 511
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/353 (40%), Positives = 210/353 (59%), Gaps = 24/353 (6%)
Query: 364 SGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTH 422
+G RKSF G R + P + +PGT F VDAF+Y +CS +FL+H
Sbjct: 156 TGKRKSFHGEKRVT------------RSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSH 203
Query: 423 FHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEA 482
FH DHY GL++ + HG IYCS +T RLV M + + + L + + I GI VT ++A
Sbjct: 204 FHADHYGGLSKKWSHGPIYCSPLTGRLVQMCLYVNPSYICPLEFDTEYVIDGIKVTLIDA 263
Query: 483 NHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPK 542
NHCPG+ +I FE NG+ LHTGDFR + M + ++ L LDTTYCNP Y FP
Sbjct: 264 NHCPGAALIHFELPNGQCYLHTGDFRACKLMQDYHLFVNKRVNVLYLDTTYCNPKYKFPS 323
Query: 543 QEAVIQFVIEAIQAE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL-- 599
++ V+ +V++ P+TL ++G+Y+IGKE ++L +++ L KI+VNA++ R+L
Sbjct: 324 KDDVLNYVVKITNNHLKKYPRTLVVVGAYSIGKECVYLAISKALGVKIHVNASRRRILLA 383
Query: 600 -KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWT 658
C D+S TN + + +HV+PM +L + LK Y +F+ ++AF PTGWT
Sbjct: 384 YDCPDYSDR----LCTNGNNTLLHVLPMSSL-RIETLKEYLKTYKEQFTSVLAFRPTGWT 438
Query: 659 FSK--GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
FS+ G + + G I Y VPYSEH SFTEL++FV+F+ P+ IIP+VN
Sbjct: 439 FSEKIGNDLALIKPVSNGNITTYGVPYSEHSSFTELRDFVQFLRPDKIIPTVN 491
>gi|390360524|ref|XP_796713.3| PREDICTED: DNA cross-link repair 1A protein-like
[Strongylocentrotus purpuratus]
Length = 602
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 134/326 (41%), Positives = 209/326 (64%), Gaps = 12/326 (3%)
Query: 401 TPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
T F VDAF+Y + C +FL+HFH DHY GLT+ F ++YCS +T LV ++ + +
Sbjct: 252 TSFTVDAFRYGVIPGCKAYFLSHFHYDHYGGLTKHFDQ-QLYCSKVTGNLVISRLNVAAE 310
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+++LP+N+ + G++VT LEANHCPG+++ L++ ++G LHTGDFR EM L
Sbjct: 311 YVKILPMNEPCKVDGVEVTLLEANHCPGAVMFLYKLKSGVIYLHTGDFRADAEMELYPQL 370
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLF 578
+C ++ L LDTTYC+P Y FP Q VI+F ++ A+QA N KTL + +YTIGKE++F
Sbjct: 371 SSCHVNQLYLDTTYCDPQYKFPSQTEVIEFAVKIAVQAVKSNKKTLIVCATYTIGKEKVF 430
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESH---IHVMPMWTLASFKRL 635
+A L K+YV++ K +VL+CL+ +D+ T ++++ +HV+ M + + ++L
Sbjct: 431 RAIAEALECKVYVDSRKLKVLECLE--DDDLMSLLTRDNKTSACGLHVIAM-NMLNHQKL 487
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG--RRWQQGTIIRYEVPYSEHCSFTELK 693
K +Q++ R+ I+AF PTGWT S K +SP + + G Y +PYSEH S++E+K
Sbjct: 488 KEYLSQFSSRYDNILAFKPTGWTHS-DKVESPSDIKPSKSGKSTIYGIPYSEHSSYSEMK 546
Query: 694 EFVKFVSPEHIIPSVNNDGRDSANAM 719
FV+F+S + I+P+VNN AM
Sbjct: 547 RFVQFISADKILPTVNNGNPQKRKAM 572
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 153/237 (64%), Gaps = 8/237 (3%)
Query: 398 VPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P T F VDAF+Y + C +FL+HFH DHY GLT+ F ++YCS +T LV +I +
Sbjct: 1 MPDTSFTVDAFRYGVIPGCKAYFLSHFHYDHYGGLTKHFDQ-QLYCSKVTGNLVITRIKV 59
Query: 457 PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
+ +++LP+N + G++VT LEANHCPG+++ L++ ++G LHTGDFR EM
Sbjct: 60 AAEYVKILPMNTPCKVDGVEVTLLEANHCPGAVMFLYKLKSGVIYLHTGDFRADAEMELY 119
Query: 517 SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKE 575
L +C ++ L LDTTYC+P Y FP Q VI+F ++ A+QA N KTL + +YTIGKE
Sbjct: 120 PQLSSCHVNQLYLDTTYCDPQYKFPSQTEVIEFAVKTAVQAVKSNKKTLIVCATYTIGKE 179
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES---HIHVMPMWTL 629
++F +A L K+YV++ K +VL+CL+ +D+ T ++++ +HV+ M L
Sbjct: 180 KVFRAIAEALECKVYVDSRKLKVLECLE--DDDLMSLLTRDNKAATCRLHVIAMNML 234
>gi|355682943|gb|AER97011.1| DNA cross-link repair 1A [Mustela putorius furo]
Length = 504
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/330 (43%), Positives = 204/330 (61%), Gaps = 8/330 (2%)
Query: 393 PTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + +PGT F VDAF+Y L C+ +FLTHFH DHY GL+++F IYCS IT L+
Sbjct: 168 PFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PIYCSEITGNLLK 226
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
K+ I + LP++ + + GI V L+ANHCPG+++ILF NG +LHTGDFR
Sbjct: 227 SKLHIQKQYIHPLPMDTECIVNGIKVVLLDANHCPGAVMILFHLPNGNVLLHTGDFRADP 286
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSY 570
M S L IHTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L + G+Y
Sbjct: 287 TMER-SRLAGQKIHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLIVCGTY 345
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+IGKE++FL +A VL K+ ++ K++ L+CL+ + + + TT+ S +H++PM +
Sbjct: 346 SIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELN-SFITTDMCSSRVHLLPMMQI- 403
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEHCSF 689
+FK L+ + G++ I+AF PTGWT S + Q +G I Y +PYSEH S+
Sbjct: 404 NFKALQSHLKKCGGKYQ-ILAFRPTGWTHSNKLTRIADIIPQTKGNISIYGIPYSEHSSY 462
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
E+K FV+++ P+ IIP+VN S M
Sbjct: 463 LEMKRFVQWLKPQKIIPTVNVGTLKSRRTM 492
>gi|426366239|ref|XP_004050168.1| PREDICTED: DNA cross-link repair 1A protein [Gorilla gorilla gorilla]
Length = 1040
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 206/337 (61%), Gaps = 7/337 (2%)
Query: 376 KKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRS 434
KK +G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++
Sbjct: 685 KKIPESSNGEGSRKKTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKH 744
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE 494
F +YCS IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF
Sbjct: 745 FTF-PVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFY 803
Query: 495 PQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-A 553
NG +LHTGDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A
Sbjct: 804 LPNGTVILHTGDFRADPSM-EHSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTA 862
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
+A + NP L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E T
Sbjct: 863 FEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLIT 921
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQ 672
T+ S +H++PM + +FK L+ + G+++ I+AF PTGWT S K + +
Sbjct: 922 TDMCSSLVHLLPMMQI-NFKGLQSHLKKCRGKYNQILAFRPTGWTHSNKFTRIADVIPQT 980
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 981 KGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
>gi|40788960|dbj|BAA07646.2| KIAA0086 [Homo sapiens]
Length = 1044
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 699 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 757
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 758 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 817
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 818 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 876
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 877 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCSSLVHL 935
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 936 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 994
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 995 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1021
>gi|223278374|ref|NP_055696.3| DNA cross-link repair 1A protein [Homo sapiens]
gi|425871110|ref|NP_001258745.1| DNA cross-link repair 1A protein [Homo sapiens]
gi|311033461|sp|Q6PJP8.3|DCR1A_HUMAN RecName: Full=DNA cross-link repair 1A protein; AltName: Full=SNM1
homolog A; Short=hSNM1; Short=hSNM1A
gi|16753254|gb|AAH13124.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
gi|168274358|dbj|BAG09599.1| DNA cross-link repair 1A protein [synthetic construct]
Length = 1040
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 695 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 753
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 754 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 813
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 814 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 872
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 873 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCSSLVHL 931
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 932 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 990
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
>gi|47060293|gb|AAT09762.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
gi|119569874|gb|EAW49489.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a
[Homo sapiens]
gi|119569875|gb|EAW49490.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 1040
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 695 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 753
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 754 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 813
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 814 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 872
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 873 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCSSLVHL 931
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 932 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 990
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
>gi|38566205|gb|AAH62582.1| DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Homo sapiens]
Length = 1040
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 695 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 753
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 754 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 813
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 814 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 872
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 873 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCSSLVHL 931
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 932 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 990
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
>gi|297687406|ref|XP_002821207.1| PREDICTED: DNA cross-link repair 1A protein [Pongo abelii]
Length = 1039
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 228/386 (59%), Gaps = 18/386 (4%)
Query: 329 IVDGSSKPAANKLITDFFLGSITNVKKVSTPTNG--QSGSRKSFSGSDRKKHAAKDQSKG 386
+ +G+ + ++ L T+ S++ VK + +G Q G++K S+ G
Sbjct: 644 LQEGAYQKRSDHLNTESEAVSLSKVKVFTKSAHGGLQRGNKKIPESSN---------VGG 694
Query: 387 RKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS I
Sbjct: 695 PRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEI 753
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
T L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHTG
Sbjct: 754 TGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHTG 813
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTL 564
DFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP L
Sbjct: 814 DFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHAL 872
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
+ G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H++
Sbjct: 873 VVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSLITTDMCSSLVHLL 931
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPY 683
PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +PY
Sbjct: 932 PMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIPY 990
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVN 709
SEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 SEHSSYLEMKRFVQWLKPQKIIPTVN 1016
>gi|114632910|ref|XP_508045.2| PREDICTED: DNA cross-link repair 1A protein [Pan troglodytes]
gi|410337131|gb|JAA37512.1| DNA cross-link repair 1A [Pan troglodytes]
Length = 1040
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 695 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 753
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 754 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 813
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 814 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 872
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 873 LVVCGTYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIP-EINSLITTDMCSSLVHL 931
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 932 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 990
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
>gi|397510540|ref|XP_003825653.1| PREDICTED: DNA cross-link repair 1A protein [Pan paniscus]
Length = 1040
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 137/327 (41%), Positives = 203/327 (62%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 695 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 753
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 754 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 813
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 814 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 872
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 873 LVVCGTYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIP-EINSLITTDMCSSLVHL 931
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 932 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 990
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 YSEHSSYLEMKRFVQWLKPQKIIPTVN 1017
>gi|356560410|ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like [Glycine max]
Length = 505
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/370 (39%), Positives = 219/370 (59%), Gaps = 11/370 (2%)
Query: 348 GSITNVKKVSTPTNGQS---GSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFR 404
G ++ +K+ P N S + K F + + + R + P + +PGT F
Sbjct: 119 GGGSSERKIVKPENRCSIFPDTGKEFENAKSSRKRKGSCGENRVTRSCPFYKKMPGTMFT 178
Query: 405 VDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQ 462
VDAF+Y + G CS +FLTHFH DHY GL++ + HG IYCS +T RLV M + + +
Sbjct: 179 VDAFRYGCVEG-CSAYFLTHFHCDHYGGLSKKWSHGPIYCSPLTGRLVQMCLSVNPLYIH 237
Query: 463 VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC 522
L N++ I G+ VT LEANHCPG+ +I F NG+ LHTGDFR + M + +L
Sbjct: 238 PLEFNEEHVIDGVKVTLLEANHCPGAALIHFNLPNGQRYLHTGDFRACKLMQAYHLLVNQ 297
Query: 523 PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNPKTLFLIGSYTIGKERLFLEV 581
++ L LDTTYCNP Y FP +E V+ +V++ + +P+TL ++G+Y+IGKE ++L +
Sbjct: 298 RVNVLYLDTTYCNPKYRFPSKEEVLNYVVKITKNHLKIHPRTLVVVGAYSIGKECVYLAI 357
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
++ L KIY NA++ R+L+ + + TN + + +HV+PM +L + LK
Sbjct: 358 SKALGVKIYANASRRRILQAFGWPDLSDK-LCTNGNNTLLHVLPMSSL-RVETLKDYLKT 415
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPG--RRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
Y +F+ I+AF PTGWTFS+ + +G I Y VPYSEH SF+EL++FV+ +
Sbjct: 416 YKEQFTAILAFRPTGWTFSEKISNDLELIKPVSKGNITIYGVPYSEHSSFSELQDFVQVL 475
Query: 700 SPEHIIPSVN 709
P+ IIP+VN
Sbjct: 476 RPDKIIPTVN 485
>gi|301755506|ref|XP_002913597.1| PREDICTED: DNA cross-link repair 1A protein-like [Ailuropoda
melanoleuca]
gi|281347740|gb|EFB23324.1| hypothetical protein PANDA_001409 [Ailuropoda melanoleuca]
Length = 1049
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 136/323 (42%), Positives = 202/323 (62%), Gaps = 7/323 (2%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
+ P + +PGT F VDAF+Y L C+ +FLTHFH DHY GL+++F IYCS IT
Sbjct: 708 RTCPFYKKIPGTGFTVDAFQYGLVEGCTAYFLTHFHSDHYAGLSKNFTF-PIYCSEITGN 766
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
L+ K+ + + LP++ + + G+ V L+ANHCPG+++ILF NG +LHTGDFR
Sbjct: 767 LLRSKLHVQKQYVHPLPMDTECIVNGVKVVLLDANHCPGAVMILFYLPNGNVLLHTGDFR 826
Query: 509 FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLI 567
M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L +
Sbjct: 827 ADPTM-ERSRLAGQRVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFEAVTLNPRVLVVC 885
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ + + + TT+ S +H++PM
Sbjct: 886 GTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPELN-SFITTDMCSSLVHLLPMM 944
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYSEH 686
+ +FK L+ + G++ ++AF PTGWT S Q +G I Y +PYSEH
Sbjct: 945 QI-NFKALQSHLKKCGGKYDQVLAFRPTGWTHSNKLTSIADIIPQTKGNISIYGIPYSEH 1003
Query: 687 CSFTELKEFVKFVSPEHIIPSVN 709
S+ E+K FV+++ P+ IIP+VN
Sbjct: 1004 SSYLEIKRFVQWLKPQKIIPTVN 1026
>gi|1495267|emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 216/337 (64%), Gaps = 14/337 (4%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PGTPF VDAF+Y ++G CS +FLTHFH DHY GLT+++ HG IYCS +T+RL+
Sbjct: 146 PFYKKLPGTPFTVDAFRYGCVQG-CSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL 204
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ + + + L L+ + TI GI VT +EANHCPG+ +I F +G LHTGDFR S
Sbjct: 205 RLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRAS 264
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF---NPKTLFLI 567
++M + +L +H L LDTTYCNP Y FP +E V+ +V+ + F PKTL ++
Sbjct: 265 KQMQTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRI--TKDFLRKQPKTLIVV 322
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI-QWFTTNEHESHIHVMPM 626
GSY+IGKE ++L +A+ L KI+ NA++ R+L+ F +DI + +T+ + +HV+PM
Sbjct: 323 GSYSIGKECVYLAIAKALGVKIFANASRRRILQ--SFGWDDISKNLSTDGKATCLHVLPM 380
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYS 684
+L +RL Y ++ ++AF PTGWT+S+ G+ + +G I Y VPYS
Sbjct: 381 SSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYS 439
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVS 721
EH SFTEL+EFV+F+ P+ IIP+VNN + M S
Sbjct: 440 EHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
>gi|301092745|ref|XP_002997225.1| DNA cross-link repair protein, putative [Phytophthora infestans
T30-4]
gi|262111496|gb|EEY69548.1| DNA cross-link repair protein, putative [Phytophthora infestans
T30-4]
Length = 565
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/576 (31%), Positives = 279/576 (48%), Gaps = 68/576 (11%)
Query: 168 ESVRCPLCGIDISDLNEELRQAHTNNCLDK--------CENQAQDVVF----PKHERGPR 215
E +RC +C +D++ + R+AH N CLD C +QD+ + E R
Sbjct: 2 ELLRCLVCSMDMTPWSLADREAHLNACLDAASTVQRFDCPTCSQDLSHCDERRRTEHANR 61
Query: 216 LEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIG 275
++ +G + D E + + ++ + + D ++ + L G
Sbjct: 62 CLDRAEVSVGNAQGNGQDYDSESECAYVCKICGFDMS------EIDLMRRIRHVKLCG-- 113
Query: 276 VTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSK 335
G R + + E+ + + K + + S R +EAS ++ S+
Sbjct: 114 -QKFGVRPE---DMGEVDQAETIGRRLEKKGEAPDAFAIMMKSSTRKEEASAAAMERSN- 168
Query: 336 PAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTW 395
+ L+ ++ N +K P +RK+ R+ P +
Sbjct: 169 -VFDLLMRSSKTAAVLNARKRPVPFKF---TRKAIQ---------------RRRLLYPDF 209
Query: 396 CCVPGT--PFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
C+ GT PF VD F+Y + + S +FLTHFH DHY GLT++F G IYC+ ITARLV
Sbjct: 210 KCIQGTDPPFIVDGFQYACKENSSIYFLTHFHSDHYGGLTKNFDCGIIYCNEITARLVVQ 269
Query: 453 KIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
++G+ + + +N +AG+ VT ++ANHCPGS IILF ++GK LHTGDFRF+ +
Sbjct: 270 ELGVQSKYIHAVGMNTPVFVAGVQVTFMDANHCPGSAIILFRLKDGKTFLHTGDFRFNRK 329
Query: 513 MASMSVLQT-CP-----------------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAI 554
M LQ+ P + + LDTTYCNP Y FP Q+ I +E I
Sbjct: 330 MLEYHALQSHIPTGSETIDHNGKIVGLNRLDGVYLDTTYCNPKYTFPTQQVAIDHALELI 389
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
K L+L GSYTIGKERLF+E+AR +KK+ V+ K ++++ + ++++ TT
Sbjct: 390 DKHFKQDKVLYLFGSYTIGKERLFMEIARKFQKKVCVSKTKLKIIETFGWHSQEMKLLTT 449
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-- 672
+++HV+ M L L + + RF IVAF PTGWTFS +S
Sbjct: 450 VPTATNLHVVRMQDL-QMDNLIVLLAKNRLRFHRIVAFRPTGWTFSGKNPRSISTCCTDP 508
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
G I Y +PYSEH SF EL +FV+ V+P IIP+V
Sbjct: 509 SGKIYVYGIPYSEHSSFAELCDFVQVVNPVSIIPTV 544
>gi|15231597|ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein [Arabidopsis thaliana]
gi|11994302|dbj|BAB01732.1| unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis thaliana]
gi|28827378|gb|AAO50533.1| unknown protein [Arabidopsis thaliana]
gi|332643675|gb|AEE77196.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643677|gb|AEE77198.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 216/337 (64%), Gaps = 14/337 (4%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PGTPF VDAF+Y ++G CS +FLTHFH DHY GLT+++ HG IYCS +T+RL+
Sbjct: 146 PFYKKLPGTPFTVDAFRYGCVQG-CSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL 204
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ + + + L L+ + TI GI VT +EANHCPG+ +I F +G LHTGDFR S
Sbjct: 205 RLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRAS 264
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF---NPKTLFLI 567
++M + +L +H L LDTTYCNP Y FP +E V+ +V+ + F PKTL ++
Sbjct: 265 KQMQTHPLLFNQRVHVLYLDTTYCNPRYKFPSKEDVLSYVVRI--TKDFLRKQPKTLIVV 322
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI-QWFTTNEHESHIHVMPM 626
GSY+IGKE ++L +A+ L KI+ NA++ R+L+ F +DI + +T+ + +HV+PM
Sbjct: 323 GSYSIGKECVYLAIAKALGVKIFANASRRRILQ--SFGWDDISKNLSTDGKATCLHVLPM 380
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYS 684
+L +RL Y ++ ++AF PTGWT+S+ G+ + +G I Y VPYS
Sbjct: 381 SSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYS 439
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVS 721
EH SFTEL+EFV+F+ P+ IIP+VNN + M S
Sbjct: 440 EHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
>gi|395828054|ref|XP_003787201.1| PREDICTED: DNA cross-link repair 1A protein [Otolemur garnettii]
Length = 1042
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 139/335 (41%), Positives = 204/335 (60%), Gaps = 7/335 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS IT
Sbjct: 699 RKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSEIT 757
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + + G+ V L+ANHCPG+++ILF NG +LHTGD
Sbjct: 758 GNLLKNKLHVQEQYIHPLPMDTECVVNGVKVVLLDANHCPGAVMILFYLPNGTIILHTGD 817
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP L
Sbjct: 818 FRADPSM-ERSLLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPCALV 876
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H++P
Sbjct: 877 VCGTYSIGKEKVFLAIADVLCSKVAMSQEKYKTLRCLNIP-EINSLITTDMCSSLVHLLP 935
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVPYS 684
M + +FK L+ + G++ I+AF PTGWT S K + +G I Y +PYS
Sbjct: 936 MMQI-NFKDLQSHLKKCGGKYDQILAFRPTGWTHSNKLTSIADVIPKTKGNISIYGIPYS 994
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
EH S+ E+K FV+++ P+ IIP+VN S + M
Sbjct: 995 EHSSYLEMKRFVQWLKPQKIIPTVNVGNFKSRSTM 1029
>gi|351706821|gb|EHB09740.1| DNA cross-link repair 1A protein [Heterocephalus glaber]
Length = 1039
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 137/325 (42%), Positives = 199/325 (61%), Gaps = 7/325 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ + P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL+++ +YCS IT
Sbjct: 696 RQRTCPFYKKIPGTGFTVDAFQYGEVEGCTAYFLTHFHSDHYAGLSKNSTF-PVYCSEIT 754
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ K + G+ V L+ANHCPG+ ++LF NG VLHTGD
Sbjct: 755 GNLLKSKLHVQEQYIHPLPMDTKCIVNGVKVILLDANHCPGAAMVLFYLPNGTVVLHTGD 814
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
FR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+ L
Sbjct: 815 FRADPSM-ERSLLAGQKVHTLYLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPRALI 873
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y IGKE++FL +A VL K+ ++ K+ L+CL+ S E TT+ S +H++P
Sbjct: 874 ICGTYCIGKEKVFLAIADVLGSKVGMSKEKYETLRCLNIS-EINSLITTDMCNSLVHLLP 932
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPYS 684
M + +FK L+ +Y ++ I+AF PTGWT S Q +G I Y +PYS
Sbjct: 933 MMQI-NFKSLQSHLKKYGEKYDQILAFRPTGWTHSNKLTCIADVTPQTKGNISIYGIPYS 991
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVN 709
EH S+ E+K FV+++ P+ IIP+VN
Sbjct: 992 EHSSYLEMKRFVQWLKPQKIIPTVN 1016
>gi|343959632|dbj|BAK63673.1| DNA cross-link repair 1A protein [Pan troglodytes]
Length = 576
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/337 (41%), Positives = 206/337 (61%), Gaps = 7/337 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 231 GSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 289
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 290 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 349
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 350 GDFRADPSM-ERSLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 408
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 409 LVVCGTYSIGKEKVFLAIADVLGSKVGMSREKYKTLQCLNIP-EINSLITTDMCSSLVHL 467
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 468 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 526
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
YSEH S+ E+K FV+++ P+ IIP+VN S + M
Sbjct: 527 YSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTM 563
>gi|76655155|ref|XP_580486.2| PREDICTED: DNA cross-link repair 1A protein [Bos taurus]
gi|297490989|ref|XP_002698556.1| PREDICTED: DNA cross-link repair 1A protein [Bos taurus]
gi|296472627|tpg|DAA14742.1| TPA: Snm1-like [Bos taurus]
Length = 1051
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/336 (41%), Positives = 204/336 (60%), Gaps = 9/336 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL+++F IYCS I
Sbjct: 708 RKRTCPFYKKIPGTGFTVDAFQYGWVEG-CTAYFLTHFHSDHYAGLSKNFTF-PIYCSKI 765
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
T L+ K+ + + LP + + + GI V L+ANHCPG+++ILF NG +LHTG
Sbjct: 766 TGNLLKSKLHVQEQYIHPLPTDTECIVNGIKVILLDANHCPGAVMILFCLPNGHVILHTG 825
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTL 564
DFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A + + NP+ L
Sbjct: 826 DFRADPSM-ERSLLGCHKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPRAL 884
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
+ G+Y+IGKE++FL +A VL K+ ++ K+ L+C + E + TT+ S +H++
Sbjct: 885 VVCGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIP-EVSSFITTDMCNSLVHLL 943
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPY 683
PM + +FK L++ + G+++ I+AF PTGWT S Q +G I Y +PY
Sbjct: 944 PMMQI-NFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADIIPQTKGNISIYGIPY 1002
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
SEH S+ E+K FV+++ P+ IIP+VN S M
Sbjct: 1003 SEHSSYLEMKRFVQWLKPQKIIPTVNVGSLKSRRTM 1038
>gi|328876594|gb|EGG24957.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium fasciculatum]
Length = 922
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 135/316 (42%), Positives = 195/316 (61%), Gaps = 10/316 (3%)
Query: 394 TWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK 453
++ + GT F VD F+Y + +H+FLTHFH DHY GLT++F G +YC+ T +LV+ K
Sbjct: 290 SFKVIHGTKFLVDGFQYKSKEYTHYFLTHFHSDHYVGLTKTFSFGNVYCTEETGKLVHSK 349
Query: 454 IGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+G+ + ++ +P N+ TI G+ V L+ANHCPGS +ILF N + LHTGDFR+ M
Sbjct: 350 LGVQPNFIKAMPWNRFITIEGVRVAMLDANHCPGSAMILFH-VNNEYSLHTGDFRYHHRM 408
Query: 514 ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIG 573
+L+ I L LD T+C+P Y FP Q+ VIQ V++ IQ E+ + +T+FL G+YTIG
Sbjct: 409 KEYPLLKDIAISRLYLDNTFCDPTYVFPPQQEVIQEVVKIIQKEN-DGRTVFLFGTYTIG 467
Query: 574 KERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
KER+ +EV++ RKKI V+ K +++ CLD D FTT+E + H +PM TL F
Sbjct: 468 KERILMEVSKNQRKKICVSQDKKQIIACLDL---DQTMFTTDETITPFHAVPMGTLR-FD 523
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELK 693
L+ R+ +VAF PTGWT + KK +R+ G + Y V YSEH S+ EL
Sbjct: 524 SLRGRLEALKPRYGRVVAFRPTGWT--QSKKSITHQRY--GAVTLYSVAYSEHSSYNELL 579
Query: 694 EFVKFVSPEHIIPSVN 709
+ + P IIP+V+
Sbjct: 580 QCIDHFRPTEIIPTVD 595
>gi|297814896|ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata]
gi|297321169|gb|EFH51590.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata]
Length = 483
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 154/373 (41%), Positives = 229/373 (61%), Gaps = 18/373 (4%)
Query: 357 STPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGD 414
++P + S S G R+ + + S + P + +PGTPF VDAF+Y ++G
Sbjct: 113 TSPASNSSKKTTSALGKRRRDSSFGNDSP----RPCPFYKKLPGTPFTVDAFRYGCVQG- 167
Query: 415 CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG 474
CS +FLTHFH DHY GLT+++ HG IYCS +T+RL+ + + + + L L+ + TI G
Sbjct: 168 CSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLLRLSLSVDPSFIHPLELDVEYTING 227
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
I VT +EANHCPG+ +I F +G LHTGDFR S++M + +L +H L LDTTYC
Sbjct: 228 IKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRASKKMQTHPLLFNQRVHVLYLDTTYC 287
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESF---NPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
NP Y FP +E V+ +V+ + F PKTL ++GSY+IGKE ++L +A+ L KI+
Sbjct: 288 NPRYKFPSKEDVLSYVVRITK--DFLRKQPKTLIVVGSYSIGKECVYLAIAKALGVKIFA 345
Query: 592 NAAKFRVLKCLDFSKEDI-QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
NA++ R+L+ F +DI + +T+ + +HV+PM +L +RL Y ++ ++
Sbjct: 346 NASRRRILQ--SFGWDDISKNLSTDGKATCLHVLPMSSL-KVERLDEHLKVYREQYGAVL 402
Query: 651 AFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
AF PTGWT+S+ G+ + +G I Y VPYSEH SFTEL+EFV+F+ P+ IIP+V
Sbjct: 403 AFRPTGWTYSEKIGEHLDLIKPTCKGKITIYGVPYSEHSSFTELREFVQFLRPDKIIPTV 462
Query: 709 NNDGRDSANAMVS 721
NN + M S
Sbjct: 463 NNANAGTREKMQS 475
>gi|440911917|gb|ELR61536.1| DNA cross-link repair 1A protein [Bos grunniens mutus]
Length = 1051
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 254/470 (54%), Gaps = 29/470 (6%)
Query: 264 QWLTEEDLIGIGV-TALGP--------RKKILHTLCEIKKEYSRAVESNKDAHVSNDGSS 314
+ L E L G+ TA+ P ++K +L +++ E ES +S+ GS
Sbjct: 584 KLLEESSLEGMNFNTAVSPNEKRSQQRKRKAEKSLSDLELEAKNLSESQPSVELSDKGSQ 643
Query: 315 SYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSD 374
H +R K++ + G K + T + N+ K T G + +
Sbjct: 644 --HQKKRLKKSDSLQEGGHQKNPGHLKKT---VPRTVNLSKDKTFIKSAHGRVQR----E 694
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLT 432
K + + + + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL+
Sbjct: 695 NTKISESSNAGELRKRTCPFYKKIPGTGFTVDAFQYGWVEG-CTAYFLTHFHSDHYAGLS 753
Query: 433 RSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIIL 492
++F IYCS IT L+ K+ + + LP + + + GI V L+ANHCPG+++IL
Sbjct: 754 KNFTF-PIYCSKITGNLLKSKLHVQEQYIHPLPTDTECIVNGIKVILLDANHCPGAVMIL 812
Query: 493 FEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
F NG +LHTGDFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I
Sbjct: 813 FCLPNGHVILHTGDFRADPSM-ERSLLGCHKVHTLYLDTTYCSPEYSFPSQQEVIQFAIN 871
Query: 553 -AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
A + + NP+ L + G+Y+IGKE++FL +A VL K+ ++ K+ L+C FS ++
Sbjct: 872 TAFETVTLNPRALVVCGTYSIGKEKIFLAIADVLGSKVGMSREKYNTLQC--FSIPEVSS 929
Query: 612 F-TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR 670
F TT+ S +H++PM + +FK L++ + G+++ I+AF PTGWT S
Sbjct: 930 FITTDMCNSLVHLLPMMQI-NFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADII 988
Query: 671 WQ-QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
Q +G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN S M
Sbjct: 989 PQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGSLKSRRTM 1038
>gi|332212859|ref|XP_003255538.1| PREDICTED: DNA cross-link repair 1A protein [Nomascus leucogenys]
Length = 1040
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 136/327 (41%), Positives = 202/327 (61%), Gaps = 7/327 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL 444
G + K P + + GT F VDAF+Y + C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 695 GSRKKTCPFYKKITGTSFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKHFTF-PVYCSE 753
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF NG +LHT
Sbjct: 754 ITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFYLPNGTVILHT 813
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A +A + NP
Sbjct: 814 GDFRADPSM-ERSLLADQKVHVLYLDTTYCSPEYTFPSQQEVIRFAINTAFEAVTLNPHA 872
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 873 LVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EINSVITTDMCSSLVHL 931
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQQGTIIRYEVP 682
+PM + +FK L+ + G+++ I+AF PTGWT S K + + +G I Y +P
Sbjct: 932 LPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQTKGNISIYGIP 990
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 991 YSEHSSYLEMKHFVQWLKPQKIIPTVN 1017
>gi|426253134|ref|XP_004020255.1| PREDICTED: DNA cross-link repair 1A protein [Ovis aries]
Length = 1051
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/326 (42%), Positives = 202/326 (61%), Gaps = 9/326 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL+++ IYCS I
Sbjct: 708 RKRTCPFYKKIPGTGFTVDAFQYGWVEG-CTAYFLTHFHSDHYAGLSKNCMF-PIYCSEI 765
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
T L+ K+ + + LP++ + + GI V LEANHCPG+++ILF NG +LHTG
Sbjct: 766 TGNLLKSKLHVQEQYIHPLPIDTECIVNGIKVILLEANHCPGAVMILFYLPNGHVILHTG 825
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTL 564
DFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF I A + + NP+ L
Sbjct: 826 DFRADPSM-ERSLLACQKVHTLYLDTTYCSPEYSFPSQQEVIQFAINTAFETVTLNPQAL 884
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
+ G+Y+IGKE++FL +A VL K+ ++ K+ L+C + E TT+ +S +H++
Sbjct: 885 VVCGTYSIGKEKIFLAIADVLGSKVGMSKEKYNTLQCFNIP-EVSSLITTDMCKSLVHLL 943
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVPY 683
PM + +FK L++ + G+++ I+AF PTGWT S Q +G I Y +PY
Sbjct: 944 PMMQI-NFKGLQNHLKKCGGKYNQILAFRPTGWTHSNKLTSLADIIPQTKGNISIYGIPY 1002
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVN 709
SEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 1003 SEHSSYLEMKRFVQWLKPQKIIPTVN 1028
>gi|224131352|ref|XP_002321063.1| predicted protein [Populus trichocarpa]
gi|222861836|gb|EEE99378.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/350 (39%), Positives = 211/350 (60%), Gaps = 8/350 (2%)
Query: 379 AAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
AA K + + P + +P T F VDAF+Y + G CS +FLTHFH DHY GLT+ +
Sbjct: 30 AASSSPKHNRPRACPFYKRIPDTGFSVDAFRYGPIPG-CSAYFLTHFHYDHYGGLTKGWS 88
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQ 496
HG IYC+ +TARL+ + + + + L L+ + I G+ VT LEANHCPG+ ++ F
Sbjct: 89 HGPIYCTPLTARLLTICLSLNSLYIHPLELDTEYVIQGVKVTLLEANHCPGAALLHFRLP 148
Query: 497 NGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
G LHTGDFR S+ M + +L ++ L LDTTYCNP Y FP +E V+ +V+ ++
Sbjct: 149 TGLCYLHTGDFRASKLMQAHPLLANNRVNVLYLDTTYCNPKYKFPSKEDVLSYVVRVTKS 208
Query: 557 E-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
PKTL ++G+Y+IGKE ++L +++ L KIY N ++ R+L+ + T
Sbjct: 209 SLKKQPKTLVVVGAYSIGKESVYLAISKALGVKIYANNSRRRILQSFGWPDLSTN-LCTK 267
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG--RRWQQ 673
++ +HV+P+ +L ++ LK + +++ ++AF PTGWT+S+G + R +
Sbjct: 268 AIDTCLHVLPISSL-RYETLKDYLKNHVNQYAAVLAFRPTGWTYSEGLGRELDLIRPSTR 326
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
G I Y VPYSEH SFTEL++FV+F+ P+ IIP+VN D+ + M S
Sbjct: 327 GNITIYGVPYSEHSSFTELRDFVEFLKPDKIIPTVNVGNPDNRDKMQSYF 376
>gi|222423539|dbj|BAH19739.1| AT3G26680 [Arabidopsis thaliana]
Length = 484
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/337 (43%), Positives = 215/337 (63%), Gaps = 14/337 (4%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PGTPF VDAF+Y ++G CS +FLTHFH DHY GLT+++ HG IYCS +T+RL+
Sbjct: 146 PFYKKLPGTPFTVDAFRYGCVQG-CSAYFLTHFHADHYIGLTKAWSHGPIYCSSLTSRLL 204
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ + + + L L+ + TI GI VT +EANHCPG+ +I F +G LHTGDFR S
Sbjct: 205 RLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHTGDFRAS 264
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF---NPKTLFLI 567
++M + +L + L LDTTYCNP Y FP +E V+ +V+ + F PKTL ++
Sbjct: 265 KQMQTHPLLFNQRVRVLYLDTTYCNPRYKFPSKEDVLSYVVRI--TKDFLRKQPKTLIVV 322
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI-QWFTTNEHESHIHVMPM 626
GSY+IGKE ++L +A+ L KI+ NA++ R+L+ F +DI + +T+ + +HV+PM
Sbjct: 323 GSYSIGKECVYLAIAKALGVKIFANASRRRILQ--SFGWDDISKNLSTDGKATCLHVLPM 380
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYS 684
+L +RL Y ++ ++AF PTGWT+S+ G+ + +G I Y VPYS
Sbjct: 381 SSL-KVERLDEHLKIYREQYGAVLAFRPTGWTYSEKIGEHLDLIKPTSRGKITIYGVPYS 439
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVS 721
EH SFTEL+EFV+F+ P+ IIP+VNN + M S
Sbjct: 440 EHSSFTELREFVQFLRPDKIIPTVNNGNAGTREKMQS 476
>gi|320168273|gb|EFW45172.1| SNM1 [Capsaspora owczarzaki ATCC 30864]
Length = 864
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/338 (39%), Positives = 201/338 (59%), Gaps = 7/338 (2%)
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTR 433
R + +A SK + P + +P T F VDAF++ R C+ +FLTHFH DHY GL++
Sbjct: 500 RPRFSAAGASKAVR--PCPFYKRMPDTTFVVDAFRFGRIAGCTGYFLTHFHSDHYGGLSK 557
Query: 434 SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF 493
+ HG IYCS TA L +G+ D L LP++++ T+ G+ VT ++ANHCPGS +I F
Sbjct: 558 GWRHGPIYCSEATANLAVHVLGVADDMLHRLPMDREVTVDGVGVTLIDANHCPGSCLIKF 617
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEA 553
+G+ LHTGDFR M + L C L LDTTYC+P Y FP Q+ V+ F
Sbjct: 618 VLPDGRVYLHTGDFRADPAMLAHQALAQCRFAMLYLDTTYCDPRYTFPSQQEVVSFCARI 677
Query: 554 IQAESF-NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
+A N + L ++G+Y IGKE++F +A+ L K V+ K R+L+CL+ +KE
Sbjct: 678 SRAMVVRNSRLLVVVGTYQIGKEKVFQSIAKALGVKAAVDPHKLRILQCLN-NKELSDIL 736
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
T +++ + +H++P+++L++ ++SN + ++ ++AF PTGWTFS + Q
Sbjct: 737 TLDKNSTRLHILPLFSLSAKSLQAYLSN-FRPHYNAVLAFRPTGWTFSSKLVSVADIQPQ 795
Query: 673 -QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
G I Y VPYSEH SF+EL EFV + +IP+VN
Sbjct: 796 ITGNICMYGVPYSEHSSFSELGEFVAALKATKVIPTVN 833
>gi|7595835|gb|AAF64472.1|AF241240_1 SNM1 protein [Mus musculus]
Length = 1023
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/338 (41%), Positives = 205/338 (60%), Gaps = 9/338 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 678 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 735
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT L+ K+ + ++ LP++ + + + V ++ANHCPG+ +ILF+ NG +LH
Sbjct: 736 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVFVDANHCPGATMILFQLPNGAVILH 795
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 796 TGDFRADPSM-ERSRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPR 854
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L + G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ +S +H
Sbjct: 855 ALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCDSLVH 913
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEV 681
++PM + +FK L+ + G++ I+AF PTGWT S + Q +G I Y +
Sbjct: 914 LLPMMQI-NFKGLQSHLKKCGGKYDQILAFRPTGWTHSNNITSTADIIPQTRGNISIYGI 972
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH S+ E+K FV+++ P+ IIP+VN S N M
Sbjct: 973 PYSEHSSYLEMKRFVQWLKPQKIIPTVNVGSFRSRNTM 1010
>gi|325185791|emb|CCA20296.1| DNA crosslink repair protein putative [Albugo laibachii Nc14]
Length = 662
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 152/408 (37%), Positives = 217/408 (53%), Gaps = 20/408 (4%)
Query: 332 GSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKD 391
G + A N D + +K++S Q +S S +K + +K
Sbjct: 251 GIKRAAQNAF--DIMMQGSQALKRLSKFPPAQFPGMRSIGKSWKKPKLDSENAKRVPELK 308
Query: 392 IPTWCCVPGTP--FRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
P + + GT F VD F++ D S +FLTHFH DHY GLT+ F G IYCS ITA
Sbjct: 309 CPEYKIICGTKPRFIVDGFRFASKDLSSVYFLTHFHSDHYIGLTKKFDAGTIYCSQITAN 368
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
LV MK+ + + ++ +N I G++V L+ANHCPG+ IILF +N + LHTGDFR
Sbjct: 369 LVMMKLRVDAKYICIVAMNTPIFIHGVEVIFLDANHCPGACIILFRQKNEMSFLHTGDFR 428
Query: 509 FSEEMASMSVL-----------QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE 557
F M L + + + LDTTY +DF QE VI+ V+ ++
Sbjct: 429 FHPRMLEYPALRPFVDQESTQNEMQRLSGVYLDTTYAKSKFDFAPQEIVIKHVVGLMEKH 488
Query: 558 SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEH 617
+ +++ G+YTIGKER+F+EVA+ KK+ V+ KFRVL C + KED+ + TT+
Sbjct: 489 YSTQRQMYIFGTYTIGKERVFMEVAKHFGKKMCVSKEKFRVLSCYGWDKEDMDFITTDSG 548
Query: 618 ESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT-- 675
++ VMPM +L RL + Y+ RF +VAF PTGWTF +G S + + +
Sbjct: 549 DTCFFVMPMHSL-RMDRLSGLLRSYSNRFDRVVAFRPTGWTF-QGANASLSKLQKDASDR 606
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
Y +PYSEH SF+EL +FVK P+ IIP+VN R V L+
Sbjct: 607 FRVYGIPYSEHSSFSELCQFVKAFKPKTIIPTVNCRSRHQMTEQVDLI 654
>gi|428698111|pdb|4B87|A Chain A, Crystal Structure Of Human Dna Cross-Link Repair 1a
Length = 367
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 140/347 (40%), Positives = 209/347 (60%), Gaps = 7/347 (2%)
Query: 376 KKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRS 434
KK G + K P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL++
Sbjct: 12 KKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKH 71
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE 494
F +YCS IT L+ K+ + + LPL+ + + G+ V L+ANHCPG+++ILF
Sbjct: 72 FTF-PVYCSEITGNLLKNKLHVQEQYIHPLPLDTECIVNGVKVVLLDANHCPGAVMILFY 130
Query: 495 PQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-A 553
NG +LHTGDFR M S+L +H L LDTTYC+P Y FP Q+ VI+F I A
Sbjct: 131 LPNGTVILHTGDFRADPSMER-SLLADQKVHMLYLDTTYCSPEYTFPSQQEVIRFAINTA 189
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
+A + NP L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ + + T
Sbjct: 190 FEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIPEIN-SLIT 248
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSPGRRWQ 672
T+ S +H++PM + +FK L+ + G+++ I+AF PTGWT S K + +
Sbjct: 249 TDMCSSLVHLLPMMQI-NFKGLQSHLKKCGGKYNQILAFRPTGWTHSNKFTRIADVIPQT 307
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+G I Y +PYSEH S+ E+K FV+++ P+ IIP+VN S + M
Sbjct: 308 KGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRSTM 354
>gi|348687557|gb|EGZ27371.1| hypothetical protein PHYSODRAFT_472505 [Phytophthora sojae]
Length = 569
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 139/347 (40%), Positives = 194/347 (55%), Gaps = 24/347 (6%)
Query: 387 RKHKDIPTWCCVPGT--PFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
R+ P + C+ GT PF VD F+Y + + S +FLTHFH DHY GL + F G IYC+
Sbjct: 215 RRRLLYPEFKCIRGTNPPFIVDGFQYACKQNSSIYFLTHFHSDHYGGLDKHFDCGIIYCN 274
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
ITA+LV ++G+ + + +N + + VT ++ANHCPGS IILF ++GK LH
Sbjct: 275 EITAKLVVQELGVLSKYVHPVGMNTPVLVGDVQVTFMDANHCPGSAIILFRLKDGKTYLH 334
Query: 504 TGDFRFSEEMASMSVLQ------------------TCPIHTLILDTTYCNPLYDFPKQEA 545
TGDFRF +M LQ + + LDTTYC+P Y FP Q+
Sbjct: 335 TGDFRFHRKMLDYHALQPHIATGDEKIDHNGKIVGLSRLDGVYLDTTYCDPKYTFPTQQV 394
Query: 546 VIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
+ +E + K L+L GSYTIGKERLF+EVAR +KK+ V+ AK ++++ +
Sbjct: 395 AVNHALELMDKHFKQEKVLYLFGSYTIGKERLFMEVARKFQKKVCVSKAKLKIIETFGWP 454
Query: 606 KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK 665
+D+Q TT +++HV+ M L L + ++ RF IVAF PTGWTFS +
Sbjct: 455 AKDMQLLTTEPGATNLHVVRMQDL-QMDNLTVLLAKHRLRFRRIVAFRPTGWTFSSKNPR 513
Query: 666 SPGRRWQ--QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
S G I Y +PYSEH SF EL +FV+ V+P IIP+V
Sbjct: 514 SISTCCTDPSGKIHVYGIPYSEHSSFAELCDFVQVVNPHAIIPTVRQ 560
>gi|328769438|gb|EGF79482.1| hypothetical protein BATDEDRAFT_1998, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 346
Score = 244 bits (622), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 144/336 (42%), Positives = 196/336 (58%), Gaps = 27/336 (8%)
Query: 401 TPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
T F VDAF Y + C+ +FLTHFH DHY GL +SF+ G IYCS ITA LV ++G+
Sbjct: 12 TSFTVDAFCYGVIPGCTAYFLTHFHSDHYGGLKKSFNSGPIYCSHITANLVAQQLGVDRS 71
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE------PQNGKAVLHTGDFRFSEEM 513
L +PLN +T I GI VT ++ANHCPGS+IILFE QN + VLHTGDFR
Sbjct: 72 MLHTIPLNTRTEIQGIQVTFIDANHCPGSVIILFEIPSVDAMQNNRNVLHTGDFRVHSSH 131
Query: 514 ASMSVLQTCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSY 570
+ + P+ L LDTTYCNP Y FP Q+AVI ++ K L ++G+Y
Sbjct: 132 FTHPSFLSKPLIRLDEIYLDTTYCNPKYIFPLQDAVIASILRPPLC-----KILVVVGTY 186
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
TIGKE++FL +++ + KIY +A K RVL CL+ D + + E+++H+ M L
Sbjct: 187 TIGKEKVFLAMSKAISSKIYADATKRRVLACLEDPDLD-RLVVSQPEEANVHLCTMMQLN 245
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR--------RWQQGTIIRYEVP 682
L+ M ++Y GRF+ I+A PTGWTF K KSP + RW I +P
Sbjct: 246 K-TSLEGMLDKYKGRFTSIIAVRPTGWTFQ--KLKSPSQFSIASLKPRWLSPNITLIPLP 302
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANA 718
YSEH SF ELK FV+ ++ + +IP+V + +A
Sbjct: 303 YSEHSSFEELKCFVQKMNVDKVIPTVGMGSATTRHA 338
>gi|340369565|ref|XP_003383318.1| PREDICTED: DNA cross-link repair 1A protein-like [Amphimedon
queenslandica]
Length = 556
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 133/318 (41%), Positives = 190/318 (59%), Gaps = 19/318 (5%)
Query: 398 VPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
+P T VDAF Y + G C+ +FLTHFH DHY GL F H IYCS +T L+ ++
Sbjct: 212 IPDTSITVDAFSYGSING-CTSYFLTHFHSDHYAGLNSRFAHD-IYCSKVTGNLIIQELK 269
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ D + LPL ++ I G+ VT L+ANHCPGS+++LF+ +GK +LHTGDFR S M
Sbjct: 270 VKSDIVHPLPLKEEKLINGVQVTLLDANHCPGSVLLLFKLPSGKVILHTGDFRLSHSMID 329
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF-NPKTLFLIGSYTIGK 574
+ T PI TL LDTTYC+ YDFP Q+ VI FV+ + +P TL + G+YTIGK
Sbjct: 330 HNFFLTTPIDTLFLDTTYCSARYDFPPQDDVISFVVNIVLERMVKDPDTLIVCGAYTIGK 389
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE---SHIHVMPMWTLAS 631
E++F + YV+ ++++L+CL+ SKE + N H S IHVM + + +
Sbjct: 390 EKIFTGC------QCYVSKERYKILQCLE-SKEIMS--VVNCHSPLASPIHVMSLNKM-N 439
Query: 632 FKRLKHMSNQYAGRFSLIVAFSPTGWTF-SKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
+ L Y+ ++ I+AF PTGWT +K R +G + Y VPYSEH SF+
Sbjct: 440 VEELTLYLRHYSTHYTSILAFKPTGWTATTKHNSLQDIRPVVRGVVTMYGVPYSEHSSFS 499
Query: 691 ELKEFVKFVSPEHIIPSV 708
EL+ FV+ +SP+ +I +V
Sbjct: 500 ELRTFVQSLSPQRVISTV 517
>gi|384246117|gb|EIE19608.1| DRMBL-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 319
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 133/320 (41%), Positives = 185/320 (57%), Gaps = 14/320 (4%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
VP T F VD F++ C H++L+H+H DH GLT SF G IYCS +TA L+ + I
Sbjct: 1 VPNTRFMVDGFRFQSSRCKHYWLSHYHSDHTTGLTTSFSSGTIYCSAVTANLLVKDMHIN 60
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE--PQNG-----KAVLHTGDFRFS 510
+Q LPLN + GI+VT ++ANHCPG+++ LF+ P G + +LHTGD R+
Sbjct: 61 PSCIQPLPLNIPLLVDGINVTLIDANHCPGAVLFLFKTPPPPGSEFSEQVILHTGDMRWH 120
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAES-FNPKTLFLIGS 569
M L+ I L LDTTY +P + FP QE I ++ ++ E+ P TLF++GS
Sbjct: 121 PRMGRHPALKNQRIDMLFLDTTYASPKHVFPCQEDAIADIVRVMKQEAKARPGTLFIMGS 180
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
Y IGKER +L A+ L K++VNA K RVL+ L + D+ T + + IHV M L
Sbjct: 181 YRIGKERAYLGAAKALGWKVHVNADKLRVLRLLGLPENDMALLTRDAAAARIHVSFMGKL 240
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
+ L AG ++ +VAF PTGW+F K RR +G + Y VPYSEH SF
Sbjct: 241 LTPDALT--DRIRAGPWTHVVAFRPTGWSFQKSGLSC--RR--EGDVAIYGVPYSEHSSF 294
Query: 690 TELKEFVKFVSPEHIIPSVN 709
EL++ VK + P I+P+VN
Sbjct: 295 AELRDCVKTLRPRRIVPTVN 314
>gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis]
Length = 1360
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/331 (36%), Positives = 195/331 (58%), Gaps = 24/331 (7%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+P T F +DAF++ + +FLTHFH DHY GL+ ++ G I+CS ITA LV + +P
Sbjct: 51 IPKTRFLIDAFRFSTA-AAAYFLTHFHSDHYSGLSSNWSQGMIFCSQITANLVTRILNVP 109
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNG---KAVLHTGDFRFSEEMA 514
+ LPLN I G ++T ++ANHCPG++ +LF+ ++ + +HTGDFR+S EM
Sbjct: 110 SQFVYPLPLNDTVIIDGSEITLIDANHCPGAVQLLFKVRSSGTFEMYVHTGDFRYSREMK 169
Query: 515 SMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA-----ESFNPKTLFLIG 568
+ +L+ + LDTTYCNP + FPKQ+ I +V+ I+ ++ + + LFL+
Sbjct: 170 EVGILRDFVGCDAVFLDTTYCNPKFVFPKQQESIDYVVSVIERIGGDFQAMSKRVLFLVA 229
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
+Y +GKER+ +E+A+ R+K++V+ K VL+ L + + + FT +E +S +HV+
Sbjct: 230 TYVVGKERILIEIAKRCRRKVHVDRRKMEVLRVLGYGESGV--FTEDEGQSDVHVVGWNV 287
Query: 629 LA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE 680
L +F +K + + +S IV F PTGWT+ K R I +
Sbjct: 288 LGETWPYFRPNFANMKEIMVERG--YSRIVGFVPTGWTYEVKHNKFSVRSKDSFEI--HL 343
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
VPYSEH ++ EL+E+VKF+ P+ +IP+V D
Sbjct: 344 VPYSEHSNYDELREYVKFLRPKRVIPTVGVD 374
>gi|330805557|ref|XP_003290747.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum]
gi|325079097|gb|EGC32714.1| hypothetical protein DICPUDRAFT_37896 [Dictyostelium purpureum]
Length = 341
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 129/323 (39%), Positives = 190/323 (58%), Gaps = 12/323 (3%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
P++ + GT F VD F+Y D H+FLTHFH DHY G+T+++ G IYC+ T RLV+
Sbjct: 1 PSYKVLHGTKFLVDGFQYKSEDYKHYFLTHFHSDHYTGITKTWAFGNIYCTEETGRLVSH 60
Query: 453 KIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQ--NGKA--VLHTGDFR 508
K+G+ ++ + N+ + G+ VT L+ANHCPGS I+LFE + NG+ +LHTGDFR
Sbjct: 61 KLGVDKKYIKGISFNKTFEVEGVKVTFLDANHCPGSAIVLFEVKMPNGEIENILHTGDFR 120
Query: 509 FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ M L+ I L LD T+CNP Y FP Q +I+ V + ++ E+ N KTLFL G
Sbjct: 121 YHPSMKQYPHLEGKEISKLYLDNTFCNPEYTFPPQHEIIKQVKDIVRKEN-NGKTLFLFG 179
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
+Y IGKE++ LEV++ K I V KF +L CLD D FT + + + M
Sbjct: 180 TYVIGKEKILLEVSKQEGKPIGVTKEKFEILNCLD--SIDQTKFTLDLTCTPFRAVSMGL 237
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCS 688
L F+ + ++ + G+++ ++ F PTGW+ SK R G + Y V YSEH S
Sbjct: 238 LG-FQSMMNLLEESNGKYTKVIGFRPTGWSQSKKSITYQNR----GPTVFYSVAYSEHSS 292
Query: 689 FTELKEFVKFVSPEHIIPSVNND 711
F EL++ + + P+ IIP+V+ D
Sbjct: 293 FNELRDCIDQLRPKEIIPTVDCD 315
>gi|321476964|gb|EFX87923.1| hypothetical protein DAPPUDRAFT_41973 [Daphnia pulex]
Length = 350
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 128/324 (39%), Positives = 189/324 (58%), Gaps = 11/324 (3%)
Query: 393 PTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + +PGT F +DAF Y S +FL+H+H DHY+GL + +YCS +TA L+N
Sbjct: 7 PFYKRIPGTGFAIDAFSYGNVAGVSSYFLSHYHYDHYRGLGKWLDK-PLYCSQVTANLIN 65
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
+KI + ++VLPLN+ I I+V ++ANHCPGS++ LF GK VLH GDFR
Sbjct: 66 LKIKLKPGIVRVLPLNESRVIESIEVILIDANHCPGSVMFLFRFPTGKVVLHVGDFRAHP 125
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI-GSY 570
M + L+ PI L LDTTYC+ Y+ P QE V+ ++ ++ + + L +I G+Y
Sbjct: 126 SMERLYELKQRPIDELYLDTTYCDEHYELPAQEEVLSYIRRLVRRYALKYQKLLVICGTY 185
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
TIGKE++F+ A L K++ K R+L CLD SK + T+ E+ +HV+ M +
Sbjct: 186 TIGKEKVFMMAAEELNSKVWAPTEKRRILNCLDDSKISSR-LATSPLEASVHVVNMGDVK 244
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR-----RWQQGTIIRYEVPYSE 685
LK+ + +G F+ I+A +PTGW + GK + G + +I + VPYSE
Sbjct: 245 P-ANLKNYLDSLSGSFTHILALNPTGWEYD-GKMAAKGLDAISPKSYYNSIFIHGVPYSE 302
Query: 686 HCSFTELKEFVKFVSPEHIIPSVN 709
H F+E+K FV+F P IIP+VN
Sbjct: 303 HSGFSEMKRFVRFFRPRKIIPTVN 326
>gi|224011619|ref|XP_002295584.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583615|gb|ACI64301.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 352
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/353 (41%), Positives = 207/353 (58%), Gaps = 38/353 (10%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCS-HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P++ + GT F D F Y + S ++FLTHFH DHY G+T+++ G IYCSL TA LVN
Sbjct: 2 PSYKRITGTDFICDGFFYAKRSLSENYFLTHFHSDHYGGITKNWSEGTIYCSLPTANLVN 61
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG----IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
++G+ L LP+N T IA I VT L+ANHCPG+I+ LFE N K +LH GDF
Sbjct: 62 DQLGVDRRYLHPLPMNTPTIIASKGTPITVTLLDANHCPGAIMFLFEVGN-KKILHVGDF 120
Query: 508 RF-SEEMASMSVL----QTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVI-----EAIQA 556
R+ SE M M L Q P + + LDTTYCNP Y P QE I I E A
Sbjct: 121 RWNSELMLRMPQLRAFSQLNPRLDEIFLDTTYCNPKYTLPTQEEAIAAAIEVAEREVATA 180
Query: 557 ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ KTLFL GSYTIGKE+++L VA L+ K+YV+ ++R+L L++ KE + FTTN+
Sbjct: 181 KREKTKTLFLFGSYTIGKEKIYLSVAERLKLKVYVDKRRYRILSALEWPKERMNMFTTNK 240
Query: 617 HESHIHVMPMWTLASFKRLKHM------SNQYAGRFSLIVAFSPTGWTFSKGKKK----- 665
ES + V+P+ + +FK+++ +N ++ + +V F PTGWT+S KK
Sbjct: 241 TESCLWVVPLGQV-NFKQMREFMDEGNKNNVFSAPYGRVVGFRPTGWTYSSPKKSTKPFS 299
Query: 666 -SPGRRWQQGTII-----RYE---VPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
SP ++ + I RY VPYSEH SF EL + ++ + P+ II +V+
Sbjct: 300 TSPSKKSGRNLISTKTSGRYAVHGVPYSEHSSFPELVDCLRQLKPKKIIATVS 352
>gi|66817282|ref|XP_642494.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium discoideum AX4]
gi|74861596|sp|Q86KS1.1|DCR1_DICDI RecName: Full=DNA cross-link repair 1 protein
gi|60470572|gb|EAL68551.1| DNA repair metallo-beta-lactamase domain-containing protein
[Dictyostelium discoideum AX4]
Length = 920
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 202/359 (56%), Gaps = 27/359 (7%)
Query: 373 SDRKKHAAKDQSKGR---------KHKDIP-TWCCVPGTPFRVDAFKYLRGDCSHWFLTH 422
SD KK K+++K R K K IP ++ + GT F VD F+Y D +H+FLTH
Sbjct: 232 SDLKK-TGKEEAKKRGYQVRKTPTKEKKIPPSFKVIDGTNFLVDGFQYKSEDFTHYFLTH 290
Query: 423 FHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEA 482
FH DHY G+T+++ G IYC+ T +LV+ K+G+ + N+ I G+ V L++
Sbjct: 291 FHSDHYVGITKTWSFGNIYCTEETGKLVSHKLGVDQRYIVKCEWNKLIEIQGVKVAFLDS 350
Query: 483 NHCPGSIIILF---------EPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTY 533
NHCPGS +ILF E +++LHTGDFR+++ M + +L+ I L LD TY
Sbjct: 351 NHCPGSALILFIIPLRNKDGEIIGEESILHTGDFRYNQSMNNYPLLKGRTISKLYLDNTY 410
Query: 534 CNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNA 593
C+P Y FP Q +I+ V ++ E+ + +TLFL G+Y IGKER+ LE+A+ K ++V+
Sbjct: 411 CDPQYVFPPQPEIIKQVASIVRKEN-DGETLFLFGTYVIGKERILLEIAKQEGKPVHVSN 469
Query: 594 AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
K+ +L CL + DI FTTNE + + M ++ S+ + + + ++ ++ F
Sbjct: 470 EKYAILCCLS-TCLDINKFTTNELITPFRAVTM-SMLSYHNMLSLLDSSNNKYKRVIGFR 527
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDG 712
PTGWT +K R G Y V YSEH SF EL++ + P IIP+V+ D
Sbjct: 528 PTGWTQAKKSITYLNR----GPTTFYSVAYSEHSSFNELRDCIDHFRPTQIIPTVDCDS 582
>gi|356567248|ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 189/336 (56%), Gaps = 27/336 (8%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+P T F VDAF++ +FL+HFH DHY GL+ S+ G I+CS TA L+ + IP
Sbjct: 42 IPHTRFLVDAFRHAGPHSHSYFLSHFHSDHYSGLSPSWSRGVIFCSHTTAALLRRILHIP 101
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA------VLHTGDFRFSE 511
+ LPL Q I G VT L+ANHCPG++ LF A +HTGDFRF
Sbjct: 102 AAFIVPLPLRQPLRIDGAHVTLLDANHCPGAVQFLFSVPRATADAAALRYVHTGDFRFCN 161
Query: 512 EMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQF---VIEAIQAE---SFNPKTL 564
M S L + LDTTYCNP + FP QE I + V+E+++ E + + K L
Sbjct: 162 SMVSEPALAPFVGADAVFLDTTYCNPKFVFPSQEESIDYVASVVESVERECEHNSSDKVL 221
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
FL+ +Y IGKE++ LE+AR ++KI+V+A K VL+ L + + FT + ES+IHV+
Sbjct: 222 FLVATYVIGKEKILLELARRFKRKIHVDARKMEVLRVLGYGENG--EFTEDGKESNIHVV 279
Query: 625 PMWTL---------ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT 675
W L +F R+K + + G +S +V F PTGWT+ + + +
Sbjct: 280 G-WNLLGETWPYFRPNFVRMKEVMAERGGSYSKVVGFVPTGWTYEVKRNRFAVKSKDLFK 338
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
I + VPYSEH ++ EL+E+VKF+ P+ ++P+V D
Sbjct: 339 I--HLVPYSEHSNYDELREYVKFLKPKRVVPTVGLD 372
>gi|290998549|ref|XP_002681843.1| predicted protein [Naegleria gruberi]
gi|284095468|gb|EFC49099.1| predicted protein [Naegleria gruberi]
Length = 330
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 128/331 (38%), Positives = 188/331 (56%), Gaps = 17/331 (5%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+PGT F VD FKY + + +FLTHFH DHY GL +++ HG IYC++ T LV + GI
Sbjct: 11 IPGTDFVVDGFKY-KQKYNTFFLTHFHSDHYAGLVKTWSHGSIYCTIPTCNLVKKQFGIA 69
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-PQNGKAVLHTGDFRFSEEMASM 516
L N+ G+ T L+ANHCPGS ++LF+ + GKA LHTGD RF
Sbjct: 70 DKYLNACEFNKTYEYKGVKFTFLDANHCPGSSLVLFQVSKTGKAFLHTGDMRFDRSKIDG 129
Query: 517 SVLQTCP---IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT--LFLIGSYT 571
L+ P + ++ +DTTYC+P Y FPKQ I F+ + ++++ N L LIG+Y
Sbjct: 130 ISLKGVPKKQLESIFIDTTYCDPFYTFPKQVEAIDFIADLLESKFKNTSKSYLVLIGTYL 189
Query: 572 IGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLAS 631
IGKER+ +++ KK++V K++ L+CL+ +I FT N E++IH++ M + S
Sbjct: 190 IGKERIAEGLSKRTGKKVFVTFEKYKTLECLELPYFNI--FTMNIAETNIHIVNMKDV-S 246
Query: 632 FKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTE 691
+KRL + + S I+A P+ W F + G I EVPYSEH SFTE
Sbjct: 247 WKRLFQIKSS-NRNVSEIIAIKPSAWCFKDMDIP------KNGNITLIEVPYSEHSSFTE 299
Query: 692 LKEFVKFVSPEHIIPSVNNDGRDSANAMVSL 722
LK+ V+ + +H++P+V ND A + L
Sbjct: 300 LKDCVETFNYDHLVPTVYNDPHHKARIIEML 330
>gi|12597768|gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
Length = 1417
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 185/334 (55%), Gaps = 21/334 (6%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCS-HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
IP +P T F VD F+ S +FL+HFH DHY GL+ S+ G IYCS TARLV
Sbjct: 54 IPNSKRIPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLV 113
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF----EPQNGKAVLHTGD 506
+ +P + LP+NQ I G +V +EANHCPG++ LF E + +HTGD
Sbjct: 114 AEILQVPSQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGD 173
Query: 507 FRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FRF +EM L + LDTTYCNP + FP QE + +V+ I S K LF
Sbjct: 174 FRFCDEMRFDPFLNGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKIS-EEKVLF 232
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
L+ +Y +GKE++ +E+AR ++KI V+A K +L L +E + FT +E+ES +HV+
Sbjct: 233 LVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGM--FTEDENESDVHVVG 290
Query: 626 MWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTII 677
L +F ++ + + + +V F PTGWT+ + K R I
Sbjct: 291 WNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTYEVKRNKFAVRFKDSMEI- 347
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
+ VPYSEH ++ EL+EF+KF+ P+ +IP+V D
Sbjct: 348 -HLVPYSEHSNYDELREFIKFLKPKRVIPTVGVD 380
>gi|334183682|ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana]
gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 128/334 (38%), Positives = 185/334 (55%), Gaps = 21/334 (6%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCS-HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
IP +P T F VD F+ S +FL+HFH DHY GL+ S+ G IYCS TARLV
Sbjct: 54 IPNSKRIPNTNFIVDLFRLPHQSSSVAFFLSHFHSDHYSGLSSSWSKGIIYCSHKTARLV 113
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILF----EPQNGKAVLHTGD 506
+ +P + LP+NQ I G +V +EANHCPG++ LF E + +HTGD
Sbjct: 114 AEILQVPSQFVFALPMNQMVKIDGSEVVLIEANHCPGAVQFLFKVKLESSGFEKYVHTGD 173
Query: 507 FRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FRF +EM L + LDTTYCNP + FP QE + +V+ I S K LF
Sbjct: 174 FRFCDEMRFDPFLNGFVGCDGVFLDTTYCNPKFVFPSQEESVGYVVSVIDKIS-EEKVLF 232
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
L+ +Y +GKE++ +E+AR ++KI V+A K +L L +E + FT +E+ES +HV+
Sbjct: 233 LVATYVVGKEKILVEIARRCKRKIVVDARKMSMLSVLGCGEEGM--FTEDENESDVHVVG 290
Query: 626 MWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTII 677
L +F ++ + + + +V F PTGWT+ + K R I
Sbjct: 291 WNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTYEVKRNKFAVRFKDSMEI- 347
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
+ VPYSEH ++ EL+EF+KF+ P+ +IP+V D
Sbjct: 348 -HLVPYSEHSNYDELREFIKFLKPKRVIPTVGVD 380
>gi|357130735|ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
distachyon]
Length = 1365
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 192/337 (56%), Gaps = 21/337 (6%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
+P+ +P + F VDAF++ +FL+HFH DHY GL S+ G ++CS TARL+
Sbjct: 49 VPSTALIPNSSFLVDAFRHAGDFSVAYFLSHFHSDHYAGLGPSWRRGLVFCSAPTARLLA 108
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEP--QNGKAVLHTGDFRF 509
+ +P + + + + + T+ G V ++ANHCPG++ LF N K +HTGDFR+
Sbjct: 109 SVLSVPSELIVSIDIGARITVDGWGVVAVDANHCPGAVQFLFTSPGPNTKRYVHTGDFRY 168
Query: 510 SEEMAS-MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-----QAESFNPKT 563
++ M S ++L+ + LDTTYCNP + FP QE +++V+ I ++E+ +
Sbjct: 169 TDSMRSDPNLLEFVGADAVFLDTTYCNPKFTFPSQEESVEYVVNTIKQVKEESEAAGERV 228
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
LFLI +Y +GKE++ LEVAR I+V++ K ++L L F E FT + S +HV
Sbjct: 229 LFLIATYVVGKEKILLEVARRCGCMIHVDSRKMKILTGLGFGGEK-GVFTEDAAASDVHV 287
Query: 624 MPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT 675
L +F ++K + + ++ V+F PTGW + + KK+ R +
Sbjct: 288 TGWNILGETWPYFRPNFVKMKEIMMERG--YTKAVSFVPTGWMY-ETKKEGFAVRVKDSL 344
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDG 712
I + VPYSEH S+ EL+E+VKF+ P+ +IP+V DG
Sbjct: 345 KI-HLVPYSEHSSYDELREYVKFLHPKQVIPTVGVDG 380
>gi|218194787|gb|EEC77214.1| hypothetical protein OsI_15746 [Oryza sativa Indica Group]
Length = 418
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 129/333 (38%), Positives = 180/333 (54%), Gaps = 55/333 (16%)
Query: 370 FSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDH 427
+ G R++ + + RK P + +PGTPF VDAF+Y + G C+ +FL+HFH DH
Sbjct: 119 WPGRKRRRGGEVEAAADRKPLACPFYKKIPGTPFTVDAFRYGAVEG-CNAYFLSHFHHDH 177
Query: 428 YQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
Y GLT+ + HG IYC+ +TARLV M + + + + L L+++ I G+ VT LEANHCPG
Sbjct: 178 YGGLTKKWCHGPIYCTALTARLVKMCLSVNPEYICPLELDKEYVIEGVSVTLLEANHCPG 237
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
+ +I F +GK LHTGDFR S+ M +LQ I+ L LDTTYCNP Y FP +E VI
Sbjct: 238 AALIHFRLGDGKKYLHTGDFRASKSMQLYPLLQRGQINLLYLDTTYCNPKYKFPPKEDVI 297
Query: 548 QFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRK-KIYVNAAKFRVLKCLDFS 605
F + A + PKTL ++G+Y+IGKE ++L +++ L+ + Y+ K R L L
Sbjct: 298 DFAVRTAKRYLQKEPKTLIVVGAYSIGKENVYLAISKALQNLQKYLETLKQRFLAVL--- 354
Query: 606 KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GK 663
AF PTGWTFS+ G
Sbjct: 355 ---------------------------------------------AFRPTGWTFSEETGN 369
Query: 664 KKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFV 696
+ + +G I Y VPYSEH SF+EL+EFV
Sbjct: 370 QLDLIKPSSRGKITIYGVPYSEHSSFSELREFV 402
>gi|254570835|ref|XP_002492527.1| Required for a post-incision step in the repair of DNA single and
double-strand breaks [Komagataella pastoris GS115]
gi|238032325|emb|CAY70348.1| Required for a post-incision step in the repair of DNA single and
double-strand breaks [Komagataella pastoris GS115]
gi|328353461|emb|CCA39859.1| DNA cross-link repair protein pso2/snm1 [Komagataella pastoris CBS
7435]
Length = 624
Score = 215 bits (547), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 137/412 (33%), Positives = 208/412 (50%), Gaps = 67/412 (16%)
Query: 373 SDRKKHAAKDQSKGRKHKDIPTWCCVPGTP--FRVDAFKYLRG-DCSHWFLTHFHMDHYQ 429
S+ + +KD + R K IP + T F VDAF Y + + +H+FL+HFH DHY
Sbjct: 204 SEERIEKSKDAIRNRA-KQIPDVKILNFTSCKFAVDAFCYGQHPEITHYFLSHFHADHYM 262
Query: 430 GLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI--AGIDVTCLEANHCPG 487
G+T+++H+G IYCS ITA L+ +K + + L++LP N+ I + VT ++ANHCPG
Sbjct: 263 GITKNWHNGIIYCSRITAELLVLKYNVSEEILRILPFNETMEIEDTQVKVTMMDANHCPG 322
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
S I LF +LH GDFR ++EM + L + I+ + LDTTY +P Y+FPKQE VI
Sbjct: 323 SSIFLFRDSKEHCILHCGDFRINKEM--IQKLASYKINEIYLDTTYLDPTYNFPKQENVI 380
Query: 548 QFV----------------------IEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 585
V + S K L +G+YTIGKER+ +++A+ L
Sbjct: 381 DVVGTFCENIFRGVYQHPLQQRITDFFTFRKRSKTLKPLICVGTYTIGKERIAIDIAKRL 440
Query: 586 RKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGR 645
+ K+Y ++K +L + + D T+ E+++H++PM + + ++L+ + Y
Sbjct: 441 KTKLYAQSSKREILNTFHWEELDT-LLTSTPTEANVHLIPMQYM-NLEQLEKYFHSYRND 498
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGRRWQQ--------GTIIR------------------- 678
FS I+A PTGWTF K S +W + I++
Sbjct: 499 FSQIIAIRPTGWTFVSAKNNST--KWMKELSKSQILARIVKTKNDASRFDLESIEKQFNS 556
Query: 679 ------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLLL 724
Y+VPYSEH SF EL F + IIP+VN + S M S +
Sbjct: 557 DKVTQIYQVPYSEHSSFRELSFFSILLDHTRIIPTVNMNNMQSIKNMDSWIF 608
>gi|222619063|gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group]
Length = 1455
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 191/337 (56%), Gaps = 21/337 (6%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
+P +PG+ F VDAF++ + +FL+HFH DHY GL S+ G ++CS +TARL+
Sbjct: 51 VPPTALIPGSRFLVDAFRHAGDFTASYFLSHFHSDHYTGLGPSWRRGLVFCSPLTARLLV 110
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQ--NGKAVLHTGDFRF 509
+ +P + VL + T+ G V ++ANHCPG++ LF N + +HTGDFRF
Sbjct: 111 SVLSVPPQLVVVLDAGVRVTVDGWCVVAVDANHCPGAVQFLFRSSGPNAERYVHTGDFRF 170
Query: 510 SEEMASM-SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-----QAESFNPKT 563
S+ M + ++L+ + LDTTYCNP + FP Q+ +++V+ +I ++ + +
Sbjct: 171 SQSMITEPNLLEFIGADAVFLDTTYCNPKFTFPPQKESLEYVVNSIKRVKEESRASGERV 230
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L LI +Y +GKER+ LEVAR KI+V++ K +L L ED FT + + +HV
Sbjct: 231 LCLIATYVVGKERILLEVARRCGCKIHVDSRKMEILTLLGIGGED-GVFTEDAAATDVHV 289
Query: 624 MPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT 675
L +F ++K + + ++ V F PTGW + + KK+ R +
Sbjct: 290 TGWNILGETWPYFRPNFVKMKEIMVERG--YNKAVGFVPTGWMY-ETKKEGFAVRTKDSL 346
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDG 712
I + VPYSEH S+ EL+++VKF+ P+ +IP+V DG
Sbjct: 347 EI-HLVPYSEHSSYNELRDYVKFLHPKRVIPTVGLDG 382
>gi|326520423|dbj|BAK07470.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 159/264 (60%), Gaps = 11/264 (4%)
Query: 369 SFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMD 426
++SG R+ + + RK P + +PGTPF VDAF+Y + G C +FL+HFH D
Sbjct: 142 AWSGRKRRWGGSDENGASRKPVACPFYKKIPGTPFTVDAFRYGAVEG-CYAYFLSHFHND 200
Query: 427 HYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCP 486
HY GLT+ + HG IYC+ ITARLV M + I + L L+ + I G+ VT LEANHCP
Sbjct: 201 HYGGLTKKWCHGPIYCTAITARLVKMLLSIDSAYVCPLELDTEYVIDGVKVTFLEANHCP 260
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
G+ +I F +GK LHTGDFR S+ M +LQT I L LDTTYCNP Y FP QE V
Sbjct: 261 GAALIHFRLSDGKTYLHTGDFRASKSMQLHPLLQTGRISLLYLDTTYCNPKYKFPPQEDV 320
Query: 547 IQFVIEAIQAE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL--- 602
I FV+ Q PKTL ++G+Y+IGKE ++L +++ L IY +A++ R+L
Sbjct: 321 IDFVVRTAQRYLKKQPKTLIVVGAYSIGKENVYLAISQALEVPIYTDASRRRILHSFGWP 380
Query: 603 DFSKEDIQWFTTNEHESHIHVMPM 626
D SK ++ S +HV+P+
Sbjct: 381 DLSKR----ISSCNQSSPLHVLPL 400
>gi|326435694|gb|EGD81264.1| hypothetical protein PTSG_11300 [Salpingoeca sp. ATCC 50818]
Length = 699
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 12/301 (3%)
Query: 365 GSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHF 423
GS K SGSD H R+ + P + V T F VDAF Y +C+ +FL+HF
Sbjct: 346 GSSKE-SGSDASTHGLP-----RRLRQCPFYKWVKDTSFTVDAFSYGAIPNCTAYFLSHF 399
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHY GLT+SF K+YCS TARL + + +P ++L LP+N + G+ V ++AN
Sbjct: 400 HADHYTGLTKSFP-AKVYCSEATARLCTLLLRVPPEKLNPLPMNTPVKVQGVTVELIDAN 458
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQ 543
HCPG+ +I+F +G+ +HTGDFR E + + + IHT+ LDTTYC+P Y FP Q
Sbjct: 459 HCPGAAVIVFTLPSGRRHVHTGDFRACEAIWQHTSIAGKRIHTVYLDTTYCDPRYTFPSQ 518
Query: 544 EAVIQFVIE-AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
AV+ FV AI+ +P L ++GSYTIGKE++FL +AR L ++Y + K ++ CL
Sbjct: 519 YAVLNFVANLAIKYLKRHPHLLVVVGSYTIGKEKVFLSIARALGCRVYASTRKQQIFGCL 578
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWT--LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS 660
+ + T N E+ +HV M T L + R + RF ++ F PTGWT S
Sbjct: 579 QDDALN-EVLTDNPLEAQVHVTSMSTVNLDNLARYYREGYGFRKRFEHVLGFRPTGWTHS 637
Query: 661 K 661
+
Sbjct: 638 Q 638
>gi|357508239|ref|XP_003624408.1| DNA ligase [Medicago truncatula]
gi|355499423|gb|AES80626.1| DNA ligase [Medicago truncatula]
Length = 1498
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 188/331 (56%), Gaps = 18/331 (5%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
IP +P T F +D+F++ +FL+HFH DHY L+ S+ HG I+CS IT+ L+
Sbjct: 43 IPHSKLIPNTRFLIDSFRHTTPSSFTYFLSHFHSDHYSPLSSSWSHGIIFCSPITSHLLI 102
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA--VLHTGDFRF 509
+ IP + L LNQ I G VT ++ANHCPG++ LF+ ++ +HTGDFRF
Sbjct: 103 NILHIPSPFVHPLSLNQSVVIDGSVVTLIDANHCPGAVQFLFKVNETESPRYVHTGDFRF 162
Query: 510 SEEM-ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ EM +++ + + LDTTYC+P + FP Q + ++++ ++ E LFL+
Sbjct: 163 NREMLLDLNLGEFIGADAVFLDTTYCHPKFVFPTQNESVDYIVDVVK-ECDGENVLFLVA 221
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
+Y +GKE++ LE+AR KK+ V+ K VL+ L + + FT + ES++HV+
Sbjct: 222 TYVVGKEKILLEIARRCGKKVCVDGKKMEVLRALGYGESG--EFTEDRLESNVHVVGWNV 279
Query: 629 LA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE 680
L +F R+K + + +S +V F PTGWT+ + K R I +
Sbjct: 280 LGETWPYFRPNFVRMKEIMVERG--YSKVVGFVPTGWTYEVKRDKFKVREKDSCKI--HL 335
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
VPYSEH ++ EL+E+V+F+ P+ ++P+V D
Sbjct: 336 VPYSEHSNYEELREYVRFLKPKKVVPTVGLD 366
>gi|431895428|gb|ELK04944.1| DNA cross-link repair 1A protein [Pteropus alecto]
Length = 1008
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 163/267 (61%), Gaps = 5/267 (1%)
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
IT L+ K+ + + LP++ + + G+ V L+ANHCPG+++ILF NG LHT
Sbjct: 722 ITGNLLKSKLHVQEQYIHSLPVDTECVVNGVKVVLLDANHCPGAVMILFYLPNGNVTLHT 781
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKT 563
GDFR M S+L +HTL LDTTYC+P Y FP Q+ VIQF + A +A + NP+T
Sbjct: 782 GDFRADPTM-ERSLLAGQKVHTLYLDTTYCSPEYSFPSQQEVIQFAVNTAFEAVTLNPRT 840
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L + G+Y+IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ S +H+
Sbjct: 841 LVVCGTYSIGKEKVFLAIADVLGSKVGMSKEKYKTLQCLNIP-EINSLITTDMCSSLVHL 899
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIRYEVP 682
+PM + +FK L+ GR+ I+AF PTGWT S Q +G I Y +P
Sbjct: 900 LPMMKI-NFKGLQSHLKTCDGRYDQILAFRPTGWTHSNKLTSIADVIPQTKGNIAIYGIP 958
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVN 709
YSEH S+ E+K FV+++ P+ IIP+VN
Sbjct: 959 YSEHSSYLEMKRFVQWLKPQKIIPTVN 985
>gi|242058371|ref|XP_002458331.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor]
gi|241930306|gb|EES03451.1| hypothetical protein SORBIDRAFT_03g031460 [Sorghum bicolor]
Length = 539
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 193/348 (55%), Gaps = 22/348 (6%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
+P +PG+ F VDAF++ +FL+HFH DHY GL S+ G ++CS TARLV+
Sbjct: 52 VPPTALIPGSRFLVDAFRHAGDFSVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPTARLVS 111
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA--VLHTGDFRF 509
+ +P + L + + T+ G VT ++ANHCPG++ LF A +HTGDFR+
Sbjct: 112 SVLSVPPQLVVSLDVGVRITVDGWSVTAVDANHCPGAVQFLFASPGPSAERYVHTGDFRY 171
Query: 510 SEEMA-SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-----QAESFNPKT 563
+E M ++L+ + LDTTYCNP + FP QE + +V+ AI ++ +
Sbjct: 172 TESMTRDPNLLEFVRADAVFLDTTYCNPKFTFPSQEDSVDYVVNAIKRVKEESSVSGERV 231
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L LI +Y +GKER+ LEVAR I+V++ K ++L L F E+ FT + + +HV
Sbjct: 232 LCLITTYAVGKERILLEVARRCGCSIHVDSRKMKILTVLGFGGEN-GVFTEDATGTDVHV 290
Query: 624 MPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT 675
+ L +F ++K + + ++ V F PTGW + + KK+ R +
Sbjct: 291 IGWNILGETWPYFQPNFVKMKEIMIERG--YAKAVGFVPTGWMY-ETKKEGFAVRVKDSL 347
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND-GRDSANAMVSL 722
I VPYSEH S+ EL++++KF+ P+ +IP+V D GR + V+L
Sbjct: 348 EIHL-VPYSEHSSYNELRDYIKFLHPKKVIPTVGVDAGRLDSKEAVAL 394
>gi|359488141|ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
Length = 1449
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 194/352 (55%), Gaps = 30/352 (8%)
Query: 391 DIPTWCCVPGTPFRVDAFKYLRGDCS-HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+ P +P + F VD F+ GD S +FL+HFH DHY GL+ + +G I+CS TARL
Sbjct: 88 NFPQSKLIPKSRFVVDGFR-CSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARL 146
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE--PQNGK--AVLHTG 505
+ +G+ + L ++Q I G +V L+ANHCPG++ LF+ +G+ +HTG
Sbjct: 147 LVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRFERYVHTG 206
Query: 506 DFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK-- 562
DFRF E M L + + LDTTYCNP + FP Q+ + +++EAI+ K
Sbjct: 207 DFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKFVFPSQDESVDYIVEAIERIGLENKGL 266
Query: 563 ---TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
LFL+ +Y IGKER+ LE++R KI+V+ K VL+ L + ED FT +E +S
Sbjct: 267 MKSVLFLVATYVIGKERILLEISRRRNCKIHVDGRKMSVLRVLGY--EDGGVFTEDESKS 324
Query: 620 HIHVMPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW 671
+HV+ L +F ++K + + +S +V F PTGWT+ + K R
Sbjct: 325 DVHVVGWNVLGETWPYFRPNFVKMKEIMIERG--YSKVVGFVPTGWTYEVKRNKFAMRTK 382
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND----GRDSANAM 719
I + VPYSEH ++ EL+E+VKF+ P+ +IP+V D ANAM
Sbjct: 383 DSFEI--HLVPYSEHSNYDELREYVKFLRPKRVIPTVGLDIEKLDSKHANAM 432
>gi|296087222|emb|CBI33596.3| unnamed protein product [Vitis vinifera]
Length = 1390
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 130/352 (36%), Positives = 194/352 (55%), Gaps = 30/352 (8%)
Query: 391 DIPTWCCVPGTPFRVDAFKYLRGDCS-HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+ P +P + F VD F+ GD S +FL+HFH DHY GL+ + +G I+CS TARL
Sbjct: 45 NFPQSKLIPKSRFVVDGFR-CSGDYSVTYFLSHFHSDHYSGLSPKWSNGIIFCSNTTARL 103
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE--PQNGK--AVLHTG 505
+ +G+ + L ++Q I G +V L+ANHCPG++ LF+ +G+ +HTG
Sbjct: 104 LVEVLGVSSLFVYPLAVSQPVLIDGCEVALLDANHCPGAVQFLFKVPGVDGRFERYVHTG 163
Query: 506 DFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK-- 562
DFRF E M L + + LDTTYCNP + FP Q+ + +++EAI+ K
Sbjct: 164 DFRFCESMKLEPCLGEFVGSEAVFLDTTYCNPKFVFPSQDESVDYIVEAIERIGLENKGL 223
Query: 563 ---TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
LFL+ +Y IGKER+ LE++R KI+V+ K VL+ L + ED FT +E +S
Sbjct: 224 MKSVLFLVATYVIGKERILLEISRRRNCKIHVDGRKMSVLRVLGY--EDGGVFTEDESKS 281
Query: 620 HIHVMPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW 671
+HV+ L +F ++K + + +S +V F PTGWT+ + K R
Sbjct: 282 DVHVVGWNVLGETWPYFRPNFVKMKEIMIERG--YSKVVGFVPTGWTYEVKRNKFAMRTK 339
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND----GRDSANAM 719
I + VPYSEH ++ EL+E+VKF+ P+ +IP+V D ANAM
Sbjct: 340 DSFEI--HLVPYSEHSNYDELREYVKFLRPKRVIPTVGLDIEKLDSKHANAM 389
>gi|297838379|ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332912|gb|EFH63330.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1413
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 188/340 (55%), Gaps = 26/340 (7%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSH--WFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
IP +P T F VD F++ + + +FL+HFH DHY GL+ ++ G I+CS TARL
Sbjct: 54 IPQSKRIPKTNFIVDLFRFPQHSSTSVAFFLSHFHSDHYSGLSSTWSKGIIFCSHKTARL 113
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEP--QNG--KAVLHTG 505
V + +P + LP+NQ I G +V +EANHCPG++ LF+ +NG + +HTG
Sbjct: 114 VEEILQVPSQFVFALPMNQMVMIDGSEVVLIEANHCPGAVQFLFKVKLENGGFERYVHTG 173
Query: 506 DFRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-----QAESF 559
DFRF +EM S L + LDTTYCNP + FP QE + +V+ I +
Sbjct: 174 DFRFCDEMRFDSFLSGFIGCDGVFLDTTYCNPKFVFPTQEESVGYVVSVIDKIDGECVET 233
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
K LFL+ +Y IGKE++ +E+AR ++KI V+ K +L L + + FT + +ES
Sbjct: 234 KKKVLFLVATYVIGKEKILVEIARRCKRKIVVDLRKMSILGILGCGESGM--FTEDVNES 291
Query: 620 HIHVMPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW 671
+HV+ L +F ++ + + + +V F PTGWT+ + K R
Sbjct: 292 DVHVVGWNVLGETWPYFRPNFVKMNEIMVEKG--YDKVVGFVPTGWTYEVKRNKFAVRFK 349
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
I + VPYSEH ++ EL+E++KF+ P+ +IP+V D
Sbjct: 350 DSMEI--HLVPYSEHSNYDELREYIKFLKPKRVIPTVGVD 387
>gi|414880948|tpg|DAA58079.1| TPA: putative DNA ligase family protein, partial [Zea mays]
Length = 885
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/332 (34%), Positives = 186/332 (56%), Gaps = 23/332 (6%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+PG+ F VDAF++ +FL+HFH DHY GL S+ G ++CS TARLV+ + +P
Sbjct: 58 IPGSRFLVDAFRHAGNFSVAYFLSHFHSDHYSGLGPSWRRGLVFCSAPTARLVSSVLSVP 117
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA--VLHTGDFRFSEEMA- 514
+ L + + T+ G VT ++ANHCPG++ LF +A +HTGDFR++E M
Sbjct: 118 PQLVVSLDIGVRITVDGWGVTAVDANHCPGAVQFLFASPGPRAERYVHTGDFRYTESMTR 177
Query: 515 SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-----QAESFNPKTLFLIGS 569
++L+ + LDTTYCNP + FP QE + +++ AI ++ + L LI +
Sbjct: 178 DPNLLEFVRADAVFLDTTYCNPKFTFPSQEDSVDYIVNAIKRVKEESSVSGERVLCLIAT 237
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
Y +GKE++ LEVA+ I+V++ K ++L L F ++ FT + + +HV+ W L
Sbjct: 238 YAVGKEKILLEVAQRCGCSIHVDSRKMKILTLLGFGGKN-SVFTEDATGTDVHVLG-WNL 295
Query: 630 A---------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE 680
+F +LK + + ++ V F PTGW + + KK+ R + I
Sbjct: 296 LGETSPYFQPNFVKLKEIMMERG--YAKAVGFVPTGWMY-ETKKEGFAVRVKDSLEIHL- 351
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDG 712
VPYSEH S+ EL+++VKF+ P+ +IP+ D
Sbjct: 352 VPYSEHSSYNELRDYVKFLHPKSVIPTAGVDA 383
>gi|158290010|ref|XP_311587.4| AGAP010353-PA [Anopheles gambiae str. PEST]
gi|157018434|gb|EAA07248.4| AGAP010353-PA [Anopheles gambiae str. PEST]
Length = 689
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/369 (36%), Positives = 195/369 (52%), Gaps = 26/369 (7%)
Query: 347 LGSITNVKKVS-TPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRV 405
+ I+ + +VS TP N R S + + +A+ SK K P++ + GT F V
Sbjct: 231 ISGISRLSEVSLTPKN-----RSSVTPGLKAPRSAR--SKSGKKIMCPSYKIIAGTNFAV 283
Query: 406 DAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQ 462
DAF+Y GD +H+FLTHFH DHY GL ++F I S ITARLV I + + Q
Sbjct: 284 DAFRY--GDIEGVTHYFLTHFHADHYIGLKKTFSKPLIMSS-ITARLVKAFINVAEEFYQ 340
Query: 463 VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC 522
++ L+Q I +++ L+ANHCPG I+ LF NG VLHTGDFR S EM
Sbjct: 341 IVELHQSIVIDDVEIIALDANHCPGGIMFLFRLPNGSNVLHTGDFRASPEMEEYPEFWNF 400
Query: 523 PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA---ESFNPKTLFLIGSYTIGKERLFL 579
I + LDTTY + Y F Q + E + A + K L + GSY IGKE+++L
Sbjct: 401 QIDIIYLDTTYLSSKYAFKSQWESVADARETVSAYLKKHIGVKVLIVCGSYLIGKEKVWL 460
Query: 580 EVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS 639
E+A K++ +++ LK + S++ + + ++++IHV+ M L S+ L
Sbjct: 461 ELAISTGMKVWTEPNRWKALKAIADSQQ-LSVLVADPNKANIHVLAMNKL-SYDELNEYM 518
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
NQ+ R+ ++A P+GW K P R G I + YSEH SF ELK FV+F+
Sbjct: 519 NQFPDRYESVIAIRPSGWE----KNSKPQYR---GRINIVGIEYSEHSSFDELKRFVQFL 571
Query: 700 SPEHIIPSV 708
P +I +V
Sbjct: 572 RPHEVISTV 580
>gi|195568456|ref|XP_002102232.1| GD19792 [Drosophila simulans]
gi|194198159|gb|EDX11735.1| GD19792 [Drosophila simulans]
Length = 768
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/346 (35%), Positives = 194/346 (56%), Gaps = 23/346 (6%)
Query: 380 AKDQSKG-----RKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLT 432
AK+ +KG RK K P + V GT F VD F++ + G +H+FLTHFH DHY GLT
Sbjct: 252 AKNSTKGTGRKQRKPKPCPPYKVVEGTSFCVDGFQFGEIEG-VTHYFLTHFHADHYIGLT 310
Query: 433 RSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIIL 492
+ F H +Y S TARLV I + + + ++Q + G+ VT LEANHCPG+++
Sbjct: 311 KKFCH-PLYVSPTTARLVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEANHCPGALMFF 369
Query: 493 FEPQNGKAVLHTGDFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVI 551
F+ +G+ +LHTGDFR S +M S+ + I L LDTTY N YDF Q + +
Sbjct: 370 FKLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQSESVDRAV 429
Query: 552 EAIQA---ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
E ++A ++ + L + GSY IGKE+++L +A+ K++ + + ++CL++ D
Sbjct: 430 ELVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMKVWTESNRSNAVRCLNWPDLD 489
Query: 609 IQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
T + +++HV+ M + S+ L ++ ++ +++ P+GW K K S G
Sbjct: 490 -SVLTEDRRGANLHVIAMGKI-SYPSLVDYFTEFEDQYDMLLGIRPSGW--EKNSKPSYG 545
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
+R I + YSEH S+ EL+ FV+F+ P+ +I +V GRD
Sbjct: 546 KR-----ISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV-GRD 585
>gi|428183181|gb|EKX52039.1| hypothetical protein GUITHDRAFT_65538 [Guillardia theta CCMP2712]
Length = 367
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 177/327 (54%), Gaps = 21/327 (6%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH-GKIYCSLITARLVNMKIGIPWDRLQV 463
VD FKY +FL+HFH DHY GL+ +F G+IYC+ T LV ++ + + +
Sbjct: 19 VDGFKYADKQVEAFFLSHFHGDHYDGLSENFDGPGRIYCTKTTGDLVVQELKVRKELVVC 78
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS--VLQT 521
+ + G VT L+ANHCPG+ ++LFE ++G LHTGD R+ ++M V +
Sbjct: 79 YEYGESAHVCGAKVTFLDANHCPGAALLLFELEDGTVHLHTGDMRYDKKMKEYPELVCRR 138
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVI---EAIQAESFN------PKTLFLIGSYTI 572
I + LDTTYC+P + FP Q+ I + EAI N + L L+ +Y I
Sbjct: 139 GLIDRVYLDTTYCHPKHVFPGQDKSIDIIASDQEAIDGAQENRDGDDPSRRLVLLSAYKI 198
Query: 573 GKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM------ 626
GKER+ EVAR + K+YV+ AK RV++CL S+ED+ FT N ES IH+ M
Sbjct: 199 GKERVICEVARRAKAKVYVDEAKMRVMRCLRMSEEDLSVFTCNMRESQIHICRMGFAGDI 258
Query: 627 WTL--ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
W +F ++ F+ +AF PTGW S K +++ ++ VPYS
Sbjct: 259 WPFFRPNFVNIERYIKDNDLPFTSCMAFIPTGWADSSNYNKKNSLQFKGNFSVKC-VPYS 317
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNND 711
EH ++ EL EFV+F+ P ++ P+V D
Sbjct: 318 EHSNYNELVEFVEFLRPRNVFPTVFTD 344
>gi|148669814|gb|EDL01761.1| DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 557
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/247 (42%), Positives = 153/247 (61%), Gaps = 7/247 (2%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 286 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 343
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
IT L+ K+ + ++ LP++ + + + V L+ANHCPG+ +ILF+ NG +LH
Sbjct: 344 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANHCPGATMILFQLPNGAVILH 403
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPK 562
TGDFR M S L +HTL LDTTYC+P Y FP Q+ VIQF I A +A + NP+
Sbjct: 404 TGDFRADPSM-ERSRLAGRKVHTLFLDTTYCSPEYTFPSQQEVIQFAINTAFEAVTLNPR 462
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L + G+Y IGKE++FL +A VL K+ ++ K++ L+CL+ E TT+ +S +H
Sbjct: 463 ALVVCGTYCIGKEKVFLAIADVLGSKVGMSQEKYKTLQCLNIP-EVSSLITTDMCDSLVH 521
Query: 623 VMPMWTL 629
++PM +
Sbjct: 522 LLPMMQI 528
>gi|157129880|ref|XP_001661798.1| DNA cross-link repair protein pso2/snm1 [Aedes aegypti]
gi|108872037|gb|EAT36262.1| AAEL011626-PA [Aedes aegypti]
Length = 778
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 120/322 (37%), Positives = 173/322 (53%), Gaps = 18/322 (5%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
P + + GT F VDAF+Y GD SH+FL+HFH DHY GL RSF I S IT+RL
Sbjct: 360 PKYKIIAGTNFAVDAFRY--GDIEGVSHYFLSHFHADHYIGLKRSFAKPLI-MSPITSRL 416
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V I + Q++ L++ I + +T L+ANHCPG+++ LF+ G +LHTGDFR
Sbjct: 417 VKAFINVEESYYQLIDLHETIVIDNVRITALDANHCPGAVMFLFQLPTGTNILHTGDFRA 476
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQ-EAVIQF--VIEAIQAESFNPKTLFL 566
S EM IH++ LDTTY + Y F Q E++ V+ I + + L +
Sbjct: 477 SSEMEEYPEFWNMEIHSIYLDTTYLSSKYAFKSQWESITDACDVVRTILNRNIGARVLIV 536
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
GSY IGKE+++ E+A K++ + + L +D + QW + + IHV+ M
Sbjct: 537 CGSYLIGKEKVWAELAAQFNYKVWTEPNRRKALVAVDDPLQQ-QWLVEDPKFADIHVLSM 595
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
L S+ L Q+ R+ L++A P+GW K P R G I V YSEH
Sbjct: 596 NKL-SYDELVSYVEQFPDRYDLLIALRPSGWE----KNSRPQYR---GRINIVGVEYSEH 647
Query: 687 CSFTELKEFVKFVSPEHIIPSV 708
SF ELK FV+++ P+ +I +V
Sbjct: 648 SSFNELKRFVRYLRPQEVISTV 669
>gi|195391946|ref|XP_002054620.1| GJ24554 [Drosophila virilis]
gi|194152706|gb|EDW68140.1| GJ24554 [Drosophila virilis]
Length = 654
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 125/341 (36%), Positives = 191/341 (56%), Gaps = 20/341 (5%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHH 437
++ K R+ K P + V T F VD F++ GD +H+FL+H+H DHY GLTR F H
Sbjct: 225 ENMPKTRQRKRCPPYKIVEDTTFVVDGFQF--GDIPNATHYFLSHYHGDHYVGLTRKFAH 282
Query: 438 GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN 497
+Y S ITARLV I I L + ++Q T+ I+VT ++ANHCPG+I+++F+
Sbjct: 283 -PLYMSPITARLVRTFIPIDSQYLHEIAVDQSITLNDIEVTAIDANHCPGAIMLIFKFST 341
Query: 498 GKAVLHTGDFRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFV---IEA 553
GK +LHTGDFR S EM S+ + P I L LDTTY + YDF Q I V +
Sbjct: 342 GKCILHTGDFRASFEMESLPIFWNQPNIDLLYLDTTYLSQNYDFCHQSDSIYRVCSLVRQ 401
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
+ + + L + GSY IGKE+++L + R +++ + + + CLD+ E
Sbjct: 402 FHEKHASKRILHVCGSYLIGKEKVWLALVEEFRLRVWTEPNRRKAIDCLDWP-ELKHSLC 460
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ E+++HV+ M + S+ +L Q+ G + +++ P+GW K K S G+R
Sbjct: 461 DDPFEANLHVINMGKI-SYPQLDQYFKQFEGHYDMLLGIRPSGW--EKNSKPSYGKR--- 514
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
I V YSEH S+ EL+ FV+F+ P+++I +V GRD
Sbjct: 515 --ISVIGVEYSEHSSYKELERFVRFLKPKNVISTVPL-GRD 552
>gi|339245771|ref|XP_003374519.1| DNA cross-link repair 1A protein [Trichinella spiralis]
gi|316972306|gb|EFV55989.1| DNA cross-link repair 1A protein [Trichinella spiralis]
Length = 517
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/371 (35%), Positives = 193/371 (52%), Gaps = 37/371 (9%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
K + P + VPGT F VDAFK+ + D +FL+HFH DHY GLTR F I CS IT
Sbjct: 148 KFRRCPKYKFVPGTSFVVDAFKFGKIPDIELYFLSHFHYDHYVGLTRHFD-APICCSQIT 206
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGID-VTCLEANHCPGSIIILFEPQNGKAVLHTG 505
A LV++K+ +P L+VL +N+ + + V ++ANHCPG+++ LF +N VLHTG
Sbjct: 207 ASLVHLKLKVPKSFLRVLSVNEWIDLGDDNSVILIDANHCPGAVMFLFHLKNDHYVLHTG 266
Query: 506 DFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-QAESFNPKTL 564
DFR + + + + L LDTTY NP Y FP Q I +I + Q + + K L
Sbjct: 267 DFRAERVVLDNPIWSSIRVDYLYLDTTYFNPAYIFPCQMVAITKMISIVKQIQQQHNKLL 326
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
L+G+Y +GKER+F +A L K+ V K + LKC D K+ T + + +HV+
Sbjct: 327 ILVGTYEVGKERIFTALAEALDCKVAVEKNKMQTLKCFD-DKKLSDSLTLLKSSTFLHVV 385
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS------------KGKKKSPGRRWQ 672
M L K ++++ + +VA PTGW FS K G+R+
Sbjct: 386 SMGVLNRQKLTAYLASY--PTYEHLVAIKPTGWEFSGRTEDNLIDVQKMNKITILGKRFI 443
Query: 673 -QGTIIRY-----------------EVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
+ +++Y VPYSEH SF ELK+FV + P+ ++P+VN R
Sbjct: 444 FRIYVLQYVGCGPESLRNFSGKASARVPYSEHSSFAELKQFVLKLRPKQVVPTVNVSARA 503
Query: 715 SANAMVSLLLN 725
N ++ LN
Sbjct: 504 EINRVIGQWLN 514
>gi|195109660|ref|XP_001999401.1| GI24489 [Drosophila mojavensis]
gi|193915995|gb|EDW14862.1| GI24489 [Drosophila mojavensis]
Length = 662
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/383 (33%), Positives = 204/383 (53%), Gaps = 28/383 (7%)
Query: 333 SSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDI 392
S++P L+ D L + V + T G +D H+ ++ K RK K
Sbjct: 189 SARPIPIDLLKDCQLNPLPMVNIPNLETQG---------SNDAGAHSKENGLKERKRKRC 239
Query: 393 PTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
P++ V T F VD F++ GD +H+FL+H+H DHY GLTR F H +Y S ITA+L
Sbjct: 240 PSYKIVEDTTFVVDGFQF--GDIPNATHYFLSHYHADHYVGLTRKFAH-PLYMSPITAKL 296
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V I I + + + + T+ I+VT ++ANHCPG+I+++F+ GK +LHTGDFR
Sbjct: 297 VRTFIPIDNQYMHEIEVGESITLNEIEVTAIDANHCPGAIMLMFKFTTGKCILHTGDFRA 356
Query: 510 SEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA---ESFNPKTLF 565
S EM S+ + P I L LDTTY + YDF Q I + A++ ++ + + L
Sbjct: 357 SFEMESLPIFWNEPQIDVLYLDTTYLSKNYDFCHQSDSIDRIRTAVRQFHEKNADKRILH 416
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ GSY IGKE+++L + +++ + + + CLD+ + + N E+++HV+
Sbjct: 417 VCGSYLIGKEKVWLALVEEFSLRVWTEPHRRKAIDCLDWPELQLS-LCDNPLEANLHVIN 475
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
M + S+ L + G + +++ P+GW K K S G+R I V YSE
Sbjct: 476 MGKI-SYPSLDQYFKAFEGHYDMLLGIRPSGW--EKNSKPSYGKR-----ISVIGVEYSE 527
Query: 686 HCSFTELKEFVKFVSPEHIIPSV 708
H S+ EL+ FV+F+ P +I +V
Sbjct: 528 HSSYKELERFVRFLKPNKVISTV 550
>gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis]
Length = 1506
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 183/365 (50%), Gaps = 44/365 (12%)
Query: 398 VPGTPFRVDAFKYLRG---DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+PG F VD F+ +FLTH H DHY GL + G IYCS +TARL+ +
Sbjct: 15 IPGCGFLVDGFQTRYAAHPSVKAYFLTHAHSDHYNGLRDDWSRGVIYCSHVTARLIAHML 74
Query: 455 GIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA 514
G+ L LPL+ T I G++VT + ANHCPG++ LF +G+ +HTGD RFS +
Sbjct: 75 GVGRRWLHPLPLDSPTMIQGVEVTLVSANHCPGAVQFLFRLPDGRRFIHTGDMRFSPALL 134
Query: 515 SMSVLQT---CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ---------------- 555
+ LQ L LDTTYCNP Y FP QE I++V IQ
Sbjct: 135 ANPHLQQFRRVGCDALFLDTTYCNPRYCFPPQEESIEYVASTIQRLLQEDAEQQQQESQG 194
Query: 556 ------AESFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
A P + L+LI +Y IGKER+ V +++V K V++ LD D
Sbjct: 195 EGREPGARQRRPFRRLYLISTYGIGKERILTAVHDRCGVRLHVADRKHAVMQQLDLPGYD 254
Query: 609 -IQWFTTNEHESHIHVMPMW-----TLASFKRLKHMSNQYAGRFSL----IVAFSPTGWT 658
Q FTT+ + +HV+ W T F+ + +Q A R L +V F PTGW
Sbjct: 255 PSQLFTTDRGSTPVHVV-QWGFLGETWPYFR--PNFVSQEALRQELGAEEVVGFVPTGWL 311
Query: 659 FSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANA 718
+ K+ +R +G + VPYSEH SF EL+E+V+F+ P ++P+V +G D A
Sbjct: 312 YEMRKETFAVKR--KGACSVHLVPYSEHNSFDELREYVRFLRPLQVVPTVGVEGEDGDKA 369
Query: 719 MVSLL 723
+L
Sbjct: 370 RDRML 374
>gi|21357063|ref|NP_649548.1| Snm1 [Drosophila melanogaster]
gi|7296732|gb|AAF52011.1| Snm1 [Drosophila melanogaster]
gi|16198055|gb|AAL13814.1| LD28027p [Drosophila melanogaster]
gi|220945898|gb|ACL85492.1| Snm1-PA [synthetic construct]
gi|220955582|gb|ACL90334.1| Snm1-PA [synthetic construct]
Length = 763
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/355 (34%), Positives = 199/355 (56%), Gaps = 21/355 (5%)
Query: 366 SRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHF 423
+++S G + KK + Q RK K P + V GT F VD F++ + G +H+FLTHF
Sbjct: 241 TKESPLGKNSKKGTVRKQ---RKPKPCPPYKVVEGTSFCVDGFQFGEIEG-VTHYFLTHF 296
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHY GLT+ F H +Y S I+ARLV I + + + ++Q + G+ VT LEAN
Sbjct: 297 HADHYIGLTKKFCH-PLYVSPISARLVRTFIKLDETHIHEIDVDQTLDVDGVQVTALEAN 355
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPK 542
HCPG+++ F+ +G+ +LHTGDFR S +M S+ + I L LDTTY N YDF
Sbjct: 356 HCPGALMFFFKLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCH 415
Query: 543 QEAVIQFVIEAIQA---ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
Q + ++ ++A ++ + L + GSY IGKE+++L +A+ +++ + + +
Sbjct: 416 QSESVDRAVDLVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMRVWTESNRSTAV 475
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
+CL++ D T + +++HV+ M + S+ L ++ ++ +++ P+GW
Sbjct: 476 RCLNWPDLD-SVLTEDRSGANLHVIAMGKI-SYPSLVDYFTEFEDQYDMLLGIRPSGW-- 531
Query: 660 SKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
K K S G+R I + YSEH S+ EL+ FV+F+ P+ +I +V GRD
Sbjct: 532 EKNSKPSYGKR-----ISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV-GRD 580
>gi|307108579|gb|EFN56819.1| hypothetical protein CHLNCDRAFT_144365 [Chlorella variabilis]
Length = 520
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 177/327 (54%), Gaps = 31/327 (9%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
VPGTPF VD F++ C +FLTH H DH GL+RSF G IYCS ITARL+ +GI
Sbjct: 11 VPGTPFLVDGFRFQHPACRAFFLTHMHSDHTTGLSRSFSAGPIYCSPITARLLRCDMGIR 70
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS 517
D +++LPL+ TTI G++V ++ANHCPG+++ LF +LHTGD R+ MA +
Sbjct: 71 PDLIRILPLDLPTTICGVEVVPIDANHCPGAVMFLFRAPT--TILHTGDVRWQAGMAQHA 128
Query: 518 VLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNP--KTLFLIGSYTIGK 574
L + L+LDTTY + FP QE V++ +++A+ E + P LF++GSY IGK
Sbjct: 129 ALTGRQVDVLMLDTTYSQRKWTFPPQEEVVELMVQAMAREAAAGPPGAVLFVVGSYHIGK 188
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
ER +L L +++ + AK R+L L + T E+ IHV+ M
Sbjct: 189 ERAYLGAGAALGWRVHCSPAKRRLLHMLGLPAAWLALLTDVAEEAQIHVLGM---GEQLH 245
Query: 635 LKHMSNQYAG-RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELK 693
+ ++++ AG R+ VA PTGW++ R + G +R E
Sbjct: 246 PQALADRIAGTRWQRAVAIRPTGWSW----------RPKGGLDVRTE------------G 283
Query: 694 EFVKFVSPEHIIPSVNNDGRDSANAMV 720
E V+ + P +IP+V+ ++ A+V
Sbjct: 284 ECVRALRPRRLIPTVDAADAAASRAVV 310
>gi|194767629|ref|XP_001965917.1| GF11594 [Drosophila ananassae]
gi|190619760|gb|EDV35284.1| GF11594 [Drosophila ananassae]
Length = 676
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 194/340 (57%), Gaps = 24/340 (7%)
Query: 384 SKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDC---SHWFLTHFHMDHYQGLTRSFHHGKI 440
SK RK K P + V GT F VD F++ GD +H+FLTH+H DHY GLT+ F H +
Sbjct: 283 SKQRKPKPCPPYKVVEGTTFCVDGFQF--GDVAGVTHYFLTHYHADHYIGLTKKFSH-PL 339
Query: 441 YCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA 500
Y S ITARLV + I + + + +++ + ++VT +EANHCPG+++ F+ +G+
Sbjct: 340 YMSPITARLVRLFIKVDEKYIHEIDVDETVMVDNVEVTAIEANHCPGAVMFFFKLSSGEC 399
Query: 501 VLHTGDFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAIQ 555
+LHTGDFR EM S+ + I L LDTTY N Y+F Q + + V I+
Sbjct: 400 ILHTGDFRACSEMESLPLFWNNTNIDLLYLDTTYLNKNYNFCHQSESVDRALHLVGAFIE 459
Query: 556 AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
F + L + GSY IGKE+++L +A K++ +++ + CL + +D+Q T+
Sbjct: 460 KNPFK-RILIVCGSYVIGKEKIWLALAEAFSLKVWTESSRSDAISCLGW--DDLQVVLTD 516
Query: 616 E-HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQG 674
+ ++++HV+PM + S+ L +Q+ ++ +++ P+GW K K S G++
Sbjct: 517 DPTKANLHVIPMGKI-SYPSLVEYFSQFEDQYDMLLGIRPSGW--EKNSKPSFGKK---- 569
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
I + YSEH S+ EL+ FV+F+ P+ +I +V GRD
Sbjct: 570 -ISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV-GRD 607
>gi|195062921|ref|XP_001996278.1| GH22402 [Drosophila grimshawi]
gi|193899773|gb|EDV98639.1| GH22402 [Drosophila grimshawi]
Length = 623
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/341 (35%), Positives = 192/341 (56%), Gaps = 15/341 (4%)
Query: 379 AAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHH 437
A ++ KGRK K P++ V T F VD F++ + +H+FL+H+H DHY GLTR F H
Sbjct: 230 AKENIPKGRKRKRCPSYKIVEDTTFVVDGFQFGNIPNATHYFLSHYHADHYVGLTRKFAH 289
Query: 438 GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN 497
+Y S ITARLV I I + + +++ + I+VT ++ANHCPG+I++LF+
Sbjct: 290 -PLYMSPITARLVEKFIPIDSQFVHEIDVDKSVVVKDIEVTAIDANHCPGAIMLLFKFST 348
Query: 498 GKAVLHTGDFRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
GK +LHTGDFR S EM S+ + P I L LDTTY YDF Q I +Q
Sbjct: 349 GKCILHTGDFRASFEMESLPIFWNEPNIDLLYLDTTYLAKNYDFCHQSDSIYSACSLVQK 408
Query: 557 ---ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
++ + + L + GSY IGKE+++L +A +++ + + + CL++ + + +
Sbjct: 409 FHEKNASKRILHVCGSYLIGKEKVWLALAEEFGLRVWTEPHRRKAIDCLNWPELQL-VLS 467
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ ++++HV+ M + S+ +L Q+ +F +++ P+GW K K S G+R
Sbjct: 468 DDPFDANLHVIGMGKI-SYPQLDQYFKQFESQFDMLLGIRPSGW--EKNSKPSYGKR--- 521
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
I V YSEH S+ EL+ FV+F+ P ++I +V RD
Sbjct: 522 --ISVIGVEYSEHSSYKELERFVRFLKPTNVISTVPVQPRD 560
>gi|212721348|ref|NP_001131576.1| uncharacterized protein LOC100192920 [Zea mays]
gi|194691900|gb|ACF80034.1| unknown [Zea mays]
Length = 280
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 161/271 (59%), Gaps = 5/271 (1%)
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
M + + D + L L+ + I G+ VT LEANHCPG+ +I F +GK LHTGDFR S+
Sbjct: 1 MCLSVNSDYICPLELDTEYVIEGVTVTLLEANHCPGAALIHFRLSDGKTCLHTGDFRASK 60
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNPKTLFLIGSY 570
M S +LQ ++ + LDTTYCNP Y FP QE VI FV+ + PKTL ++G+Y
Sbjct: 61 TMQSHPLLQRGRVNLVYLDTTYCNPKYKFPPQEDVIDFVVRTTRRYLKKQPKTLIVVGAY 120
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+IGKE ++L +++ L IY +A++ R+L + + + N+ S +HV+P+ ++
Sbjct: 121 SIGKENVYLAISQALEAHIYTDASRRRILYSFGWPDLSKRLCSCNQ-SSSLHVLPLGSI- 178
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPGRRWQQGTIIRYEVPYSEHCS 688
+ + LK GRF ++AF PTGWTFS+ GK + + Y VPYSEH S
Sbjct: 179 NHENLKKYLETLNGRFLAVLAFRPTGWTFSEATGKHLDLIKPSSNANVTIYGVPYSEHSS 238
Query: 689 FTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
FTEL++FV F+ P+ IIP+VN S + M
Sbjct: 239 FTELRDFVMFLKPQKIIPTVNVGNATSRDKM 269
>gi|195501976|ref|XP_002098027.1| GE10135 [Drosophila yakuba]
gi|194184128|gb|EDW97739.1| GE10135 [Drosophila yakuba]
Length = 740
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/347 (34%), Positives = 197/347 (56%), Gaps = 25/347 (7%)
Query: 380 AKDQSKG-----RKHKDIPTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGL 431
AK+ KG ++ K P + V GT F VD F++ GD +H+FLTHFH DHY GL
Sbjct: 250 AKNSKKGTGRKEKRPKPCPPYKVVEGTTFCVDGFQF--GDIDRVTHYFLTHFHADHYIGL 307
Query: 432 TRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIII 491
T+ F + +Y S TARLV I I + + ++Q T+ G++VT LEANHCPG+++
Sbjct: 308 TKKFCY-PLYVSPTTARLVRTFIKIDETYIYEIDVDQTLTVDGVEVTALEANHCPGALMF 366
Query: 492 LFEPQNGKAVLHTGDFRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFV 550
F+ ++G+ +LHTGDFR S +M S+ + I L LDTTY N YDF Q +
Sbjct: 367 FFKLRSGECILHTGDFRASADMESLPIFWNHANIDLLYLDTTYLNKNYDFCHQSESVDRA 426
Query: 551 IEAIQA---ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
++ ++ ++ + + L + GSY IGKE+++L +A+ +++ + + ++CL + +
Sbjct: 427 VDLVRVFLEKNASKRILIVCGSYVIGKEKIWLALAKEFNLRVWTESNRSTAVRCLKWPEL 486
Query: 608 DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP 667
D T + E+++HV+ M + S+ L + + ++ +++ P+GW K K S
Sbjct: 487 D-SVLTEDPREANLHVVAMGKI-SYPSLVDYFSLFEDQYDMLLGIRPSGW--EKNTKPSY 542
Query: 668 GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
G+R I + YSEH S+ EL+ FV+F+ P+ +I +V GRD
Sbjct: 543 GKR-----ISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV-GRD 583
>gi|320167046|gb|EFW43945.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1559
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 173/351 (49%), Gaps = 66/351 (18%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FL+HFH DHY GLT+++ ARLV + + ++ L N TI + V
Sbjct: 108 FFLSHFHADHYAGLTKTWR---------AARLVIKVLEVDERMIRPLEFNTPVTIDNVQV 158
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC--PIHTLILDTTYCN 535
T ++ANHCPG+ ++LF+ NG LHTGDFR+ M L I TL LDTTYCN
Sbjct: 159 TLMDANHCPGAAMMLFKVSNGLVYLHTGDFRYHPRMNDYPALIQAQNQIETLFLDTTYCN 218
Query: 536 PLYDFPKQEAVIQFVIEAI---QAESFNP------------------------------- 561
P Y P Q+A I FV E + P
Sbjct: 219 PKYTLPAQDAPIDFVAETVFNMMRSELQPAGDNAALPPAPKRVKLSVDDDDAAAHESQRL 278
Query: 562 ---------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
KTLFLI SY IGKERL++EV+R KI V+ K VL + D+ F
Sbjct: 279 ASDGDFSRVKTLFLIASYVIGKERLYVEVSRRCGCKIVVDERKHAVLALQE--GIDMSMF 336
Query: 613 TTNEHESHIHVMP--MWTL-ASFKRLKHMSNQYAGRFSLIVAFSPTGW--TFSKGKKKSP 667
+ + +S +HVM W A+ L M YA RF +VAF PTGW TF +
Sbjct: 337 SLDWRDSPVHVMAPGGWRFNANHSLLTKMLAHYAPRFDRLVAFLPTGWTYTFKYATTSAK 396
Query: 668 GRRW---QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDS 715
G ++ Q+ I Y +PYSEH SFTEL++FV F+ P+ I+P+V GRD+
Sbjct: 397 GVKYSLEQRDNIQVYSIPYSEHSSFTELRQFVSFLHPKRIVPTVV--GRDA 445
>gi|237838189|ref|XP_002368392.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49]
gi|211966056|gb|EEB01252.1| DNA cross-link repair protein, putative [Toxoplasma gondii ME49]
gi|221484335|gb|EEE22631.1| SNM1 protein, putative [Toxoplasma gondii GT1]
gi|221505686|gb|EEE31331.1| SNM1 protein, putative [Toxoplasma gondii VEG]
Length = 404
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 114/314 (36%), Positives = 167/314 (53%), Gaps = 26/314 (8%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVL 464
VD F+ + +FL+HFH DHY GL+ S+ G +YCS++TARL+ + + ++ L
Sbjct: 25 VDTFRKVPKGSFVFFLSHFHADHYSGLSSSWSRGVVYCSVLTARLIITFLRVNKALVRGL 84
Query: 465 PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPI 524
L+ + IA VT L+ANHCPG+++ L + + GK LHTGDFR+ M L C I
Sbjct: 85 DLDTEYEIADARVTLLDANHCPGAVMFLCKTKGGKTYLHTGDFRYDRHMVDHPALANCHI 144
Query: 525 HTLILDTTYCNPLYDFPKQEAVIQF---VIEAIQAESFNP-KTLFLIGSYTIGKERLFLE 580
T+ LDTTY P Y+F Q IQ V E + ES P + LFL+GSYTIGKE++ L
Sbjct: 145 DTVFLDTTYGRPEYEFEPQVDTIQRAVNVAEEVCKESKQPGRVLFLVGSYTIGKEKIALA 204
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
++ ++ + + R+L CL + + IH++PM T
Sbjct: 205 LSETFGWTVFASGKRRRILDCLQLEQLRDGGLGDDPATCCIHIVPMNT------------ 252
Query: 641 QYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVS 700
+AF PTGW+F+ K G I + + YSEH S+TELKEFV +
Sbjct: 253 ---------IAFLPTGWSFTSKWNKEHS-SMSSGCITVHLLEYSEHSSYTELKEFVNHLR 302
Query: 701 PEHIIPSVNNDGRD 714
P +IP+V ++ +D
Sbjct: 303 PNQVIPTVYSNQKD 316
>gi|384487503|gb|EIE79683.1| hypothetical protein RO3G_04388 [Rhizopus delemar RA 99-880]
Length = 410
Score = 195 bits (495), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 190/381 (49%), Gaps = 60/381 (15%)
Query: 400 GTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
GT VDAF + R +C +FL+HFH DHY L + HG IYCS IT+RLV K+ +P
Sbjct: 12 GTNLVVDAFSFGRIPECEGYFLSHFHGDHYTNLNAGWTHGPIYCSEITSRLVQKKLRVPS 71
Query: 459 DRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIIL-FEPQNGKA---VLHTGDFRFSE 511
+ ++ LPLN+ I G D VT ++ANHCPG+++ L PQ LHTGDFR +
Sbjct: 72 NFIRPLPLNRSCLIPGTDNVSVTLIDANHCPGAVMFLCVVPQTDSPPLRYLHTGDFRACK 131
Query: 512 EMASMSVL---QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA------------ 556
EM +L + PI L LDTTY + Y FP Q IQ + ++
Sbjct: 132 EMCLHPLLKQPENPPIDILYLDTTYLDHKYSFPSQTTCIQLACDVVERHINHNGDNQLSN 191
Query: 557 -------------ESFNPKTLFLIGSYTIGKERLF---LEVARVLRKKIYVNAAKFRVLK 600
+ KT+ ++G+Y++GKER+F L +A+ L+ KI+V K +L
Sbjct: 192 MDHLLTQKKELKNKKIIQKTVVVVGTYSLGKERIFIISLGIAKKLKSKIFVTDRKMEILS 251
Query: 601 CLDFSKEDIQWFTTNE-HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
C F +++ T+E E+ +HV+P+ + + L+ F+ +VAF PTGWTF
Sbjct: 252 C--FGDDELMKMLTDEPKEAQVHVIPLGHILP-ENLEAYIRSLQPHFTQMVAFKPTGWTF 308
Query: 660 SKGKKK---------SPG--------RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPE 702
+ S G ++ T+ YE+PYSEH SF EL F+ +
Sbjct: 309 RTSSLEQDRSLDAIISAGAADMTVLKSSYESLTLKIYEIPYSEHSSFRELALFIASLDIR 368
Query: 703 HIIPSVNNDGRDSANAMVSLL 723
I+P+VN S M SL
Sbjct: 369 RIVPTVNVHNEKSRAKMGSLF 389
>gi|315046636|ref|XP_003172693.1| hypothetical protein MGYG_09076 [Arthroderma gypseum CBS 118893]
gi|311343079|gb|EFR02282.1| hypothetical protein MGYG_09076 [Arthroderma gypseum CBS 118893]
Length = 848
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 200/418 (47%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
++ S+G++ + P + +PG VDAF+Y + G CS +FL+H+H DHY GLT S+
Sbjct: 397 EEASRGKQAYERTCPFYKILPGFSVTVDAFRYGAIEG-CSAYFLSHYHSDHYGGLTSSWS 455
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILF 493
HG IYCS +TA LV +I + D + L QKT I G D VT + ANHCPGS + LF
Sbjct: 456 HGPIYCSSVTANLVKQQINVKADMVVELEFEQKTEIPGTDGASVTMITANHCPGSSLFLF 515
Query: 494 EPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYC 534
E NGK +LH GDFR S + +L+ + L LDTTY
Sbjct: 516 EKPNGKGNNARVHRILHCGDFRASSSHINHPLLRPNIMDPLTGQLTQQKIDVCYLDTTYL 575
Query: 535 NPLYDFPKQEAVIQF--------------VIEAIQAES--------FNP----------- 561
NP Y FP Q+ VI ++A + ++ F P
Sbjct: 576 NPKYAFPFQQDVINACAQMCAGVNEGYFTTLDAGKGQTKKSGFMTPFLPNSQSSDRTSAS 635
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K L +IG+Y+IGKER+ L VAR L KIYV+ K R+ +CL+ K T++
Sbjct: 636 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKRRICECLEDDKLS-SILTSD 694
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF---SKGKKKSP----- 667
++ +H+ + + S + L ++ RFS I+ PTGW++ + SP
Sbjct: 695 PLDAQVHMHSLMDMRS-ETLSEYLKSFSSRFSRIIGIRPTGWSYRPRGGTRTDSPPVSAV 753
Query: 668 --GRRW-----------QQGT---IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + + VPYSEH SF EL F + IIP+VN
Sbjct: 754 LYSEAWKPRFSVNDLVPQRGSTNEVACFSVPYSEHSSFRELTMFCCALRISRIIPTVN 811
>gi|390178816|ref|XP_001359351.3| GA10012 [Drosophila pseudoobscura pseudoobscura]
gi|388859601|gb|EAL28496.3| GA10012 [Drosophila pseudoobscura pseudoobscura]
Length = 787
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 212/402 (52%), Gaps = 36/402 (8%)
Query: 321 RHKEASK--VIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKH 378
R+K A++ V+ G+S P NK G + + + P N + S K
Sbjct: 283 RNKRANRRGVLAAGTSPPIPNKK------GFLAPLPVPNEPGNPDTSSEK---------- 326
Query: 379 AAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHH 437
A + K R K P + V GT F VD F++ + +H+FLTHFH DHY GLT+ F
Sbjct: 327 IASNGRKQRTPKPCPPYKVVEGTHFCVDGFQFGVIPGVTHYFLTHFHADHYIGLTKKFAF 386
Query: 438 GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN 497
++ S +TARLV I I + + ++Q + I +T +EANHCPG+++ F+ +
Sbjct: 387 -PLFMSPLTARLVQAFIKIDEMYIHEIDVDQTILVDNIQITGIEANHCPGALMFFFKLSS 445
Query: 498 GKAVLHTGDFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
G+ +LHTGDFR S EM S+ + I L LDTTY + YDF Q + + +Q
Sbjct: 446 GECILHTGDFRASFEMESLPIFWNNIDIDLLYLDTTYLSGNYDFCHQTESVDRAVYMVQK 505
Query: 557 -ESFNP--KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ-WF 612
NP + L++ GSY IGKE+++L +A ++ A + + CL++ D+Q
Sbjct: 506 FHERNPGKRILYVCGSYVIGKEKIWLTLAEKFSLTVWTEAHRRMAIDCLEWP--DLQSRL 563
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
+ +++++HV+ M + ++ L Q+ ++ +++A P+GW K K S GRR
Sbjct: 564 NDDPYQANLHVIGMGKV-TYLVLAEYFKQFEDQYDMLLAIRPSGW--EKNSKPSYGRRI- 619
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
+II E YSEH S+ EL+ FV+F+ P II +V GRD
Sbjct: 620 --SIIGIE--YSEHSSYKELERFVRFIKPRRIISTVPV-GRD 656
>gi|134078210|emb|CAK40289.1| unnamed protein product [Aspergillus niger]
Length = 809
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 207/441 (46%), Gaps = 87/441 (19%)
Query: 360 TNGQSGSRKSFS------GSDRKKHAAKDQ---SKGRK--HKDIPTWCCVPGTPFRVDAF 408
+G +G+R +FS D AA S+G++ + P + +PG VDAF
Sbjct: 359 ASGVAGTRSAFSKLMAGNAEDTAWSAAAANEVASRGKQAYQRTCPFYKIIPGFSLCVDAF 418
Query: 409 KY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPL 466
+Y + G C+ +FL+HFH DHY GLT S+ HG IYCS TA LV ++ + DR ++PL
Sbjct: 419 RYGAVEG-CNAYFLSHFHSDHYIGLTGSWRHGPIYCSRPTANLVCQQLKV--DRKWLVPL 475
Query: 467 N--QKTTI---AGIDVTCLEANHCPGSIIILFEPQNGKA-------VLHTGDFRFSEEMA 514
+KT I G VT +EANHCPGS I LFE G VLH GDFR S
Sbjct: 476 EFERKTEIPDTGGAQVTLIEANHCPGSAIFLFEKSMGSGPSQRTHRVLHCGDFRASPLHV 535
Query: 515 SMSVLQ------------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-----QAE 557
++L+ I LDTTY +P Y FP QE VIQ E A
Sbjct: 536 QHALLRPEIADPATGKARQQRIDACYLDTTYLSPKYAFPGQEDVIQACAELCVELDGDAN 595
Query: 558 SFNPKT------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
N + L +IG+Y+IGKER+ L +AR L+ KIY AK RV CL+ E
Sbjct: 596 DTNGRARPPGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKQRVCACLE-DAELSSL 654
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR- 670
T + E+ +H+ ++ + + + L + F+ +V F PTGWT+ + P R
Sbjct: 655 LTDDPTEAQVHMQTLFEIRA-ETLADYLDSMKPHFTRVVGFRPTGWTY-----RPPAGRM 708
Query: 671 --------------W-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPE 702
W Q+G+ + VPYSEH SF EL F +
Sbjct: 709 LDNPPVSVVLNSAHWKTPFSAKDLVPQRGSTRESACFGVPYSEHSSFRELSMFCCALRIG 768
Query: 703 HIIPSVNNDGRDSANAMVSLL 723
+IP+VN R S M + +
Sbjct: 769 RVIPTVNVGSRKSRERMKAWI 789
>gi|294898790|ref|XP_002776376.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
gi|239883314|gb|EER08192.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
Length = 388
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 175/323 (54%), Gaps = 26/323 (8%)
Query: 398 VPGT--PFRVDAFKY---LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
+PG F VD F LR D +FLTHFH DH GLT+ F G IYCS ITA LV
Sbjct: 25 IPGQTEAFVVDGFGVPVRLRQDSRTYFLTHFHGDHTWGLTKGFCRGTIYCSPITAELVIQ 84
Query: 453 KIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
IG+ R+ L L + T IAG+ VTCL+ANHCPG+++ LF G LHTGDFR
Sbjct: 85 IIGVDPSRVVRLELGEPTEIAGVKVTCLDANHCPGAVMFLFCGAGGWTGLHTGDFR---- 140
Query: 513 MASMSVLQTCP----IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
AS ++L+T P I+T+ LDTTY + + P +E + + + E+ P T+F++G
Sbjct: 141 -ASTALLKTVPAYGVINTVWLDTTYSDRRFVHPSREEALDMISRIVTKEN-EPGTMFVVG 198
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM-PMW 627
Y +GKE + ++ VL KKI+V + ++++ E + E E + V M
Sbjct: 199 GYRLGKESCAVRISEVLGKKIFVPKKRRKIMEICGAIPEKL----IAEKEDYGVVFDAMG 254
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ S +++ +S +V F TGWT +K+S R + + Y +PYSEH
Sbjct: 255 RIGSSP--DSLADYLDAGYSKVVGFRCTGWT----RKESCWRSSKFPGCVLYSIPYSEHS 308
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
SFTEL EF+K V P +I +V
Sbjct: 309 SFTELVEFLKHVQPRRVIGTVGK 331
>gi|294955916|ref|XP_002788744.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
gi|239904285|gb|EER20540.1| DNA cross-link repair protein SNM1, putative [Perkinsus marinus
ATCC 50983]
Length = 388
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 181/344 (52%), Gaps = 26/344 (7%)
Query: 377 KHAAKDQSKGRKHKDIPTWCCVPGT--PFRVDAFKY---LRGDCSHWFLTHFHMDHYQGL 431
K + KG+K +PG F VD F LR D +FLTHFH DH GL
Sbjct: 4 KRSLAGLDKGKKEWAYKVITEIPGQTEAFVVDGFGVPVRLRQDSRTYFLTHFHGDHTWGL 63
Query: 432 TRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIII 491
T+ F G IYCS ITA LV IG+ R+ L L + T IAGI VTC++ANHCPG+++
Sbjct: 64 TKGFCRGTIYCSPITAELVIQVIGVDPSRVVKLELGEPTEIAGIKVTCIDANHCPGAVMF 123
Query: 492 LFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP----IHTLILDTTYCNPLYDFPKQEAVI 547
LF G LHTGDFR AS ++L+T P I+T+ LDTTY + + P +E +
Sbjct: 124 LFCGTGGWTGLHTGDFR-----ASAALLKTVPAYGVINTVWLDTTYSDRRFVHPSREEAL 178
Query: 548 QFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
+ + E+ P T+F++G Y +GKE + ++ VL KKI+V + ++++ E
Sbjct: 179 DMISRIVTKEN-EPGTMFVVGGYRLGKESCAVRISEVLGKKIFVPKKRRKIMEICGAIPE 237
Query: 608 DIQWFTTNEHESHIHVM-PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
+ E E + V M + S +++ +S +V F TGWT +K+S
Sbjct: 238 KL----IAEKEDYGVVFDAMGRVGSSP--DSLADFLDAGYSKVVGFRCTGWT----RKES 287
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
R + + Y +PYSEH SFTEL EF+K V P +I +V
Sbjct: 288 CWRSSKFPGCVLYSIPYSEHSSFTELVEFLKHVQPRRVIGTVGR 331
>gi|167523435|ref|XP_001746054.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775325|gb|EDQ88949.1| predicted protein [Monosiga brevicollis MX1]
Length = 893
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 183/381 (48%), Gaps = 61/381 (16%)
Query: 397 CVPGTPFRVDAFKYLR--GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
VPGT F VD F+ + +FL+H+H DHY GL + G IY S TARLV +
Sbjct: 9 VVPGTGFLVDCFRDKKKIAAGQKFFLSHYHADHYGGLNDKWAAGPIYASPPTARLVIDFL 68
Query: 455 GIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAV------LHTGDFR 508
+ + LP ++ TI ++VT ++ANHCPG+ ++LF +N A LHTGD R
Sbjct: 69 EVDPKWIHELPFDETHTIDDVEVTLMDANHCPGAAMLLFGVRNQHAPEQRMYHLHTGDCR 128
Query: 509 FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA--ESFNPKTLFL 566
F M LQ I L LDTTY NP Y FP QE I+F I A E+ +TL L
Sbjct: 129 FHPRMLDHPTLQGIHIENLYLDTTYANPKYTFPPQEDTIEFCARTIAAELEAHRGRTLVL 188
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK-CLD-------FSKEDIQWFTTNEHE 618
+ +Y+IGKE++ L ++ ++ V K+++L CL F+ E + T
Sbjct: 189 VATYSIGKEKILLRAHELVGARVEVTERKWKMLNHCLPIANLETIFTTEHLPAHVTTTQA 248
Query: 619 SHIHVMPM----------WT-LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK---- 663
+ + ++ WT L + +L M + YA RF IVAF PTGWT++ +
Sbjct: 249 ASVRIVGWHELGNMAPGGWTFLPDYPKLHEMLDFYASRFDRIVAFYPTGWTYTLSQAVRE 308
Query: 664 ------KKSPGRRWQQGT----------------------IIRYEVPYSEHCSFTELKEF 695
+S + + + + Y VPYSEH SF EL+
Sbjct: 309 RQAITASQSHAQTLAEASTEARAHLTARPAVLHAAETKNKVTVYTVPYSEHSSFDELRAL 368
Query: 696 VKFVSPEHIIPSVNNDGRDSA 716
V + P +++P+V RD++
Sbjct: 369 VSGIRPTNVVPTVLGGARDTS 389
>gi|302847337|ref|XP_002955203.1| hypothetical protein VOLCADRAFT_96136 [Volvox carteri f. nagariensis]
gi|300259495|gb|EFJ43722.1| hypothetical protein VOLCADRAFT_96136 [Volvox carteri f. nagariensis]
Length = 1266
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 162/318 (50%), Gaps = 60/318 (18%)
Query: 379 AAKDQSKGRKHKDIPTWCCVPGTPFRVDAF----KYLRGDCSHW-FLTHFHMDHYQ---- 429
A + GR + +P +PGT VD F K + S + LTHFH DHY+
Sbjct: 786 AGGARPSGRLPRWVPECHTLPGTRILVDFFGPSSKSITAAVSPFRILTHFHADHYKAPKE 845
Query: 430 -------------------------------GLTRSFHHGKIYCSLITARLVNMKIGIPW 458
GLTRSF G + S +TARLV+ ++ +P
Sbjct: 846 KPRLHNVQHSAIRTEITVFRKPSPHRIPYLKGLTRSFAGGTVLASPVTARLVSERLKLPA 905
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNG-KAVLHTGDFRFSEEMASMS 517
RL+ LP++ + G+ +T ++ANHCPG+ +++ +P G VLHTGD R + M +
Sbjct: 906 ARLRTLPMDTPVEVDGVCLTLVDANHCPGAAMVVAQPPGGWPPVLHTGDCRLGDHMRNHP 965
Query: 518 VLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+Q TL+LDTTYC+P Y+FP Q AV+ V+EA++AESFN + LF+ G+YTIGKE
Sbjct: 966 AMQLLVGRRCTLVLDTTYCDPQYEFPPQRAVLDAVLEAVKAESFNKRALFVFGTYTIGKE 1025
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
RLFLEVA + +K+Y + K L + TTN E++IH
Sbjct: 1026 RLFLEVAAAMGQKVYCSKEKAATLAACGLAPRYASLITTNHLEANIHA------------ 1073
Query: 636 KHMSNQYAGRFSLIVAFS 653
QY GR+S ++ FS
Sbjct: 1074 -----QYRGRYSAVIGFS 1086
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANA--MVSLLLN 725
R VPYSEH SF EL+ FV ++ P I+PSVN DG M+ LLL
Sbjct: 1176 REPVPYSEHSSFGELRSFVSWLQPGRIVPSVNADGPAGPRTRRMLQLLLG 1225
>gi|63054513|ref|NP_593231.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe 972h-]
gi|19862928|sp|Q10264.3|PSO2_SCHPO RecName: Full=DNA cross-link repair protein pso2/snm1
gi|159883918|emb|CAA93588.2| DNA 5' exonuclease (predicted) [Schizosaccharomyces pombe]
Length = 560
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 183/356 (51%), Gaps = 30/356 (8%)
Query: 392 IPTWCCVP-GTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+P + +P PF VDAF Y D +FL+HFH DHY GLT + HG IYCS +T L
Sbjct: 183 VPFYKLMPYNIPFAVDAFAYGAIDGVEAYFLSHFHSDHYGGLTPKWKHGPIYCSEVTGNL 242
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE---PQNGKAVLHTGD 506
+ + + ++ L LNQ I GI V L+ANHCPGS + +FE + VLH GD
Sbjct: 243 LINVMHVDEQYVKRLKLNQPYNIMGITVYVLDANHCPGSAMFVFETLQSNQTRRVLHCGD 302
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQ-AESFNPKTL 564
FR S++ VL+ IH + LDTTY NP Y FP Q V+Q + AI +S + + L
Sbjct: 303 FRASKDHVMHPVLREKTIHKVYLDTTYLNPKYTFPPQADVVQACADKAISIKKSTDSRLL 362
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
++ +Y+IGKE++ + +A+ L +IYV K ++K L+ +++ I T + ++ +H++
Sbjct: 363 VVVSTYSIGKEKVAVAIAKSLSSRIYVVPRKMHIIKQLE-NQDLIDLLTDDPTQASVHMV 421
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP----------------- 667
M + L ++ QY F I+ + TGWTF + ++
Sbjct: 422 TMMGIHPNSLLDYLE-QYNSSFDKIIGYKVTGWTFQPLENRAQLSSSLDSIISRPPKFVE 480
Query: 668 ----GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
R + + PYSEH SF +L F ++ HIIP+VN + S M
Sbjct: 481 YDLRAIRGSTDKVAAFVAPYSEHSSFYDLTMFCLSMNIGHIIPTVNVGSQRSREKM 536
>gi|145351984|ref|XP_001420339.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580573|gb|ABO98632.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 368
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 117/336 (34%), Positives = 184/336 (54%), Gaps = 34/336 (10%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF----HHGKIYCSLITARLVNMKIGIPWDR 460
VD F + D + LTHFH DHY GL+ SF KIYCS ITARLV +G+ +R
Sbjct: 21 VDGFAFQSPDVRCYVLTHFHADHYCGLSGSFGKDGDEAKIYCSEITARLVVEFLGVKRER 80
Query: 461 LQVLPLNQKTTIAG-------IDVTCLEANHCPGSIIILFEPQ-NGKAVLHTGDFRFSEE 512
+ L + TT+ G ++ T ++ANHCPG+ ++ F + G+ +LHTGDFR +
Sbjct: 81 VVGCELGRGTTLRGAGTRGDDVEATFVDANHCPGACLVFFRNKITGETLLHTGDFRAAAR 140
Query: 513 MAS----MSVLQTC---PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNPKTL 564
+ + +L TC + ++LDTTYC + FP Q+ V+ + + + E + P+TL
Sbjct: 141 VRNDGTLRELLTTCRDGSVDEVMLDTTYCEKKWTFPDQDVVLNKMRQIARDELAREPRTL 200
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES----H 620
FL GSY+IGKER V + + + V A + + L+ + ++D ++ E
Sbjct: 201 FLCGSYSIGKERAIQAVCQGAQSRASVTARRKKSLELSGWWRDDAFVCEDDDAEEAARCQ 260
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK-----GKKKSPGRRW--QQ 673
+ V + ++ + + + + A R+ VAFSPTGW+++K G +P W +
Sbjct: 261 VRVCGLGKGSNHRAMMEIMAKEAPRWRAAVAFSPTGWSYTKKMDEDGFNVNP---WIENE 317
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
G Y +PYSEH S+TEL+EF+KF+ P+ I P+VN
Sbjct: 318 GRTRTYAIPYSEHSSYTELREFIKFLKPKKITPTVN 353
>gi|326430673|gb|EGD76243.1| hypothetical protein PTSG_11661 [Salpingoeca sp. ATCC 50818]
Length = 1437
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 189/372 (50%), Gaps = 55/372 (14%)
Query: 397 CVPGTPFRVDAF---KYLRGDC-SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
VP TP VD F KY R + + +FL+HFH DHY L + + G +YCS TA+LV
Sbjct: 5 AVPFTPIVVDHFNDKKYHRRESGTLFFLSHFHADHYGKLNKDWQWGPVYCSQTTAKLVAA 64
Query: 453 KIGIPWDRLQVLPLNQKTTI-AGIDVTCLEANHCPGSIIILF---EPQNG--KAVLHTGD 506
+ + + L+ LPL+ + A V ++ANHCPG+ + LF E + G LH+GD
Sbjct: 65 VLEVDANYLRPLPLDTWVDVTATCRVALIDANHCPGAAMFLFHVRETEGGLEHWYLHSGD 124
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-------QAESF 559
R++ +LQ + L LDTTYC+P + FP QE V++FV + + Q +
Sbjct: 125 CRYTPAWKQHPLLQNVALDILFLDTTYCDPKHTFPPQEQVVRFVSDTVSQYMHEDQQRAD 184
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW-------F 612
TLFL+ +Y++GKE++ ++ + K + V+ K +++ L D+ W F
Sbjct: 185 GVDTLFLVATYSVGKEKILTQLVKDQHKPLVVSEKKRLMMQQL-----DLDWPVPFDEMF 239
Query: 613 TTNEHESHIHVMPM----------WT-LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK 661
T++ S++HV+ WT L ++ L M + Y R+ IVAF PTGWT+
Sbjct: 240 TSDHLASNVHVVGWHMLGTMAAGGWTFLPDYETLHDMIDHYKPRYHRIVAFVPTGWTYVI 299
Query: 662 GKKKSPGRRWQQG---------------TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIP 706
K+ + Q + + VPYSEH ++ EL+EFV ++ P ++P
Sbjct: 300 AKEHQRRQALAQHDEEVLGVLHHKETKRNVTVFTVPYSEHSNYLELREFVAWLKPARVVP 359
Query: 707 SVNNDGRDSANA 718
+V GR S A
Sbjct: 360 TVIGGGRSSNKA 371
>gi|195451117|ref|XP_002072775.1| GK13503 [Drosophila willistoni]
gi|194168860|gb|EDW83761.1| GK13503 [Drosophila willistoni]
Length = 652
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 183/324 (56%), Gaps = 15/324 (4%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
K P + V GT F VD F++ + + +H+FL+H+H DHY GLTR F IY S TAR
Sbjct: 220 KPCPPYKIVEGTNFCVDGFQFGVIPNVTHYFLSHYHADHYIGLTRKFSLP-IYMSPTTAR 278
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
LV I + + + ++Q I I++T ++ANHCPG+++ F+ +G+ +LHTGDFR
Sbjct: 279 LVRTFIKLDDIYINEIDVDQTIIIDNIEITAIDANHCPGALMFFFKLSSGQTILHTGDFR 338
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA---ESFNPKTL 564
+ EM S+ + P + L LDTTY N YDF Q I + ++ + + + L
Sbjct: 339 ANFEMESLPIFWNNPQLDVLYLDTTYLNKNYDFSHQSESIDRAVSLVKEFHNKHKDKRIL 398
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
+ G+Y IGKE+++L VA+ + K++ + + CL + + + +E+++HV+
Sbjct: 399 HVCGAYVIGKEKIWLTVAKEFKLKVWTEPHRRAAIDCLHLPDAE-TYLYDDPNEANLHVI 457
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
+ + S+ L + Y ++ +I+A P+GW K +K S G+R ++I E YS
Sbjct: 458 GLGQI-SYPSLVQYFDLYQDKYDMILALRPSGW--EKNRKPSYGKRI---SVIGIE--YS 509
Query: 685 EHCSFTELKEFVKFVSPEHIIPSV 708
EH S+ EL+ FV+F+ P +I +V
Sbjct: 510 EHSSYKELERFVRFLKPRKVISTV 533
>gi|115401818|ref|XP_001216497.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
gi|114190438|gb|EAU32138.1| hypothetical protein ATEG_07876 [Aspergillus terreus NIH2624]
Length = 957
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 247/537 (45%), Gaps = 95/537 (17%)
Query: 269 EDLIGIGVTALGPR-KKILHTLCEIKKEYSRAVESNKDAHVSN--DGSSSYHGSERHK-- 323
EDL GI + + P + IL +CE E S E+N HV++ DG + ++ +
Sbjct: 407 EDL-GIEGSPVEPGGESILCPVCET--ELSGLSEANASMHVNDCLDGKTRTVSTDAGETV 463
Query: 324 EASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQ 383
E D ++ P A + D + S + K S + +G+ + + ++ + +
Sbjct: 464 EPPATARDRAAVPRAAQ--KDPY--SSASTKPNSAFSRLMAGNAEDTAWAEAAANEVASR 519
Query: 384 SKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYC 442
K + P + + G VDAF+Y D CS +FL+HFH DHY GLT S+ HG IYC
Sbjct: 520 GKQAYQRTCPFYKIITGFSICVDAFRYGAVDGCSAYFLSHFHSDHYVGLTSSWKHGPIYC 579
Query: 443 SLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQNG- 498
S TA LV ++ + L L + T + G+ VT ++ANHCPGS + LFE G
Sbjct: 580 SRATANLVRQQLKVDARWLVGLEFERTTEVPGTGGVQVTLIDANHCPGSALFLFEKPTGP 639
Query: 499 ------KAVLHTGDFRFS----------EEMASMSVLQTCP--IHTLILDTTYCNPLYDF 540
+ VLH GDFR S E+ + Q P I LDTTY NP Y F
Sbjct: 640 NPGSRLQRVLHCGDFRASPTHIQHHLLRPEIVDSTTGQKRPQRIDVCYLDTTYLNPKYGF 699
Query: 541 PKQEAVIQFVIE-AIQAE-------------------------------SFNPKT--LFL 566
P Q+AVIQ E +++ + S PK L +
Sbjct: 700 PSQDAVIQACAELSVRLDKGPEDGAMSWLTRGVNGMMGKFLSSGKSTDGSSRPKGRLLVV 759
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
+G+Y+IGKER+ L +AR L+ KIY AAK RV CL+ +E T N ++ +H+ +
Sbjct: 760 VGTYSIGKERICLGIARALKSKIYATAAKQRVCACLE-DEELSSLLTDNPRDAQVHMQTL 818
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS--KGKK-KSP-------GRRWQQGTI 676
+ + + + L + F+ +V F PTGW++ KG++ ++P +WQ
Sbjct: 819 FEIRA-ETLTDYLDSLKPHFTRVVGFRPTGWSYRPPKGRELENPPVSTVLHSAQWQTPFT 877
Query: 677 IR--------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ + VPYSEH SF EL F + +IP+VN R S M
Sbjct: 878 VEDLLPQRGSTSESACFGVPYSEHSSFRELTMFCCALRIGRVIPTVNVGSRKSRERM 934
>gi|296805702|ref|XP_002843675.1| DNA cross-link repair protein pso2/snm1 [Arthroderma otae CBS
113480]
gi|238844977|gb|EEQ34639.1| DNA cross-link repair protein pso2/snm1 [Arthroderma otae CBS
113480]
Length = 853
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 192/424 (45%), Gaps = 101/424 (23%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A ++ S+GR+ + P + +PG VDAFKY + G CS +FL+H+H DHY GLT S
Sbjct: 402 AREEASRGRQAYERTCPFYKILPGFSITVDAFKYGAIEG-CSAYFLSHYHSDHYGGLTSS 460
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIII 491
+ HG IYCS ITA LV +I + D + L ++T I G D VT + ANHCPGS +
Sbjct: 461 WSHGPIYCSKITANLVKQQIKVSPDMVFELEFEKRTEIPGTDGVSVTMITANHCPGSSLF 520
Query: 492 LFEPQ--NGKA-----VLHTGDFRFSEEMASMSVLQ------------TCPIHTLILDTT 532
LFE NGKA +LH GDFR + +L+ I LDTT
Sbjct: 521 LFEKSIGNGKAARVHRILHCGDFRACSAHINHPLLRPDIKDPHTGQLTQQKIDVCYLDTT 580
Query: 533 YCNPLYDFPKQEAVIQFVIE--------------------------------------AI 554
Y NP Y FP Q+ VI + +
Sbjct: 581 YLNPKYAFPFQQDVIDACAQMCAGINEGFSDTFGAGKGQAMSGSMAPFLQRSKNSGRTSA 640
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+ + K L +IG+Y+IGKER+ L VAR L KIYV+ +K RV CL+ E TT
Sbjct: 641 EGQRDRGKLLVVIGTYSIGKERICLGVARALNSKIYVSPSKKRVCTCLE-DDELSSVLTT 699
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW--- 671
+ E+ +H+ + + S + L N FS I+ PTGW++ + G W
Sbjct: 700 DPLEAQVHMHSLMDMRS-ETLSEYLNSLKSHFSRIIGIRPTGWSY-----RPRGGTWADN 753
Query: 672 -----------------------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHII 705
Q+G+ + VPYSEH SF EL F + II
Sbjct: 754 PTVSSVLHSEAWKPRFSVSDLVPQRGSTKEAACFSVPYSEHSSFRELTMFCCALRISRII 813
Query: 706 PSVN 709
P+VN
Sbjct: 814 PTVN 817
>gi|71002352|ref|XP_755857.1| DNA repair protein Pso2/Snm1 [Aspergillus fumigatus Af293]
gi|66853495|gb|EAL93819.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus
Af293]
gi|159129914|gb|EDP55028.1| DNA repair protein Pso2/Snm1, putative [Aspergillus fumigatus
A1163]
Length = 850
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 160/543 (29%), Positives = 237/543 (43%), Gaps = 104/543 (19%)
Query: 274 IGVTALGPRKKILHTLCEI-KKEYSRAVESNKDAHVSN--DGSSSYHGSERHKEASKVIV 330
+G+ +G +C I + + S E++ HV++ DG + + +E H A + +
Sbjct: 291 VGMNDVGECSGDEGPVCPICQSDLSGLREADVSLHVNDCLDGKPTANSAETHSNAPRQAL 350
Query: 331 DGSSKPAANKLIT-DFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKH 389
S + A + D F S +K S + +G+ + + + + K
Sbjct: 351 SRSDRAAVPRPAQRDPF--SSGGIKSRSAFSMIMAGNAEDAAWASAAAGEVASRGKQAYQ 408
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + +P VDAF+Y + G C+ +FL+H+H DHY GLT S+ HG IYCS TA
Sbjct: 409 RTCPFYKILPNFSICVDAFRYGAVEG-CNAYFLSHYHSDHYMGLTSSWRHGPIYCSRATA 467
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNGKA---- 500
LV ++ + + LP +KT + G+ VT +EANHCPGS I LFE Q G
Sbjct: 468 NLVRQQLKVDPKWVVDLPFEKKTEVPGTNGVHVTMIEANHCPGSAIFLFEKQMGSGPSAR 527
Query: 501 ---VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFPKQEA 545
+LH GDFR S +L + I LDTTY +P Y FP QE
Sbjct: 528 VQRILHCGDFRASPTHVQHVLLRPEVDDPTTGQRRQQKIDVCYLDTTYLSPKYAFPSQED 587
Query: 546 VI---------------QFVIEAI----------------------------QAESFNPK 562
VI Q V +++ QA +
Sbjct: 588 VIEACANLCVSLDQNPEQGVGQSLLQKESSGAGKVMSRFFSAMSGSRGNSDKQAAQAQGR 647
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L +IG+Y+IGKER+ L +AR L+ KIY AK RV +CL+ E T N E+ +H
Sbjct: 648 LLVVIGTYSIGKERICLGIARALKSKIYATPAKKRVCECLE-DPELSSLLTDNPAEAQVH 706
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK------------SPGRR 670
+ ++ + + + L + FS +V F PTGWT+ + SP +
Sbjct: 707 MQTLFEIRA-ETLADYLDSMKPHFSRVVGFRPTGWTYRPPTGRTLDNPPVSTVLHSP--Q 763
Query: 671 W-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSA 716
W Q+G+ Y VPYSEH SF EL F + IIP+VN + S
Sbjct: 764 WKTPFSARDLTPQRGSTRESACYGVPYSEHSSFRELTMFCCALRIGRIIPTVNVGSQKSR 823
Query: 717 NAM 719
M
Sbjct: 824 ERM 826
>gi|119481915|ref|XP_001260986.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL
181]
gi|119409140|gb|EAW19089.1| DNA repair protein Pso2/Snm1, putative [Neosartorya fischeri NRRL
181]
Length = 848
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 197/438 (44%), Gaps = 104/438 (23%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A + S+G++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S
Sbjct: 394 AGEIASRGKQAYQRTCPFYKILPGFSICVDAFRYGAVEG-CNAYFLSHYHSDHYMGLTSS 452
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIII 491
+ HG IYCS TA LV ++ + + LP +KT + G+ VT +EANHCPGS I
Sbjct: 453 WRHGPIYCSRATANLVRQQLKVDSKWVVDLPFEKKTEVPETNGVHVTMIEANHCPGSAIF 512
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTT 532
LFE Q G +LH GDFR S ++L + I LDTT
Sbjct: 513 LFEKQMGSGPSARVQRILHCGDFRASPTHVQHALLRPEIDDPTTGQRRQQKIDVCYLDTT 572
Query: 533 YCNPLYDFPKQEAVIQF---------------VIEAI----------------------- 554
Y +P Y FP QE VI+ V +++
Sbjct: 573 YLSPKYAFPSQEDVIEACANLCVSLDQNPEGGVGQSLLQKESSGAGKVMSRFFAAMGGSR 632
Query: 555 -----QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
QA + L +IG+Y+IGKER+ L +AR L+ KIY AK RV CL+ E
Sbjct: 633 GNSEKQAAQAQGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKKRVCTCLE-DPELS 691
Query: 610 QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR 669
T + E+ +H+ ++ + + + L + FS +V F PTGW + + GR
Sbjct: 692 SLLTDDPTEAQVHMQTLFEIRA-ETLADYLDSMKPHFSRVVGFRPTGWNY----RPPAGR 746
Query: 670 --------------RW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSP 701
+W Q+G+ Y VPYSEH SF EL F +
Sbjct: 747 MLDNPPVSTVLHSPQWKTPFSARDLTPQRGSTRESACYGVPYSEHSSFRELTMFCCALRI 806
Query: 702 EHIIPSVNNDGRDSANAM 719
IIP+VN R S M
Sbjct: 807 GRIIPTVNVGSRKSRERM 824
>gi|195152475|ref|XP_002017162.1| GL21672 [Drosophila persimilis]
gi|194112219|gb|EDW34262.1| GL21672 [Drosophila persimilis]
Length = 637
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 188/340 (55%), Gaps = 21/340 (6%)
Query: 384 SKGRKH---KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S GRK K P + V GT F VD F++ + +H+FLTHFH DHY GLT+ F
Sbjct: 179 SNGRKQRTPKPCPPYKVVEGTHFCVDGFQFGVIPGVTHYFLTHFHADHYIGLTKKFAF-P 237
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGK 499
++ S +TARLV I I + + ++Q + I +T +EANHCPG+++ F+ +G+
Sbjct: 238 LFMSPLTARLVRAFIKIDEMYIHEIDVDQTILVDNIQITGIEANHCPGALMFFFKMSSGE 297
Query: 500 AVLHTGDFRFSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQ---FVIEAIQ 555
+LHTGDFR S EM S+ + I L LDTTY + YDF Q + ++++
Sbjct: 298 CILHTGDFRASFEMESLPIFWNNIDIDLLYLDTTYLSGNYDFCHQTESVDRAVYMVQKFH 357
Query: 556 AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ-WFTT 614
+ L++ GSY IGKE+++L +A ++ A + + CL++ D+Q
Sbjct: 358 ERYPGKRILYVCGSYVIGKEKIWLALAEKFSLTVWTEAHRRIAIDCLEWP--DLQSRLND 415
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQG 674
+ +++++HV+ M + ++ L Q+ ++ +++A P+GW K K S G+R
Sbjct: 416 DPYQANLHVIGMGKV-TYLVLAEYFKQFEDQYDMLLAIRPSGW--EKNSKPSYGKRI--- 469
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
+II E YSEH S+ EL+ FV+F+ P II +V GRD
Sbjct: 470 SIIGIE--YSEHSSYKELERFVRFIKPRRIISTVPV-GRD 506
>gi|302664058|ref|XP_003023665.1| DNA repair protein Pso2/Snm1, putative [Trichophyton verrucosum HKI
0517]
gi|291187671|gb|EFE43047.1| DNA repair protein Pso2/Snm1, putative [Trichophyton verrucosum HKI
0517]
Length = 845
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 135/418 (32%), Positives = 194/418 (46%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
++ S+G++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S+
Sbjct: 394 EEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEG-CNAYFLSHYHSDHYGGLTSSWS 452
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILF 493
HG IYCS +TA LV +I + D + L QKT I G+ VT + ANHCPGS + LF
Sbjct: 453 HGPIYCSTVTANLVKQQIKVKPDMVVELEFEQKTEIPDTDGVSVTMIAANHCPGSSLFLF 512
Query: 494 EPQNGKA-------VLHTGDFRFSEEMASMSVLQTC------------PIHTLILDTTYC 534
E GK +LH GDFR S + +L+ I LDTTY
Sbjct: 513 EKAIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLSEQKIDVCYLDTTYL 572
Query: 535 NPLYDFPKQEAVIQFVI-------------------EAIQAESFNP-------------- 561
NP Y FP Q+ VI +A ++ S P
Sbjct: 573 NPKYAFPFQQDVISACAQLCAGVNEGYFDTLGARKGQAKKSGSMTPLLQSNQGSDRNSVV 632
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K L +IG+Y+IGKER+ L VAR L KIYV+ K R+ +CL+ E T++
Sbjct: 633 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKKRICECLE-DAELASILTSD 691
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-SKGKKKSP------- 667
++ +H+ + + S + L RF+ I+ PTGW++ +G ++
Sbjct: 692 PLDAQVHMHSLMDMRS-ETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDCPPVSAV 750
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL F + IIP+VN
Sbjct: 751 LYSDAWKPRFSINDLVPQRGSTNEAACFSVPYSEHSSFRELTMFCCALRISRIIPTVN 808
>gi|194898775|ref|XP_001978943.1| GG12882 [Drosophila erecta]
gi|190650646|gb|EDV47901.1| GG12882 [Drosophila erecta]
Length = 637
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 168/298 (56%), Gaps = 14/298 (4%)
Query: 415 CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG 474
+H+FLTHFH DHY GLT+ F + +Y S TARLV I + + + ++Q + G
Sbjct: 172 VTHYFLTHFHADHYIGLTKKFCY-PLYVSPTTARLVQTFIKVDTTYIHEIEVDQTLVVNG 230
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT-CPIHTLILDTTY 533
+ VT LEANHCPG+++ F+ +G+ +LHTGDFR S +M S+ + I L LDTTY
Sbjct: 231 VQVTALEANHCPGALMFFFKLSSGECILHTGDFRGSADMESLPIFWNHANIDLLYLDTTY 290
Query: 534 CNPLYDFPKQEAVIQ---FVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIY 590
N YDF Q + +++ A ++ + + L + GSY IGKE+++L +A+ K++
Sbjct: 291 MNKNYDFCHQSESVDRAVYLVRAFIEKNASKRILIVCGSYVIGKEKIWLALAKEFTMKVW 350
Query: 591 VNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
+ + ++CL + D T + E+++HV+ M + S+ L + ++ +++
Sbjct: 351 TESNRSTAVRCLKWPDLD-SVLTEDPREANLHVVTMGKI-SYPSLVDYFTLFEDQYDMLL 408
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
P+GW K K S G+R I + YSEH S+ EL+ FV+F+ P+ +I +V
Sbjct: 409 GIRPSGW--EKNSKPSYGKR-----ISTIGIEYSEHSSYKELERFVRFLKPKRVISTV 459
>gi|308809469|ref|XP_003082044.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
gi|116060511|emb|CAL55847.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
Length = 607
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 183/362 (50%), Gaps = 46/362 (12%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHG------------------------KI 440
VD F + D LTHFH DHY GLT S+ KI
Sbjct: 21 VDGFNFQSPDDVARVLTHFHADHYCGLTSSYGRAETTTRATTTGDGVDASSAIDGRAPKI 80
Query: 441 YCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG---IDVTCLEANHCPGSIIILFEP-Q 496
YCS ITARLV +G+ R++ L + + TTI G I+VT ++ANHCPG+ ++ F +
Sbjct: 81 YCSKITARLVIEVLGVRASRVEALEVGE-TTILGDTEIEVTFIDANHCPGACLVFFRNVR 139
Query: 497 NGKAVLHTGDFRFSEEMASMSVLQTCPIHTLI-------LDTTYCNPLYDFPKQEAVIQF 549
+ +LHTGDFR + + L C + LDTTYC + FP Q+ V++
Sbjct: 140 TNETLLHTGDFRAARRVREDVHLARCLARCVDGGPDEVHLDTTYCEKKWTFPDQDVVLEA 199
Query: 550 VIEAIQAES-FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
+ + + ES P+TLFL GSY++GKER V + R + V + + R L ++ ++D
Sbjct: 200 MRKIAEEESKREPRTLFLCGSYSVGKERAIRAVCQGARTRASVTSRRKRSLVLSEWWRDD 259
Query: 609 IQWFTTNEHES----HIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK 664
+ + E + V + ++ + + + A R+ +VAFSPTGW++ K +
Sbjct: 260 LFVCEDDNPEEAARCRVRVCGLGKGSNHRAMMDIIKNEAPRWGAVVAFSPTGWSYRKSME 319
Query: 665 KSPGRR---W--QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
K R W +G Y VPYSEH S+TEL+EF+KF+ P+ I P+VN + +
Sbjct: 320 KDGEFRVEPWIENEGRTRTYAVPYSEHSSYTELREFIKFLKPKRITPTVNASTENEREKL 379
Query: 720 VS 721
V+
Sbjct: 380 VN 381
>gi|213408198|ref|XP_002174870.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces
japonicus yFS275]
gi|212002917|gb|EEB08577.1| DNA cross-link repair protein pso2/snm1 [Schizosaccharomyces
japonicus yFS275]
Length = 573
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 121/354 (34%), Positives = 181/354 (51%), Gaps = 31/354 (8%)
Query: 385 KGRKHKDIPTWCCVP-GTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYC 442
+ +K + +P + +P PF VDAFKY + D +FL+HFH DHY GL+ S+ HG IYC
Sbjct: 188 RNKKQRTVPRYKLMPFNIPFAVDAFKYGKIDGVEAYFLSHFHSDHYGGLSSSWCHGPIYC 247
Query: 443 SLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE---PQNGK 499
S +T RL+ + + ++ L N+ + G+ V + ANHCPGS I LFE + K
Sbjct: 248 SSVTGRLLENILHVDKKYIKCLSENEPHNVYGVTVFVIPANHCPGSSIFLFETIHSEGTK 307
Query: 500 AVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEA--IQAE 557
VLHTGDFR +L+ IH L LDTTY +P Y P Q V+ E + E
Sbjct: 308 RVLHTGDFRACRAHIEHPLLRDKHIHRLYLDTTYLDPKYMLPAQSEVVNACAEKCRLLQE 367
Query: 558 SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEH 617
+ + L ++ +Y+IGKE++ + +A+ L+ IYV+ K ++L L+ +E Q T + +
Sbjct: 368 ADASRLLVVVSTYSIGKEKVAVAIAKALKTLIYVDDRKRKILDQLE-DEELQQLLTDDPN 426
Query: 618 ESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKS---------- 666
+ +H+ M + L N+ F IV+F TGW + KGKK S
Sbjct: 427 TASVHMATMMQTHP-EALSDYLNKRRPTFDRIVSFRVTGWEYRPKGKKLSVVSNLNSILT 485
Query: 667 --PG---------RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
P R + + + PYSEH SF +L F + + IIP+VN
Sbjct: 486 SPPAPFGPRDLRMARGSSPSCVSFLAPYSEHSSFYDLSVFCSALDVDVIIPTVN 539
>gi|358374994|dbj|GAA91581.1| DNA repair protein Pso2/Snm1 [Aspergillus kawachii IFO 4308]
Length = 836
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 212/471 (45%), Gaps = 117/471 (24%)
Query: 360 TNGQSGSRKSFS------GSDRKKHAAKDQ---SKGRK--HKDIPTWCCVPGTPFRVDAF 408
+G +G+R +FS D +AA S+G++ + P + +PG VDAF
Sbjct: 356 ASGVAGTRSAFSKLMAGNAEDTAWNAAAANEVASRGKQAYQRTCPFYKIIPGFSLCVDAF 415
Query: 409 KY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPL 466
+Y + G C+ +FL+HFH DHY GLT S+ HG IYCS TA LV ++ + DR ++PL
Sbjct: 416 RYGAVEG-CNAYFLSHFHSDHYVGLTGSWRHGPIYCSRPTANLVCQQLKV--DRKWLVPL 472
Query: 467 --NQKTTI---AGIDVTCLEANHCPGSIIILFEPQNGKA-------VLHTGDFRFSEEMA 514
QKT I G VT +EANHCPGS I LFE G VLH GDFR S
Sbjct: 473 EFEQKTEIPGTGGAQVTLIEANHCPGSAIFLFEKLMGSGPSQRTHRVLHCGDFRASPLHV 532
Query: 515 SMSVLQ---TCP---------IHTLILDTTYCNPLYDFPKQEAVIQF------------- 549
++L+ T P I LDTTY +P Y FP QE VI+
Sbjct: 533 QHALLRPEITDPATGKARQQRIDACYLDTTYLSPKYAFPGQEDVIEACADLCVELDQDAN 592
Query: 550 --------------------VIEAIQAESFNP--------KTLFLIGSYTIGKERLFLEV 581
+ A+ +P + L +IG+Y+IGKER+ L +
Sbjct: 593 DTNGRAFGRPVNGKSGMLSKFVTAVTGSRPSPTQGSRPPGRLLVVIGTYSIGKERICLGI 652
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
AR L+ KIY AK RV CL+ E T + E+ +H+ ++ + + + L +
Sbjct: 653 ARALKSKIYATPAKQRVCACLE-DAELSSLLTDDPTEAQVHMQTLFEIRA-ETLADYLDS 710
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRR---------------W-----------QQGT 675
F+ +V F PTGWT+ + P R W Q+G+
Sbjct: 711 MKPHFTRVVGFRPTGWTY-----RPPAGRMLDNPPVSVVLNSAHWKTPFSAKDLVPQRGS 765
Query: 676 IIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+ VPYSEH SF EL F + +IP+VN R S M + +
Sbjct: 766 TRESACFGVPYSEHSSFRELSMFCCALRIGRVIPTVNVGSRKSRERMKAWI 816
>gi|326484025|gb|EGE08035.1| DNA repair protein Pso2/Snm1 [Trichophyton equinum CBS 127.97]
Length = 848
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 195/418 (46%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
++ S+G++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S+
Sbjct: 397 EEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEG-CNAYFLSHYHSDHYGGLTSSWS 455
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILF 493
HG IYCS +TA LV +I + D + L +KT I G D VT + ANHCPGS + LF
Sbjct: 456 HGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 515
Query: 494 EPQNGKA-------VLHTGDFRFSEEMASMSVLQTC------------PIHTLILDTTYC 534
E GK +LH GDFR S + +L+ I LDTTY
Sbjct: 516 EKPIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKITEQKIDVCYLDTTYL 575
Query: 535 NPLYDFPKQEAVI----QFVI---------------EAIQAESFNP-------------- 561
NP Y FP Q+ VI Q + +A ++ S P
Sbjct: 576 NPKYAFPFQQDVINACAQLCVGVNEGYFDTLGAGKGQAKKSGSMTPFLQSNQGSDRNSAV 635
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K L +IG+Y+IGKER+ L VAR L KIYV+ K R+ +CL+ E T++
Sbjct: 636 DQYTRGKLLVVIGTYSIGKERICLGVARALNSKIYVSPNKKRICECLE-DAELSSIVTSD 694
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF---SKGKKKSP----- 667
++ +H+ + + S + L RF+ I+ PTGW++ + SP
Sbjct: 695 PLDAQVHMHSLMDMRS-ETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDSPPVSAV 753
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL F + IIP+VN
Sbjct: 754 LYSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMFCCALRISRIIPTVN 811
>gi|326476055|gb|EGE00065.1| DNA repair protein Pso2/Snm1 [Trichophyton tonsurans CBS 112818]
Length = 848
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 195/418 (46%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
++ S+G++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S+
Sbjct: 397 EEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEG-CNAYFLSHYHSDHYGGLTSSWS 455
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILF 493
HG IYCS +TA LV +I + D + L +KT I G D VT + ANHCPGS + LF
Sbjct: 456 HGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 515
Query: 494 EPQNGKA-------VLHTGDFRFSEEMASMSVLQTC------------PIHTLILDTTYC 534
E GK +LH GDFR S + +L+ I LDTTY
Sbjct: 516 EKPIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKITEQKIDVCYLDTTYL 575
Query: 535 NPLYDFPKQEAVI----QFVI---------------EAIQAESFNP-------------- 561
NP Y FP Q+ VI Q + +A ++ S P
Sbjct: 576 NPKYAFPFQQDVINACAQLCVGVNEGYFDTLGAGKGQAKKSGSMTPFLQSNQGSDRNSAV 635
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K L +IG+Y+IGKER+ L VAR L KIYV+ K R+ +CL+ E T++
Sbjct: 636 DQYTRGKLLVVIGTYSIGKERICLGVARALNSKIYVSPNKKRICECLE-DAELSSIVTSD 694
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF---SKGKKKSP----- 667
++ +H+ + + S + L RF+ I+ PTGW++ + SP
Sbjct: 695 PLDAQVHMHSLMDMRS-ETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDSPPVSAV 753
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL F + IIP+VN
Sbjct: 754 LYSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMFCCALRISRIIPTVN 811
>gi|327305525|ref|XP_003237454.1| DNA repair protein Pso2/Snm1 [Trichophyton rubrum CBS 118892]
gi|326460452|gb|EGD85905.1| DNA repair protein Pso2/Snm1 [Trichophyton rubrum CBS 118892]
Length = 849
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 193/418 (46%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
++ S+G++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S+
Sbjct: 398 EEASRGKQAYERTCPFYKILPGFSITVDAFRYGAIEG-CNAYFLSHYHSDHYGGLTSSWS 456
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILF 493
HG IYCS +TA LV +I + D + L +KT I G D VT + ANHCPGS + LF
Sbjct: 457 HGPIYCSTVTANLVKQQIKVKPDMVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 516
Query: 494 EPQNGKA-------VLHTGDFRFSEEMASMSVLQTC------------PIHTLILDTTYC 534
E GK +LH GDFR S + +L+ I LDTTY
Sbjct: 517 EKPIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLTEQKIDVCYLDTTYL 576
Query: 535 NPLYDFPKQEAVIQFVI-------------------EAIQAESFNP-------------- 561
NP Y FP Q+ VI +A ++ S P
Sbjct: 577 NPKYAFPFQQDVINACAQLCAGVNEGYFDTLGAGKGQAKKSGSMAPFLQSNQGSDRNSAV 636
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K L +IG+Y+IGKER+ L VAR L KIYV+ K R+ +CL+ E T++
Sbjct: 637 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKKRICECLE-DAELSSILTSD 695
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF---SKGKKKSP----- 667
++ +H+ + + S + L RF+ I+ PTGW++ + SP
Sbjct: 696 PLDAQVHMHSLMDMRS-EILSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDSPPVSAV 754
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL F + IIP+VN
Sbjct: 755 LYSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMFCCALRISRIIPTVN 812
>gi|317031918|ref|XP_001393666.2| DNA repair protein Pso2/Snm1 [Aspergillus niger CBS 513.88]
Length = 818
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 150/471 (31%), Positives = 209/471 (44%), Gaps = 117/471 (24%)
Query: 360 TNGQSGSRKSFS------GSDRKKHAAKDQ---SKGRK--HKDIPTWCCVPGTPFRVDAF 408
+G +G+R +FS D AA S+G++ + P + +PG VDAF
Sbjct: 338 ASGVAGTRSAFSKLMAGNAEDTAWSAAAANEVASRGKQAYQRTCPFYKIIPGFSLCVDAF 397
Query: 409 KY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPL 466
+Y + G C+ +FL+HFH DHY GLT S+ HG IYCS TA LV ++ + DR ++PL
Sbjct: 398 RYGAVEG-CNAYFLSHFHSDHYIGLTGSWRHGPIYCSRPTANLVCQQLKV--DRKWLVPL 454
Query: 467 --NQKTTI---AGIDVTCLEANHCPGSIIILFEPQNGKA-------VLHTGDFRFSEEMA 514
+KT I G VT +EANHCPGS I LFE G VLH GDFR S
Sbjct: 455 EFERKTEIPDTGGAQVTLIEANHCPGSAIFLFEKSMGSGPSQRTHRVLHCGDFRASPLHV 514
Query: 515 SMSVL------------QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE---------- 552
++L + I LDTTY +P Y FP QE VIQ E
Sbjct: 515 QHALLRPEIADPATGKARQQRIDACYLDTTYLSPKYAFPGQEDVIQACAELCVELDGDAN 574
Query: 553 -----------------------AIQAESFNP--------KTLFLIGSYTIGKERLFLEV 581
A+ +P + L +IG+Y+IGKER+ L +
Sbjct: 575 DTNGRAFGRPVNGKSGMLSKFVTAVTGSRPSPTQDSRPPGRLLVVIGTYSIGKERICLGI 634
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
AR L+ KIY AK RV CL+ E T + E+ +H+ ++ + + + L +
Sbjct: 635 ARALKSKIYATPAKQRVCACLE-DAELSSLLTDDPTEAQVHMQTLFEIRA-ETLADYLDS 692
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRR---------------W-----------QQGT 675
F+ +V F PTGWT+ + P R W Q+G+
Sbjct: 693 MKPHFTRVVGFRPTGWTY-----RPPAGRMLDNPPVSVVLNSAHWKTPFSAKDLVPQRGS 747
Query: 676 IIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+ VPYSEH SF EL F + +IP+VN R S M + +
Sbjct: 748 TRESACFGVPYSEHSSFRELSMFCCALRIGRVIPTVNVGSRKSRERMKAWI 798
>gi|328850728|gb|EGF99889.1| hypothetical protein MELLADRAFT_40002 [Melampsora larici-populina
98AG31]
Length = 471
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/345 (34%), Positives = 178/345 (51%), Gaps = 31/345 (8%)
Query: 391 DIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
++P + + GT VDAFKY + + + +FL+H H DHY L+ ++ HG +YCS TA L
Sbjct: 91 NVPFYKIMEGTTIAVDAFKYGKIPNITAYFLSHAHADHYTRLSHTWDHGFVYCSQTTANL 150
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE---PQNGKAV--LHT 504
+ +G+ ++ L N+ T + G+ VT L+ANHCPGS + LFE PQ GK LH
Sbjct: 151 ICHNLGVKKQWVKPLKDNEPTMVDGVKVTVLDANHCPGSSLFLFEGVKPQ-GKPFRYLHC 209
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
GDFR S L+ I LDTTY NP Y FP QE VI + +++ + L
Sbjct: 210 GDFRASPAQLRHPALKDKKIDICYLDTTYLNPKYCFPAQEQVINACSDLVKSR--DESIL 267
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
LIG+YTIGKER+ ++A+ + KIY + K + KC++ E + T + ++ +HV
Sbjct: 268 VLIGTYTIGKERIVKQIAKSIGSKIYCDTRKSLIFKCIE-DPELHELMTDDPFKAQVHVT 326
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG---------------- 668
++ + + + L+ ++ G F+ I+ PTGWT+ S
Sbjct: 327 NLFAIKN-EMLEEYLRRFRGHFTHIIGLRPTGWTYKPDALTSSAHPPLDRPITPVEVTQA 385
Query: 669 ----RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+R + VPYSEH SF EL F + IIP+VN
Sbjct: 386 CLYPQRDSTERCQAFGVPYSEHSSFFELTCFCVSMDWVKIIPTVN 430
>gi|164658888|ref|XP_001730569.1| hypothetical protein MGL_2365 [Malassezia globosa CBS 7966]
gi|159104465|gb|EDP43355.1| hypothetical protein MGL_2365 [Malassezia globosa CBS 7966]
Length = 503
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/398 (32%), Positives = 189/398 (47%), Gaps = 70/398 (17%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ IP + + G P VDAF+Y + G C+ +FLTHFH DHY GL+ ++ HG IYC+ T+
Sbjct: 86 RRIPFFKVLDGMPLAVDAFRYGAIEG-CTAYFLTHFHSDHYAGLSSTWKHGPIYCTPATS 144
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFE---------- 494
RLV+ K+ + L+ + L+ +T I G+ VTC++ANHCPGS + LFE
Sbjct: 145 RLVHAKLRVDKMWLRPIALDVRTLIPDSGGVYVTCIDANHCPGSCLFLFEGPLTAHILPS 204
Query: 495 ----PQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
P G + LH GDFR + LQ + + LDTTY +P Y FP Q V
Sbjct: 205 SIRNPHIGTSRVFRYLHCGDFRACPAHKTHPALQLGILDAIYLDTTYLDPRYCFPPQAQV 264
Query: 547 IQFVIEAIQAESFNP-----------------KTLFLIGSYTIGKERLFLEVARVLRKKI 589
+Q I+ + P + L ++GSY+IGKERLFL +A+ L I
Sbjct: 265 VQACIDLVVMPHAQPHDVTLMSAWLKQPQVRSQPLVVVGSYSIGKERLFLALAKALDSCI 324
Query: 590 Y-VNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGR--- 645
Y +A K+ LD + T + + +HV+ + L S L+ + + R
Sbjct: 325 YCADARKYETYALLDDPTLQSR-LTKDPMSARVHVVTLNAL-SLDTLRAYTETFVRRGMS 382
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGR----------------------RWQQGTIIRYEVPY 683
S +A PTGWTFS G+ +P + R + Y VPY
Sbjct: 383 ISHTIAIRPTGWTFS-GRSLAPKKSIDDLVKECVPPTFTYKQLEPQRQSTHAVRIYAVPY 441
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVS 721
SEH SF EL + + IIP+V+ + AM S
Sbjct: 442 SEHSSFYELMALMVSLPHRRIIPTVSAGNQARRQAMRS 479
>gi|302498636|ref|XP_003011315.1| DNA repair protein Pso2/Snm1, putative [Arthroderma benhamiae CBS
112371]
gi|291174865|gb|EFE30675.1| DNA repair protein Pso2/Snm1, putative [Arthroderma benhamiae CBS
112371]
Length = 848
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 194/418 (46%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFH 436
++ S+G++ + P + +PG +DAF+Y + G C+ +FL+H+H DHY GLT S+
Sbjct: 397 EEASRGKQAYERTCPFYKILPGFSITIDAFRYGAIEG-CNAYFLSHYHSDHYGGLTSSWS 455
Query: 437 HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILF 493
HG IYCS +TA LV +I + D + L +KT I G D VT + ANHCPGS + LF
Sbjct: 456 HGPIYCSTVTANLVKQQIKVKPDLVVELEFERKTEIPGTDGVSVTMITANHCPGSSLFLF 515
Query: 494 EPQNGKA-------VLHTGDFRFSEEMASMSVLQTC------------PIHTLILDTTYC 534
E GK +LH GDFR S + +L+ I LDTTY
Sbjct: 516 EKAIGKGKNARIHRILHCGDFRASSAHINHPLLRPNIQDRHTGKLTEQKIDVCYLDTTYL 575
Query: 535 NPLYDFPKQEAVIQFVI-------------------EAIQAESFNP-------------- 561
NP Y FP Q+ VI +A ++ S P
Sbjct: 576 NPKYAFPFQQDVISACAQLCAGVNEGYLDTLGAGKEQAKKSGSMAPFLQSNHGSDRNSAV 635
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K L +IG+Y+IGKER+ L VAR L KIYV+ K R+ +CL+ E T++
Sbjct: 636 DQHNRGKLLVVIGTYSIGKERMCLGVARALNSKIYVSPNKKRICECLE-DAELSSILTSD 694
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-KGKKKSP------- 667
++ +H+ + + S + L RF+ I+ PTGW++ +G ++
Sbjct: 695 PLDAQVHMHSLMDMRS-ETLSEYLKSLGSRFTRIIGIRPTGWSYRPRGGTRTDCPPVSAV 753
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL F + IIP+VN
Sbjct: 754 LYSEAWKPRFSVNDLVPQRGSTNEAACFSVPYSEHSSFRELTMFCCALRISRIIPTVN 811
>gi|121716440|ref|XP_001275809.1| DNA repair protein Pso2/Snm1, putative [Aspergillus clavatus NRRL
1]
gi|119403966|gb|EAW14383.1| DNA repair protein Pso2/Snm1, putative [Aspergillus clavatus NRRL
1]
Length = 847
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 194/438 (44%), Gaps = 107/438 (24%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S+ HG
Sbjct: 399 SRGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEG-CNAYFLSHYHSDHYIGLTASWRHGP 457
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG---IDVTCLEANHCPGSIIILFEPQ 496
IYCS TA LV ++ + L L +KT + G + VT +EANHCPGS I LFE
Sbjct: 458 IYCSRATANLVRQQLKVNGRWLVDLEFEKKTEVPGTNDVQVTMIEANHCPGSAIFLFEKS 517
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPL 537
G +LH GDFR S S+L + I LDTTY +P
Sbjct: 518 IGSGSSARVQRILHCGDFRASPTHVQHSLLRPDIDDPITGERRQQKIDVCYLDTTYMSPK 577
Query: 538 YDFPKQEAVIQFVIEAIQAESFNP------------------------------------ 561
Y FP QE VI+ + NP
Sbjct: 578 YAFPSQEDVIEACASLCVSLDQNPEEGVGQSLWQKGSTGAGNVMNKFFSAVSGSRPAQNP 637
Query: 562 ------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
+ L +IG+Y+IGKER+ L +AR L+ KIY AK RV CL+ D+ T+
Sbjct: 638 SSRPQGRLLVVIGTYSIGKERICLGIARALKSKIYATPAKKRVCACLE--DADLSALLTD 695
Query: 616 E-HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR---- 670
+ E+ +H+ ++ + + + L + FS +V F PTGWT+ + P R
Sbjct: 696 DPTEAQVHMQTLFEIRA-ETLADYLDSMKPHFSRVVGFRPTGWTY-----RPPAGRMLDN 749
Query: 671 -----------W-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHII 705
W Q+G+ Y VPYSEH SF EL F + +I
Sbjct: 750 PPVSTVLHSPHWKTPFSSRDLVPQRGSTRESACYGVPYSEHSSFRELTMFCCALRIGRVI 809
Query: 706 PSVNNDGRDSANAMVSLL 723
P+VN R S M + +
Sbjct: 810 PTVNVGSRKSRERMKAWI 827
>gi|226288344|gb|EEH43856.1| benzoate 4-monooxygenase [Paracoccidioides brasiliensis Pb18]
Length = 1402
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 140/422 (33%), Positives = 190/422 (45%), Gaps = 103/422 (24%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y + G CS +FL+HFH DHY GLT S+ HG+IYCS IT LV
Sbjct: 424 PFYKILPGLSVCVDAFRYGAVEG-CSAYFLSHFHSDHYMGLTSSWCHGRIYCSKITGNLV 482
Query: 451 NMKI--------GIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA-- 500
++ I WD + +P G+ VT L ANHCPGS + LFE + GK
Sbjct: 483 RQQLKVDPEWITDIEWDEVFEIP-----ETGGVQVTMLPANHCPGSSLFLFEKEVGKGPK 537
Query: 501 -----VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPLYDFPKQ 543
+LH GDFR S +L+ + +L LDTTY NP Y FP Q
Sbjct: 538 PKIHRILHCGDFRASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFPNQ 597
Query: 544 EAVIQFV-----------------------IEAIQAE----SFNPKT------------- 563
E VI I A++ S NP++
Sbjct: 598 EDVITACANVCANLDSNENKDVGQATHGPKITAMKTMVDFLSKNPESQTQPGHQRSKSAD 657
Query: 564 --LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
L ++G+Y+IGKERL + +AR L KIY AAK R+ CL+ +E T+N E+ I
Sbjct: 658 RLLVVVGTYSIGKERLCIAIARALNCKIYAPAAKQRICACLE-DEELSGLLTSNPIEAQI 716
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------GRRW 671
H+ + + + + L+ + FS +V F PTGW + + SP W
Sbjct: 717 HMQALMEVRA-ETLRDYLLSFRPHFSRVVGFQPTGWNYRPPAGRTTDSPPVSSVLYSDSW 775
Query: 672 QQGTIIR--------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSAN 717
Q R Y VPYSEH SF EL F + +IP+VN + S +
Sbjct: 776 QSRFNARDLIPQRGSNPESTCYMVPYSEHSSFRELTMFCCALRIGRVIPTVNVGSKKSRD 835
Query: 718 AM 719
M
Sbjct: 836 RM 837
>gi|238488711|ref|XP_002375593.1| DNA repair protein Pso2/Snm1, putative [Aspergillus flavus
NRRL3357]
gi|220697981|gb|EED54321.1| DNA repair protein Pso2/Snm1, putative [Aspergillus flavus
NRRL3357]
Length = 841
Score = 182 bits (461), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 198/432 (45%), Gaps = 94/432 (21%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A++ +SKG++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S
Sbjct: 389 ASEVKSKGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEG-CNAYFLSHYHSDHYIGLTAS 447
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI--AGIDVTCLEANHCPGSIIIL 492
+ HG IYCS T LV ++ + + L + T + G+ VT +EANHCPGS I L
Sbjct: 448 WRHGPIYCSKATGNLVRQQLKVDPRWVVDLEFEKTTEVPNTGVQVTLIEANHCPGSAIFL 507
Query: 493 FEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTY 533
FE G VLH GDFR S ++L+ + ++ LDTTY
Sbjct: 508 FEKAMGSGQSKRIQRVLHCGDFRASPTHVQHALLRPEIVDSVTGQKRQQRIDVCYLDTTY 567
Query: 534 CNPLYDFPKQEAVIQFVIE--------------------------AIQAESFNPKT---- 563
+P Y FP Q VI+ E I ++ FN T
Sbjct: 568 LSPKYSFPSQIDVIEACAELCASLDGGEDEGPAPWQSGKASKEGGGIMSKFFNSVTGSGK 627
Query: 564 ------------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
L +IG+Y+IGKER+ L +AR L+ KIY A K RV CL+ E
Sbjct: 628 SQERSSRPQGRLLVVIGTYSIGKERICLAIARALKSKIYATAGKQRVCACLE-DAELSSL 686
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK------- 664
T + E+ +H+ ++ + + + L + F+ +V F PTGWT+ +
Sbjct: 687 LTDDPVEAQVHMQTLFEIRA-ETLADYLDSMKPHFTRVVGFRPTGWTYRPPTERMLDNPP 745
Query: 665 ----------KSPGRRW----QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
K+P R Q+G+ + + VPYSEH SF EL F + +IP+
Sbjct: 746 VSTVLHSAHWKTPFTRRDLVPQRGSTRESVCFGVPYSEHSSFRELTMFCCALRIGRVIPT 805
Query: 708 VNNDGRDSANAM 719
VN R S M
Sbjct: 806 VNVGSRKSRERM 817
>gi|169849883|ref|XP_001831640.1| DNA cross-link repair protein pso2/snm1 [Coprinopsis cinerea
okayama7#130]
gi|116507278|gb|EAU90173.1| DNA cross-link repair protein pso2/snm1 [Coprinopsis cinerea
okayama7#130]
Length = 738
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 135/443 (30%), Positives = 202/443 (45%), Gaps = 74/443 (16%)
Query: 347 LGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVD 406
L S +N V + ++ + K S ++ K AK S RK P + + G P VD
Sbjct: 274 LASRSNAFSVLMSSFKENEAWKEASAAEAKTRPAKGDSGRRK---APFYKVLQGMPIAVD 330
Query: 407 AFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLP 465
AFKY + + +FLTH H DHY L+ S+ HG IYCS TA L+ + + ++ LP
Sbjct: 331 AFKYGKIPGVTAYFLTHAHSDHYTNLSSSWKHGPIYCSEGTANLIVHMLSVDRKWVKPLP 390
Query: 466 LNQKTTI---AGIDVTCLEANHCPGSIIILFEPQN----GKAV--------------LHT 504
++ T I G+ VT +EANHCPGS + LFE + G LH
Sbjct: 391 MDTPTVIPDTQGVIVTLIEANHCPGSCLFLFEGRQTVNAGDTTFKSAYVGSPRTFRYLHC 450
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQ---------------- 548
GDFR S + ++ I + LDTTY +P Y FP Q V+
Sbjct: 451 GDFRASPQHVLHPAVKGKVIDHVYLDTTYLDPKYTFPPQPLVVSACANLAKKLANGESTR 510
Query: 549 ---------FVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
+ + + TLF+IG+Y+IGKER+ VA+ + KIY K +L
Sbjct: 511 QASGMFSSWLTTSKGKGKEVDKPTLFVIGTYSIGKERIVKAVAKAVGSKIYCEKRKAGLL 570
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
+C E T++ E+ +H++P+ ++S ++K ++ ++S +V F PTGWT+
Sbjct: 571 RC-QADPELHAMLTSDPAEAVVHLLPLGMISS-DKMKEYLERFGDKYSKVVGFRPTGWTY 628
Query: 660 SK--GKKKSPG------RRWQQ--------------GTIIRYEVPYSEHCSFTELKEFVK 697
+ G + P R Q+ TI+ Y VPYSEH SF EL F
Sbjct: 629 VQPSGTDQQPSVNTILTRTVQKPFTYEDLKPNGKSTSTILMYPVPYSEHSSFYELTCFAM 688
Query: 698 FVSPEHIIPSVNNDGRDSANAMV 720
++ +I +VN S M
Sbjct: 689 SLNWTKMIATVNVGSERSRGKMT 711
>gi|317136872|ref|XP_001727344.2| DNA repair protein Pso2/Snm1 [Aspergillus oryzae RIB40]
Length = 826
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 136/432 (31%), Positives = 197/432 (45%), Gaps = 94/432 (21%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A++ +SKG++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S
Sbjct: 374 ASEVKSKGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEG-CNAYFLSHYHSDHYIGLTAS 432
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI--AGIDVTCLEANHCPGSIIIL 492
+ HG IYCS T LV ++ + + L + T + G+ VT +EANHCPGS I L
Sbjct: 433 WRHGPIYCSKATGNLVRQQLKVDPRWVVDLEFEKTTEVPNTGVQVTLIEANHCPGSAIFL 492
Query: 493 FEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTY 533
FE G VLH GDFR S ++L+ + ++ LDTTY
Sbjct: 493 FEKAMGSGQSKRIQRVLHCGDFRASPTHVQHALLRPEIVDSVTGQKRQQRIDVCYLDTTY 552
Query: 534 CNPLYDFPKQEAVIQFVIE--------------------------AIQAESFNPKT---- 563
+P Y FP Q VI+ E I ++ FN T
Sbjct: 553 LSPKYSFPSQIDVIEACAELCASLDRGEDEGPAPWQSGKASKEGGGIMSKFFNSVTGSGK 612
Query: 564 ------------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
L +IG+Y+IGKER+ L +AR L+ KIY A K RV CL+ E
Sbjct: 613 SQERSSRPQGRLLVVIGTYSIGKERICLAIARALKSKIYATAGKQRVCACLE-DAELSSL 671
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK------- 664
T + E+ +H+ ++ + + + L + F+ +V F PTGWT+ +
Sbjct: 672 LTDDPVEAQVHMQTLFEIRA-ETLADYLDSMKPHFTRVVGFRPTGWTYRPPTERMLDNPP 730
Query: 665 ----------KSPGRRW----QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
K+P R Q+G+ + VPYSEH SF EL F + +IP+
Sbjct: 731 VSTVLHSAHWKTPFTRRDLVPQRGSTRESACFGVPYSEHSSFRELTMFCCALRIGRVIPT 790
Query: 708 VNNDGRDSANAM 719
VN R S M
Sbjct: 791 VNVGSRKSRERM 802
>gi|256075515|ref|XP_002574064.1| DNA cross-link repair protein pso2/snm1 [Schistosoma mansoni]
gi|360043082|emb|CCD78494.1| putative dna cross-link repair protein pso2/snm1 [Schistosoma
mansoni]
Length = 431
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/359 (32%), Positives = 179/359 (49%), Gaps = 46/359 (12%)
Query: 393 PTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + +P T VDAF Y C+ +FL+HFH DH++G+ ++F G IYCS +T L+
Sbjct: 59 PFYKWIPDTSITVDAFCYAEIPGCTCYFLSHFHFDHFRGIHKNFK-GDIYCSEVTKNLLR 117
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-PQNGKAVLHTGDFRFS 510
G + VL + + T I ++VT L+ANHCPGS++ LF P + LHTGDFR++
Sbjct: 118 DAYGSGL-VINVLEIEKSTKIGNVEVTALDANHCPGSLMFLFYVPSKQRTYLHTGDFRYT 176
Query: 511 EEMASMSVLQT-----------CP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAES 558
M + + T P IH++ LDTTYC+ YDFP Q VI +E +
Sbjct: 177 PSMLTHPSILTNYISDNSASKKLPRIHSIFLDTTYCSSQYDFPNQVDVIHGALEVTRDYL 236
Query: 559 F-NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL-----DFSKEDIQWF 612
+P L + G Y+IGKER L +A L K+++ + R++K KE +Q+
Sbjct: 237 IKDPTILVVCGMYSIGKERFTLGLASELNLKVWLPNNQNRLIKLAAQGGCSVCKELLQYV 296
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL--------------IVAFSPTGWT 658
+ H++ +HV+PM L + L + R + I+ + PTGW+
Sbjct: 297 VDSSHKAQLHVLPMQQL-NVAGLVQYQKKLGNRLPIDPFHNSPTFPKLRSILGWRPTGWS 355
Query: 659 FSKGKKKSPGRR---------WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ R ++G I Y PYSEH SF ELK+F+ + P + P+V
Sbjct: 356 HRQSNNAQSSIRPPPNGIVLEQKKGDIHIYGAPYSEHSSFLELKQFITRLHPVQVQPTV 414
>gi|295672149|ref|XP_002796621.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226283601|gb|EEH39167.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 932
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 137/422 (32%), Positives = 185/422 (43%), Gaps = 103/422 (24%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y + G CS +FL+HFH DHY GLT S+ HG+IYCS IT LV
Sbjct: 424 PFYKILPGLSVCVDAFRYGAVEG-CSAYFLSHFHSDHYMGLTSSWCHGQIYCSKITGNLV 482
Query: 451 NMKI--------GIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA-- 500
++ I WD + +P G+ VT L ANHCPGS + LFE + GK
Sbjct: 483 RHQLKVDPEWITDIEWDEVFEIP-----ETGGVQVTMLPANHCPGSSLFLFEKEVGKGPK 537
Query: 501 -----VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPLYDFPKQ 543
+LH GDFR S +L+ + +L LDTTY NP Y FP Q
Sbjct: 538 RKIHRILHCGDFRASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFPNQ 597
Query: 544 EAVIQFVIEA-----------IQAESFNPKT----------------------------- 563
E VI + + PKT
Sbjct: 598 EDVITACANVCANLDSNENKDVGQATHGPKTTVMRTMADFLSKNPESQTQPGHLRSKSAD 657
Query: 564 --LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
L ++G+Y+IGKERL + +AR L KIY AAK + CL+ +E T+N E+ I
Sbjct: 658 RLLVVVGTYSIGKERLCIAIARALNCKIYAPAAKQGICACLE-DEELSGLLTSNPIEAQI 716
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------GRRW 671
H+ + + + + L+ + FS +V F PTGW + + SP W
Sbjct: 717 HMQALMEVRA-ETLRDYLLSFRPHFSRVVGFQPTGWNYRPPAGRITDSPPVSSVLYSDSW 775
Query: 672 QQGTIIR--------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSAN 717
Q R Y VPYSEH SF EL F + +IP+VN + S +
Sbjct: 776 QSRFNARDLIPQRGSNPESTCYMVPYSEHSSFRELTMFCCALRIGRVIPTVNVGSKKSRD 835
Query: 718 AM 719
M
Sbjct: 836 RM 837
>gi|358391575|gb|EHK40979.1| hypothetical protein TRIATDRAFT_127244 [Trichoderma atroviride IMI
206040]
Length = 785
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 191/425 (44%), Gaps = 102/425 (24%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+GR + P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG
Sbjct: 307 SRGRPAYERTCPFYKIMPGFAICVDAFRYGAVEG-CQAYFLSHFHSDHYIGLTASWRHGP 365
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + L + + G + VT + ANHCPGS + LFE
Sbjct: 366 IYCSKVTGSLVKQQLRTAAKWVVELEFEKPYDVPGTEGATVTMMPANHCPGSSLFLFEKP 425
Query: 497 NG-------KAVLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPL 537
G K +LH GDFR E +L++ I ++ LDTTY NP
Sbjct: 426 FGNGPNKRTKRILHCGDFRACPEHVRHPLLKSDVIDSISGKSRQQRIDICYLDTTYLNPR 485
Query: 538 YDFPKQEAVIQFVIEAIQAESFNP------------------------------------ 561
Y FP Q VIQ + I + S +P
Sbjct: 486 YSFPPQGDVIQACADLIASMSPDPNCADDVWQRSEKSAGTGTVSKYFQSDKPSDDGAQSK 545
Query: 562 -------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+ L + G+Y+IGKER+ + +A+ L KI+ +AAK ++ K LD E T+
Sbjct: 546 SKSQRKHRLLVICGTYSIGKERICVAIAKALGSKIFASAAKIKICKQLD-DPELTALLTS 604
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK-----SP-- 667
+ E+ +H M M + L+ + Y FS IV F P+GW F G + +P
Sbjct: 605 DPIEAQVH-MQMLMEIRAETLQDYLDSYRPHFSRIVGFRPSGWNFRPGNGRVIGANTPPS 663
Query: 668 ---------GRRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHI 704
G+ W Q+G+ + + VPYSEH SF EL FV + + I
Sbjct: 664 SISTQQLLHGKGWRTRFGAKDLVAQRGSTKEAMCFGVPYSEHSSFRELAMFVMGLRIDKI 723
Query: 705 IPSVN 709
IP+VN
Sbjct: 724 IPTVN 728
>gi|219110329|ref|XP_002176916.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411451|gb|EEC51379.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 684
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 185/363 (50%), Gaps = 28/363 (7%)
Query: 277 TALGPRKKILHTLCEIKKEYSRAVE----SNKDAHVSNDGSSSYHGSERHKEASKVIVDG 332
+AL P K+ I Y + E SN+D +D S G+ E + V+ G
Sbjct: 309 SALSPTTKLAARSVSITNPYKQPSEWHCDSNRDL---DDDRLSRSGTASSSENTLVVGTG 365
Query: 333 SSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDI 392
+ L KV+ + + ++ G R + + Q +
Sbjct: 366 G---IPQRSAFGVLLAGARRAAKVAQISATKKTEKQRARGGWRNGNGRQYQVH-YSARSC 421
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCS-HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + + GT F D F Y R + ++FLTHFH DHY G++++++ G IYCS TA LVN
Sbjct: 422 PLYKKITGTDFVCDGFHYARSSLTQNYFLTHFHSDHYGGISKAWNAGTIYCSFSTANLVN 481
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG----IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
++G+ L LP+ +A + VT L+ANHCPG+++ LFE N + +LH GDF
Sbjct: 482 QQLGVDRKFLHPLPMMTPIVVASRGKPVTVTLLDANHCPGAVMFLFEVGN-RRLLHVGDF 540
Query: 508 RFSEE-MASMSVL-----QTCPIHTLILDTTYCNPLYDFP-KQEAVIQFVIEAIQAESFN 560
R++ E M + L +T + + LDTTYC+P Y P +QEA+ + V AI+ +
Sbjct: 541 RWNREIMQAQGPLRPFFDRTQNLDEIFLDTTYCDPKYSLPDQQEAIKETVKVAIEQVGLS 600
Query: 561 P----KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+TL L G+YTIGKER++L VA L K++V++ ++R+LK L++ E I TT
Sbjct: 601 KRNKDRTLMLFGAYTIGKERIYLSVAEKLGLKVFVDSRRYRILKALEWPSESIAMLTTRP 660
Query: 617 HES 619
E+
Sbjct: 661 EET 663
>gi|367003601|ref|XP_003686534.1| hypothetical protein TPHA_0G02630 [Tetrapisispora phaffii CBS 4417]
gi|357524835|emb|CCE64100.1| hypothetical protein TPHA_0G02630 [Tetrapisispora phaffii CBS 4417]
Length = 680
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 228/486 (46%), Gaps = 94/486 (19%)
Query: 322 HKEASKVIVD--GSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHA 379
H+E+ I+D G + + N TD IT +K N G++K +++K
Sbjct: 187 HEESLATIIDLEGEIQQSNN---TD---KEITTNRKEEILINQDQGNKKEIVIAEQKNVT 240
Query: 380 AKD------QSKGRKHKDIPTW--CCVPGTPFR--VDAFKYLRG-DCSHWFLTHFHMDHY 428
K+ Q K + +P + G ++ VD F Y D + +FL+HFH DHY
Sbjct: 241 VKENKKVIVQRKSKPKAPLPKFKILTFDGGSYKIVVDGFNYASEPDINKYFLSHFHSDHY 300
Query: 429 QGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA-GIDVTCLEANHCPG 487
GL +S+ G IYC+ +TA+L+ +K + D +Q+LPLN+ I + V ++ANHCPG
Sbjct: 301 IGLKKSWDQGIIYCTEVTAKLMELKFNLTGDMVQILPLNEHFWIEPYLSVIAIDANHCPG 360
Query: 488 SIIILFEPQNG---------KAVLHTGDFRFSEEMAS--MSVLQTCPIHTLILDTTYCNP 536
+ I LF+ + + +LHTGDFR ++ M ++ I + LDTTY P
Sbjct: 361 AAIFLFQEWDKAKLDTLPSLRQILHTGDFRSNKSMIENINRIVNGISIDEIYLDTTYLTP 420
Query: 537 LYDFPKQEAVI---------------QFVIEAIQAE--SF-------NPKTLFLIGSYTI 572
Y FP Q++V+ Q + + Q SF LFLIG+Y+I
Sbjct: 421 GYHFPLQKSVLDTTSNFACKLENDGKQLLFKDTQRSIMSFLKNKNKCKFNNLFLIGTYSI 480
Query: 573 GKERLFLEVARVLRKKIYVN--AAKFRVL-KCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
GKE+L + +A+ L KI++N + KF+++ + L+ DI T + ES++H++P+ L
Sbjct: 481 GKEKLAISIAKKLNTKIFINKDSLKFKIISQYLNCFPADI--ITNDVSESYVHLVPISVL 538
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK-------------GKKKSPGRRWQQGTI 676
S + +++ + + IV F PTGWTF K K +
Sbjct: 539 NSKETIENYITTLSESYENIVGFIPTGWTFMNRYGIKLDQYETIAEKVKHCQELLDEKNA 598
Query: 677 IRYE---------------------VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDS 715
++Y+ VPYSEH SF +L EF ++ + I VN D +
Sbjct: 599 LKYDTFNIDSILKQYKKYAKYQIFKVPYSEHSSFKDLIEFGININCDKFIAIVNLDDMNK 658
Query: 716 ANAMVS 721
+ M+S
Sbjct: 659 VDNMIS 664
>gi|254577503|ref|XP_002494738.1| ZYRO0A08514p [Zygosaccharomyces rouxii]
gi|238937627|emb|CAR25805.1| ZYRO0A08514p [Zygosaccharomyces rouxii]
Length = 490
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 131/406 (32%), Positives = 196/406 (48%), Gaps = 75/406 (18%)
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFR--------VDAFKYLR-GDCSHWFLTHFHM 425
++ HA K K + K T +PGT VD F Y R GD H+FL+HFH
Sbjct: 65 KEAHAQKCLDKAPEPKKPKTRPPLPGTKIVKLFSLQIVVDGFAYDRHGDIEHYFLSHFHS 124
Query: 426 DHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANH 484
DHY GL +S+ +G IY S IT LV K I RL+ LP+N+K I + V L+ANH
Sbjct: 125 DHYGGLKKSWTNGIIYASSITINLVRDKFKIDGSRLRPLPMNEKIWITDKVSVVLLDANH 184
Query: 485 CPGSIIILFEPQNG----KAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDF 540
CPG+++ LFE + K VLHTGDFR + ++ T + + LDTTY P + F
Sbjct: 185 CPGAVVFLFEEYDNDAVVKTVLHTGDFRANNKLIEEVKRWTTRLDEVYLDTTYLIPGFHF 244
Query: 541 PKQEAVI---------------QFVIEAIQAESFN--------PKTLFLIGSYTIGKERL 577
P QE+V+ Q + + Q N K LFL+G+YTIGKE+L
Sbjct: 245 PSQESVLEVTSNFAKDLVNRGFQSIFQNDQKSIVNYTHQSPKLYKLLFLVGTYTIGKEKL 304
Query: 578 FLEVARVLRKKIYVNAAKFR---VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
+ +A+VL KI++ A R + + +++ + T + ES +H++P+ L S
Sbjct: 305 AISLAQVLGTKIFIPAGTPRHRMISQYMEYFPSGL--ITHDVKESCVHLVPLRILNSKDS 362
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG-------------------------- 668
++ Y+ + +V F PTGWTF+ K P
Sbjct: 363 IQSYFQNYSSIYEDVVGFIPTGWTFTSKWAKKPEFSTILSRMDYCKEVLHNTQDALDINF 422
Query: 669 -----RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+++Q+ + ++VPYSEH SF +L F + + I+ +VN
Sbjct: 423 VLKQFKKYQRFQV--FKVPYSEHSSFKDLVNFGCSMDYKTILATVN 466
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 168 ESVRCPLCGIDISDLNEELRQAHTNNCLDKC 198
+ VRCPLC DI+ L +++AH CLDK
Sbjct: 46 QEVRCPLCNADITHLEIYMKEAHAQKCLDKA 76
>gi|330923075|ref|XP_003300087.1| hypothetical protein PTT_11241 [Pyrenophora teres f. teres 0-1]
gi|311325940|gb|EFQ91820.1| hypothetical protein PTT_11241 [Pyrenophora teres f. teres 0-1]
Length = 897
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 191/418 (45%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
K + K + P + +PG VDAF+Y ++G + +FL+HFH DHY GLT S+ HG
Sbjct: 447 KSRGKPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQ-NAYFLSHFHSDHYVGLTASWKHG 505
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEP 495
IYCS +T LV ++ + + L +KT + G + VT + ANHCPGS + LFE
Sbjct: 506 PIYCSKVTGNLVRQQLRVDPKWVVDLEFEEKTEVPGTEGVFVTMISANHCPGSSLFLFEK 565
Query: 496 QNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNP 536
+ GK VLH GDFR + +L+ + + LDTTY NP
Sbjct: 566 EIGKGKSPRLQRVLHCGDFRACQAHVEHPLLRPNVLDAVSGKNRQQKLDACYLDTTYLNP 625
Query: 537 LYDFPKQEAVI----------------------------------QFV-IEAIQAESFNP 561
Y FP Q+ VI QFV E+ Q P
Sbjct: 626 KYAFPPQQQVIQACADMCVSLSKVRTDESDGWEKMKRERAGQGMVQFVRKESDQDNPAEP 685
Query: 562 KT------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K+ L ++G+Y+IGKER+ +A+ L KIY K R+ K L+ + D TT+
Sbjct: 686 KSPERGRLLVVVGTYSIGKERICTGIAKALNSKIYAPTNKQRICKALEDPELDA-LLTTD 744
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP----- 667
+ +H+ P++ + + L +YA FS IV F P+GW + K + SP
Sbjct: 745 PRAAQVHMTPLFEIRA-DTLDDYLREYADSFSRIVGFRPSGWNYRPPKGRFTESPQVQTV 803
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q G+ R + VPYSEH SF EL F + + IIP+VN
Sbjct: 804 LHSDNWKSTFSMKDLTPQAGSGSRASCFGVPYSEHSSFRELTMFCCALHIDKIIPTVN 861
>gi|310800348|gb|EFQ35241.1| DNA repair metallo-beta-lactamase [Glomerella graminicola M1.001]
Length = 879
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 184/419 (43%), Gaps = 101/419 (24%)
Query: 389 HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT ++ HG IYCS +T
Sbjct: 409 QRTCPFYKIMPGFYICVDAFRYGAVKG-CNAYFLSHFHSDHYIGLTANWTHGPIYCSKVT 467
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEPQNGKA--- 500
LV M++ + ++ L ++ + G D VT + ANHCPGS + LFE GK
Sbjct: 468 GDLVKMQLRVAAHWVRPLEFDETVDVPGTDGVTVTMIPANHCPGSSLFLFEKTMGKGPSA 527
Query: 501 ----VLHTGDFRFSEEMASMSVLQT------------CPIHTLILDTTYCNPLYDFPKQE 544
+LH GDFR + +L+ I LDTTY NP Y FP Q
Sbjct: 528 KKQRILHCGDFRACPAQVAHPLLKPEVQDSISGKVREQKIDVCYLDTTYLNPRYSFPPQN 587
Query: 545 AVIQ-----------------------------------FVIEAIQAESFNPKT------ 563
VI+ F ++ E+ NPK
Sbjct: 588 DVIKACADMCKSLAPDQPPGYNSWDRISREAGTETVSKFFTKTNVEGEASNPKPKNVPRE 647
Query: 564 --LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
L + G+Y+IGKER+ +A+ L KI+ + +K R+ L E T N +E+ +
Sbjct: 648 RLLVICGTYSIGKERICKAIAQALGSKIFASKSKIRICSKLG-DPELTALMTDNPYEAQV 706
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-SKGKKKSPGRRWQQGTI---- 676
H M M + L+ N Y FS IV F P+GW + +G K+ Q GTI
Sbjct: 707 H-MQMLMEIRAETLQEYLNSYKPHFSRIVGFRPSGWNYRPQGASKAVTANTQPGTIPTTQ 765
Query: 677 --------------------------IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ + VPYSEH SF EL F+ + E ++P+VN
Sbjct: 766 IFQGKAWRSRFGAKDFVAQRGSTKEAMCFGVPYSEHSSFRELAMFLMSLRIERVVPTVN 824
>gi|358378071|gb|EHK15754.1| hypothetical protein TRIVIDRAFT_56212 [Trichoderma virens Gv29-8]
Length = 800
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 205/473 (43%), Gaps = 107/473 (22%)
Query: 351 TNVKKVSTPTNGQSGSRKSFSGSDR-----KKHAAKDQSKGRK--HKDIPTWCCVPGTPF 403
TN +++T T +S K SG+ AA+ S+GR + P + +PG
Sbjct: 284 TNPFEINTETKTKSAFSKLMSGNAEDSAWATAAAAETASRGRPAYERTCPFYKIMPGFAI 343
Query: 404 RVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL 461
VDAF+Y + G C +FL+HFH DHY GLT ++ HG IYCS +T LV ++ +
Sbjct: 344 CVDAFRYGAVEG-CQAYFLSHFHSDHYIGLTANWRHGPIYCSKVTGSLVKQQLRTAAKWV 402
Query: 462 QVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEPQNG-------KAVLHTGDFRFSE 511
L + I G D VT + ANHCPGS + LF+ G K +LH GDFR
Sbjct: 403 VELEFEKPYDIPGTDGASVTMMPANHCPGSSLFLFQKSFGSGPNKRTKRILHCGDFRACP 462
Query: 512 EMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF 559
E +L+ I ++ LDTTY NP Y FP Q VIQ E + S
Sbjct: 463 EHVRHPLLRPDVIDSISGKSRQQRIDICYLDTTYLNPRYSFPPQGDVIQACAELCGSMSA 522
Query: 560 NP-------------------------------------------KTLFLIGSYTIGKER 576
+P + L + G+Y+IGKER
Sbjct: 523 DPNCSDDVWQRSEKSAETGTMSKYFQSDKPSEGDAQSKSTSRPKQRLLVICGTYSIGKER 582
Query: 577 LFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLK 636
+ + +A+ L KI+ + AK ++ K LD E T++ E+ +H M M + L+
Sbjct: 583 ICVAIAKALGSKIFASPAKIKICKQLD-DPELTSLLTSDPVEAQVH-MQMLMEIRAETLQ 640
Query: 637 HMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP----------------GRRW--------- 671
+ Y FS IV F P+GW F G K+ G+ W
Sbjct: 641 EYLDSYRPHFSRIVGFRPSGWNFRPGNGKAVGANTPPSSISTQQLLHGKGWRTRFGVKDL 700
Query: 672 --QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
Q+G+ + + VPYSEH SF EL FV + + +IP+VN S M
Sbjct: 701 VAQRGSTKEAMCFGVPYSEHSSFRELAMFVMSLRIDKVIPTVNVGSEQSRKRM 753
>gi|242812130|ref|XP_002485895.1| DNA repair protein Pso2/Snm1, putative [Talaromyces stipitatus ATCC
10500]
gi|218714234|gb|EED13657.1| DNA repair protein Pso2/Snm1, putative [Talaromyces stipitatus ATCC
10500]
Length = 792
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 138/430 (32%), Positives = 188/430 (43%), Gaps = 102/430 (23%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG
Sbjct: 347 SRGKQAYERTCPFYKILPGFSITVDAFRYGSVEG-CQAYFLSHFHSDHYGGLTASWSHGL 405
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEP- 495
IYCS +T LV ++ + + L +KT + G+ VT L ANHCPGS + LFE
Sbjct: 406 IYCSKVTGNLVRQQLKVDPKYVVDLEFEKKTEVPNTKGVYVTMLYANHCPGSSLFLFEKV 465
Query: 496 -QNGKA--VLHTGDFRFSEEMASMSVLQ------------TCPIHTLILDTTYCNPLYDF 540
G+ VLH GDFR +L+ I LDTTY NP Y F
Sbjct: 466 MDTGRIHRVLHCGDFRACPAHVQHPLLKPDVVDVASGQSHQQRIDVCYLDTTYLNPKYAF 525
Query: 541 PKQEAVI------------------------------------------QFVIEAIQAES 558
P QE VI F + ++S
Sbjct: 526 PNQEDVITACADMCVRLSDEQGDRNEALEFHKRGKMDAMANFLSTTKGKDFTPSSFTSDS 585
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
+ L +IG+Y+IGKER+ L +AR L+ KIY K RV CL+ E T N E
Sbjct: 586 SRGRLLVVIGTYSIGKERICLGIARALKCKIYAPPQKQRVCACLE-DPELSSLLTDNPLE 644
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR-------- 670
+ IH+ ++ + + + L + G FS +V F PTGWT+ + PG R
Sbjct: 645 AQIHMQILFEIRA-ETLSDYLQSFKGHFSRVVGFRPTGWTY-----RPPGGRLLDNPPVA 698
Query: 671 -------W-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL F + IIP+VN
Sbjct: 699 NVLYSSNWKTPFSVSDLVPQRGSTKESSCFGVPYSEHSSFRELTMFCCALRIGRIIPTVN 758
Query: 710 NDGRDSANAM 719
S M
Sbjct: 759 VGSAKSREKM 768
>gi|367016809|ref|XP_003682903.1| hypothetical protein TDEL_0G03250 [Torulaspora delbrueckii]
gi|359750566|emb|CCE93692.1| hypothetical protein TDEL_0G03250 [Torulaspora delbrueckii]
Length = 525
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 192/376 (51%), Gaps = 69/376 (18%)
Query: 400 GTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G VD F + + + +FL+HFH DHY GL +S+ HG IY S IT L+ K +
Sbjct: 129 GYKVVVDGFNFEKDSGINQYFLSHFHSDHYMGLRKSWDHGTIYGSQITVDLMVSKFNMSR 188
Query: 459 DRLQVLPLNQKTTIA-GIDVTCLEANHCPGSIIILFEPQNG------KAVLHTGDFRFSE 511
D ++VLP++++T + I V L+ANHCPG+ + LF+ + K +LHTGDFR +
Sbjct: 189 DLVRVLPMDRETWVTETISVILLDANHCPGATVFLFQEWDSTRQTVIKQILHTGDFRSNP 248
Query: 512 EM-ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI----QFVIEAIQA---ESFNP-- 561
E+ A ++ + T I+ + LDTTY P + FP Q +V+ QF + +Q FN
Sbjct: 249 ELIAKLNSICTSRINQVYLDTTYLIPGFHFPTQNSVLEVTAQFAFDLVQKGIRNYFNDSQ 308
Query: 562 --------------KTLFLIGSYTIGKERLFLEVARVLRKKIYV--NAAKFRVLKCLD-- 603
K LFL+G+YTIGKE+L + +A+ L+ KIY+ +++F+++
Sbjct: 309 QSIFKFVRRKESLFKCLFLVGTYTIGKEKLAIAIAQALKTKIYIPKKSSRFKIISNYTSY 368
Query: 604 FSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK 663
F K+ I T + ES +H++P+ TL S + ++ Y+ + V F PTGWT++
Sbjct: 369 FPKDLI---THDLQESCVHLVPLSTLRSKESIEAYFKDYSSVYDDAVGFIPTGWTYTNKY 425
Query: 664 KKSPG-----------------------------RRWQQ-GTIIRYEVPYSEHCSFTELK 693
+P R+++Q G + VPYSEH SF +L
Sbjct: 426 AHAPDLPTIESRIQYCRDLLKDDSKNTLELKFITRQYKQHGKYQVFRVPYSEHSSFKDLV 485
Query: 694 EFVKFVSPEHIIPSVN 709
F + + I+ +VN
Sbjct: 486 LFGTSIPCKEILATVN 501
>gi|189204073|ref|XP_001938372.1| DNA cross-link repair protein pso2/snm1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985471|gb|EDU50959.1| DNA cross-link repair protein pso2/snm1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 895
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 191/418 (45%), Gaps = 92/418 (22%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
K + K + P + +PG VDAF+Y ++G + +FL+HFH DHY GLT S+ HG
Sbjct: 445 KSRGKPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQ-NAYFLSHFHSDHYVGLTASWKHG 503
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEP 495
IYCS +T LV ++ + + L +KT + G + VT + ANHCPGS + LFE
Sbjct: 504 PIYCSKVTGNLVRQQLRVDPKWVIDLDFEEKTEVPGTEGVFVTMISANHCPGSSLFLFEK 563
Query: 496 QNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNP 536
+ GK VLH GDFR + +L+ + + LDTTY NP
Sbjct: 564 EIGKGKNPRLQRVLHCGDFRACQAHIEHPLLRPNVLDAVSGKNRQQKLDACYLDTTYLNP 623
Query: 537 LYDFPKQEAVIQ----------------------------------FV-IEAIQAESFNP 561
Y FP Q+ VIQ FV E+ Q P
Sbjct: 624 KYAFPPQQQVIQACADMCVSLSKVRTDESDGWEKMKRERAGQGMVKFVRKESDQDNPAEP 683
Query: 562 KT------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
K+ L ++G+Y+IGKER+ +A+ L KIY K R+ K L+ + D TT+
Sbjct: 684 KSPERGRLLVVVGTYSIGKERICTGIAKALNSKIYAPTNKQRICKALEDPELDA-LLTTD 742
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP----- 667
+ +H+ P++ + + L +YA F+ IV F P+GW + K + SP
Sbjct: 743 PRAAQVHMTPLFEIRA-DTLDDYLREYADSFTRIVGFRPSGWNYRPPKGRFTESPQVQTV 801
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q G+ R + VPYSEH SF EL F + + IIP+VN
Sbjct: 802 LHSDNWKSTFSMKDLTPQAGSGSRASCFGVPYSEHSSFRELTMFCCALHIDKIIPTVN 859
>gi|365763857|gb|EHN05383.1| Pso2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 661
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 190/410 (46%), Gaps = 100/410 (24%)
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHH-------GKIYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSXITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF+ + + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAI 554
TGDFR + +M ++ I + LDTTY Y+FP Q E V F + I
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLI 404
Query: 555 Q----------------------AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV- 591
+ + + LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 405 KHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVM 464
Query: 592 -NAAKFRVLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTLAS-------FKRLKH 637
N+ KF ++ + + E D T+N HES +H++P+ L S K LK
Sbjct: 465 PNSVKFSMMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKE 524
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKG----KKKSPGRRWQQG------------------- 674
+ Y +V F PTGW+ + G KK G
Sbjct: 525 LETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDNDDEN 584
Query: 675 -----TIIR----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+I+R + VPYSEH SF +L +F + +IP+VN
Sbjct: 585 GFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 634
>gi|426196552|gb|EKV46480.1| hypothetical protein AGABI2DRAFT_185905 [Agaricus bisporus var.
bisporus H97]
Length = 456
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/401 (31%), Positives = 191/401 (47%), Gaps = 74/401 (18%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + + G P VDAF+Y + G + +FL+H H DHY L+ S+ G IYCS +TA
Sbjct: 31 RKAPFYKVLTGMPIAVDAFRYGAIPG-VTAYFLSHAHSDHYTNLSSSWKSGPIYCSEVTA 89
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQN----GKA 500
L+ + + ++ LP++ T I G+ VT +EANHCPGS + LFE G +
Sbjct: 90 NLIIYMLSVDKKWIRPLPMDTPTIIPDTGGVQVTLIEANHCPGSCLFLFEGHQTVNAGDS 149
Query: 501 V--------------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
LH GDFR S + + I + LDTTY NP Y FP Q V
Sbjct: 150 TFRSTFVGSSRMFRYLHCGDFRASPRHITHPAMTGKKIDCVYLDTTYLNPRYTFPPQPLV 209
Query: 547 IQFVIEAIQ-------------AESFNP-------------KTLFLIGSYTIGKERLFLE 580
I E + +S+ P + L ++G+Y+IGKER+
Sbjct: 210 ISACAELSRRILAGEPTTVNKTMKSWLPSLPSLKPTAGTKGRILVVVGTYSIGKERIVKA 269
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
+A+ L KIY +A K +L+C D +E T+ E+ +H++P+ T+A+ RLK +
Sbjct: 270 IAKALDSKIYCDARKTALLRCED-DRELESMLTSRPLEATVHLVPLGTIAT-DRLKIYMD 327
Query: 641 QYAGRFSLIVAFSPTGWTFSK--GKKKSP------GRRWQQ--------------GTIIR 678
++ G F+ ++ F PTGWT+++ G + P R Q+ +I
Sbjct: 328 RFDGTFTRVIGFRPTGWTYAQPAGTDQLPSIASILARTSQKDFTYVDLHQSPKSTSSIQV 387
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
Y VPYSEH SF EL F + ++ +VN + S M
Sbjct: 388 YGVPYSEHSSFYELTCFAMSFNWLKVVATVNVNSESSRGKM 428
>gi|170069015|ref|XP_001869076.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
gi|167865000|gb|EDS28383.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
Length = 757
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/358 (33%), Positives = 182/358 (50%), Gaps = 23/358 (6%)
Query: 359 PTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD---C 415
P + RKS + K A + + R +P + V GT F VDAF+Y GD
Sbjct: 320 PAKTPAAKRKSTVATTTKSTAKR---RPRGPIIVPKYKIVAGTTFAVDAFRY--GDIAGV 374
Query: 416 SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGI 475
+H+FL+HFH DHY GL +SF I S ITA LV I + +L L++ + G+
Sbjct: 375 THYFLSHFHADHYIGLKKSFDKPLI-MSPITASLVAAFINVDRVHYILLDLHETIVLDGV 433
Query: 476 DVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCN 535
+T L+ANHCPG+++ LF+ G +LHTGDFR S M IHTL LDTTY +
Sbjct: 434 RITALDANHCPGAVLFLFQLPTGTNLLHTGDFRASPAMEEYPEFWNMDIHTLYLDTTYLS 493
Query: 536 PLYDFPKQ-EAVIQFV--IEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVN 592
Y F Q E+V V ++A ++ L + GSY +GKE+++LE+A +++
Sbjct: 494 TKYCFKDQWESVSDAVREVKAFLGQNIGRNVLIVCGSYLVGKEKVWLELAARTGFRVWTE 553
Query: 593 AAKFRVLKCLDFS--KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
+ + + + + + + IHV+ M LA + + +M +++ R ++
Sbjct: 554 PNRRKAVDAVAVECPLQTRGVIVDDPRNAQIHVLSMGKLAYDELVAYM-DEHPER-ECVL 611
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
A P+GW K P R G I + YSEH S+ EL+ FV+F+ P +I +V
Sbjct: 612 ALRPSGWE----KNSRPQYR---GRINIVGIEYSEHSSYDELRRFVRFLRPREVISTV 662
>gi|452001520|gb|EMD93979.1| hypothetical protein COCHEDRAFT_1169437 [Cochliobolus
heterostrophus C5]
Length = 786
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 193/419 (46%), Gaps = 94/419 (22%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
K + K + P + +PG VDAF+Y ++G + +FL+HFH DHY GL+ S+ HG
Sbjct: 336 KSRGKPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQ-NAYFLSHFHSDHYVGLSASWKHG 394
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEP 495
IYCS +T LV ++ + + L KT + G+ VT + ANHCPGS + LFE
Sbjct: 395 PIYCSKVTGNLVRQQLRVDPKWVVDLDFEVKTEVPGTGGVFVTMISANHCPGSSLFLFEK 454
Query: 496 QNGK-------AVLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNP 536
+ GK VLH GDFR + +L+ + + LDTTY NP
Sbjct: 455 EAGKDDNQKLQRVLHCGDFRACQAHVEHPLLRPDVLDAVSGKSRQQKLDACYLDTTYLNP 514
Query: 537 LYDFPKQEAVIQF------------------------------VIEAIQAESFNP----- 561
Y FP Q+ VIQ ++ +Q +S NP
Sbjct: 515 KYAFPPQQQVIQVCADMCVSLSKARADESDGWEKMKRKRAGQGMVNFVQKDS-NPENPSE 573
Query: 562 -------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+ L ++G+Y+IGKER+ +A+ L+ KIY A K R+ K L+ + D TT
Sbjct: 574 PKSPERGRLLVVVGTYSIGKERICTGIAKALKSKIYAPANKQRICKALEDPELDA-LLTT 632
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP---- 667
+ + +H+ P++ + + + L YA FS +V F P+GW + + + SP
Sbjct: 633 DPRAAQVHMTPLFEIRA-ETLDDYLRGYADTFSRVVGFRPSGWNYRPPQGRFTESPQVQT 691
Query: 668 ---GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q G+ R + VPYSEH SF EL F + + IIP+VN
Sbjct: 692 VLHSDNWKSTFAMKDLKPQAGSGSRASCFGVPYSEHSSFRELTMFCCALRIDKIIPTVN 750
>gi|451849701|gb|EMD63004.1| hypothetical protein COCSADRAFT_37879 [Cochliobolus sativus ND90Pr]
Length = 857
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 193/419 (46%), Gaps = 94/419 (22%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
K + K + P + +PG VDAF+Y ++G + +FL+HFH DHY GL+ S+ HG
Sbjct: 407 KSRGKPAYQRTCPFYKIMPGFFIAVDAFRYGAVKGQ-NAYFLSHFHSDHYVGLSASWKHG 465
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEP 495
IYCS +T LV ++ + + L KT + G+ VT + ANHCPGS + LFE
Sbjct: 466 PIYCSKVTGNLVRQQLRVDPKWVVDLDFEVKTEVPGAGGVFVTMISANHCPGSSLFLFEK 525
Query: 496 QNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNP 536
+ GK VLH GDFR + +L+ + + LDTTY NP
Sbjct: 526 EVGKGNNQKLQRVLHCGDFRACQAHVEHPLLRPDVLDAVSGKSRQQKLDACYLDTTYLNP 585
Query: 537 LYDFPKQEAVIQF------------------------------VIEAIQAESFNP----- 561
Y FP Q+ VIQ ++ +Q +S NP
Sbjct: 586 KYAFPPQQQVIQACADMCVSLSKTRADESDGWEKMKRKRAGQGMVNFVQKDS-NPENSSE 644
Query: 562 -------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+ L ++G+Y+IGKER+ +A+ L+ KIY A K R+ K L+ + D TT
Sbjct: 645 PKSPERGRLLVVVGTYSIGKERICTGIAKALKSKIYAPANKQRICKALEDPELDA-LLTT 703
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP---- 667
+ + +H+ P++ + + + L YA FS +V F P+GW + + + SP
Sbjct: 704 DPRAAQVHMTPLFEIRA-ETLDDYLRGYADTFSRVVGFRPSGWNYRPPQGRFTESPQVQT 762
Query: 668 ---GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q G+ R + VPYSEH SF EL F + + IIP+VN
Sbjct: 763 VLHSDNWKSTFAMKDLKPQAGSGSRASCFGVPYSEHSSFRELTMFCCALRIDKIIPTVN 821
>gi|322693286|gb|EFY85152.1| DNA repair protein Pso2/Snm1, putative [Metarhizium acridum CQMa
102]
Length = 844
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 189/439 (43%), Gaps = 102/439 (23%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+GR + P + +PG VDAF+Y ++G C +FL+HFH DHY GLT ++ HG
Sbjct: 366 SRGRPAYERTCPFYKIIPGFNICVDAFRYGAVKG-CEAYFLSHFHSDHYIGLTANWMHGP 424
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEP- 495
IYCS +T LV ++G + L + + G VT + ANHCPGS + LF+
Sbjct: 425 IYCSKVTGSLVKQQLGTAAKWVVELDFEKSYDVPGTVGATVTMIPANHCPGSSLFLFQKP 484
Query: 496 ------QNGKAVLHTGDFRFSE------------EMASMSVLQTCPIHTLILDTTYCNPL 537
GK +LH GDFR + A L I LDTTY NP
Sbjct: 485 ADNNTNSRGKRILHCGDFRACPAHVTHPLIKPDIQDAITGKLSQQTIDICYLDTTYLNPR 544
Query: 538 YDFPKQEAVIQF-------------------------------------------VIEAI 554
Y FP Q VI+ +EA
Sbjct: 545 YSFPPQADVIKACADLCASLSPDPTCKDDFWEKGAKEKGTQAVSKYFQSTTKSNDAVEAK 604
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+ + L + G+Y+IGKER+ + +A+ L+ KI+ K ++ K LD E T+
Sbjct: 605 TSSKLGQRLLVICGTYSIGKERICVAIAKALKSKIFAIPRKRKICKQLD-DPELAGLLTS 663
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK------SP- 667
N E+ +H+ + + + + L+ N Y G FS IV F P+GW + K SP
Sbjct: 664 NPVEAQVHMQSLMEIRA-ETLQEYLNGYKGHFSRIVGFRPSGWNYRPPNSKQMSADASPT 722
Query: 668 ---------GRRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHI 704
G+ W Q+G+ + + VPYSEH SF EL F+ + E +
Sbjct: 723 SIQTQQILHGKGWRSRFGYKDFVAQRGSTKEAMCFGVPYSEHSSFRELAMFIMSLRIEKV 782
Query: 705 IPSVNNDGRDSANAMVSLL 723
IP+VN S M L
Sbjct: 783 IPTVNVGSEQSRKRMKGWL 801
>gi|170072495|ref|XP_001870192.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
gi|167868761|gb|EDS32144.1| DNA cross-link repair 1A protein [Culex quinquefasciatus]
Length = 730
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 120/356 (33%), Positives = 182/356 (51%), Gaps = 23/356 (6%)
Query: 361 NGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD---CSH 417
G RKS + K AAK + +G +P + V GT F VDAF+Y GD +H
Sbjct: 295 QGCDAKRKSIVATS-AKSAAKRRPRG--PIIVPKYKIVAGTTFAVDAFRY--GDIAGVTH 349
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FL+HFH DHY GL +SF I S ITA LV I + +L L++ + G+ +
Sbjct: 350 YFLSHFHADHYIGLKKSFDKPLI-MSPITASLVAAFINVDRVHYILLDLHETIVLDGVRI 408
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
T L+ANHCPG+++ LF+ G +LHTGDFR S M IHTL LDTTY +
Sbjct: 409 TALDANHCPGAVLFLFQLPTGTNLLHTGDFRASPAMEEYPEFWNMDIHTLYLDTTYLSTK 468
Query: 538 YDFPKQ-EAVIQFV--IEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
Y F Q E+V V ++ + L + GSY +GKE+++LE+A +++
Sbjct: 469 YCFKDQWESVSDAVREVKTFLGRNIGRNVLIVCGSYLVGKEKVWLELAARTGFRVWTEPN 528
Query: 595 KFRVLKCLDFS--KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAF 652
+ + + + + + ++ IHV+ M LA + + +M +++ R ++A
Sbjct: 529 RRKAVDAVAVECPLQTRGVIVDDPRDAQIHVLSMGKLAYDELVAYM-DEHPER-ECVLAL 586
Query: 653 SPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
P+GW K P R G I + YSEH S+ EL+ FV+F+ P +I +V
Sbjct: 587 RPSGWE----KNSRPQYR---GRINIVGIEYSEHSSYDELRRFVRFLRPREVISTV 635
>gi|151945839|gb|EDN64071.1| interstrand crosslink repair protein [Saccharomyces cerevisiae
YJM789]
Length = 661
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 190/410 (46%), Gaps = 100/410 (24%)
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHH-------GKIYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF+ + + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAI 554
TGDFR + +M ++ I + LDTTY Y+FP Q E V F + I
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLI 404
Query: 555 Q----------------------AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV- 591
+ + + LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 405 KHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVM 464
Query: 592 -NAAKFRVLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTLAS-------FKRLKH 637
N+ KF ++ + + E D T+N HES +H++P+ L S K LK
Sbjct: 465 PNSVKFSMMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKE 524
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKG----KKKSPGRRWQQG------------------- 674
+ Y +V F PTGW+ + G KK G
Sbjct: 525 LETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDNDDEN 584
Query: 675 -----TIIR----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+I+R + VPYSEH SF +L +F + +IP+VN
Sbjct: 585 GFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 634
>gi|6323786|ref|NP_013857.1| Pso2p [Saccharomyces cerevisiae S288c]
gi|267010|sp|P30620.1|PSO2_YEAST RecName: Full=DNA cross-link repair protein PSO2/SNM1
gi|4502|emb|CAA45405.1| SMN1(PSO2) [Saccharomyces cerevisiae]
gi|606435|emb|CAA87351.1| DNA cross-link repair protein [Saccharomyces cerevisiae]
gi|256270434|gb|EEU05629.1| Pso2p [Saccharomyces cerevisiae JAY291]
gi|259148714|emb|CAY81959.1| Pso2p [Saccharomyces cerevisiae EC1118]
gi|285814139|tpg|DAA10034.1| TPA: Pso2p [Saccharomyces cerevisiae S288c]
Length = 661
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 190/410 (46%), Gaps = 100/410 (24%)
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHH-------GKIYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF+ + + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAI 554
TGDFR + +M ++ I + LDTTY Y+FP Q E V F + I
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLI 404
Query: 555 Q----------------------AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV- 591
+ + + LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 405 KHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVM 464
Query: 592 -NAAKFRVLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTLAS-------FKRLKH 637
N+ KF ++ + + E D T+N HES +H++P+ L S K LK
Sbjct: 465 PNSVKFSMMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKE 524
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKG----KKKSPGRRWQQG------------------- 674
+ Y +V F PTGW+ + G KK G
Sbjct: 525 LETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDNDDEN 584
Query: 675 -----TIIR----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+I+R + VPYSEH SF +L +F + +IP+VN
Sbjct: 585 GFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 634
>gi|413943530|gb|AFW76179.1| putative DNA ligase family protein [Zea mays]
Length = 343
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/298 (34%), Positives = 167/298 (56%), Gaps = 23/298 (7%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FL+HFH DHY GL S+ G ++CS TARLV+ + +P + L + + T+ G V
Sbjct: 47 YFLSHFHSDHYSGLGPSWCRGLVFCSAPTARLVSSVLSVPPQLVVSLDIGVRITVDGWGV 106
Query: 478 TCLEANHCPGSIIILFEPQNGKA--VLHTGDFRFSEEMA-SMSVLQTCPIHTLILDTTYC 534
T ++ANHCPG++ LF KA +HTGDF ++E M ++L+ + LDTTYC
Sbjct: 107 TAVDANHCPGAVQFLFASTGSKAKRYVHTGDFHYTESMTRDPNLLEFVRADAVFLDTTYC 166
Query: 535 NPLYDFPKQEAVIQFVIEAI-----QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKI 589
NP + FP +E + +++ AI ++ + L LI +Y +GKE++ LEVA+ I
Sbjct: 167 NPKFTFPSREDSVDYIVNAIKRVKEESSVSGERVLCLIATYAVGKEKILLEVAQRCGCSI 226
Query: 590 YVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA---------SFKRLKHMSN 640
+V++ K ++L L F ++ FT + + +HV+ W L +F +LK +
Sbjct: 227 HVDSRKMKILTLLGFGGKN-SVFTEDATGTDVHVLG-WNLLGETLPYFQPNFVKLKEIMM 284
Query: 641 QYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
+ ++ V F PTGW + + KK+ R + I + VPYSEH S+ EL+++VKF
Sbjct: 285 ERG--YAKAVGFVPTGWMY-ETKKEGFAVRVKDSLEI-HLVPYSEHSSYNELRDYVKF 338
>gi|396472511|ref|XP_003839135.1| hypothetical protein LEMA_P028080.1 [Leptosphaeria maculans JN3]
gi|312215704|emb|CBX95656.1| hypothetical protein LEMA_P028080.1 [Leptosphaeria maculans JN3]
Length = 965
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/410 (30%), Positives = 191/410 (46%), Gaps = 92/410 (22%)
Query: 389 HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ P + +PG VDAF+Y ++G + +FL+HFH DHY GLT S+ HG IYCS +T
Sbjct: 455 QRTCPFYKIMPGFFIAVDAFRYGAVKGQ-NAYFLSHFHSDHYIGLTSSWAHGPIYCSKVT 513
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNGKA--- 500
LV ++ + + L +KT + G+ VT + ANHCPGS + LFE + G+
Sbjct: 514 GNLVRQQLRVDPKWVVDLDFEKKTEVPGTQGVHVTMISANHCPGSSLFLFEKETGQGKMM 573
Query: 501 ----VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQE 544
VLH GDFR + +L+ + + LDTTY NP Y FP Q+
Sbjct: 574 KLQRVLHCGDFRACQAHIEHPLLRPDVLDAVSGKNRKQKLDACYLDTTYLNPKYAFPPQQ 633
Query: 545 AVIQFV---------IEAIQAESF-----------------------NP---------KT 563
VIQ + A +++ + NP +
Sbjct: 634 QVIQACADMCVSLNKVNADESDGWEQMKRERAGQGMVKFVRKDSNIRNPDEPKSPQRGRL 693
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L ++G+Y+IGKER+ +A+ L+ KIY K R+ K L+ + D TT+ ++ +H+
Sbjct: 694 LVIVGTYSIGKERICTGIAKALKSKIYAPPNKQRICKALEDPELDA-LLTTDPRDAQVHM 752
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SPG-------RRW-- 671
P++ + + + L YA FS V F P+GW + + SP + W
Sbjct: 753 TPLFEIRA-ETLDDYLRDYADTFSRAVGFRPSGWNYRPPNSRFTESPAVQTVLHSQNWKS 811
Query: 672 ---------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q+G+ R + VPYSEH SF EL F + + IIP+VN
Sbjct: 812 SFSMKDLAPQRGSTSRASCFGVPYSEHSSFRELSMFCCALRIDKIIPTVN 861
>gi|349580422|dbj|GAA25582.1| K7_Pso2p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392297300|gb|EIW08400.1| Pso2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 661
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/410 (31%), Positives = 190/410 (46%), Gaps = 100/410 (24%)
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHH-------GKIYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF+ + + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAI 554
TGDFR + +M ++ I + LDTTY Y+FP Q E V F + I
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLI 404
Query: 555 Q----------------------AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV- 591
+ + + LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 405 KHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVM 464
Query: 592 -NAAKFRVLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTLAS-------FKRLKH 637
N+ KF ++ + + E D T+N HES +H++P+ L S K LK
Sbjct: 465 PNSVKFSMMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKE 524
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKG----KKKSPGRRWQQG------------------- 674
+ Y +V F PTGW+ + G KK G
Sbjct: 525 LETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDNDDEN 584
Query: 675 -----TIIR----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+I+R + VPYSEH SF +L +F + +IP+VN
Sbjct: 585 GFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 634
>gi|392565356|gb|EIW58533.1| DRMBL-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 486
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 193/418 (46%), Gaps = 86/418 (20%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
+ P + + G P VDAF+Y +C+ +FLTH H DHY L+ ++ HG IYCS TA
Sbjct: 47 RKAPFYKVLQGMPISVDAFRYGAIPNCTAYFLTHAHSDHYTNLSANWKHGPIYCSPGTAN 106
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQ---NGK--- 499
L+ + + + LP++ T I+ G++VT +EANHCPGS + LFE + NG
Sbjct: 107 LIIHMLKVDPKWVHPLPMDVPTVISNTGGVEVTLIEANHCPGSCLFLFEGKQTVNGGDSA 166
Query: 500 ------------AVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
LH GDFR + ++ + + LDTTY +P Y FP Q VI
Sbjct: 167 YKSPFVGSPRIFRYLHCGDFRACPKHILHPAVKGKHLDHVYLDTTYLDPKYCFPPQPLVI 226
Query: 548 -------QFVIEAIQAESFNP---------------------------------KTLFLI 567
+ +++ E +P K L ++
Sbjct: 227 SACAELAKRLVQGRAVEDVDPGETKPRTVTGWFTRKDKGGDKGKEKDKAASAPTKVLVVV 286
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G+Y+IGKER+ +A+ L KIY +A K +L+C + + D TT+ + + +H++P+
Sbjct: 287 GTYSIGKERIVKAIAKALDTKIYCDARKAAILRCEEDPELDAL-LTTDAYAAGVHLVPLG 345
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK------------KKSPG------- 668
+AS RL+ +++ GR+S + F PTGWTF++ K +S G
Sbjct: 346 VIAS-DRLQDYVDRWKGRYSRAIGFRPTGWTFTQPKGSDTLPPISTVITRSQGLGFTHAN 404
Query: 669 ---RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
R T+ Y VPYSEH SF EL F + +I +VN S M +
Sbjct: 405 LQPMRNSTSTLQVYGVPYSEHSSFFELTCFALSLDWGRMIATVNVGSETSRGKMAKWV 462
>gi|323303509|gb|EGA57302.1| Pso2p [Saccharomyces cerevisiae FostersB]
Length = 661
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 191/410 (46%), Gaps = 100/410 (24%)
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHH-------GKIYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSXITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF + + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFXEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAI 554
TGDFR + +M ++ I + LDTTY Y+FP Q E V F + I
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLI 404
Query: 555 -----------QAESFN-----------PKTLFLIGSYTIGKERLFLEVARVLRKKIYV- 591
Q + F+ + LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 405 KHGKNKTFGDSQRBLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVM 464
Query: 592 -NAAKFRVLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTLAS-------FKRLKH 637
N+ KF ++ + + E D T+N HES +H++P+ L S K LK
Sbjct: 465 PNSVKFSMMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKE 524
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKG----KKKSPGRRWQQG------------------- 674
+ Y +V F PTGW+ + G KK G
Sbjct: 525 LETDYVKDIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDXDDEN 584
Query: 675 -----TIIR----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+I+R + VPYSEH SF +L +F + +IP+VN
Sbjct: 585 GFEISSILRQYKKYNKFQVFNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 634
>gi|225554413|gb|EEH02711.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
G186AR]
Length = 843
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/431 (31%), Positives = 194/431 (45%), Gaps = 94/431 (21%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A ++ S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GLT S
Sbjct: 391 AKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEG-CTAYFLSHFHSDHYIGLTSS 449
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
+ HG+IYCS +T LV ++ + + + +Q I G VT L ANHCPGS I
Sbjct: 450 WCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDQPFEIPRTCGARVTMLPANHCPGSSIF 509
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTT 532
LFE + K+ +LH GDFR S +L+ +L LDTT
Sbjct: 510 LFEKRVNKSREPKVRRILHCGDFRASPTHVQHPILRPNITDSLTGKVRQQIIDVCYLDTT 569
Query: 533 YCNPLYDFPKQEAVIQF----------------------------------------VIE 552
Y NP Y FP Q+ V+ ++
Sbjct: 570 YLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGKSDMDPQAPTLLP 629
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
Q+ES N + L +IG+Y+IGKERL + +A L KIY AAK R+L CL+ S E
Sbjct: 630 YAQSESRN-RLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENS-ELSTLI 687
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK----------- 661
T N E+ +H++ M + + L ++ + FS +V F PTGW++
Sbjct: 688 TNNPVEAQVHMVTMMDVHTGTLLDYL-HSLKPHFSRVVGFRPTGWSYRPPAGRMTDSPPV 746
Query: 662 -------------GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
G + +R Y VPYSEH SF EL F + +IP+V
Sbjct: 747 SSILYSDSWKPRFGTQDLIPQRGSNQISSCYSVPYSEHSSFRELTMFCCALRITKVIPTV 806
Query: 709 NNDGRDSANAM 719
N + S M
Sbjct: 807 NVGSKRSREKM 817
>gi|400602726|gb|EJP70328.1| DNA repair metallo-beta-lactamase [Beauveria bassiana ARSEF 2860]
Length = 842
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/442 (30%), Positives = 196/442 (44%), Gaps = 100/442 (22%)
Query: 379 AAKDQSKGRKH--KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
AA++ S+G+ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT +
Sbjct: 361 AAENASRGKPAYTRTCPFYKIMPGFSICVDAFRYGAVEG-CKAYFLSHFHSDHYIGLTAT 419
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIII 491
+ HG IYCS +T LV ++ + L +++ + G D VT + ANHCPGS +
Sbjct: 420 WTHGPIYCSKVTGSLVRNQLRTAAKWVVELEFDKEYDVPGTDGAKVTMISANHCPGSSLF 479
Query: 492 LFEPQNG-------KAVLHTGDFRFSEEMASMSVLQT------------CPIHTLILDTT 532
+FE G K +LH GDFR + +L+ I LDTT
Sbjct: 480 VFEKVVGERHNKSLKRILHCGDFRACPDHVQHPLLRPDVADSVSGKLRRQKIDICYLDTT 539
Query: 533 YCNPLYDFPKQEAVIQFVIEAIQAESFNP------------------------------- 561
Y NP Y FP Q VIQ + + S +P
Sbjct: 540 YLNPRYSFPPQNDVIQACADLVAKISPDPNCKDDVWDSAKKEAGKTVSKYFQNPTAPVLE 599
Query: 562 ----------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
+ L + G+Y+IGKER+ + +A+ LR KI+ + +K ++ K L E
Sbjct: 600 KPEPKKKLGQRVLIICGTYSIGKERICVAIAKALRTKIFASPSKIKICKQLG-DPELTAL 658
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF------SKGKKK 665
T++ E+ +H M M + L+ N Y FS IV F P+GW F S G
Sbjct: 659 LTSDPIEAQVH-MQMLMEIRAETLQEYLNSYKPHFSRIVGFRPSGWNFRPVNSKSVGANT 717
Query: 666 SP----------GRRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSP 701
+P G+ W Q+G+ + + VPYSEH SF EL F+ +
Sbjct: 718 APSTIPTQQLLHGKGWRTRFGAADFVPQRGSTKEAMCFGVPYSEHSSFRELALFLMSLRI 777
Query: 702 EHIIPSVNNDGRDSANAMVSLL 723
+ +IP+VN S M S +
Sbjct: 778 DKVIPTVNVGSEQSRKRMKSWI 799
>gi|401626290|gb|EJS44243.1| pso2p [Saccharomyces arboricola H-6]
Length = 666
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 204/435 (46%), Gaps = 101/435 (23%)
Query: 376 KKHAAKDQSKGRKHKDIPTWCCVPGT---PFRVDAFKYLRGDC-SHWFLTHFHMDHYQGL 431
KK + + R D+P++ + VD F Y D S +FL+HFH DHY GL
Sbjct: 205 KKDSTSSKRPTRIKPDLPSFKIIKFNNDHEIVVDGFNYKASDTISQFFLSHFHSDHYIGL 264
Query: 432 TRSFHHGK-------IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEAN 483
+S+++ + +YCS ITA LVN+K IP D +Q+LP N++ I I V L+AN
Sbjct: 265 KKSWNNPEENTVKKTLYCSKITAILVNLKFKIPMDEIQILPTNKRFWITDTISVVSLDAN 324
Query: 484 HCPGSIIILF-------EPQNGKAVLHTGDFRFSEEMAS-----MSVLQTCPIHTLILDT 531
HCPG+II+LF E + + +LHTGDFR + M ++ I + LDT
Sbjct: 325 HCPGAIIMLFQEFLSRSEDKPIRQILHTGDFRSNAGMIRTIERWLTETSNDIIDQVYLDT 384
Query: 532 TYCNPLYDFPKQEAVIQ-------------------------FVIEAIQAESFNP-KTLF 565
TY Y+FP Q +V F + +A + P K LF
Sbjct: 385 TYLTMGYNFPSQNSVCNTVADFTSRLLKQGKNKTFGDSQRNLFYFQKKKALTSQPHKFLF 444
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYV--NAAKFRVLKCL--DFSKEDIQW----FTTNEH 617
L+G+YTIGKE+L +++ +L+ K++V N+ KF +++ + + E+ +W T +
Sbjct: 445 LVGTYTIGKEKLAVKICELLKTKLFVMPNSVKFSMIQIVLQNNENENDKWDEDLLTGDMR 504
Query: 618 ESHIHVMPMWTLAS-------FKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK------ 664
ES +H++P+ L S K LK + +V F PTGW+ + G K
Sbjct: 505 ESFVHLVPIRVLKSQESIDIYLKSLKELETDCLTNVEDVVGFIPTGWSHNFGLKYQKSND 564
Query: 665 --------------------KSPGRRWQQGTIIR----------YEVPYSEHCSFTELKE 694
K+ G ++ +I+R + VPYSEH SF +L +
Sbjct: 565 NDNEMNGNIGYCLELMKNDEKNDGSEFEISSILRQYKKYNKFQVFNVPYSEHSSFDDLVK 624
Query: 695 FVKFVSPEHIIPSVN 709
F + ++P+VN
Sbjct: 625 FGCTLKWSEMVPTVN 639
>gi|346324358|gb|EGX93955.1| DNA cross-link repair protein [Cordyceps militaris CM01]
Length = 845
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 203/467 (43%), Gaps = 109/467 (23%)
Query: 363 QSGSRKSFS---------GSDRKKHAAKDQSKGRKH--KDIPTWCCVPGTPFRVDAFKY- 410
QSG++ +FS + AA++ S+GR + P + +PG VDAF+Y
Sbjct: 339 QSGAKSAFSQLMSSNAEDTAWSTAAAAENASRGRPAYMRTCPFYKIMPGFSICVDAFRYG 398
Query: 411 -LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQK 469
+ G C +FL+HFH DHY GLT + HG IYCS +T LV ++ + L +++
Sbjct: 399 AVEG-CKAYFLSHFHSDHYIGLTARWVHGPIYCSKVTGSLVRNQLRTAAKWVVELEFDKE 457
Query: 470 TTIAGID---VTCLEANHCPGSIIILFEPQNG-------KAVLHTGDFRFSEEM------ 513
+ G D VT + ANHCPGS + +FE G K +LH GDFR +
Sbjct: 458 YDVPGTDGAKVTMIPANHCPGSSLFVFEKTVGERHNKSLKRILHCGDFRACPDHVQHPLL 517
Query: 514 ------ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE--------------- 552
A L+ I LDTTY NP Y FP Q VIQ +
Sbjct: 518 RPDTADAISGKLKRQKIDICYLDTTYLNPRYSFPPQNDVIQACADLVAQIYPDPNCKDDV 577
Query: 553 --------------------AIQAESFNPK------TLFLIGSYTIGKERLFLEVARVLR 586
A ++E PK L + G+Y+IGKER+ + +A+ LR
Sbjct: 578 WDSAKKEVGKSVSKYFQNPPATESEKPEPKKKLGQRVLIICGTYSIGKERICVAIAKALR 637
Query: 587 KKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRF 646
KI+ + +K ++ K L E T++ E+ +H M M + L+ N Y F
Sbjct: 638 SKIFASPSKIKICKQLG-DPELTALLTSDPIEAQVH-MQMLMEIRAETLQEYLNSYKPHF 695
Query: 647 SLIVAFSPTGWTFSKGKKKSPG----------------RRW-----------QQGTI--- 676
S IV F P+GW F KS G + W Q+G+
Sbjct: 696 SRIVGFRPSGWNFRPVNSKSVGANAAPSAIATEQLLHSKGWRTRFGVADFVPQRGSTKEA 755
Query: 677 IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+ + VPYSEH SF EL F+ + E +IP+VN S M + +
Sbjct: 756 MCFGVPYSEHSSFRELALFLMSLRIEKVIPTVNVGSEQSRKRMKAWI 802
>gi|325087347|gb|EGC40657.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
H88]
Length = 841
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 198/431 (45%), Gaps = 94/431 (21%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A ++ S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GLT S
Sbjct: 389 AKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEG-CTAYFLSHFHSDHYIGLTSS 447
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
+ HG+IYCS +T LV ++ + + + +Q I G VT L ANHCPGS I
Sbjct: 448 WCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDQPFEIPRTCGARVTMLPANHCPGSSIF 507
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTT 532
LFE + K+ +LH GDFR S +L+ +L LDTT
Sbjct: 508 LFEKRVNKSREPKVRRILHCGDFRASPTHVQHPILRPDITDSLTGKVRQQIIDVCYLDTT 567
Query: 533 YCNPLYDFPKQEAVIQF----------------------------------------VIE 552
Y NP Y FP Q+ V+ ++
Sbjct: 568 YLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGKSDMDPQAPTLLP 627
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
Q+ES N + L +IG+Y+IGKERL + +A L KIY AAK R+L CL+ S E
Sbjct: 628 YAQSESRN-RLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENS-ELSSLV 685
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-- 667
T N E+ +H++ M + + L ++ + FS +V F PTGW++ + SP
Sbjct: 686 TNNPVEAQVHMVTMMDVHTGTLLDYL-HSLKPHFSRVVGFRPTGWSYRPPAGRMTDSPPV 744
Query: 668 -----GRRWQ-----QGTIIR---------YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
W+ Q I + Y VPYSEH SF EL F + +IP+V
Sbjct: 745 SSVLYSDSWKPRFATQDLIPQRGSNQISSCYSVPYSEHSSFRELTMFCCALRITKVIPTV 804
Query: 709 NNDGRDSANAM 719
N + S M
Sbjct: 805 NVGSKRSREKM 815
>gi|212544306|ref|XP_002152307.1| DNA repair protein Pso2/Snm1, putative [Talaromyces marneffei ATCC
18224]
gi|210065276|gb|EEA19370.1| DNA repair protein Pso2/Snm1, putative [Talaromyces marneffei ATCC
18224]
Length = 826
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 184/417 (44%), Gaps = 99/417 (23%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG
Sbjct: 384 SRGKQAYERTCPFYKILPGLFITVDAFRYGAVEG-CQAYFLSHFHSDHYGGLTGSWSHGP 442
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEP- 495
IYCS +T LV ++ + + L +KT + G+ VT L ANHCPGS + LFE
Sbjct: 443 IYCSRVTGNLVRQQLKVDPKYVVDLEFEKKTEVPNTKGVYVTMLPANHCPGSSLFLFEKI 502
Query: 496 -QNGKA--VLHTGDFRFSEEMASMSVLQ------------TCPIHTLILDTTYCNPLYDF 540
NG+ VLH GDFR +L+ + LDTTY NP Y F
Sbjct: 503 MDNGRIHRVLHCGDFRACPAHVQHPLLKPDILDAKSGQSRQQRLDVCYLDTTYLNPKYSF 562
Query: 541 PKQEAVIQF-----------------VIEAIQAESFNPKTLFL----------------- 566
P Q VI V+E + E + FL
Sbjct: 563 PPQADVISACADMCVRLSNEQGDRNEVLELHKHEKADAMAKFLSSKEKEPISTSTPTSRG 622
Query: 567 -----IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
IG+Y+IGKER+ L +AR L+ KIY K R+ CL+ E T N E+ I
Sbjct: 623 RLLVVIGTYSIGKERICLGIARALKCKIYAPPQKQRICACLE-DPELSSLLTDNPLEAQI 681
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR----------- 670
H+ ++ + + + L + G FS +V F PTGWT+ + PG R
Sbjct: 682 HMQIVFEIRA-ETLSDYLQSFKGHFSRVVGFRPTGWTY-----RPPGGRLLDNPPVANVL 735
Query: 671 ----WQQGTIIR--------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W+ + + VPYSEH SF EL F + IIP+VN
Sbjct: 736 HSSNWKTSFSVSDLVPQRGSNKEASCFGVPYSEHSSFRELTMFCCALRIGRIIPTVN 792
>gi|240273448|gb|EER36968.1| DNA cross-link repair protein pso2/snm1 [Ajellomyces capsulatus
H143]
Length = 841
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/431 (32%), Positives = 198/431 (45%), Gaps = 94/431 (21%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A ++ S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GLT S
Sbjct: 389 AKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEG-CTAYFLSHFHSDHYIGLTSS 447
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
+ HG+IYCS +T LV ++ + + + +Q I G VT L ANHCPGS I
Sbjct: 448 WCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDQPFEIPRTCGARVTMLPANHCPGSSIF 507
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTT 532
LFE + K+ +LH GDFR S +L+ +L LDTT
Sbjct: 508 LFEKRVNKSREPKVRRILHCGDFRASPTHVQHPILRPDITDSLTGKVRQQIIDVCYLDTT 567
Query: 533 YCNPLYDFPKQEAVIQF----------------------------------------VIE 552
Y NP Y FP Q+ V+ ++
Sbjct: 568 YLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGKSDMDPQAPTLLP 627
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
Q+ES N + L +IG+Y+IGKERL + +A L KIY AAK R+L CL+ S E
Sbjct: 628 YAQSESRN-RLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENS-ELSSLV 685
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-- 667
T N E+ +H++ M + + L ++ + FS +V F PTGW++ + SP
Sbjct: 686 TNNPVEAQVHMVTMMDVHTGTLLDYL-HSLKPHFSRVVGFRPTGWSYRPPAGRMTDSPPV 744
Query: 668 -----GRRWQ-----QGTIIR---------YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
W+ Q I + Y VPYSEH SF EL F + +IP+V
Sbjct: 745 SSVLYSDSWKPRFATQDLIPQRGSNQISSCYSVPYSEHSSFRELTMFCCALRITKVIPTV 804
Query: 709 NNDGRDSANAM 719
N + S M
Sbjct: 805 NVGSKRSREKM 815
>gi|154271294|ref|XP_001536500.1| hypothetical protein HCAG_08282 [Ajellomyces capsulatus NAm1]
gi|150409170|gb|EDN04620.1| hypothetical protein HCAG_08282 [Ajellomyces capsulatus NAm1]
Length = 835
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 196/439 (44%), Gaps = 105/439 (23%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A ++ S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GLT S
Sbjct: 378 AKEEASRGKQAHERTCPFYKIIPGFSTCVDAFRYGAIEG-CTAYFLSHFHSDHYIGLTPS 436
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
+ HG+IYCS +T LV ++ + + + ++ I +G VT L ANHCPGS I
Sbjct: 437 WCHGQIYCSTVTGNLVRQQLKVDPKWVTDIEFDKPFEIPRTSGARVTMLPANHCPGSSIF 496
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTT 532
LFE + K+ +LH GDFR S +L+ +L LDTT
Sbjct: 497 LFEKRVNKSHEPKVRRILHCGDFRASPTHVQHPILRPDITDSLTGKVRQQIIDVCYLDTT 556
Query: 533 YCNPLYDFPKQ------------------------------------EAVIQFVIEAIQA 556
Y NP Y FP Q ++ + ++A QA
Sbjct: 557 YLNPKYAFPSQDDVVAACAAVCADLNVTEHGHSTDSECRLSHLKTSGQSDMDVCLKAPQA 616
Query: 557 ESFNP--------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
+ P + L +IG+Y+IGKERL + +A L KIY AAK R+L CL+ S E
Sbjct: 617 PTLLPYAQSESRNRLLVVIGTYSIGKERLCMAIAHALNCKIYAPAAKQRILACLENS-EL 675
Query: 609 IQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
T N E+ +H++ M + + L ++ + FS +V F PTGW++ + G
Sbjct: 676 SALITNNPVEAQVHMVTMMDVHTGTLLDYL-HSLKPHFSRVVGFRPTGWSY----RPPAG 730
Query: 669 RRWQQGTIIR----------------------------YEVPYSEHCSFTELKEFVKFVS 700
R T+ Y VPYSEH SF EL F +
Sbjct: 731 RMTDSPTVSSVLYSDSWKPRFATKDLIPQRGSNQISSCYSVPYSEHSSFRELTMFCCALR 790
Query: 701 PEHIIPSVNNDGRDSANAM 719
+IP+VN + S M
Sbjct: 791 ITKVIPTVNVGSKRSREKM 809
>gi|255930809|ref|XP_002556961.1| Pc12g00580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581580|emb|CAP79685.1| Pc12g00580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 845
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 191/425 (44%), Gaps = 94/425 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GL +S+ HG
Sbjct: 402 SRGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEG-CKAYFLSHFHSDHYIGLNKSWCHGP 460
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTT-----IAGIDVTCLEANHCPGSIIILFE 494
IYCS TA LV ++ + D ++ ++ ++T G+ VT L ANHCPGS + LFE
Sbjct: 461 IYCSRPTANLVRQQLRV--DPKWIIDVDFESTTEVPETGGVRVTMLHANHCPGSSLFLFE 518
Query: 495 PQNGKA-------VLHTGDFRFSEEMASMSVLQ---TCP---------IHTLILDTTYCN 535
+G VLH GDFR S +L+ T P I LDTTY +
Sbjct: 519 KSSGAGPNAYNQRVLHCGDFRASPAHVQHRLLRPNVTNPVTEKPRQQHIDKCYLDTTYLS 578
Query: 536 PLYDFPKQEAVI----QFVIEAIQAESFNPKT---------------------------- 563
P Y FP QE VI + Q P T
Sbjct: 579 PKYGFPAQEDVITACADLCVRLNQEAGVGPDTGKNGTSGLMGKFLSAATGSNKPPGKSSH 638
Query: 564 -----LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
L +IG+Y+IGKER+ + +A+ L KI+ K R+ CL+ E T+N HE
Sbjct: 639 VGGRLLVVIGTYSIGKERICMGIAKALGSKIFATPPKQRICACLE-DPELSAMLTSNPHE 697
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------G 668
+ +H+ ++ + + L + FS +V F PTGW + + +P G
Sbjct: 698 AQVHMQTLFEIRA-DTLAEYLDGLKPHFSRVVGFRPTGWNYRPPAGRLIQNPPVSTVLHG 756
Query: 669 RRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
W Q+G+ + VPYSEH SF EL F + IIP+VN +
Sbjct: 757 EHWKSPYTSEDLTPQRGSTRESACFGVPYSEHSSFRELTMFCCALRIGRIIPTVNVASQK 816
Query: 715 SANAM 719
S + M
Sbjct: 817 SRDQM 821
Score = 42.4 bits (98), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 139 ESEEEEEDAVLDVLLKLCDKNDVNCNKID----ESVRCPLCGIDISDLNEELRQAHTNNC 194
E EE+E++ L+V DK +C+ ++ E CP+C + + DLNE H N+C
Sbjct: 264 EGEEQEQEIDLEVDP---DKYLNDCSGVEDVEGEVSTCPICQMKLKDLNETDIAVHVNDC 320
Query: 195 LDKCENQAQDVVFPKHERGPRLEP-EIDLGLGRSPQKAV 232
LD N K P +P +ID GL R+ + A+
Sbjct: 321 LDGKTNPIPATPASKPMVKPTPKPADIDKGLTRAERAAI 359
>gi|407043694|gb|EKE42094.1| DNA repair metallo-beta-lactamase [Entamoeba nuttalli P19]
Length = 396
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 173/334 (51%), Gaps = 24/334 (7%)
Query: 396 CCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
C + F VDAFKY ++ L+HFH DHYQGL+ + G I + IT LV K
Sbjct: 23 CKLLFNEFIVDAFKYQIKGYKYFLLSHFHSDHYQGLSSKWKCGIIIGTEITLNLVKYKFK 82
Query: 456 IPWDRLQVLPLNQKTTIAGID-----VTCLEANHCPGS-IIILFEPQNGKAVLHTGDFRF 509
I + L V+PLN T G + VT +EA H PGS ++ +G LH GDFRF
Sbjct: 83 IKNEYLYVIPLNTPTYFEGSNNDGYIVTAIEAGHAPGSCCFVIKRISDGIIYLHVGDFRF 142
Query: 510 SEEMAS----MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
+ + + T I+TL LDTTYC+P Y F +++ + ++ ++ KTLF
Sbjct: 143 DSTLQNDKNWKEYVFTQHINTLFLDTTYCDPQYKFKERQIICNEAVKIVKQSM--GKTLF 200
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
++ +YTIGKE E+AR KI+V+ K+ ++K K D+ +T ES + +
Sbjct: 201 IVQTYTIGKEMFVEEIARQTGIKIHVDENKYSIVK---LCKRDLSLYTLE--ESSLEIRT 255
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ +S L +Q ++ I+ F PTGW KK + ++ + Y++PYSE
Sbjct: 256 SISNSSITSLTVELSQLPNKYDRIIIFQPTGW----AKKTTCKGSFE---VKEYKIPYSE 308
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
H SF EL + K + +H+IPSV +G+ S +
Sbjct: 309 HSSFNELIDCYKMIHADHVIPSVIGEGQTSQKII 342
>gi|425767838|gb|EKV06391.1| DNA repair protein Pso2/Snm1, putative [Penicillium digitatum
PHI26]
gi|425783769|gb|EKV21590.1| DNA repair protein Pso2/Snm1, putative [Penicillium digitatum Pd1]
Length = 844
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 133/425 (31%), Positives = 193/425 (45%), Gaps = 94/425 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GL++S+ HG
Sbjct: 401 SRGKQAYQRTCPFYKILPGFSICVDAFRYGAVEG-CNAYFLSHFHSDHYIGLSKSWCHGP 459
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTT-----IAGIDVTCLEANHCPGSIIILFE 494
IYCS TA LV ++ + D V+ L ++T G+ VT + ANHCPGS + LFE
Sbjct: 460 IYCSRPTANLVRQQLRV--DPKWVVDLEFESTTEVPETGGVRVTMIHANHCPGSSLFLFE 517
Query: 495 PQNGKA-------VLHTGDFRFSEEMASMSVLQ---TCP---------IHTLILDTTYCN 535
G + VLH GDFR S +L+ P I LDTTY +
Sbjct: 518 KSYGNSPNASKQRVLHCGDFRASPAQVQHPLLRPDVIIPVTGKPRQQHIDKCYLDTTYLS 577
Query: 536 PLYDFPKQEAVI------------------------------QFVIEAI-------QAES 558
P Y FP QE VI +F+ A +
Sbjct: 578 PKYGFPAQEDVITACSELCVRLNHETGVGLDAGKNDTGGLMGKFLSVATGINKALDKGSQ 637
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
+ L +IG+Y+IGKER+ + +AR L KI+ K R+ CL+ E T N HE
Sbjct: 638 AGGRLLVVIGTYSIGKERICMGIARALGSKIFATPPKQRICACLE-DPELTAMLTNNPHE 696
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------G 668
+ +H+ ++ + + L + FS +V F PTGWT+ + +P G
Sbjct: 697 AQVHMQTLFEIRA-DTLADYLDGLKPHFSRVVGFRPTGWTYRPPAGRLVQNPPVSTVLHG 755
Query: 669 RRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
W Q+G+ + VPYSEH SF EL F + +IP+VN +
Sbjct: 756 ENWKSPYTSQDLTPQRGSTRESACFGVPYSEHSSFRELTMFCCALRIGRVIPTVNVASQK 815
Query: 715 SANAM 719
S + M
Sbjct: 816 SRDQM 820
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 139 ESEEEEEDAVLDVLLKLCDKNDVNCNKID----ESVRCPLCGIDISDLNEELRQAHTNNC 194
E EE+E+ L+V DK+ + + ++ E CP+C + + DL+E H N C
Sbjct: 263 EGEEQEQQVDLEVDP---DKDSNDSSGVEGLEGEVSTCPICQVMLKDLDETAISVHVNEC 319
Query: 195 LDKCENQAQDVVFPKHERGPRLEP-EIDLGLGRSPQKAV 232
LD N + PK P +P ID GL R+ + A+
Sbjct: 320 LDGKSNPSPATPAPKAMLKPTPKPANIDKGLTRAERAAI 358
>gi|345569041|gb|EGX51910.1| hypothetical protein AOL_s00043g644 [Arthrobotrys oligospora ATCC
24927]
Length = 856
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 201/438 (45%), Gaps = 95/438 (21%)
Query: 377 KHAAKDQSKGRKHKDI----PTWCCVPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGL 431
K AA ++++ R + P + +P VDAF+Y + ++ +FL+HFH DHY GL
Sbjct: 397 KEAADEETRSRGKRSFQRTCPFYKILPNLNVAVDAFRYGAVEGTNAYFLSHFHSDHYIGL 456
Query: 432 TRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGS 488
+ S++HG IYCS +TA L ++ + ++ L ++T + G VT ++ANHCPGS
Sbjct: 457 SSSWNHGPIYCSRVTANLCRRQLRVDPQYIKELEYEKRTEVPGTGGATVTMIDANHCPGS 516
Query: 489 IIILFE-----PQNGK--AVLHTGDFRFSEEMAS---MSVLQTCPIHTLILDTTYCNPLY 538
+ LFE P+ + +LH GDFR S + +SV + I LDTTY NP Y
Sbjct: 517 SLFLFEKTISSPRGARRQRILHCGDFRASAKHLRHPLLSVARKNRIDICYLDTTYLNPKY 576
Query: 539 DFPKQEAVIQ---------------------------------FVI------EAIQAESF 559
FP Q+ VI+ F I EA ++S
Sbjct: 577 AFPPQKQVIEACMELCVSLDKEVEEGKELGFGECRKEGGGIEKFTIPKAPTSEASGSKSD 636
Query: 560 NP------------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
+P K L ++G+Y+IGKER+ + +AR L KIY A K R+ L+ E
Sbjct: 637 SPTNVVNSSVKTKGKLLVVVGTYSIGKERICMGIARALNCKIYAPANKQRICAALE-DDE 695
Query: 608 DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK-- 665
T++ H + +H+ P+ + + LK + RF+ IV F P+GW + +
Sbjct: 696 LNSRLTSDPHAAQVHMTPLMEIRP-ETLKEYLLSFKQRFTKIVGFRPSGWNYRPPTGRLV 754
Query: 666 -SP-------GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEH 703
SP + W Q+G+ + VPYSEH SF EL F +
Sbjct: 755 DSPQVQTVLNSQAWRSNYGVTHMVPQRGSTAEVKCFGVPYSEHSSFRELTAFCCALDIVR 814
Query: 704 IIPSVNNDGRDSANAMVS 721
IIP+VN S M S
Sbjct: 815 IIPTVNVGSAKSREKMKS 832
>gi|393221757|gb|EJD07241.1| DRMBL-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 485
Score = 172 bits (435), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/403 (31%), Positives = 176/403 (43%), Gaps = 84/403 (20%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
+ + P + + G P VDAF+Y + G +FLTH H DHY L+ ++ G IYCS
Sbjct: 45 ERRKAPFYKILTGMPIAVDAFRYGTIPG-VEAYFLTHAHSDHYTNLSSNWKSGPIYCSET 103
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFE-------- 494
TA L+ + + L LP+N + G+ VT L+ANHCPGS + LFE
Sbjct: 104 TANLIAHMLSVDRKWLHPLPMNTPVEVPNTGGVKVTLLDANHCPGSCLFLFEGSQTTNAG 163
Query: 495 ------PQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQE 544
P G + LH GDFR S + ++ + T+ LDTTY NP Y FP Q
Sbjct: 164 DSTYKSPFVGTSRTFRYLHCGDFRASPQHVLHPSVKGKRLDTVYLDTTYLNPRYCFPPQP 223
Query: 545 AVIQFVIE------------------------------------AIQAESFNPKTLFLIG 568
V+ E Q + + L ++G
Sbjct: 224 LVVSACAELARRIVNGEPLDSDNGKGSSNGKASIQEWMKTGEGKGKQRAQKDGEVLIVVG 283
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
+Y+IGKER+ +A+ L K+Y ++ K +L C D E T E+ +HV+P+
Sbjct: 284 TYSIGKERVVKAIAKALNTKVYCDSRKVAILHCQD-DPELHALLTDKPLEAGVHVVPLGQ 342
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP--------------------- 667
+AS R K +++ GR+S VAF PTGWT+S P
Sbjct: 343 VAS-DRFKEYMDRWKGRWSRAVAFRPTGWTYSPPVGSDPMPPISRVVAAAQARDFTYAHL 401
Query: 668 -GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
R ++Y VPYSEH SF EL F V II +VN
Sbjct: 402 RPARNSTAQFMQYGVPYSEHSSFAELACFALSVDCARIIATVN 444
>gi|258575265|ref|XP_002541814.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902080|gb|EEP76481.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 828
Score = 171 bits (434), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 189/418 (45%), Gaps = 85/418 (20%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G CS +FL+HFH DHY GL ++ HG
Sbjct: 388 SRGKQAFERTCPFYKILPGFSICVDAFRYGAVEG-CSAYFLSHFHSDHYVGLNSNWSHGP 446
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + L + T + G+ VT + ANHCPGS + LFE +
Sbjct: 447 IYCSKVTGNLVRQQLNVNPKFVVDLDFEKPTDVPDTDGVKVTMIHANHCPGSALFLFEKK 506
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCP------------IHTLILDTTYCNPL 537
G+ +LH GDFR S +L+ P I LDTTY NP
Sbjct: 507 FGQGKGQRVQRILHCGDFRASPAHIQHPLLRPDPIDQATGQPKQQRIDVCYLDTTYLNPK 566
Query: 538 YDFPKQEAVIQFV--------------------------------IEAIQAESFNPKTLF 565
Y FP Q+ VI + E+ + L
Sbjct: 567 YAFPSQQDVIDACAQMCVNLNENKSGCRDLWQRGKSMPKDSKEPHVNGKPTETSKSRLLV 626
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+IG+Y+IGKER+ L +A+ L KI+ AAK R+ CL+ E T++ E+ +H+
Sbjct: 627 VIGTYSIGKERICLGIAKALGCKIFATAAKQRICACLE-DPELSSLLTSDPLEAQVHMHS 685
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SPG-------RRWQQGT 675
+ + S +++++ + F+ +V F PTGW + + +P W+
Sbjct: 686 LMEIRSDTLSEYLAS-FKPHFTHVVGFRPTGWNYRPPTGRMVDNPAVSTVLQSESWKTRF 744
Query: 676 IIR--------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
++ + VPYSEH SF EL F + +IP+VN R + M
Sbjct: 745 TVKDLVPQRGSNKDSSCFGVPYSEHSSFRELTMFCCALRIAKVIPTVNVASRKTREKM 802
>gi|409081319|gb|EKM81678.1| hypothetical protein AGABI1DRAFT_70037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 456
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/401 (31%), Positives = 188/401 (46%), Gaps = 74/401 (18%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + + G P VDAF+Y + G + +FL+H H DHY L+ S+ G IYCS +TA
Sbjct: 31 RKAPFYKVLTGMPIAVDAFRYGAIPG-VTAYFLSHAHSDHYTNLSSSWKSGPIYCSEVTA 89
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQN----GKA 500
L+ + + ++ LP++ T I G+ VT +EANHCPGS + LFE G +
Sbjct: 90 NLIIYMLSVDKKWIRPLPMDTPTIIPDTGGVQVTLIEANHCPGSCLFLFEGHQTVNAGDS 149
Query: 501 V--------------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
LH GDFR S + I + LDTTY NP Y FP Q V
Sbjct: 150 TFRSTFVGSSRMFRYLHCGDFRASPRHIMHPAMAGKKIDCVYLDTTYLNPRYTFPPQPLV 209
Query: 547 IQFVIEAIQ-------------AESFNP-------------KTLFLIGSYTIGKERLFLE 580
I E + +S+ P + L ++G+Y+IGKER+
Sbjct: 210 ISACAELSRRLFAGEPTTVNKTMKSWLPSLPSLKPTAGTKGRILVVVGTYSIGKERIVKA 269
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
+A L KIY +A K +L+C D +E T+ E+ +H++P+ T+ + RLK +
Sbjct: 270 IANALDSKIYCDARKTALLRCED-DRELESMLTSRPLEATVHLVPLGTITT-DRLKIYMD 327
Query: 641 QYAGRFSLIVAFSPTGWTFSK--GKKKSP------GRRWQQ--------------GTIIR 678
++ G F+ ++ F PTGWT+++ G + P R Q+ +I
Sbjct: 328 RFDGTFTRVIGFRPTGWTYTQPAGTDQLPSIASILARTSQKDFTYVDLHQSPKSTSSIQV 387
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
Y VPYSEH SF EL F + ++ +VN + S M
Sbjct: 388 YGVPYSEHSSFYELTCFAMSFNWLKVVATVNVNSESSRGKM 428
>gi|50550517|ref|XP_502731.1| YALI0D12166p [Yarrowia lipolytica]
gi|49648599|emb|CAG80919.1| YALI0D12166p [Yarrowia lipolytica CLIB122]
Length = 603
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 207/433 (47%), Gaps = 83/433 (19%)
Query: 355 KVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPG--TPFRVDAFKY-- 410
K PT+ QS + G + + R K P++ + T VD+F +
Sbjct: 165 KAKEPTSTQSMMVCNSQGEMTSAVVEPVKKQKRAKKPAPSFKIIKMGETNVAVDSFMHGP 224
Query: 411 LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT 470
L G + +FL+HFH DHY GL +S++HG I+C+ ITA L MK+G+ + L +P++
Sbjct: 225 LEG-INLYFLSHFHADHYGGLRKSWNHGPIFCTPITAALCKMKLGVQDEWLVPIPIHIPF 283
Query: 471 TIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV-------LQTC 522
+ ++V +ANHCPG+ ++LF AV H GDFR A+M++ L+
Sbjct: 284 CVGNDVEVIFFDANHCPGAAVMLFTSPTKTAV-HCGDFR-----ANMNLVREIKLKLKQR 337
Query: 523 PIHTLILDTTYCNPLYDFPKQEAVIQFV--------------IEAIQAES---------- 558
+ + LDTTY P + FP Q V+Q +E Q +S
Sbjct: 338 ELDEVYLDTTYLGPSHAFPSQNRVVQVCADFCVRLNNLKMEQLEKAQRQSTIGRFFTSSP 397
Query: 559 ----FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI-QWFT 613
+TLF++G+YTIGKERL +E+A L K++ + K R+LK F+ I + T
Sbjct: 398 NSPVHQLRTLFVVGTYTIGKERLAIEIALRLGSKLFADTTKRRILKT--FNDPVISELLT 455
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ 673
++ E+ +H++P+ + +H+ + + FS IVAF+PTGW++ KS + +Q
Sbjct: 456 SDPLEAQVHLVPLGQTRKDQLFEHLKS-FKPHFSKIVAFAPTGWSYR--PPKSAIQANEQ 512
Query: 674 GTIIR------------------------------YEVPYSEHCSFTELKEFVKFVSPEH 703
T +R Y VPYSEH SF EL+ F ++
Sbjct: 513 ATDLRPSYYDFGDLEYNVENLDRNLERSAIEPVQKYNVPYSEHSSFVELRAFCLNMAATT 572
Query: 704 IIPSVNNDGRDSA 716
IIP+VN +S
Sbjct: 573 IIPTVNMSADESV 585
>gi|452987795|gb|EME87550.1| hypothetical protein MYCFIDRAFT_27226 [Pseudocercospora fijiensis
CIRAD86]
Length = 677
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 137/457 (29%), Positives = 200/457 (43%), Gaps = 112/457 (24%)
Query: 360 TNGQSGSRKSFSG-------SDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-- 410
+NG+S K SG ++ + K + P + +PG VDAF+Y
Sbjct: 191 SNGKSAFNKLMSGHTEEAAWAEAAASENAARGKPSYQRTCPFYKILPGLFICVDAFRYGA 250
Query: 411 LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT 470
++G C +FL+HFH DHY GLT S+ HG IYCS +TA LV ++ + D V+PL +
Sbjct: 251 VKG-CQAYFLSHFHSDHYVGLTSSWRHGPIYCSKVTANLVKQQLRV--DPQYVIPLEFEK 307
Query: 471 TI-----AGIDVTCLEANHCPGSIIILFEPQNGK---------AVLHTGDFRFSEEMASM 516
TI G+ VT + ANHCPGS + LFE GK +LH GDFR +
Sbjct: 308 TIEVPGTKGVRVTMISANHCPGSSLYLFEKTMGKHYNGNPRLQRILHCGDFRACKMHVQH 367
Query: 517 SVL------------QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEA----------- 553
+L + I LDTTY NP Y FP QEAVI+ +
Sbjct: 368 PLLMPEVQDKVSGKSREQKIDVCYLDTTYLNPKYAFPSQEAVIKACADMCVCLSKDSPGE 427
Query: 554 ---------------------------IQAESFNPKT----------LFLIGSYTIGKER 576
I+ E + T L ++G+Y+IGKER
Sbjct: 428 DDGWETMKRQRAGEGMTKFVRKDSNPEIKEEELDEDTKDDMRTRGRLLVVVGTYSIGKER 487
Query: 577 LFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLK 636
+ L +AR L+ KIY +K R++ L+ D + T + + +H+ P++ + + + L
Sbjct: 488 ICLGIARALKSKIYAPTSKRRIVAALEDPALD-ELMTDDPRAAQVHMTPLFEIRA-ETLD 545
Query: 637 HMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------GRRW-----------QQGT 675
+ F+ V F P+GW + + SP W Q+G+
Sbjct: 546 DYLKDFFPHFTRAVGFRPSGWNYRPPNSRFTESPPVQTVLKSDNWKSTYSMRDLVPQRGS 605
Query: 676 IIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
R + VPYSEH SF EL F + + IIP+VN
Sbjct: 606 SSRASCFGVPYSEHSSFRELTMFCCALRIDKIIPTVN 642
>gi|429849697|gb|ELA25052.1| DNA repair protein pso2 [Colletotrichum gloeosporioides Nara gc5]
Length = 828
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/431 (30%), Positives = 186/431 (43%), Gaps = 103/431 (23%)
Query: 377 KHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
+H+A+ K + P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT +
Sbjct: 348 EHSAR--GKPAYQRTCPFYKIMPGFYICVDAFRYGAVKG-CNAYFLSHFHSDHYIGLTAN 404
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIII 491
+ HG IYCS +T LV M++ + ++ L N+ + G+ VT + ANHCPGS +
Sbjct: 405 WTHGPIYCSKVTGDLVKMQLRVAAHWVRPLEFNETVDVPGTEGVTVTMISANHCPGSSLF 464
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQ------------TCPIHTLILDTT 532
LFE GK +LH GDFR + +L+ I LDTT
Sbjct: 465 LFEKTMGKGPSARKQRILHCGDFRACPAQVAHPLLKPEVQDSISGKTRQQKIDVCYLDTT 524
Query: 533 YCNPLYDFPKQEAVIQ-----------------------------------FVIEAIQAE 557
Y NP Y FP Q VI+ F I E
Sbjct: 525 YLNPRYSFPPQNDVIRACAELCTSLAPEQNSEDNAWDRVNREAGTDTVSKFFSKTKIDGE 584
Query: 558 SFNPKT--------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
+ K L + G+Y+IGKER+ +A+ L KI+ + +K R+ L E
Sbjct: 585 TTKAKPKNAPKERLLVICGTYSIGKERICKAIAQALGSKIFASKSKIRICSKLG-DPELT 643
Query: 610 QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-SKGKKKSPG 668
T N E+ +H M M + L+ N Y FS IV F P+GW + +G KS
Sbjct: 644 ALMTDNPLEAQVH-MQMLMEIRAETLQDYLNSYKPHFSRIVGFRPSGWNYRPQGAGKSVS 702
Query: 669 RRWQQGTI------------------------------IRYEVPYSEHCSFTELKEFVKF 698
Q GTI + + VPYSEH SF EL F+
Sbjct: 703 ANTQPGTIPTTQILQGKAWRSRFGAKDFVAQRGSTKEAMCFGVPYSEHSSFRELAMFLMA 762
Query: 699 VSPEHIIPSVN 709
+ E ++P+VN
Sbjct: 763 LRIEKVVPTVN 773
>gi|259483913|tpe|CBF79690.1| TPA: interstrand crosslink repair protein (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 832
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 126/415 (30%), Positives = 180/415 (43%), Gaps = 102/415 (24%)
Query: 400 GTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G VDAF+Y + C+ +FL+HFH DHY GL++S+ HG IYCS TA LV ++ +
Sbjct: 401 GFSISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLKVDP 460
Query: 459 DRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQNGKA-------VLHTGDFR 508
+ L +KT + G+ VT +EANHCPGS I LFE VLH GDFR
Sbjct: 461 KWVVDLDFEKKTEVPGTGGVQVTMIEANHCPGSAIFLFEKAVSSGASTRIQRVLHCGDFR 520
Query: 509 FSEEMASMSVLQ------------TCPIHTLILDTTYCNPLYDFPKQEAVIQ-------- 548
S + ++L+ I LDTTY +P Y FP+Q VI
Sbjct: 521 ASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDVINACAELCVR 580
Query: 549 -------------FVIEAIQAESFNP----------------------KTLFLIGSYTIG 573
F +S NP + L +IG+Y+IG
Sbjct: 581 IDQGQYDSLGHMPFQTATPTTKSKNPISKFMSAATAAVKPSTQPEPKGRLLVVIGTYSIG 640
Query: 574 KERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
KER+ L +AR L+ KIY AK RV CL+ E T + ++ +H+ ++ + +
Sbjct: 641 KERICLAIARALKSKIYATPAKQRVCACLE-DPELSALLTDDPLQAQVHMQTLFEIRAET 699
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR---------------WQQGTIIR 678
++ + F+ ++ F PTGWT+ + P R W+ +R
Sbjct: 700 LCDYL-DSMKPHFTRVIGFRPTGWTY-----RPPAGRTLENPPVSTVLYSSHWKTPFSVR 753
Query: 679 --------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ VPYSEH SF EL F + IIP+VN + S M
Sbjct: 754 DLTPQRGSTRESACFGVPYSEHSSFRELTMFCCALRIGRIIPTVNVGSQKSRERM 808
>gi|380496304|emb|CCF31810.1| DNA repair metallo-beta-lactamase [Colletotrichum higginsianum]
Length = 858
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 129/431 (29%), Positives = 190/431 (44%), Gaps = 103/431 (23%)
Query: 377 KHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
+H+A+ K + P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT +
Sbjct: 398 EHSAR--GKPAYQRTCPFYKIMPGFYICVDAFRYGAVKG-CNAYFLSHFHSDHYIGLTAN 454
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIII 491
+ HG IYCS +T LV M++ + ++ L ++ + G+ VT + ANHCPGS +
Sbjct: 455 WTHGPIYCSKVTGDLVKMQLRVAAHWVRPLEFDETVKVPGTEGVTVTMISANHCPGSSLF 514
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTT 532
LFE GK +LH GDFR +L + I LDTT
Sbjct: 515 LFEKSIGKGNSAKKQRILHCGDFRACPAQVGHPLLKPEVQDSISGKTKQQKIDVCYLDTT 574
Query: 533 YCNPLYDFPKQEAVIQFVIEAIQA------------------------------------ 556
Y NP Y FP Q VI+ + ++
Sbjct: 575 YLNPRYSFPPQNDVIKACADMCKSLAPDQSLMDDTWDKINREAGTGTVSKFFTKVNADGE 634
Query: 557 -ESFNPKT------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
NPKT L + G+Y+IGKER+ +A+ L KI+ + +K R+ L E
Sbjct: 635 VSESNPKTAPKERLLVICGTYSIGKERICKAIAQALGSKIFASKSKIRICSKLG-DPELT 693
Query: 610 QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-SKGKKKS-- 666
T N +E+ +H M M + L+ N Y FS IV F P+GW + +G KS
Sbjct: 694 ALMTDNPYEAQVH-MQMLMEIRAETLQEYLNSYKPHFSRIVGFRPSGWNYRPQGASKSVT 752
Query: 667 --------------PGRRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKF 698
+ W Q+G+ + + VPYSEH SF EL F+
Sbjct: 753 ASTQPSIIPTTQIFQAQAWRSRFGAKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFIMS 812
Query: 699 VSPEHIIPSVN 709
+ E ++P+VN
Sbjct: 813 LHIEKVVPTVN 823
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 32/183 (17%)
Query: 25 SQTPKFTTTISKKQKI--PLKPSNNPSRPSKK----PKPVTNLGKENNIEGFYLNSDETC 78
++T F TI + I P K N + P K P P+ +LGK
Sbjct: 155 AKTAGFLGTIRNRPPIVPPPKSEENSTSPVKSEEEDPMPLISLGKH-------------- 200
Query: 79 SLEAIPSSIDCTRPTACVDIDHSPECE-----EIKEILKVNEGYLRNSVESRLLRPRAAD 133
E+ PS+ + + P + ++ S + + E ++ + +G E R++R
Sbjct: 201 --ESTPSAKETSCPPPPMKVEDSIDADFANVDEFGDLDEFPDGEDVGGEEYRMMRFMKEQ 258
Query: 134 CRLSEESEEEEEDAVLDVLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAHTNN 193
RL E+E E+E A D L L D+ + + CP+C + ++ + + H N
Sbjct: 259 ARL--EAEIEDEAAGSDSLDGLVDRGRLGDAMV---ANCPICDVSLAGITPDEATRHVNA 313
Query: 194 CLD 196
CLD
Sbjct: 314 CLD 316
>gi|170087900|ref|XP_001875173.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650373|gb|EDR14614.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 434
Score = 170 bits (431), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 194/408 (47%), Gaps = 52/408 (12%)
Query: 360 TNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHW 418
+N + + K + ++ K + GR+ P + + G P VDAF+Y + +
Sbjct: 3 SNRDNEAWKEAAVAEEKSFRVGKANGGRR--KAPFYKVMQGMPIAVDAFRYGTIPGVTAY 60
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GI 475
FLTH H DHY L+ ++ G IYCS TA L+ + + + LP++ T I G+
Sbjct: 61 FLTHAHSDHYTNLSSTWQSGPIYCSQGTANLIIHMLSVDRKWVHPLPMDVPTIIPNTNGV 120
Query: 476 DVTCLEANHCPGSIIILFE-----PQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHT 526
VT +EANHCPGS + FE P G + LH GDFR S ++ PI
Sbjct: 121 QVTLIEANHCPGSCLFFFEGLQTSPFIGSSKVFRYLHCGDFRASPRHVVHPAVKGKPIDH 180
Query: 527 LILDTTYCNPLYDFPKQEAVI----QFVIEAIQAESFNPKTLFLIGSYTIGKER------ 576
+ LDTTY +P Y FP Q VI +F + ++ + + L ++G+Y+IGKER
Sbjct: 181 VYLDTTYLDPQYTFPPQPLVISACAEFARKMVKHKEVDIHPLVVVGTYSIGKERIPAFLL 240
Query: 577 ---LFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
L + +A L+ KIY +A K +L+C + E T+ ++ +H++P+ + S
Sbjct: 241 TVPLHVAIAHALKTKIYCDARKAAILRCQE-DPELNALLTSKPMDAIVHLVPLGMITS-D 298
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSPG-----RRWQQ------------- 673
LK +++ G ++ ++ F PTGWTFS+ G + P R QQ
Sbjct: 299 GLKTYLDRFKGSYTKVIGFRPTGWTFSQAAGADQLPSVSCTLARTQQKNFTCADLRPSGK 358
Query: 674 --GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
T+ VPYSEH SF EL F +I +VN S M
Sbjct: 359 PTSTLQIIPVPYSEHSSFYELTCFAMSFDWVKMIATVNVGSETSRGKM 406
>gi|322708982|gb|EFZ00559.1| DNA cross-link repair protein pso2/snm1 [Metarhizium anisopliae
ARSEF 23]
Length = 845
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 185/428 (43%), Gaps = 100/428 (23%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y ++G C +FL+HFH DHY GLT ++ HG IYCS +T LV
Sbjct: 378 PFYKIIPGFNICVDAFRYGAVKG-CEAYFLSHFHSDHYIGLTANWMHGPIYCSKVTGSLV 436
Query: 451 NMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEP-------QNGKA 500
++ + L + + G VT + ANHCPGS + LF+ + GK
Sbjct: 437 KQQLRTAAKWVVELDFEKSYDVPGTGGATVTMIPANHCPGSSLFLFQKPADKYTNRRGKR 496
Query: 501 VLHTGDFRFSE------------EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQ 548
+LH GDFR + A+ L I LDTTY NP Y FP Q VI+
Sbjct: 497 ILHCGDFRACPAHVTHPLIKPDIQDATTGKLSQQTIDICYLDTTYLNPRYSFPPQADVIK 556
Query: 549 FVIEAIQAESFNP-------------------------------------------KTLF 565
+ + S +P + L
Sbjct: 557 ACADMCASLSPDPTCKDDFWETGAKEKGAQAVSKYFQSTTQSNGAVGTKTSPKLGQRLLV 616
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ G+Y+IGKER+ + +A+ L+ KI+ K ++ K LD E T+N E+ +H+
Sbjct: 617 VCGTYSIGKERICVAIAKALKSKIFAIPRKIKICKQLD-DPELAGLLTSNPVEAQVHMQS 675
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK------SP----------GR 669
+ + + + L+ N Y G FS IV F P+GW + K SP G+
Sbjct: 676 LMEIRA-ETLQEYLNGYKGHFSRIVGFRPSGWNYRPPSSKQMSADVSPTSIQTQQILHGK 734
Query: 670 RW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDS 715
W Q G+ + + VPYSEH SF EL F+ + E +IP+VN S
Sbjct: 735 GWRSRFGYKDFVAQPGSTKEAMCFGVPYSEHSSFRELSMFIMSLRIEKVIPTVNVGNEKS 794
Query: 716 ANAMVSLL 723
M L
Sbjct: 795 RKRMKGWL 802
>gi|255715219|ref|XP_002553891.1| KLTH0E09570p [Lachancea thermotolerans]
gi|238935273|emb|CAR23454.1| KLTH0E09570p [Lachancea thermotolerans CBS 6340]
Length = 595
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/399 (30%), Positives = 192/399 (48%), Gaps = 75/399 (18%)
Query: 384 SKGRKHKDIPTWCCVPGTPFR-----VDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHH 437
SK R + IP V F+ VD F + H +FL+HFH DHY G+ +S+
Sbjct: 173 SKIRTGRRIPRLPEVKKVRFKNHVINVDGFNFQSDPSIHQYFLSHFHADHYMGVKKSWDQ 232
Query: 438 GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI-AGIDVTCLEANHCPGSIIILFEPQ 496
G IYCS +TA L+ K +P DR+ LP I + + V C +ANHCPG+ + LF
Sbjct: 233 GTIYCSKVTADLLIYKFKVPQDRIIALPAEVTIQISSNVSVICFDANHCPGAFVFLFREF 292
Query: 497 NG-----KAVLHTGDFRFSEEMASMSVLQTC--PIHTLILDTTYCNPLYDFPKQEAVI-- 547
G + VLHTGDFR + ++ + + T PI + LDTTY P Y FP Q++V+
Sbjct: 293 GGDNETVQWVLHTGDFRSNNDLITKIIEHTSGKPIDKVYLDTTYMYPSYHFPLQKSVLDV 352
Query: 548 --------------------QFVIEAIQAESFNPKTL----FLIGSYTIGKERLFLEVAR 583
Q I + + S P+ L F+IG+YTIGKE+L + +A
Sbjct: 353 TGEFAFKLRDVGLKKLFGDRQSSIMSFVSNSLRPRHLYKYVFVIGTYTIGKEKLAIAIAE 412
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDI---QWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
L+ KI+V A+ C+ + +D T + ++ +H++ + TL+S + L++
Sbjct: 413 RLQTKIFV--ARDTARHCIIQTYKDKFPEGMITHDITKACVHLVSLRTLSSKETLQYYFK 470
Query: 641 QYAGRFSLIVAFSPTGWTFSKGKK-----------------------------KSPGRRW 671
+ + +VAF+PTGW+F G + S +++
Sbjct: 471 PISHIYEDMVAFAPTGWSFKNGGRFIKLHETLEQKIEHTVNLLKDSTVDNLDPSSIHKQY 530
Query: 672 QQGTIIR-YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
++ + ++VPYSEH SF +L F + IIP+VN
Sbjct: 531 KRDVRFQVFQVPYSEHSSFKDLANFCVRLPWVKIIPTVN 569
>gi|390600201|gb|EIN09596.1| DRMBL-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 486
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 190/440 (43%), Gaps = 101/440 (22%)
Query: 374 DRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGL 431
DR K RK P + + G P VDAF+Y + G + +FLTH H DHY L
Sbjct: 20 DRNFRPTKANGGRRK---APFYKVMQGMPIAVDAFRYGSIPG-VTAYFLTHAHSDHYTNL 75
Query: 432 TRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGS 488
+ S+ G IYCS T +L+ +G+ + LP +Q+TTI G+ VT L+ANHCPGS
Sbjct: 76 SSSWRSGPIYCSECTGKLIIHMLGVDRKWVHFLPFDQETTIPNTGGVKVTLLDANHCPGS 135
Query: 489 IIILFE-PQNGKA--------------------------VLHTGDFRFSEEMASMSVLQT 521
+ LFE PQ A LH GDFR S + ++
Sbjct: 136 CLFLFEGPQTVNAGDSNYNSPFVPSNSTFKATKQARMFRYLHCGDFRASPRHVNHPAVKG 195
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN--------------------- 560
I + LDTTY + Y FP Q+ VI E + + F
Sbjct: 196 KKIDVVYLDTTYLDLKYCFPPQKLVIDACAELARRKVFGEPDQSTSEKFKAGLGMVTSWV 255
Query: 561 -------------PKT-----LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC- 601
PK L ++G+Y+IGKER+ +A+ L K+Y +A K +L+C
Sbjct: 256 TVQPKRENDGTHVPKAGENRILVIVGTYSIGKERVVKAIAKALSSKVYCDARKAAILRCQ 315
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS- 660
D E + T + ++ +H++P+ + S RLK ++ G FS +AF PTGWTF+
Sbjct: 316 ADSELESL--LTKDPLDATVHLVPL-GMVSSDRLKDYVARWKGAFSRAIAFRPTGWTFTA 372
Query: 661 -KGKKKSP--------------------GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
G +P R T+ Y VPYSEH SF EL F V
Sbjct: 373 PAGTDLAPPIPTVISRSQSRTFDYTHFRPMRNSTPTLQLYGVPYSEHSSFFELTCFALSV 432
Query: 700 SPEHIIPSVNNDGRDSANAM 719
II +VN S M
Sbjct: 433 DWGRIIATVNVGSESSRKKM 452
>gi|340520526|gb|EGR50762.1| hypothetical protein TRIREDRAFT_3027 [Trichoderma reesei QM6a]
Length = 818
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 131/437 (29%), Positives = 189/437 (43%), Gaps = 104/437 (23%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+GR + P + +PG VDAF+Y + G C +FL+HFH DHY GLT ++ HG
Sbjct: 338 SRGRPAYERTCPFYKIMPGFSICVDAFRYGAVEG-CQAYFLSHFHSDHYIGLTANWRHGP 396
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + L + + G D VT + ANHCPGS + LFE
Sbjct: 397 IYCSKVTGSLVKQQLRTAAKWVVELEFEKSYDVPGTDGATVTMMPANHCPGSSLFLFEKP 456
Query: 497 NG-------KAVLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPL 537
G K +LH GDFR + +L+ + ++ LDTTY NP
Sbjct: 457 FGTGPNKRVKRILHCGDFRACPQHVRHPLLKADVVDSISGKTKQQRIDICYLDTTYLNPR 516
Query: 538 YDFPKQEAVIQFVIE---AIQAESF----------------------------------- 559
Y FP Q VIQ + ++ A+S
Sbjct: 517 YSFPPQGDVIQACADMCASMAADSHCADDVWQRSEKSAGTGTMSKYFQSDKPAEDGEESK 576
Query: 560 ----NPKTLFLI--GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
PK L+ G+Y+IGKER+ + +A+ L KI+ + AK ++ K LD E T
Sbjct: 577 SSPSRPKQRLLVICGTYSIGKERICVAIAKALGSKIFASPAKIKICKQLD-DPELTALLT 635
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP------ 667
++ E+ +H M M + L+ + Y F+ IV F P+GW F G
Sbjct: 636 SDPVEAQVH-MQMLMEIRAETLQEYLDSYRPHFTRIVGFRPSGWNFRPGNGSKAIGANTP 694
Query: 668 -----------GRRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPE 702
G+ W Q+G+ + + VPYSEH SF EL FV + +
Sbjct: 695 PSSISTQQLLHGKGWRTRFSAKDLVAQRGSTREAMCFGVPYSEHSSFRELAMFVMGLRID 754
Query: 703 HIIPSVNNDGRDSANAM 719
+IP+VN S M
Sbjct: 755 KVIPTVNVGSEQSRKRM 771
>gi|299117631|emb|CBN75473.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 711
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
V G+PF VD F++ C H+ LTHFH DH GL +SF GKIYCS TA L+ +G+
Sbjct: 11 VEGSPFMVDGFRFTNPRCRHYLLTHFHSDHTTGLYKSFSAGKIYCSHGTANLIVELMGVN 70
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSII-ILFEPQ-NGKAVLHTGDFRFSEEMAS 515
+R+ LP++ +AG D+T ++ANHCP +++ ++ +P+ G+ LHTGDFR +E +
Sbjct: 71 RERVVALPMDTPVLVAGFDLTLIDANHCPAAVMFVIRDPRPGGRTTLHTGDFRAAESVCR 130
Query: 516 MSVLQTCP--IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNPKTLFLIGSYTI 572
V+++ + +L LDTTYC P + FP Q V+ + ++ E +P TLFL+G+Y+I
Sbjct: 131 NPVVKSLKGRLDSLYLDTTYCGPRHTFPDQSEVLAQATQLVRMELQRDPNTLFLVGTYSI 190
Query: 573 GKERLFLEVAR 583
GKE++ VA+
Sbjct: 191 GKEKVLEAVAK 201
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 657 WTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSA 716
WT GKK W G Y +PYSEH SFT+LK+FV+ V P+ I+P+VN S
Sbjct: 364 WT---GKKP-----WVDGVARVYSLPYSEHSSFTQLKDFVRTVRPKKIVPTVNAVSSASV 415
Query: 717 NAMVSLLL 724
M+S L
Sbjct: 416 EKMLSHFL 423
>gi|159473960|ref|XP_001695097.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276031|gb|EDP01805.1| predicted protein [Chlamydomonas reinhardtii]
Length = 550
Score = 169 bits (427), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 46/305 (15%)
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID 476
+ LTHFH DHY+GLT+SF G + S +TARLV ++ +P RL+ LP++ T+ G+
Sbjct: 283 YRILTHFHADHYKGLTKSFSGGVVLASPVTARLVAERLRLPAARLRTLPMDTPVTVDGVT 342
Query: 477 VTCLEANHCPGSIIILFE-------PQNGKAVLHTGDFRFSEEMASMSVL--QTCPIHTL 527
+T ++ANHCPG+ + + E Q + G ++ ++ L + C TL
Sbjct: 343 LTLVDANHCPGAAMFIAEVLPPPPPTQQMQQQQQAGAAGHVKQHPALQALVGRRC---TL 399
Query: 528 ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRK 587
+LDTTY +P Y FP Q+ V+ V+ A++AE+FN + G +G E A
Sbjct: 400 VLDTTYADPAYVFPPQQDVLDAVLTAVRAEAFNKRVGDRAG---VGAE---ARDAGCRLC 453
Query: 588 KIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
+Y + K L + TTN E++IH +P++ + + L + +QY GR+S
Sbjct: 454 AVYCSKEKAATLSACGLAPRYSSLITTNHLEANIHAVPLFKV-TLDGLAAILSQYRGRYS 512
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
++ FS VPYSEH SF+EL+ FV+++ P IIPS
Sbjct: 513 AVIGFS---------------------------VPYSEHSSFSELRSFVRWLQPGRIIPS 545
Query: 708 VNNDG 712
VN DG
Sbjct: 546 VNADG 550
>gi|302687346|ref|XP_003033353.1| hypothetical protein SCHCODRAFT_53758 [Schizophyllum commune H4-8]
gi|300107047|gb|EFI98450.1| hypothetical protein SCHCODRAFT_53758, partial [Schizophyllum
commune H4-8]
Length = 463
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 131/400 (32%), Positives = 177/400 (44%), Gaps = 72/400 (18%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + + G P VDAF+Y + G +FLTH H DHY L+ S+ G IYCS +T
Sbjct: 40 RKAPFYKVLQGMPIAVDAFRYGSIPG-VKAYFLTHAHSDHYTNLSSSWDSGPIYCSEVTC 98
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFE---------- 494
L+ + + L LPL+ T I G+ VT +EANHCPGS + FE
Sbjct: 99 NLIAHMLRVDKKWLHPLPLDTPTEIPDTGGVKVTLIEANHCPGSSLFFFEGRQTVNAGDS 158
Query: 495 ----PQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
P G LH GDFR S ++ I + LDTTY +P Y FP Q V
Sbjct: 159 AFKSPFVGTGRVFRYLHCGDFRASPRHVEHPCVKGKKIDHVYLDTTYLDPKYTFPPQPQV 218
Query: 547 IQFVIEAI------------------------QAESFNPKTLFLIGSYTIGKERLFLEVA 582
I E +A S + + L L+G+Y+IGKER+ +A
Sbjct: 219 IDACAELARRIVNGLPTGTETTMIDGWVSTKEKAASSSDRILVLVGTYSIGKERIAKAIA 278
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQY 642
L KIY + K +L+C + KE T+N E+ +H++P+ + S +LK +Y
Sbjct: 279 HALNSKIYCDNRKAAILRC-EQDKELDALLTSNPREAAVHLVPLGVITS-DKLKPYYERY 336
Query: 643 AGRFSLIVAFSPTGWTFSK--GKKKSP---------GRRWQQGTIIR-----------YE 680
FS V F PTGWTF++ G SP R T +R Y
Sbjct: 337 KDTFSRAVGFRPTGWTFTQPAGTDLSPPIPTIIARGQSRTYAYTDLRPTRNSTPLLQLYG 396
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV 720
VPYSEH SF EL F +I +VN S M
Sbjct: 397 VPYSEHSSFFELTCFALSFDWVRMIATVNVGSEHSRGKMA 436
>gi|50311643|ref|XP_455848.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644984|emb|CAG98556.1| KLLA0F17094p [Kluyveromyces lactis]
Length = 513
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/354 (34%), Positives = 175/354 (49%), Gaps = 73/354 (20%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGK-IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG-I 475
+FL+HFH DHY GL +S+ HG IY S+ TA LV K + +L L LN+ +++ +
Sbjct: 150 YFLSHFHADHYGGLKKSWSHGTTIYTSVYTANLVKWKFKVNQCKLIGLSLNEWHSVSNEV 209
Query: 476 DVTCLEANHCPGSIIILF-EPQNGKAVLHTGDFRFSEEMAS--MSVLQTCPIHTLILDTT 532
V L+ANHCPGS+I LF + + VLHTGDFR +E + + S+LQ + + LDTT
Sbjct: 210 RVILLDANHCPGSVIFLFHDLRRNSFVLHTGDFRANERIITEVNSLLQGNSLSLIYLDTT 269
Query: 533 YCNPLYDFPKQEAVIQFVIE--AIQAE----------------------SFNPKTLFLIG 568
Y NP + FP V + + ++ AE S LF++
Sbjct: 270 YLNPFFKFPALPKVCEVTADFASLLAENGLNTFLNRSDSQRSISQYLGLSQTKPILFVVL 329
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF-----TTNEHESHIHV 623
SY+IGKE L + +A+ L+ ++YV K++++ K+ I WF TT+ S++H+
Sbjct: 330 SYSIGKEHLAISIAKKLKTQLYVPHTKYQLV------KQYISWFPEGLLTTDHKSSNVHL 383
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS-------PGRRW----- 671
+ M T K L +SN F IV F PTGWTFS KS + W
Sbjct: 384 VAMHTDLD-KYLSQLSNM----FDSIVVFRPTGWTFSNQYDKSYTLWDEFERKNWVKDTL 438
Query: 672 ----------------QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
QG I + VPYSEH SF +L F + + IIP+VN
Sbjct: 439 SGETPFAIDYFTKQKRSQGKIYHFNVPYSEHSSFKDLCLFSTKLKWDKIIPTVN 492
>gi|207342260|gb|EDZ70073.1| YMR137Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 616
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 164/327 (50%), Gaps = 62/327 (18%)
Query: 400 GTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHH-------GKIYCSLITARLVN 451
G VD F Y + S +FL+HFH DHY GL +S+++ +YCS ITA LVN
Sbjct: 225 GHEIVVDGFNYKASETISQYFLSHFHSDHYIGLKKSWNNPDENPIKKTLYCSKITAILVN 284
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLH 503
+K IP D +Q+LP+N++ I I V L+ANHCPG+II+LF+ + + +LH
Sbjct: 285 LKFKIPMDEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILH 344
Query: 504 TGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAI 554
TGDFR + +M ++ I + LDTTY Y+FP Q E V F + I
Sbjct: 345 TGDFRSNAKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLI 404
Query: 555 Q----------------------AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV- 591
+ + + LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 405 KHGKNKTFGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVM 464
Query: 592 -NAAKFRVLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTLAS-------FKRLKH 637
N+ KF ++ + + E D T+N HES +H++P+ L S K LK
Sbjct: 465 PNSVKFSMMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKE 524
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKGKK 664
+ Y +V F PTGW+ + G K
Sbjct: 525 LETDYVKDIEDVVGFIPTGWSHNFGLK 551
>gi|398410702|ref|XP_003856699.1| hypothetical protein MYCGRDRAFT_54222, partial [Zymoseptoria
tritici IPO323]
gi|339476584|gb|EGP91675.1| hypothetical protein MYCGRDRAFT_54222 [Zymoseptoria tritici IPO323]
Length = 618
Score = 168 bits (426), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 190/422 (45%), Gaps = 113/422 (26%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y ++G C +FL+HFH DHY GLT ++ HG IYCS +TA LV
Sbjct: 176 PFYKILPGLFICVDAFRYGAVKG-CQAYFLSHFHSDHYIGLTSTWTHGPIYCSKVTANLV 234
Query: 451 NMK--------IGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA-- 500
+ I + W++ +P + G+ VT + ANHCPGS + LFE G+
Sbjct: 235 KQQLRVDPKYVIALDWEKPWEIPGTK-----GVTVTMISANHCPGSSLYLFEKTIGRKTN 289
Query: 501 -------VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFP 541
+LH GDFR +L + I LDTTY NP Y FP
Sbjct: 290 GEPRQQRILHCGDFRACRMHVEHPLLMPDIRDKVTGKTKEQKIDVCYLDTTYLNPKYAFP 349
Query: 542 KQEAVI------------------------------QFVIEAIQAES---------FNP- 561
+QEAVI + +++ ++ ES +P
Sbjct: 350 EQEAVIKACADMCVCLSKDTPDETDGWEQMKRQRAGEGMVKFVRKESNTAIKEEEPVDPS 409
Query: 562 ----------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
+ L ++G+Y+IGKER+ L +AR L+ KIY +K R++ L+ + D
Sbjct: 410 SVGNMKKTRGRLLVVVGTYSIGKERICLGIARALQAKIYAPPSKQRIVAALEDPELD-SL 468
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP- 667
T+N E+ +H+ P++ + + + L + F+ V F P+GW + + SP
Sbjct: 469 MTSNPREAQVHMTPLFEIRA-ETLDDYLKDFFPHFTRAVGFRPSGWNYRPPNSRFVESPL 527
Query: 668 ------GRRWQQGTIIR--------------YEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
W+ G +R + VPYSEH SF EL F + E IIP+
Sbjct: 528 VQTVLHSDNWKSGYSMRELVPQRGSTSRASCFGVPYSEHSSFRELTMFCCALRIEKIIPT 587
Query: 708 VN 709
VN
Sbjct: 588 VN 589
>gi|327349624|gb|EGE78481.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis ATCC 18188]
Length = 845
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 185/428 (43%), Gaps = 95/428 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG+
Sbjct: 395 SRGKQAFERTCPFYKILPGFSICVDAFRYGAVEG-CRAYFLSHFHSDHYIGLTSSWCHGQ 453
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + + ++ I G VT L ANHCPGS I LFE Q
Sbjct: 454 IYCSTVTGNLVRQQLKVDPKWITDIDFDKTFEIPQTNGAWVTMLPANHCPGSSIFLFEKQ 513
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPL 537
+LH GDFR +L+ + +L LDTTY NP
Sbjct: 514 VNTGPKPRVHRILHCGDFRACPAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLNPK 573
Query: 538 YDFPKQ----------------------------------EAVIQFVIEAIQAES----F 559
Y FP Q + V+ A QA +
Sbjct: 574 YAFPNQDDVVAACAAVCADLDPTQHGDSDDTTRGPTTTTVKTVMDLGFNAPQAPTRLRDA 633
Query: 560 NPKT----LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
N K+ L +IG+Y+IGKERL + +AR L KIY AAK R+ CL+ E + T N
Sbjct: 634 NSKSRGRLLVVIGTYSIGKERLCMAIARALNCKIYAPAAKQRICACLE-DAELSRLLTNN 692
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK-------------- 661
E+ +H+ + + + L ++ N FS +V F PTGW +
Sbjct: 693 PIEAQVHMQTLMEVRAETLLDYL-NSLKPHFSRVVGFRPTGWNYRPPAGRMTDSPPVSSV 751
Query: 662 ----------GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
G K +R Y VPYSEH SF EL F + +IP+VN
Sbjct: 752 LYSDSWKPRFGTKDLIPQRGSNRQSTCYSVPYSEHSSFRELTMFCCALRIAKVIPTVNVG 811
Query: 712 GRDSANAM 719
+ S M
Sbjct: 812 SKRSREKM 819
>gi|261203089|ref|XP_002628758.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis SLH14081]
gi|239586543|gb|EEQ69186.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis SLH14081]
Length = 845
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 185/428 (43%), Gaps = 95/428 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG+
Sbjct: 395 SRGKQAFERTCPFYKILPGFSICVDAFRYGAVEG-CRAYFLSHFHSDHYIGLTSSWCHGQ 453
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + + ++ I G VT L ANHCPGS I LFE Q
Sbjct: 454 IYCSTVTGNLVRQQLKVDPKWITDIDFDKTFEIPQTNGAWVTMLPANHCPGSSIFLFEKQ 513
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPL 537
+LH GDFR +L+ + +L LDTTY NP
Sbjct: 514 INTGPKPRVHRILHCGDFRACPAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLNPK 573
Query: 538 YDFPKQ----------------------------------EAVIQFVIEAIQAES----F 559
Y FP Q + V+ A QA +
Sbjct: 574 YAFPNQDDVVAACAAVCADLDPTQHGDSDDTTRGPTTTTVKTVMDLGFNAPQAPTRLRDA 633
Query: 560 NPKT----LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
N K+ L +IG+Y+IGKERL + +AR L KIY AAK R+ CL+ E + T N
Sbjct: 634 NSKSRGRLLVVIGTYSIGKERLCMAIARALNCKIYAPAAKQRICACLE-DAELSRLLTNN 692
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK-------------- 661
E+ +H+ + + + L ++ N FS +V F PTGW +
Sbjct: 693 PIEAQVHMQTLMEVRAETLLDYL-NSLKPHFSRVVGFRPTGWNYRPPAGRMTDSPPVSSI 751
Query: 662 ----------GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
G K +R Y VPYSEH SF EL F + +IP+VN
Sbjct: 752 LYSDSWKPRFGTKDLLPQRGSNRQSTCYSVPYSEHSSFRELTMFCCALRIAKVIPTVNVG 811
Query: 712 GRDSANAM 719
+ S M
Sbjct: 812 SKRSREKM 819
>gi|67901204|ref|XP_680858.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
gi|40742979|gb|EAA62169.1| hypothetical protein AN7589.2 [Aspergillus nidulans FGSC A4]
Length = 2412
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 179/410 (43%), Gaps = 92/410 (22%)
Query: 400 GTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G VDAF+Y + C+ +FL+HFH DHY GL++S+ HG IYCS TA LV ++ +
Sbjct: 1428 GFSISVDAFRYGAVESCNAYFLSHFHSDHYIGLSKSWRHGPIYCSRATANLVRQQLKVDP 1487
Query: 459 DRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQNGKA-------VLHTGDFR 508
+ L +KT + G+ VT +EANHCPGS I LFE VLH GDFR
Sbjct: 1488 KWVVDLDFEKKTEVPGTGGVQVTMIEANHCPGSAIFLFEKAVSSGASTRIQRVLHCGDFR 1547
Query: 509 FSEEMASMSVLQ------------TCPIHTLILDTTYCNPLYDFPKQEAVIQ-------- 548
S + ++L+ I LDTTY +P Y FP+Q VI
Sbjct: 1548 ASPQHVQHALLRPDVVDPKTGKRWQQRIDACYLDTTYLSPKYAFPRQSDVINACAELCVR 1607
Query: 549 -------------FVIEAIQAESFNP----------------------KTLFLIGSYTIG 573
F +S NP + L +IG+Y+IG
Sbjct: 1608 IDQGQYDSLGHMPFQTATPTTKSKNPISKFMSAATAAVKPSTQPEPKGRLLVVIGTYSIG 1667
Query: 574 KERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
KER+ L +AR L+ KIY AK RV CL+ E T + ++ +H+ ++ + +
Sbjct: 1668 KERICLAIARALKSKIYATPAKQRVCACLE-DPELSALLTDDPLQAQVHMQTLFEIRAET 1726
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS----------PGRRWQQGTIIR----- 678
++ + F+ ++ F PTGWT+ ++ W+ +R
Sbjct: 1727 LCDYL-DSMKPHFTRVIGFRPTGWTYRPPAGRTLENPPVSTVLYSSHWKTPFSVRDLTPQ 1785
Query: 679 ---------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ VPYSEH SF EL F + IIP+VN + S M
Sbjct: 1786 RGSTRESACFGVPYSEHSSFRELTMFCCALRIGRIIPTVNVGSQKSRERM 1835
>gi|409041196|gb|EKM50682.1| hypothetical protein PHACADRAFT_166360 [Phanerochaete carnosa
HHB-10118-sp]
Length = 461
Score = 167 bits (424), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 186/410 (45%), Gaps = 79/410 (19%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + + G P VDAF+Y + G + +FLTH H DHY L+ ++ G IYCS TA
Sbjct: 31 RKAPFYKVMQGMPIAVDAFRYGTIPG-VTAYFLTHAHSDHYTNLSSNWKSGAIYCSEGTA 89
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQN----GKA 500
L+ + + + LP++ T + G+ VT +EANHCPGS + LFE Q G +
Sbjct: 90 NLIVHMLRVDRKWVHALPMDATTVVPNTGGVTVTLIEANHCPGSCLFLFEGQQTVNAGDS 149
Query: 501 V--------------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
LH GDFR S + ++ I T+ LDTTY +P Y FP Q V
Sbjct: 150 AYKSTFVGSKRIFRYLHCGDFRASPQHVMHPAVRGKRIDTVYLDTTYLDPKYCFPPQSEV 209
Query: 547 IQFVIEAI-----------------QAESF--------------NPKTLFLIGSYTIGKE 575
I E + + F +TL ++G+Y+IGKE
Sbjct: 210 ISACAELARRIVLDESSHVDTARNSRVDDFFSVHEKPKEKEVAKTERTLVIVGTYSIGKE 269
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
R+ +A+ L+ K+Y ++ K +L+C ++ D T++ ++ +H++P+ ++S +L
Sbjct: 270 RIVKAIAKALQTKVYSDSRKTAILRCQADAELDAL-LTSDPLQAGVHLLPLGAISS-DKL 327
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTF--SKGKKKSP--------------------GRRWQQ 673
K Q+ G ++ + F PTGWTF SKG SP +
Sbjct: 328 KAYMEQWNGHWTRAIGFRPTGWTFTPSKGSDTSPSIPSVIAKSQVKLFTFADISASKNST 387
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+ Y VPYSEH SF EL F +I +VN S M +
Sbjct: 388 PNLQLYGVPYSEHSSFFELTCFALSFDWGRMIATVNVGSEVSRGKMAKWV 437
>gi|302923351|ref|XP_003053657.1| hypothetical protein NECHADRAFT_65714 [Nectria haematococca mpVI
77-13-4]
gi|256734598|gb|EEU47944.1| hypothetical protein NECHADRAFT_65714 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 125/421 (29%), Positives = 186/421 (44%), Gaps = 97/421 (23%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y + G C +FL+HFH DHY GLT + HG IYCS +T LV
Sbjct: 374 PFYKIMPGFSICVDAFRYGAVEG-CKAYFLSHFHSDHYIGLTAKWRHGPIYCSKVTGSLV 432
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEP--QNG-----KA 500
++ + L + I G D VT + ANHCPGS + LF+ ++G +
Sbjct: 433 KQQLRTAEKWVVELEFEKPYDIPGTDGASVTMIPANHCPGSSLFLFQKNMRHGIGSRVQR 492
Query: 501 VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQEAVIQ 548
+LH GDFR +L+ + ++ LDTTY NP Y FP Q VI+
Sbjct: 493 ILHCGDFRACPAQVQHPLLKPEIVDSISGKVKQQKIDICYLDTTYLNPRYSFPPQNDVIK 552
Query: 549 FVIEAIQAESFNP-----------------------------------------KTLFLI 567
+ + S +P + L +
Sbjct: 553 ACADLCGSMSPDPDCKDDVWEKSNAQGTQGVSKFFKGPKSNETGKDGAKKGPRKRLLVIC 612
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G+Y+IGKER+ + +A+ L+ KI+ + K ++ K L E T++ E+ +H+ +
Sbjct: 613 GTYSIGKERICISIAKALKSKIFASPGKIKICKQLG-DPELTALLTSDPLEAQVHMQMLM 671
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-----SKGKKKSP----------GRRW- 671
L + + L+ N Y FS IV F P+GW F + G SP G+ W
Sbjct: 672 ELRA-ETLQEYLNSYKPHFSRIVGFRPSGWNFRPAGKAIGANTSPGSIQTEQILHGKGWR 730
Query: 672 ----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANA 718
Q+G+ + + VPYSEH SF EL FV + E ++P+VN S
Sbjct: 731 TRFGYKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFVMSLRIERVVPTVNVGSEQSRKR 790
Query: 719 M 719
M
Sbjct: 791 M 791
>gi|408400662|gb|EKJ79739.1| hypothetical protein FPSE_00019 [Fusarium pseudograminearum CS3096]
Length = 844
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 190/437 (43%), Gaps = 99/437 (22%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
AA++ S+G++ + P + +PG VDAF+Y ++G C +FL+HFH DHY GLT
Sbjct: 364 AAENASRGKQAYERTCPFYKIMPGFSICVDAFRYGAVQG-CKAYFLSHFHSDHYIGLTAR 422
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIII 491
+ HG IYCS +T LV ++ + L ++ I G + VT + ANHCPGS +
Sbjct: 423 WCHGPIYCSKVTGSLVKNQLRTAAKWVVELEFDKPYDIPGTEGATVTMIPANHCPGSSLF 482
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTT 532
LFE + +LH GDFR +L+ + ++ LDTT
Sbjct: 483 LFEKTMKQGSNSRVQRILHCGDFRACPAHVKHPLLKPDIVDSISGKIKQQKIDICYLDTT 542
Query: 533 YCNPLYDFPKQEAVIQFVIEAIQAESFNP------------------------------- 561
Y NP Y FP Q VI+ + + S +P
Sbjct: 543 YLNPKYSFPPQNDVIKACADLCGSMSPDPNCKDDIWEKASGQGTPAVSKFFPNTKSDEND 602
Query: 562 ----------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
+ L + G+Y+IGKER+ + +A+ L+ KI+ K ++ K LD E
Sbjct: 603 NVDTKKKPPQRLLVICGTYSIGKERICISIAKALKSKIFATPGKIKICKQLD-DPELSAL 661
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-----SKGKKKS 666
T++ E+ +H M M + L+ N Y FS IV P+GW F S G
Sbjct: 662 LTSDPLEAQVH-MQMLMEIRAETLQEYLNSYKPYFSRIVGLRPSGWNFRPAGKSFGANTQ 720
Query: 667 PG----------RRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPE 702
PG W Q+G+ + + VPYSEH SF EL F+ + E
Sbjct: 721 PGSIHTQQILHDSNWRTRFGYKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFLMTLRIE 780
Query: 703 HIIPSVNNDGRDSANAM 719
I+P+VN S M
Sbjct: 781 KIVPTVNVGSEQSRKRM 797
>gi|342874373|gb|EGU76387.1| hypothetical protein FOXB_13065 [Fusarium oxysporum Fo5176]
Length = 849
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 194/441 (43%), Gaps = 99/441 (22%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
AA+ S+G++ + P + +PG VDAF+Y ++G C +FL+HFH DHY GLT
Sbjct: 369 AAEHASRGKQAYERTCPFYKIMPGFSICVDAFRYGAVQG-CKAYFLSHFHSDHYIGLTAR 427
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIII 491
+ HG IYCS +T LV ++ + L ++ I G + VT + ANHCPGS +
Sbjct: 428 WCHGPIYCSKVTGSLVRNQLRTAAKWVVELEFDKSYDIPGTEGAKVTMIPANHCPGSSLF 487
Query: 492 LFE------PQNG-KAVLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTT 532
LFE P + + +LH GDFR +L+ I + LDTT
Sbjct: 488 LFEKTMKQDPNSRVQRILHCGDFRACPAHVKHPLLKPETIDAISGKAKQQKIDICYLDTT 547
Query: 533 YCNPLYDFPKQEAVIQFVIEAIQAESFNP------------------------------- 561
Y NP Y FP Q VI+ + + S +P
Sbjct: 548 YLNPRYSFPPQNDVIKACADLCGSLSPDPNYKDDIWEKASGQGTPAVSKFFPNTKPDENA 607
Query: 562 ----------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
+ L + G+Y+IGKER+ + +A+ L+ KI+ + K ++ K LD E
Sbjct: 608 KVDTKKKHPQRLLVICGTYSIGKERICISIAKALKSKIFASPGKIKICKQLD-DPELTAL 666
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-----SKGKKKS 666
T++ E+ +H M M + L+ N Y FS IV P+GW F + G
Sbjct: 667 LTSDPLEAQVH-MQMLMEIRAETLQEYLNSYKPYFSRIVGLRPSGWNFRPAGKTIGANTP 725
Query: 667 PG----------RRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPE 702
PG + W Q+G+ + + VPYSEH SF EL FV + E
Sbjct: 726 PGSIHTQQILHDKGWRTRFGYKDFIPQRGSTKEAMCFGVPYSEHSSFRELAMFVMSLRIE 785
Query: 703 HIIPSVNNDGRDSANAMVSLL 723
+IP+VN S M + +
Sbjct: 786 KVIPTVNVGSEQSRKRMKAWI 806
>gi|67473862|ref|XP_652680.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56469553|gb|EAL47293.1| hypothetical protein, conserved [Entamoeba histolytica HM-1:IMSS]
gi|449704840|gb|EMD45008.1| DNA repair metallobeta-lactamase, putative [Entamoeba histolytica
KU27]
Length = 396
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/334 (32%), Positives = 170/334 (50%), Gaps = 24/334 (7%)
Query: 396 CCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
C + F VDAFKY ++ L+HFH DHY GL+ + G I + IT LV K
Sbjct: 23 CKLLFNEFIVDAFKYQIKGYKYFLLSHFHSDHYLGLSSRWKCGIIIGTEITLNLVRYKFK 82
Query: 456 IPWDRLQVLPLNQKTTIAGID-----VTCLEANHCPGS-IIILFEPQNGKAVLHTGDFRF 509
+ + L V+PLN T G + VT +EA H PGS ++ +G LH GDFRF
Sbjct: 83 VENEYLYVIPLNTPTYFEGSNNDGYIVTAIEAGHAPGSCCFVIKRISDGIIYLHVGDFRF 142
Query: 510 SEEMAS----MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
+ + + T I+TL LDTTYC+P Y F +++ + ++ ++ KTLF
Sbjct: 143 DSTLQNDKNWKEYVFTQHINTLFLDTTYCDPQYKFKERQIICNEAVKIVKQSM--GKTLF 200
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
++ +YTIGKE E+AR KI+V+ K+ ++K K D+ +T E I
Sbjct: 201 IVQTYTIGKEMFVEEIARQTGIKIHVDENKYSIVK---LCKRDLSLYTLEESSLEIRTST 257
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ + ++ +Q ++ I+ F PTGW KK + ++ + Y++PYSE
Sbjct: 258 SNSSITSLTVE--LSQLPNKYDRIIIFQPTGW----AKKTTCKGSFE---VKEYKMPYSE 308
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
H SF EL + K + +H+IPSV +G+ S +
Sbjct: 309 HSSFNELIDCYKMIHADHVIPSVIGEGQTSQKII 342
>gi|444317116|ref|XP_004179215.1| hypothetical protein TBLA_0B08800 [Tetrapisispora blattae CBS 6284]
gi|387512255|emb|CCH59696.1| hypothetical protein TBLA_0B08800 [Tetrapisispora blattae CBS 6284]
Length = 676
Score = 166 bits (421), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 126/409 (30%), Positives = 192/409 (46%), Gaps = 105/409 (25%)
Query: 405 VDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP-----W 458
VD F Y + + +FL+HFH DHY G+ +S+ +G +YCS ITA L+ K IP +
Sbjct: 257 VDGFNYSINSNIKQYFLSHFHSDHYIGMKKSWRNGVVYCSQITANLLRNKFNIPITNYDY 316
Query: 459 DRLQV--------------LPLNQKTTI-AGIDVTCLEANHCPGSIIILFEPQNGK---- 499
D ++ LP+N+ I I V ++ANHCPG++I LF+ +
Sbjct: 317 DEMERSEEEAKEDVMEIVELPMNRPYWINKNISVILIDANHCPGAVIFLFQQYSDDLTRI 376
Query: 500 --AVLHTGDFRFSEEMASMSVLQTCP-----IHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
+LHTGDFR+S EM +++L+ P I + LDTTY +P+Y+FP Q+ V+Q +
Sbjct: 377 EYQILHTGDFRYSNEM-ELNILKYLPDYNKKIDEIYLDTTYISPMYNFPLQQNVLQVTSQ 435
Query: 553 AI-------QAESFNPKTL--------------FLIGSYTIGKERLFLEVARVLRKKIYV 591
I + E FN K + FLIGSY+IGKERL + +A+ L+ KIY
Sbjct: 436 FISLYRDQNKREMFNDKQMKLSMVVNDFQFNKIFLIGSYSIGKERLSIAIAQRLQTKIYT 495
Query: 592 -NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL-- 648
+ KF V++ + + + + E +H++ M TL R +QY +L
Sbjct: 496 SDKRKFEVMQMTEIFPAGL--LSEDLEECQVHIVSMNTL----RDSTSVDQYVKEINLRS 549
Query: 649 --------IVAFSPTGWTFSKGKKKSPGRRW----------------------------- 671
+V PTGWTF + +P R +
Sbjct: 550 DKKLIANEVVGIIPTGWTFH--NRWAPERTFNNINERIEYCRDVLTQDEMDGFSIDSLYK 607
Query: 672 QQGTIIRYE---VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSAN 717
Q ++ +Y+ VPYSEH SF +L + + I P+VN D + N
Sbjct: 608 QYKSMKKYQIFKVPYSEHSSFKDLMKACVGLDWGVIKPTVNLDKIEEMN 656
>gi|403215975|emb|CCK70473.1| hypothetical protein KNAG_0E02110 [Kazachstania naganishii CBS
8797]
Length = 557
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 200/427 (46%), Gaps = 86/427 (20%)
Query: 359 PTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVP---GTPFRVDAFKYLRGDC 415
P Q GS+ + KK + R + +P + + G VD F Y + DC
Sbjct: 131 PARPQGGSKVN----SPKKQTGDHTTTPRPRRRLPAYKILEFTNGHKLVVDGFNYEKDDC 186
Query: 416 -SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG 474
+FL+HFH DHYQGL +S+ +G++YCS ITA+L+ K P + + +L ++T +
Sbjct: 187 IKEYFLSHFHSDHYQGLKKSWGNGEVYCSYITAQLLCQKFNFPRELVHILNNGERTMVHD 246
Query: 475 -IDVTCLEANHCPGSIIILFEPQNG-----KAVLHTGDFRFSEEMASMSVLQTCP----- 523
I V L+ANHCPG+ I LF+ +G K ++HTGDFR ++ M + + + P
Sbjct: 247 RISVVPLDANHCPGAQIFLFQEHDGAGRIVKQIIHTGDFRATDAMV-VELEKFLPSSNSV 305
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN---PKT----------------L 564
I + LDTTY P + P Q+ V+ + + ++ P+T +
Sbjct: 306 IDEIYLDTTYMKPNHTHPTQQTVVDVTSSFVTEDWYSKKRPRTVMDFARATPAAPERRKM 365
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L+GSY IGKE+L LE+AR L ++V N K R + LD D EH S +H+
Sbjct: 366 VLVGSYVIGKEKLALEIARRLDTSVHVQNKNKLRQI-VLDGQMGDA------EH-SQVHM 417
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFS----------------KGK- 663
+P+ L + + L ++ PTGWTF KG
Sbjct: 418 VPLGILRDDAAISTYLREECRVNWLNVDVIGVVPTGWTFGNRYSTSVEIGNKCEYVKGAV 477
Query: 664 -------------KKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
+++P R++Q Y+VPYSEH +F EL F+ + E +IP+VN
Sbjct: 478 TFESTFDKSWFSGQETPYRKFQI-----YKVPYSEHSNFVELLRFLCALQWERVIPTVNV 532
Query: 711 DGRDSAN 717
+ D N
Sbjct: 533 NRYDEMN 539
>gi|395326663|gb|EJF59070.1| DRMBL-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 496
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 184/418 (44%), Gaps = 87/418 (20%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
+ P + + G P VDAF+Y + + +FLTH H DHY L+ + G IYCS TA
Sbjct: 58 RKAPFYKVMQGMPIAVDAFRYGTIPNVTAYFLTHAHSDHYTNLSARWDSGPIYCSEGTAN 117
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQN-------- 497
L+ +G+ + LP++ TTI G+ VT +EANHCPGS + LFE +
Sbjct: 118 LIIHMLGVDPKWVHALPMDVATTIPNTGGVQVTLIEANHCPGSCLFLFEGKQTVNAGDSA 177
Query: 498 ------GKA----VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
G A LH GDFR S + ++ I LDTTY +P Y FP Q VI
Sbjct: 178 YKSSYVGSAKIFRYLHCGDFRASPQHVLHPAIKGKRIDHCYLDTTYLDPKYCFPPQPLVI 237
Query: 548 QFVIE----AIQAESF--------NPKT---------------------------LFLIG 568
E +Q +S P+T L ++G
Sbjct: 238 SACAELARRLVQGKSVEDKAGGEAKPRTVTGWFTRVEKSEKGKEKEKAIASSEKILIVVG 297
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
+Y+IGKER+ +AR L K+Y + K +L+C + D TT+ + +H++P+
Sbjct: 298 TYSIGKERILKAIARALDTKVYCDPRKAAILRCQSDPELDAL-LTTDPFTAGVHLVPLAI 356
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTF----------------SKGKKKS------ 666
+AS RLK ++ G +S ++ F PTGWTF S+ + ++
Sbjct: 357 IAS-DRLKTYMERWKGHWSKVIGFRPTGWTFTAPNGTDMLPSIPTVISRSQSRTFTHANL 415
Query: 667 -PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
P R + Y VPYSEH SF EL F +I +VN S M +
Sbjct: 416 QPARN-STAALQVYGVPYSEHSSFFELTCFALSFEWTRMIATVNVGSEASRGKMAKWV 472
>gi|46105466|ref|XP_380537.1| hypothetical protein FG00361.1 [Gibberella zeae PH-1]
Length = 845
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/437 (29%), Positives = 190/437 (43%), Gaps = 99/437 (22%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
AA++ S+G++ + P + +PG VDAF+Y ++G C +FL+HFH DHY GLT
Sbjct: 365 AAENASRGKQAYERTCPFYKIMPGFSICVDAFRYGAVQG-CKAYFLSHFHSDHYIGLTAR 423
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIII 491
+ HG IYCS +T LV ++ + L ++ I G + VT + ANHCPGS +
Sbjct: 424 WCHGSIYCSKVTGSLVKNQLRTAAKWVVELEFDKPYDIPGTEGATVTMIPANHCPGSSLF 483
Query: 492 LFEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTT 532
LFE + +LH GDFR +L+ + ++ LDTT
Sbjct: 484 LFEKTMKQGANSRVQRILHCGDFRACPAHVKHPLLKPDIVDSISGKIKQQKIDICYLDTT 543
Query: 533 YCNPLYDFPKQEAVIQFVIEAIQAESFNP------------------------------- 561
Y NP Y FP Q VI+ + + S +P
Sbjct: 544 YLNPKYSFPPQNDVIKACADLCGSMSPDPNCKDDIWEKAGGQGTLAVSKFFPNTKYDEND 603
Query: 562 ----------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
+ L + G+Y+IGKER+ + +A+ L+ KI+ K ++ K LD E
Sbjct: 604 KLDTKKKPPQRLLVICGTYSIGKERICISIAKALKSKIFATPGKIKICKQLD-DPELSAL 662
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF-----SKGKKKS 666
T++ E+ +H M M + L+ N Y FS IV P+GW F S G
Sbjct: 663 LTSDPLEAQVH-MQMLMEIRAETLQEYLNSYKPHFSRIVGLRPSGWNFRPAGKSFGANTP 721
Query: 667 PG----------RRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPE 702
PG W Q+G+ + + VPYSEH SF EL F+ + E
Sbjct: 722 PGSIHTQQILHDSNWRTRFGYKDFVPQRGSTKEAMCFGVPYSEHSSFRELAMFLMTLRIE 781
Query: 703 HIIPSVNNDGRDSANAM 719
++P+VN S M
Sbjct: 782 KVVPTVNVGSEQSRKRM 798
>gi|239608422|gb|EEQ85409.1| DNA repair protein Pso2/Snm1 [Ajellomyces dermatitidis ER-3]
Length = 845
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 132/428 (30%), Positives = 185/428 (43%), Gaps = 95/428 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG+
Sbjct: 395 SRGKQAFERTCPFYKILPGFSICVDAFRYGAVEG-CRAYFLSHFHSDHYIGLTSSWCHGQ 453
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + + ++ I G VT L ANHCPGS I LFE Q
Sbjct: 454 IYCSTVTGNLVRQQLKVDPKWITDIDFDKTFEIPQTNGAWVTMLPANHCPGSSIFLFEKQ 513
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPL 537
+LH GDFR +L+ + +L LDTTY +P
Sbjct: 514 VNTGPKPRVHRILHCGDFRACPAHVQHPLLRPDVVDSLTGKVKQQLIDVCYLDTTYLSPK 573
Query: 538 YDFPKQ----------------------------------EAVIQFVIEAIQAES----F 559
Y FP Q + V+ A QA +
Sbjct: 574 YAFPNQDDVVAACAAVCADLDPTQHGDSDDTTRGPTTTTVKTVMDLGFNAPQAPTRLRDA 633
Query: 560 NPKT----LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
N K+ L +IG+Y+IGKERL + +AR L KIY AAK R+ CL+ E + T N
Sbjct: 634 NSKSRGRLLVVIGTYSIGKERLCMAIARALNCKIYAPAAKQRICACLE-DAELSRLLTNN 692
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK-------------- 661
E+ +H+ + + + L ++ N FS +V F PTGW +
Sbjct: 693 PIEAQVHMQTLMEVRAETLLDYL-NSLKPHFSRVVGFRPTGWNYRPPAGRMTDSPPVSSV 751
Query: 662 ----------GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
G K +R Y VPYSEH SF EL F + +IP+VN
Sbjct: 752 LYSDSWKPRFGTKDLIPQRGSNRQSTCYSVPYSEHSSFRELTMFCCALRIAKVIPTVNVG 811
Query: 712 GRDSANAM 719
+ S M
Sbjct: 812 SKRSREKM 819
>gi|393240522|gb|EJD48048.1| DRMBL-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 575
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 192/429 (44%), Gaps = 98/429 (22%)
Query: 385 KGRKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
KG + K P + + G P VDAF+Y + + +FL+H H DHY L+ S+ HG IYCS
Sbjct: 123 KGGRRK-APFYKVMQGMPIAVDAFRYGKIPGVTAYFLSHAHSDHYTNLSSSWEHGPIYCS 181
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTT-----IAGIDVTCLEANHCPGSIIILFEPQN- 497
+ TA L+ +G+ DR V PL + T G++VT +EANHCPGS + LF +
Sbjct: 182 VTTANLIVHLLGV--DRKWVHPLPEDTPTVVPDTGGVEVTVIEANHCPGSSLFLFSGKQT 239
Query: 498 ---GKAV--------------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDF 540
G + LH GDFR S ++ + + LDTTY N Y F
Sbjct: 240 VNAGDSAFHSHGVGADKVFRYLHCGDFRASPRHVMHPAIKGKRLDLIYLDTTYLNAKYCF 299
Query: 541 PKQEAVIQF-------VIE---AIQAESFN------------------------------ 560
P Q VI+ ++E ++ A+S +
Sbjct: 300 PPQAQVIEACADLAKQIVEKANSLGADSGSSPVSGMMDAFVKTQGKGKEKEKEKENAGPV 359
Query: 561 -------PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
K L ++G+Y+IGKER+ +A+ L K++ ++ K +LKC E +
Sbjct: 360 AGTSTGKSKMLVVVGTYSIGKERIVKAIAKALNAKVFCDSRKRAILKC-QADPELHAMLS 418
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS--KGKKKSP---- 667
+N + +HV+P+ ++ S +++ ++ G F ++AF PTGWT++ G SP
Sbjct: 419 SNPKTALVHVVPLQSI-SVEKMDEYLDKMGGTFDRVLAFRPTGWTYTPPTGTDLSPAIST 477
Query: 668 ------GR----------RWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
GR R I+ Y VPYSEH SF EL F V +I +VN
Sbjct: 478 VLARADGRPFTAASLKPGRGSSARIMLYGVPYSEHSSFFELTAFALSVQWGKMIATVNVG 537
Query: 712 GRDSANAMV 720
S M
Sbjct: 538 SATSRGKMA 546
>gi|123477722|ref|XP_001322027.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
gi|121904865|gb|EAY09804.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
Length = 381
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 171/341 (50%), Gaps = 16/341 (4%)
Query: 389 HKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI-YCSLITA 447
+K P VPGT F VD + + H FL+H H DH G SF ++ +C+ ITA
Sbjct: 15 YKPPPEEFSVPGTAFTVDWHAHTLPEYIHSFLSHAHTDHLAG-AGSFRSPRVMHCTPITA 73
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
++V +K ++ + I G +T L ANH PGS + FE NGK +LHTGDF
Sbjct: 74 KMVLLKYPKLNGCIETHEIGSTIEIDGTKITFLAANHTPGSAMFFFELPNGKKILHTGDF 133
Query: 508 RFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
R E+ ++ P+ L +D TY F ++ + F+IE ++ E+ N +L +I
Sbjct: 134 RAEPEVVEVA-RNYGPVDRLYMDCTYACSKLQFVSRKDCVSFIIEKVK-EAMNNNSLVVI 191
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL---DFSKEDIQWFTTNEHESHIHVM 624
G+YTIGKE L +E A +KIY A+F L+ L F+K ++ F+ + + + IH++
Sbjct: 192 GTYTIGKEELVIEAANATCQKIYAPKARFETLQGLINSGFAKPEL--FSEDPYLTRIHLL 249
Query: 625 PMWTLASFKRLKHMSNQYAGR--FSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVP 682
P+ K + YA F + A P+GW + + + + Y+VP
Sbjct: 250 PIQECG-----KEKVSLYAASMGFDSVTAIRPSGWNGRPFWRCPTFDIYNEIKVTSYDVP 304
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
YS+H S EL EFVK V P +IP+ + ++ S L
Sbjct: 305 YSDHSSPMELTEFVKAVKPAKVIPTTTKNKKEIEKIQNSFL 345
>gi|449548339|gb|EMD39306.1| hypothetical protein CERSUDRAFT_47253 [Ceriporiopsis subvermispora
B]
Length = 505
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 179/410 (43%), Gaps = 98/410 (23%)
Query: 387 RKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
R+H P + + G P VDAF+Y + + +FLTH H DHY L+ ++ G IYCS
Sbjct: 70 RRHA--PFYKVLQGMPIAVDAFRYGSIPEITAYFLTHAHSDHYTNLSSNWRSGPIYCSEG 127
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFE-PQNGKA- 500
T L+ +G+ ++ LP++ T + G+ VT +EANHCPGS + LFE PQ A
Sbjct: 128 TGNLIVHMLGVDRKWVRPLPMDVPTIVPDTGGVSVTLIEANHCPGSCLFLFEGPQTVNAG 187
Query: 501 ----------------VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQE 544
LH GDFR S + ++ + + LDTTY +P Y FP Q
Sbjct: 188 DSAYKSPFVGTKRIFRYLHCGDFRASPQHVLHPCVKGKRLDHVYLDTTYLDPKYCFPPQP 247
Query: 545 AVIQFVIEAI----------------------------------QAESFNPKTLFLIGSY 570
VI E + ES + LF++G+Y
Sbjct: 248 QVIAACAELARRIVRGESLEDGDLKGKKRETMDGWITVHEKAYKKEESAAGRVLFIVGTY 307
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+IGKER+ +AR L KI+ ++ K +L+C + E T + E +H++P+ +A
Sbjct: 308 SIGKERIVKAIARALGTKIFCDSRKEAILRC-EADPELDALLTRDPLEGAVHLVPLGVIA 366
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFS------------------------------ 660
S RLK ++ G +S V F PTGWT++
Sbjct: 367 S-DRLKDYIGRFKGHYSRAVGFRPTGWTYTPPSGTDTTNIPSIPALIKRAQSRTYTFANL 425
Query: 661 -KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
K SPG + Y VPYSEH SF EL F +I +VN
Sbjct: 426 RPTKNSSPG-------LQVYGVPYSEHSSFVELSAFALSFDWCRMIATVN 468
>gi|406865971|gb|EKD19011.1| DNA cross-link repair protein pso2/snm1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1022
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 188/425 (44%), Gaps = 99/425 (23%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
K + K + P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT ++ HG
Sbjct: 560 KSRGKPAYERTCPFYKIMPGFFICVDAFRYGAVQG-CNAYFLSHFHSDHYIGLTSTWCHG 618
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEP 495
IYCS +TA LV ++ + + L + I G+ +T + ANHCPGS + LFE
Sbjct: 619 PIYCSKVTANLVKQQLRVDPKYVVALDFEDRFEIPGTQGVAITMIPANHCPGSSLFLFEK 678
Query: 496 QNGKA-------VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNP 536
GK +LH GDFR + +L + I LDTTY NP
Sbjct: 679 VIGKGANPKTQRILHCGDFRACPAHLAHPLLMPDVVDSITGKTKQQKIDVCYLDTTYLNP 738
Query: 537 LYDFPKQEAVI----------------------------------QFVIEA-IQAE---- 557
Y FP QE VI +FV + I+AE
Sbjct: 739 KYSFPSQEEVIKACADMCVSLKKERAEETDAWEVVKRERAGAGMTKFVKNSTIKAEDDSL 798
Query: 558 ---------SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
+ L + G+Y+IGKER+ + +AR L KI+ K ++ K L+ +E
Sbjct: 799 AMSLSSKDAKARGRLLVVCGTYSIGKERICMGIARALDCKIWAPPGKMKICKALE-DEEL 857
Query: 609 IQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK--- 665
+ TT+ E+ IH M M + L+ N Y FS IV F P+GW + +
Sbjct: 858 MSRMTTDPKEAQIH-MQMLMEIRPETLQDYLNTYKPHFSRIVGFRPSGWNYRPPVSRFIA 916
Query: 666 SP-------GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHI 704
SP W Q+G+ + VPYSEH SF EL FV + E +
Sbjct: 917 SPSISTILHSPSWHSSFSMSELVPQRGSTREASCFGVPYSEHSSFRELTMFVCALRIEKV 976
Query: 705 IPSVN 709
+P+VN
Sbjct: 977 VPTVN 981
>gi|347838544|emb|CCD53116.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1001
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 187/429 (43%), Gaps = 122/429 (28%)
Query: 389 HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT ++ HG IYCS +T
Sbjct: 547 QRTCPFYKIMPGLFICVDAFRYGAVKG-CNAYFLSHFHSDHYIGLTSTWSHGPIYCSKVT 605
Query: 447 ARLV--NMKIGIPW-------DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN 497
LV +K+ W D+L+V P Q G+ V + ANHCPGS + LFE
Sbjct: 606 GNLVKQQLKVDPKWVVSIEFDDKLEV-PNTQ-----GVSVIMIPANHCPGSSLFLFEKTT 659
Query: 498 G-------KAVLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLY 538
G + +LH GDFR + +L + I LDTTY NP Y
Sbjct: 660 GGGQRPKVQRILHCGDFRACPAHIAHPLLMPNVVDSVNGKTKQQKIDVCYLDTTYLNPKY 719
Query: 539 DFPKQEAVIQ----------------------------------FVIEAIQAESFNPKT- 563
FP Q+ V++ F+ +++ E+ + +T
Sbjct: 720 SFPSQDDVVKACADMCVSLSKEKAEESDAWETVKRERAGSKMTNFIKPSLKIEAEDSETP 779
Query: 564 --------------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
L + G+Y+IGKER+ L +AR L KIY K R+ L+ E
Sbjct: 780 DTSSKSKEKARGRLLVVCGTYSIGKERIVLGIARALDCKIYATPGKMRICAALE-DPELT 838
Query: 610 QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR 669
T++ E+ IH+ + L + L+ Y F+ +V F P+GW++ K P
Sbjct: 839 SRLTSDPREAQIHMQMLMDLRP-ETLQDYLTGYKPHFTRVVGFRPSGWSY-----KPPNS 892
Query: 670 RW--------------------------QQGTIIR---YEVPYSEHCSFTELKEFVKFVS 700
R+ Q+G+ + VPYSEH SF EL FV +
Sbjct: 893 RFVDSPPIHTILTAGNWRSEYNMGELVPQRGSTKEAQCFGVPYSEHSSFRELTMFVMGLR 952
Query: 701 PEHIIPSVN 709
E +IP+VN
Sbjct: 953 IEKVIPTVN 961
>gi|320582723|gb|EFW96940.1| DNA repair protein Pso2/Snm1, putative [Ogataea parapolymorpha
DL-1]
Length = 452
Score = 165 bits (417), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 122/358 (34%), Positives = 173/358 (48%), Gaps = 45/358 (12%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGK-IYCSLITARLVNMKIGIPWDRLQ 462
VDAF Y S + LTHFH DHY GLT+++ HG I + IT L+ K G+ D L
Sbjct: 84 VDAFCYAPHPAISVYLLTHFHSDHYGGLTKNWDHGSVIIVTPITRNLLVYKFGVNPDLLL 143
Query: 463 VLPLNQKTTIAGID--VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ 520
+ NQ + D +TCL+ANHCPGS I + E G LH GD R ++ M S++Q
Sbjct: 144 SVDYNQTIEVPHTDLKITCLDANHCPGSGIFVIE-SPGLRYLHCGDCRINKPMLE-SLMQ 201
Query: 521 TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE----SFN-------------PKT 563
H + LDTTY NPLY+FPKQE VI + + +Q++ F+ K
Sbjct: 202 IGRFHKIYLDTTYLNPLYNFPKQEIVIDELCKLLQSKMETMQFSQQRVIDFFVDRKPQKF 261
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L +IG+Y IGKERL +++A L+ KIY N K VL + D T N IH+
Sbjct: 262 LIVIGTYLIGKERLAIKLAEALQTKIYCNEEKKNVLSQFGWPNLDNLLDTHNPESCQIHL 321
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK----------KKSPGR---- 669
+ L L Y+ F + PTGW+ GK +SP
Sbjct: 322 AALPKLNK-DYLAEQLKTYSRHFKAAIGIRPTGWSVRYGKPVPSLDAMVAAESPEMVYAA 380
Query: 670 ------RWQQGTIIR-YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV 720
R+++ R ++PYSEH S+ EL F + + ++ +V+ +D AM+
Sbjct: 381 ISKHFDRFREDNKARVLQIPYSEHSSYRELFYFANLLEYDELVATVSPHNQDEQLAML 438
>gi|403420266|emb|CCM06966.1| predicted protein [Fibroporia radiculosa]
Length = 810
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 203/454 (44%), Gaps = 78/454 (17%)
Query: 339 NKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCV 398
+ +I+ + T V V ++ ++ + K S ++ + + GR+ P + +
Sbjct: 334 DPVISPPYTAKKTQVFSVLMSSHKENEAWKEASAAEDRSFRPTKGNGGRRKA--PFYKIM 391
Query: 399 PGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
G P VDAF+Y + G S +FLTH H DHY L+ ++ G IYCS TA L+ +G+
Sbjct: 392 QGMPIAVDAFRYGTIPG-ISAYFLTHAHSDHYTNLSANWRSGPIYCSEGTANLIIHMLGV 450
Query: 457 PWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFE-PQNGKA------------ 500
+ LP++ T I G+ VT +EANHCPGS + LFE PQ A
Sbjct: 451 DPQWVHALPMDVATIIPQTGGVQVTLIEANHCPGSCLFLFEGPQTVNAGDSAFKSSFVGS 510
Query: 501 -----VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP------------------- 536
LH GDFR S + ++ + + LDTTY +P
Sbjct: 511 SKTFRYLHCGDFRASPRHVNHPSVKGKLLDHVYLDTTYLDPKASCFITACAELARRLVVG 570
Query: 537 -----LYDFPKQEAVIQFVIEAIQAESFN----PKTLFLIGSYTIGKERLFLEVARVLRK 587
+ D K + + + + + E N + L ++G+Y+IGKER+ +A L+
Sbjct: 571 QSLHDVGDNSKGKRTMDSWLTSPEKEGANYSKPGRVLVVVGTYSIGKERIVKAIAHALQT 630
Query: 588 KIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
KIY ++ K +L+C + D T + E +H++P+ +AS RLK +Y G +
Sbjct: 631 KIYCDSRKAALLRCQADPELD-ALLTKDPMEGGVHLVPLSVIAS-DRLKDYVERYKGHYH 688
Query: 648 LIVAFSPTGWTFS--KGKKKSPG-----RRWQQ---------------GTIIRYEVPYSE 685
V F PTGWTFS G SP R Q + Y VPYSE
Sbjct: 689 KAVGFRPTGWTFSAPAGTDVSPAVATVISRSQSRNFTHTHLNPMKNSTAALQIYGVPYSE 748
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
H SF EL F V+ +I +VN +S M
Sbjct: 749 HSSFFELTCFALSVNWGKMIATVNVGSENSRKKM 782
>gi|169624035|ref|XP_001805424.1| hypothetical protein SNOG_15267 [Phaeosphaeria nodorum SN15]
gi|160705099|gb|EAT77492.2| hypothetical protein SNOG_15267 [Phaeosphaeria nodorum SN15]
Length = 936
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 138/468 (29%), Positives = 209/468 (44%), Gaps = 101/468 (21%)
Query: 335 KPAANKLITDFFLGSITNVKKVSTPTNG----QSGSRKSFSGSDRKKHAAKDQSKGRKHK 390
+PA + F LG+ + STPT+ +G + + + + K +
Sbjct: 443 RPAKSGQSNPFQLGAAS-----STPTSAFSKLMAGHAEDAAWASAAAENNAARGKPAYQR 497
Query: 391 DIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
P + +PG VDAF+Y ++G + +FL+HFH DHY GLT ++ HG IYCS +TA
Sbjct: 498 TCPFYKIMPGFFIAVDAFRYGAVKGQKA-YFLSHFHSDHYIGLTSTWSHGPIYCSKVTAN 556
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQ--NGKA--- 500
LV ++ + + L +T + G+ VT + ANHCPGS + LFE + NGK
Sbjct: 557 LVRQQLRVDPSWVVDLDFEARTEVPGTQGVFVTMISANHCPGSSLFLFEKETSNGKPSKL 616
Query: 501 --VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQEAV 546
VLH GDFR + +L+ + + LDTTY NP Y FP Q V
Sbjct: 617 QRVLHCGDFRACQAHIEHPLLRPDVLDVVSGRNKQQKLDVCYLDTTYLNPKYAFPPQLQV 676
Query: 547 IQFVIE---------AIQAESF-----------------------NP---------KTLF 565
IQ + A A+ + NP + L
Sbjct: 677 IQACADMCVSLNKGRADDADGWEQMKRERAGQGMVKFVRKDSNADNPEQPKSPERGRLLV 736
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
++G+Y+IGKER+ + +A+ L KI+ A K R+ L+ E T + + +H+ P
Sbjct: 737 VVGTYSIGKERICVGIAKALGSKIFAPANKQRICAALE-DPELNALLTKDPRAAQVHMTP 795
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SPG-------RRW---- 671
++ + + +M N YA FS V F P+GW + + SP + W
Sbjct: 796 LFEIRADTLDDYMRN-YADTFSRCVGFRPSGWNYRPPNSRFTESPAVQTVLHSQNWKSAF 854
Query: 672 -------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q+G+ R + VPYSEH SF EL F + + IIP+VN
Sbjct: 855 SMKDLTPQRGSTSRASCFGVPYSEHSSFRELTMFCCALRIDRIIPTVN 902
>gi|45188123|ref|NP_984346.1| ADR250Cp [Ashbya gossypii ATCC 10895]
gi|44982940|gb|AAS52170.1| ADR250Cp [Ashbya gossypii ATCC 10895]
gi|374107561|gb|AEY96469.1| FADR250Cp [Ashbya gossypii FDAG1]
Length = 473
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 196/418 (46%), Gaps = 93/418 (22%)
Query: 371 SGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRG-DCSHWFLTHFHMDHYQ 429
SG+ RK+ K + +D T VD F Y+ +FL+HFH DHYQ
Sbjct: 44 SGAARKRSIPLPDVKKVRFRD---------TTLVVDGFMYMDDPTVDAYFLSHFHADHYQ 94
Query: 430 GLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC--LEANHCPG 487
GL S+ G +YCS ITARL K IP + + VL I+ I + C L+ANHCPG
Sbjct: 95 GLCPSWKQGPLYCSAITARLAMHKFKIPQELITVLYPGVPHKISPI-LRCIPLDANHCPG 153
Query: 488 SIIILFEPQNGK-----AVLHTGDFRFSEEMAS-MSVLQ-TCPIHTLILDTTYCNPLYDF 540
S+I+LFE + + ++LHTGDFR + MA+ +S L + PI T+ LDTTY +P Y F
Sbjct: 154 SLILLFEEFDDQGHVRQSILHTGDFRATPSMATELSQLTGSRPIDTVYLDTTYLHPYYHF 213
Query: 541 PKQEAVIQ-----------------FVIEAIQAESFNPK-----------TLFLIGSYTI 572
P QE+VI F + +F + L+LIGSY+I
Sbjct: 214 PLQESVIATTADFAAKLSDVGLRAYFADKQKSILTFTKRRESHKHIIKFRYLYLIGSYSI 273
Query: 573 GKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF-----TTNEHESHIHVMPMW 627
GKERL + ++ LR K+YV + + K +D KE WF T ES +H++P
Sbjct: 274 GKERLAVAISERLRTKLYVRSDTVK-RKLIDRYKE---WFPDGLITHVASESCVHLVPFE 329
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS-----------KGKKKSPGRRWQQGTI 676
++S + + + ++AFSPTGW ++ + + P +R++ T
Sbjct: 330 VISSKDSISNYMKVLPPIYEDVIAFSPTGWAYANRLRYIPEQAIRERFACPDKRYKFVTD 389
Query: 677 I----------------------RYE---VPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ RY+ +PYSEH SF +L F + I +VN
Sbjct: 390 LLHDATVDSFTTDSLKTQYNQSKRYQLFRIPYSEHSSFKDLSIFATTIQMNAIRSTVN 447
>gi|389745539|gb|EIM86720.1| DRMBL-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 515
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 129/426 (30%), Positives = 191/426 (44%), Gaps = 96/426 (22%)
Query: 374 DRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGL 431
DR K+ RK P + + G P VDAF+Y + G + +FLTH H DHY L
Sbjct: 52 DRTFRPTKNNGGRRK---APFYKVMTGMPIAVDAFRYGAIPG-VTAYFLTHAHSDHYTNL 107
Query: 432 TRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGS 488
+ ++ G IYCS TA L+ + + + LP+++ T I G+ VT +EANHCPGS
Sbjct: 108 SSNWKAGPIYCSEGTANLIIHMLSVDRKWVHPLPMDKPTVIPNTGGVTVTLIEANHCPGS 167
Query: 489 IIILFE--------------PQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHTLILD 530
+ LFE P G + LH GDFR S + ++ + + LD
Sbjct: 168 SLFLFEGKQTIDAGDSTFKSPFVGSSKMFRYLHCGDFRASPQHVLHPAVKGKHLDIIYLD 227
Query: 531 TTYCNPLYDFPKQEAVIQFVIE-------------------------------------- 552
TTY NP Y FP Q VI E
Sbjct: 228 TTYLNPKYCFPSQPQVIDACAELAKRIVCGSGLDGGRAGGSTSVGKTVDKWFVAGPSIKV 287
Query: 553 ----AIQAESFNPKTLFLIGSYTIGKERL--FLEVARVLRKKIYVNAAKFRVLKCLDFSK 606
+A++ K L ++G+Y+IGKER+ F +AR L+ K+Y ++ K +L+C
Sbjct: 288 EDKGKTKAKATTDKILIVVGTYSIGKERVLPFSAIARALQTKVYCDSRKAAILRCQS-DP 346
Query: 607 EDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKG---- 662
E T + +E+ +H++P+ + S RLK + ++ G ++ VAF PTGWT++
Sbjct: 347 ELHAMLTKDPYEASVHLVPLGVVTS-DRLKEYTERWKGHWAKAVAFRPTGWTYTPPVGSD 405
Query: 663 ---------KKKSPGRRWQQGTI--IR--------YEVPYSEHCSFTELKEFVKFVSPEH 703
K +P + + + +R Y VPYSEH SF EL F V
Sbjct: 406 TLPSISSIITKGNPHQSFTHANLKPMRNSTFTHELYGVPYSEHSSFYELTCFTLSVDWGR 465
Query: 704 IIPSVN 709
II +VN
Sbjct: 466 IIATVN 471
>gi|392589814|gb|EIW79144.1| DRMBL-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 468
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 185/412 (44%), Gaps = 85/412 (20%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
+ P + + G P VDAF+Y + + +FLTH H DHY L+ S+ G IYCS TA
Sbjct: 36 RKAPFYKVLQGMPIAVDAFRYGTIPNVTAYFLTHAHSDHYTNLSSSWKSGPIYCSEGTAN 95
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFE--------- 494
L+ + + DR V PL T + G+ VT +EANHCPGS + LFE
Sbjct: 96 LIIHMLSV--DRKWVHPLPMDTPVEVPDTGGVTVTLIEANHCPGSCLFLFEGRQTVNAGD 153
Query: 495 ---------PQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEA 545
Q LH GDFR S ++ P+ T+ LDTTY +P Y FP Q
Sbjct: 154 SAFRSHFVGTQRVFRYLHCGDFRASPRHVMHPAVKGKPLDTVYLDTTYLDPKYTFPPQAM 213
Query: 546 VIQFVIEAIQ-----------------AESF-----------------NPKTLFLIGSYT 571
VI E + SF +TL ++G+Y+
Sbjct: 214 VIDSCAELAKKIVHGEGASNRHGANRTMNSFFTSSTSEVKREAEETPTGQRTLVVVGTYS 273
Query: 572 IGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLAS 631
IGKER+ +A L K+Y +A K +L+C + + D T + + +H++P+ + S
Sbjct: 274 IGKERIVKAIANALNTKVYCDARKAAILRCQNDPELD-ALLTKDPVQGGVHLLPLGMIVS 332
Query: 632 FKRLKHMSNQYAGRFSLIVAFSPTGWTFS--KGKKKSPG------------------RRW 671
+LK ++ +S ++ F PTGWT++ G SP R
Sbjct: 333 -DKLKPYLQRFKSTYSRVLGFRPTGWTYTPPSGSDMSPSIPAIISRGQAKVFNCADLRPM 391
Query: 672 QQGT--IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVS 721
Q+ + + Y VPYSEH SF EL F +I +VN G++++ A +S
Sbjct: 392 QKSSFELQMYGVPYSEHSSFFELTCFALSCDWRKMIATVNV-GKETSRAKMS 442
>gi|167515482|ref|XP_001742082.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778706|gb|EDQ92320.1| predicted protein [Monosiga brevicollis MX1]
Length = 194
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 5/191 (2%)
Query: 401 TPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
T F VDAF Y C+ +FL+HFH DHY GLT F G +YCS ITARLV +IG+ +
Sbjct: 1 TSFVVDAFTYGAVPQCTAYFLSHFHYDHYGGLTARFDWGPLYCSAITARLVQSQIGVKPE 60
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
++++ I G VT LEA+HCPG+++++F NG+ VLHTGDFR +E++ + L
Sbjct: 61 HIRIINPGNTYQIEGHRVTVLEADHCPGAVLLIFNV-NGRNVLHTGDFRATEQV--LQSL 117
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
Q+ IHT+ LDTTYCN Y FP+ E ++ + + + P+TLFL G+YTIGKER+F
Sbjct: 118 QSFSIHTVHLDTTYCNEKYCFPRIETILSRLQDICEKHRL-PRTLFLCGTYTIGKERVFR 176
Query: 580 EVARVLRKKIY 590
+ L K +
Sbjct: 177 AIVERLGAKFW 187
>gi|320039680|gb|EFW21614.1| DNA cross-link repair protein pso2/snm1 [Coccidioides posadasii
str. Silveira]
Length = 840
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 125/425 (29%), Positives = 186/425 (43%), Gaps = 96/425 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GL ++ HG
Sbjct: 397 SRGKQAYERTCPFYKILPGFSICVDAFRYGAVEG-CNAYFLSHFHSDHYIGLNSNWSHGP 455
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + L + + G+ VT + ANHCPGS + LFE
Sbjct: 456 IYCSKVTGNLVRQQLKVNPKFIVDLEFEKPFEVPETGGVRVTMIPANHCPGSSLFLFEKV 515
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPL 537
G+ VLH GDFR S +++ + + LDTTY NP
Sbjct: 516 FGQGKARRYQRVLHCGDFRASPAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPK 575
Query: 538 YDFPKQEAVIQFVIEA-------------------IQAESFN----------------PK 562
Y FP QE V+ E N P+
Sbjct: 576 YAFPSQEDVVNACARMCMSLNENKPGHHDIWKRGKANGEDLNEKDNSGNNAKAGGNPKPR 635
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L +IG+Y+IGKER+ L +A+ L KI+ AAK R+ CL+ E T++ E+ +H
Sbjct: 636 LLVVIGTYSIGKERICLGIAKALNCKIFATAAKQRICACLE-DPELSSLLTSDPLEAQVH 694
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ---GTIIRY 679
+ + + +++S+ + F+ IV F PTGW + + GR T++R
Sbjct: 695 MHSLMEIRVDTLSEYLSS-FKPHFTHIVGFRPTGWNY----RPPAGRMIDNPLVSTVLRS 749
Query: 680 E-------------------------VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
E VPYSEH SF EL F + +IP+VN R
Sbjct: 750 ESWKARFTVNDLVPQRGSNKQSSCFGVPYSEHSSFRELTMFCCALRLGKVIPTVNVGSRK 809
Query: 715 SANAM 719
+ M
Sbjct: 810 TREKM 814
>gi|303311571|ref|XP_003065797.1| DNA repair metallo-beta-lactamase family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240105459|gb|EER23652.1| DNA repair metallo-beta-lactamase family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 840
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 187/425 (44%), Gaps = 96/425 (22%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GL ++ HG
Sbjct: 397 SRGKQAYERTCPFYKILPGFSICVDAFRYGAVEG-CNAYFLSHFHSDHYIGLNSNWSHGP 455
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + L + + G+ VT + ANHCPGS + LFE
Sbjct: 456 IYCSKVTGNLVRQQLKVNPKFIVDLEFEKPFEVPETGGVRVTMIPANHCPGSSLFLFEKV 515
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPL 537
G+ VLH GDFR S +++ + + LDTTY NP
Sbjct: 516 FGQGKARRYQRVLHCGDFRASPAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPK 575
Query: 538 YDFPKQEAVIQFVIEAIQAESFN-----------------------------------PK 562
Y FP QE V+ + + N P+
Sbjct: 576 YAFPSQEDVVNACARMCMSLNENKPGHHDIWKRGKANGEDLDEKDNSGNNAKAGGNPKPR 635
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L +IG+Y+IGKER+ L +A+ L KI+ AAK R+ CL+ E T++ E+ +H
Sbjct: 636 LLVVIGTYSIGKERICLGIAKALNCKIFATAAKQRICACLE-DPELSSLLTSDPLEAQVH 694
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ---GTIIRY 679
+ + + +++S+ + F+ IV F PTGW + + GR T++R
Sbjct: 695 MHSLMEIRVDTLSEYLSS-FKPHFTHIVGFRPTGWNY----RPPAGRMIDNPLVSTVLRS 749
Query: 680 E-------------------------VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
E VPYSEH SF EL F + +IP+VN R
Sbjct: 750 ESWKARFTVNDLVPQRGSNKQSSCFGVPYSEHSSFRELTMFCCALRLGKVIPTVNVGSRK 809
Query: 715 SANAM 719
+ M
Sbjct: 810 TREKM 814
>gi|156063186|ref|XP_001597515.1| hypothetical protein SS1G_01709 [Sclerotinia sclerotiorum 1980]
gi|154697045|gb|EDN96783.1| hypothetical protein SS1G_01709 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1001
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 184/418 (44%), Gaps = 109/418 (26%)
Query: 393 PTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV- 450
P + +PG VDAF+Y C+ +FL+HFH DHY GLT S+ +G IYCS +T LV
Sbjct: 552 PFYKIMPGLFICVDAFRYGAVTGCNAYFLSHFHSDHYIGLTSSWSYGPIYCSKVTGNLVK 611
Query: 451 -NMKIGIPW-------DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEP-----QN 497
+K+ W D+++V P Q G+ VT + ANHCPGS + LFE QN
Sbjct: 612 QQLKVDPKWVVSIEFEDKIEV-PNTQ-----GVSVTMIPANHCPGSSLFLFEKTTTRGQN 665
Query: 498 GKA--VLHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQ 543
K +LH GDFR + +L + TL LDTTY NP Y FP Q
Sbjct: 666 PKVQRILHCGDFRACPAHIAHPLLMPNVVDTLSGKTKQQKIDVCYLDTTYLNPKYSFPSQ 725
Query: 544 EAVIQF---------------------------------VIEAIQAESFNPKT------- 563
+ V++ I+++ E+ + T
Sbjct: 726 DDVVKACADMCVSLSKENAEESDAWETVKRERAGVKMTEFIKSVPTETGDSNTLETSSEN 785
Query: 564 --------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
L + G+Y+IGKER+ L +AR L KIY K R+ L+ E T++
Sbjct: 786 KKKARGRLLVVCGTYSIGKERIVLGIARALDCKIYAVPGKMRICAALE-DPELTSRLTSD 844
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP----- 667
E+ IH+ + L + L+ Y F+ +V F P+GW++ + SP
Sbjct: 845 PREAQIHMQMLMELRP-ETLQDYLTGYKPHFTRVVGFRPSGWSYKPPNSRFVDSPPIHTI 903
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q+G+ + VPYSEH SF EL FV + E ++P+VN
Sbjct: 904 LNASNWRSEYDMGELIPQRGSTKEAQCFGVPYSEHSSFRELTMFVMGLRIEKVVPTVN 961
>gi|440640679|gb|ELR10598.1| hypothetical protein GMDG_04870 [Geomyces destructans 20631-21]
Length = 874
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 133/410 (32%), Positives = 183/410 (44%), Gaps = 100/410 (24%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT S+ HG IYCS +T LV
Sbjct: 434 PFYKIMPGFYICVDAFRYGAVQG-CNAYFLSHFHSDHYIGLTASWCHGPIYCSKVTGNLV 492
Query: 451 NMKIGIPWDRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKA----- 500
++ + D V+ LN + + G+ VT + ANHCPGS + LFE K
Sbjct: 493 KQQLRV--DPKWVITLNFEDKVEVPNTHGVSVTMIPANHCPGSSLFLFEKVVRKGPNPKV 550
Query: 501 --VLHTGDFRFSEEMASMSVLQTCP--------------IHTLILDTTYCNPLYDFPKQE 544
+LH GDFR A + Q P I LDTTY NP Y FP Q+
Sbjct: 551 QRILHCGDFRACP--AHVEHPQLMPDIVDAITGKTRQQKIDVCYLDTTYLNPRYSFPSQD 608
Query: 545 AVIQ--------------------------------FVIEAIQ----AESFNPKT----- 563
V+Q FV ++ A +PK
Sbjct: 609 EVVQSCADVCVSMSKDKGDNAWERAGKDRTGASMGRFVDAEVKSKDSATKADPKKPRGRL 668
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L L G+Y+IGKE + L +AR L KI+ +K + L+ E TTN HE+ IH+
Sbjct: 669 LILCGTYSIGKENICLGIARALDCKIWAPPSKQKTCAALE-DPELSSRMTTNPHEAQIHM 727
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------GRRW-- 671
+ + + + L+ N FS IV F P+GW + + SP G W
Sbjct: 728 QSLMEIRA-ETLQDYLNGLKPHFSRIVGFRPSGWNYRPPNSRLVDSPSVAAVLTGENWRS 786
Query: 672 ---------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q+G+ + VPYSEH SF EL F + E I+P+VN
Sbjct: 787 RYTMADLNPQRGSTHEAACFGVPYSEHSSFRELTMFCCALRIEKIVPTVN 836
>gi|392578335|gb|EIW71463.1| hypothetical protein TREMEDRAFT_28150, partial [Tremella
mesenterica DSM 1558]
Length = 482
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/434 (29%), Positives = 187/434 (43%), Gaps = 80/434 (18%)
Query: 363 QSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLT 421
SG ++ D + +D + + P + + G P VDAF+Y + + LT
Sbjct: 7 MSGHKEREQWKDAEADLKRDGKRFAGRRPAPFYKVMTGMPVAVDAFRYGAIPKVTAYLLT 66
Query: 422 HFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLN---QKTTIAGIDVT 478
H H DHY L+RS++HG IYCS TA L+ +G+ + LP + + G+ VT
Sbjct: 67 HAHSDHYTNLSRSWNHGPIYCSETTANLIIHMLGVEPKWVHGLPNDIPFEMPNTGGVTVT 126
Query: 479 CLEANHCPGSIIILFE--------------PQNGKA----VLHTGDFRFSEEMASMSVLQ 520
+EANHCPGS I LFE P G LH GDFR +M +
Sbjct: 127 PMEANHCPGSSIFLFEGRQTVNAGDSGFTSPYVGSKRVFRYLHCGDFRACPKMVLHPAIA 186
Query: 521 TCPIHTLILDTTYCNPLYDFPKQEAVIQFV------------------------------ 550
I T LDTTY NP Y FP Q VI+
Sbjct: 187 KAKIDTCYLDTTYLNPKYCFPPQPLVIEACATLARKTVRAALQEEKSKAMMQSWLVKREE 246
Query: 551 ---IEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
+E ++ E +TL ++G+Y+IGKER+ VA+ LR IY + K +L C E
Sbjct: 247 PEGLEEVKEEKTKGRTLVVMGTYSIGKERIVKAVAKALRTTIYCDPRKKAILLC-QTDPE 305
Query: 608 DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS--KGKKK 665
+T+ S +H++P+ + RL+ + F ++ F PTGW++S G
Sbjct: 306 LHSLLSTDPVSSMVHLLPLGNI-QLDRLQEYLTRLHPHFDRVLGFRPTGWSYSPPAGTDL 364
Query: 666 SP-----------------GRRWQQGT---IIRYEVPYSEHCSFTELKEF-VKFVSPEHI 704
P G + +G+ + Y VPYSEH SF EL F + PE
Sbjct: 365 LPDVNTVIRRDQSRGFTDAGLKPMRGSCRQYMMYGVPYSEHSSFFELTCFALSLPGPELK 424
Query: 705 IPSVNNDGRDSANA 718
+ + N G + + A
Sbjct: 425 MIATVNVGNEKSRA 438
>gi|119194063|ref|XP_001247635.1| hypothetical protein CIMG_01406 [Coccidioides immitis RS]
gi|392863120|gb|EAS36170.2| DNA repair protein Pso2/Snm1 [Coccidioides immitis RS]
Length = 840
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 124/426 (29%), Positives = 187/426 (43%), Gaps = 98/426 (23%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+G++ + P + +PG VDAF+Y + G C+ +FL+HFH DHY GL ++ HG
Sbjct: 397 SRGKQAYERTCPFYKILPGFSICVDAFRYGAVEG-CNAYFLSHFHSDHYIGLNSNWSHGP 455
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQ 496
IYCS +T LV ++ + + L + + G+ VT + ANHCPGS + LFE
Sbjct: 456 IYCSKVTGNLVRQQLKVNPKFIVDLEFEKPFEVPETGGVRVTMIPANHCPGSSLFLFERV 515
Query: 497 NGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPL 537
G+ VLH GDFR S +++ + + LDTTY NP
Sbjct: 516 FGQGKARRFQRVLHCGDFRASPAHIQHPLIRPDAVDPVTGQPKQQRIDVCYLDTTYLNPK 575
Query: 538 YDFPKQEAVIQFVIE-----------------------------------AIQAESFNPK 562
Y FP QE V+ A + + P+
Sbjct: 576 YAFPSQEDVVNACARMCVSLNENKPGHHDIWKRGKANGEDLDEKDNSGNNAKASGNPKPR 635
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
L +IG+Y+IGKER+ L +A+ L KI+ AAK R+ CL+ E T++ E+ +H
Sbjct: 636 LLVVIGTYSIGKERICLGIAKALNCKIFATAAKQRICACLE-DPELSSLLTSDPLEAQVH 694
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW----QQGTIIR 678
+ + + +++S+ + F+ IV F PTGW + + P R T++R
Sbjct: 695 MHSLMEIRVDTLSEYLSS-FKPHFTHIVGFRPTGWNY-----RPPAGRMIDNPSVSTVLR 748
Query: 679 YE-------------------------VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
E VPYSEH SF EL F + +IP+VN R
Sbjct: 749 SESWKARFTVNDLVPQRGSNKQSSCFGVPYSEHSSFRELTMFCCALRLGKVIPTVNVGSR 808
Query: 714 DSANAM 719
+ M
Sbjct: 809 KTREKM 814
>gi|219121698|ref|XP_002181198.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407184|gb|EEC47121.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 503
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/366 (32%), Positives = 183/366 (50%), Gaps = 56/366 (15%)
Query: 398 VPGTP-FRVDAFK--YL---RGDCSHWFLTHFHMDHYQGLTRSFHH---GKIYCSLITAR 448
+P P VDAF+ YL R + + L+H+H DHY L R + I+C+ TA
Sbjct: 10 IPDCPRLFVDAFRGAYLQKTRNPDNVFILSHWHGDHYGSLPRDGKYQGPSLIHCTPTTAA 69
Query: 449 LVNMKIGIP---------WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGK 499
L+ +P + PL ++ + +T +ANHCPG+ II+ E +GK
Sbjct: 70 LLREIHQVPEKYVVEHGYGETWLFHPLGNTKGLSTVQITFYDANHCPGAAIIVVEMADGK 129
Query: 500 AVLHTGDFRFSEEMASMSVLQTC----PIHTLILDTTYCNPLYDFPKQEAVIQFVI---E 552
LHTGD R+ M +L+ I T++LDTTY +P ++F QEA I + E
Sbjct: 130 VHLHTGDMRYHTMMNVYPILERAASSRAIDTVLLDTTYSDPKHNFQPQEAAIDAIAAYSE 189
Query: 553 AIQAESFN--PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL----DFSK 606
+ S L L+ Y+IGKE++ EV+ + +YVN K R+++C+ + S
Sbjct: 190 GLLGTSRKCCSNVLILLSCYSIGKEKVLWEVSSRTNQLVYVNDRKMRMMRCIQKHHESSS 249
Query: 607 EDIQWFTTNEHESHIHVMPM--------------WTLASFKRLKHMSNQYAGRFSLIVAF 652
+ +Q TT+ + + IHV+PM W A + K + +Y + +VAF
Sbjct: 250 QIVQRCTTDPNATDIHVIPMGLAGELWPYFQPNYWACAEYA--KALETEY----TKVVAF 303
Query: 653 SPTGWT-FSKGKKKSPGRRWQQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
PTGW SK KK+ ++ I IR + YSEH SF+ELK FV+F+ P ++P+V
Sbjct: 304 IPTGWADGSKWNKKNATSKFDCKGIEVEIRL-ISYSEHSSFSELKTFVEFLRPRKVVPTV 362
Query: 709 NNDGRD 714
D RD
Sbjct: 363 FKDDRD 368
>gi|363754123|ref|XP_003647277.1| hypothetical protein Ecym_6059 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890914|gb|AET40460.1| hypothetical protein Ecym_6059 [Eremothecium cymbalariae
DBVPG#7215]
Length = 585
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 186/383 (48%), Gaps = 81/383 (21%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV 463
VD F ++ + ++FL+HFH DHYQGL +S+ G+++CS ITA LV K I D++ +
Sbjct: 183 VDGFNFMDNSEVKYYFLSHFHADHYQGLCQSWKQGRLFCSQITANLVISKFKIDVDQITI 242
Query: 464 LPLNQKTTIAGIDVTC--LEANHCPGSIIILFEPQ--NGK---AVLHTGDFRFSEEMASM 516
L LN+ I + C L+ANHCPG++I+LFE NG +VLHTGDFR + M
Sbjct: 243 LKLNEPLYITP-RLRCFPLDANHCPGALILLFEELDFNGSVLHSVLHTGDFRATNGMIRS 301
Query: 517 SVLQTC--PIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF-------- 565
TC + ++ LDTTY NP Y FP Q +V++ A Q +T F
Sbjct: 302 LDQLTCGRELDSVYLDTTYLNPNYHFPLQRSVLKLTASFAAQISQTGIRTYFGDTQKSIL 361
Query: 566 --------------------LIGSYTIGKERLFLEVARVLRKKIYV--NAAKFRVLK-CL 602
LI +Y+IGKE+L + +A L+ KIY+ N+ K ++K +
Sbjct: 362 TFMKSTRDKIISQKRFRYIYLIATYSIGKEKLAISIAEELQTKIYIPLNSPKHDLIKQYM 421
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKG 662
D+ +I T N ES +H++ L+S + + + IV F+PTGW++ G
Sbjct: 422 DWIPSNI--ITHNIQESCVHLVSFDVLSSKESIDKYLLTVPPIYEDIVGFNPTGWSYDNG 479
Query: 663 KK----KSPGRRWQQGT--------IIR------------------------YEVPYSEH 686
+K ++ +R+Q +IR ++VPYSEH
Sbjct: 480 RKYMSSEATIKRFQSAESRYKYVIDLIRDCSVDELKIETFRSQYKPHKKYQVFKVPYSEH 539
Query: 687 CSFTELKEFVKFVSPEHIIPSVN 709
SF +L F+ V + +VN
Sbjct: 540 SSFKDLCVFLTKVPVSRVYSTVN 562
>gi|452821244|gb|EME28277.1| DNA ligase [Galdieria sulphuraria]
Length = 340
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 141/256 (55%), Gaps = 23/256 (8%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
IPT VP T F VD F L S +FLTH+H DHY+GL +F G IYCS ITARL+
Sbjct: 8 IPTSHQVPHTLFLVDYFLKLPTQVSAFFLTHWHYDHYRGLGSNFQQGFIYCSPITARLLE 67
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
+ + N+ + + + L+ANHCPGS++ILF+ G LHTGD RF++
Sbjct: 68 RITLVDPQWIVAKHNNEPFLVDKVQIRFLDANHCPGSVMILFQTSEGSNYLHTGDMRFTQ 127
Query: 512 EM-ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNP--------- 561
++ + VL + + LDTTYC+ Y FP Q IQ ++ IQ + P
Sbjct: 128 DLKKELIVLNNICLDAVYLDTTYCHRKYRFPSQAQTIQRIVHKIQNMNRIPFQDSNSNRI 187
Query: 562 -----KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI--QWFTT 614
TL+LI +Y+IGKER+ ++ +IYV+ K++VL+CL+F EDI ++FTT
Sbjct: 188 DCTSRHTLYLIATYSIGKERI-IDALIQNGYRIYVSPDKWKVLRCLEFWNEDIFNEYFTT 246
Query: 615 NEHESHIHVMPMWTLA 630
+ S P+W +
Sbjct: 247 DPAAS-----PIWLVG 257
>gi|406607864|emb|CCH40802.1| DNA cross-link repair 1A protein [Wickerhamomyces ciferrii]
Length = 571
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 180/375 (48%), Gaps = 62/375 (16%)
Query: 387 RKHKDIPTWCCVP---GTPFRVDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYC 442
R+ K IP + + VD F++ +FL+H+H DHY GL++ + G IY
Sbjct: 177 RQSKPIPDFKILTFNNNYKLNVDGFQFQDHPSIDKYFLSHYHSDHYIGLSKKWSQGIIYT 236
Query: 443 SLITARLVNMKIGIPWDRLQVLPLNQKTTIA-GIDVTCLEANHCPGSIIILFEPQNGKA- 500
S T+ L+ + IP +R+ L + I VT +ANHCPG I LFE N K
Sbjct: 237 SKTTSNLLQSIMKIPSERIIGLEFGIPHDLTEQIKVTLFDANHCPGGAIFLFEEYNPKGE 296
Query: 501 ----VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
+LHTGDFR S++ + + + + + LDTTY NP+Y F Q VI+ E +++
Sbjct: 297 IIKRILHTGDFRVSKQ--HLDLFKDMFLDEIYLDTTYMNPVYTFMLQSLVIKQTCEFLES 354
Query: 557 ESFNPKT--------------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
N T L LIGSY+IGKE+L++++A+ + KI + +++ L C+
Sbjct: 355 IINNTITKNSILNYFTQNQDYLILIGSYSIGKEKLYIQLAKTINSKILITKERYKFLSCI 414
Query: 603 DFSKEDIQWFTTNEHE--SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS 660
+ DI FTT+ + + I ++ + L+ K L S++ I+ PTGW+F+
Sbjct: 415 ENFNLDI--FTTDPKDPSAKIQIISIQKLSDNKFLSQFSSKK------IIKIKPTGWSFN 466
Query: 661 KGKK--------------------KSPGRRWQQGTIIRYE------VPYSEHCSFTELKE 694
K +P ++ + +++ VPYSEH SF EL
Sbjct: 467 TFKTLTASIKNKTPQEILNQVLTPTTPSTDYKTQLLKQFQNSSSLSVPYSEHSSFKELSI 526
Query: 695 FVKFVSPEHIIPSVN 709
F+ IIP+VN
Sbjct: 527 LGCFLKWGEIIPTVN 541
>gi|449020014|dbj|BAM83416.1| similar to DNA cross-link repair protein SNM1 [Cyanidioschyzon
merolae strain 10D]
Length = 694
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/343 (29%), Positives = 172/343 (50%), Gaps = 51/343 (14%)
Query: 417 HWFLTHFHMDHYQGLTRS-FHHG---KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI 472
H+FLTH+H DHY GL R+ F G ++Y S IT ++ ++ L LP+ I
Sbjct: 333 HFFLTHYHADHYGGLRRTHFRPGCDRRLYASPITVSILQVEYQFDDAVLVRLPVGDPDGI 392
Query: 473 AGID------------VTCLEANHCPGSIIILFEP-QNGKAVLHTGDFRFS--------- 510
+D V +ANHCPG++I++F+ + G+ ++H GD R++
Sbjct: 393 TIVDRPGSPGAKPVARVLACDANHCPGAVILIFQVFETGQTIIHCGDMRYNPICMNRDPV 452
Query: 511 -EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
A+ + L +DTTY +P YDFP QEAV++ ++E Q ++ +LFL G+
Sbjct: 453 LRRFAATEGDHVQRVAYLHIDTTYSDPRYDFPPQEAVLRALVETAQRDAARAPSLFLCGT 512
Query: 570 YTIGKERLFLEVARVLRKKIYVNAA---KFRV-LKCLDFSKEDIQWF----TTNEHESHI 621
Y IGKER++ +A+ L +Y++ + K RV L C+ D F T S +
Sbjct: 513 YFIGKERVWASLAKALGTNVYIDPSWKRKRRVLLDCVRSLPTDSWRFSDVLTERVEASCV 572
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS----KGKKKSPGRRWQQGTI- 676
H++ M + + L+ M + F ++ TGW + +G ++ G + ++
Sbjct: 573 HLVRMADVQPMRLLRFMRRAQSLGFRQVIGVMATGWCQASRPPRGCQRLDGSPADKCSLL 632
Query: 677 -----------IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I Y++PYSEH S++EL+ F+ ++ PE I+P+V
Sbjct: 633 ERLVLPSNHSCILYKLPYSEHSSYSELRAFIDWIQPEQIVPTV 675
>gi|281211444|gb|EFA85608.1| DNA repair metallo-beta-lactamase domain-containing protein
[Polysphondylium pallidum PN500]
Length = 423
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 114/181 (62%), Gaps = 2/181 (1%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
P++ V GT F VD F+Y D H+FL+HFH DHY G+T+++ G IYCS T +LV
Sbjct: 218 PSFKIVKGTNFLVDGFQYKSEDYKHYFLSHFHSDHYTGITKTWKFGPIYCSFETGKLVYT 277
Query: 453 KIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
K+G+ + ++ +P N I ++V L+ANHCPG+ + LF +G+ LHTGDFR++ +
Sbjct: 278 KLGVDSEYIKAMPWNTFMKIENVNVAILDANHCPGAAMFLF-CVDGEYTLHTGDFRYNSK 336
Query: 513 MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTI 572
MA +L+ + L LD T+C+P Y FP Q+ +++ V + + E+ + +TLFL G +
Sbjct: 337 MADYPLLRDIKLTRLYLDNTFCDPQYVFPPQQQIVREVADIVAREN-DGRTLFLFGEDIV 395
Query: 573 G 573
G
Sbjct: 396 G 396
>gi|429965110|gb|ELA47107.1| hypothetical protein VCUG_01380 [Vavraia culicis 'floridensis']
Length = 386
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 185/382 (48%), Gaps = 73/382 (19%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
K +P VP T F VD +K L D SH FLTHFH DHY GL +SF+ I+CS+ TA L
Sbjct: 13 KHVPFHRRVPNTTFIVDYYKLLVSDTSHTFLTHFHADHYYGLRKSFNKN-IFCSVTTANL 71
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V + I + ++ + +N+ + +DV C EANHCPG++ +F QN LHTGDFRF
Sbjct: 72 VKLNIKVDVKYIKEMAMNRVYRVDDVDVMCFEANHCPGAVGFIFCVQNF-YYLHTGDFRF 130
Query: 510 SEEMAS-----MSVLQ-----TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF 559
+ ++ +SV++ C T+ D TY N ++ F QE VI VI I A++
Sbjct: 131 NIDVHGNLHNLISVMRPNDDAKC-FDTVFYDNTYENYMH-FDSQEEVICSVIRDILAQAT 188
Query: 560 NPKTL------FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLD-FSKEDIQWF 612
+ L ++ SY+IGKE+LFL VA ++ VN K ++C +++E I
Sbjct: 189 SKSVLAPVQTKYVFPSYSIGKEKLFLCVAYYFNWEVNVNTKKNANMQCYSAYTREQINKS 248
Query: 613 TTN---------EHESHIHVMPMWTLASFKRLK-------------------------HM 638
+ H S I P++T A + +K ++
Sbjct: 249 VMDCCKRIRERLGHSSRI--FPVFTKAYVQTIKDPETEPLLCVKTNINDAIMEVIPFNYV 306
Query: 639 SNQYAG------RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTI------IRYEVPYSEH 686
+ G RF +V TGW K KKS Q GT+ +RY PYSEH
Sbjct: 307 NRVKLGILYSKTRFKKVVVICGTGW---KKAKKSFNLTRQNGTVVKNGLEVRY-YPYSEH 362
Query: 687 CSFTELKEFVKFVSPEHIIPSV 708
S EL++F + VS + I P+V
Sbjct: 363 SSNAELQKFCESVSYKTITPTV 384
>gi|226479044|emb|CAX73017.1| DNA cross-link repair 1A protein [Schistosoma japonicum]
Length = 345
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 145/262 (55%), Gaps = 23/262 (8%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
K K P + +P T VDAF Y + G C+++FL+HFH DH++G+ ++F G IYCS +
Sbjct: 54 KFKKCPFYKWIPDTSITVDAFCYNDIPG-CTYYFLSHFHSDHFKGIHKNFK-GHIYCSEV 111
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNG-KAVLHT 504
T L+ G+ + VL L ++T I ++VT L+ANHCPGS++ +F + K LHT
Sbjct: 112 TKNLLRDAYGLGL-VISVLELEKRTLIGDVEVTALDANHCPGSLMFIFHVLSSRKTYLHT 170
Query: 505 GDFRFSEEMASM-----------SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEA 553
GDFR++ EM + S IH++ LDTTYC+ YDFP Q VI +E
Sbjct: 171 GDFRYTPEMLAHPSSLTNYLSENSAKHLSRIHSVFLDTTYCSSQYDFPTQVDVIHGAVEI 230
Query: 554 IQAESF-NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC-----LDFSKE 607
+ +P L + G Y+IGKER + L K+++ + + R++K KE
Sbjct: 231 TRNYLIKDPTVLVICGMYSIGKERFVHGLTSELNLKVWLPSNQSRLVKLAAQGSCKVCKE 290
Query: 608 DIQWFTTNEHESHIHVMPMWTL 629
+Q+ N H++ +HV+PM L
Sbjct: 291 LLQYVVDNPHKAQLHVLPMQQL 312
>gi|397636771|gb|EJK72411.1| hypothetical protein THAOC_06062 [Thalassiosira oceanica]
Length = 702
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 159/314 (50%), Gaps = 40/314 (12%)
Query: 300 VESNKDAHVSNDGSSSYHGSERH---------KEASKVIVDGSSKPAANKLITDFFLGSI 350
V+S D+ D +HG+ + K +++ +KP K +TD +
Sbjct: 334 VDSEDDSDREEDMCGEWHGNAKGDTTSAGNNTKTKQTGLMNFFTKPV--KCLTDVLMTGA 391
Query: 351 TNV--KKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAF 408
+ KK + N S+KS K+ + +S + + P + + GT F D F
Sbjct: 392 KQMSKKKATLEKNKLENSKKSG-----KRRRGQWRSNNSQRGECPAFKRITGTDFICDGF 446
Query: 409 KYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLN 467
Y + S++FLTHFH DHY G+T++++HG IYCSL TA LV+ ++G+ L LP+N
Sbjct: 447 YYSSPNLSSNYFLTHFHSDHYGGITKNWNHGTIYCSLPTANLVHRQLGVEKRFLHPLPMN 506
Query: 468 QKTTIAG--------IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM-ASMSV 518
+ + VT L+ANHCPG+I+ LFE N + +LH GDFR++ E+ M
Sbjct: 507 TPFVVVSEKGGKHVPVTVTLLDANHCPGAIMFLFEVGN-RRILHVGDFRWNNELHMRMPQ 565
Query: 519 LQTCP-----IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE------SFNPKTLFLI 567
L++ + L LDTTYC Y P Q I IE E + + KTLFL
Sbjct: 566 LRSLGCGSPRLDELYLDTTYCAEKYTLPTQAEAIDAAIEVATKEVNYSKKNASNKTLFLF 625
Query: 568 GSYTIGKERLFLEV 581
G+YTIGKER++L V
Sbjct: 626 GAYTIGKERIYLLV 639
>gi|384500579|gb|EIE91070.1| hypothetical protein RO3G_15781 [Rhizopus delemar RA 99-880]
Length = 417
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 172/393 (43%), Gaps = 108/393 (27%)
Query: 377 KHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTR 433
K A ++SK K K P + V T F VDAF Y GD C +FL+HFH DHY GL
Sbjct: 69 KAKALNKSKQVKVKTCPFYKRVKDTQFVVDAFNY--GDIPGCDGYFLSHFHTDHYGGLRS 126
Query: 434 SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI--AGIDVTCLEANHCPGSIII 491
++ HG IYCS +TA L+ ++ + + LP+++ I + + V ++ANHCPGS++
Sbjct: 127 NWSHGPIYCSQVTANLIKQELKVDPRFIHPLPMDELYPIPQSNVKVALIDANHCPGSVLF 186
Query: 492 LFEPQNGKAV----LHTGDFRFSEEMASMSVLQ---TCPIHTLILDTTYCNPLYDFPKQE 544
LF + LHTGDFR + M +++ I L LDTTY NP Y FP QE
Sbjct: 187 LFVVERADKTVVRHLHTGDFRAAPRMCLHPLVRQPDNPSIQCLYLDTTYLNPQYAFPAQE 246
Query: 545 AVIQFVIEAIQAE--------------------SFN----PK----TLFLIGSYTIGKER 576
IQ V + I+ E +FN PK TL ++G+YT+GKER
Sbjct: 247 ECIQAVCDTIEKEILKDKKKNTLNGWLAQTGTNAFNMLMQPKPKKQTLIVVGTYTVGKER 306
Query: 577 LFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLK 636
+F + KE T N E+ +HV+ + + +
Sbjct: 307 VFFK------------------------DKELQSMITENPSEAQVHVVSLRDIRA----- 337
Query: 637 HMSNQYAGRFSLIVAFSPTGWTFSKGKKKS--------------PGRR-------WQQGT 675
PTGWT+ ++ P R +
Sbjct: 338 ----------------DPTGWTYKSTNTEATEMKHASLSHVITPPSDRSLNLTPFYDSRN 381
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ Y VPYSEH S+ EL F+ + + IIP++
Sbjct: 382 VKMYGVPYSEHSSYRELASFIASLDIKEIIPTM 414
>gi|410076722|ref|XP_003955943.1| hypothetical protein KAFR_0B05120 [Kazachstania africana CBS 2517]
gi|372462526|emb|CCF56808.1| hypothetical protein KAFR_0B05120 [Kazachstania africana CBS 2517]
Length = 663
Score = 156 bits (395), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 162/604 (26%), Positives = 260/604 (43%), Gaps = 118/604 (19%)
Query: 168 ESVRCPLCGIDISDLNEELRQAHTNNCLDKCENQAQDVVFPKHERGPRLEPEIDLGLGRS 227
+S+ CP+C +DIS L R+ H NCL+ N+A V KH R +D
Sbjct: 84 QSIFCPICNLDISKLELFERETHCENCLE--SNEASTNV-SKHYIEERRYTAVD------ 134
Query: 228 PQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILH 287
+ +E + S G+ +E + EE D L L++++ G+
Sbjct: 135 ---EITFPSSIESIKSDGV--HETVILNEE---DLLVTLSDDNEEGLPF----------- 175
Query: 288 TLCEIKKEYSRAVESNKDAHVSNDGSSSYHGSERHKEASKVIVD-GSSKPAANKLITDFF 346
H+++D G +E +I+D S + K I
Sbjct: 176 -------------------HLADDMEKIPTGPFLEQEDDPIIIDIASEEEEVKKTIKHTI 216
Query: 347 LGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVD 406
G+ T ++K T + +K S K + + K + + G VD
Sbjct: 217 KGNHTKIRKTFT----EKLVKKRSSHFTVNKSSKRSTRKQAPLPSVKILSFINGFKVVVD 272
Query: 407 AFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHG-KIYCSLITARLVNMKIGIPWDRLQVL 464
F Y + +FL+HFH DHY GL +S+ KIYCS IT++L+ K I DR+ +
Sbjct: 273 GFNYEANSQINDYFLSHFHSDHYIGLKKSWDKADKIYCSPITSKLLQFKFKISADRIVSI 332
Query: 465 PLNQKTTI-AGIDVTCLEANHCPGSIIILFEP-------QNGKAVLHTGDFRFSEEMAS- 515
P +K I + I VT +ANHCPG+ + LF+ + K +LHTGDFR + + +
Sbjct: 333 PNREKHWITSNISVTPFDANHCPGAQVFLFQEWATKDSLKPMKQILHTGDFRSNSHLINE 392
Query: 516 ----MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI----QFVIEAIQAESFN------- 560
+ V + I + LDTTY + +FP Q ++ +VI+ +Q +
Sbjct: 393 IHDFLKVSRNLTIDEVYLDTTYLSQNNNFPSQSEIVTKTTSYVIDFLQKRNKRHNILLGK 452
Query: 561 -PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
K + L+GSY+IGKE+L + ++R L+ K+ V ++ R + D K+ + ++ E+
Sbjct: 453 PKKKIILVGSYSIGKEKLAISISRNLKCKMVVYNSELRSVYINDLLKDMKE---NSDSET 509
Query: 620 HIHVMPMWTLAS----FKRLKHMSNQYAGRFSLIVAFSPTGWTFSKG------------- 662
+H++P+ + K LK + LI PTGWT +
Sbjct: 510 EVHLVPIRMIKDEDSILKYLKDIIQLKWIEVELI-GLIPTGWTMANSWWGMKYHKLPLEN 568
Query: 663 --------KKKSPGRRWQQGTIIRYE------VPYSEHCSFTELKEFV---KFVSPEHII 705
++ S W + + Y+ VPYSEH SFTEL F KF + II
Sbjct: 569 KFKISSNIEELSLDDDWYKKQVDTYKKFQIFNVPYSEHSSFTELVNFGTTDKFKWGK-II 627
Query: 706 PSVN 709
P+VN
Sbjct: 628 PTVN 631
>gi|344304626|gb|EGW34858.1| hypothetical protein SPAPADRAFT_69243 [Spathaspora passalidarum
NRRL Y-27907]
Length = 638
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 126/441 (28%), Positives = 188/441 (42%), Gaps = 122/441 (27%)
Query: 405 VDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHHGK-----------------IYCSLIT 446
VDAF Y D S +FL+HFH DHY G+++ + + + IYCS+IT
Sbjct: 158 VDAFCYAPHDTISQYFLSHFHSDHYGGISKKWAYERVFKDDTDFENESKYRRIIYCSVIT 217
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIA------------------GIDVTCLEANHCPGS 488
+L+ + I ++ L + + I G+ VT + ANHCPGS
Sbjct: 218 GKLLTLHFSIDPKFIKHLEIETRYQIKSYITDIDDGGYESEEQTPGLYVTPISANHCPGS 277
Query: 489 IIILFEP---QNGKA-VLHTGDFRFSEEMASMSVLQTCPIH-------TLILDTTYCNPL 537
I LFE +N + +LH GDFR + E+ S +L+ I + LDTTY +P
Sbjct: 278 TIFLFESIGLENKRTRILHCGDFRVNYEILSHPLLKQFSIDPNSICLDKVYLDTTYMSPA 337
Query: 538 YDFPKQEAVIQFVIEAIQ-------------------------AESFNPKTLFLIGSYTI 572
Y+FPKQE V + V Q + + K L L+G+Y I
Sbjct: 338 YNFPKQELVCETVATMFQDLMKEETKSTSLFSTWFGIGTQSRITDFWKKKFLILVGTYVI 397
Query: 573 GKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW----FTTNE-----HESHIHV 623
GKE+L + +++ L IY++ R K D Q+ TTN+ ++ IH+
Sbjct: 398 GKEKLAIAISKKLNCPIYISNIGSRNKKWDTLKTYDDQYLDSVLTTNDLGDDSSDAIIHL 457
Query: 624 MPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGK------------------ 663
+PM ++S + L + N+Y F V PTGW+FS G
Sbjct: 458 VPMNIVSSTQELSNYFNHNKYFEYFERCVGLRPTGWSFSPGNHREIKDPEIPNHLQELER 517
Query: 664 --KKSPGRRWQQGTIIR-------------------YEVPYSEHCSFTELKEFVKFVSPE 702
KSP + + + Y +PYSEH SF EL FV F +
Sbjct: 518 IMSKSPSFDYLNNILTQVTSTPSKTKGKPDKQLYRIYALPYSEHSSFRELAYFVIFFNIN 577
Query: 703 HIIPSVNNDGRDSANAMVSLL 723
+IP+VN + S AM ++
Sbjct: 578 RVIPTVNCENERSIRAMTDII 598
>gi|412987940|emb|CCO19336.1| predicted protein [Bathycoccus prasinos]
Length = 697
Score = 153 bits (386), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 168/362 (46%), Gaps = 62/362 (17%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK-----------IYCSLITARLVNMK 453
VD F++ D + LTHFH DH GL+ +F+ K IYCS IT L+
Sbjct: 19 VDGFQFQSPDVKAYVLTHFHSDHTVGLSSAFNGDKGGTTNTKKKKLIYCSKITGSLIKEI 78
Query: 454 IGIPWDRLQVLPLNQKTTIAGID--VTCLEANHCPGSII-ILFEPQNGKAVLHTGDFRFS 510
+ + + L+ +T I G VT +ANHCPG+ + F+ + VLHTGDFR
Sbjct: 79 TKVKEEYIVPCELHAETEIEGTSYTVTFFDANHCPGAAMAYFFDKVTKRTVLHTGDFRAD 138
Query: 511 EEMASMS--VLQTCP----IHTLILDTTYCNPLYDFPKQEAVIQ----FVIEAIQAESFN 560
E+ + +++T + L LDTTYCNP YDFP+Q+ ++ V+EA++ E
Sbjct: 139 EDKVQKNEKLMETLKRNGRLDELYLDTTYCNPNYDFPRQKVALECMQKIVLEALREE--- 195
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLR-------------KKIYVNAAKFRVLKCLDFSKE 607
PKTLF +Y++GKE+ F + +R KI V K ++L ++
Sbjct: 196 PKTLFTCSAYSVGKEKAFKAIGDAVRTFFEDNDTNNNNNTKIAVMLKKKQMLTLTEWY-- 253
Query: 608 DIQWFT-----------TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG 656
D FT + E H+ V+ + + RF +VAFSP+G
Sbjct: 254 DDNCFTCFQGEPDDPTGSKAMEQHVRVISHGGKDPHVSMNAILLAEKHRFKRVVAFSPSG 313
Query: 657 WTFSKGKKKSPGRR-------W--QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
W + +K+ W G Y VPYSEH S+ EL FV+ + P I P+
Sbjct: 314 WAWKWQMRKTYEETKCLICEPWIGNDGLTKLYHVPYSEHSSYGELLGFVERIRPRKITPT 373
Query: 708 VN 709
VN
Sbjct: 374 VN 375
>gi|83770372|dbj|BAE60505.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866780|gb|EIT76048.1| putative hydrolase involved in interstrand cross-link repair
[Aspergillus oryzae 3.042]
Length = 773
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/318 (32%), Positives = 151/318 (47%), Gaps = 69/318 (21%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A++ +SKG++ + P + +PG VDAF+Y + G C+ +FL+H+H DHY GLT S
Sbjct: 407 ASEVKSKGKQAYQRTCPFYKIIPGFSICVDAFRYGAVEG-CNAYFLSHYHSDHYIGLTAS 465
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI--AGIDVTCLEANHCPGSIIIL 492
+ HG IYCS T LV ++ + + L + T + G+ VT +EANHCPGS I L
Sbjct: 466 WRHGPIYCSKATGNLVRQQLKVDPRWVVDLEFEKTTEVPNTGVQVTLIEANHCPGSAIFL 525
Query: 493 FEPQNGKA-------VLHTGDFRFSEEMASMSVLQTCPIHTLI------------LDTTY 533
FE G VLH GDFR S ++L+ + ++ LDTTY
Sbjct: 526 FEKAMGSGQSKRIQRVLHCGDFRASPTHVQHALLRPEIVDSVTGQKRQQRIDVCYLDTTY 585
Query: 534 CNPLYDFPKQEAVIQFVIE--------------------------AIQAESFNPKT---- 563
+P Y FP Q VI+ E I ++ FN T
Sbjct: 586 LSPKYSFPSQIDVIEACAELCASLDRGEDEGPAPWQSGKASKEGGGIMSKFFNSVTGSGK 645
Query: 564 ------------LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
L +IG+Y+IGKER+ L +AR L+ KIY A K RV CL+ E
Sbjct: 646 SQERSSRPQGRLLVVIGTYSIGKERICLAIARALKSKIYATAGKQRVCACLE-DAELSSL 704
Query: 612 FTTNEHESHIHVMPMWTL 629
T + E+ +H+ ++ +
Sbjct: 705 LTDDPVEAQVHMQTLFEI 722
>gi|388582449|gb|EIM22754.1| DRMBL-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 546
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 183/418 (43%), Gaps = 93/418 (22%)
Query: 379 AAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRG---DCSHWFLTHFHMDHYQGLTRSF 435
A +S + + P + + G P VDAF + G + L+H H DHYQ L++++
Sbjct: 95 AMSSKSIPKNQRKTPFYKILEGMPIAVDAF--MSGKIPGVEAYVLSHAHSDHYQSLSKNW 152
Query: 436 HHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT-----TIAGIDVTCLEANHCPGSII 490
G IYCS+ITA LV+ G+P + L+ PL+ T + G+ VT ++ANHCPGS I
Sbjct: 153 DAGPIYCSIITASLVHHICGVPKEYLR--PLSNDTAHVIPSTNGVTVTLIDANHCPGSSI 210
Query: 491 ILFEPQ--------NGKA----------VLHTGDFRFSEEMASMSVLQTCPIHTLILDTT 532
+FE + N K+ LH GDFR S + + ++ + LDTT
Sbjct: 211 FVFEGKQSVHAGDSNFKSPWIGSDRIFRYLHCGDFRASPQHVNHPAIKGKKFDAVYLDTT 270
Query: 533 YCNPLYDFPKQEAVI----QFVIEAIQAE-------------SFN--------------- 560
Y NP Y FP Q VI V+ ++ E FN
Sbjct: 271 YLNPNYSFPPQRQVIDACRDLVLANLRGEMQVNESMLDMLKSGFNRVVSSAKNQEEEEKE 330
Query: 561 -----PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
L ++G+Y+IGKER+ VA+ + KI+ + + +L+ + +E T +
Sbjct: 331 EKKISQDVLIVVGTYSIGKERIVKAVAKAINSKIFADKRRQALLRN-EKDEELNNLLTED 389
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP-------- 667
++S +H+ + + + L +++ +++ ++ PTGWT+ S
Sbjct: 390 PYDSQVHIQGLGGV-TINTLPDYLSKFKKKYNRVIGLKPTGWTYKNASSSSSELDINIEY 448
Query: 668 ----------------GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
R T+ Y +PYSEH SFTEL F + +I +VN
Sbjct: 449 LLKRDLNRSFTYRNLFSTRGSNDTVACYGIPYSEHSSFTELTCFALSIDHVRMIATVN 506
>gi|145553259|ref|XP_001462304.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74830382|emb|CAI39059.1| Putative DNA interstrand cross-link repair protein [Paramecium
tetraurelia]
gi|124430143|emb|CAK94931.1| unnamed protein product [Paramecium tetraurelia]
Length = 471
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 169/343 (49%), Gaps = 51/343 (14%)
Query: 396 CCVPGTPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
+ T VD F Y R + +FLTH H DHYQG++ + +G+I+CS +T L+ +
Sbjct: 2 VLISYTNIIVDDFGYARRNPLKRYIYFLTHMHSDHYQGISNGWDYGQIFCSTVTKALLLV 61
Query: 453 KI-GIPWDRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
K G+ + +P+ T I + VT L+ANHCPG+++ILF+ G +LHTGD
Sbjct: 62 KFPGVKG--VMTIPMKTPTEIELCKKYKVKVTFLDANHCPGAVMILFQGYFG-TILHTGD 118
Query: 507 FRFSEEMASMSVLQTCP-------------IHTLILDTTYCNPLYDFPKQEAVIQFVIEA 553
RF+ EM + P I LILD TYC+P++ FP ++ + + E
Sbjct: 119 MRFNMEMIPKNPQLYPPQNISNENGKCSIDIDELILDNTYCDPIFKFPNRDEAFKMLCEI 178
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
I NP + ++GKE L +E+A+ I VN ++ ++ ++F +++FT
Sbjct: 179 IDK---NPNNRVFLCVDSVGKEELMVELAKHYDTVIVVNEQRYEIVTAMNFY---VEYFT 232
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ 673
++ + I V+ + +RLK + +A + TGW + + R
Sbjct: 233 LDKTQGWIEVIRKGEVE--ERLKDKNT---------IAITATGWANTTSYQMPDNR---- 277
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV-NNDGRDS 715
RY +PYS H +F E+ +FVK + P + V NN G+ S
Sbjct: 278 ----RYVIPYSLHSNFNEMHQFVKSIQPALLQKVVKNNTGKSS 316
>gi|389642187|ref|XP_003718726.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae 70-15]
gi|351641279|gb|EHA49142.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae 70-15]
Length = 886
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 185/441 (41%), Gaps = 118/441 (26%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+GR+ + P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT ++ HG
Sbjct: 388 SRGRQAYERTCPFYKIMPGLSICVDAFRYGAVQG-CNAYFLSHFHSDHYIGLTANWTHGP 446
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEPQ 496
IYCS +T L+ ++ + L ++ + G + VT + ANHCPGS + LFE
Sbjct: 447 IYCSKVTGSLIKSQLRTAAKYVVELEFEERFVVPGTEGVVVTMIPANHCPGSSLFLFEKT 506
Query: 497 NGKA-------VLHTGDFR-----------FSEEMASMS-VLQTCPIHTLILDTTYCNPL 537
GK +LH GDFR E + S+S ++ I LDTTY NP
Sbjct: 507 LGKGSSARAQRILHCGDFRACPAHIAHPQLMPEVIDSISGKIKKQKIDICYLDTTYLNPR 566
Query: 538 YDFPKQEAVIQFVIEAIQA---------ESFNPKTL-------------FLIGSYTIG-- 573
Y FP QE VI+ E A ES K L F I S G
Sbjct: 567 YSFPPQEVVIRSCAELCAALHRGLQEKDESVWTKILRRREGVSDNDVSRFFINSDGSGQS 626
Query: 574 ----------------------KERLFL--------------EVARVLRKKIYVNAAKFR 597
K RL + +A+ LR KI+ +A K R
Sbjct: 627 PTKKGSSSACNNHPSALTALNPKSRLLVVCGTYSIGKERICKAIAQALRTKIFASAHKIR 686
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW 657
++ L E T+N E+ +H M M + + L Y F IV F P+GW
Sbjct: 687 IIAQLG-DPELTALMTSNPAEAQVH-MQMLSEIRPETLSDYLATYRAHFGRIVGFRPSGW 744
Query: 658 TF-----SKGKKKSP----------GRRW-----------QQGTI---IRYEVPYSEHCS 688
+ + SP G W Q+G+ + + VPYSEH S
Sbjct: 745 NYRPAGTAANANASPSSVAMTTLLHGGNWRPQYASKDLVPQRGSTNEAMCFGVPYSEHSS 804
Query: 689 FTELKEFVKFVSPEHIIPSVN 709
F EL F+ + E ++P+VN
Sbjct: 805 FRELAMFIMSLHIEKVVPTVN 825
>gi|440468054|gb|ELQ37237.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae Y34]
gi|440489014|gb|ELQ68695.1| DNA cross-link repair protein SNM1 [Magnaporthe oryzae P131]
Length = 886
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 185/441 (41%), Gaps = 118/441 (26%)
Query: 384 SKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
S+GR+ + P + +PG VDAF+Y ++G C+ +FL+HFH DHY GLT ++ HG
Sbjct: 388 SRGRQAYERTCPFYKIMPGLSICVDAFRYGAVQG-CNAYFLSHFHSDHYIGLTANWTHGP 446
Query: 440 IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGID---VTCLEANHCPGSIIILFEPQ 496
IYCS +T L+ ++ + L ++ + G + VT + ANHCPGS + LFE
Sbjct: 447 IYCSKVTGSLIKSQLRTAAKYVVELEFEERFVVPGTEGVVVTMIPANHCPGSSLFLFEKT 506
Query: 497 NGKA-------VLHTGDFR-----------FSEEMASMS-VLQTCPIHTLILDTTYCNPL 537
GK +LH GDFR E + S+S ++ I LDTTY NP
Sbjct: 507 LGKGSSARAQRILHCGDFRACPAHIAHPQLMPEVIDSISGKIKKQKIDICYLDTTYLNPR 566
Query: 538 YDFPKQEAVIQFVIEAIQA---------ESFNPKTL-------------FLIGSYTIG-- 573
Y FP QE VI+ E A ES K L F I S G
Sbjct: 567 YSFPPQEVVIRSCAELCAALHRGLQEKDESVWTKILRRREGVSDNDVSRFFINSDGSGQS 626
Query: 574 ----------------------KERLFL--------------EVARVLRKKIYVNAAKFR 597
K RL + +A+ LR KI+ +A K R
Sbjct: 627 PTKKGSSSACNNHPSALTALNPKSRLLVVCGTYSIGKERICKAIAQALRTKIFASAHKIR 686
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW 657
++ L E T+N E+ +H M M + + L Y F IV F P+GW
Sbjct: 687 IIAQLG-DPELTALMTSNPAEAQVH-MQMLSEIRPETLSDYLATYRAHFGRIVGFRPSGW 744
Query: 658 TF-----SKGKKKSP----------GRRW-----------QQGTI---IRYEVPYSEHCS 688
+ + SP G W Q+G+ + + VPYSEH S
Sbjct: 745 NYRPAGTAANANASPSSVAMTTLLHGGNWRPQYASKDLVPQRGSTNEAMCFGVPYSEHSS 804
Query: 689 FTELKEFVKFVSPEHIIPSVN 709
F EL F+ + E ++P+VN
Sbjct: 805 FRELAMFIMSLHIEKVVPTVN 825
>gi|146182956|ref|XP_001025657.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146143674|gb|EAS05412.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 1701
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/316 (30%), Positives = 152/316 (48%), Gaps = 42/316 (13%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-------GIPWDRLQVLPLNQKT 470
+FLTH H DHYQG+T +++ G IYCS +T +L+ K + ++ Q + LNQ+
Sbjct: 27 YFLTHMHSDHYQGITPNWNFGTIYCSEVTKKLLLNKFPQLQDVRELEMNKQQKICLNQEN 86
Query: 471 TIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ---------- 520
I I+V +ANHCPGS++ +FE G+ +LHTGD RF+E + + +
Sbjct: 87 KIE-INVYLFDANHCPGSVMFMFEGYFGR-ILHTGDMRFNENLIYNNPILYPIEKRNSEL 144
Query: 521 ---TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERL 577
+ I I D TYC+P++ FPK+E Q + E I P LI ++GKE L
Sbjct: 145 KKISLQIDECIFDNTYCDPIFKFPKREKACQMLTEIIDKHKNIPNVRILICVDSLGKEEL 204
Query: 578 FLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKH 637
+ +++ I VN +++ + C+D Q FTTN + I V+ R
Sbjct: 205 LVFLSKHYETLIVVNEQRYQSILCMDIP---YQLFTTNRDQGWIEVI---------RKNE 252
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVK 697
+ + V+ + TGW +G R Y +PYS H +F EL+ F++
Sbjct: 253 KQERMESKNEYCVSITCTGWANIQGYITKDDR--------NYLLPYSLHSNFEELELFIR 304
Query: 698 FVSPEHIIPSVNNDGR 713
+ P + V N +
Sbjct: 305 SIYPSVLNTVVRNQAK 320
>gi|365989754|ref|XP_003671707.1| hypothetical protein NDAI_0H02910 [Naumovozyma dairenensis CBS 421]
gi|343770480|emb|CCD26464.1| hypothetical protein NDAI_0H02910 [Naumovozyma dairenensis CBS 421]
Length = 754
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 187/406 (46%), Gaps = 102/406 (25%)
Query: 405 VDAFKYLRGD----CSHWFLTHFHMDHYQGLTRSFHHG-----------KIYCSLITARL 449
VD F Y + ++FL+HFH DH GL +S+ KIYCS IT+ L
Sbjct: 302 VDGFNYSTSNEKKKLEYYFLSHFHSDHTIGLCKSWFERNNLNNSTATSPKIYCSPITSLL 361
Query: 450 VNMKIGIPWD-RLQVLPLNQKTTIAG------IDVTCLEANHCPGSIIILF-----EPQN 497
+ G + ++ L +N TI I+V +ANHCPGS+I +F + Q
Sbjct: 362 LQHVYGFKLNEQIAELEINVPMTIFNDDLEETIEVVAHDANHCPGSLIFIFTIKNVQTQT 421
Query: 498 GKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQ--------- 548
+ +LHTGDFR + EM S Q + LDTTY NPLY+FP Q++V+
Sbjct: 422 TRHILHTGDFRCNNEMISKLQKQFKKFDAVYLDTTYLNPLYEFPNQKSVVNITSQFAKNV 481
Query: 549 ------------------FVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL----- 585
++ +++ + + K LFL+GSY+IGKE++ L + +
Sbjct: 482 TQMGLKKFFNNEQKSIMSYLTTSMKKSNHSNKILFLVGSYSIGKEKIALGILNAISTSLP 541
Query: 586 --RKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR----LKHMS 639
+ +IY+N + ++ FS + ++ +T H+S+IH++ + TL S + LK++
Sbjct: 542 DDKPRIYING---KTIRSKIFSSDTERFQSTTPHDSNIHLVSLSTLRSNESISSYLKNL- 597
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKK----------------------SPGRRWQQGTII 677
N + I+ F PTGWTF+ KK + ++ I
Sbjct: 598 NIKESSYDDIIGFVPTGWTFNNRYKKLEFPLDTIDDRLDFLLKEKDILNSSDDFEMDWIK 657
Query: 678 R----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN-NDG 712
R +++PYSEH SF EL +F + ++ +VN ND
Sbjct: 658 RQYKPFNKFQIFKIPYSEHSSFKELCKFGCLIEWGKMLSTVNLNDS 703
>gi|47219683|emb|CAG12605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 250
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 151/331 (45%), Gaps = 97/331 (29%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
P + +PGT F VDAF+Y + + + +FLTHFH DHY GLT++ +YC+ IT LV
Sbjct: 2 PFYKKIPGTKFVVDAFRYGKIEGITTYFLTHFHSDHYGGLTKN-STLPVYCNKITGNLVR 60
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
K+ + + VLP+N + + G+ V L+ANH
Sbjct: 61 SKLKVAEQYIHVLPMNTQVAVDGVTVVLLDANH--------------------------- 93
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLFLIGSY 570
YC+P Y FP Q+ VI F A + + NP+T+ + GSY
Sbjct: 94 ---------------------YCSPEYTFPTQQEVINFAASTAFEEVALNPRTIVVCGSY 132
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
++GKE++F E++ + FS +
Sbjct: 133 SVGKEKVFFELS-------------------ISFSSDS---------------------- 151
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ--QGTIIRYEVPYSEHCS 688
++L+ +++ ++ +VAF PTGWTFS+ + +S G G I Y +PYSEH S
Sbjct: 152 --QKLEQHLARFSSQYDQLVAFKPTGWTFSQ-QVESVGDVQPDVSGNISIYGIPYSEHSS 208
Query: 689 FTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
F ELK FV+++ P IIP+VNN AM
Sbjct: 209 FMELKRFVQWLQPLKIIPTVNNGSWVGRKAM 239
>gi|296422077|ref|XP_002840589.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636808|emb|CAZ84780.1| unnamed protein product [Tuber melanosporum]
Length = 950
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 191/424 (45%), Gaps = 49/424 (11%)
Query: 341 LITDFFLGSITNVKKV----STPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWC 396
+++ FF ++ K+ S T S + +S + + K + + K K P +
Sbjct: 507 VVSPFFSKGPAHISKIPESPSAFTKIMSRNIESQAWASAAKSEMEPRGKWGAQKTCPFFK 566
Query: 397 CVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
+ G VDAFKY C +FL+HFH DHY GLT + HG I+CS TA LV MK+
Sbjct: 567 MLFGGSITVDAFKYGSIPGCQAYFLSHFHSDHYVGLTSKWDHGPIWCSRATANLVRMKLR 626
Query: 456 IPWDRLQVLPLNQKTTIA-GIDVTCLEANHCPGSIIILFEPQ-----NGKAVLHTGDFRF 509
+ +Q P + T + GI V L+ANHCPGS++ LFE + +LH GDFR
Sbjct: 627 VDPKYVQEFPFEEWTDVVDGIRVRGLDANHCPGSMLFLFEQDCVGRLGKQRILHCGDFRA 686
Query: 510 SEEMASMSVLQTC-------PIHTLILDTTYCNPLYDFPKQEAVIQFVIE---AIQAESF 559
S + + +L+ + ++ LDTTY NP Y FP Q++VI+ E + ES
Sbjct: 687 SAKHLNHPLLRPGKDGVKGQKLDSVYLDTTYLNPKYAFPSQKSVIKACEELCVGLNKESI 746
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
+ + + T+ + +L I K + K F+ + ++ S
Sbjct: 747 DGQGGTFAKTATLMNRMGKFGSSSLLWGPIVSEKRKSELQKL--FAPKSSHHKIRSKFAS 804
Query: 620 HIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS------------------- 660
+H+ P+ + + L+ N++ FS IV P+GW++
Sbjct: 805 -VHMTPLMKINP-ETLRDYLNKFNPHFSRIVGLRPSGWSYRPPSNRLTDSPSVNNVLHSA 862
Query: 661 --KGKKKSPGRRWQQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDS 715
KG+ + Q G+ Y VPYSEH SF EL F ++ IIP+VN S
Sbjct: 863 SWKGEYRLSELLPQHGSTRESKCYSVPYSEHSSFRELTMFCCALNIRKIIPTVNIGSEAS 922
Query: 716 ANAM 719
+ M
Sbjct: 923 RDKM 926
>gi|302781672|ref|XP_002972610.1| hypothetical protein SELMODRAFT_97697 [Selaginella moellendorffii]
gi|300160077|gb|EFJ26696.1| hypothetical protein SELMODRAFT_97697 [Selaginella moellendorffii]
Length = 243
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 117/218 (53%), Gaps = 9/218 (4%)
Query: 383 QSKGRKHKDIPTWCCVPGTPFRVDAF-KYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKI 440
S R D P +PGT F VD GD S +FLTHFH DHY GL S+ G I
Sbjct: 26 HSYSRFPSDFPFHKRIPGTRFVVDGLGAQCAGDWSRAYFLTHFHGDHYAGLAPSWDKGMI 85
Query: 441 YCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-PQNGK 499
+CS +T LV +G+ D + L +N I VT ++ANHCPG++ L E P++G
Sbjct: 86 FCSQVTGHLVVGALGVRRDFVVELAMNSVIWIDECQVTLVDANHCPGAVQFLVEVPEHGT 145
Query: 500 AVLHTGDFRFSEEMA-SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI---- 554
+HTGD RF+ M S+ + LDTTYCNP + FP QE I ++ E I
Sbjct: 146 RFVHTGDMRFTPVMKEDASLCNFVGADAVFLDTTYCNPKFVFPAQEESISYIAETIERMM 205
Query: 555 -QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
Q E +TLFLI +Y IGKE++ L VA + IYV
Sbjct: 206 LQEERSQQRTLFLISTYVIGKEKILLAVAERCKCMIYV 243
>gi|159479866|ref|XP_001698007.1| hypothetical protein CHLREDRAFT_176829 [Chlamydomonas reinhardtii]
gi|158273806|gb|EDO99592.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1384
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 173/400 (43%), Gaps = 101/400 (25%)
Query: 392 IPTWCCVPGT--PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+P +PGT VDAF+Y +FLTH H DHY GL+ ++ G +YCS +TARL
Sbjct: 35 VPAHKVIPGTGGAVTVDAFRYAHPGVKAYFLTHAHSDHYTGLSEAWCAGPVYCSELTARL 94
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFE-------------- 494
V G+ L+ LPL + + G ++VT ++ANHCPG++ +LF
Sbjct: 95 VAHLTGVSTAWLRPLPLGRPVVVEGLVEVTLVDANHCPGAVQLLFRVLPRGGGGGAAGGG 154
Query: 495 ---------------------------PQNGKAV--LHTGDFRFSEEMAS---MSVLQTC 522
AV LH GD R+S M S + + C
Sbjct: 155 AGGVGGVDATDAAKSAGGSTRGADAGCSSGAGAVRYLHCGDMRYSPAMQSWPQLGAWRGC 214
Query: 523 PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVA 582
+ LDTTYC P + FP Q+ + +V I ER L
Sbjct: 215 --EGVFLDTTYCQPKHTFPTQDEAVDYVASQIH-------------------ERTGL--- 250
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKED----------IQWFTTNEHESHIHVMPMWTLAS- 631
+I+V++ K VL+ L + + FT + S +HV+ TL
Sbjct: 251 -----RIHVSSTKLDVLRLLLPPEPNPDPDAGVAAAAHVFTDDPAASPVHVVGWGTLGET 305
Query: 632 --FKRLKHMSNQYAGRF---SLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
+ R ++ Q A +V F PTGWT+ K+S +G + + VPYSEH
Sbjct: 306 WPYFRPNFVNMQRAAEIMGARCVVGFVPTGWTYE--MKRSVFSVHSKGALSVHLVPYSEH 363
Query: 687 CSFTELKEFVKFVSPEHIIPSV-----NNDGRDSANAMVS 721
S+ EL E+VK++ P +IP+V + +G + AM++
Sbjct: 364 SSYPELLEYVKWLRPRQVIPTVGVKEGDREGERARAAMLA 403
>gi|327271542|ref|XP_003220546.1| PREDICTED: 5' exonuclease Apollo-like [Anolis carolinensis]
Length = 563
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 161/323 (49%), Gaps = 36/323 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+PGTP VD + + + +FL+H H DH GL+ +++ IYCS +T +++ +K+ +
Sbjct: 6 IPGTPIAVDFWNIRKAAQARLFFLSHMHTDHTVGLSSTWNR-PIYCSPLTGQILRLKLKV 64
Query: 457 PWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
+ L + + +A + VT ++ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 65 SEQWIHPLEVGESHVLALDEIGKETMTVTLIDANHCPGSVMFLFEGYFG-IILYTGDFRY 123
Query: 510 SEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
S M L+ I+TL LD T C P + P +E + + E I+A +P L IG
Sbjct: 124 SPNMQQEEALKNKKLINTLYLDNTNCYPSFVLPSRETATEQIKEVIRA---HPSHLVKIG 180
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
YT+G+E L +E+A I V+ + ++ L +D+ FT+ E IH +
Sbjct: 181 IYTLGRESLLVELAHEFHTWIVVSPRRLEIMHLLGL--DDV--FTSEEWAGRIHAV---- 232
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCS 688
F ++ + + +A PT K PG Y VPYS+H S
Sbjct: 233 --DFSEIRQATMISWNQIHPTIAVLPTS---RPVKINHPGA---------YVVPYSDHSS 278
Query: 689 FTELKEFVKFVSPEHIIPSVNND 711
F EL EFV ++ P IIP V ++
Sbjct: 279 FEELLEFVAWLKPCSIIPVVKSE 301
>gi|405973753|gb|EKC38445.1| DNA cross-link repair 1B protein [Crassostrea gigas]
Length = 609
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 38/337 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+PGTP VD +K + +FLTH H DH GL+ S+ H KIYCS +T +L+ + I
Sbjct: 6 IPGTPIAVDFWKTRECPNARLFFLTHLHGDHIVGLSSSWQH-KIYCSEVTGKLLVERYDI 64
Query: 457 PWDRLQVLPLNQKTT---------IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
D + PL + I + VT + A+HCPGS++ LFE K +L+TGDF
Sbjct: 65 --DASLISPLETGCSHILYVDSDQIEQMSVTVINAHHCPGSVMFLFEGYFSK-ILYTGDF 121
Query: 508 RFSEEMASMSVLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQA-ESFNPKTL 564
RF EM +++ +H TL LD TY +P FP +E + ++E IQ+ E F+ K
Sbjct: 122 RFDSEMKDDPLMRNI-LHADTLYLDNTYNSPKCVFPSREESFKQMMEIIQSHEDFHIK-- 178
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
IG +GKE L +++A L + I V + F++ + LD D+ F T E ++ I V+
Sbjct: 179 --IGLRNLGKEDLLVKIAVDLNEWIKVPPSFFQLAELLDLP--DV--FITGETDARIEVV 232
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
P +++++ K ++ + + +A PT + G + SP + Y VPYS
Sbjct: 233 PFYSISN-KNIERWNKECP-----TIALLPT--SLYTGLEMSPFCNQEN----VYIVPYS 280
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVS 721
+H SF EL EFVK + P I P V + R + +S
Sbjct: 281 DHSSFDELIEFVKLIKPGCIYPIVCGETRGPFGSSIS 317
>gi|73620753|sp|Q5QJC3.1|DCR1B_CHICK RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|38731581|gb|AAR27405.1| SNM1B [Gallus gallus]
Length = 457
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 159/321 (49%), Gaps = 39/321 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+PGTP VD + R G +FL+H H DH GL+ ++ +YCS +TARL++ ++ +
Sbjct: 6 IPGTPIAVDFWSVRRAGGARLFFLSHMHSDHTVGLSSTWSR-PLYCSPLTARLLHHRLKV 64
Query: 457 PWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
P ++ L + Q + + VT L+ANHCPGS++ LFE G +L+TGDFR+S M
Sbjct: 65 PTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFG-TILYTGDFRYSPAMQR 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
L I L LD T C P P + + ++A Q +P+ +IG Y++GKE
Sbjct: 124 EPALSGRRIDRLYLDNTNCRPHGALPSRS---RAALQAAQLIRRHPQHRVVIGVYSLGKE 180
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM----W-TLA 630
L +++A + V+ ++ ++ L+ + FTT E IH + + W TL
Sbjct: 181 ELLVDLALEFGTWVVVSPSRLEQMRLLELPEV----FTTEEGAGRIHAVDVAEIRWDTLV 236
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
S+ L +A PTG + + +PYS+H SF+
Sbjct: 237 SWNVLHPT-----------IAILPTGRPVKVTHPQI------------HLIPYSDHSSFS 273
Query: 691 ELKEFVKFVSPEHIIPSVNND 711
EL EFVK++ P +IP V D
Sbjct: 274 ELCEFVKWLKPCSVIPIVKGD 294
>gi|347921037|ref|NP_001026671.2| 5' exonuclease Apollo [Gallus gallus]
Length = 504
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/321 (32%), Positives = 157/321 (48%), Gaps = 39/321 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+PGTP VD + R G +FL+H H DH GL+ S +YCS +TARL+ ++ +
Sbjct: 53 IPGTPIAVDFWSVRRAGGARLFFLSHMHSDHTVGLS-STSFSPLYCSPLTARLLYHRLKV 111
Query: 457 PWDRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
P ++ L + Q + + VT L+ANHCPGS++ LFE G +L+TGDFR+S M
Sbjct: 112 PTRWIRPLEVGQSHAVGEEVTVTLLDANHCPGSVMFLFEGAFG-TILYTGDFRYSPAMQR 170
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
L I L LD T C P P + + ++A Q +P+ +IG Y++GKE
Sbjct: 171 EPALSGRRIDRLYLDNTNCRPHGALPSRS---RAALQAAQLIRRHPQHRVVIGVYSLGKE 227
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM----W-TLA 630
L +++A + V+ ++ ++ L+ + FTT E IH + + W TL
Sbjct: 228 ELLVDLALEFGTWVVVSPSRLEQMRLLELPEV----FTTEEGAGRIHAVDVAEIRWDTLV 283
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
S+ L +A PTG + + +PYS+H SF+
Sbjct: 284 SWNVLHP-----------TIAILPTGRPVKVTHPQI------------HLIPYSDHSSFS 320
Query: 691 ELKEFVKFVSPEHIIPSVNND 711
EL EFVK++ P +IP V D
Sbjct: 321 ELCEFVKWLKPCSVIPIVKGD 341
>gi|410899533|ref|XP_003963251.1| PREDICTED: 5' exonuclease Apollo-like [Takifugu rubripes]
Length = 590
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 161/336 (47%), Gaps = 43/336 (12%)
Query: 398 VPGTPFRVDAFKYLRG--DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
+P TP VD F Y+R + +FL+H H DH QGLT ++ H IYCS TA L+ +++
Sbjct: 8 IPRTPLAVD-FWYVRKCPETRLFFLSHMHSDHTQGLTSTWSHRPIYCSPTTATLLRLRLK 66
Query: 456 IP--W------DRLQVLPLNQ--KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
+ W D +LPL+ K T+ VT ++ANHCPGS++ LF+ G ++L+TG
Sbjct: 67 VKEQWIHPLELDEPYMLPLDDIGKETMT---VTLIDANHCPGSVMFLFQGYFG-SILYTG 122
Query: 506 DFRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
DFR++ M L+T I L LD T C+P P ++ Q + E I+ +P
Sbjct: 123 DFRYTPSMLREPCLRTNITIDVLYLDNTNCDPNRTIPTRQRATQQIKEIIRG---HPTHC 179
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
+IG Y +GKE L +++A + I V+ + LK L FTT I V+
Sbjct: 180 VVIGLYALGKETLLVDLAMEFKTWIEVSEGRMETLKALGLPN----VFTTEPGAGRIRVV 235
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
S A RF PT + P + Y VPYS
Sbjct: 236 ------------EQSEIRAARFHQWNTEEPTLAILPTSR---PLVSFHPNI---YVVPYS 277
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV 720
+H S+ EL++FV + P ++P V N S +A+V
Sbjct: 278 DHSSYQELEDFVSALQPTAVVPIVGNHIPGSLSALV 313
>gi|156399461|ref|XP_001638520.1| predicted protein [Nematostella vectensis]
gi|156225641|gb|EDO46457.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 155/319 (48%), Gaps = 38/319 (11%)
Query: 401 TPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
TP VD + R C +FL+H H DH QGLT S+ KIYCS IT R++ K+ +
Sbjct: 9 TPIAVDIWT--RRVCLKSRLFFLSHAHADHTQGLTSSWTKYKIYCSEITKRILMHKLNVN 66
Query: 458 WDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
D L LPL + + + VT L+ANHCPG+++ LFE G +L+TGDFRF
Sbjct: 67 EDLLVALPLGEPVVLPLDEEGREMLTVTLLDANHCPGAVMFLFEGYFG-TILYTGDFRFK 125
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSY 570
M L+ I L LD TYC+P +FP + ++ + + I+ + +I
Sbjct: 126 PAMLLHESLKGKQIDKLYLDNTYCHPSCNFPTKTKTMKLIFDIIRRRLGDD---IIIPLR 182
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
T+GKE L +++A I V K +LK LD D+ FT+ H++ I V
Sbjct: 183 TLGKEDLLVKIALEFNCWIGVTPKKMELLKWLDLP--DV--FTSEWHKTQIIVA------ 232
Query: 631 SFKRLKHMSNQYA-GRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
+H N Y +F PT +G+K +P R VPYS+H SF
Sbjct: 233 -----QHPVNSYTLSQFRDPFVILPTA--LYEGEKSNPYRHLPNYV----TVPYSDHSSF 281
Query: 690 TELKEFVKFVSPEHIIPSV 708
EL FV ++P +IP V
Sbjct: 282 KELLRFVSGIAPAEVIPLV 300
>gi|260809984|ref|XP_002599784.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae]
gi|229285066|gb|EEN55796.1| hypothetical protein BRAFLDRAFT_166573 [Branchiostoma floridae]
Length = 319
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 165/329 (50%), Gaps = 34/329 (10%)
Query: 396 CCVPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
C +P TPF VD +K + D + +FLTH H DH GL+ S+ H IYCS ITA+L+ K
Sbjct: 4 CLIPHTPFAVDFWKSRQSDHTRLFFLTHMHADHTSGLSPSWKH-PIYCSEITAKLLIHKF 62
Query: 455 GIPWDRL--------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
I + ++LPL++ T + VT +ANHCPG+++ LF+ G ++ +TGD
Sbjct: 63 DIAPALVHTLEVGESRMLPLDE-TGQETMTVTVFDANHCPGAVMFLFQGYFG-SIFYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR+S EM VL P I L LD TYC+P FP + Q + + I S +P+
Sbjct: 121 FRYSPEMFDHEVLANRPSIDVLYLDNTYCSPECKFPSRAQATQMIKDII---SRHPEHDI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
++G +GKE + +E+A+ + + V + LK L+ FTT+ I V
Sbjct: 178 VLGMTMLGKEDMLVELAKTFQTWVVVTPQRLETLKLLELPNV----FTTDPEAGRIRVAL 233
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
+ + K+M R + +A P+ +T GK + Q + + VPYS
Sbjct: 234 KYQITR----KNMERWNQERPT--IAILPSALYTGLDGKPYA-----NQPDV--HIVPYS 280
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
+H S EL +FV + P IIP V R
Sbjct: 281 DHSSNGELHDFVSRLKPRSIIPVVKGTSR 309
>gi|291220934|ref|XP_002730478.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae)-like [Saccoglossus kowalevskii]
Length = 939
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/323 (31%), Positives = 166/323 (51%), Gaps = 32/323 (9%)
Query: 396 CCVPGTPFRVDAFKYLRG-DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
C +P TP VD ++ + +FLTH H DH GL+ S+ IYCS ++A+L+ K
Sbjct: 4 CLIPDTPIAVDYWRTRNCPETKLFFLTHMHADHTSGLSPSWK-STIYCSPVSAKLLRAKF 62
Query: 455 GIPWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
I +Q V+PL++ + VT ++ANHCPGS+I LF G VL+TGD
Sbjct: 63 EIQQSLIQSLEVGVGHVIPLDEYGH-ETMTVTPIDANHCPGSVIYLFVGYFG-TVLYTGD 120
Query: 507 FRFSEEM-ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ +M + + + + L LD TY NP FP +E +IE IQ+ +P+
Sbjct: 121 FRYTSDMFLNPPLCKHLCVDVLYLDNTYNNPNCLFPSREECTAKIIEIIQS---HPQHDV 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+G +T+GKE L +++AR +++ I V+ +++ L+ L FTT IH+
Sbjct: 178 KLGMHTLGKENLLVDIARAVQEWIVVSPSRYSTLEQLKMPN----VFTTETDAGRIHL-- 231
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
++S++ K + ++ + I +T G+ S + + VPYS+
Sbjct: 232 ---VSSYQITKKIMKKWNDKRPTIGILPTALYTSLNGQPYSSQKDV-------FVVPYSD 281
Query: 686 HCSFTELKEFVKFVSPEHIIPSV 708
H S+ EL +FV V P+ IIP V
Sbjct: 282 HSSYYELFKFVSQVRPKTIIPIV 304
>gi|449490487|ref|XP_004176715.1| PREDICTED: LOW QUALITY PROTEIN: 5' exonuclease Apollo [Taeniopygia
guttata]
Length = 423
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 156/313 (49%), Gaps = 27/313 (8%)
Query: 400 GTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
GTP VD + R + +FL+H H DH GL+ ++H +YCS ITARL++ ++ +P
Sbjct: 8 GTPIAVDFWSLRRAAGARLFFLSHMHSDHTVGLSSTWHR-PLYCSPITARLLHHRLQVPM 66
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
++ L + Q + + VT +++NHCPGS++ LFE G +L+TGDFR++ M
Sbjct: 67 CWIRPLEVGQSHVVGEVTVTLIDSNHCPGSVMFLFEGTFG-TILYTGDFRYTSAMQDEPA 125
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
L+ I L LD T+C P P + + I+A +P+ +IG Y++GKE L
Sbjct: 126 LRGRHIDRLYLDNTHCQPQRALPSRALATRQAAHLIRA---HPQHHVVIGVYSLGKETLL 182
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
+++A + V+ + ++ L D+ FT E I + + + + L
Sbjct: 183 VDLALEFSTWVVVSPWRLEQMRLLGLP--DV--FTAEEGTGXIRAVDVAEIC-WDALVXW 237
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
+ Q+ ++I P +T + +PYS+H SF EL+EFVK+
Sbjct: 238 NAQHPQPMAIIPTGRPVRFTHPN----------------IHLIPYSDHSSFEELREFVKW 281
Query: 699 VSPEHIIPSVNND 711
+ P IIP V +
Sbjct: 282 LKPCSIIPIVKGE 294
>gi|340502457|gb|EGR29145.1| hypothetical protein IMG5_161990 [Ichthyophthirius multifiliis]
Length = 587
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 157/336 (46%), Gaps = 45/336 (13%)
Query: 398 VPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+ T VD F Y + + +FLTH H DHYQGL++++++G IYCS T RL+ K
Sbjct: 4 ISFTNIVVDEFSYGKQNPLKNYLYFLTHMHSDHYQGLSQNWNYGPIYCSKTTKRLLLQKF 63
Query: 455 GIPWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
R+ L +N++ I I V ++NHCPGS++ +FE G+ +LHTGD
Sbjct: 64 P-HLKRVMALDMNEEIRICINEQNKIYISVYLFDSNHCPGSVMFMFEGYFGR-ILHTGDM 121
Query: 508 RFSEEMASMSVLQ-------------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI 554
RFS +M + + + I I D TYC+P + FP Q+ Q +I+ I
Sbjct: 122 RFSLKMIEKNPILYPLENKDPQKGRCSLQIDECIFDNTYCDPEFQFPDQDKAKQMLIQII 181
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
N + +IGKE +F+ ++ + I VN +++ + C+ Q+FTT
Sbjct: 182 DQHKGNQNLRVFLCMDSIGKEEIFVFLSEYYQTLIVVNEQRYQTILCI--KSLPYQYFTT 239
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQG 674
N ++ I + + R + ++N + + TGW R +
Sbjct: 240 NRNQGWIEI-----IKKVDRRERIANNPDA-----ITITCTGWI--------NIRNYLTW 281
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
I Y VPYS H +F EL+ F+ V P + V N
Sbjct: 282 DNINYLVPYSLHSNFQELELFISSVRPSILNQVVRN 317
>gi|311254550|ref|XP_003125885.1| PREDICTED: 5' exonuclease Apollo-like [Sus scrofa]
Length = 537
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/322 (31%), Positives = 162/322 (50%), Gaps = 38/322 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R C+ +FL+H H DH GL+ ++ +YCS ITA L++ +++
Sbjct: 6 IPHTPIAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWCR-PVYCSPITAYLLHRHLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R +LPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEVGESHILPLDE-VGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTC-PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
F+ M LQ PIHTL LD T CNP P Q+ + ++E I+ +P+ I
Sbjct: 123 FTPSMLKEPALQLGKPIHTLYLDNTNCNPALVLPSQQEAARQIVELIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDHM 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ NQ +A PT RR + + +PYS+H
Sbjct: 236 EICRSAVLRW--NQTHP----TIAILPT------------SRRIYRSHPDIHIIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVN 709
SF+EL+ FV + P ++P V+
Sbjct: 278 SFSELRAFVAALRPCQVVPIVS 299
>gi|326428581|gb|EGD74151.1| DNA cross-link repair 1B protein [Salpingoeca sp. ATCC 50818]
Length = 1328
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 150/316 (47%), Gaps = 25/316 (7%)
Query: 401 TPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDR 460
TP VD ++ G +FLTH H DH GL S+ G+I+CS I+ L+ K I D
Sbjct: 11 TPIAVDTWRQAPG-VRLYFLTHAHADHCNGLISSWRAGRIFCSEISKALIIHKYNIDADL 69
Query: 461 LQVLPLNQKTTIAGID-------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+ L + +K I D VT ++ANHCPG+++ LF+ G VL TGDFR++ +
Sbjct: 70 ITALEVGEKHLIPLDDSGKHTMYVTLIDANHCPGAVMFLFQGYFG-TVLCTGDFRYTPQQ 128
Query: 514 ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIG 573
SVL+ + L LD TYCNP P QE + I +P L+G T+G
Sbjct: 129 --TSVLEGVSVDHLYLDNTYCNPRCRHPSQEMAKMQLFRLIDD---HPDYDILLGVDTLG 183
Query: 574 KERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
KE + L+VA I+V+ + + FTT +S HV+P L K
Sbjct: 184 KEDVLLDVASKYSAAIHVSEPQLATYRVAGIP---CSAFTTQPEDSRFHVVPRHQLT--K 238
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-YEVPYSEHCSFTEL 692
+ ++ A++P+ ++ P + R + VPYS H +F EL
Sbjct: 239 AYVEGYDIQPALGVVLTAYNPSAFS-----TVDPSQHHSVKATTRLHRVPYSLHSNFDEL 293
Query: 693 KEFVKFVSPEHIIPSV 708
+ FV+ + P+ I+P V
Sbjct: 294 QLFVRTIGPKTIVPIV 309
>gi|116267959|ref|NP_001070751.1| 5' exonuclease Apollo [Danio rerio]
gi|115528190|gb|AAI24810.1| Zgc:154089 [Danio rerio]
Length = 571
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 39/324 (12%)
Query: 398 VPGTPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD ++ + C H +FL+H H DH GL+ ++ H IYCS +TA+L+ +K+
Sbjct: 6 LPDTPIAVDCWQLRK--CLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL 63
Query: 455 GIPWDRLQVLPLNQKTTIAGID-------VTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
I ++ L + Q + D V ++ANHCPG+++ LF+ G L+TGDF
Sbjct: 64 QIKQKWIRPLEIGQDHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFGTR-LYTGDF 122
Query: 508 RFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M + LQ I L LD T C+P P ++ Q + + I+ +P +
Sbjct: 123 RYTPSMLRVPCLQNHINIDVLYLDNTNCDPTRALPSRQQATQLIKQIIRD---HPGYAVV 179
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
IG Y++GKE L +++A + + V+ + L+ L D+ FTT+ I V+
Sbjct: 180 IGLYSLGKESLLVDLAMEFKTWVEVDRERLETLRVLQLP--DV--FTTDSGAGRIRVV-- 233
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
NQ S ++A++ T + P Y VPYS+H
Sbjct: 234 -------------NQSMINASNLMAWNKLQSTIAILPTSRPMVSCHPNV---YVVPYSDH 277
Query: 687 CSFTELKEFVKFVSPEHIIPSVNN 710
S+ EL++FV +SP ++P V N
Sbjct: 278 SSYQELEDFVSALSPISLVPIVGN 301
>gi|443899503|dbj|GAC76834.1| predicted hydrolase involved in interstrand cross-link repair
[Pseudozyma antarctica T-34]
Length = 863
Score = 139 bits (350), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/283 (33%), Positives = 136/283 (48%), Gaps = 38/283 (13%)
Query: 300 VESNKDAHVS--NDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVS 357
+ S DA V+ ND S S + R+ + D S+ P++ LGS+ +
Sbjct: 167 LASTLDAKVAPTNDASPSPGPAARNGN----LTDTSNTPSS-------LLGSVKRAASSA 215
Query: 358 TPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDI---PTWCCVPGTPFRVDAFKYLRGD 414
+S S + AA + K R D P + + G P VDAF++ + +
Sbjct: 216 FTVLMKSHSESKQWATADAVEAANYRGKARTRPDARTAPFYKALEGMPLTVDAFRFGKIE 275
Query: 415 -CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI- 472
C +FLTHFH DHY G+T +++HG IYCS+ TA L +G+ L+ LP+ I
Sbjct: 276 GCRGYFLTHFHSDHYGGMTSNWNHGLIYCSVTTANLCRTHLGVDPQWLRPLPMEVAVPIP 335
Query: 473 --AGIDVTCLEANHCPGSIIILFE-PQNGKAV-----------------LHTGDFRFSEE 512
G+ VTC+EANHCPGS + LFE PQ + + LH GDFR S
Sbjct: 336 DSGGVQVTCIEANHCPGSCLFLFEGPQTAQLLSRSHASPHIGTRRIFRYLHCGDFRASPV 395
Query: 513 MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
S + + + LDTTYCNP Y FP Q+ VI+ E ++
Sbjct: 396 HTSHPSIAGKKLDIIYLDTTYCNPRYCFPAQDQVIEACAELVR 438
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 28/174 (16%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIY-VNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
+ L +IG+YTIGKER+ VAR + KI+ +++ K+RV L+ ++ T + +
Sbjct: 652 RLLVVIGTYTIGKERIVKAVARAMHSKIFCMDSRKYRVYAQLE--DPELHAMLTRDPGAA 709
Query: 621 IHVMPMWTL--ASFKRLKHMSNQYAGRFSLIVAFSPTGWTF---SKGKKKSPGR----RW 671
+HV + + + + F+ VAF PTGWT+ + SP +W
Sbjct: 710 VHVTNLHAINGEGLRDVVAALRTRGHNFTHAVAFRPTGWTYRPPAGMDTVSPSLERLVQW 769
Query: 672 QQG----------------TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q + Y VPYSEH SF EL F + II +VN
Sbjct: 770 NQSRSFGPQNLYPTRDSTPDYMIYGVPYSEHSSFFELTAFALGTRYDRIIATVN 823
>gi|358336048|dbj|GAA54614.1| DNA cross-link repair 1A protein [Clonorchis sinensis]
Length = 1386
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/317 (31%), Positives = 154/317 (48%), Gaps = 56/317 (17%)
Query: 445 ITARLVNMKIGIPWDRLQV--LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA-V 501
IT LV++K G + L+V +PLN+ I GIDV ++ANHCPGS++ LF ++ K +
Sbjct: 1049 ITKSLVHIKFG---ENLKVVAIPLNESFPICGIDVVAMDANHCPGSVMFLFHLKSMKRFI 1105
Query: 502 LHTGDFRFSEEM-------ASMSVLQTCPI--------HTLILDTTYCNPLYDFPKQEAV 546
LHTGDFRF +M A + + P+ HT+ LDTTYC+ YDFP Q+ +
Sbjct: 1106 LHTGDFRFHLDMLLPPSPLADIVGMHPIPVSSKAISQLHTVYLDTTYCSSQYDFPPQQVI 1165
Query: 547 IQFVIEAIQAE-SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV-----LK 600
I +E + + +P T+ + G YT+GKER +A L +++++ + ++ L
Sbjct: 1166 IAGAVEVTRGQLEKDPNTVVVCGMYTLGKERFVYGLASELNLRVWLHRNQHQLVSTAALN 1225
Query: 601 CLDFSKEDIQWFTTNEHESHIHVMPMW-----TLASFKRLKHMSN--------QYAGRFS 647
+ +N+ + +HV+PM +L ++R SN R
Sbjct: 1226 GCTVCASLMTHVVSNQQRAQLHVLPMAQLGMSSLIQYRRTLGPSNDQTPFNSASTVNRSR 1285
Query: 648 LIVAFSPTGW--------------TFSKGKKKSPGRRWQQ--GTIIRYEVPYSEHCSFTE 691
+V + PTGW T K G + QQ I Y YSEH S++E
Sbjct: 1286 PLVVWRPTGWSHQTSAKTNKLFQTTLDSSKPLPEGIKLQQCNDNIRIYGAAYSEHSSYSE 1345
Query: 692 LKEFVKFVSPEHIIPSV 708
LK+FV + P + P+V
Sbjct: 1346 LKQFVTHLRPNRVQPTV 1362
>gi|407918638|gb|EKG11907.1| DNA repair metallo-beta-lactamase [Macrophomina phaseolina MS6]
Length = 852
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 139/506 (27%), Positives = 207/506 (40%), Gaps = 109/506 (21%)
Query: 302 SNKDAHVSNDGSSSYHGSERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTN 361
S +D N S + G++R + ++ G + P F LG++ S +
Sbjct: 323 SKQDTPKFNQTSPATDGAKRFQRPARPAKPGQANP--------FTLGAMEGSPS-SAFSK 373
Query: 362 GQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWF 419
SG + + + + K + P + +PG VDAF+Y ++G C +F
Sbjct: 374 LMSGHAEDAAWASAAASEHASRGKPAYQRTCPFYKILPGFSICVDAFRYGAVQG-CEAYF 432
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGID 476
L+HFH DHY GLT ++HHG IYCS +TA LV ++ + + L ++T I G+
Sbjct: 433 LSHFHSDHYIGLTANWHHGLIYCSRVTANLVRQQLRVDPKWIVDLEWEKETEIPGTGGVK 492
Query: 477 VTCLEANHCPGSIIILFE-PQNG------KAVLHTGDFRFSEEMASMSVLQTCPIHTL-- 527
VT + ANHCPGS + LFE P G + VLH GDFR +L+ + T+
Sbjct: 493 VTMIPANHCPGSSLFLFEKPIGGGKQPKMQRVLHCGDFRACRAHIEHPLLRPDLVDTISG 552
Query: 528 ----------ILDTTYCNPLYDFPKQEAVIQFVI-----------------EAIQAESFN 560
LDTTY NP Y FP Q VI+ E ++ E
Sbjct: 553 KSRQQKIDVCYLDTTYLNPKYAFPSQGEVIKACADMCVSLNNARADERNGWEQMKRERAG 612
Query: 561 PKTL-FLIGSYTIGKE-------RLFLEVARVLRKKIYVNAAKFRVLK---CLDFSK--- 606
F+ S GKE + L R K+ V + + K CL +K
Sbjct: 613 KGMANFVQKSSEPGKEDKEEDVDAMKLSNGIKDRGKLLVVVGTYSIGKERMCLGIAKAMD 672
Query: 607 ----------------EDIQW---FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
ED + T + E+ +H+ P++ + + + L Y F+
Sbjct: 673 SKIYAPPGKMRVCAALEDPEMNERLTRDPREAQVHMTPLFEIRA-ETLDDYLKDYRDTFA 731
Query: 648 LIVAFSPTGWTFSKGKKK---SP-------GRRW-----------QQGTIIR---YEVPY 683
V F PTGW + + SP W Q+G+ R + VPY
Sbjct: 732 RAVGFRPTGWNYRPPNSRFTESPLVQTVLHSNNWKSQFSMRDLTPQRGSTSRASCFGVPY 791
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVN 709
SEH SF EL F + + IIP+VN
Sbjct: 792 SEHSSFRELTMFCCALRIDKIIPTVN 817
>gi|366992608|ref|XP_003676069.1| hypothetical protein NCAS_0D01250 [Naumovozyma castellii CBS 4309]
gi|342301935|emb|CCC69706.1| hypothetical protein NCAS_0D01250 [Naumovozyma castellii CBS 4309]
Length = 618
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/392 (30%), Positives = 182/392 (46%), Gaps = 82/392 (20%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV 463
VD F Y + S +FL+HFH DH GL +S++ G I+CS T+ L+ + + ++
Sbjct: 216 VDGFNYSSKPTISQYFLSHFHSDHTIGLVKSWNQGTIFCSPETSLLLQWRYDFAPEMIKE 275
Query: 464 LPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQN-------GKAVLHTGDFRFSEEMAS 515
L + Q+ I I V +A HCPGS+I +FE + K VLHTGDFR + ++ S
Sbjct: 276 LHIAQREWITDTISVISYDAFHCPGSLIFVFEEWDSQSMNTLNKRVLHTGDFRCNNQVLS 335
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI----QFVIEAIQ---------------- 555
+V+ + LDTTY + Y FP+Q++V+ QF + ++
Sbjct: 336 -NVMSLGHYDQVYLDTTYLDSWYRFPRQDSVVETTGQFAKDVMEIGLKKLFGDDQKSIFS 394
Query: 556 -AESFNPK-------TLFLIGSYTIGKERLFLEVARVL----RKKIYVNAAKFRVLKCLD 603
+S N K LFLIGSY++GKE++ LE+ L KI++N R
Sbjct: 395 FMKSQNKKRSRPQSSVLFLIGSYSLGKEKIGLEIQSHLPLGTYNKIFMNGNAVRG----K 450
Query: 604 FSKEDIQWFTTNEHES--HIHVMPMWTLASFKRLKHMSNQYAGR--FSLIVAFSPTGWTF 659
+D ++ + E S +IH++ + L + ++ + + F +V F PTGWTF
Sbjct: 451 LFAQDERFTSDREDMSQCNIHIVSLSVLQCKETVEDYLKSFPDQCGFDDVVGFVPTGWTF 510
Query: 660 S---KGKKK---------------SPGRR--------WQQGTIIRYE------VPYSEHC 687
S KGK+ G+R W +YE +PYSEH
Sbjct: 511 SNRYKGKQTFENMNDRVEFVRGIIEGGKREDDEMSIDWITKQYKKYERFQIFKIPYSEHS 570
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
SF EL F V + I+ +VN + + N M
Sbjct: 571 SFKELCSFGSQVDCDEILATVNLNNLEQLNEM 602
>gi|306755663|sp|B0V2S2.1|DCR1B_DANRE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
Length = 571
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 39/324 (12%)
Query: 398 VPGTPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD ++ + C H +FL+H H DH GL+ ++ H IYCS +TA+L+ +K+
Sbjct: 6 LPDTPIAVDCWQLRK--CLHVRLFFLSHMHSDHTCGLSSTWSHRPIYCSPLTAKLLRLKL 63
Query: 455 GIPWDRLQVLPLNQKTTIAGID-------VTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
I ++ L + Q + D V ++ANHCPG+++ LF+ G L+TGDF
Sbjct: 64 QIKQKWIRPLEIGQDHMLMLDDLGKERLTVNLIDANHCPGAVMFLFQGYFGTR-LYTGDF 122
Query: 508 RFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M + LQ I L LD T C+P P ++ Q + + I+ +P +
Sbjct: 123 RYTPSMLRVPCLQNHINIDVLYLDNTNCDPTRALPSRQQATQQIKQIIRD---HPGYAVV 179
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
IG Y++GKE L +++A + + V+ + L+ L D+ FTT+ I V+
Sbjct: 180 IGLYSLGKESLLVDLAMEFKTWVEVDRERLETLRVLQL--PDV--FTTDSGAGRIRVV-- 233
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
NQ S ++A++ T + P Y VPYS+H
Sbjct: 234 -------------NQSMISASNLMAWNKLQSTIAILPTSRPMVSCHPNV---YVVPYSDH 277
Query: 687 CSFTELKEFVKFVSPEHIIPSVNN 710
S+ EL++FV +SP ++P V N
Sbjct: 278 SSYQELEDFVSALSPISLVPIVGN 301
>gi|356544862|ref|XP_003540866.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 437
Score = 137 bits (346), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 163/331 (49%), Gaps = 63/331 (19%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKTTIA--- 473
+FLTH H DH GLT S+HH ++CS +TA+L+ K G L++L T+
Sbjct: 18 YFLTHLHSDHTHGLTPSWHHAPLFCSAVTAKLLPFKFPGFDLSLLRILHPGTTHTVTLPS 77
Query: 474 -GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE--EMASMS------VLQTCP- 523
+ VT ++A HCPGSI++LF G +L+TGDFR+ E A+ S L+ P
Sbjct: 78 LTLHVTVMDACHCPGSIMLLFRGDFG-CILYTGDFRWEATCERATKSRHVLRDALRHVPA 136
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ + LD TY NP+YDFP + Q +I+ I + +P +IG T+GKE L +E++R
Sbjct: 137 VDVVHLDNTYSNPIYDFPPRHVAAQQIIDIIAS---HPDHEVIIGINTLGKEDLLVEISR 193
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA--SFKRLKHMSNQ 641
L+ I+V + R + L + +DI FTTN + + +P+++ + + + L ++
Sbjct: 194 ALQIMIWVWPQRLRTMHLLGY--DDI--FTTNTSLTRVRAVPVYSFSINTVEELNYVCPT 249
Query: 642 YAGRFSLIVAFSPTG--WT------------------FSKGKKKSPGRRWQQGTIIR--- 678
+ P+G W + +GK + I++
Sbjct: 250 --------IGIMPSGLPWIKKSHQKNELQTGSFLTSRYKRGKLSANTETQIDKQIVKTGS 301
Query: 679 --------YEVPYSEHCSFTELKEFVKFVSP 701
Y VPYS+H ++ E+++FVK V P
Sbjct: 302 PEKIHKYIYTVPYSDHSNYEEIEDFVKLVKP 332
>gi|357125358|ref|XP_003564361.1| PREDICTED: 5' exonuclease Apollo-like [Brachypodium distachyon]
Length = 436
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/353 (31%), Positives = 169/353 (47%), Gaps = 57/353 (16%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL--TRSFHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL R + HG +YCS ITARL+ + GI L
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLDAVRGWRHGPLYCSPITARLLPTRFPGIDVSLL 64
Query: 462 QVLP------LNQKTTIAG----IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF-- 509
+ + L+ + I+G + VT + A HCPGS++ LF G L+TGDFR+
Sbjct: 65 RPIAPGASASLSLTSPISGRPISLLVTAIPALHCPGSLMYLFRGDLG-CRLYTGDFRWEL 123
Query: 510 ------SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
S + A + L + L LD TYC P +FP + V + ++ IQA +P
Sbjct: 124 GCEEARSAKKALLHALAGDSVDVLYLDNTYCYPSLNFPPRRVVAEQIVNIIQA---HPDH 180
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
+IG T+GKE L L ++R L+ KI+V + + L ++ + FTT + I
Sbjct: 181 EVIIGVDTLGKEDLLLHLSRALQMKIWVWPQRLLTMHLLGID-DNQEIFTTQTSLTRIRA 239
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ---------- 673
+P ++L + + L+ + N ++ + P W S+GK KS G+ +
Sbjct: 240 VPRYSL-TIESLEAL-NTVCPTIGIMPSGIPWLWKNSEGKAKSSGKSPTKSFRCKAQERD 297
Query: 674 -GTI---------------IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
GTI Y +PYSEH F+EL+ F++ V P ++ V+
Sbjct: 298 VGTIEMDYDPLSPPKLFENDSYALPYSEHACFSELEAFMQAVRPSTVMGIVSR 350
>gi|444724691|gb|ELW65290.1| 5' exonuclease Apollo [Tupaia chinensis]
Length = 545
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/324 (30%), Positives = 159/324 (49%), Gaps = 38/324 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA +++ ++
Sbjct: 4 VLIPQTPIAVDFWSLRRAGTARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAHILHRRL 62
Query: 455 GIP--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
+ W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVSKQWIRALEVGESHVLPLDE-IGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FRF+ M L IHTL LD T CNP D P ++ +++ I+ +P+ +
Sbjct: 121 FRFTPSMLKEPALTLGKQIHTLYLDNTNCNPALDLPSRQEAAHEIVQLIRK---HPQHII 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLA--DV--FTAEEKAGRIHAV- 232
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ H + R +A PT K PG + +PYS+
Sbjct: 233 -----DHMEICHSRMVHWNRTHPTIAILPTS---RKIHISHPG---------VHVIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSVN 709
H +++EL+ FV + P ++P V+
Sbjct: 276 HSTYSELRAFVAALRPCQVVPIVS 299
>gi|301605077|ref|XP_002932166.1| PREDICTED: DNA cross-link repair 1B protein isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301605079|ref|XP_002932167.1| PREDICTED: DNA cross-link repair 1B protein isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 517
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 161/323 (49%), Gaps = 42/323 (13%)
Query: 398 VPGTPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD ++ R CSH +FL+H H DH GL+ +++ +YCS +TA+++ K+
Sbjct: 6 LPNTPIAVDFWQTRR--CSHIRLFFLSHMHSDHTMGLSSTWNR-PLYCSPVTAKVLKYKL 62
Query: 455 GIP--W-DRLQV-----LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
+ W + L++ LPL+ K + + VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVSNTWINPLEIGEPHMLPLDNKG-LETLTVTLIDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR+S M L I L LD T C+P P + + E I+ +P
Sbjct: 121 FRYSPYMFCYPPLSNKTKIDVLYLDNTNCDPEQKLPSRLEATNMIKEIIEK---HPDHDI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+IG Y IGKE L +++A+ + + V+ + +L L+ E++ FT E IH
Sbjct: 178 MIGVYNIGKESLLVDLAKTFKTWVVVSPQRLELLHILEM--ENV--FTIEEGAGRIH--- 230
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
L + +++ R +A PT + W + + VPYS+
Sbjct: 231 ---LVDQSEVNYINMVRWNRVCPTLAILPTSRKV---------KLWHKDVHV---VPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSV 708
H SF EL+EFV + P ++P V
Sbjct: 276 HSSFEELQEFVSRLKPSSVVPVV 298
>gi|159489990|ref|XP_001702972.1| predicted protein [Chlamydomonas reinhardtii]
gi|158270879|gb|EDO96710.1| predicted protein [Chlamydomonas reinhardtii]
Length = 760
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 5/210 (2%)
Query: 501 VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-QAESF 559
+LHTGD R+ M L + TL LDTTY P + P Q I +++A+ +A +
Sbjct: 298 ILHTGDMRWQRWMRDQPGLAGVRVDTLYLDTTYALPRHRLPPQTEAIAMMVQAMREAVAE 357
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
P TLF++ +Y IGKER FL A+ L K++ K +VL LD + E +
Sbjct: 358 EPATLFVVAAYHIGKERAFLGAAQQLGAKVWAAPDKRKVLALLDLAPEQAALLEERPEAA 417
Query: 620 HIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRY 679
IHV W L + ++++ R+ +V PTGWTF ++K W++G +
Sbjct: 418 DIHV-GGWGLKHEELQAYLASHKGSRWKRVVGIRPTGWTF---RRKGGVSVWREGEVSIL 473
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
VPYSEH S+T+L + V + P+ ++P+VN
Sbjct: 474 GVPYSEHSSWTDLCDAVSQLRPQRVVPTVN 503
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 62/97 (63%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
V GT F VD F + C H+FLTH H DH GL +SF G IYCS +TARL+ +GI
Sbjct: 11 VKGTNFIVDGFAFTSPKCKHYFLTHAHSDHTIGLRKSFSAGVIYCSHVTARLLIHDMGIR 70
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE 494
+ ++ L + I+G+ VT L+ANHCPGS++ LFE
Sbjct: 71 PEVVRPLEVGVPVVISGVRVTPLDANHCPGSVMFLFE 107
>gi|443694810|gb|ELT95851.1| hypothetical protein CAPTEDRAFT_225584 [Capitella teleta]
Length = 465
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 159/329 (48%), Gaps = 40/329 (12%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD +K + +FL+H H DH +GLT ++ H KI+CS +T RL+ K
Sbjct: 20 IPQTPIAVDHWKMTPMSPARVFFLSHMHEDHMKGLTPTWRH-KIHCSPLTKRLLIDKFQ- 77
Query: 457 PWDRLQVLPL-----------NQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
+D QV+ L + +T+ + V+ ++A HCPGS++ +F+ GK + +TG
Sbjct: 78 -FDPSQVVELEPGEDHLVSVTDSETSSFRMTVSVIDAAHCPGSVMFIFQGYFGK-IFYTG 135
Query: 506 DFRFSEE-MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
DFRFS E M ++ T + L LD T+C+P FP + A + +I+AI+ S K
Sbjct: 136 DFRFSSEIMDNLPANYTTDVDVLYLDNTFCSPNCVFPTRAAATEEIIKAIEQSSDAAK-- 193
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
LIG +GKE L +E+A+ + I V + ++ L+ +F T ES I +
Sbjct: 194 ILIGVRNLGKETLLMEIAKRFQCWIQVTERRLEMINLLNLP----NYFQTGS-ESRIEAV 248
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
PM + + Y ++A PT + + VPYS
Sbjct: 249 PM---------DQIKSSYMKNHPEMMAILPTALYIEHPHAFTACKNISL-------VPYS 292
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
+H S+ EL EFV V P ++P V R
Sbjct: 293 DHSSYAELHEFVAMVRPRKVVPIVGEKSR 321
>gi|50289721|ref|XP_447292.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526602|emb|CAG60229.1| unnamed protein product [Candida glabrata]
Length = 736
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 190/448 (42%), Gaps = 118/448 (26%)
Query: 380 AKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY-LRGD--CSHWFLTHFHMDHYQGLTRSFH 436
+K+ + R + G VD F Y L+ D +FL+HFH DHY GL +S+
Sbjct: 277 SKNPRRNRIPESFKILTFTSGYQIIVDGFTYPLKEDNKIKDFFLSHFHSDHYIGLKKSWT 336
Query: 437 HGKIYCSLITARLVNMKIGIPWDR-----------LQVL-PLNQKTTIAGIDVTCLEANH 484
G +Y S +T L+ + P + L+ L P N+ I VT L+ANH
Sbjct: 337 SGNLYSSPVTYELLKYRY-TPKRKTNEDNENITNCLKALKPYNRVWLTDTISVTTLDANH 395
Query: 485 CPGSIIILFEPQNG------KAVLHTGDFRFSEEMASMSVLQTC--PIHTLILDTTYCNP 536
CPG+ + LFE + K +LHTGDFR +++ + T I + LDTTY
Sbjct: 396 CPGASLFLFEEWDSMKTGILKTILHTGDFRSDDKLIEEVLKYTNHREIDEIYLDTTYLLS 455
Query: 537 LYDFPKQEAVIQFV---IEAIQAESFNPK--------------------------TLFLI 567
+ FP QE ++ V IE I +F L+L+
Sbjct: 456 TFTFPAQEELLNMVARFIETINNPNFRQSFFGDKQKSIFHFMSLPSSIDKKSEIPMLYLV 515
Query: 568 GSYTIGKERLFLEVARVLRKKIYV--NAAKFRVL-----KCLDFSKEDIQWFTTNEHESH 620
G+Y+IGKE+L +++A L KIYV N+ K +++ +C D S T + ES
Sbjct: 516 GTYSIGKEKLAIKIAETLNTKIYVQSNSIKRKMVSIYWDQCFDNS-----LLTDDPSESQ 570
Query: 621 IHVMPMWTLASF-------KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS------- 666
IH++ + L F K +K ++ ++ + F PTGWTF KK
Sbjct: 571 IHLVSLKVLRDFNAIDNYLKTIKELTGNKI-KYDNVFGFIPTGWTFGNRYKKDFQYDGEL 629
Query: 667 -----------------------PGR-----------RWQQGTIIRYE---VPYSEHCSF 689
P + R Q RY+ VPYSEH SF
Sbjct: 630 SYDDNFKLRVKYCMDLLKQDEARPTQNFADVSSLEWLRMQYKPRERYQIFRVPYSEHSSF 689
Query: 690 TELKEFVKFVSPEHIIPSVNND-GRDSA 716
EL +F V ++II +VN D G +SA
Sbjct: 690 RELLKFCISVPSKNIISTVNVDNGVNSA 717
>gi|198432441|ref|XP_002122832.1| PREDICTED: similar to DNA cross-link repair 1B (PSO2 homolog, S.
cerevisiae) [Ciona intestinalis]
Length = 868
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 164/334 (49%), Gaps = 38/334 (11%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G P VD FK + H FLTH H DH GL+ + H +YC+ +TA L+ +K GI
Sbjct: 8 GLPVSVDCFKETADERLH-FLTHMHSDHTVGLSSRWCH-TVYCTEVTATLMKLKFGISDT 65
Query: 460 RLQVLPLNQKTTIA----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+Q++ N ++ I V + NHCPG+ + LFE + + +L+TGDFRF+E M
Sbjct: 66 YIQIMDDNHTYCLSCGHTNICVRMIPTNHCPGACMFLFETDSTR-ILYTGDFRFNE-MVE 123
Query: 516 MSVLQTC-----PIHTLILDTTYCNPLYDFP-KQEAVIQFVIEAIQAESFNPKTLFLIGS 569
M V Q C PI L LD TYC P +FP +QEAV+ + +I + + +F G
Sbjct: 124 MEV-QKCLNPIRPIDLLYLDNTYCEPSCNFPSQQEAVLNII--SICRHHIDERIVF--GV 178
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
IG E L VA+ L++ +YV A L L + E + F + ++ +P L
Sbjct: 179 SYIGHENLLCLVAKALQEYVYVEEAMLERL--LLINPEYGKVFRVG-MSARLNAVPNSVL 235
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
+Q++ ++++ PT G + G G +I Y +PYS H ++
Sbjct: 236 N--------GSQWSAVPTVLI--KPTARL---GSMRISGNLSTVG-VITYTIPYSNHSNY 281
Query: 690 TELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
EL++FVK V P I P V GR S M S
Sbjct: 282 QELEKFVKLVKPLKIKPIVL--GRTSYPGMESYF 313
>gi|355682949|gb|AER97012.1| DNA cross-link repair 1B [Mustela putorius furo]
Length = 538
Score = 136 bits (342), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 161/325 (49%), Gaps = 38/325 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ +
Sbjct: 4 ALIPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHL 62
Query: 455 GIP--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
+P W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVPKEWIRALEVGESHVLPLDE-IGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T CNP + P ++ + ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALKLGKQIHTLYLDNTNCNPAWILPSRQEAARQIVELIRK---HPQHNI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV- 232
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ H + + + +A PT R+ + + +PYS+
Sbjct: 233 -----DHMEVCHSAMLHWNQTHPTIAILPTS------------RKIRHSHPDIHVIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNN 710
H S++EL+ FV + P ++P V+
Sbjct: 276 HSSYSELRTFVAALKPGRVVPIVSQ 300
>gi|302784836|ref|XP_002974190.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii]
gi|300158522|gb|EFJ25145.1| hypothetical protein SELMODRAFT_100130 [Selaginella moellendorffii]
Length = 415
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 161/339 (47%), Gaps = 51/339 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKTTIAG-- 474
+FLTH H DH +GL+ + G +YCS +TA L+ + G L +L L T ++
Sbjct: 17 YFLTHLHADHTEGLSADWCRGPLYCSQVTAMLLLARFKGFNPALLHILDLGTPTLVSSNN 76
Query: 475 -----IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM--------SVLQT 521
++VT ++A+HCPG+++ +F + G VLHTGDFR++ + ++ +
Sbjct: 77 AADSLLEVTAIDADHCPGAVMYVFHGEFG-CVLHTGDFRWNNDRCTLEERKEALREAIGG 135
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
+ L LD T+CNPL+ FP + A VIE I+ +P+ +IG +GKE L L +
Sbjct: 136 AQVDFLYLDNTFCNPLFCFPSRNAAATRVIELIRG---HPEKDIVIGIDNLGKEELLLSI 192
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
A+ L KI V + + + L D+ FTT+ + I +P ++++ R + N+
Sbjct: 193 AQALETKICVWPQRLKTMHLLQL--PDV--FTTDTSITRIRAVPRCSVST--RSLKLLNE 246
Query: 642 YAGRFSLIVAFSPTGWTF----SKGKKKSPGRRWQQGTIIRYE----------------- 680
++ PTG S G+K P + E
Sbjct: 247 IRPTLGIL----PTGCLCLCNPSSGRKPKPKLLCSESCYKSRERTSDNQAADASSRLINV 302
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
VPYS HC F+E ++FV + P+ ++ V + S N +
Sbjct: 303 VPYSLHCCFSEARDFVDLIRPKSVLGIVKSSTDYSINPI 341
>gi|306755662|sp|D2H8V8.1|DCR1B_AILME RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|281339477|gb|EFB15061.1| hypothetical protein PANDA_006715 [Ailuropoda melanoleuca]
Length = 529
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 161/324 (49%), Gaps = 38/324 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ +
Sbjct: 4 ALIPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHL 62
Query: 455 GIP--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
+P W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVPKEWIRALEVGESHVLPLDE-IGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T CNP + P ++ + ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALKLGKQIHTLYLDNTNCNPAWVLPSRQEAARQIVELIRK---HPQHNI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTLEEKAGRIHAV- 232
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ H + + + +A PT R+ + + +PYS+
Sbjct: 233 -----DHMEICHSAMLHWNQTHPTIAILPT------------SRKIHRSHPDIHIIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSVN 709
H S++EL+ FV + P ++P V+
Sbjct: 276 HSSYSELRTFVAALKPCQVVPIVS 299
>gi|301765736|ref|XP_002918298.1| PREDICTED: DNA cross-link repair 1B protein-like [Ailuropoda
melanoleuca]
Length = 543
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 161/324 (49%), Gaps = 38/324 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ +
Sbjct: 4 ALIPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHL 62
Query: 455 GIP--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
+P W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVPKEWIRALEVGESHVLPLDE-IGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T CNP + P ++ + ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALKLGKQIHTLYLDNTNCNPAWVLPSRQEAARQIVELIRK---HPQHNI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTLEEKAGRIHAV- 232
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ H + + + +A PT R+ + + +PYS+
Sbjct: 233 -----DHMEICHSAMLHWNQTHPTIAILPT------------SRKIHRSHPDIHIIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSVN 709
H S++EL+ FV + P ++P V+
Sbjct: 276 HSSYSELRTFVAALKPCQVVPIVS 299
>gi|71006690|ref|XP_758011.1| hypothetical protein UM01864.1 [Ustilago maydis 521]
gi|46097512|gb|EAK82745.1| hypothetical protein UM01864.1 [Ustilago maydis 521]
Length = 866
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 107/202 (52%), Gaps = 25/202 (12%)
Query: 379 AAKDQSKGRKH---KDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRS 434
AA + K R + P + + G P VDAF++ + + C +FLTHFH DHY G+T +
Sbjct: 233 AANYRGKARSRPEARTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTAN 292
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
++HG IYCS+ TA L +G+ L+ LP+ + G+ VTC+EANHCPGS +
Sbjct: 293 WNHGPIYCSVTTANLCRTHLGVDPQWLRPLPMEVAVPVPDSGGVMVTCIEANHCPGSCLF 352
Query: 492 LFE-PQNGKAV-----------------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTY 533
LFE PQ + + LH GDFR S + + + + LDTTY
Sbjct: 353 LFEGPQTSQLLSRNHASPYIGTGRIFRYLHCGDFRASPAHTNHPSVAGKKLDIIYLDTTY 412
Query: 534 CNPLYDFPKQEAVIQFVIEAIQ 555
CNP Y FP Q+ VI+ E ++
Sbjct: 413 CNPRYCFPAQDQVIEACAELVR 434
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 28/174 (16%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIY-VNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
+ L +IG+YTIGKER+ VAR + KI+ +++ K+RV L+ ++ T +
Sbjct: 655 RLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLE--DPELHSMLTRSPLAS 712
Query: 621 IHVMPMWTL--ASFKRLKHMSNQYAGRFSLIVAFSPTGWTF---SKGKKKSPGR----RW 671
+HV + + + + + + F+ VAF PTGWT+ + SP +W
Sbjct: 713 VHVTNLHAINGEALRDVVAALRTHGHDFTHAVAFRPTGWTYKPPAGMDTVSPSLDRLIQW 772
Query: 672 QQGT----------------IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Q + Y VPYSEH SF EL F + II +VN
Sbjct: 773 NQSRSFTFHNLLPTRDSTPDYMIYGVPYSEHSSFFELTAFALSTRYDRIIATVN 826
>gi|343428562|emb|CBQ72092.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 871
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 22/188 (11%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
+ P + + G P VDAF++ + + C +FLTHFH DHY G+T +++HG IYCS+ TA
Sbjct: 251 RTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTANWNHGPIYCSVTTAN 310
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFE-PQNGKAV--- 501
L +G+ L+ LP+ + G+ VTC+EANHCPGS + LFE PQ + +
Sbjct: 311 LCRTHLGVDPQWLRPLPMEVAVAVPDSGGVMVTCIEANHCPGSCLFLFEGPQTSQLLSRN 370
Query: 502 --------------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
LH GDFR S + + + + LDTTYCNP Y FP Q+ VI
Sbjct: 371 HASPYIGTGRIFRYLHCGDFRASPVHTNHPSIAGKKLDIIYLDTTYCNPRYCFPAQDQVI 430
Query: 548 QFVIEAIQ 555
+ E ++
Sbjct: 431 EACAELVR 438
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIY-VNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
+ L +IG+YTIGKER+ VAR + KI+ +++ K+RV L+ ++ T +
Sbjct: 660 RLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLE--DPELHSLLTRSPSAS 717
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGR---FSLIVAFSPTGWTFSKGK---KKSPGR----R 670
+HV + + + + L+ + R F+ VAF PTGWT+ SP +
Sbjct: 718 VHVTNLHAI-NGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPPAGLDTVSPSLDRLIQ 776
Query: 671 WQQG----------------TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q + Y VPYSEH SF EL F + II +VN
Sbjct: 777 WNQARSFGCQNLYPTRDSTPDYMIYGVPYSEHSSFFELTAFALCTRYDRIIATVN 831
>gi|448100689|ref|XP_004199411.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
gi|359380833|emb|CCE83074.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
Length = 685
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 187/455 (41%), Gaps = 152/455 (33%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKI-----------------YCSLIT 446
VDAF Y + +FLTHFH DHY GLT+S+ + ++ YCS IT
Sbjct: 187 VDAFNYSPHEEIEQYFLTHFHSDHYGGLTKSWFYERVFGDDNDFSNDSKYRKILYCSEIT 246
Query: 447 ARLVNMKIGIPWDRLQVLPLNQK--------------------TTIAGIDVTCLEANHCP 486
A LV ++ I ++ L LN++ + I G+ VT + ANHCP
Sbjct: 247 ADLVRIRFHIDRRFIRPLCLNKRYLVHVYDSSDLPDGGREEGSSNIPGLYVTLINANHCP 306
Query: 487 GSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVLQT------CP--IHTLILDTTYC 534
GS I LFE + K +LH GDFR ++++ + +L CP + + LDTTY
Sbjct: 307 GSAIFLFESISLDGSTKFILHCGDFRVNKDILAHPLLNKFSLEYDCPFELDEVYLDTTYF 366
Query: 535 NPLYDFPKQEAVIQFVIEAIQ-----------------------------AESFNP---- 561
Y+FPKQE V + + + NP
Sbjct: 367 MSSYNFPKQEKVCEALAHMFNDLSCDKGTGGSDNKSLFTQWFGSLKQSRITDFLNPHNRA 426
Query: 562 --KTLFLIGSYTIGKERLFLEVARVLRKK-IYVNAA----KFRVLKCLDFSKEDIQWFTT 614
K L LIG+Y IGKE++ + +++ LR I+V+ KF +++CL + + T
Sbjct: 427 KKKFLILIGTYLIGKEKIAISLSKKLRNAPIFVSNVFSKDKFSIIRCL--REAYLNSVLT 484
Query: 615 NEH-------ESHIHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFS-KGKK 664
++ + IH++PM + S L + N Y F V P+GWTFS +G
Sbjct: 485 DDDLGKEFGGDCMIHLVPMKIVDSNADLSNYFNHNSYFQHFERCVGVRPSGWTFSGRGAS 544
Query: 665 KS---------------------------------PGRRWQQGTIIR------------- 678
KS PG + + + +
Sbjct: 545 KSESFIPNTNSSELTDLIQTYTPFMSSLVDIMEHDPGYSYHEDILPQVPLGKTSTGKNDM 604
Query: 679 ----YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Y VPYSEH SF EL F+ F ++ IP+VN
Sbjct: 605 SNRIYVVPYSEHSSFRELCYFLVFFRIKNTIPTVN 639
>gi|390346028|ref|XP_003726462.1| PREDICTED: 5' exonuclease Apollo-like [Strongylocentrotus
purpuratus]
Length = 635
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 166/321 (51%), Gaps = 34/321 (10%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+ GTP VD ++ + S +FL+H H DH GL+ ++ + IYCS +T ++V K G+
Sbjct: 6 ITGTPIAVDYWRRNKSPSSKVFFLSHAHSDHTSGLSSTWRY-PIYCSEVTGKVVVAKCGV 64
Query: 457 PWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
++ ++PL++ T + VT ++ANHCPG+ I LFE G+ L+TGDFR
Sbjct: 65 KQSLIKTLSVGNGHIIPLDE-TGKETMTVTLIDANHCPGATIFLFEGYFGR-FLYTGDFR 122
Query: 509 FSEEMASMSVLQ-TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
F M S +VL P+ L LD TY +P +FP ++ ++E + P + ++
Sbjct: 123 FHPCMFSDTVLGLNRPVDRLYLDNTYNSPENNFPGEDDCKVKIMEVLAEY---PYSNVVL 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G + +GKE L +++A KI V + +++ LD +D+ FTT+ E+ I V+P+
Sbjct: 180 GMHQLGKEDLLMDIAEFYGGKIQVTPERLSIIELLDC--KDV--FTTS--EARIRVIPVH 233
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
T+ + Q+ F IV P+ S+ + R ++ + +PYS H
Sbjct: 234 TITN-----SAVEQWNSEFPTIVII-PSAIFRSQRR----SRLANHPSV--FIIPYSSHS 281
Query: 688 SFTELKEFVKFVSPEHIIPSV 708
S+ EL FV V P +IP V
Sbjct: 282 SYNELIRFVTQVRPRKVIPIV 302
>gi|448104432|ref|XP_004200270.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
gi|359381692|emb|CCE82151.1| Piso0_002850 [Millerozyma farinosa CBS 7064]
Length = 688
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 123/455 (27%), Positives = 189/455 (41%), Gaps = 152/455 (33%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKI-----------------YCSLIT 446
VDAF Y + +FLTHFH DHY G+T+S+ + ++ YCS IT
Sbjct: 190 VDAFNYSPHEEIEQYFLTHFHSDHYGGITKSWFYERVFGDDNDFSNDSKYRKILYCSEIT 249
Query: 447 ARLVNMKIGIPWDRLQVLPLNQK--------------------TTIAGIDVTCLEANHCP 486
A LV ++ I ++ L LN++ + + G+ VT + ANHCP
Sbjct: 250 ADLVRIRFHIDQRFIRPLCLNKRYLVHVYDSSDLPNGGKEENGSDVPGLYVTLISANHCP 309
Query: 487 GSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVLQT------CP--IHTLILDTTYC 534
GS I LFE + K +LH GDFR ++++ + ++L CP + + LDTTY
Sbjct: 310 GSAIFLFESISLDGSSKFILHCGDFRVNKDILAHNLLNRFSLEYGCPFELDEVYLDTTYF 369
Query: 535 NPLYDFPKQEAVIQFVIEAIQ-----------------------------AESFNP---- 561
Y+FPKQE V + + + + NP
Sbjct: 370 MSSYNFPKQEKVCEALADMFNDLSCDKGTGGSENKSLFTQWFGSLKQSRITDFLNPHIKT 429
Query: 562 --KTLFLIGSYTIGKERLFLEVARVLRKK-IYVNAA----KFRVLKCLDFSKEDIQWFTT 614
K L LIG+Y IGKE++ + +++ L+ I+V+ KF +++C+ +E + T
Sbjct: 430 KKKFLILIGTYLIGKEKIAISLSKKLKNTPIFVSNVFSKDKFSIIRCI--REEYLNSVLT 487
Query: 615 NEH-------ESHIHVMPMWTLASFKRLKHMSNQ--YAGRFSLIVAFSPTGWTFS-KGKK 664
++ + IH++PM + S L + N Y F V P+GWTFS +G
Sbjct: 488 DDDLGKEFDGDCMIHLVPMKIVDSNTDLSNYFNHNGYFQHFERCVGVRPSGWTFSGRGAS 547
Query: 665 KS---------------------------------PGRRWQQGTIIR------------- 678
KS PG + + + +
Sbjct: 548 KSESFIPNTNSSELTDLIQTYTPFMMNLVDVMGDDPGYSYHEDILPQVPLGKSSKGKNDM 607
Query: 679 ----YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Y VPYSEH SF EL F+ F + IP+VN
Sbjct: 608 SNRIYVVPYSEHSSFRELCYFLVFFRIKKTIPTVN 642
>gi|354543880|emb|CCE40602.1| hypothetical protein CPAR2_106370 [Candida parapsilosis]
Length = 737
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 132/549 (24%), Positives = 210/549 (38%), Gaps = 158/549 (28%)
Query: 319 SERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKK----VSTPTNGQSGS---RKSFS 371
S +KE+ I +G + + I ++ + TN K + P G S S R S
Sbjct: 166 SNENKESRSSISNGKKRKVEKEKIR--YINTETNTDKKPKIIKPPATGTSSSKSRRNEIS 223
Query: 372 GSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGL 431
+ +S + +C P +FLTHFH DHY G+
Sbjct: 224 ALKTMTFPVEKKSGSNYQVSVDAFCFAP------------HAVIDKYFLTHFHADHYGGI 271
Query: 432 TRSFHHGK-----------------IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA- 473
++ + + + IYC+ IT +L+ + I ++ + ++ + +
Sbjct: 272 SKKWAYDRVFKDDTDYDNDAKYKRIIYCTEITGKLLTLYFSIDPRFIKQMAMDTRYKVKD 331
Query: 474 ------------------GIDVTCLEANHCPGSIIILFEP--QNGKA--VLHTGDFRFSE 511
G+ VT + ANHCPG+ I LFE +G+ +LH GDFR +
Sbjct: 332 YGLADVADGGFKSVEDTPGLYVTPITANHCPGAGIFLFESIGLDGRIHRILHCGDFRVNM 391
Query: 512 -----------EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-----AIQ 555
+AS + I + LDTTY NP Y+FPKQE V + V + +Q
Sbjct: 392 TILDHPLLRQFSVASQRIEDLLRIDKVYLDTTYMNPTYNFPKQELVCETVAQLFEHLTVQ 451
Query: 556 AESFNPKTLF------------------------------LIGSYTIGKERLFLEVARVL 585
++ TLF L+G+Y IGKERL + +++ L
Sbjct: 452 EDNKLSNTLFNNWFGVLTQSRITDFWKPTPTVKKKKKFLILVGTYVIGKERLAIAISKRL 511
Query: 586 RKKIYVN-----AAKFRVLKC-----LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
IY + K+ +L+ LD D + + E +H++PM + S + L
Sbjct: 512 HCPIYASNINNRKNKYDILRSYDDDYLDSVLTDDELGRDSGSECIVHLVPMNIVGSVQEL 571
Query: 636 KHM--SNQYAGRFSLIVAFSPTGWTFSKGKKKSP-------------------------- 667
+ N+Y F V PTGW+F++ K P
Sbjct: 572 SNYFNHNRYYESFERCVGLRPTGWSFAQNGKSEPEPSDTIQPTSLGAVAKLMANTTLYTY 631
Query: 668 ------------GRRWQQGTIIR-YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
G+ + R Y +PYSEH SF EL FV F + +IP+VN
Sbjct: 632 MDHILSQVPKSRGKNKPDQELYRIYSIPYSEHSSFRELAYFVVFFNIGQVIPTVNCHNEF 691
Query: 715 SANAMVSLL 723
+ M S++
Sbjct: 692 NVKRMESII 700
>gi|448518002|ref|XP_003867904.1| Pso2 protein [Candida orthopsilosis Co 90-125]
gi|380352243|emb|CCG22467.1| Pso2 protein [Candida orthopsilosis]
Length = 737
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/428 (26%), Positives = 172/428 (40%), Gaps = 136/428 (31%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGK-----------------IYCSLITARLVNMKIGIPWDR 460
+FLTHFH DHY G+++ + + + IYC+ IT +L+ + I
Sbjct: 259 YFLTHFHADHYGGISKKWTYDRVFKDDTDYDNDEKYKRVIYCTEITGKLLTLYFSIDPRF 318
Query: 461 LQVLPLNQKTTI-------------------AGIDVTCLEANHCPGSIIILFEP----QN 497
+Q + ++ + + G+ VT + ANHCPG+ I LFE N
Sbjct: 319 IQQMAMDTRYKVRDYGPVDVADGGFISDEDSPGLYVTPITANHCPGAGIFLFESIGLDGN 378
Query: 498 GKAVLHTGDFRFSEEMASMSVLQ-----------TCPIHTLILDTTYCNPLYDFPKQEAV 546
+LH GDFR + + +L+ + I + LDTTY NP Y+FPKQE V
Sbjct: 379 VHRILHCGDFRVNMTILDHPLLKRFSVSSQRFEDSLRIDKVYLDTTYMNPTYNFPKQELV 438
Query: 547 ---IQFVIEAIQAESFN-------------------------------PKTLFLIGSYTI 572
I + E + A+ N K L L+G+Y I
Sbjct: 439 CDTIAQLFEHLTAQDDNITSNDLFNTWFGMLTQSRITDFWKPTSAMKKKKFLILVGTYVI 498
Query: 573 GKERLFLEVARVLRKKIYVN-----AAKFRVLKC-----LDFSKEDIQWFTTNEHESHIH 622
GKERL + +++ L IY + K+ +L+ LD D + E +H
Sbjct: 499 GKERLAIAISKKLHCPIYASNINNRKNKYDLLRTYEDEYLDSVLTDDELGRGYGSECIVH 558
Query: 623 VMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGKKKSP------------- 667
++PM + S + L + N+Y F V PTGW+F++ KK P
Sbjct: 559 LVPMNIVGSVQELSNYFNHNRYYEAFERCVGLRPTGWSFAQNGKKEPESSDSIQPTPLQA 618
Query: 668 -------------------------GRRWQQGTIIR-YEVPYSEHCSFTELKEFVKFVSP 701
G+ + R Y +PYSEH SF EL FV F +
Sbjct: 619 VADLMANTTTYTYIDNILSQAPKNRGKHKPDQELYRIYSLPYSEHSSFRELAYFVVFFNI 678
Query: 702 EHIIPSVN 709
+IP+VN
Sbjct: 679 GQVIPTVN 686
>gi|388853130|emb|CCF53304.1| uncharacterized protein [Ustilago hordei]
Length = 878
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 25/202 (12%)
Query: 379 AAKDQSKGRKH---KDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTRS 434
AA + K R + P + + G P VDAF++ + + C +FLTHFH DHY G+T +
Sbjct: 239 AANYRGKARSRPEARTAPFYKALEGMPLTVDAFRFGKIEGCRGYFLTHFHSDHYGGMTAN 298
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
++HG IYCS+ TA L +G+ L+ LP+ + G+ VTC+EANHCPGS +
Sbjct: 299 WNHGPIYCSVTTANLCRTHLGVDPQWLRPLPMEVAVPVPDSGGVMVTCIEANHCPGSCLF 358
Query: 492 LFE-PQ---------------NGKAV--LHTGDFRFSEEMASMSVLQTCPIHTLILDTTY 533
LFE PQ GK LH GDFR S + + + + LDTTY
Sbjct: 359 LFEGPQTCQLLSRNHATPYIGTGKIFRYLHCGDFRASPVHTNHPSIVGKKLDIIYLDTTY 418
Query: 534 CNPLYDFPKQEAVIQFVIEAIQ 555
CNP Y FP Q+ VI+ E ++
Sbjct: 419 CNPRYCFPAQDQVIEACAELVR 440
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 30/175 (17%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIY-VNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
+ L +IG+YTIGKER+ VAR + KI+ +++ K+RV L+ ++ T +
Sbjct: 667 RLLVVIGTYTIGKERIVKAVARAMNSKIFCMDSRKYRVYAQLE--DPELHSLLTRSPSAS 724
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGR---FSLIVAFSPTGWTF--SKGKKK-SPGR----R 670
+HV + + + + L+ + R F+ VAF PTGWT+ S G SP +
Sbjct: 725 VHVANLHAI-NGEGLRDVVAALRTRGYDFTHAVAFRPTGWTYKPSAGMDTVSPSLDRLVQ 783
Query: 671 WQQG----------------TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
W Q + Y VPYSEH SF EL F + II +VN
Sbjct: 784 WNQSRSFGPHNLFPTRDSTPDYMIYGVPYSEHSSFFELTAFALSTKYDRIIATVN 838
>gi|74216024|dbj|BAE23700.1| unnamed protein product [Mus musculus]
Length = 541
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 160/323 (49%), Gaps = 38/323 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ Q +++ I+ P+ I
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT K +SP +I Y VPYS+H
Sbjct: 233 ---DHTEICHSAMLQWNQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
S++EL+ FV + P ++P V+
Sbjct: 278 SYSELRAFVAALRPCQVVPIVHQ 300
>gi|70778966|ref|NP_598626.2| 5' exonuclease Apollo isoform a [Mus musculus]
gi|73620758|sp|Q8C7W7.2|DCR1B_MOUSE RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
gi|74141057|dbj|BAE22098.1| unnamed protein product [Mus musculus]
gi|74152210|dbj|BAE32389.1| unnamed protein product [Mus musculus]
Length = 541
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 160/323 (49%), Gaps = 38/323 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ Q +++ I+ P+ I
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT K +SP +I Y VPYS+H
Sbjct: 233 ---DHTEICHSAMLQWNQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
S++EL+ FV + P ++P V+
Sbjct: 278 SYSELRAFVAALRPCQVVPIVHQ 300
>gi|116192517|ref|XP_001222071.1| hypothetical protein CHGG_05976 [Chaetomium globosum CBS 148.51]
gi|88181889|gb|EAQ89357.1| hypothetical protein CHGG_05976 [Chaetomium globosum CBS 148.51]
Length = 830
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 139/313 (44%), Gaps = 50/313 (15%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y + G C +FL+HFH DHY GLT ++ HG IYCS +T LV
Sbjct: 431 PFYRIMPGFSICVDAFRYGAVEG-CQAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGSLV 489
Query: 451 NMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNG---KAVLHT 504
++ + L + + G+ VT + ANHCPGS + LFE G + VLH
Sbjct: 490 KSQLKTAAKYVVELEFEKTVPVPDTNGVMVTMIPANHCPGSSLFLFEKTTGGRTQRVLHC 549
Query: 505 GDFR------------------FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAV 546
GDFR + + + P+ T DT V
Sbjct: 550 GDFRACPAHVEHPKLRPETVDAITGRTKQQKIDASSPMTTANGDTLLRRQRGGASASNKV 609
Query: 547 I--------------------QFVIEAIQAESFNPKTLFLI-GSYTIGKERLFLEVARVL 585
+ A+ N L ++ G+Y+IGKER+ + +A+ L
Sbjct: 610 VSKFFTTASSSTSTKPTPPPPNNAFAALNGRHHNSNRLLVVCGTYSIGKERICVAIAQAL 669
Query: 586 RKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYA-G 644
+ KIY AK R+ K LD E T+N E+ +H+ + L + +++S A G
Sbjct: 670 QTKIYATPAKIRMCKQLD-DPELASLLTSNPTEAQVHMQMLMELRAETLSEYLSAYKARG 728
Query: 645 RFSLIVAFSPTGW 657
FS I+ F P+GW
Sbjct: 729 EFSHIIGFRPSGW 741
>gi|224029987|gb|ACN34069.1| unknown [Zea mays]
gi|413952236|gb|AFW84885.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 438
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 160/342 (46%), Gaps = 55/342 (16%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL--TRSFHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL + HG +YCS TARL+ ++ GI L
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGIDASLL 64
Query: 462 QVLPLNQKTTI----------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS- 510
+ L +I + VT + A HCPGS++ LF G +L+TGDFR+
Sbjct: 65 RPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPGSLMYLFRGDLG-CMLYTGDFRWEL 123
Query: 511 -------EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
+ + L I L LD TYC+P +FP + V + VI+ I++ +P
Sbjct: 124 GCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVIDIIRS---HPDH 180
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
+IG T+GKE L L ++R L+ KI+V + + + L E+ FTT + I
Sbjct: 181 EVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHLLGID-ENRDIFTTQTSLTRIRA 239
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR----------RWQQ 673
+P +++ + L+ + N ++ + P W S+GK KS GR R +
Sbjct: 240 VPRYSV-TIDNLEAL-NTVCPTIGILPSAIPCLWKSSEGKAKSKGRSSVKSIRSSGRGEG 297
Query: 674 GTII--------------RYEVPYSEHCSFTELKEFVKFVSP 701
T + Y +PYSEH F+EL++F+ V P
Sbjct: 298 LTEMDCNPLSPPKLFDKDSYTLPYSEHACFSELEDFMHTVRP 339
>gi|148675641|gb|EDL07588.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 541
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 160/323 (49%), Gaps = 38/323 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ Q +++ I+ P+ I
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT K +SP +I Y VPYS+H
Sbjct: 233 ---DHTEICHSAMLQWNQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
S++EL+ FV + P ++P V+
Sbjct: 278 SYSELRAFVAALRPCQVVPIVHQ 300
>gi|354487402|ref|XP_003505862.1| PREDICTED: 5' exonuclease Apollo-like [Cricetulus griseus]
gi|344252631|gb|EGW08735.1| DNA cross-link repair 1B protein [Cricetulus griseus]
Length = 527
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 38/324 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ T + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDE-TGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASM-SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M +++ IHTL LD T CNP P ++ Q +++ I+ P+ I
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEKVGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT K + PG + +PYS+H
Sbjct: 233 ---DHMEICHSAMLQWNQTHPTIAILPTS---RKVRSPHPG---------IHTIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNND 711
S++EL+ FV + P ++P V
Sbjct: 278 SYSELRAFVAALKPCRVVPIVRQQ 301
>gi|399218889|emb|CCF75776.1| unnamed protein product [Babesia microti strain RI]
Length = 452
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 170/391 (43%), Gaps = 87/391 (22%)
Query: 408 FKYLRGDCSH--WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLP 465
FK L+ S +FLTHFH DHY G+ +++ IY S IT LV +G+ + L
Sbjct: 31 FKRLKCTVSELKYFLTHFHSDHYGGIGKTWS-NTIYTSHITGTLVEKVLGVNPKYICKLQ 89
Query: 466 LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ----T 521
LN+ + + + ANHCPGS++I+FE +GK +LHTGDFR+ + +Q T
Sbjct: 90 LNRVYKLCNFTFSFVGANHCPGSVMIIFEFVSGKRILHTGDFRYHNTILKSLNIQAPDTT 149
Query: 522 CPIH----------------------------TLI----------LDTTYCNPLYDFPKQ 543
C + TLI +DTT+ FP Q
Sbjct: 150 CDLSDVDLLFLTDYESDDSNHDTELKLVDKTATLIDANVIFDIVLMDTTFSLIKGVFPTQ 209
Query: 544 EAVIQFVIEAI--QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKI-YVNAAKFRVLK 600
+ VI VIE + + + K LFL GSY +GKERL+ VA I + N + +++
Sbjct: 210 DVVIAQVIEDVSNHLKECSGKCLFLFGSYLLGKERLYFSVAHKFAMPIVFANQKQHKIIT 269
Query: 601 CL--------------DFSKEDIQWFTTNEHESHIHVMPMWTLASF------------KR 634
L D + DI TN IH++ + L +
Sbjct: 270 SLPLKSKYFSLISNTHDINGNDI----TNGVTGIIHIVSLHLLGTVYPRFIPNMKWIENY 325
Query: 635 LKHMSNQYA--GRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTEL 692
L ++N A F +VA+ PTGW K + Q + V YSEH S +E+
Sbjct: 326 LTEVNNNTASCAEFDRVVAYLPTGWAHKFHMKSN-----QYKNVYATSVSYSEHSSASEI 380
Query: 693 KEFVKFVSPEHIIPSV--NNDGRDSANAMVS 721
++FV + P IIPSV N + R+ M S
Sbjct: 381 EQFVSVLKPRQIIPSVYSNQNEREQILLMYS 411
>gi|440494333|gb|ELQ76726.1| tRNase Z [Trachipleistophora hominis]
Length = 360
Score = 132 bits (333), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
K +P VP T F VD +K L D + FLTHFH DHY GL RSF+ I+CS TA L
Sbjct: 22 KHVPFHRRVPNTTFIVDYYKMLVSDVENTFLTHFHSDHYYGLKRSFNKN-IFCSTTTANL 80
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
V + I + + + +N + +D+ C EANHCPG++ +F QN LHTGDFRF
Sbjct: 81 VKLNIKVDVKYINEMEMNTVYRVDNVDIMCFEANHCPGAVGFIFCVQNV-YYLHTGDFRF 139
Query: 510 SEEM-ASMSVLQTCP--------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
+ EM A++ L + T+ D TY + ++ F Q+ VI VI I + + +
Sbjct: 140 NVEMHANLQSLISIVRPGNNVNYFDTVFYDNTYEDYMH-FDSQDDVIFNVITDIFSRNIS 198
Query: 561 PKTL------FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC 601
TL ++ SY++GKE+LFL VA K+ K ++C
Sbjct: 199 MNTLAPIQTKYVFPSYSVGKEKLFLSVAYFFNWKVKTTEKKIMNIEC 245
>gi|26339774|dbj|BAC33550.1| unnamed protein product [Mus musculus]
Length = 541
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 160/323 (49%), Gaps = 38/323 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ Q +++ I+ P+ I
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEASQQIVQLIRQ---FPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT K +SP +I Y VPYS+H
Sbjct: 233 ---DHTEICHSAMLQWNQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
S++EL+ FV + P ++P V+
Sbjct: 278 SYSELRAFVAALRPCQVVPIVHQ 300
>gi|224079385|ref|XP_002305846.1| predicted protein [Populus trichocarpa]
gi|222848810|gb|EEE86357.1| predicted protein [Populus trichocarpa]
Length = 285
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 118/202 (58%), Gaps = 21/202 (10%)
Query: 525 HTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ---AESFN----PKTLFLIGSYTIGKERL 577
+T+ LDTTYCNP + FP QE + +V+ AI+ E F+ + LFL+ +Y +GKE++
Sbjct: 14 NTVFLDTTYCNPKFVFPLQEESVDYVVSAIEKIGGEGFSGGLEKRVLFLVATYVVGKEKI 73
Query: 578 FLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA------- 630
+E+AR +K+YV+A K VL+ L + + FT +E+ES +HV+ L
Sbjct: 74 LIEIARRCNRKVYVDARKMEVLRVLGCGESGV--FTEDENESDVHVVGWNVLGETWPYFR 131
Query: 631 -SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
+F ++K + + ++ +V F PTGWT+ + K R I + VPYSEH ++
Sbjct: 132 PNFVKMKEIMVERG--YNKVVGFVPTGWTYEVKRNKFAVRSKDSCEI--HLVPYSEHSNY 187
Query: 690 TELKEFVKFVSPEHIIPSVNND 711
EL+E+VKF+ P+ +IP+V D
Sbjct: 188 NELREYVKFLRPKRVIPTVGVD 209
>gi|73981038|ref|XP_848274.1| PREDICTED: 5' exonuclease Apollo [Canis lupus familiaris]
Length = 530
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 158/326 (48%), Gaps = 38/326 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ ++
Sbjct: 4 ALIPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLVHRQL 62
Query: 455 GIP--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
+ W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVSKRWIRALEVGESHVLPLDE-IGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T CNP P ++ + ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALKLGKQIHTLYLDNTNCNPARVLPSRQEAARQIVELIRK---HPQHNI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L ++A R + ++ + +++ L + FT E IH +
Sbjct: 178 KIGLYSLGKESLLEQLALEFRTWVVLSPQRLELVQLLGLANV----FTVEEKAGRIHAVD 233
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ L H + + +A PT R+ + + +PYS+
Sbjct: 234 HMEICRAAVL-HWNQTHP-----TIAILPT------------SRKIHRSHPDIHIIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNND 711
H SF+EL+ FV + P ++P V+
Sbjct: 276 HSSFSELQTFVAALKPCQVVPIVSQQ 301
>gi|323453522|gb|EGB09393.1| hypothetical protein AURANDRAFT_24389, partial [Aureococcus
anophagefferens]
Length = 220
Score = 132 bits (332), Expect = 6e-28, Method: Composition-based stats.
Identities = 72/186 (38%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
Query: 399 PGTPFRVDAFKYLRG--DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-G 455
P F VD F ++R D HW LTH H DH GL +F G IYCS IT RLV + G
Sbjct: 14 PFGAFVVDGFNFVRAFPDVRHWLLTHAHSDHTCGLRANFDAGTIYCSTITKRLVAREFPG 73
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA- 514
DR++ L T+ +T ++A HCPG+++ L ++G LHTGD R S +
Sbjct: 74 RLGDRIETLDPGASVTVGRTTITAIDAGHCPGAVLFLLAHESGATALHTGDMRASPAVTE 133
Query: 515 -SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE-SFNPKTLFLIGSYTI 572
+ L + L LDTTY P DFP Q + + + E + PKTLFL +Y++
Sbjct: 134 ETKKALAGRAVDVLYLDTTYAAPQNDFPSQGEACAVIADVVTQELAREPKTLFLANAYSV 193
Query: 573 GKERLF 578
GKE F
Sbjct: 194 GKENAF 199
>gi|149708883|ref|XP_001495792.1| PREDICTED: 5' exonuclease Apollo [Equus caballus]
Length = 533
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 159/322 (49%), Gaps = 38/322 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R C+ +FL+H H DH GL+ ++ +YCS I+A L++ +++
Sbjct: 6 IPNTPIAVDFWSLRRAGCARLFFLSHMHSDHTVGLSSTWAR-PLYCSPISAYLLHRHLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKRWIRALEVGESHVLPLDEIGR-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L+ IHTL LD T CNP P Q+ + ++E I+ +P+ I
Sbjct: 123 YTPSMLKEPALRVGKQIHTLYLDNTNCNPALVLPSQQEAARQIVELIRK---HPQHHIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + + +A PT + + +PYS+H
Sbjct: 233 ---DHVEICHSAMLHWNQTHPTIAILPTSRKICRSHPDI------------HIIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 278 SYSELRAFVSALKPCQVVPIVS 299
>gi|149030435|gb|EDL85472.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Rattus norvegicus]
Length = 541
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 159/321 (49%), Gaps = 38/321 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ Q +I+ I+ P+ I
Sbjct: 123 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQ---FPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT K +SP +I Y +PYS+H
Sbjct: 233 ---DHMEICHSAMLQWNQTHPTIAIFPT-----SRKIRSP-----HPSI--YSIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSV 708
S++EL+ FV + P ++P V
Sbjct: 278 SYSELRAFVAALRPCQVVPIV 298
>gi|297472828|ref|XP_002686220.1| PREDICTED: 5' exonuclease Apollo [Bos taurus]
gi|358411414|ref|XP_589521.5| PREDICTED: 5' exonuclease Apollo [Bos taurus]
gi|296489426|tpg|DAA31539.1| TPA: DNA cross-link repair 1B [Bos taurus]
Length = 542
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 101/323 (31%), Positives = 156/323 (48%), Gaps = 38/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--M 452
+P TP VD + R G +FLTH H DH GLT ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHL 62
Query: 453 KIGIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
++ W R VLPL++ + VT L+ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVSKQWIRALEVGESHVLPLDE-VGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T CNP P QE + ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALRLGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVELIRK---HPQHNI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L +A + + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVD 233
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ L+ +A PT K + P + +PYS+
Sbjct: 234 HMEICHSAMLRWNQTHPT------IAILPTS---RKIYRSHPN---------IHVIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSV 708
H S++EL+ FV + P ++P V
Sbjct: 276 HSSYSELRVFVAALKPCQVVPIV 298
>gi|440913218|gb|ELR62698.1| 5' exonuclease Apollo, partial [Bos grunniens mutus]
Length = 528
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 158/323 (48%), Gaps = 38/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--M 452
+P TP VD + R G +FLTH H DH GLT ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHL 62
Query: 453 KIGIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
++ W R VLPL++ + VT L+ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVSKQWIRALEVGESHVLPLDE-VGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T CNP P QE + ++E I+ +P+
Sbjct: 121 FRYTPSMLKEPALRPGKQIHTLYLDNTNCNPDLVLPSQEEAARQIVELIRK---HPQHNI 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L +A + + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVD 233
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ L+ NQ +A PT R+ + + +PYS+
Sbjct: 234 HMEICHSAMLRW--NQTHP----TIAILPT------------SRKIYRSHPNIHVIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSV 708
H S++EL+ FV + P ++P V
Sbjct: 276 HSSYSELRVFVAALKPCQVVPIV 298
>gi|225447705|ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
gi|296081253|emb|CBI17997.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 157/332 (47%), Gaps = 53/332 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKTTIA--- 473
+FLTH H DH Q L+ S+ G ++CS +TA+L K L++L + +++
Sbjct: 18 YFLTHLHSDHTQCLSSSWTKGPLFCSRLTAKLFPFKFPNFNLSLLRILEIGSWHSVSLVS 77
Query: 474 -------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHT 526
+DV ++A+HCPG+++ LF G +L TGDFR+ + +T +H
Sbjct: 78 PSSGSETTVDVMAIDAHHCPGAVMYLFRGDFG-CMLFTGDFRWEATNERAKIGRTMLLHA 136
Query: 527 --------LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
L LD TYCNP + FP +EA Q V++ I + +PK +IG T+GKE L
Sbjct: 137 LEGDRVNILYLDNTYCNPSFSFPSREAAAQQVVDIIAS---HPKHDIIIGIDTLGKEDLL 193
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW-----TLASFK 633
L ++R L+ KI+V + + + L F DI FTT + I +P + TL
Sbjct: 194 LYISRSLKVKIWVWPERLQTMHLLGF--HDI--FTTKTSLTRIRAVPRYSFSINTLEGLN 249
Query: 634 RLKHMSNQYAGRFSLIVAFS-----PTG-----------WTFSKGKKKSPGRRWQQGTII 677
++ +V S P G + G + ++ + +++
Sbjct: 250 TVRPTIGIMPSGLPWVVKPSEGNDNPAGPPSISHHCGNKRIINGGPRAEINKKGKLRSVV 309
Query: 678 R-----YEVPYSEHCSFTELKEFVKFVSPEHI 704
R Y VPYSEH F E+++F+K V P +I
Sbjct: 310 RFHQYIYSVPYSEHSCFPEIEDFIKLVQPINI 341
>gi|15223519|ref|NP_174061.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|9802533|gb|AAF99735.1|AC004557_14 F17L21.20 [Arabidopsis thaliana]
gi|17473671|gb|AAL38292.1| unknown protein [Arabidopsis thaliana]
gi|20148601|gb|AAM10191.1| unknown protein [Arabidopsis thaliana]
gi|332192705|gb|AEE30826.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 422
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 158/334 (47%), Gaps = 55/334 (16%)
Query: 412 RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKT 470
R +FLTH H DH +GL+ + G +YCS TA L + G L+V+PL T
Sbjct: 12 RNGSQAYFLTHIHSDHTRGLSGGWSQGPLYCSRTTASLFPSRFPGFDLSLLRVVPLFSWT 71
Query: 471 TIA----------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS----- 515
+++ + + ++A+HCPGSI+ LF G L+TGDFR+ + +
Sbjct: 72 SLSLRSPSSGSTVRLHLMAIDAHHCPGSIMFLFRGDFG-CFLYTGDFRWDSDASDEARTT 130
Query: 516 -MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
++ + P+ L LD TYCNP+Y FP + +Q V + I + +P +I ++GK
Sbjct: 131 LVAAIDEFPVDILYLDNTYCNPIYSFPSRLVAVQLVADIIAS---HPSHDIIIAVDSLGK 187
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
E L + V+R+L KI+V + R + L F +DI FTT+ + + +P ++ S +
Sbjct: 188 EDLLVHVSRILNIKIWVWPERLRTMHLLGF--QDI--FTTDTSLTRVRAVPRYSF-SIQT 242
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFS----KGKKKSPG---------------RRWQQGT 675
L+ ++ + P+G + KG K G + +
Sbjct: 243 LEGLNTMCP-----TIGIMPSGLPWVKRPFKGDDKLSGSFLTASMKNETVSAKKELEAAA 297
Query: 676 IIR-----YEVPYSEHCSFTELKEFVKFVSPEHI 704
+ + Y V YS+H + E+ EF+K V P+ +
Sbjct: 298 VHKFHDYMYSVHYSDHSCYEEIGEFIKLVKPKSM 331
>gi|395535693|ref|XP_003769856.1| PREDICTED: 5' exonuclease Apollo [Sarcophilus harrisii]
Length = 534
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 157/323 (48%), Gaps = 38/323 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R + +FLTH H DH +GL+ ++ +YCS +TARLV ++ +
Sbjct: 6 IPHTPIAVDLWNLRRASSARLFFLTHLHADHTEGLSSTWAR-PLYCSPLTARLVRCRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SPKWIRALEVGESHVLPLDEMGH-ETVTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
+S M L+ IHTL LD T C+P P ++ + + + I+ +P+ I
Sbjct: 123 YSPSMLQEPALRPGKQIHTLYLDNTNCDPALVLPSRQEATRQITDLIRR---HPQHDVKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y +GKE L ++ + I ++ + V++ ++ + D+ FT E IH +
Sbjct: 180 GLYNLGKESLLEQLGLEFQTWIVLSPRRMEVVQLMELA--DV--FTLEEGAGRIHAVNCA 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ + +A PT S PG + VPYS+H
Sbjct: 236 EICWSAMLQ------WNQIHPTIAILPTSRRISFSH---PG---------IHVVPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
SF+EL +FV + P I+P V
Sbjct: 278 SFSELCDFVSALKPCRIVPIVQG 300
>gi|348586607|ref|XP_003479060.1| PREDICTED: 5' exonuclease Apollo-like [Cavia porcellus]
Length = 533
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 169/342 (49%), Gaps = 43/342 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPHTPIAVDFWSLRRAGAARIFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRQLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R+ VLPL++ T + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKRWIRVLEVGESHVLPLDE-TGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ +I+ I+ +P+ I
Sbjct: 123 YTPSMLKYPALALGKQIHTLYLDNTNCNPALVLPSRQEAAHQIIQLIRR---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLA--DV--FTVEEKAGRIHAVEHM 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ NQ +A PT R+ + + +PYS+H
Sbjct: 236 EICRSAMLR--WNQTHP----TIAILPT------------SRQMHRSHPDIHIIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVN-----NDGRDSANAMVSLLL 724
S+TEL FV + P ++P V+ N ++S + M+S+ L
Sbjct: 278 SYTELCAFVAALKPCQVVPIVSRQPCQNYFQNSLSPMLSIPL 319
>gi|297845690|ref|XP_002890726.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
lyrata]
gi|297336568|gb|EFH66985.1| hypothetical protein ARALYDRAFT_472944 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 159/330 (48%), Gaps = 47/330 (14%)
Query: 412 RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKT 470
R +FLTH DH +GL+ + G +YCS ITA L + G L+V+PL T
Sbjct: 12 RKGSQAYFLTHMQSDHTRGLSGGWSKGPLYCSRITASLFPSRFPGFDLSLLRVVPLYSWT 71
Query: 471 TIA----------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF----SEEMASM 516
+++ + ++A+HCPGS++ LF G L+TGDFR+ S+E ++
Sbjct: 72 SLSLRSPSSGSTVRLHFMAIDAHHCPGSMMFLFRGDFG-CFLYTGDFRWDADASDEARTI 130
Query: 517 SV--LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
V + P+ L LD TYCNP+Y FP ++ Q V + I + +P +I ++GK
Sbjct: 131 LVDAIHEFPVDILYLDNTYCNPIYSFPSRQVAAQLVADIIAS---HPSHDIIIAVDSLGK 187
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
E L L V+RVL KI+V + R + L F +D+ FTT+ + + +P ++ S +
Sbjct: 188 EELLLHVSRVLNIKIWVWPERLRTMHLLGF--QDV--FTTDTSLTRVRAVPRYSF-SIQT 242
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG---------------RRWQQGTIIR- 678
L+ + N ++ + P T KG K G + + + +
Sbjct: 243 LEGL-NTMCPTIGIMPSGLPWVKTPFKGDDKLSGSFLTASMKNETISAQKELEAAAVHKF 301
Query: 679 ----YEVPYSEHCSFTELKEFVKFVSPEHI 704
Y V YS+H + E+ EF+K V P+ +
Sbjct: 302 HDYMYSVHYSDHSCYEEIGEFIKLVKPKSM 331
>gi|126311625|ref|XP_001382039.1| PREDICTED: 5' exonuclease Apollo-like [Monodelphis domestica]
Length = 567
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 157/323 (48%), Gaps = 38/323 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH +GL+ ++ +YCS ++ARLV+ ++ +
Sbjct: 6 IPHTPIAVDLWNLRRAGSARLFFLTHLHADHTEGLSSTWAR-PLYCSPLSARLVHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTC-PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L+ IHTL LD T C+P P ++ + E I+ +P+ I
Sbjct: 123 YTPSMLQEPALRLGKQIHTLYLDNTNCDPSLVLPSRQEATHQITELIRQ---HPQHDVKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++ + + ++ + V++ ++ + FT E IH +
Sbjct: 180 GLYSLGKESLLEQLGLEFQTWVVLSPQRMEVVQLMELASV----FTVEEGAGRIHAVNRA 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
++ L+ R +A PT + PG + +PYS+H
Sbjct: 236 EVSWSAMLQ------WNRTHPTIAILPTS---RRIHISHPG---------IHVIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNN 710
SF+EL +FV + P I+P V
Sbjct: 278 SFSELCDFVAALRPCRIVPIVQG 300
>gi|346979369|gb|EGY22821.1| DNA cross-link repair protein pso2/snm1 [Verticillium dahliae
VdLs.17]
Length = 922
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 189/493 (38%), Gaps = 125/493 (25%)
Query: 354 KKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--L 411
KK S T SG +S + ++ + K + P + +PG VDAF+Y +
Sbjct: 387 KKSSAFTQLMSGHAESAAWANAAAADKASRGKAAYERTCPFYKIMPGFNICVDAFRYGAV 446
Query: 412 RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTT 471
+G C +FL+HFH DHY GLT + HG IYCS +T L M++ + + L +
Sbjct: 447 KG-CQAYFLSHFHSDHYIGLTAHWTHGPIYCSKVTGDLCIMQLKVAPKWIVALDFEETVE 505
Query: 472 I---AGIDVTCLEANHCPGSIIILFEPQNGKAV-------LHTGDFRFSE---------- 511
+ G+ VT + ANHCPGS + LFE +GK LH GDFR
Sbjct: 506 VPGTGGVMVTMIPANHCPGSSLFLFEKPHGKGANVKKQRYLHCGDFRACPAHVEHPLLKP 565
Query: 512 --EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK------- 562
+ A L+ I LDTTY NP Y FP QE VI+ + S +P
Sbjct: 566 DVQDAITGKLKQQRIDLCYLDTTYLNPRYSFPPQEDVIRTCADVCAGISPDPNCTTDIWD 625
Query: 563 -----------TLFLI---------------GSYTIGKERLFLEVAR----VLRKKIYVN 592
+ F I GS G F V R+++ V
Sbjct: 626 IMARKGGNGSVSKFFIKPPSPVKEESDTTASGSAKDGTVDFFTNVKEKKPPTCRQRLLVI 685
Query: 593 AAKFRVLK---CLDFSK----------------------EDIQWFTTNEHESHIHVMPMW 627
+ + K C+ ++ E T++ E+ +H M M
Sbjct: 686 CGTYSIGKERICIAIARALKTKIFASPAKIRICSKLGDPELTSLLTSDPLEAQVH-MQML 744
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKG-------------KKKSPG------ 668
+ L+ + Y FS IV F P+GW++ +PG
Sbjct: 745 MEIRAETLQDYLDSYRPHFSRIVGFRPSGWSYRPAPASTGATAASLTSANTAPGTVATTQ 804
Query: 669 ----RRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
W Q+G+ + + VPYSEH SF EL FV + + +IP+VN
Sbjct: 805 ILHSMAWRSRFTAQSVVPQRGSTREAMCFGVPYSEHSSFRELAMFVMALRIDKVIPTVNV 864
Query: 711 DGRDSANAMVSLL 723
S M S +
Sbjct: 865 GSEQSRKRMKSWI 877
>gi|302780583|ref|XP_002972066.1| hypothetical protein SELMODRAFT_96540 [Selaginella moellendorffii]
gi|300160365|gb|EFJ26983.1| hypothetical protein SELMODRAFT_96540 [Selaginella moellendorffii]
Length = 204
Score = 130 bits (326), Expect = 3e-27, Method: Composition-based stats.
Identities = 74/177 (41%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Query: 383 QSKGRKHKDIPTWCCVPGTPFRVDAF-KYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKI 440
S R D P +PGT F VD F GD S +FLTHFH DHY GL S+ G I
Sbjct: 26 HSYSRFPSDFPFHKRIPGTRFVVDGFGAQCAGDWSRAYFLTHFHGDHYAGLAPSWDKGMI 85
Query: 441 YCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-PQNGK 499
+CS +T RLV +G+ D + L +N I VT ++ANHCPG++ L E P++G
Sbjct: 86 FCSQVTGRLVVEALGVRRDFVVELAMNSVIWIDECQVTLVDANHCPGAVQFLVEVPEHGT 145
Query: 500 AVLHTGDFRFSEEMAS-MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
+HTGD RF+ M S+ + LDTTYCNP + FP QE I ++ E I+
Sbjct: 146 RFVHTGDMRFTPVMKEDASLCNFVGADAVFLDTTYCNPKFVFPAQEESISYIAETIE 202
>gi|344275329|ref|XP_003409465.1| PREDICTED: 5' exonuclease Apollo [Loxodonta africana]
Length = 544
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 157/321 (48%), Gaps = 38/321 (11%)
Query: 401 TPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP-- 457
TP VD + R G +FL+H H DH GL+ ++ +YCS ++A L++ ++ +P
Sbjct: 9 TPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPVSAHLLHRRLQVPKQ 67
Query: 458 WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 68 WIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRYIP 125
Query: 512 EMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSY 570
M L+ +HTL LD T CNP P Q+ + +IE I+ P+ IG Y
Sbjct: 126 SMLKEPALRLGKQVHTLYLDNTNCNPALILPSQQEATRQIIELIRK---YPQHNIKIGLY 182
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
++GKE L ++A R + ++ + +++ L + D+ FT +E+ IH + +
Sbjct: 183 SLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLA--DV--FTVDENAGRIHAVDRTEIC 238
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
L + R +A PT R+ + +PYS+H S++
Sbjct: 239 RSTML------HWNRTHPTIAILPT------------SRKIHISHPDIHIIPYSDHSSYS 280
Query: 691 ELKEFVKFVSPEHIIPSVNND 711
EL+ FV + P ++P V+
Sbjct: 281 ELRAFVAALKPCQVVPIVSGQ 301
>gi|255730817|ref|XP_002550333.1| predicted protein [Candida tropicalis MYA-3404]
gi|240132290|gb|EER31848.1| predicted protein [Candida tropicalis MYA-3404]
Length = 687
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 182/454 (40%), Gaps = 139/454 (30%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGK------------------IYCSLI 445
VDAF + + +FLTHFH DHY G+++ + + + IYC+ I
Sbjct: 195 VDAFNFAPHSEIDQYFLTHFHADHYGGISKKWAYERVFGLEDMDYENDSKYRKIIYCTGI 254
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIA-------------------GIDVTCLEANHCP 486
T RL+ ++ I ++ L L+ + I G+ V + ANHCP
Sbjct: 255 TGRLLTLRFSIDPRFIKELELDTRYKIKSYTDDFIENFGVESNDEDPGLYVVPICANHCP 314
Query: 487 GSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVLQ------------TCPIHTLILD 530
G+ I LFE ++H GDFR ++E+ L+ I + LD
Sbjct: 315 GAAIFLFESIGLDNQIHRIIHCGDFRVNKEILDNPTLRQFSLNKKNTIDGVLKIDQVYLD 374
Query: 531 TTYCNPLYDFPKQEAVIQFVIEA---IQAESFNPKTLF---------------------- 565
TTY +P ++ PKQE V V + + E N +LF
Sbjct: 375 TTYMSPKHNLPKQELVCDVVADLFHDLAREQSNKSSLFANWFGALTQSRITDFWRAKAGP 434
Query: 566 ----------LIGSYTIGKERLFLEVARVLRKKIYVNAA-----KFRVLKCL-DFSKEDI 609
+IG+Y IGKE+L L +++ L+ IYV+ K+ + K D E +
Sbjct: 435 TIIKKKKFLIVIGTYIIGKEKLALAISKRLKCMIYVSNIGARRDKYDIFKTYQDPYLESV 494
Query: 610 ---QWFTTNEHESHIHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGKK 664
F + + IH++PM + + + L + N+Y F + PTGW+F++ K+
Sbjct: 495 LSDNEFGNDNDDFVIHLVPMTIVGTVEELSNYFNHNRYYENFERCIGLCPTGWSFNQYKR 554
Query: 665 ----KSPGRRWQQ-----------------------------------GTIIRYEVPYSE 685
SP R + G Y +PYSE
Sbjct: 555 PKRFGSPPRNELEEIIQIMENQTSFSYVDDILAQVPKTTKVTKGKPDIGLYRSYAIPYSE 614
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
H SF EL FV F + + +IP+VN + +S M
Sbjct: 615 HSSFRELAYFVTFFNIDKVIPTVNTEREESNQKM 648
>gi|395842195|ref|XP_003793904.1| PREDICTED: 5' exonuclease Apollo [Otolemur garnettii]
Length = 530
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 166/342 (48%), Gaps = 43/342 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV--NMKI 454
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L+ ++++
Sbjct: 6 IPHTPIAVDFWSLRRAGAARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAHLLRRHLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL+ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEVGESHVLPLDDIGR-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQ-TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M + L I TL LD T CNP P ++ +++ IQ +P+ I
Sbjct: 123 YTPSMLNEPALMFRKQIDTLYLDNTNCNPDMVLPSRQEAAHQIVQLIQK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IHV+
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLA--DV--FTVEEKAGRIHVV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + + +A PT K PG + +PYS+H
Sbjct: 233 ---DHTEICHSTMLHWNQTHPTIAILPTS---RKIHSSHPGI---------HIIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDG-----RDSANAMVSLLL 724
SF+EL+ FV + P ++P V+ RDS + +S+ L
Sbjct: 278 SFSELRAFVAALKPCQVVPIVSQRPCGDYFRDSLSPRLSIPL 319
>gi|306755667|sp|Q4KLY6.2|DCR1B_RAT RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B
Length = 541
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 157/320 (49%), Gaps = 36/320 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 457 PWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
++ L + + + + VT ++ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 65 SKQWIRALEIGESHVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 510 SEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ M L IHTL LD T CNP P ++ Q +I+ I+ P+ IG
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQ---FPQHNIKIG 180
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 181 LYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV---- 232
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCS 688
+ H + + +A PT K +SP +I Y +PYS+H S
Sbjct: 233 --DHMEICHSAMLQWNQTHPTIAIFPT-----SRKIRSP-----HPSI--YSIPYSDHSS 278
Query: 689 FTELKEFVKFVSPEHIIPSV 708
++EL+ FV + P ++P V
Sbjct: 279 YSELRAFVAALRPCQVVPIV 298
>gi|410968088|ref|XP_003990545.1| PREDICTED: 5' exonuclease Apollo [Felis catus]
Length = 541
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 159/322 (49%), Gaps = 38/322 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA LV+ +++
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAYLVHRHLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKKWIRALEVGESHVLPLDE-IGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L+ IHTL LD T CNP P ++ + +IE I+ +P+ I
Sbjct: 123 YTPSMLKEPALKLGKQIHTLYLDNTNCNPARVLPSRQEAARQIIELIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDHM 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L H + + +A PT R+ + +PYS+H
Sbjct: 236 EVCRSAML-HWNQTHP-----TIAILPT------------SRKTHSSHPDIHIIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 278 SYSELRAFVAALKPCQVVPIVH 299
>gi|195343677|ref|XP_002038422.1| GM10813 [Drosophila sechellia]
gi|194133443|gb|EDW54959.1| GM10813 [Drosophila sechellia]
Length = 1332
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 129/234 (55%), Gaps = 14/234 (5%)
Query: 485 CPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQ 543
CPG+++ F+ +G+ +LHTGDFR S +M S+ + I L LDTTY N YDF Q
Sbjct: 926 CPGALMFFFKLSSGECILHTGDFRASADMESLPIFWNHSNIDLLYLDTTYMNKNYDFCHQ 985
Query: 544 EAVIQFVIEAIQA---ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK 600
+ +E ++A ++ + L + GSY IGKE+++L +A+ K++ + + ++
Sbjct: 986 SESVDRAVELVRAFLEKNAAKRILIVCGSYVIGKEKIWLALAKEFTMKVWTESNRSNAVR 1045
Query: 601 CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS 660
CL++ D T + +++HV+ M + S+ L ++ ++ +++ P+GW
Sbjct: 1046 CLNWPDLD-SVLTEDRRGANLHVIAMGKI-SYPNLVDYFTEFEDQYDMLLGIRPSGW--E 1101
Query: 661 KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
K K S G+R I + YSEH S+ EL+ FV+F+ P+ +I +V GRD
Sbjct: 1102 KNSKPSYGKR-----ISTIGIEYSEHSSYKELERFVRFLKPKRVISTVPV-GRD 1149
>gi|294655598|ref|XP_457765.2| DEHA2C01936p [Debaryomyces hansenii CBS767]
gi|199430455|emb|CAG85801.2| DEHA2C01936p [Debaryomyces hansenii CBS767]
Length = 712
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 157/356 (44%), Gaps = 101/356 (28%)
Query: 405 VDAFKYLRGD-CSHWFLTHFHMDHYQGLT------RSFHHGK-----------IYCSLIT 446
VDAF Y + + +FLTHFH DHY G+T R F G I+CS IT
Sbjct: 206 VDAFNYSPHELINKYFLTHFHSDHYGGITKKWCYERVFKDGDDFEDESKYKKIIFCSTIT 265
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGID---------------------VTCLEANHC 485
A+L++++ I + L N++ I D VT + ANHC
Sbjct: 266 AKLLSLRFRIDPKFIMPLETNRRYLIQSFDTDVETEDGFIQTDDLMLPGLFVTPITANHC 325
Query: 486 PGSIIILFE--PQNGK--AVLHTGDFRFSEEMASMSVLQTCPIHT--------LILDTTY 533
PGS+I LFE NG+ VLH GDFR + E+ L T I + LDTTY
Sbjct: 326 PGSVIFLFESLSNNGQRLRVLHCGDFRVNREILDHPRLLTFNIANQGDLCLDKVYLDTTY 385
Query: 534 CNPLYDFPKQEAVIQFVIEAI------QAESFNPKTLF---------------------- 565
+P Y+FPKQE V V + Q E+ +LF
Sbjct: 386 MSPSYNFPKQELVCNTVSDMFYDLIYSQGETETTDSLFTTWFGVLKQSRITDFITKRDNQ 445
Query: 566 --------LIGSYTIGKERLFLEVARVLRK-KIYVNAAKFR-----VLKCLDFSKEDIQW 611
LIG+Y IGKERL + +++ L IYV+ R ++K D + + Q
Sbjct: 446 YKKKKFLVLIGTYVIGKERLAISISQRLNNCPIYVSTINSRNDKVDLVKSFDDNYLN-QV 504
Query: 612 FTTN-----EHESHIHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFS 660
TT+ + E +H++PM ++S + L + N+Y RF V PTGW+FS
Sbjct: 505 LTTDDLGGSDSECMVHLVPMKIVSSLEELSNYFNHNRYFERFERCVGLRPTGWSFS 560
>gi|351697379|gb|EHB00298.1| DNA cross-link repair 1B protein [Heterocephalus glaber]
Length = 533
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 165/341 (48%), Gaps = 41/341 (12%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R + +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 6 IPHTPIAVDFWSLRRARAARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 457 PWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
+QVL + + + + VT ++ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 65 SKQWIQVLEVGESHVLPLDEIGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 510 SEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ M L IHTL LD T CNP P ++ +I+ I+ +P+ IG
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIIQLIRR---HPQHNIKIG 180
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 181 LYSLGKESLLEQLALEFRTWVVLSHQRLELVQLLGLA--DV--FTVEEKAGRIHAVEHME 236
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCS 688
+ L H + + +A PT R+ + + +PYS+H S
Sbjct: 237 ICRSAML-HWNQTHP-----TIAVLPT------------SRKIHRSHPDIHIIPYSDHSS 278
Query: 689 FTELKEFVKFVSPEHIIPSVN-----NDGRDSANAMVSLLL 724
++EL FV + P ++P V+ N +DS + M+S+ L
Sbjct: 279 YSELCAFVAALKPCQVVPIVSRQPCGNYFQDSLSPMLSMPL 319
>gi|196000276|ref|XP_002110006.1| hypothetical protein TRIADDRAFT_21698 [Trichoplax adhaerens]
gi|190588130|gb|EDV28172.1| hypothetical protein TRIADDRAFT_21698, partial [Trichoplax
adhaerens]
Length = 306
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 38/324 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP +D ++ + + S +FL+H+H DH +GL S+ KIYCS ITA L+ ++ I
Sbjct: 8 IPDTPIAIDYWRERQCNQSKLFFLSHYHADHMEGLNSSWSL-KIYCSEITASLLIHEMSI 66
Query: 457 PWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
D + L Q I + VT L+ANHCPG+++ LFE G +L+TGDFR+
Sbjct: 67 RSDLVVSLQTGQPHVIPVDEMGCETMSVTLLDANHCPGAVMFLFEGYFG-CILYTGDFRY 125
Query: 510 SEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+++ Q+ + L LD TYCNP FP + Q ++ IQ NP + +IG
Sbjct: 126 DDQLHLQPGFPQSKQVDQLFLDNTYCNPKAQFPTRHDAFQIILNIIQQ---NPTSNVIIG 182
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFR---VLKCLD-FSKEDIQWFTTNEHESHIHVM 624
+GKE+L ++A L+ I V++ + + +L CL+ F+ + ++++ I
Sbjct: 183 LTHLGKEKLLEQLAVKLQTMIVVDSKRMQRLNLLGCLNVFTDQMDMGRIIVKYKNEI--- 239
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
T ++ +R NQ +G +A PT + + +R Y V YS
Sbjct: 240 ---TDSTIERW----NQQSGP---TIAIIPTALYIYQDRPPILDKRI-------YVVHYS 282
Query: 685 EHCSFTELKEFVKFVSPEHIIPSV 708
+H ++ EL++FV V P I P +
Sbjct: 283 DHSNYNELRQFVSVVKPCRITPII 306
>gi|225683182|gb|EEH21466.1| DNA cross-link repair protein pso2/snm1 [Paracoccidioides
brasiliensis Pb03]
Length = 881
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 143/349 (40%), Gaps = 92/349 (26%)
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA-------VLHTGDFR 508
I WD + +P G+ VT L ANHCPGS + LFE + GK +LH GDFR
Sbjct: 462 IEWDEVFEIP-----ETGGVQVTMLPANHCPGSSLFLFEKEVGKGPKPKIHRILHCGDFR 516
Query: 509 FSEEMASMSVLQTCPIHTLI------------LDTTYCNPLYDFPKQEAVIQFVIEA--- 553
S +L+ + +L LDTTY NP Y FP QE VI
Sbjct: 517 ASPAHVRHPLLRPDVVDSLTGKTKQQTIDVCYLDTTYLNPKYAFPNQEDVITACANVCAN 576
Query: 554 --------IQAESFNPKT-------------------------------LFLIGSYTIGK 574
+ + PKT L ++G+Y+IGK
Sbjct: 577 LDSNENKDVGQATHGPKTTAMKTMVDFLSKNPESQTQPGHQRSKSADRLLVVVGTYSIGK 636
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
ERL + +AR L KIY AAK R+ CL+ +E T+N E+ IH+ + + + +
Sbjct: 637 ERLCIAIARALNCKIYAPAAKQRICACLE-DEELSGLLTSNPIEAQIHMQALMEVRA-ET 694
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP-------GRRWQQGTIIR------ 678
L+ + FS +V F PTGW + + SP WQ R
Sbjct: 695 LRDYLLSFRPHFSRVVGFQPTGWNYRPPAGRTTDSPPVSSVLYSDSWQSRFNARDLIPQR 754
Query: 679 --------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
Y VPYSEH SF EL F + +IP+VN + S + M
Sbjct: 755 GSNPESTCYMVPYSEHSSFRELTMFCCALRIGRVIPTVNVGSKKSRDRM 803
>gi|431896514|gb|ELK05926.1| DNA cross-link repair 1B protein [Pteropus alecto]
Length = 488
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/339 (31%), Positives = 164/339 (48%), Gaps = 39/339 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R + +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPHTPIAVDFWSLRRAASARLFFLTHMHSDHTVGLSSTWAR-PLYCSPITAFLLHRQLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ T + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKKWIRALEVGESHVLPLDE-TGQETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L+ IHTL LD T NP P QE + ++E I+ +P+ I
Sbjct: 123 YTPSMLKEPALRGGKQIHTLYLDNTNYNPELVLPSQEEAARQIVELIRK---HPQHNVKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A R + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEQLALEFRTWVVLSPRRLELVQLLGLA--DV--FTVEEQAGRIHAVDRV 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ NQ +A PT R+ + VPYS+H
Sbjct: 236 EICHSAMLR--WNQTHP----TIAILPT------------SRKIHSSHPDIHVVPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDG-RDSANAMVSLLLN 725
S++EL FV + P ++P V RD A +S L+
Sbjct: 278 SYSELCAFVTALKPCRVVPIVRRQPYRDHFQASLSPTLS 316
>gi|348521498|ref|XP_003448263.1| PREDICTED: 5' exonuclease Apollo-like [Oreochromis niloticus]
Length = 586
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 162/339 (47%), Gaps = 49/339 (14%)
Query: 398 VPGTPFRVDAFKYLRG--DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
+P TP VD F ++R +FL+H H DH GLT ++ + IYCS ITA L+ +K+
Sbjct: 8 IPHTPLAVD-FWHVRKCPGTRLFFLSHMHSDHTTGLTSTWSNRPIYCSPITATLLKLKLQ 66
Query: 456 IPWDRLQVLPLNQKTTIAGID-------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+ + L + + + D VT ++ANHCPG+++ LFE G ++L+TGDFR
Sbjct: 67 VKEQWIHPLEVGEPYLLPLDDIGKERLTVTLIDANHCPGAVMFLFEGYFG-SILYTGDFR 125
Query: 509 FSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L+T I L LD T C+P P ++ Q + E I++ +P +I
Sbjct: 126 YTPSMLREPCLRTYATIDVLYLDNTNCDPNRTLPSRQRATQQIKEIIRS---HPSHNVII 182
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L LE+A + + V+ + LK L+ D+ FTT I +
Sbjct: 183 GLYSLGKESLLLELAMEFKSWVEVSFERMETLKALELP--DV--FTTEPGAGRIRAVDQS 238
Query: 628 TLASFKRLKHMSNQYAGRFSL------IVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEV 681
+ + H N+ ++ +++F P + V
Sbjct: 239 EICA--SALHQWNKEQPTLAILPTSRPLISFHPD----------------------VHVV 274
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV 720
PYS+H S+ EL++FV + P +IP V S +A++
Sbjct: 275 PYSDHSSYQELEDFVSALKPTCLIPIVGKCVPGSLSALL 313
>gi|190345216|gb|EDK37067.2| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC
6260]
Length = 736
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 179/460 (38%), Gaps = 144/460 (31%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL-----------------IT 446
VDAF + S +FLTHFH DHY G+T+ + + +++ SL +T
Sbjct: 245 VDAFSFAPHESISQYFLTHFHADHYGGITKKWSYNRVFSSLEEYEDETKFRRIIYASEVT 304
Query: 447 ARLVNMKIGIPWDRLQVLPLNQK-----------------------TTIAGIDVTCLEAN 483
+RL+ ++ GI ++ L + + ++ G+ VT + AN
Sbjct: 305 SRLLTLRFGIDPRFIKDLKFDTRYCVKFYDDSGSPVDVQDGGYESNDSVPGLYVTPITAN 364
Query: 484 HCPGSIIILFEPQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHT---------LILD 530
HCPG+ I LFE + +LH GDFR S + +L P H + LD
Sbjct: 365 HCPGAAIFLFESISRDLKVYRILHCGDFRVSNVILQHPLL--TPFHAVGGSRALDKVYLD 422
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQ-------------------------------AESF 559
TTY +P Y+FPKQE V + V ++
Sbjct: 423 TTYMDPKYNFPKQELVCETVANMFHRLVYAHASETKPLSNWLGILKQSRITDFMSSGKTK 482
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRK-KIYVNAAKFRVLKCLD----FSKEDIQWFTT 614
K L L+G+Y IGKE L + +++ LR IYV+ R K LD + E + + T
Sbjct: 483 KKKFLILVGTYLIGKENLAIAISKKLRNCPIYVSCINSRSDK-LDIIRTYDNEYLSKYVT 541
Query: 615 NEHESH------IHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
NE +H++PM + S + + N+Y F V PTGW+F + K +
Sbjct: 542 NEDRGDEKCQCVVHLVPMNIVGSKGEISNYFTHNKYYDTFEQCVGLRPTGWSFQEKKTEG 601
Query: 667 PGR--------RWQQ----------GTIIR-------------------------YEVPY 683
W+ TI Y +PY
Sbjct: 602 VNNDEVLEDYGDWETTINMPRAHAINTIADIMLEQPPYAFTDVAPSKTNKAPYNIYSLPY 661
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
SEH SF EL F F + IIP+VN S M ++
Sbjct: 662 SEHSSFRELSYFGIFFNIGKIIPTVNTHNEWSIKRMDDII 701
>gi|149411559|ref|XP_001506464.1| PREDICTED: 5' exonuclease Apollo-like [Ornithorhynchus anatinus]
Length = 563
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 159/324 (49%), Gaps = 40/324 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV--NMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS +T RL+ ++++
Sbjct: 6 IPHTPIAVDFWSLRRAGPARLFFLSHMHSDHTVGLSSTWTR-PLYCSPLTGRLLHHSLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 AERWIRTLEVGESHVLPLDEMGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVL-QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M VL IHTL LD T CNP + P +E + + I+ +P+ I
Sbjct: 123 YAPAMLREPVLSHGKQIHTLYLDNTNCNPAHPLPSREEATRQIAALIRR---HPQHDVKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L E+A + ++ + +++ LD + D+ FT E IH +
Sbjct: 180 GLYSLGKETLLEELALEFGTWVVLSPQRLELVRLLDLA--DV--FTVEEGAGRIHAVNHA 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW-QQGTIIRYEVPYSEH 686
+ L+ S++ +A PT RW Q + VPYS+H
Sbjct: 236 EICRATMLRWNSDRPT------IAILPTS-------------RWVQTAHPDIHVVPYSDH 276
Query: 687 CSFTELKEFVKFVSPEHIIPSVNN 710
SF+EL +FV + P ++P V
Sbjct: 277 SSFSELWDFVVALRPCSVVPIVKG 300
>gi|123367345|ref|XP_001296993.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
gi|121876902|gb|EAX84063.1| DNA repair metallo-beta-lactamase family protein [Trichomonas
vaginalis G3]
Length = 356
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 155/310 (50%), Gaps = 18/310 (5%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
P VPGT F VD H FL+H H DH G+ ++C+ ITA+++ +
Sbjct: 13 PARALVPGTDFTVDWHCKTDPKYVHSFLSHAHSDHIAGIPSFKPPRVLHCTPITAKIILL 72
Query: 453 KIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
+ +Q+ N + I I + + ANH PGS + LFE G+ +LHTGDFR
Sbjct: 73 RYPRLAKCIQIHEYNSEFIIDAITIRIINANHTPGSCMFLFETPLGRKILHTGDFRADNT 132
Query: 513 MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTI 572
+ S+ + CP++ L +D TY F ++ I + IE + E+ TL LIG+YT+
Sbjct: 133 LIE-SIKKFCPVNQLFIDCTYATSKLLFLSRQECINWTIERV-IENMKSNTLTLIGTYTL 190
Query: 573 GKERLFLEVARVLRKKIYVNAAKFR----VLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
GKE L L ++ L IY +++ ++KC + E FT + ++ ++++P+
Sbjct: 191 GKEELVLAISNKLSIPIYAPKDRYKGIVEMIKC-GYCSESC--FTNDPTKTRVYLVPIMD 247
Query: 629 LASFKRLKHMSNQYAGR--FSLIVAFSPTGWTFSKGKKKSPGRRWQQGT-IIRYEVPYSE 685
S ++ +A + +S + A + TGW+ K K+P +Q + YEVPYS+
Sbjct: 248 CNSVS-----ASVWAKQNGYSSVCAIAATGWS-GKAGWKNPQITYQGPIKVTLYEVPYSD 301
Query: 686 HCSFTELKEF 695
H S EL F
Sbjct: 302 HSSPQELLNF 311
>gi|449271670|gb|EMC81954.1| DNA cross-link repair 1B protein, partial [Columba livia]
Length = 450
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 149/306 (48%), Gaps = 40/306 (13%)
Query: 413 GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI 472
G +FL+H H DH GLT ++ +YCS +TARL++ ++ +P ++ L + Q +
Sbjct: 10 GSARLFFLSHMHSDHTVGLTSTWCR-PLYCSPLTARLLHRRLQVPMCWIRPLEVGQSHVL 68
Query: 473 A---GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLIL 529
+ VT L++NHCPGS++ LFE G +L+TGDFR+S M L+ I L L
Sbjct: 69 GEEVTVTVTLLDSNHCPGSVMFLFEGAFG-TILYTGDFRYSSSMQGEPALRGRHIDRLYL 127
Query: 530 DTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKI 589
D T+C+P P ++ + I+ +P+ +IG Y++GKE L +++A +
Sbjct: 128 DNTHCHPEQALPSRQLATRQAAHLIRT---HPQHHVVIGVYSLGKETLLVDLAMEFSTWV 184
Query: 590 YVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM----W-TLASFKRLKHMSNQYAG 644
V+ + ++ L+ D+ FT+ E I + + W TL ++ L
Sbjct: 185 VVSPWRLEQMRLLELP--DV--FTSEEGAGWIRAVDVAEIRWDTLVTWNTLHP------- 233
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+A PTG K + +PYS+H SF EL EFVK++ P +
Sbjct: 234 ----TIAILPTGRPVKVTHPKI------------HTIPYSDHSSFLELCEFVKWLKPCSV 277
Query: 705 IPSVNN 710
IP V
Sbjct: 278 IPIVKG 283
>gi|426216286|ref|XP_004002396.1| PREDICTED: 5' exonuclease Apollo [Ovis aries]
Length = 542
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 156/323 (48%), Gaps = 38/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--M 452
+P TP VD + R G +FLTH H DH GLT ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGSARLFFLTHMHSDHTVGLTSTWTR-PLYCSPITAYLLHRHL 62
Query: 453 KIGIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
++ W R VLPL++ + VT L+ANHCPGS++ LFE G +L+TGD
Sbjct: 63 QVSKQWIRALEVGESHVLPLDE-VGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGD 120
Query: 507 FRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR++ M L+ IHTL LD T NP P QE + +++ I+ +P+
Sbjct: 121 FRYTPSMLKEPALRLGKQIHTLYLDNTNYNPDLVLPSQEEAARQIVDLIRK---HPQHNV 177
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
IG Y++GKE L +A + + ++ + +++ L + D+ FT E IH +
Sbjct: 178 KIGLYSLGKESLLERLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV- 232
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+ H + + +A PT R+ + + +PYS+
Sbjct: 233 -----DHMEICHSAMLRWNQTHPTIAILPT------------SRKIYRSHPDIHVIPYSD 275
Query: 686 HCSFTELKEFVKFVSPEHIIPSV 708
H S++EL+ FV + P ++P V
Sbjct: 276 HSSYSELRVFVAALKPCQVVPIV 298
>gi|426330866|ref|XP_004026426.1| PREDICTED: 5' exonuclease Apollo [Gorilla gorilla gorilla]
Length = 532
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 36/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R S +FL+H H DH GL+ ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGTSRLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL 62
Query: 455 GIPWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
+ +Q L + + + + VT L+ANHCPGS++ LFE G +L+TGDF
Sbjct: 63 QVSKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDF 121
Query: 508 RFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M L IHTL LD T CNP P ++ +++ I+ +P+
Sbjct: 122 RYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIK 178
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 179 IGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDH 234
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
+ L+ +A PT R+ + +PYS+H
Sbjct: 235 MEICHSNMLRWNQTHPT------IAILPT------------SRKIHSSHPDIHVIPYSDH 276
Query: 687 CSFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 277 SSYSELRAFVAALKPCQVVPIVS 299
>gi|224113605|ref|XP_002332533.1| predicted protein [Populus trichocarpa]
gi|222832669|gb|EEE71146.1| predicted protein [Populus trichocarpa]
Length = 360
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 157/328 (47%), Gaps = 60/328 (18%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVL----PLNQKTTIA 473
+FLTH H DH QGLT + G ++CS +TA+L+ K P L +L L TT +
Sbjct: 18 YFLTHLHTDHTQGLTSKWGKGPLFCSKLTAKLLPFK--FPDFNLSLLRHSFSLISPTTGS 75
Query: 474 GID--VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS--------MSVLQTCP 523
I V L+ +HCPG ++ LF + G +++TGDF++ + ++VL+
Sbjct: 76 QITAHVMALDTHHCPGVVMFLFRGEFG-CLMYTGDFQWEVDSKRAKDARSRLLNVLKNET 134
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ L LD TYCNP YDFP +E Q V++ I + + +IG T+GKE L + ++R
Sbjct: 135 VDVLYLDNTYCNPSYDFPTREVAAQQVVDIIASHLEHD---IVIGIDTLGKEELLIHISR 191
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYA 643
VL KI++ + + + L F FTT + + +P ++L S + L+ ++
Sbjct: 192 VLNIKIWLWLERLQTMHLLGFHDT----FTTKNSLTRVRAVPCYSL-SVETLEGLNTMRP 246
Query: 644 GRFSLIVAFSPTG--WTF---------------SKGKKKSP----------GRRWQQGTI 676
+ P+G W S+ KK+ P R+ Q
Sbjct: 247 -----TIGIMPSGLPWVLKPVKGDDNLFGSLLTSRYKKRQPSDKLDGNLAYAERYHQ--- 298
Query: 677 IRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+ VPYS H F E++EF++ V P ++
Sbjct: 299 YMFSVPYSYHLCFAEIQEFIELVQPANM 326
>gi|55587856|ref|XP_524804.1| PREDICTED: 5' exonuclease Apollo [Pan troglodytes]
gi|397468053|ref|XP_003805712.1| PREDICTED: 5' exonuclease Apollo [Pan paniscus]
gi|410216116|gb|JAA05277.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410256044|gb|JAA15989.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410289690|gb|JAA23445.1| DNA cross-link repair 1B [Pan troglodytes]
gi|410330025|gb|JAA33959.1| DNA cross-link repair 1B [Pan troglodytes]
Length = 532
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 152/323 (47%), Gaps = 36/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL 62
Query: 455 GIPWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
+ +Q L + + + + VT L+ANHCPGS++ LFE G +L+TGDF
Sbjct: 63 QVSKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDF 121
Query: 508 RFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M L IHTL LD T CNP P ++ +++ I+ +P+
Sbjct: 122 RYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIK 178
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 179 IGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDH 234
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
+ L+ +A PT R+ + +PYS+H
Sbjct: 235 MEICHSNMLRWNQTHPT------IAILPT------------SRKIHSSHPDIHVIPYSDH 276
Query: 687 CSFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 277 SSYSELRAFVAALKPCQVVPIVS 299
>gi|12383082|ref|NP_073747.1| 5' exonuclease Apollo [Homo sapiens]
gi|73620756|sp|Q9H816.1|DCR1B_HUMAN RecName: Full=5' exonuclease Apollo; AltName: Full=DNA cross-link
repair 1B protein; AltName: Full=SNM1 homolog B;
Short=SNMIB; Short=hSNM1B
gi|10436338|dbj|BAB14807.1| unnamed protein product [Homo sapiens]
gi|20987357|gb|AAH29687.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|56553109|gb|AAV97812.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|119576986|gb|EAW56582.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|325463825|gb|ADZ15683.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae) [synthetic
construct]
Length = 532
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 36/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL 62
Query: 455 GIPWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
+ +Q L + + + + VT L+ANHCPGS++ LFE G +L+TGDF
Sbjct: 63 QVSKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDF 121
Query: 508 RFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M L IHTL LD T CNP P ++ +++ I+ +P+
Sbjct: 122 RYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIK 178
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 179 IGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDH 234
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
+ L+ NQ +A PT R+ + +PYS+H
Sbjct: 235 MEICHSNMLR--WNQTHP----TIAILPT------------SRKIHSSHPDIHVIPYSDH 276
Query: 687 CSFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 277 SSYSELRAFVAALKPCQVVPIVS 299
>gi|71043610|ref|NP_001020858.1| 5' exonuclease Apollo [Rattus norvegicus]
gi|68534320|gb|AAH98939.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 309
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 38/324 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 457 PWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
++ L + + + + VT ++ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 65 SKQWIRALEIGESHVLLLDEIGQETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 510 SEEMASMSVLQTC-PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ M L IHTL LD T CNP P ++ Q +I+ I+ P+ IG
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQ---FPQHNIKIG 180
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 181 LYSLGKESLLEQLALEFQTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAVDHME 236
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK-KSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ NQ PT F +K +SP +I Y +PYS+H
Sbjct: 237 ICHSAMLQ--WNQT----------HPTIAIFPTSRKIRSP-----HPSI--YSIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNND 711
S++EL+ FV + P ++P V
Sbjct: 278 SYSELRAFVAALRPCQVVPIVREQ 301
>gi|401402020|ref|XP_003881150.1| hypothetical protein NCLIV_041920 [Neospora caninum Liverpool]
gi|325115562|emb|CBZ51117.1| hypothetical protein NCLIV_041920 [Neospora caninum Liverpool]
Length = 234
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 111/230 (48%), Gaps = 44/230 (19%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVL 464
VD FK + +FL+HFH DHY GL+ S+ G +YCS++T
Sbjct: 25 VDTFKKVPRGSFVFFLSHFHADHYSGLSSSWSRGTVYCSVVT------------------ 66
Query: 465 PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPI 524
G+++ L + + GK LHTGDFR+ M L C I
Sbjct: 67 ----------------------GAVMFLCKTKGGKTYLHTGDFRYDRHMVDHPALANCHI 104
Query: 525 HTLILDTTYCNPLYDFPKQEAVIQFVI---EAIQAESFNP-KTLFLIGSYTIGKERLFLE 580
TL LDTTY P Y+F Q IQ I E + ++ P + LFL+GSYTIGKE++ L
Sbjct: 105 DTLFLDTTYAKPEYEFQPQADTIQHAINVAEELCKQNGQPGRVLFLVGSYTIGKEKIALA 164
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+++ K++ + + R+L CL + + + +S IH++PM T+
Sbjct: 165 LSQAFGWKVFASGKRRRILDCLQLEQLRDGRLSDDPADSCIHIVPMNTIG 214
>gi|255563435|ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223538070|gb|EEF39682.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 427
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 164/337 (48%), Gaps = 70/337 (20%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN-------------MKIGIPWDRLQVL 464
+FLTH H DH +GLT ++ G ++CS +TA L + IG+ W L V+
Sbjct: 18 YFLTHLHSDHTKGLTSAWARGPLFCSRLTANLFPARFPEFNLSLLCVLDIGV-WHSLSVV 76
Query: 465 -PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-----EMAS--- 515
P + T+ + V ++A+HCPG++++LF G +L+TGDFR+ ++ S
Sbjct: 77 SPSSGSQTV--LQVMPIDAHHCPGAVMLLFRGDFG-CLLYTGDFRWEATSERGKIGSNML 133
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
++ L+ + L LD TYCNP +DFP + + V++ I + +P +IG ++GKE
Sbjct: 134 LNALKDDSVDILYLDNTYCNPSFDFPPRHVAARQVVDIIAS---HPGHDIIIGIDSLGKE 190
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
L L ++R+L KI+V + + + L F DI FTT ++ + +P ++ S L
Sbjct: 191 DLLLHISRMLNIKIWVWPERLQTMHLLGF--HDI--FTTKTSQTRVRAVPRYSF-SINTL 245
Query: 636 KHMSNQYAGRFSLIVAFSPTG--WTF--SKGKKKSPG----RRWQQGTI----------- 676
+ ++ + + P+G W +KG G R++ G +
Sbjct: 246 EELNKMHP-----TIGIMPSGLPWVVKPTKGDDNLFGSFLTSRYKNGKLSANGGTGTDKL 300
Query: 677 ------------IRYEVPYSEHCSFTELKEFVKFVSP 701
Y VPYS+H F+E++EF++ V P
Sbjct: 301 NGSVQSVERLHQYIYSVPYSDHSCFSEIQEFIELVQP 337
>gi|146423725|ref|XP_001487788.1| hypothetical protein PGUG_01165 [Meyerozyma guilliermondii ATCC
6260]
Length = 736
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 178/461 (38%), Gaps = 146/461 (31%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSL-----------------IT 446
VDAF + S +FLTHFH DHY G+T+ + + +++ SL +T
Sbjct: 245 VDAFSFAPHESISQYFLTHFHADHYGGITKKWSYNRVFSSLEEYEDETKFRRIIYASEVT 304
Query: 447 ARLVNMKIGIPWDRLQVLPLNQK-----------------------TTIAGIDVTCLEAN 483
+RL+ ++ GI ++ L + + ++ G+ VT + AN
Sbjct: 305 SRLLTLRFGIDPRFIKDLKFDTRYCVKFYDDSGSPVDVQDGGYESNDSVPGLYVTPITAN 364
Query: 484 HCPGSIIILFEPQNGKA----VLHTGDFRFSEEMASMSVLQTCPIHT---------LILD 530
HCPG+ I LFE + +LH GDFR S + +L P H + LD
Sbjct: 365 HCPGAAIFLFESISRDLKVYRILHCGDFRVSNVILQHPLL--TPFHAVGGSRALDKVYLD 422
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQ-------------------------------AESF 559
TTY +P Y+FPKQE V + V ++
Sbjct: 423 TTYMDPKYNFPKQELVCETVANMFHRLVYAHASETKPLSNWLGILKQSRITDFMSSGKTK 482
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRK-KIYV-----NAAKFRVLKCLDFSKEDIQWFT 613
K L L+G+Y IGKE L + + + LR IYV + K +++ D E + +
Sbjct: 483 KKKFLILVGTYLIGKENLAIAILKKLRNCPIYVLCINSRSDKLDIIRTYD--NEYLSKYV 540
Query: 614 TNEHESH------IHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGKKK 665
TNE +H++PM + S + + N+Y F V PTGW+F + K +
Sbjct: 541 TNEDRGDEKCQCVVHLVPMNIVGSKGEISNYFTHNKYYDTFEQCVGLRPTGWSFQEKKTE 600
Query: 666 SPGR--------RWQQ----------GTIIR-------------------------YEVP 682
W+ TI Y +P
Sbjct: 601 GVNNDEVLEDYGDWETTINMPRAHAINTIADIMLEQPPYAFTDVAPSKTNKAPYNIYSLP 660
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
YSEH SF EL F F + IIP+VN S M ++
Sbjct: 661 YSEHSSFRELSYFGIFFNIGKIIPTVNTHNEWSIKRMDDII 701
>gi|358055743|dbj|GAA98088.1| hypothetical protein E5Q_04770 [Mixia osmundae IAM 14324]
Length = 979
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + + G P VDAF+Y ++G +FL+H H DHY L+ S++HG +Y S T L+
Sbjct: 421 PFYKVMEGMPIAVDAFRYGGIKG-IKAYFLSHAHADHYTNLSGSWNHGPVYASKTTCNLI 479
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-------------PQN 497
+G+ + + LP + T IAG+ VT ++ANHCPGS + LFE P
Sbjct: 480 VANLGVKPEYVHPLPFDTPTVIAGVTVTLIDANHCPGSCLFLFEAPHTDPKSPYSKTPSR 539
Query: 498 GKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE 557
LH GDFR S L I LDTTY NP Y FP QE V+ A+ +
Sbjct: 540 IFRYLHCGDFRASPVHIRHPALAGKRIDICYLDTTYLNPRYTFPAQEQVVD-ACAALIKQ 598
Query: 558 SFNPKTLFLIGSYTIGKERLFLEV 581
+ T L Y G++R EV
Sbjct: 599 RIDGDTTALRKGYQGGQQRAKQEV 622
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
L L+G+Y++GKE++F +A+ L K+Y N K ++ C+D E T + E+ +HV
Sbjct: 774 LVLVGTYSVGKEKIFKGIAQALGSKVYANEQKHKLFSCMD-DPELHAMLTKDPFEAQVHV 832
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF----SKGKKKSPGRRWQQGTII-- 677
++ + + L+ Q++ F+ I+ TGWTF ++ K S R +G++
Sbjct: 833 TNLFAIKR-ETLEEYLEQFSRYFTKIIGIRGTGWTFRPDATEEKMPSVARVVAKGSMPFT 891
Query: 678 ---------------RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Y VPYSEH SF EL F ++ II +VN
Sbjct: 892 PAYLYPQRDSTERYQAYGVPYSEHSSFYELTCFALSLNYTRIIATVN 938
>gi|332237717|ref|XP_003268053.1| PREDICTED: 5' exonuclease Apollo [Nomascus leucogenys]
Length = 531
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 154/323 (47%), Gaps = 36/323 (11%)
Query: 396 CCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ +
Sbjct: 4 VLIPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHL 62
Query: 455 GIPWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF 507
+ +Q L + + + + VT L+ANHCPGS++ LFE G +L+TGDF
Sbjct: 63 QVSKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDF 121
Query: 508 RFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
R++ M L IHTL LD T CNP P ++ +++ I+ +P+
Sbjct: 122 RYTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIK 178
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
IG Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 179 IGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDH 234
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
+ L+ NQ +A PT R+ + +PYS+H
Sbjct: 235 MEICHSNMLR--WNQTHP----TIAILPT------------SRKIHSSHPDIHVIPYSDH 276
Query: 687 CSFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 277 SSYSELRAFVAALKPCQVVPIVS 299
>gi|20804871|dbj|BAB92553.1| DNA cross-link repair 1B-like protein [Oryza sativa Japonica Group]
gi|125572255|gb|EAZ13770.1| hypothetical protein OsJ_03695 [Oryza sativa Japonica Group]
Length = 416
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 163/352 (46%), Gaps = 56/352 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRS--FHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL + + HG +YCS +TARL+ + G+ L
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVDASLL 64
Query: 462 QVLPLNQKTT----------IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF-- 509
+ L + + VT + A HCPGS++ LF G +L+TGDFR+
Sbjct: 65 RPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPGSLMYLFRGDLG-CMLYTGDFRWEL 123
Query: 510 ------SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
+ + A + L + L LD TYC+P FP + V + ++ I+A +P
Sbjct: 124 RCKRARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIVNIIRA---HPDH 180
Query: 564 LFLIGSYTIGKERLFLEVARVLRKK-IYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
+IG T+GKE L L ++R L+ K I+V + + + L ++ + FTT + I
Sbjct: 181 EIIIGVDTLGKEDLLLHISRALQTKVIWVWPQRLQTIHLLGID-DNQEIFTTQTSLTRIR 239
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS----PGRRWQ-----Q 673
+P ++L + + L + N ++ + P W SKGK KS P + + +
Sbjct: 240 AVPRYSL-TIESLDAL-NTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKSIRCKGLDE 297
Query: 674 GTI---------------IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
G I Y +PYSEH F EL+ F+ V P +I V+
Sbjct: 298 GAIEMDYDPLSPPKLFEKDSYSLPYSEHACFAELENFMLIVRPSTVIGIVST 349
>gi|449453656|ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
gi|449493187|ref|XP_004159216.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
Length = 428
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 158/331 (47%), Gaps = 52/331 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI-GIPWDRLQVLPLNQKTTIA--- 473
+FLTH H DH +GL+ + G ++CS +TA+ +K L+VL + +I+
Sbjct: 18 YFLTHLHSDHTKGLSSQWSKGPLFCSRLTAKFFPLKFPSFNLSLLRVLEIGLWHSISLVS 77
Query: 474 -------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF--------SEEMASMSV 518
I V ++A+HCPG++++LF G +L+TGDFR+ +A ++
Sbjct: 78 PSSGSRKVIKVVAIDAHHCPGAVMLLFRGDFG-CLLYTGDFRWEMSSERANKGRIALLNA 136
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
L+ + L LD TYCNP Y FP +E + +++ I + +P+ +IG ++GKE L
Sbjct: 137 LEDNTVDVLYLDNTYCNPSYAFPSREIAARQIVDIIAS---HPQHDIIIGVNSLGKEDLL 193
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW-----TLASFK 633
+ ++R+L K++V + + + L F+ E FTT + + + +P + TL
Sbjct: 194 VHISRMLGLKVWVWPERLQTMHLLGFNNE----FTTKTNLTRVRAVPRYSFSIDTLEGLN 249
Query: 634 RLKHMSNQYAGRFSLIV-----------AFSPTGWTFSKGKKKSPGRRWQQGTIIR---- 678
+++ +V + T + SK + P +Q +
Sbjct: 250 QMRPTIGIMPSGLPWVVRPHEGDGIPSGSLLITRYRQSKLNENGPFLIEKQTGKVESVTK 309
Query: 679 -----YEVPYSEHCSFTELKEFVKFVSPEHI 704
+ VPYS+H F+E++EF+K + P I
Sbjct: 310 LHKYIFSVPYSDHACFSEIQEFIKLICPTTI 340
>gi|47228753|emb|CAG07485.1| unnamed protein product [Tetraodon nigroviridis]
Length = 386
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/369 (30%), Positives = 170/369 (46%), Gaps = 83/369 (22%)
Query: 397 CVPGTPFRVDAFKYLRG--DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TP VD F ++R +FL+H H DH GLT ++ H IYCS ITA L+ +K+
Sbjct: 7 VIPRTPLAVD-FWHVRKCPGTRLFFLSHMHSDHTVGLTSTWSHRPIYCSAITAALLRLKL 65
Query: 455 GIP--W------DRLQVLPLNQ--KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ W D VLPL+ K T+ VT ++ANHCPGS++ LF+ G ++L+T
Sbjct: 66 QVKERWIHPLELDEPCVLPLDDIGKETMT---VTLMDANHCPGSVMFLFQGYFG-SILYT 121
Query: 505 ------------------------GDFRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYD 539
GDFR++ M L+T I L LD T C+P
Sbjct: 122 GQWDARTGLHLQLIFRNISNLFFAGDFRYTPSMLREPCLRTNITIDVLYLDDTNCDPNRS 181
Query: 540 FPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
P +++ Q + E I+ +P +IG Y +GKE L LE+A + I V+ + L
Sbjct: 182 IPSRQSATQQIKEIIRR---HPTHCVVIGLYALGKESLLLELAMEFKTWIEVSVDRMETL 238
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTL--ASFKRLKHMSNQYAGRFSL------IVA 651
K L+ D+ FTT+ I V+ + A+F H N+ ++ +V+
Sbjct: 239 KALELP--DV--FTTDPGAGRIRVVEQSEIRAAAF----HQWNKEEPTLAILPTSRPLVS 290
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
F P Y VPYS+H S+ EL++FV + P ++P V N
Sbjct: 291 FHPN----------------------IYVVPYSDHSSYQELEDFVSALQPTDVVPIVGNH 328
Query: 712 GRDSANAMV 720
S +A++
Sbjct: 329 IPGSLSALL 337
>gi|291398227|ref|XP_002715463.1| PREDICTED: DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae)
[Oryctolagus cuniculus]
Length = 538
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 155/321 (48%), Gaps = 38/321 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK--I 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRQRQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT L+A+HCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKKWIRALEVGESHVLPLDE-IGQETMTVTLLDAHHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L + IHTL LD T CNP P ++ +++ I+ +P+ I
Sbjct: 123 YTPSMLREPPLSSGKQIHTLYLDNTNCNPALVLPTRQEAAHQIVQLIRE---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L +A + + ++ + V++ L + D+ FT E IH +
Sbjct: 180 GLYSLGKESLLEHLALECQTWVVLSPQRLEVVQLLGLA--DV--FTVEEKAGRIHAVDNM 235
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ NQ +A PT R+ + +PYS+H
Sbjct: 236 EICHSAMLR--WNQTHP----TIAILPT------------SRKIHTSHPDIHIIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSV 708
S++EL+ FV + P ++P V
Sbjct: 278 SYSELRTFVSALKPSQVVPIV 298
>gi|355745555|gb|EHH50180.1| hypothetical protein EGM_00966 [Macaca fascicularis]
gi|380815684|gb|AFE79716.1| 5' exonuclease Apollo [Macaca mulatta]
gi|383414005|gb|AFH30216.1| 5' exonuclease Apollo [Macaca mulatta]
Length = 532
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 42/341 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 457 PWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+Q VLPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIQPLEIGESHVLPLDE-IGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ +++ I+ +P+ I
Sbjct: 123 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y +GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT R+ + +PYS+H
Sbjct: 233 ---GHMEICHSNMLRWNQTHPTIAILPT------------SRKIHSSHPDIHVIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDG----RDSANAMVSLLL 724
S++EL FV + P ++P V+ +DS + +S+ L
Sbjct: 278 SYSELCAFVAALKPCQVVPIVSRQPCGGFQDSLSPRISMPL 318
>gi|440798605|gb|ELR19672.1| DNA cross-link repair protein, putative [Acanthamoeba castellanii
str. Neff]
Length = 655
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 161/350 (46%), Gaps = 45/350 (12%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI 440
+D+ + + + T +P T VD FK +RG + +FLTHFH DHY GL++ + G +
Sbjct: 2 EDEEERAQAVGVATGVVLPNTRLAVDCFK-VRGAAA-YFLTHFHADHYAGLSKGWKGGPL 59
Query: 441 YCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA 500
YCS T RL+ K + ++ + A + V +A HCPGS++ LFE G
Sbjct: 60 YCSETTGRLLGHKFPALVE-AGLVHHDWLHYSAEVKVWLTDAGHCPGSVMFLFEGAFG-V 117
Query: 501 VLHTGDFRFSEEMASMSVLQTCP--IHTLILDTTYCNPLYD-FPK----------QEAVI 547
HTGDFRF+ M S V++ + L +DTT+C+P + FP QE I
Sbjct: 118 YFHTGDFRFNRGMLSCPVIKRAQGMVDKLFIDTTFCSPFWSAFPPKRWRSLTRTLQEQAI 177
Query: 548 QFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR-VLKCL-DFS 605
V++ I ++ N + + +G + + + VA + KI+V K R KC+ +
Sbjct: 178 AQVLQIISSQPHNVQV--YLECEMLGTQDVLVAVAEKFKTKIFVEDEKLRESFKCVPELK 235
Query: 606 KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA-----FSP-TGWTF 659
+ I F + ES H++ + +Y R +++ P T W
Sbjct: 236 RAKI--FAADPLESRFHLL-------------KNQRYTNRTEVLLEPDALYIRPSTQWFG 280
Query: 660 SKGKKKSPGRRWQQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIP 706
+G + +Q + V YS H SF EL+ FV F+ P ++P
Sbjct: 281 QQGNGRGNPALYQTRPCYAHGIWHVLYSIHSSFEELEVFVSFLQPRGLVP 330
>gi|402855732|ref|XP_003892469.1| PREDICTED: 5' exonuclease Apollo [Papio anubis]
Length = 532
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 42/341 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 457 PWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+Q VLPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIQPLEIGESHVLPLDE-IGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ +++ I+ +P+ I
Sbjct: 123 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y +GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT R+ + +PYS+H
Sbjct: 233 ---GHMEICHSNMLRWNQTHPTIAILPT------------SRKIHSSHPDIHVIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDG----RDSANAMVSLLL 724
S++EL FV + P ++P V+ +DS + +S+ L
Sbjct: 278 SYSELCAFVAALKPCQVVPIVSRQPCGGFQDSLSPRISMPL 318
>gi|109014448|ref|XP_001110949.1| PREDICTED: DNA cross-link repair 1B protein [Macaca mulatta]
gi|355558293|gb|EHH15073.1| hypothetical protein EGK_01115 [Macaca mulatta]
Length = 532
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 161/341 (47%), Gaps = 42/341 (12%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 457 PWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+Q VLPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIQPLEIGESHVLPLDE-IGRETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ +++ I+ +P+ I
Sbjct: 123 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKI 179
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y +GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 180 GLYNLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV--- 232
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ H + + +A PT R+ + +PYS+H
Sbjct: 233 ---GHMEICHSNMLRWNQTHPTIAILPT------------SRKIHSSHPDIHVIPYSDHS 277
Query: 688 SFTELKEFVKFVSPEHIIPSVNNDG----RDSANAMVSLLL 724
S++EL FV + P ++P V+ +DS + +S+ L
Sbjct: 278 SYSELCAFVAALKPCQVVPIVSRQPCGGFQDSLSPRISMPL 318
>gi|442570460|pdb|3ZDK|A Chain A, Crystal Structure Of Human 5' Exonuclease Apollo
Length = 336
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 156/322 (48%), Gaps = 38/322 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 7 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 65
Query: 457 PWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+Q VLPL++ + VT L+ANHCPGS++ LFE G +L+TGDFR
Sbjct: 66 SKQWIQALEVGESHVLPLDEIGQ-ETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFR 123
Query: 509 FSEEMASMSVLQTC-PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
++ M L IHTL LD T CNP P ++ +++ I+ +P+ I
Sbjct: 124 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKI 180
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 181 GLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDHM 236
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHC 687
+ L+ NQ +A PT R+ + +PYS+H
Sbjct: 237 EICHSNMLR--WNQTHP----TIAILPT------------SRKIHSSHPDIHVIPYSDHS 278
Query: 688 SFTELKEFVKFVSPEHIIPSVN 709
S++EL+ FV + P ++P V+
Sbjct: 279 SYSELRAFVAALKPCQVVPIVS 300
>gi|297664011|ref|XP_002810450.1| PREDICTED: 5' exonuclease Apollo [Pongo abelii]
Length = 532
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 151/321 (47%), Gaps = 36/321 (11%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ + +
Sbjct: 6 IPHTPIAVDFWSLRRAGTARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAHLLHRHLQV 64
Query: 457 PWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
+Q L + + + + VT L+ANHCPGS++ LFE G +L+TGDFR+
Sbjct: 65 SKQWIQALEVGESHVLPLDEIGQETMTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRY 123
Query: 510 SEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ M L IHTL LD T CNP P ++ +++ I+ +P+ IG
Sbjct: 124 TPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKIG 180
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
Y++GKE L ++A + + ++ + +++ L + D+ FT E IH +
Sbjct: 181 LYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDHME 236
Query: 629 LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCS 688
+ L+ +A PT R+ + +PYS+H S
Sbjct: 237 ICHSNMLRWNQTHPT------IAILPT------------SRKIHSSHPDIHVIPYSDHSS 278
Query: 689 FTELKEFVKFVSPEHIIPSVN 709
++EL FV + P ++P V+
Sbjct: 279 YSELCAFVAALKPCQVVPIVS 299
>gi|443916875|gb|ELU37809.1| ataxia telangiectasia mutated [Rhizoctonia solani AG-1 IA]
Length = 3918
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 175/451 (38%), Gaps = 141/451 (31%)
Query: 387 RKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS-- 443
+K K P + +PG P VDAF Y + + + +FL+H H DHY L+ S+ +G IYCS
Sbjct: 246 KKRKPAPFYKVMPGMPIAVDAFCYGKIPEVTAYFLSHAHSDHYTNLSSSWKNGPIYCSCE 305
Query: 444 ---------------LITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHC 485
+ TA L+ + + + LP NQ I G+ VT ++ NHC
Sbjct: 306 MDISVDSAGFNRLEAVTTANLIKHMLRVDSKWVNPLPDNQAVEIPDTGGVRVTLIDGNHC 365
Query: 486 PGSIIILF--------------EPQNGK----AVLHTGDFRFSEEMASMSVLQTCPIHTL 527
PGS + +F P G LH GDFR CP H L
Sbjct: 366 PGSSLFVFSGRQTIDAGDSPIKSPFVGSDRHFTYLHCGDFR------------ACPAHAL 413
Query: 528 ILDTTYCNPLYDFPKQEAVIQFVIE----------AIQAES------------------- 558
YC FP Q VI E AIQ ++
Sbjct: 414 ---HPYC-----FPPQTMVINACAELAKRYIQEDKAIQTKNGKQKSLPALLINPAGKGGW 465
Query: 559 FNPK---------------------------TLFLIGSYTIGKERLFLEVARVLRKKIYV 591
F P L ++G+YTIGKER+ +A+ L KIY
Sbjct: 466 FKPSPKMLAQTQSKALANTSPAGASGDLGRGVLVVVGTYTIGKERIVKAIAKSLSSKIYC 525
Query: 592 NAAKFRVLKC-LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
N+ K V C D + + T + + +HV+P+ + + + L ++ I+
Sbjct: 526 NSRKHAVFMCQADPTLHGM--LTKDPAAAQVHVLPLGQI-TIESLSEYLVLNQAQYDRIL 582
Query: 651 AFSPTGWTFSK--GKKKSP-----------------GRRWQQGT---IIRYEVPYSEHCS 688
F PTGWT++ G+ +P R Q+G+ + Y VPYSEH S
Sbjct: 583 GFRPTGWTYTPPVGQNIAPTIDQILSQAQAHEYTASDLRPQRGSNPRVTIYGVPYSEHSS 642
Query: 689 FTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
F EL F + +I +VN +S M
Sbjct: 643 FRELTCFALSIDWGRMIATVNVGSVESRQKM 673
>gi|190408363|gb|EDV11628.1| interstrand crosslink repair protein [Saccharomyces cerevisiae
RM11-1a]
Length = 371
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 152/343 (44%), Gaps = 92/343 (26%)
Query: 459 DRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEP-------QNGKAVLHTGDFRFS 510
D +Q+LP+N++ I I V L+ANHCPG+II+LF+ + + +LHTGDFR +
Sbjct: 2 DEIQILPMNKRFWITDTISVVTLDANHCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSN 61
Query: 511 EEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQ----EAVIQFVIEAIQ------ 555
+M ++ I + LDTTY Y+FP Q E V F + I+
Sbjct: 62 AKMIETIQKWLAETANETIDQVYLDTTYMTMGYNFPSQHSVCETVADFTLRLIKHGKNKT 121
Query: 556 ----------------AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV--NAAKFR 597
+ + LFL+G+YTIGKE+L +++ L+ K++V N+ KF
Sbjct: 122 FGDSQRNLFHFQRKKTLTTHRYRVLFLVGTYTIGKEKLAIKICEFLKTKLFVMPNSVKFS 181
Query: 598 VLKCLDFSKE------DIQWFTTNEHESHIHVMPMWTL-------ASFKRLKHMSNQYAG 644
++ + + E D T+N HES +H++P+ L A K LK + Y
Sbjct: 182 MMLTVLQNNENQNDMWDESLLTSNLHESSVHLVPIRVLKSQETIEAYLKSLKELETDYVK 241
Query: 645 RFSLIVAFSPTGWTFSKG----KKKSPGRRWQQG------------------------TI 676
+V F PTGW+ + G KK G +I
Sbjct: 242 DIEDVVGFIPTGWSHNFGLKYQKKNDDDENEMSGNTEYCLELMKNDRDNDDENGFEISSI 301
Query: 677 IR----------YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+R + VPYSEH SF +L +F + +IP+VN
Sbjct: 302 LRQYKKYNKFQVFNVPYSEHSSFNDLVKFGCKLKCSEVIPTVN 344
>gi|260837252|ref|XP_002613619.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae]
gi|229299005|gb|EEN69628.1| hypothetical protein BRAFLDRAFT_226963 [Branchiostoma floridae]
Length = 302
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/328 (30%), Positives = 152/328 (46%), Gaps = 48/328 (14%)
Query: 398 VPGTPFRVDAFKYLRGDCSH---WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI 454
+P TPF VD ++ + D + +FLTH H DH GL+ S+ H IYCS +TA+L+ K
Sbjct: 6 IPHTPFAVDFWRSRQCDLTGTRLFFLTHMHADHTSGLSPSWKH-PIYCSEVTAKLLICKF 64
Query: 455 GIPWDRLQ--------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
I ++ +LPL++ T + VT +ANHCPG+++ LF+ G ++ +TGD
Sbjct: 65 DITPALVRPLAVGESHILPLDE-TGQETMTVTVFDANHCPGAVMFLFQGYFG-SIFYTGD 122
Query: 507 FRFSEEMASMSVLQT-CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
FR+S EM VL I L LD TYC+P FP + Q +I+ I +
Sbjct: 123 FRYSPEMFDHEVLANRQSIDVLYLDNTYCSPECKFPSRTEATQ-MIKDIICRHPGHDIVL 181
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDF-----SKEDIQWFTTNEHESH 620
+ S +GKE + +E+A + + V + LK L+ +ED + + T +++
Sbjct: 182 GVSSNALGKEDMLVELAMTFQTWVVVTPQRLETLKLLELPNVFTDREDGRIWVTLKYQIT 241
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE 680
+ W S+ YAG G +
Sbjct: 242 RKNIERWNQERPTIAIIASSLYAG---------------------------LDGISHVHV 274
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSV 708
VPYS+H S+ EL EFV + P IIP V
Sbjct: 275 VPYSDHSSYRELHEFVSRLKPRSIIPVV 302
>gi|432866191|ref|XP_004070730.1| PREDICTED: 5' exonuclease Apollo-like [Oryzias latipes]
Length = 582
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 162/340 (47%), Gaps = 51/340 (15%)
Query: 398 VPGTPFRVDAFKYLRG--DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
+P TP VD F ++R +FL+H H DH GLT ++ IYCS +TA+L+++K+
Sbjct: 8 IPHTPLAVD-FWHVRKCPSARLFFLSHMHADHTVGLTSTWSGRPIYCSPVTAKLLHLKLK 66
Query: 456 IPWDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+ + L + ++ + + VT ++ANHCPG+++ LF+ G ++L+TGDFR
Sbjct: 67 VKEQWIHPLEIGEQNLLPLDDIGKETLTVTLIDANHCPGAVMFLFQGYFG-SILYTGDFR 125
Query: 509 FSEEMASMSVLQ-TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
+S M L+ I L LD T C+P P ++ Q + E I++ +P +I
Sbjct: 126 YSPSMLREPCLKNNITIDVLYLDDTNCDPNRTLPSRQKATQQIKEIIRS---HPDHNVVI 182
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G YT+GKE L LE+A+ + + V+ + LK L+ D+ FTT
Sbjct: 183 GLYTLGKESLLLELAKEFQTWVEVSYDRMETLKVLELP--DV--FTT------------- 225
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT--IIRYE----- 680
Q GRF ++ T + + P + +I Y
Sbjct: 226 ------------EQGTGRFRVVDHSEITSASLQDWNNEQPTLAILPTSRPLISYHPSVHV 273
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMV 720
VPYS+H S+ E+ +FV + P +IP V N S A+V
Sbjct: 274 VPYSDHSSYQEVVDFVSTLKPMSLIPIVRNHLPGSLLALV 313
>gi|406702005|gb|EKD05076.1| hypothetical protein A1Q2_00620 [Trichosporon asahii var. asahii
CBS 8904]
Length = 988
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 103/199 (51%), Gaps = 26/199 (13%)
Query: 373 SDRKKHAAKDQSKGRKHKD----IPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDH 427
+D K A+KD+ + ++ P + + G P VDAF Y + +FLTH H DH
Sbjct: 232 TDMWKEASKDEKRDANRRNGPRKAPFYKVLTGMPIAVDAFCYGAVPKVTAYFLTHAHADH 291
Query: 428 YQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
Y L++++ HG IYCS TA L+ +K+G+ +R V+P T G+ VT L+ANHCPG
Sbjct: 292 YTALSKAWRHGPIYCSETTANLIVLKLGV--ERHWVVPFVIPNT-GGVTVTSLDANHCPG 348
Query: 488 SIIILFE--------------PQNGK----AVLHTGDFRFSEEMASMSVLQTCPIHTLIL 529
S + LFE P G LH GDFR S + + P+ T+ L
Sbjct: 349 SNVFLFEGRQTVDAGDTTFKSPMVGSNRIFRYLHCGDFRASPKHVLHPAVACKPLDTIYL 408
Query: 530 DTTYCNPLYDFPKQEAVIQ 548
DTTY NP Y FP Q VI+
Sbjct: 409 DTTYLNPSYCFPPQPLVIE 427
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+TL LIG+Y+IGKER+ +A+ + KIY N K ++LKC D E T+ E I
Sbjct: 608 RTLILIGTYSIGKERIVKGIAKAIGAKIYCNPRKTQILKCED-DPELHDLMGTDPIECQI 666
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK------------KKSPGR 669
H++P+ + + L+ F+ I+AF PTGWTFS K+ R
Sbjct: 667 HLVPLSNI-TLDNLEEYLATMHPHFNRILAFRPTGWTFSGPSAANSLPDVNFIIKRDQAR 725
Query: 670 RWQQGTI----------IRYEVPYSEHCSFTELKEFVKFV-SPEHIIPSVN 709
+ ++ + + VPYSEH SF EL F V II +VN
Sbjct: 726 GFSDVSLKPIRGSCRKYMMFGVPYSEHSSFFELTCFALSVPGTPKIIATVN 776
>gi|344228830|gb|EGV60716.1| hypothetical protein CANTEDRAFT_110531 [Candida tenuis ATCC 10573]
Length = 555
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/444 (27%), Positives = 177/444 (39%), Gaps = 139/444 (31%)
Query: 405 VDAFKYLRG-DCSHWFLTHFHMDHYQGLTR-----------------SFHHGKIYCSLIT 446
+DAF Y + +FL+HFH DHY G+++ S + IYCS T
Sbjct: 56 MDAFNYSPDPEMEIYFLSHFHADHYGGISKKWCYERVFESVDDFKDESMYRPLIYCSKTT 115
Query: 447 ARLVNMKIGIPWDRLQVL---------------PLNQKTT---IAGIDVTCLEANHCPGS 488
L+ +K GI ++ L P +K + I GI VT +EANHCPGS
Sbjct: 116 GNLLTLKFGIDPRFIESLEFDVLYRVMRFDSMSPAFEKVSEMDIEGIYVTMMEANHCPGS 175
Query: 489 IIILFEPQN----GKAVLHTGDFRFSEEMASMSVLQ--TCPIHTLILDTTYCNPLY---- 538
I LFE ++ K LH GDFR +++M L+ T P T +LD Y + Y
Sbjct: 176 GIFLFESKSTMASSKKYLHCGDFRVNKQMIQHKSLERFTLPNSTDVLDKVYLDTTYLSFQ 235
Query: 539 -DFPKQEAVIQFVIE-----------AIQAESFN------------------PKTLFLIG 568
FPKQ+ V + + E F K L L+G
Sbjct: 236 RRFPKQDLVCSEAAQLFHDLCQGNKPGLMTECFGLGRQSRITEFGSKSSKPKKKFLILVG 295
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT---------TNEHES 619
Y IGKERL + +++ + IYV+ AK R +I++F + +
Sbjct: 296 KYIIGKERLAIAISKKINCPIYVSNAKSRGNHAEVVDACEIEYFKDHIIKNDLGDDSSDC 355
Query: 620 HIHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ---- 673
IH++ M + + + + + N+Y F +A PTGW S +S G R++Q
Sbjct: 356 IIHLVSMEVVEALENVSNYFKHNKYHEHFERCIALRPTGW--SHAYDESTGFRFEQFEST 413
Query: 674 -----------------------GTIIRYEV-----------------------PYSEHC 687
T Y++ PYSEH
Sbjct: 414 DPINTSAENLNNGLSQICETCFNDTPFSYQIPIDAKKAFNKGQSKRNDLRIYSFPYSEHS 473
Query: 688 SFTELKEFVKFVSPEHIIPSVNND 711
S+ EL FV F++ + IIP+VN D
Sbjct: 474 SYRELTYFVLFLNIDQIIPTVNQD 497
>gi|218189175|gb|EEC71602.1| hypothetical protein OsI_03999 [Oryza sativa Indica Group]
Length = 432
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 162/352 (46%), Gaps = 56/352 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRS--FHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL + + HG +YCS +TAR + + G+ L
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARPLPTRFPGVDASLL 64
Query: 462 QVLPLNQKTT----------IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF-- 509
+ L + + VT + A HCPGS++ LF G +L+TGDFR+
Sbjct: 65 RPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPGSLMYLFRGDLG-CMLYTGDFRWEL 123
Query: 510 ------SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
+ + A + L + L LD TYC+P FP + V + ++ ++A +P
Sbjct: 124 RCERARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQIVNIVRA---HPDH 180
Query: 564 LFLIGSYTIGKERLFLEVARVLRKK-IYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
+IG T+GKE L L ++R L+ K I+V + + L ++ + FTT + I
Sbjct: 181 EIIIGVDTLGKEDLLLHISRALQTKVIWVWPQRLQTTHLLGID-DNQEIFTTQTSLTRIR 239
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS----PGRRWQ-----Q 673
+P ++L + + L + N ++ + P W SKGK KS P + + +
Sbjct: 240 AVPRYSL-TIESLDAL-NTVCPTIGIMPSGIPWLWKNSKGKAKSGVKSPAKSIRCKGLDE 297
Query: 674 GTI---------------IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
G I Y +PYSEH F EL++F+ V P +I V+
Sbjct: 298 GAIEMDYDPLSPPKLFEKDSYSLPYSEHACFAELEDFMLTVRPSTVIGIVST 349
>gi|320168671|gb|EFW45570.1| DNA cross-link repair protein 1B [Capsaspora owczarzaki ATCC 30864]
Length = 729
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 127/247 (51%), Gaps = 29/247 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+P TP +D ++ +FL+H H DH QGL+ S+ G IYCS +T L+ K G+
Sbjct: 6 IPNTPIALDCWRPPPA-IKIFFLSHLHADHTQGLSPSWRQGTIYCSPVTRLLLLHKFGVD 64
Query: 458 WDRLQVLPLNQKTTIA-------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
++ L L++ T + + VT +ANHCPG+++ L E G VL+TGDFRF
Sbjct: 65 ASLVETLELDEPTVVPLDPEGAETMTVTAFDANHCPGAVMFLLEGYFGN-VLYTGDFRFC 123
Query: 511 EEM--ASMSVL-----------QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE 557
+ S+L + + L LD TYC+P + FP +EA + V++ I+
Sbjct: 124 PALIHPEDSLLGARLAGGAHGGRRLNVDVLYLDNTYCDPKFAFPTREAGVDAVVDIIEQ- 182
Query: 558 SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEH 617
+P +IG T+GKE L VA L+ I V+ ++ L+ + D+ FT+N
Sbjct: 183 --HPDHRVMIGIDTLGKEELLEAVALRLQTWIVVSQSRLNALQLI--GARDV--FTSNPT 236
Query: 618 ESHIHVM 624
+S I V+
Sbjct: 237 DSRIWVV 243
>gi|340372739|ref|XP_003384901.1| PREDICTED: 5' exonuclease Apollo-like [Amphimedon queenslandica]
Length = 540
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 151/322 (46%), Gaps = 30/322 (9%)
Query: 398 VPGTPFRVDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD F + +FLTH H DH GL SF IYC+ +T +LV + I I
Sbjct: 14 IPYTPIAVDYFHRPSLPARTLFFLTHSHADHLYGLDSSFDQ-TIYCTSLTKQLVLLHISI 72
Query: 457 PWDRLQVLPLNQKTTI-------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
D L L ++ + I VT +++ HCPGS + LFE G +LHTGDFR
Sbjct: 73 DPDLLVELEFDEPRQLQVDCPGNVFISVTTIDSCHCPGSAMFLFEGYFG-TILHTGDFRL 131
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
S ++ + +L+ L LD TY +P++DFP++ V++ ++ NP I
Sbjct: 132 SPKLLAHPLLKNLEPDVLYLDNTYNDPIFDFPERSVTCDKVVKLVKD---NPHLRTFIAF 188
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
+GKE L + + R I V++ +++ ++ L + + + + V+P + +
Sbjct: 189 NKLGKEDLLVNIVRSTDYAIGVSSEQYKKMEILGLH----HVCSLDSDQCQVIVVPFYAV 244
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
N++ V + + S + P + + I++ YS+HCS+
Sbjct: 245 TEAN-----VNRWINECPTQVIIPTSRFEGS----EHPLKAYPCVHIVQ----YSDHCSY 291
Query: 690 TELKEFVKFVSPEHIIPSVNND 711
EL +FV+ V P I P V D
Sbjct: 292 KELYQFVELVKPVSIHPVVQRD 313
>gi|242058925|ref|XP_002458608.1| hypothetical protein SORBIDRAFT_03g036570 [Sorghum bicolor]
gi|241930583|gb|EES03728.1| hypothetical protein SORBIDRAFT_03g036570 [Sorghum bicolor]
Length = 401
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 157/328 (47%), Gaps = 44/328 (13%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRS--FHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL + + HG +YCS TARL+ + GI D
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPTTARLLPSRFPGI--DAS 62
Query: 462 QVLPLNQKTTIA-----------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ PL + + + VT + A HCPGS++ LF G +L+TGDFR+
Sbjct: 63 LIRPLAPGASASISLSSPSGQPLSVRVTAIPALHCPGSLMYLFRGDLG-CMLYTGDFRWE 121
Query: 511 --------EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK 562
+ A + L I L LD TYC+P +FP + V + +++ I+A +P
Sbjct: 122 LGCDKARRAKQALLDALGGDTIDVLYLDNTYCHPSLNFPSRPVVAEHMVDIIRA---HPD 178
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH 622
+IG T+GKE L L ++R L+ KI+V + + L E+ + FTT + I
Sbjct: 179 HEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLLTIHLLGID-ENREIFTTQTSLTRIR 237
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVP 682
+P +++ + L+ + N ++ + P W S+GK KS GR +
Sbjct: 238 AVPRYSV-TIDNLEAL-NTVCPTIGIMPSGIPWLWKSSEGKVKSKGRSSLK--------- 286
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSVNN 710
S C EL++F+ + P +I V++
Sbjct: 287 -SIGCLGRELEDFMHTMHPSTVIGIVSS 313
>gi|260947898|ref|XP_002618246.1| hypothetical protein CLUG_01705 [Clavispora lusitaniae ATCC 42720]
gi|238848118|gb|EEQ37582.1| hypothetical protein CLUG_01705 [Clavispora lusitaniae ATCC 42720]
Length = 623
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 172/465 (36%), Gaps = 145/465 (31%)
Query: 400 GTPFRVDAFKYL-RGDCSHWFLTHFHMDHYQGLT------RSFHHGKIYCSLITARLVNM 452
G VDAF Y +FL+HFH DHY G T R+ +YCS ITARL+ +
Sbjct: 129 GHDVAVDAFCYQPHNTILQYFLSHFHSDHYGGFTKRWCRERTLDKKIVYCSEITARLLQI 188
Query: 453 KIGIPWDRLQVLPLNQKTTI---------------------------------------- 472
+ + + L LN + +
Sbjct: 189 RFNVEEQFIFPLKLNARCKVWDYGHAVNVCSGDKTYDNNGSRSAFEEGYMLNGGFYSEEK 248
Query: 473 -AGIDVTCLEANHCPGSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVLQTCPIHT- 526
G+ VT ++ANHCPG++I LFE LH GDFR M ++ P H
Sbjct: 249 TPGLYVTSIDANHCPGAVIFLFESISLSMESSFSLHCGDFRVCRAMLEHPMI--LPFHIG 306
Query: 527 -------LILDTTYCNPLYDFPKQEAVIQFVIEAIQA---------ESFNP--------- 561
LDTTY +P ++FP QE V ++ E F
Sbjct: 307 GSSVLDKAYLDTTYMSPEHNFPLQETVCDAAATLVEKFAEKGPLYNEYFGTTLQSRITDF 366
Query: 562 ---------KTLFLIGSYTIGKERLFLEVARVLRK-KIYVNAAKFRVLK----------C 601
K L L+G+Y IGKE+L + +++ + IYV+ R K
Sbjct: 367 LQLPRMKKKKFLILVGTYLIGKEKLAISISKRMDSCPIYVSNINSRGDKKEIIASFQNDF 426
Query: 602 LD--FSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGW 657
LD + +D+ +++ E IH++PM + S K + NQY F + F PTGW
Sbjct: 427 LDSVLTDDDVGKYSSAE--VMIHLVPMKIVGSPKEISSYFNHNQYFNHFERCIGFRPTGW 484
Query: 658 TFS---------------------------------------KGKKKSPGRRWQQGTIIR 678
F K K+ + + T
Sbjct: 485 AFEGTSDFLELEDEKPYAEDASFQDMIEALKNRPNYTYLDILKQKRPQSDKLMDKPTFKI 544
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
Y +PYSEH SF EL F ++ IIP+VN S M S++
Sbjct: 545 YSLPYSEHSSFRELSFFALMLNISEIIPTVNTGNEFSRAKMESII 589
>gi|453089242|gb|EMF17282.1| DRMBL-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 911
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/188 (39%), Positives = 102/188 (54%), Gaps = 31/188 (16%)
Query: 389 HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ P + +PG VDAF+Y ++G C +FL+HFH DHY GLT ++ HG IYCS +T
Sbjct: 441 QRTCPFYKILPGLFICVDAFRYGAVQG-CQAYFLSHFHSDHYIGLTSTWTHGPIYCSKVT 499
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFE-----PQ 496
A LV ++ + D + V+PL + + G+ VT + ANHCPGS + LFE Q
Sbjct: 500 ANLVKQQLRV--DPIYVVPLEFEQQVEVPGTRGVKVTMISANHCPGSSLYLFEKTLGVKQ 557
Query: 497 NGKA----VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDF 540
NG+A +LH GDFR + +L + I LDTTY NP Y F
Sbjct: 558 NGEARAQRILHCGDFRACKMHIEHPLLMPDVLDKVSGKTKEQKIDVCYLDTTYLNPKYAF 617
Query: 541 PKQEAVIQ 548
P QE+VI+
Sbjct: 618 PDQESVIK 625
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 26/186 (13%)
Query: 548 QFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
Q +I +++ + + L ++G+Y+IGKER+ L +AR L KIY +K R++ L+ ++
Sbjct: 693 QQIISSLKDKKARGRLLVVVGTYSIGKERICLGIARALNSKIYAPPSKQRIVAALEDAEL 752
Query: 608 DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK-- 665
+ + T + E+ +H+ P++ + + L + F+ V F P+GW + K +
Sbjct: 753 EAR-MTKDPKEAQVHMTPLFEIRA-DTLDDYLKDFWPHFTRAVGFRPSGWNYKPPKSRFT 810
Query: 666 -SP-------GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEH 703
SP W Q+G+ R + VPYSEH SF EL F + +
Sbjct: 811 DSPLVSTVLQSDNWKSTYSMRELVPQRGSSSRASCFGVPYSEHSSFRELTVFCCALRIDK 870
Query: 704 IIPSVN 709
IIP+VN
Sbjct: 871 IIPTVN 876
>gi|300708505|ref|XP_002996430.1| hypothetical protein NCER_100477 [Nosema ceranae BRL01]
gi|239605732|gb|EEQ82759.1| hypothetical protein NCER_100477 [Nosema ceranae BRL01]
Length = 443
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 20/221 (9%)
Query: 392 IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
IP++ + T + VD F + SH+FL+HFH DHY GL +SF + IYCS+ TA L+
Sbjct: 26 IPSYKRISFTNYVVDCFYIDIKNASHYFLSHFHSDHYYGLKKSFSYP-IYCSITTANLIE 84
Query: 452 MKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+K + + +PL G V+ ++A+HCPG++ +F NG VLHTGDFR
Sbjct: 85 LKY-----KCKTMPLENNKNYCLEDGNIVSLIDAHHCPGAVCFIFYV-NGAFVLHTGDFR 138
Query: 509 FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTL---- 564
+ + L T+ LD T+ FP QE VI V++ ++ N L
Sbjct: 139 CTYDFTLQ--LMKYKFTTIFLDNTF-EGKKPFPSQEDVIHRVLDIMRNNK-NKNCLVPIN 194
Query: 565 --FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLD 603
+L +Y IGKE++FL A I + KF+V KC D
Sbjct: 195 YKYLFCTYMIGKEKIFLCAAEFFDMSIKIEPDKFKVYKCYD 235
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW---TFSKGKKKSPG 668
TT E+ + V+ + + K + N A R + F TGW T S KS G
Sbjct: 338 LTTETKENQLLVISTQHIEKKRLHKILDNVKADR---VTVFCGTGWHDKTVSFDWCKSDG 394
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
R+ ++G I + VPYSEH S EL F K ++ + II +V N R+
Sbjct: 395 RKTKKGVEIIH-VPYSEHSSSAELDYFKKHMNYDLIINTVKNKSRN 439
>gi|300121917|emb|CBK22491.2| unnamed protein product [Blastocystis hominis]
Length = 468
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 129/464 (27%), Positives = 199/464 (42%), Gaps = 96/464 (20%)
Query: 319 SERHKEASKVIVDGSSKPAANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKH 378
S R ++ +VD SK L++ +F S+++ +T ++ Q S S +K
Sbjct: 19 SFRMVHVNQCLVDSESKKTKRNLVSQYFTKSVSSSD--ATESDSQMSLSPLSSSSVKKIK 76
Query: 379 AAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
K QS ++ P+ +P T F D F R CS F +HFH DH QGLT+ F G
Sbjct: 77 TKKWQSVPQRQN--PS-ARIPHTLFLRDFF---RSGCSV-FFSHFHTDHMQGLTKKFI-G 128
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVL------------------------------PLNQ 468
I+ + T LV K I L L PLN
Sbjct: 129 DIFATPTTCNLVANKFQIDRHHLHPLRIGEHYYLTNCKTQHIPAVMEWIHREDPSYPLNS 188
Query: 469 KTTIAG------------IDVTCLEANHCPGSIIILF---------EPQNGK-----AVL 502
+ I + V ++ANHCPGS + LF +P VL
Sbjct: 189 TSLILNENVSDSALQTRLVRVDVIDANHCPGSCMFLFSLFDWNETTDPHKPSFHLFYRVL 248
Query: 503 HTGDFRFSEEMASMSVLQTCP------IHTLILDTTYCNPLYDFPKQEAVIQ---FVIEA 553
+TGDFRF M +L+ + L++D TY N Y+FP+Q+ V+ +V++
Sbjct: 249 YTGDFRFESRMLDDGILRRFSDNRGESLDLLMVDNTYNNEAYNFPRQQCVVNTAAWVLDR 308
Query: 554 IQAESFNPKT--LFLIGSYTIGKERLFLEVARVLR-KKIYVNAAKFRVLKCLDFSKEDIQ 610
+ + + + LI SY++GKE L+L +A+ + K R+ +F Q
Sbjct: 309 FWRDGLHRGSDLVVLIESYSVGKENLWLHLAKTFDLPSVRKRERKARIACYEEFESVYKQ 368
Query: 611 WFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK-GKKKSPG- 668
TT + ++ P+W + +L + A +F +V SPTGWT+ + KKK P
Sbjct: 369 HITTEKTDT-----PLWVGMARGKLFRDPAETA-QFQRVVVLSPTGWTWEEVSKKKKPDD 422
Query: 669 --------RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
RR +G I +PYSEH S EL EF++ ++ + I
Sbjct: 423 PELCAYSFRR--KGNRITIGLPYSEHSSCDELDEFLERLNYKEI 464
>gi|403167204|ref|XP_003327017.2| hypothetical protein PGTG_08794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375166911|gb|EFP82598.2| hypothetical protein PGTG_08794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 797
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 94/182 (51%), Gaps = 8/182 (4%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G K +P + +PGT VD F + + G S +FL+H H DHY L+ S+ HGKIYCS
Sbjct: 247 GAGKKAVPFYKLMPGTTISVDCFSHGPVPG-VSAYFLSHAHSDHYTKLSSSWKHGKIYCS 305
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE-----PQNG 498
TA LV +K+ + + L N T+ + V ++ANHCPGS + LFE +
Sbjct: 306 KTTANLVKLKLRVDSHWIVPLDFNTPYTVDDVRVVLIDANHCPGSAMFLFEGITKPDRKP 365
Query: 499 KAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAES 558
LH GDFR + + I LDTTY +P Y FP Q+ VIQ +AI A
Sbjct: 366 FRYLHCGDFRATPAQLRHPAIHEKVIDICYLDTTYLDPKYSFPAQDQVIQGCCKAIGARV 425
Query: 559 FN 560
+
Sbjct: 426 LD 427
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 525 HTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK------------------TLFL 566
H+ +T PL PK+E V + V A E PK +L L
Sbjct: 459 HSASSSSTTLGPL---PKKEGVPEQVAGASGEEPKQPKLASIFEPKDQTSTNEKRKSLIL 515
Query: 567 IGSYTIGKERLFLEVARVLRKKIY-VNAAKFRVLKCLDFSKEDIQ---WFTTNEHESHIH 622
IG+Y+IGKER+ +EVA+ L K++ +A K ++ +D + E+ + + + + IH
Sbjct: 516 IGTYSIGKERIVIEVAKKLGSKVFCADARKTGIIGAIDRADEEAELQGLLSADPLRAQIH 575
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
++ ++ L L+ +++ RF+ I+ PTGW +
Sbjct: 576 LVNLFALNKPGFLEAYLHKFRPRFNHIIGIKPTGWCY 612
>gi|350296124|gb|EGZ77101.1| hypothetical protein NEUTE2DRAFT_99556 [Neurospora tetrasperma FGSC
2509]
Length = 956
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +P VDAF+Y ++G C +FL+HFH DHY GL+ S+ HG IYCS +T LV
Sbjct: 502 PFYKIMPNFSICVDAFRYGAVQG-CKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLV 560
Query: 451 NMKIGIPWDRLQVLPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKA-----V 501
M++ + L + + + VT +EANHCPGS + LFE + GK +
Sbjct: 561 KMQLRTAAKYVVELEFGETVPVPETGGAVMVTMIEANHCPGSSLFLFEKKVGKEGRIQRI 620
Query: 502 LHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFPKQEAVIQF 549
LH GDFR +L + I LDTTY NP Y FP QE VIQ
Sbjct: 621 LHCGDFRACPAHVEHPLLKPETLDKVTGKTKQQKIDVCYLDTTYLNPRYSFPPQEDVIQA 680
Query: 550 VIE 552
E
Sbjct: 681 CAE 683
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 11/103 (10%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+ L + G+Y+IGKER+ + +A+ LR KI+ + +K R+ K LD E T + E+ +
Sbjct: 770 RLLVVCGTYSIGKERICVAIAQALRSKIFASPSKIRITKQLD-DPELSSLMTADPREAQV 828
Query: 622 HVMPMW-----TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
H+ + TLA + L H SN FS IV F P+GW++
Sbjct: 829 HMQALGEIRADTLAEYLEL-HRSNG----FSRIVGFRPSGWSY 866
>gi|452847871|gb|EME49803.1| hypothetical protein DOTSEDRAFT_40954 [Dothistroma septosporum
NZE10]
Length = 849
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 98/186 (52%), Gaps = 35/186 (18%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y + G C +FL+HFH DHY GLT ++ HG IYCS +TA LV
Sbjct: 384 PFYKILPGLSICVDAFRYGAVEG-CKAYFLSHFHSDHYVGLTSTWSHGPIYCSKVTANLV 442
Query: 451 NMKIGIPWDRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKA----- 500
++ + D V+PL+ + + G+ VT + ANHCPGS + LFE GK
Sbjct: 443 RQQLRV--DPKYVVPLDFEASFEVPGTRGVKVTMISANHCPGSSLYLFEKVVGKKQSGEP 500
Query: 501 ----VLHTGDFR--------------FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPK 542
+LH GDFR +++A + Q I LDTTY NP Y FP
Sbjct: 501 RSQRILHCGDFRACRMHVEHPLLMPHVRDKLAGTTREQK--IDVCYLDTTYLNPKYAFPS 558
Query: 543 QEAVIQ 548
QE VI+
Sbjct: 559 QEVVIK 564
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 93/186 (50%), Gaps = 26/186 (13%)
Query: 548 QFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
Q ++ ++ + + L ++G+Y+IGKER+ L +A+ LR KIY A+K R++ L+ +
Sbjct: 631 QQILSSMTDQKTRGRLLVVVGTYSIGKERIALGIAKALRSKIYAPASKQRIVAALEDPEL 690
Query: 608 DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK-- 665
D + T + E+ +H+ P++ + + + L + F+ V F P+GW + +
Sbjct: 691 DAR-MTNDPREAQVHLTPLFEIRA-ETLDDYLKDFFPHFTRAVGFRPSGWNYRPPNSRFT 748
Query: 666 -SP-------GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEH 703
SP W Q+G+ R + VPYSEH SF EL F + +
Sbjct: 749 DSPLVQTVLHSDNWKSTYSMKELTPQRGSSSRASCFGVPYSEHSSFRELTMFCCALRIDK 808
Query: 704 IIPSVN 709
IIP+VN
Sbjct: 809 IIPTVN 814
>gi|164424300|ref|XP_958874.2| hypothetical protein NCU07381 [Neurospora crassa OR74A]
gi|157070457|gb|EAA29638.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 955
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 92/183 (50%), Gaps = 24/183 (13%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +P VDAF+Y ++G C +FL+HFH DHY GL+ S+ HG IYCS +T LV
Sbjct: 502 PFYKIMPNFSICVDAFRYGAVQG-CKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLV 560
Query: 451 NMKIGIPWDRLQVLPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKA-----V 501
M++ + L + + + VT +EANHCPGS + LFE + GK +
Sbjct: 561 KMQLRTAAKYVVELEFGETVPVPETGGAVMVTMIEANHCPGSSLFLFEKKVGKEGRIQRI 620
Query: 502 LHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFPKQEAVIQF 549
LH GDFR +L + I LDTTY NP Y FP QE VIQ
Sbjct: 621 LHCGDFRACPAHVEHPLLKPETLDKVTGKTKQQKIDVCYLDTTYLNPRYSFPPQEDVIQA 680
Query: 550 VIE 552
E
Sbjct: 681 CAE 683
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 11/106 (10%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+ L + G+Y+IGKER+ + +A+ LR KI+ + +K R+ K LD E T + E+ +
Sbjct: 770 RLLVVCGTYSIGKERICVAIAQALRSKIFASPSKIRITKQLD-DPELSSLMTADPREAQV 828
Query: 622 HVMPMW-----TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKG 662
H+ + TLA + L H SN FS IV F P+GW++ G
Sbjct: 829 HMQALGEIRADTLAEYLEL-HRSNG----FSRIVGFRPSGWSYRPG 869
>gi|403366058|gb|EJY82820.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 592
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 35/247 (14%)
Query: 474 GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL------------QT 521
G+ V ++A HCPG+++ LF + G V HTGDFRFSE+M +L +
Sbjct: 16 GVSVMMMDAFHCPGAVMFLFRGKMG-TVFHTGDFRFSEQMFDNEILFPPSKRNPQMKQIS 74
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
I L LD T+ +P YDFP +E + + + I+ S +FL SY +GKE +F+ +
Sbjct: 75 VDIDYLFLDNTFADPEYDFPSREEAYKSLTDTIK--SHKDHRIFLF-SYNLGKEEVFVNL 131
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
A+ + V+ +FR L +D + FTT+E + IH+ + L F K N+
Sbjct: 132 AQDFETLVVVDEDRFRKLSIMDLRPD---LFTTDEKQGWIHIKSIRELKKFDIEK--CNE 186
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
+I+ TGW ++ + ++VPYS H ++ E++ FVK + P
Sbjct: 187 EEPTIFIIM----TGW----------NDKYNRNLPYYFKVPYSSHSNYREIERFVKAMMP 232
Query: 702 EHIIPSV 708
++++ +V
Sbjct: 233 KNLVFNV 239
>gi|402218716|gb|EJT98792.1| DRMBL-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 648
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 96/194 (49%), Gaps = 22/194 (11%)
Query: 376 KKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRS 434
++H + G + P + + G P VDAF+Y + + + LTH H DHY L+ S
Sbjct: 149 EQHEVRGPRSGAGRRKAPFYKVMQGMPIAVDAFRYGKIPGVTAYCLTHAHSDHYTNLSSS 208
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIII 491
+ HG IYCS TA L+ + + + + + LPLN TT+ G+ V LEANHCPGS++
Sbjct: 209 WKHGPIYCSSTTANLIKLNLSVAPEYVHPLPLNTPTTLPNTGGVQVILLEANHCPGSVLF 268
Query: 492 LF----------EPQNGKAV--------LHTGDFRFSEEMASMSVLQTCPIHTLILDTTY 533
LF P + V LH GDFR A ++ + + LDTTY
Sbjct: 269 LFIGRQTVNAGDSPISSPFVGSQRTFRYLHCGDFRACPAHALHPEIKGKKLDLVYLDTTY 328
Query: 534 CNPLYDFPKQEAVI 547
NP Y FP Q V+
Sbjct: 329 LNPRYCFPPQRQVV 342
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
KTL IG+Y+IGKER+ +A L KIY +A K +L D E TT+ + +
Sbjct: 441 KTLVAIGTYSIGKERIVKAIALALGSKIYCDARKRGLLLAQD-DPELHSLLTTDPYSCQV 499
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF----------------SKGKKK 665
H++P+ ++ + R++ Q+ G F ++ F PTGWT+ + +K+
Sbjct: 500 HLLPLQSI-TVDRMQDYLEQFKGLFDRVLGFRPTGWTYVPPAGMDVMPDVSRVIVRDQKR 558
Query: 666 -------SPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANA 718
P R Q ++ Y VPYSEH SF EL F V II +VN S
Sbjct: 559 VFDETALKPTRAASQKYML-YGVPYSEHSSFFELTCFALSVDVGKIIATVNVHSASSRGK 617
Query: 719 M 719
M
Sbjct: 618 M 618
>gi|302414560|ref|XP_003005112.1| DNA cross-link repair protein pso2/snm1 [Verticillium albo-atrum
VaMs.102]
gi|261356181|gb|EEY18609.1| DNA cross-link repair protein pso2/snm1 [Verticillium albo-atrum
VaMs.102]
Length = 896
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 155/392 (39%), Gaps = 88/392 (22%)
Query: 354 KKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--L 411
KK S T SG +S + ++ + K + P + +PG VDAF+Y +
Sbjct: 382 KKSSAFTQLMSGHAESAAWANAAAADKASRGKAAYERTCPFYKIMPGFNICVDAFRYGAV 441
Query: 412 RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTT 471
+G C +FL+HFH DHY GLT + HG IYCS +T L M++ + + L +
Sbjct: 442 KG-CQAYFLSHFHSDHYIGLTAHWTHGPIYCSKVTGDLCIMQLKVAPKWIVALDFEETVE 500
Query: 472 I---AGIDVTCLEANHCPGSIIILFEPQNGKAV-------LHTGDFRFSE---------- 511
+ G+ VT + ANHCPGS + LFE +GK LH GDFR
Sbjct: 501 VPGTGGVMVTMIPANHCPGSSLFLFEKPHGKGANVKKQRYLHCGDFRACPAHVEHPLLKP 560
Query: 512 --EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK------- 562
+ A L+ I LDTTY NP Y FP QE VI+ + S +P
Sbjct: 561 DVQDAITGKLKQQRIDLCYLDTTYLNPRYSFPPQEDVIRTCADVCAGISPDPNCTTDIWD 620
Query: 563 -----------TLFLI---------------GSYTIGKERLFLEVAR----VLRKKIYVN 592
+ FLI S G F V R+++ V
Sbjct: 621 IMARKGGNSSVSKFLIKPPSPVKEESDTPASDSAKDGTADFFTNVKEKKPPTCRQRLLVI 680
Query: 593 AAKFRVLK---CLDFSK----------------------EDIQWFTTNEHESHIHVMPMW 627
+ + K C+ ++ E T++ E+ +H M M
Sbjct: 681 CGTYSIGKERICIAIARALKTKIFASPAKIRICSKLGDPELTSLLTSDPLEAQVH-MQML 739
Query: 628 TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
+ L+ + Y FS IV F P+GW++
Sbjct: 740 MEIRAETLQDYLDSYRPHFSRIVGFRPSGWSY 771
>gi|336464041|gb|EGO52281.1| hypothetical protein NEUTE1DRAFT_125795 [Neurospora tetrasperma
FGSC 2508]
Length = 954
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +P VDAF+Y ++G C +FL+HFH DHY GL+ S+ HG IYCS +T LV
Sbjct: 501 PFYKIMPNFSICVDAFRYGAVQG-CKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLV 559
Query: 451 NMKIGIPWDRLQVLPLNQKT----TIAGIDVTCLEANHCPGSIIILFEPQNGKA-----V 501
++ + L + T + VT +EANHCPGS + LFE + GK +
Sbjct: 560 KTQLRTAAKYVVELEFGETVPVPETGGAVMVTMIEANHCPGSSLFLFEKKVGKEGRTQRI 619
Query: 502 LHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFPKQEAVIQF 549
LH GDFR +L + I LDTTY NP Y FP QE VIQ
Sbjct: 620 LHCGDFRACPAHVEHPLLKPETLDKVTGKIKQQKIDVCYLDTTYLNPRYSFPPQEDVIQA 679
Query: 550 VIE 552
E
Sbjct: 680 CAE 682
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 57/103 (55%), Gaps = 11/103 (10%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+ L + G+Y+IGKER+ + +A+ L KI+ + +K R+ K LD E T + E+ +
Sbjct: 769 RLLVVCGTYSIGKERICVAIAQALGSKIFASPSKIRITKQLD-DPELSSLMTADPREAQV 827
Query: 622 HVMPMW-----TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
H+ + TLA + L H SN FS IV F P+GW++
Sbjct: 828 HMQALGEIRADTLAEYLEL-HRSNG----FSRIVGFRPSGWSY 865
>gi|320591532|gb|EFX03971.1| DNA repair protein pso2 [Grosmannia clavigera kw1407]
Length = 883
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 112/233 (48%), Gaps = 24/233 (10%)
Query: 338 ANKLITDFFLGSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRK--HKDIPTW 395
AN + D S T+V ++T + S + + A + S+GR+ + P +
Sbjct: 326 ANPITIDGSGVSGTSVAPMATSAFAKLMSSHAEDAAWATAVAHANSSRGRQSYERTCPFY 385
Query: 396 CCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK 453
+PG VDAF+Y + G C +FL+HFH DHY GLT + HG IYCS +T+ LV +
Sbjct: 386 KIMPGFFICVDAFRYGPVEG-CRAYFLSHFHSDHYVGLTAKWSHGPIYCSKVTSSLVKTQ 444
Query: 454 IGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQ--NGKA--VLHTGD 506
+G + + Q + G+ VT + ANHCPGS + LF NG+ +LH GD
Sbjct: 445 LGTAAKWVVAIEYEQTVDVPGTGGVQVTMIPANHCPGSSLFLFTKTLPNGRTQRILHCGD 504
Query: 507 FRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFPKQEAVI 547
FR S+L + I LDTTY NP Y FP Q VI
Sbjct: 505 FRACPAHVQHSLLRPETLDAVTGKTRQQKIDVCYLDTTYLNPRYSFPPQNDVI 557
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 46/206 (22%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+ L + G+Y+IGKER+ + +A+ L KIY + AK R+++ LD E T+N E+ +
Sbjct: 632 RLLVVCGTYSIGKERICVAIAQALGSKIYASPAKIRIMQQLD-DPELAALMTSNPAEAQV 690
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP-------------- 667
H M M + L Y+ FS IV F P+GW + +
Sbjct: 691 H-MQMLMEMRAETLATYHETYSAHFSRIVGFRPSGWNYRPSMANNETKARDGSSGAAVAA 749
Query: 668 ----------------GRRW-----------QQGTI---IRYEVPYSEHCSFTELKEFVK 697
G W Q+G+ + + VPYSEH SF EL FV
Sbjct: 750 GAGLAPGSLTTTTLLHGAGWRTRFGMRDLLPQRGSTREAMCFGVPYSEHSSFRELALFVM 809
Query: 698 FVSPEHIIPSVNNDGRDSANAMVSLL 723
+ + ++P+VN S M + L
Sbjct: 810 ALRIDKVVPTVNVGSEQSRRRMKAWL 835
>gi|336274062|ref|XP_003351785.1| hypothetical protein SMAC_00330 [Sordaria macrospora k-hell]
gi|380096065|emb|CCC06112.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1048
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 94/185 (50%), Gaps = 28/185 (15%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +P VDAF+Y ++G C +FL+HFH DHY GL+ S+ HG IYCS +T LV
Sbjct: 513 PFYKIMPNFSICVDAFRYGAVQG-CKAYFLSHFHSDHYMGLSASWVHGPIYCSKVTGSLV 571
Query: 451 NMKIG------IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA---- 500
++ + + + +P+ Q T + VT +EANHCPGS + LFE Q GK
Sbjct: 572 KTQLRTAAKYVVELEFGETVPVPQ--TGGAVMVTMIEANHCPGSSLFLFEKQVGKEGRTQ 629
Query: 501 -VLHTGDFRFSEEMASMSVLQ------------TCPIHTLILDTTYCNPLYDFPKQEAVI 547
+LH GDFR +L+ I LDTTY NP Y FP QE VI
Sbjct: 630 RILHCGDFRACPAHVEHPLLKPETLDKVTGKTRQQKIDVCYLDTTYLNPRYSFPPQEDVI 689
Query: 548 QFVIE 552
E
Sbjct: 690 HACAE 694
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 549 FVIEAIQAESFNPKTLFLI-GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
F + SF L ++ G+Y+IGKER+ + +A+ L KI+ + +K R+ K L E
Sbjct: 774 FTALTSSSSSFRKNRLLVVCGTYSIGKERICVAIAQALGSKIFASPSKIRITKQLG-DAE 832
Query: 608 DIQWFTTNEHESHIHVMPMW-----TLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF 659
T++ E+ +H+ + TLA + L H SN FS IV F P+GW++
Sbjct: 833 LFGLMTSDPREAQVHMQALGEIRADTLAEYLEL-HRSNG----FSRIVGFRPSGWSY 884
>gi|218188863|gb|EEC71290.1| hypothetical protein OsI_03304 [Oryza sativa Indica Group]
Length = 1226
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 109/196 (55%), Gaps = 18/196 (9%)
Query: 530 DTTYCNPLYDFPKQEAVIQFVIEAI-----QAESFNPKTLFLIGSYTIGKERLFLEVARV 584
DTTYCNP + FP Q+ +++V+ +I ++ + + L LI +Y +GKER+ LEVAR
Sbjct: 30 DTTYCNPKFTFPPQKESLEYVVNSIKRVKEESRASGERVLCLIATYVVGKERILLEVARR 89
Query: 585 LRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA--------SFKRLK 636
KI+V++ K +L L ED FT + + +HV L +F ++K
Sbjct: 90 CGCKIHVDSRKMEILTLLGIGGED-GVFTEDAAATDVHVTGWNILGETWPYFRPNFVKMK 148
Query: 637 HMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFV 696
+ + ++ V F PTGW + + KK+ R + I + VPYSEH S+ EL+++V
Sbjct: 149 EIMVERG--YNKAVGFVPTGWMY-ETKKEGFAVRTKDSLEI-HLVPYSEHSSYNELRDYV 204
Query: 697 KFVSPEHIIPSVNNDG 712
KF+ P+ +IP+V DG
Sbjct: 205 KFLHPKRVIPTVGLDG 220
>gi|170056694|ref|XP_001864146.1| artemis protein [Culex quinquefasciatus]
gi|167876433|gb|EDS39816.1| artemis protein [Culex quinquefasciatus]
Length = 397
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 161/326 (49%), Gaps = 34/326 (10%)
Query: 398 VPGTPFRVDAFKYL-RGDCSHWFLTHFHMDHYQGLTR-SFHHGKIYCSLITARLVNMKIG 455
+PG VD F R + +FL+H H DH QGL G IY S I+A + +
Sbjct: 11 IPG--ISVDRFTEANRTKSAVFFLSHCHTDHMQGLQDPEPLPGPIYTSSISAVFLKHRYP 68
Query: 456 IPWDRLQVL-----PLNQKT--TIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
D ++ L P++ T + VT L A HCPGS++ LFE + + +L+TGDFR
Sbjct: 69 QLADCIRTLDLGTTPIDMPTGSNPTHLTVTTLPAGHCPGSVMFLFETERDRKILYTGDFR 128
Query: 509 FS-EEMASMSVLQTCPIHTLILDTTYCNPLYD-FPKQE----AVIQFVIEAIQAESFNPK 562
S +++ S+ LQ+ +H L LDTT+ N Y FP Q ++Q E + + N
Sbjct: 129 LSPKDLRSLLPLQSITLHVLYLDTTFFNRTYTYFPSQSESLAKIVQLTKEWLDRDPRNVI 188
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVN---AAKFRVLKCLDFSKEDIQWFTTNEHES 619
+ L Y G E LF+E+AR L+++I+VN A ++R L LD + T+ S
Sbjct: 189 SFKLPALY--GSEFLFIELARQLQQRIHVNAQEAQQYRYLASLDDA-------ITSAGGS 239
Query: 620 HIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ-QGTIIR 678
IH + A++++L + ++ ++ S W + K+ W+ +
Sbjct: 240 RIHACLRTSNANYRKLP-CQPELDPKYVRVLRPSALRW---RNLKQGESYCWRLRKNEEE 295
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHI 704
+ + YS H S EL++F++++ PE +
Sbjct: 296 FGICYSNHASCGELEDFLRYLKPEEV 321
>gi|449297636|gb|EMC93654.1| hypothetical protein BAUCODRAFT_76521 [Baudoinia compniacensis UAMH
10762]
Length = 649
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 94/190 (49%), Gaps = 27/190 (14%)
Query: 389 HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ P + +PG VDAF+Y ++G C +FL+HFH DHY GLT S+ HG IYCS +T
Sbjct: 176 QRTCPFYKILPGLFICVDAFRYGAVQG-CQAYFLSHFHSDHYIGLTSSWSHGPIYCSHVT 234
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNGKA--- 500
A LV ++ + + L Q + G+ VT + ANHCPGS + LFE GK
Sbjct: 235 ANLVRQQLRVDPKYVVDLEFEQPIEVPGTRGVKVTMIPANHCPGSSLYLFEKVVGKKTNG 294
Query: 501 ------VLHTGDFRFSEEMASMSVL------------QTCPIHTLILDTTYCNPLYDFPK 542
+LH GDFR +L + I LDTTY NP Y FP
Sbjct: 295 EPRLQRILHCGDFRACRAHIEHPLLMPEVQDKISGKTREQKIDVCYLDTTYLNPKYAFPS 354
Query: 543 QEAVIQFVIE 552
Q+ VI+ E
Sbjct: 355 QQTVIKACAE 364
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 87/178 (48%), Gaps = 26/178 (14%)
Query: 556 AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
A+ + L ++G+Y+IGKER+ L +A+ L KIY +K R++ L+ + + + T +
Sbjct: 439 AQDGRGRLLVVVGTYSIGKERICLGIAKALNSKIYAPPSKMRIVSALEDPELNAR-MTGD 497
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK---SP----- 667
+ +H+ P++ + + + L Y F+ V F P+GW + + SP
Sbjct: 498 PRAAQVHMTPLFEIRA-ETLDDYLKDYFPHFTRAVGFRPSGWNYRPPTSRFLESPSIASV 556
Query: 668 --GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
G W Q+G+ R + VPYSEH SF EL F + E +IP+VN
Sbjct: 557 LNGDNWKSIYSMKDLVPQRGSTSRASCFGVPYSEHSSFRELTMFCCALKIEKVIPTVN 614
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 135 RLSEESEEEEEDAVLDVLLKLCDKNDVNCNKIDESVRCPLCGIDISDLNEELRQAHTNNC 194
RL E +E + D VL D+ D S CP+C + ++ ++E+ H NNC
Sbjct: 26 RLEAEGDERDYDPVLAEGTPNVKVEDLPTPPADNSPSCPICSVSLTGIDEQEAGLHVNNC 85
Query: 195 LD 196
LD
Sbjct: 86 LD 87
>gi|350596085|ref|XP_003360736.2| PREDICTED: DNA cross-link repair 1A protein-like [Sus scrofa]
Length = 964
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ + P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL+++F +YCS +T
Sbjct: 715 RKRTCPFYKKIPGTGFTVDAFQYGVVEGCTAYFLTHFHSDHYAGLSKNFTF-PVYCSEVT 773
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + + G+ V L+ANHCPG++++LF N D
Sbjct: 774 GNLLKSKLHVQEQYIHPLPIDTECVVNGVKVVLLDANHCPGAVMVLFHLPNXXXXXXXXD 833
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTT 532
FR M S+L +HTL LDTT
Sbjct: 834 FRADPTM-ERSLLAGQKVHTLYLDTT 858
>gi|341038670|gb|EGS23662.1| eukaryotic translation initiation factor 3-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1494
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 26/183 (14%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y ++G C +FL+HFH DHY GLT ++ HG IYCS +T LV
Sbjct: 1009 PFYKIMPGFSICVDAFRYGAVKG-CKAYFLSHFHSDHYMGLTANWTHGPIYCSKVTGSLV 1067
Query: 451 NMKIGIPWDRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEP--QNGKA--V 501
++ + L N TT+A G+ VT + ANHCPGS + LFE G+ +
Sbjct: 1068 KSQLRTAAKYVVELEFN--TTVAVPDTDGVTVTMIPANHCPGSSMFLFEKILSGGRVQRI 1125
Query: 502 LHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQEAVIQF 549
LH GDFR +L+ + + LDTTY NP Y FP Q VI+
Sbjct: 1126 LHCGDFRACPAHVEHPLLKPETVDAISSRTKQQKIDVCYLDTTYLNPRYSFPPQSDVIRA 1185
Query: 550 VIE 552
E
Sbjct: 1186 CAE 1188
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 84/182 (46%), Gaps = 36/182 (19%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+ L + G+Y+IGKER+ + +A+ L+ KIY AK R+ + LD E T++ E+ +
Sbjct: 1259 RLLVVCGTYSIGKERICVGIAQALQTKIYAAPAKLRMCRQLD-DPELTALLTSDPREAQV 1317
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR------------ 669
H+ + + + +++ + G FS IV F P+GW F KS +
Sbjct: 1318 HMHALMDINADTLAQYLQG-FKGHFSKIVGFRPSGWNFRPSVSKSAPKNLANLPPNSLPT 1376
Query: 670 -------RWQQGTIIR---------------YEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
+W+ R + VPYSEH SF EL F+ + E ++P+
Sbjct: 1377 TQLLHSPQWRPQITARDLVPQRGGNATEAMCFAVPYSEHSSFRELALFLMALQIEKVVPT 1436
Query: 708 VN 709
VN
Sbjct: 1437 VN 1438
>gi|429962339|gb|ELA41883.1| hypothetical protein VICG_01067 [Vittaforma corneae ATCC 50505]
Length = 466
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 109/213 (51%), Gaps = 12/213 (5%)
Query: 391 DIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
++P + + VD F +C+H+FL+HFH DHY L +SF ++CS T+ LV
Sbjct: 15 EVPVCKRILDSTITVDCFDLKITNCTHYFLSHFHADHYTKLNKSFEF-PVFCSKTTSELV 73
Query: 451 NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+G L++ V +EANHCPG++ +F N + VLHTGDFR+
Sbjct: 74 CAALGAKAVGLEMYT---SYDFGSFVVRLIEANHCPGAVCFIF-LINNQFVLHTGDFRYC 129
Query: 511 EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAES--FNPKTLFLIG 568
+ ++ + C + LD TY N + FP Q+ I +++ + ++ L
Sbjct: 130 KVYHTLDISFKC----VYLDNTYQNFI-SFPSQKEAISKILQRLDQDNRLCRLNVCVLCC 184
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC 601
+Y IGKE++FL +A L +K+ V K+ + KC
Sbjct: 185 TYRIGKEKIFLSIAEYLNEKVQVTEDKYDIYKC 217
>gi|413952235|gb|AFW84884.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 374
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 141/307 (45%), Gaps = 49/307 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL--TRSFHHGKIYCSLITARLVNMKIGIPWDRLQ 462
VD F G +FLTH H DH +GL + HG +YCS TARL+ ++
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRF-------- 56
Query: 463 VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS--------EEMA 514
GID + L PGS++ LF G +L+TGDFR+ +
Sbjct: 57 ----------PGIDASLLRP-LAPGSLMYLFRGDLG-CMLYTGDFRWELGCDEARRAKQD 104
Query: 515 SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
+ L I L LD TYC+P +FP + V + VI+ I++ +P +IG T+GK
Sbjct: 105 LLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVIDIIRS---HPDHEVIIGVDTLGK 161
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
E L L ++R L+ KI+V + + + L E+ FTT + I +P +++ +
Sbjct: 162 EDLLLHISRALQTKIWVWPQRLQTIHLLGID-ENRDIFTTQTSLTRIRAVPRYSV-TIDN 219
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKE 694
L+ + N ++ + P W S+GK KS GR + S S EL++
Sbjct: 220 LEAL-NTVCPTIGILPSAIPCLWKSSEGKAKSKGRSSVK----------SIRSSGRELED 268
Query: 695 FVKFVSP 701
F+ V P
Sbjct: 269 FMHTVRP 275
>gi|367042878|ref|XP_003651819.1| hypothetical protein THITE_2112528 [Thielavia terrestris NRRL 8126]
gi|346999081|gb|AEO65483.1| hypothetical protein THITE_2112528 [Thielavia terrestris NRRL 8126]
Length = 984
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + +PG VDAF+Y + G C +FL+HFH DHY GLT S+ HG IYCS +T
Sbjct: 464 RTCPFYKIMPGFSICVDAFRYGAVEG-CQAYFLSHFHSDHYIGLTASWTHGPIYCSKVTG 522
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNG---KAV 501
LV ++ + L + + G+ VT + ANHCPGS + LFE G + +
Sbjct: 523 SLVKSQLKTAAKYVVELEFEKTVPVPQTNGVTVTMIPANHCPGSSLFLFEKTTGGRTQRI 582
Query: 502 LHTGDFRFSEEMASMSVLQTCPIHTL------------ILDTTYCNPLYDFPKQEAVIQF 549
LH GDFR L+ + + LDTTY NP Y FP Q+ V+
Sbjct: 583 LHCGDFRACPAHVEHPKLRPETVDAISGRTKQQKIDVCYLDTTYLNPRYSFPPQDEVVDA 642
Query: 550 VIE 552
E
Sbjct: 643 CAE 645
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 61/217 (28%)
Query: 553 AIQAESFNPKTLFLI-GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
A+ + NP L ++ G+Y+IGKER+ + +A+ LR KIY AK R+ LD E
Sbjct: 712 ALNGKPHNPNRLLVVCGTYSIGKERICVAIAKALRSKIYATPAKIRMCAQLD-DAELSAL 770
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYA-GRFSLIVAFSPTGWTF----------- 659
T N E+ +H+ + + + ++++ A G F+ IV P+GW +
Sbjct: 771 LTPNPSEAQVHMQMLMEIRAETLAEYLAPFKARGEFARIVGIRPSGWNYRPPPPGSSSFS 830
Query: 660 -----SKGKKK------------------SP----------GRRW-----------QQGT 675
+ G K SP G RW Q+G+
Sbjct: 831 PSTATAAGTNKNNNNSTATATAKGSLANLSPTALPTAQLLHGPRWRTHFTARDLAPQRGS 890
Query: 676 ---IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
+ VPYSEH SF EL FV + E ++P+VN
Sbjct: 891 SREALCLAVPYSEHSSFRELALFVMALRIERVVPTVN 927
>gi|58269998|ref|XP_572155.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57228391|gb|AAW44848.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 811
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 364 SGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLT 421
SG ++ D + +D + + P + + G P VDAF+Y + G + + LT
Sbjct: 293 SGHKEHEQWKDAEDDLRRDGKRYAGRRRAPFYKVLTGMPVAVDAFRYGAIPG-VTAYLLT 351
Query: 422 HFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI--------GIPWDRLQVLPLNQKTTIA 473
H H DHY L++S+++G IYCS TA L+ + G+P D +P T
Sbjct: 352 HAHSDHYTNLSKSWNNGPIYCSQTTANLIIHMLEVDPKWVHGLPND----MPFEMPNT-G 406
Query: 474 GIDVTCLEANHCPGSIIILFE--------------PQNGKA----VLHTGDFRFSEEMAS 515
G+ VT +EANHCPGS I LFE P G LH GDFR + +M
Sbjct: 407 GVTVTPIEANHCPGSSIFLFEGRQTVNAGDSGFASPYVGSKRVFRYLHCGDFRANPKMVL 466
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
+ PI+T LDTTY NP Y FP Q VI
Sbjct: 467 HPAIARAPINTCYLDTTYLNPKYCFPPQPLVI 498
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+TL ++G+Y+IGKER+ VA+ + KIY + K +L C E T++ E+ +
Sbjct: 601 RTLVVVGTYSIGKERIVKAVAKAIGSKIYCDQRKKGILLC-QTDPELHSMLTSDPIEAQV 659
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK------------KKSPGR 669
H++P+ + RL+ F ++ F PTGW++S ++ R
Sbjct: 660 HLLPLGNI-QLDRLQSYLTLLHPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTIIRRDQAR 718
Query: 670 RWQQGTI----------IRYEVPYSEHCSFTELKEFV 696
R+ +G + + Y VPYSEH SF EL F
Sbjct: 719 RFGEGDLKTMRGSSRNFMMYGVPYSEHSSFFELTCFA 755
>gi|403358146|gb|EJY78711.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Oxytricha trifallax]
Length = 673
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 142/332 (42%), Gaps = 47/332 (14%)
Query: 399 PGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK------------IYCS--- 443
P F+VD F R + +FL+H H DH +GL++ +G IY S
Sbjct: 41 PYKDFKVDNFYSNRKEQFTFFLSHMHEDHLRGLSKRSEYGNYGGPDEDWQWGTIYTSPKS 100
Query: 444 --LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAV 501
++ R N+K P+ R L L ++ TI V EANHCPG+++ LF+ G V
Sbjct: 101 KNILLLRFPNLK---PYVR--ALELYKQYTIKDRTVMLYEANHCPGAVMFLFKGAKG-TV 154
Query: 502 LHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ-AESFN 560
LHTGDFRF M + I L LD T+ DFP QE + + I+ +
Sbjct: 155 LHTGDFRFKPSM--IDYFTNIKIDYLYLDNTFATTDEDFPPQEEAFEKLYSIIEHKRGVD 212
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI----QWFTTNE 616
F + YT+GKE +F +A++ KI + + L + +W
Sbjct: 213 QNYQFHLFCYTLGKEEVFHNLAQLFSTKIMMQKDRITKLNAIGMGSSKFVTRDEWSKDKT 272
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTI 676
+ I V M L K + + + TGW K + R+
Sbjct: 273 GDCFIQVKVMKDLPKTK-------EDCDKKKNVHFLCMTGW---KNQYNINHPRF----- 317
Query: 677 IRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+++PYS H S+ EL +FVK + P ++ +V
Sbjct: 318 --HKIPYSSHSSYKELDQFVKSLKPGKLVFTV 347
>gi|134113669|ref|XP_774419.1| hypothetical protein CNBG0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257057|gb|EAL19772.1| hypothetical protein CNBG0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 811
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 102/212 (48%), Gaps = 34/212 (16%)
Query: 364 SGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLT 421
SG ++ D + +D + + P + + G P VDAF+Y + G + + LT
Sbjct: 293 SGHKEHEQWKDAEDDLRRDGKRYAGRRRAPFYKVLTGMPVAVDAFRYGAIPG-VTAYLLT 351
Query: 422 HFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI--------GIPWDRLQVLPLNQKTTIA 473
H H DHY L++S+++G IYCS TA L+ + G+P D +P T
Sbjct: 352 HAHSDHYTNLSKSWNNGPIYCSQTTANLIIHMLEVDPKWVHGLPND----MPFEMPNT-G 406
Query: 474 GIDVTCLEANHCPGSIIILFE--------------PQNGKA----VLHTGDFRFSEEMAS 515
G+ VT +EANHCPGS I LFE P G LH GDFR + +M
Sbjct: 407 GVTVTPIEANHCPGSSIFLFEGRQTVNAGDSGFASPYVGSKRVFRYLHCGDFRANPKMVL 466
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
+ PI+T LDTTY NP Y FP Q VI
Sbjct: 467 HPAIARAPINTCYLDTTYLNPKYCFPPQPLVI 498
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+TL ++G+Y+IGKER+ VA+ + KIY + K +L C E T++ E+ +
Sbjct: 601 RTLVVVGTYSIGKERIVKAVAKAIGSKIYCDQRKKGILLC-QTDPELHSMLTSDPIEAQV 659
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK------------KKSPGR 669
H++P+ + RL+ F ++ F PTGW++S ++ R
Sbjct: 660 HLLPLGNI-QLDRLQSYLTLLHPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTIIRRDQAR 718
Query: 670 RWQQGTI----------IRYEVPYSEHCSFTELKEFV 696
R+ +G + + Y VPYSEH SF EL F
Sbjct: 719 RFGEGDLKTMRGSSRNFMMYGVPYSEHSSFFELTCFA 755
>gi|402073709|gb|EJT69261.1| DNA cross-link repair protein SNM1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 893
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 102/206 (49%), Gaps = 29/206 (14%)
Query: 379 AAKDQSKGRK--HKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRS 434
A++ S+G++ + P + +PG VDAF+Y + G C +FL+HFH DHY GLT
Sbjct: 370 ASEHASRGKQAYERTCPFYKIMPGLSICVDAFRYGAVEG-CKAYFLSHFHSDHYIGLTAK 428
Query: 435 FHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIII 491
+ HG IYCS +T L+ ++ + L ++ + G+ VT + ANHCPGS +
Sbjct: 429 WAHGPIYCSKVTGSLIKSQLRTAAQYVVELDFEERFVVPDTNGVAVTMIPANHCPGSSLF 488
Query: 492 LFEPQNG---------KAVLHTGDFRFSEEMASMSVL------------QTCPIHTLILD 530
LFE + +LH GDFR + ++L +T I LD
Sbjct: 489 LFEKTTPGRPGDRPRIQRILHCGDFRACPAHSDHALLRPRITDAVSGKIRTQKIDVCYLD 548
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQA 556
TTY NP Y FP Q+ VI+ E A
Sbjct: 549 TTYLNPRYSFPPQDDVIRSCAELCAA 574
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 33/182 (18%)
Query: 559 FNPKTLFLI--GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+P++ L+ G+Y+IGKER+ +A+ LR KI+ + AK R++ L E T+
Sbjct: 637 IDPRSRLLVVCGTYSIGKERICKAIAQALRTKIFASPAKIRIIGQLG-DPELAALMTSKP 695
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP--------- 667
E+ +H+ + + + +++ A F ++ F P+GW + +
Sbjct: 696 AEAQVHMQALAEIRAETLADYLATHRA-HFGRVIGFRPSGWNYRPAGAAANAAAQPSSVA 754
Query: 668 ------GRRW-----------QQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
G W Q+G+ + VPYSEH SF EL F+ + E ++P+
Sbjct: 755 TTSLLHGGAWRPAYTSRHLAPQRGSTAEAMCFGVPYSEHSSFRELALFLMSLQVERVVPT 814
Query: 708 VN 709
VN
Sbjct: 815 VN 816
>gi|1326018|emb|CAA54243.1| SNM1 [Saccharomyces cerevisiae]
Length = 216
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 109/212 (51%), Gaps = 46/212 (21%)
Query: 426 DHYQGLTRSFHH-------GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG-IDV 477
DHY L +S+++ +YCS ITA LVN+K IP D +Q+LP+N++ I I V
Sbjct: 1 DHYIRLKKSWNNPDENPIKKTLYCSKITAILVNLKFKIPMDEIQILPMNKRFWITDTISV 60
Query: 478 TCLEANHCPGSIIILFEP-------QNGKAVLHTGDFRFSEEMAS-----MSVLQTCPIH 525
L+ANHCPG+II+LF+ + + +LHTGDFR + +M ++ I
Sbjct: 61 VTLDANHCPGAIIMLFQEFLANSYDKPIRQILHTGDFRSNAKMIETIQKWLAETANETID 120
Query: 526 TLILDTTYCNPLYDFPKQ----EAVIQFVIEAIQ----------------------AESF 559
+ LDTTY Y+FP Q E V F + I+ +
Sbjct: 121 QVYLDTTYMTMGYNFPSQHSVCETVADFTLRLIKHGKNKTFGDSQRNLFHFQRKKTLTTH 180
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
+ LFL+G+YTIGKE+L +++ L+ K++V
Sbjct: 181 RYRVLFLVGTYTIGKEKLAIKICEFLKTKLFV 212
>gi|405121618|gb|AFR96386.1| DNA cross-link repair protein pso2/snm1 [Cryptococcus neoformans
var. grubii H99]
Length = 809
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/212 (35%), Positives = 101/212 (47%), Gaps = 34/212 (16%)
Query: 364 SGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLT 421
SG ++ D + +D + + P + + G P VDAF+Y + G + + LT
Sbjct: 296 SGHKEHEQWKDAEADLRRDGKRFAGRRKAPFYKVLTGMPVAVDAFRYGAIPG-VTAYLLT 354
Query: 422 HFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI--------GIPWDRLQVLPLNQKTTIA 473
H H DHY L++S+ +G IYCS TA L+ + G+P D +P T
Sbjct: 355 HAHSDHYTNLSKSWSNGPIYCSETTANLIIHMLEVDPKWVHGLPND----MPFEMPNT-G 409
Query: 474 GIDVTCLEANHCPGSIIILFE--------------PQNGKA----VLHTGDFRFSEEMAS 515
G+ VT +EANHCPGS I LFE P G LH GDFR + +M
Sbjct: 410 GVTVTPIEANHCPGSSIFLFEGRQTVNAGDSGFASPYVGSKRVFRYLHCGDFRANPKMVL 469
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
+ PI+T LDTTY NP Y FP Q VI
Sbjct: 470 HPAIARAPINTCYLDTTYLNPKYCFPPQPLVI 501
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+TL ++G+Y+IGKER+ VA+ + KIY + K +L C E T++ E+ +
Sbjct: 604 RTLVVVGTYSIGKERIVKAVAKAIGSKIYCDQRKKGILLC-QTDPELHSMLTSDPTEAQV 662
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK------------KKSPGR 669
H++P+ + RL+ F ++ F PTGW++S ++ +
Sbjct: 663 HLLPLGNI-QLDRLQSYLTLLHPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTVIRRDQAK 721
Query: 670 RWQQGTI----------IRYEVPYSEHCSFTELKEFV 696
R+ +G + + Y VPYSEH SF EL F
Sbjct: 722 RFGEGDLKTMRGSNRNFMMYGVPYSEHSSFFELTCFA 758
>gi|150864521|ref|XP_001383367.2| hypothetical protein PICST_56782 [Scheffersomyces stipitis CBS
6054]
gi|149385777|gb|ABN65338.2| predicted protein, partial [Scheffersomyces stipitis CBS 6054]
Length = 628
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 147/366 (40%), Gaps = 106/366 (28%)
Query: 405 VDAFKYL-RGDCSHWFLTHFHMDHYQGLTRSFHHGK-----------------IYCSLIT 446
VDAF Y +FLTHFH DHY G+++ + + + IYC+ IT
Sbjct: 136 VDAFCYAPHATIDQYFLTHFHSDHYGGISKKWSYERVFKEDTDFDNDSKYRRIIYCTKIT 195
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIA------------------------GIDVTCLEA 482
L+ + ++ L + + I G+ VT + A
Sbjct: 196 GVLLTRCFSVDPRFIKHLEMETRYIIKSFVDMTQGTSYLQDGGFPSQKCDPGLYVTPITA 255
Query: 483 NHCPGSIIILFEPQ----NGKAVLHTGDFRFSEEMASMSVL--------QTCPIHTLILD 530
NHCPGS I LFE + + +LH GDFR +E + +L + P+ + LD
Sbjct: 256 NHCPGSAIFLFESYGVDGSYRTILHCGDFRVNESILKHPLLYRFNIENENSIPLDKVYLD 315
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQ--------AESFNPKTLF----------------- 565
TTY P Y+FPKQE V + + E E+ + +LF
Sbjct: 316 TTYMAPEYNFPKQELVCETIGELFYDLIYQENVDETLSSNSLFSNWFGVFTQSRITDFWK 375
Query: 566 ---------------LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ 610
L+G+Y IGKERL + +++ L IYV+ R K + +
Sbjct: 376 TGSSQSMSKKKKFLILVGTYLIGKERLAIAISKRLNCPIYVSTISSRRDKIEIVRSYEDE 435
Query: 611 WFTT----------NEHESHIHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWT 658
+ + ++ E +H++PM ++S L + N+Y F V PTGW+
Sbjct: 436 YLNSVLIEDDLALQSKAECVVHLVPMKIVSSATELSNYFNYNKYYEHFERCVGLRPTGWS 495
Query: 659 FSKGKK 664
F G +
Sbjct: 496 FVPGSR 501
Score = 39.7 bits (91), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
Y +PYSEH SF EL F F + + IIP+VN +S M ++
Sbjct: 572 YSLPYSEHSSFRELAYFSIFFNIKQIIPTVNVHNSESIRLMKGII 616
>gi|171684601|ref|XP_001907242.1| hypothetical protein [Podospora anserina S mat+]
gi|170942261|emb|CAP67913.1| unnamed protein product [Podospora anserina S mat+]
Length = 916
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 90/181 (49%), Gaps = 22/181 (12%)
Query: 393 PTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
P + +PG VDAF+Y + G C +FL+HFH DHY GLT ++ HG IYCS +T LV
Sbjct: 431 PFYKIMPGFSICVDAFRYGAVEG-CKAYFLSHFHSDHYIGLTANWTHGPIYCSKVTGSLV 489
Query: 451 NMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQNGKA----VLH 503
++ + L ++ + G+ VT + ANHCPGS + LFE G +LH
Sbjct: 490 KTQLKTAAKYVVELEFDKTVPVPHTKGVTVTMIPANHCPGSSLFLFEKAMGGGKTHRILH 549
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLI------------LDTTYCNPLYDFPKQEAVIQFVI 551
GDFR + L+ I + LDTTY NP Y FP Q+ VI
Sbjct: 550 CGDFRACQAHLEHPHLRPETIDAVTGKTKHQKIDVCYLDTTYLNPKYSFPPQKDVIATCA 609
Query: 552 E 552
E
Sbjct: 610 E 610
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 89/207 (42%), Gaps = 39/207 (18%)
Query: 551 IEAIQAESFNP------KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDF 604
+ A A S NP + L L G+Y+IGKER+ + +A L KIY + K +++ LD
Sbjct: 668 LNAFTALSGNPQPSQRNRLLILCGTYSIGKERICVGIALALESKIYASPYKLKIVNQLD- 726
Query: 605 SKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK 664
E I T N E+ +H+ + L + ++ FS IV F P+GW +
Sbjct: 727 DPELISLLTPNPQEAQVHLASLSDLNKENLISYLEENRRFGFSRIVGFKPSGWNYRPPSL 786
Query: 665 KS--------PG--------------RRWQQGTIIRYE----------VPYSEHCSFTEL 692
KS PG R+++ +I VPYSEH SF EL
Sbjct: 787 KSLNIKADMAPGSVPMEQLLYGKAWRSRFRKADLIPMRGSTKEGVLLGVPYSEHSSFREL 846
Query: 693 KEFVKFVSPEHIIPSVNNDGRDSANAM 719
FV + ++P+VN G S M
Sbjct: 847 AIFVMGLKIGRVVPTVNVGGEQSRKRM 873
>gi|71896183|ref|NP_001026765.1| protein artemis [Gallus gallus]
gi|71153324|sp|Q5QJC2.1|DCR1C_CHICK RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=SNM1 homolog C; Short=chSNM1C;
AltName: Full=SNM1-like protein
gi|47835016|gb|AAR27406.1| artemis [Gallus gallus]
Length = 714
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 158/336 (47%), Gaps = 42/336 (12%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL--------TRSFHHGKIYCSLITARLV--NMKI 454
+D F Y +FL+H H DH +GL +S K+YCS +T L+ N K
Sbjct: 16 IDRFDYDNLRARAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNSKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ + L + T I+ +D VT L A HCPGS++ LF+ +NG VL+T
Sbjct: 76 AFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPGSVMFLFQGENG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAES 558
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++ +
Sbjct: 135 GDFRLAKGEAARMELLHSGTSVKDIQSVYLDTTFCDPRFYHIPSREECLSGILELVRSWT 194
Query: 559 FNPK--TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ ++L G E LF+ ++ L K++VN K + K + +I + T +
Sbjct: 195 TLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVN--KLDMFKNM----PEILYHITTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHM----SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
+ IH + R + + Q +I T W + KK + R
Sbjct: 249 RYTQIHACRHPKDDDYVRGNRLPCGITCQNGTPLHVISIKPSTMWFGERIKKTNVIVRTG 308
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ T Y +S H S++E+ +F+ ++ P ++ P+V
Sbjct: 309 EST---YRACFSFHSSYSEIMDFLSYIRPVNVYPNV 341
>gi|342320970|gb|EGU12908.1| DNA repair protein Pso2/Snm1, putative [Rhodotorula glutinis ATCC
204091]
Length = 925
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 107/231 (46%), Gaps = 51/231 (22%)
Query: 376 KKHAAKDQSKGR----KHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQG 430
KK D+ KGR + + +P + + G VDAFKY + D C +FL+H H DHYQ
Sbjct: 320 KKAEEADKQKGRLPKGEERKVPFYKWIDGMEITVDAFKYGKIDGCKAYFLSHAHSDHYQN 379
Query: 431 LTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSII 490
L S+ HG+IY S T L+ +K+ + + L LP+++ + GIDVT ++ANHCPGS++
Sbjct: 380 LNSSWSHGEIYASQTTINLIKLKLKLKDEYLFPLPMDKTVKVHGIDVTLIDANHCPGSVL 439
Query: 491 ILFE-------------PQNGKAVLHTGDFRFSEE---MASMSVLQTCP----------- 523
LFE P LH GDFR S + SMS
Sbjct: 440 FLFEGPHTDPKSPFSKTPNRIFRYLHCGDFRASPQHILHPSMSYPTPATSRMMARASSST 499
Query: 524 -------------------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
+ + LDTTY +P Y FP QE VI E ++
Sbjct: 500 SQPSSSQPPDPLPGRTLKRLDAIYLDTTYLSPSYCFPAQELVISACAELVR 550
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEH-ESH 620
+ L L+G+Y+IGKER+ +A+ L K++ ++ K + D D+ T + E+
Sbjct: 713 RLLVLVGTYSIGKERIVKAIAQALSTKVFCDSYKRSLFLAQD--DPDLHALLTEDPLEAQ 770
Query: 621 IHVMPMWTLASFKRLKHMSNQYA----GRFSLIVAFSPTGWTF-SKGKKKSPG------- 668
+H+ + + ++++ A G F+ ++ PTGWT+ S+ K K P
Sbjct: 771 VHIGGLRDITREAMQEYLAKFKAPRIEGGFTKMIGLRPTGWTYRSETKDKYPSIPKILQI 830
Query: 669 -------------RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDS 715
+R + + VPYSEH SF EL F + +IP+VN S
Sbjct: 831 EQQRKFSPAGLYPQRDSTPITMAFGVPYSEHSSFFELTCFCLSLDWTRVIPTVNVHTASS 890
Query: 716 ANAM 719
N M
Sbjct: 891 RNKM 894
>gi|326911096|ref|XP_003201898.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Meleagris
gallopavo]
Length = 714
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 158/338 (46%), Gaps = 46/338 (13%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL--------TRSFHHGKIYCSLITARLV--NMKI 454
+D F + +FL+H H DH +GL +S K+YCS +T L+ N K
Sbjct: 16 IDRFDHDNLRARAYFLSHCHKDHMKGLRAPALRRRLQSSLKVKLYCSPVTKELLLTNSKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ + L + T I+ +D VT L A HCPGS++ LF+ +NG VL+T
Sbjct: 76 EFWENHIVALEVETPTQISLVDETTGEKEDIEVTLLPAGHCPGSVMFLFQGENG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAES 558
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++ +
Sbjct: 135 GDFRLAKGEAARMELLHSGTRVKDIQSVYLDTTFCDPRFYHIPSREECLNGILELVRSWT 194
Query: 559 FNPK--TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTT 614
+ ++L G E LF+ ++ L K++VN LD K +I + T
Sbjct: 195 SLSRYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNR--------LDMFKNMPEILYHIT 246
Query: 615 NEHESHIHVMPMWTLASFKRLKHM----SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR 670
+ + IH + R + + Q +I T W + KK + R
Sbjct: 247 TDRYTQIHACRHPKDDDYFRGNRLPCGITCQNGTPLHVISIKPSTMWFGERIKKTNVIVR 306
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ T Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 307 TGEST---YRACFSFHSSYSEIKDFLSYICPVNVYPNV 341
>gi|402590499|gb|EJW84429.1| hypothetical protein WUBG_04661 [Wuchereria bancrofti]
Length = 561
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 148/310 (47%), Gaps = 50/310 (16%)
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI--------GIPWDRLQVLPLNQ 468
++FLTH H DHY + +++G IYCS +TAR++ + GI + L LN
Sbjct: 25 YYFLTHAHSDHYGAVGNKWNNGNIYCSPVTARVLPIVTQRHKSKCGGIRSHIIHALDLNV 84
Query: 469 KTTIAGIDVTCLEANHCPGSIIILFEPQ--NGKAVLHTGDFR----FSEEMASMSVLQTC 522
+ G V L+ANH PGS++ LFE + +L TGDFR + + + SVL
Sbjct: 85 WHYMDGFSVMLLDANHIPGSVMFLFEGDRISEGRILFTGDFRADIQLYKNVFAASVLHET 144
Query: 523 PIHTLILDTTYCN-PLYDFPKQEAVIQFVIEAIQA--ESFNPKTLFLIGSYTIGKERLFL 579
++T+ LDTTY N +FP +EA + ++ + F T+ + +G+E+L +
Sbjct: 145 SLNTIYLDTTYINCTREEFPSREASSAEMCNVLRKLFDGFKSVTIMVP---KVGREQLLV 201
Query: 580 EVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS 639
++A + KI+V+ +F+V + L S ++FTT + ++ I ++S R
Sbjct: 202 DIAVEFKCKIWVDYIRFQVAEILGLS----EYFTTKKEDTSIWTCTRQNISSVFR---DP 254
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEF 695
N Y S++ P +II E + YS+H S E+++F
Sbjct: 255 NVYVIDVSMLQYIKP-------------------NSIINNERMCYIEYSDHSSPNEIRDF 295
Query: 696 VKFVSPEHII 705
+ +S +I
Sbjct: 296 LSQLSFSEVI 305
>gi|327286641|ref|XP_003228038.1| PREDICTED: protein artemis-like [Anolis carolinensis]
Length = 592
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 42/336 (12%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ N +
Sbjct: 16 IDRFDRENLQARAYFLSHCHKDHMKGLRAPSMKRRLACSLTVRLYCSPVTKELLLTNPRY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ + L + T I+ +D VT L A HCPGS++ LF+ +NG VL+T
Sbjct: 76 NFWENYIVALEIETPTQISLVDEASGEKEDIVVTLLPAGHCPGSVMFLFQGENG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAES 558
GDFR ++ E+A M +L + I +L LDTT+C+P Y P +E +Q ++E ++
Sbjct: 135 GDFRLAKGEVARMELLHSGNRVKDIQSLYLDTTFCDPRFYQIPSREECMQGILELVRNWI 194
Query: 559 FNPK--TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ ++L G E LF ++ L K++VN K + K + +I + T++
Sbjct: 195 TLSRYHVVWLNCKAAYGYEYLFTNLSEELGVKVHVN--KLDMFKNM----PEILYHITSD 248
Query: 617 HESHIHVMPMWTLASFKRLKH----MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
+ IH R M++Q + +I T W + +K + R
Sbjct: 249 RHTQIHACRHPRDDEIMRSNRLPCGMTSQNGKQLHIISVKPSTMWFGERMRKTNVIVRTG 308
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + Y +S H SF+E+++FV ++ P +I P+V
Sbjct: 309 ESS---YRACFSFHSSFSEIQDFVSYICPVNIYPNV 341
>gi|328767951|gb|EGF77999.1| hypothetical protein BATDEDRAFT_27168 [Batrachochytrium
dendrobatidis JAM81]
Length = 440
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/342 (30%), Positives = 163/342 (47%), Gaps = 41/342 (11%)
Query: 404 RVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV 463
++D F++ + + LTH H DH GL K+YC+ +TA+L+ +G L
Sbjct: 20 QIDMFQHKHHTVA-YLLTHAHADHMVGLVSLLSVNKVYCTPVTAKLLQTTMGA--SNLFP 76
Query: 464 LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS- 517
+ N+ I + +T L A+HCPGS +IL NG +L TGDFR + + S+S
Sbjct: 77 IVFNKPFHIQLANNKHLQITFLPAHHCPGSAMILIIGDNG-TILCTGDFRSEKRIDSLSF 135
Query: 518 VLQTCPIHTLILDTTYCNPLY-DFPKQEAVIQFVIEAIQ--AESFNPKTLFLIGSYTIGK 574
+ I ++ LDTT+ +P + + P + +IE I+ +ES N + S TIG
Sbjct: 136 AIDRLSIDSVYLDTTFAHPNWMNLPTRLESANALIEVIKTYSESVN----VYLQSKTIGY 191
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLD-FSKEDIQW---------FTTNEHESHIHVM 624
E L++ +AR KIYV A++ + +D K D +W TT+E E+ V
Sbjct: 192 EHLWVCLARHFNTKIYVTASRKIKYELMDQCKKADEEWLHECTVSQFLTTDEQEARFFV- 250
Query: 625 PMWTLASFKRLK------HMSNQYAGRFSLIVAFS-PTGWTFSKGKKKSPGRRWQQGTII 677
M A + K H S + GR S A S T W G K + + +
Sbjct: 251 DMCPKAELSKTKGCLLNIHPSAMFWGRGSDSDAISHHTYWKRVSGFKDFIVQDLRDS--M 308
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+ + YS H S +EL EFV + P+ + P+V + S+NAM
Sbjct: 309 SWRLLYSMHSSLSELIEFVAVLKPQRVYPTVTS----SSNAM 346
>gi|312066528|ref|XP_003136313.1| DNA ligase I [Loa loa]
Length = 581
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV--------NMKIGIPWDRLQVLPLNQ 468
++FLTH H DHY + +++G IYCS +TA ++ + + GI + L LN
Sbjct: 25 YYFLTHAHSDHYAAVDNKWNNGPIYCSPVTAHILPIVTHRPRSKRAGIRSHLIHALDLNV 84
Query: 469 KTTIAGIDVTCLEANHCPGSIIILFEPQ--NGKAVLHTGDF----RFSEEMASMSVLQTC 522
+ G V L+ANH PGS++ LFE + +L TGDF R + + ++SVL+
Sbjct: 85 WHHMDGFSVMLLDANHVPGSVMFLFEGDKISEGPILFTGDFRADIRLYQNIFAVSVLRER 144
Query: 523 PIHTLILDTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
+ T+ LDTTY N +FP +E + ++ E F+ I +G+E+L ++V
Sbjct: 145 SLSTIYLDTTYINCTREEFPSREVSSAEICNVLR-ELFDGSKPITIMVPKVGREQLLVDV 203
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
A + KI+V+ +F+V K L S ++FTT + + I WT R S
Sbjct: 204 AVEFKCKIWVDYIRFQVAKILGLS----EYFTTEKDGTFI-----WTCT---RRNIRSVL 251
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEFVK 697
Y F +I S R + +II E V YS+H S E+++F+
Sbjct: 252 YDEDFHVI--------------DLSMLRHIKPNSIIYDERMCYVEYSDHSSPNEIRDFLS 297
Query: 698 FVSPEHII 705
+S +I
Sbjct: 298 QLSFSRVI 305
>gi|444523044|gb|ELV13443.1| DNA cross-link repair 1A protein [Tupaia chinensis]
Length = 342
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 51/196 (26%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY-LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLIT 446
+ + P + +PGT F VDAF+Y + C+ +FLTHFH DHY GL+++F +YCS IT
Sbjct: 145 RKRTCPFYKKIPGTGFTVDAFQYGMVEGCTAYFLTHFHSDHYAGLSKNF-TCPVYCSEIT 203
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
L+ K+ + + LP++ + + GI V L+AN
Sbjct: 204 GNLLKNKLHMQEQYIHPLPMDTECVVNGIRVVLLDANQ---------------------- 241
Query: 507 FRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE-AIQAESFNPKTLF 565
YC+P Y FP Q+ VIQ I A +A + NP++L
Sbjct: 242 --------------------------YCSPEYTFPSQQEVIQSAINTAFEAVTLNPRSLV 275
Query: 566 LIGSYTIGKERLFLEV 581
+ G+Y+IGKE++FL +
Sbjct: 276 VCGTYSIGKEKVFLGI 291
Score = 43.1 bits (100), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
+PYSEH S+ E+K FV+++ P+ IIP+VN S M
Sbjct: 291 IPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGTWKSRQTM 329
>gi|393911301|gb|EFO27761.2| DNA ligase I [Loa loa]
Length = 500
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 118/227 (51%), Gaps = 25/227 (11%)
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV--------NMKIGIPWDRLQVLPLNQ 468
++FLTH H DHY + +++G IYCS +TA ++ + + GI + L LN
Sbjct: 25 YYFLTHAHSDHYAAVDNKWNNGPIYCSPVTAHILPIVTHRPRSKRAGIRSHLIHALDLNV 84
Query: 469 KTTIAGIDVTCLEANHCPGSIIILFEPQ--NGKAVLHTGDF----RFSEEMASMSVLQTC 522
+ G V L+ANH PGS++ LFE + +L TGDF R + + ++SVL+
Sbjct: 85 WHHMDGFSVMLLDANHVPGSVMFLFEGDKISEGPILFTGDFRADIRLYQNIFAVSVLRER 144
Query: 523 PIHTLILDTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
+ T+ LDTTY N +FP +E + ++ E F+ I +G+E+L ++V
Sbjct: 145 SLSTIYLDTTYINCTREEFPSREVSSAEICNVLR-ELFDGSKPITIMVPKVGREQLLVDV 203
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
A + KI+V+ +F+V K L S ++FTT + + I WT
Sbjct: 204 AVEFKCKIWVDYIRFQVAKILGLS----EYFTTEKDGTFI-----WT 241
>gi|367020838|ref|XP_003659704.1| hypothetical protein MYCTH_2052357 [Myceliophthora thermophila ATCC
42464]
gi|347006971|gb|AEO54459.1| hypothetical protein MYCTH_2052357 [Myceliophthora thermophila ATCC
42464]
Length = 903
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 91/183 (49%), Gaps = 21/183 (11%)
Query: 390 KDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
+ P + +PG VDAF+Y + G C +FL+HFH DHY GLT ++ HG IYCS +T
Sbjct: 400 RTCPFYKIMPGFFICVDAFRYGAVEG-CKAYFLSHFHSDHYMGLTANWTHGPIYCSKVTG 458
Query: 448 RLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEANHCPGSIIILFEPQNG---KAV 501
LV ++ + L + + G+ VT + ANHCPGS + LFE + +
Sbjct: 459 SLVKSQLKTAAKYVVELEFEETVLVPDTGGVTVTMIPANHCPGSSLFLFEKSAAGRTQRI 518
Query: 502 LHTGDFRF-----------SEEMASMSV-LQTCPIHTLILDTTYCNPLYDFPKQEAVIQF 549
LH GDFR E + ++S + I LDTTY NP Y P Q+ VI
Sbjct: 519 LHCGDFRACPAHVEHPKLRPETVDAVSGRTKQQKIDVCYLDTTYLNPRYSLPPQDDVITA 578
Query: 550 VIE 552
E
Sbjct: 579 CAE 581
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 42/202 (20%)
Query: 548 QFVIEAIQAESFNPKTLFLI-GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK 606
Q A+ +P L ++ G+Y+IGKER+ + +AR LR KIY + AK VL C
Sbjct: 644 QNAFTALDGRRHHPNRLLVVCGTYSIGKERICVAIARALRTKIYASPAK--VLMCRQLGD 701
Query: 607 EDI-QWFTTNEHESHIHVMPMWTLASFKRLKHMSN-QYAGRFSLIVAFSPTGWTF--SKG 662
++ T++ E+ +H+ + + + +++ + G+F I+ F P+GW + S G
Sbjct: 702 PELSSLLTSDPAEAQVHMQMLMEIRAETLAEYLEGYKVRGQFGRIIGFRPSGWNYRPSAG 761
Query: 663 KKKSPGRR---------------------W-----------QQGT---IIRYEVPYSEHC 687
K + G W Q+G+ ++ + VPYSEH
Sbjct: 762 KPGNGGSATIGANLPPTSLPTTELLHGPGWKTRFALKDLVPQRGSSREVLCFGVPYSEHS 821
Query: 688 SFTELKEFVKFVSPEHIIPSVN 709
F EL FV + E I+P+VN
Sbjct: 822 GFRELAMFVMALRIERIVPTVN 843
>gi|302832754|ref|XP_002947941.1| hypothetical protein VOLCADRAFT_120549 [Volvox carteri f.
nagariensis]
gi|300266743|gb|EFJ50929.1| hypothetical protein VOLCADRAFT_120549 [Volvox carteri f.
nagariensis]
Length = 869
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 63/97 (64%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
VPGT F VD F + CSH+FLTHFH DH GL +SF G IYCS +TARL+ +GI
Sbjct: 11 VPGTNFLVDGFAFKNPRCSHYFLTHFHSDHTVGLNKSFDGGVIYCSHVTARLLVHDMGIK 70
Query: 458 WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE 494
++ L + + G+ VT L+ANHCPGS++ LFE
Sbjct: 71 PQVVKPLAVGVAVMVQGVRVTPLDANHCPGSVMFLFE 107
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 20/174 (11%)
Query: 501 VLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ-AESF 559
+LHTGD R+ M L + TL+LDTTY P + P Q+ I +++ ++ A
Sbjct: 221 ILHTGDCRWQRWMRDQPGLAGVRVDTLLLDTTYAAPKHTLPPQQEAIAMMVQVMRDALVA 280
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
P+T+FL+ +Y IGKER FL A+ L +++ + AK +L+ LD E + + E+
Sbjct: 281 EPQTVFLVATYHIGKERAFLGAAQQLHARVWSSPAKRSLLRLLDLPAEHMALLVDDPREA 340
Query: 620 HIHVM-----------------PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG 656
+H+ P W L KR ++ G + V PTG
Sbjct: 341 MVHLTGWGLRPEDLRASCWLPRPGWGLKGAKRA--YLERHLGVWKQAVGIRPTG 392
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 657 WTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
WTF +G S R +G ++ VPYSEH S+T+L + V + P +IP+VN
Sbjct: 502 WTFRRGGGVSIRR---EGNVVVAGVPYSEHSSWTDLCDAVSQLRPRILIPTVN 551
>gi|145495220|ref|XP_001433603.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400722|emb|CAK66206.1| unnamed protein product [Paramecium tetraurelia]
Length = 441
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 137/287 (47%), Gaps = 46/287 (16%)
Query: 435 FHHGKIYCSLITARLVNMK-------IGIPWDRLQVLP-LNQKTTIA-----GIDVTCLE 481
+++GKIYCS IT + + K + + ++ + L L+Q+ T I+V
Sbjct: 5 WNYGKIYCSKITKQFILNKFPKIERIVALEFNHIYYLNVLSQELTDKLDDEFTIEVVLFS 64
Query: 482 ANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL-----QTCPIHTLILDTTYCNP 536
ANH PGS + LF G +LHTGDFRF+ M + + + + I LI D TYC+P
Sbjct: 65 ANHIPGSSMFLFRGYMG-TILHTGDFRFNRSMITDNPILFPNNEAIQIDELIFDNTYCDP 123
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
+++FP + V Q +I I+ N K LI +GKE + +E+ + + KI VN K+
Sbjct: 124 MFNFPTADIVAQQMINIIEN---NIKKRVLIAMGALGKEAIVMEICKYFKTKIIVNQEKY 180
Query: 597 RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQY--AGRFSLIVAFSP 654
L + S ++I FTT++ + W S + + + QY +G+ + I
Sbjct: 181 NQL--IASSTKNIDLFTTDKKGN-------WYYRSHR--EQILQQYIESGQQNFIC---- 225
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
F + P I Y VPYS H ++ E++ FV + P
Sbjct: 226 INTDFLMQSHRDPDG-------INYMVPYSLHSNYLEMRTFVNSIKP 265
>gi|432103989|gb|ELK30822.1| 5' exonuclease Apollo [Myotis davidii]
Length = 498
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN--MKI 454
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ +++
Sbjct: 6 IPHTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWAR-PLYCSPITAFLLHRHLQV 64
Query: 455 GIPWDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKRWIRALEVGESHVLPLDE-IGRETMTVTLMDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
F+ M L IHTL LD T CNP D P Q Q ++ I+
Sbjct: 123 FTPAMLKEPALSVGKQIHTLYLDNTNCNPALDLPSQHEAAQQIVALIR 170
>gi|261327452|emb|CBH10427.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 720
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 107/258 (41%), Gaps = 68/258 (26%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLN-------QKT 470
+FL+HFH DHY G+T + HG IY S T ++ K+G+ ++ L L +
Sbjct: 74 FFLSHFHSDHYSGITEKWSHGTIYASRATGNVLCWKLGVRRSCVECLDLAVTYIFSLRNG 133
Query: 471 TIAG------------IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASMS 517
+ G V + ANHCPG+++ LF + +LHTGDFRFS + ++S
Sbjct: 134 DLVGKEEGRAECGEGCFSVELIPANHCPGAVMFLFRSADFGTILHTGDFRFSSPAVPALS 193
Query: 518 VLQTC---------------PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-------- 554
+ C + L LD TYC P + FP + A+ Q V + +
Sbjct: 194 IKHRCWEPDLRSNPVLKSMGNVDVLFLDNTYCQPQFTFPDRAAIFQTVNKEVLDMIMECE 253
Query: 555 --------------QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK-----------I 589
+ E ++GSY IGKE + L V K I
Sbjct: 254 RRLSYSQSQEHMQTKEEGQTVSVAVMVGSYFIGKEIIALSVQENFPSKKSGDGAPAYAPI 313
Query: 590 YVNAAKFRVLKCLDFSKE 607
YV ++ ++ LD+ E
Sbjct: 314 YVTPERYEAMRQLDYFPE 331
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ +PTGW ++K R + +PYSEHC F+EL +FV+FV+P +
Sbjct: 461 QFDGVLFVNPTGWAAKVSRQKINER------VSLLNIPYSEHCCFSELIDFVEFVNPALV 514
Query: 705 IPSVNNDG 712
+P+V+ +
Sbjct: 515 VPTVSKEA 522
>gi|308805462|ref|XP_003080043.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
gi|116058502|emb|CAL53691.1| Predicted hydrolase involved in interstrand cross-link repair (ISS)
[Ostreococcus tauri]
Length = 517
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 149/344 (43%), Gaps = 64/344 (18%)
Query: 418 WFLTHFHMDHYQGL-TRSFH----HGKIYCSLITARLVNMKIGIPWDRLQVLPLNQK--- 469
+FLTH H DH GL R + +IYC IT ++ K ++ L N+
Sbjct: 35 YFLTHAHADHVVGLGARRWSPETLGARIYCDEITREILVSKWPTLGRHVKALERNRGHGV 94
Query: 470 --TTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV---LQTCPI 524
T I+VT ++A HCPGS+++ E NG+ V HTGDFR + +A ++ + P+
Sbjct: 95 RLTRETTIEVTLIDAGHCPGSVVVCVEGPNGRLV-HTGDFRREDWIAREALPRAMTRAPV 153
Query: 525 HTLILDTTYCNPLYDFPKQ----EAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLE 580
L LD TYC+P + FP + E +++F + NP ++G ++GKE L +
Sbjct: 154 DYLFLDNTYCHPKHAFPGRAEATEDIVRFCVS-------NPGRAIVLGIDSLGKEDLVIA 206
Query: 581 VARVLRKKIYVNAAKF------------RVLKCLDFSKEDIQWFTTNEHESHI------H 622
V+ + + + +F R + +F + + +H+ H
Sbjct: 207 VSEAIGAPVEIPDERFLPSSYTRFLTGHRACERENFIRRSMNESLDVTRRTHVRCVPKQH 266
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK------KSPGRRWQQGTI 676
V P A K L+H + +A PTGW+ + ++ P ++
Sbjct: 267 VRPSTLRALVKGLRHDD-------APPLAILPTGWSAIERQRGEGAGVSGPSEHDPIDSV 319
Query: 677 IRYE--------VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDG 712
+ ++ VPYS H + EL+ FV+ + P + + D
Sbjct: 320 VEFDDEAGRIVAVPYSLHAPYDELEAFVRALRPACVFGNTRVDA 363
>gi|301611547|ref|XP_002935298.1| PREDICTED: protein artemis-like [Xenopus (Silurana) tropicalis]
Length = 697
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 161/348 (46%), Gaps = 56/348 (16%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL F ++ YCS +T L+ N K
Sbjct: 16 IDRFDRENLSARAYFLSHCHKDHMKGLRAPFLKRRLQNSLKVHLYCSPVTKELLLTNPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + ++ T I+ +D VT L A HCPGS++ LF+ +G VL+T
Sbjct: 76 AFWENRMISIEIDTPTQISLVDEATGYKEDVVVTLLPAGHCPGSVMFLFQGNSG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAKGEVARMELLHSGNRVKDIESVYLDTTFCDPKYYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ K++VN K + K + +I T +
Sbjct: 195 TLSPFHVVWLNCKAAYGYEYLFTNLSEEFGAKVHVN--KLDMFKNM----PEILSHITTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFS------LIVAFSPTGWTFSKGKKKSPGRR 670
+ IH F R M G FS +++ P+ F + +++
Sbjct: 249 RRTQIHACRHPVNEEFTRANRMP---CGMFSDDGIPLHVISIKPSTIWFGERTRRT---- 301
Query: 671 WQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
I+R Y +S H S++E+K+F+ ++ P ++ +V G+
Sbjct: 302 ---NVIVRTGESSYRACFSFHSSYSEIKDFLGYIKPMNVYANVIPMGK 346
>gi|378733176|gb|EHY59635.1| non-specific serine/threonine protein kinase [Exophiala
dermatitidis NIH/UT8656]
Length = 959
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 98/196 (50%), Gaps = 35/196 (17%)
Query: 383 QSKGRK--HKDIPTWCCVPGTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGK 439
QS+G+ + P + +PG VDAF+Y + + + +FL+HFH DHY GLT S+ HG
Sbjct: 478 QSRGKPAYQRTCPFYKIMPGMFICVDAFRYGKVEGQNAYFLSHFHSDHYIGLTSSWCHGP 537
Query: 440 IYCSLITARLV--NMKIGIPWDRLQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIIL 492
IY S +T L+ +K+ W V+PL + + G+ VT + ANHCPGS + L
Sbjct: 538 IYASKVTCNLMVQQLKVDPKW----VVPLEFEKKVEVPNTKGVYVTMIPANHCPGSSLYL 593
Query: 493 FEPQNGK---------AVLHTGDFRFSEEMASMSVL----------QTCP--IHTLILDT 531
FE GK +LH GDFR + +L QT I T LDT
Sbjct: 594 FEKVVGKNKDGSPRLTRILHCGDFRACPAHVTHPLLRPDVVDSITGQTKQQIIDTCYLDT 653
Query: 532 TYCNPLYDFPKQEAVI 547
TY P Y FP Q VI
Sbjct: 654 TYLTPKYSFPSQHDVI 669
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 87/172 (50%), Gaps = 26/172 (15%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+ L +IG+Y+IGKER+ L +AR L KIY +K R+ CL+ + + + T + E+ +
Sbjct: 743 RLLVVIGTYSIGKERICLGIARALDSKIYAPPSKMRICACLEDEELNAR-LTRDPLEAQV 801
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTF------------------SKGK 663
H+ + + + ++MS+ + G F+ +V F PTGW++ S G
Sbjct: 802 HMQTLMEIRAETLHEYMSS-FKGHFARVVGFRPTGWSYRPPTSRFTENPAVSTVLHSDGW 860
Query: 664 KKSPGRR---WQQGTIIR---YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
K R Q+G+ + VPYSEH SF EL F + I+P+VN
Sbjct: 861 KTRYSMRDLAPQRGSTRESNCFGVPYSEHSSFRELTMFCCALRINRIVPTVN 912
>gi|118356261|ref|XP_001011389.1| hypothetical protein TTHERM_00433640 [Tetrahymena thermophila]
gi|89293156|gb|EAR91144.1| hypothetical protein TTHERM_00433640 [Tetrahymena thermophila
SB210]
Length = 492
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 137/301 (45%), Gaps = 48/301 (15%)
Query: 421 THFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA------- 473
T+ DHY+GL+ + + IYCS I+ L+ K + L LN K
Sbjct: 6 TNLIKDHYEGLSPLWDYSPIYCSEISKNLILQKYP-KIQNIHALQLNTKYEFTLNNIESL 64
Query: 474 GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS-----------MSVLQTC 522
++V +A+H PGS++ILF+ G + HTGDFRF++ M LQ C
Sbjct: 65 KVEVWFFDAHHIPGSVMILFKGYMG-TIFHTGDFRFNQSMIDCNPILFPPELRTKNLQNC 123
Query: 523 PIHT--LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLE 580
I +I D TYCNP ++FP+ + V + ++E I+ N + L +G+ +GKE + ++
Sbjct: 124 SIQIDEMIYDNTYCNPAFNFPRGDEVFKRMVEIIEKNR-NKRVLIAMGA--LGKEDICIK 180
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSN 640
++ + + + + K + + DI FTT+ + I ++ + +H
Sbjct: 181 LSEYFQTLLIIGES-----KAIGTYRTDI--FTTDRDQGFIEII---------KKRHREQ 224
Query: 641 QYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVS 700
+ SL F F K P I Y VPYS H +F E++ VK +S
Sbjct: 225 KIQEFKSLNYDFIVITTDFLMLDHKDPDG-------INYMVPYSLHSNFKEMECLVKAIS 277
Query: 701 P 701
P
Sbjct: 278 P 278
>gi|395539074|ref|XP_003771498.1| PREDICTED: protein artemis [Sarcophilus harrisii]
Length = 692
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 42/336 (12%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ N +
Sbjct: 16 IDRFDRQNLTARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVHLYCSPVTKELLLTNSRY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ L + T I+ ID VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 SFWEKRIIALEIETPTQISLIDEASGEKEEVVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M L + I ++ LDTT+C+P Y P + + ++E +++
Sbjct: 135 GDFRLAKGEAARMEFLHSGNRVKDIQSVYLDTTFCDPKYYQIPSRMECLNGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +++VN K + K + DI + T +
Sbjct: 195 TLSPYHIVWLNCKAAYGYEYLFTNLSEEFGTQVHVN--KLDMFKNM----PDILYHLTTD 248
Query: 617 HESHIHVMPMWTLASF---KRLKHMSNQYAGRFSLIVAFSP-TGWTFSKGKKKSPGRRWQ 672
+ IH + F RL G I++ P T W + +K + R
Sbjct: 249 RHTQIHACRHPRVEEFFRGNRLPCGITSKNGTPLHIISIKPSTMWFGERTRKTNVIMRTG 308
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 309 ESS---YRACFSFHSSYSEIKDFLSYIRPVNVYPNV 341
>gi|72387748|ref|XP_844298.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359450|gb|AAX79887.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70800831|gb|AAZ10739.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 720
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 105/258 (40%), Gaps = 68/258 (26%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPL----------- 466
+FL+HFH DHY G+T + HG IY S T ++ K+G+ ++ L L
Sbjct: 74 FFLSHFHSDHYSGITEKWSHGTIYASRATGNVLCWKLGVRRSCVECLDLAVTYIFSLRNG 133
Query: 467 --------NQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASMS 517
+ V + ANHCPG+++ LF + +LHTGDFRFS + ++S
Sbjct: 134 DLVKKEEGRAECGEGCFSVELIPANHCPGAVMFLFRSADFGTILHTGDFRFSSPAVPALS 193
Query: 518 VLQTC---------------PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-------- 554
+ C + L LD TYC P + FP + A+ Q V + +
Sbjct: 194 IKHRCWEPDLRSNPVLKSMGNVDVLFLDNTYCQPQFTFPDRAAIFQTVNKEVLDMIMGCE 253
Query: 555 --------------QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK-----------I 589
+ E ++GSY IGKE + L V K I
Sbjct: 254 RRLSYSQSQEHMQTKEEGQTVSVAVIVGSYFIGKEIIALSVQENFPSKKSGDGAPAYAPI 313
Query: 590 YVNAAKFRVLKCLDFSKE 607
YV ++ ++ LD+ E
Sbjct: 314 YVTPERYEAMRQLDYFPE 331
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ +PTGW ++K R + +PYSEHC F+EL +FV+FV+P +
Sbjct: 461 QFDGVLFVNPTGWAAKVSRQKINER------VSLLNIPYSEHCCFSELIDFVEFVNPALV 514
Query: 705 IPSVNNDG 712
+P+V+ +
Sbjct: 515 VPTVSKEA 522
>gi|170594001|ref|XP_001901752.1| DNA ligase I [Brugia malayi]
gi|158590696|gb|EDP29311.1| DNA ligase I, putative [Brugia malayi]
Length = 608
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 50/310 (16%)
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI--------GIPWDRLQVLPLNQ 468
++FLTH H DHY + +++G IYCS +TA ++ + GI + L LN
Sbjct: 25 YYFLTHAHSDHYGAIDNKWNNGNIYCSPVTAHVLPIVTQRHKSKFGGIRSHIIHALDLNV 84
Query: 469 KTTIAGIDVTCLEANHCPGSIIILFEPQ--NGKAVLHTGDFR----FSEEMASMSVLQTC 522
+ G V L+ANH PGS++ LFE + +L TGDFR + + + SVL+
Sbjct: 85 WHYMDGFSVMLLDANHIPGSVMFLFEGDRISEGRILFTGDFRADIQLYKNVLTASVLRER 144
Query: 523 PIHTLILDTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
+ T+ LDTTY N +FP + A + ++ + F+ I +G+E+L ++V
Sbjct: 145 NLSTIYLDTTYINCTREEFPSRGASSAEMCNVLR-KLFDGSKSVTIMVPKVGREQLLVDV 203
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA--SFKRLKHMS 639
A + KI+V+ +F+V L S ++FTTN+ E+ I WT + + +
Sbjct: 204 AIEFKCKIWVDYIRFQVAGILGLS----EYFTTNKKETSI-----WTCTRQDIRSVFYDP 254
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEF 695
N Y S++ P +II E + YS+H S E+++F
Sbjct: 255 NVYVIDVSMLQYIKP-------------------NSIINDERMCYIEYSDHSSPNEIRDF 295
Query: 696 VKFVSPEHII 705
+ +S +I
Sbjct: 296 LSQLSFSKVI 305
>gi|353240561|emb|CCA72425.1| hypothetical protein PIIN_06361 [Piriformospora indica DSM 11827]
Length = 589
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 94/193 (48%), Gaps = 23/193 (11%)
Query: 369 SFSGSDRKKHAAKDQSKGR-KHKDIPTWCCVPGTPFRVDAFKYLR-GDCSHWFLTHFHMD 426
S SG + K + + G + P + + G P VDAF+Y + + + LTH H D
Sbjct: 361 SDSGETKNKSTNQASTSGNVARRPAPFYKVMQGMPIAVDAFRYGKIPGVTAYLLTHAHSD 420
Query: 427 HYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI---AGIDVTCLEAN 483
HY L+ S+ HG IYCS TA LV + + + LP++ K + G+ VT ++AN
Sbjct: 421 HYTNLSASWKHGPIYCSETTANLVIHMLNVDPKWVHPLPMDTKVELPDTGGVTVTLIQAN 480
Query: 484 HCPGSIIILFEPQN--------------GKA----VLHTGDFRFSEEMASMSVLQTCPIH 525
HCPGS + LFE + G A LH GDFR + S ++Q +
Sbjct: 481 HCPGSCLFLFEGKQTVNAGDSSFHSAFVGTARVFRYLHCGDFRACPKHVSHPMIQGKRLD 540
Query: 526 TLILDTTYCNPLY 538
+ LDTTY +P +
Sbjct: 541 LIYLDTTYLDPKF 553
>gi|117306469|gb|AAI25278.1| Dclre1b protein [Mus musculus]
Length = 459
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 119/237 (50%), Gaps = 27/237 (11%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM-ASMSVLQTCPIHTLILDTTY 533
+ VT ++ANHCPGS++ LFE G +L+TGDFR++ M +++ IHTL LD T
Sbjct: 8 MTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALILGKQIHTLYLDNTN 66
Query: 534 CNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNA 593
CNP P ++ Q +++ I+ P+ IG Y++GKE L ++A R + ++
Sbjct: 67 CNPALVLPSRQEATQQIVQLIRQ---FPQHNIKIGLYSLGKESLLEQLALEFRTWVVLSP 123
Query: 594 AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
+ +++ L + D+ FT E IH + + H + + +A
Sbjct: 124 QRLELVQLLGLA--DV--FTVEEEAGRIHAV------DHTEICHSAMLQWNQSHPTIAIF 173
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
PT K +SP +I Y VPYS+H S++EL+ FV + P ++P V+
Sbjct: 174 PTS-----RKVRSP-----HPSI--YTVPYSDHSSYSELRAFVAALRPCQVVPIVHQ 218
>gi|407404385|gb|EKF29862.1| hypothetical protein MOQ_006337 [Trypanosoma cruzi marinkellei]
Length = 694
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 100/235 (42%), Gaps = 68/235 (28%)
Query: 415 CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA- 473
C +FL+HFH DHY G+T ++HG IY S TA ++ ++GIP R++ + T +
Sbjct: 46 CVLFFLSHFHSDHYNGITEGWNHGIIYASRGTANILCWRLGIPDSRVKRMDFCVTYTFSL 105
Query: 474 ---------------------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
VT + A HCPGS++ LF VLHTGDFRF++E
Sbjct: 106 KNGALLYETAWNEEDWRCSDDFFSVTLVPAGHCPGSVMFLFRSPVFGTVLHTGDFRFTQE 165
Query: 513 MASMSVLQTCP-----------------------IHTLILDTTYCNPLYDFPKQEAVIQF 549
+ +L P + L LD T+C+ ++FP + ++
Sbjct: 166 QPTSCLLPHVPRMPKFQKEIDMTTNPILNSVAGKVDVLFLDNTFCDERFNFPSRADSLRE 225
Query: 550 VIEAI-----------------------QAESFNPKTLFLIGSYTIGKERLFLEV 581
V EAI +A+ LIG+Y IGKER+ L +
Sbjct: 226 VNEAILSMFREHTSSLQGVDKETSARGHEAKENAVSVAVLIGTYFIGKERIALSI 280
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ PTGWT K +++ +R + VPYSEH SFTEL +FV F++P I
Sbjct: 441 QFDGVLCVEPTGWT-RKVRRQILSKR-----VTLLHVPYSEHSSFTELVDFVGFMNPARI 494
Query: 705 IPSVN 709
+P+V+
Sbjct: 495 VPTVS 499
>gi|407851008|gb|EKG05145.1| hypothetical protein TCSYLVIO_003789 [Trypanosoma cruzi]
Length = 681
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 115/280 (41%), Gaps = 79/280 (28%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---- 473
+FL+HFH DHY G+T ++HG IY S TA ++ ++GIP R++ + T +
Sbjct: 49 FFLSHFHSDHYNGITGGWNHGTIYASRGTANILCWRLGIPESRVKRMDFCVTYTFSLKNG 108
Query: 474 ------------------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
VT + A HCPGS++ LF VLHTGDFRF+ E +
Sbjct: 109 ALLYETTWEEEEWRCSDEFFSVTLIPAGHCPGSVMFLFRSPVFGTVLHTGDFRFTREQPN 168
Query: 516 MSVLQTCP-----------------------IHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
S+L P + L LD T+C+ ++FP + ++ V +
Sbjct: 169 SSLLPHVPRMPHFQKEIDMMANPVLKSIAGKVDVLFLDNTFCDERFNFPSRADSLREVNQ 228
Query: 553 AI-----------------------QAESFNPKTLFLIGSYTIGKERLFLEV-------- 581
AI +A+ +IG+Y IGKER+ + +
Sbjct: 229 AILSVFRDHTSSLQGVTQEMTARGHEAKEHAISVAVIIGTYFIGKERIAVSIQENFLPLG 288
Query: 582 ---ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
+ + YV+ K+ L+ L++ +E E E
Sbjct: 289 TEDSTCIVVPTYVSPEKYESLRQLEYYREHFMALPRREGE 328
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ P+GWT K +++ +R + VPYSEH SFTEL +FV F++P I
Sbjct: 441 QFDGVLCVEPSGWT-RKARRQILSKR-----VTLLHVPYSEHSSFTELVDFVGFMNPTRI 494
Query: 705 IPSVN 709
+P+V+
Sbjct: 495 VPTVS 499
>gi|290977182|ref|XP_002671317.1| hypothetical protein NAEGRDRAFT_59473 [Naegleria gruberi]
gi|284084885|gb|EFC38573.1| hypothetical protein NAEGRDRAFT_59473 [Naegleria gruberi]
Length = 739
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 31/249 (12%)
Query: 466 LNQKTTIAGID-----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ 520
+NQ T+ D V ++ANHCPGSI+ L E G VL TGDFR+ + +
Sbjct: 134 MNQALTVYDKDTSYMQVNIIDANHCPGSIMFLLEGYFGN-VLFTGDFRYDARILQAPCFR 192
Query: 521 TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLE 580
I L LD T+ + +YDFP ++ + VI I+ S T LI +GKE L L
Sbjct: 193 DKKIDHLYLDDTFLDKMYDFPTRQEAGKQVISVIK--SLPDTTHILIAVDHLGKEELMLA 250
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV-----MPMWTLASFKRL 635
+A + I V ++ +L+C++ I FT + + I V + M ++ KR+
Sbjct: 251 LATTFQTLIVVPEERYELLECMN-DIIPIDLFTCDPKQGRIFVKSKKEVNMRSIIEHKRI 309
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEF 695
+ V P+GW S + K P + + Y VPYS H S++E+ EF
Sbjct: 310 FGATT---------VGIIPSGW--SSAQLKDPTSQ------LIYRVPYSLHSSYSEIIEF 352
Query: 696 VKFVSPEHI 704
V + P+++
Sbjct: 353 VSTLKPKNV 361
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
+P TP VD FKY+ G C + LTH H DH GLT S+++G I+CS IT RL+
Sbjct: 4 LPNTPIIVDEFKYIPG-CFIYLLTHLHTDHTGGLTPSWNNGIIFCSEITKRLL 55
>gi|15029751|gb|AAH11094.1| Dclre1b protein [Mus musculus]
gi|74210373|dbj|BAE23379.1| unnamed protein product [Mus musculus]
Length = 452
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 117/237 (49%), Gaps = 27/237 (11%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP-IHTLILDTTY 533
+ VT ++ANHCPGS++ LFE G +L+TGDFR++ M L IHTL LD T
Sbjct: 1 MTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALILGKQIHTLYLDNTN 59
Query: 534 CNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNA 593
CNP P ++ Q +++ I+ P+ IG Y++GKE L ++A R + ++
Sbjct: 60 CNPALVLPSRQEATQQIVQLIRQ---FPQHNIKIGLYSLGKESLLEQLALEFRTWVVLSP 116
Query: 594 AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
+ +++ L + D+ FT E IH + + H + + +A
Sbjct: 117 QRLELVQLLGLA--DV--FTVEEEAGRIHAV------DHTEICHSAMLQWNQSHPTIAIF 166
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
PT K +SP +I Y VPYS+H S++EL+ FV + P ++P V+
Sbjct: 167 PTS-----RKVRSP-----HPSI--YTVPYSDHSSYSELRAFVAALRPCQVVPIVHQ 211
>gi|390349305|ref|XP_781856.3| PREDICTED: protein artemis-like [Strongylocentrotus purpuratus]
Length = 389
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 159/337 (47%), Gaps = 57/337 (16%)
Query: 403 FRVDAFKYLRGDCSHWFLTHFHMDHYQGLT-RSFH-------HGKIYCSLITAR--LVNM 452
F+ DA RG +FL+H H DH GL+ + F H ++YCS +T L +
Sbjct: 19 FQGDAVLRARG----YFLSHCHTDHMVGLSSKKFADRLKCNPHIRLYCSEVTYEFLLTDD 74
Query: 453 KIGIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVL 502
K L LP+ Q +T+A ++ VT L A HCPGS++ LFE G VL
Sbjct: 75 KYKHLQASLSSLPIEQTSTVALVNEFNGQEEKLLVTLLPAGHCPGSVMFLFEGDQG-TVL 133
Query: 503 HTGDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNPLYDF-----PKQEAVIQFVIE 552
+TGDFR ++ E A M L + I ++ LDTT+C P + ++A++ V
Sbjct: 134 YTGDFRLAKGEAARMEPLHSGSRVKDIISVYLDTTFCVPEAMYIPSRGESKDALLDLVDS 193
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
I + + L Y G E LF+E+++ +KI+V ++K + +
Sbjct: 194 HISKSAGHMVKLNCKAKY--GYEYLFVELSKTFNQKIHVCDT---LMKQYNRVPDLCYHL 248
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSP-TGWTFSKGKKKSPGRRW 671
TT + IH + LK+ +N I++ +P T W + + R+
Sbjct: 249 TTEGSLTQIHACRYGPCS----LKNATN--------ILSITPSTMWFTGNARPEDVIRKV 296
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ RY + +S H SF+E+++F+ ++ P+H+ P+V
Sbjct: 297 GR----RYRLCFSFHSSFSEIRDFLGYIRPQHVYPNV 329
>gi|212274939|ref|NP_001130918.1| uncharacterized protein LOC100192022 [Zea mays]
gi|194690442|gb|ACF79305.1| unknown [Zea mays]
gi|413952237|gb|AFW84886.1| hypothetical protein ZEAMMB73_126664 [Zea mays]
Length = 229
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL--TRSFHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL + HG +YCS TARL+ ++ GI L
Sbjct: 8 VDKFS---GGSQAYFLTHLHQDHTRGLGAVGGWRHGPLYCSPTTARLLPIRFPGIDASLL 64
Query: 462 QVLPLNQKTTI----------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS- 510
+ L +I + VT + A HCPGS++ LF G +L+TGDFR+
Sbjct: 65 RPLAPGASASIYLFSPSSGQSLSLHVTAIPALHCPGSLMYLFRGDLG-CMLYTGDFRWEL 123
Query: 511 -------EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
+ + L I L LD TYC+P +FP + V + VI+ I++ +P
Sbjct: 124 GCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFPPRPVVAEQVIDIIRS---HPDH 180
Query: 564 LFLIGSYTIGKERLFLEVARVLRKK 588
+IG T+GKE L L ++R L+ K
Sbjct: 181 EVIIGVDTLGKEDLLLHISRALQTK 205
>gi|321261541|ref|XP_003195490.1| hypothetical protein CGB_G0680W [Cryptococcus gattii WM276]
gi|317461963|gb|ADV23703.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 833
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 101/225 (44%), Gaps = 42/225 (18%)
Query: 364 SGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLT 421
SG ++ D + +D + + P + + G P VDAF+Y + G + + LT
Sbjct: 297 SGHKEHEQWKDVEADLRRDGKRFAGRRRAPFYKVLTGMPVAVDAFRYGAIPG-VTAYLLT 355
Query: 422 ------------------HFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV 463
H H DHY L++S+++G IYCS TA L+ + + +
Sbjct: 356 YVISINFTLLSQLTEKNRHAHSDHYTNLSKSWNNGPIYCSETTANLIIHMLEVDPKWVHG 415
Query: 464 LPLN---QKTTIAGIDVTCLEANHCPGSIIILFE--------------PQNGKA----VL 502
LP + + G+ VT +EANHCPGS I LFE P G L
Sbjct: 416 LPNDVPFEMPNTGGVTVTPIEANHCPGSSIFLFEGRQTVNAGDSGFASPYVGSKRVFRYL 475
Query: 503 HTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI 547
H GDFR + +M + PI+T LDTTY NP Y FP Q VI
Sbjct: 476 HCGDFRANPQMVLHPAIARAPINTCYLDTTYLNPKYCFPPQPLVI 520
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 24/157 (15%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+TL ++G+Y+IGKER+ +A+ + KIY + K +L C E T++ E+ +
Sbjct: 623 RTLVVVGTYSIGKERIVKAIAKAIGSKIYCDQRKKGILLC-QTDPELHSMLTSDPIEAQV 681
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGK------------KKSPGR 669
H++P+ + RL+ F ++ F PTGW++S ++ R
Sbjct: 682 HLLPLGNI-QLDRLQSYLTLLYPHFDRVLGFRPTGWSYSPPAGTDMLPDVNTVIRRDQAR 740
Query: 670 RWQQGTI----------IRYEVPYSEHCSFTELKEFV 696
R+ +G + + Y VPYSEH SF EL F
Sbjct: 741 RFGEGDLKTMRGSSRNFMMYGVPYSEHSSFFELTCFA 777
>gi|22023557|gb|AAM89124.1| SNM1-like protein [Rattus norvegicus]
Length = 697
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 159/340 (46%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T ++ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 KFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E++ M +L + I ++ LDTT+C+P Y P +E ++ V+E +++
Sbjct: 135 GDFRLAKGEVSRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVLELVRSWI 194
Query: 558 SFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +PK ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 195 TRSPKHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLI---VAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + A + + ++ P+ F + +K+
Sbjct: 249 RNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTMWFGERTRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|449505918|ref|XP_004174915.1| PREDICTED: DNA cross-link repair 1A protein [Taeniopygia guttata]
Length = 946
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 127/273 (46%), Gaps = 42/273 (15%)
Query: 348 GSITNVKKVSTPTNGQSGSRKSFSGSDR------KKHAAKDQSKGRKHKDIPTWCCVPGT 401
GS+ +V+ V+ ++ SG R K+ + RKH P + +PGT
Sbjct: 571 GSVGDVEAVTESSSKNEAVADVRSGGQRRWRKKFKELPTTGEEPRRKH--CPFYKKIPGT 628
Query: 402 PFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS-----LITARLVNMKI 454
F VDAF+Y + G C+ +FLTHFH DHY GLT++F IYC+ +T +
Sbjct: 629 GFTVDAFQYGEIEG-CTAYFLTHFHSDHYSGLTKNFRF-PIYCNKKFKEFLTTVKSQEEK 686
Query: 455 GIPWDR-LQVLPLNQKTTI---------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
P+ R QV Q +G +T ++ G P N V T
Sbjct: 687 HCPFTRKYQVRGSGQAVDAFQYGEIEAGSGYFITHGPSHRDRGFTSKFRSPINCNKV--T 744
Query: 505 GDFRFSEEMASMSVLQTCPIHT---------LILDTT-YCNPLYDFPKQEAVIQFVIE-A 553
G+ S+ + P+ T L+LD YC+P Y FP Q+ VIQF + A
Sbjct: 745 GNLVKSKLRVQEQYVHVLPMDTQCVVNGIKVLLLDANQYCSPEYTFPSQQEVIQFAVNIA 804
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFL--EVARV 584
+ + NP+TL + G+Y+IGKE++FL EVA +
Sbjct: 805 FETVTLNPRTLVVCGTYSIGKEKVFLGPEVAEI 837
>gi|162135927|ref|NP_671486.2| protein artemis [Rattus norvegicus]
gi|71153328|sp|Q5XIX3.1|DCR1C_RAT RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=SNM1-like protein
gi|54035286|gb|AAH83546.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae) [Rattus
norvegicus]
Length = 698
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 159/340 (46%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSMKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T ++ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 KFWENRIIAIEIETPTQVSLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E++ M +L + I ++ LDTT+C+P Y P +E ++ V+E +++
Sbjct: 135 GDFRLAKGEVSRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVLELVRSWI 194
Query: 558 SFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +PK ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 195 TRSPKHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLI---VAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + A + + ++ P+ F + +K+
Sbjct: 249 RNTQIHACRHPKAEEYFQWNKLPCGMASKTKTVLHTISIKPSTMWFGERTRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|449273909|gb|EMC83252.1| Protein artemis, partial [Columba livia]
Length = 636
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 142/306 (46%), Gaps = 36/306 (11%)
Query: 439 KIYCSLITARLV--NMKIGIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCP 486
K+YCS +T L+ + K + + L + T I+ +D VT L A HCP
Sbjct: 5 KLYCSPVTKELLLTSRKYKFWENHIVALEVETPTQISLVDETSGEKEDIEVTLLPAGHCP 64
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDF 540
GS++ LFE G VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y
Sbjct: 65 GSVMFLFEGDKG-TVLYTGDFRLAKGEAARMELLHSGTGVKDIQSVYLDTTFCDPKFYHI 123
Query: 541 PKQEAVIQFVIEAIQA-ESFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FR 597
P +E + ++E +++ S P ++L G E LF+ ++ L K++VN FR
Sbjct: 124 PSREECLNGILELVRSWTSLTPYHVVWLNCKAAYGYEYLFINLSEELGIKVHVNKLDMFR 183
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKH----MSNQYAGRFSLIVAFS 653
+ DI + T + + IH + R M+ Q +I
Sbjct: 184 NMP-------DILYHITTDRHTQIHACRHPRDEEYVRGNRLPCGMTCQNGTPLHIISIKP 236
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
T W + KK + R + T Y +S H S++E+K+F+ ++ P ++ P+V G
Sbjct: 237 STMWFGERMKKTNVIVRTGETT---YRACFSFHSSYSEIKDFLSYICPVNVYPNVLPVGG 293
Query: 714 DSANAM 719
AM
Sbjct: 294 TEDKAM 299
>gi|403284555|ref|XP_003933631.1| PREDICTED: 5' exonuclease Apollo [Saimiri boliviensis boliviensis]
Length = 593
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 129/267 (48%), Gaps = 32/267 (11%)
Query: 463 VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC 522
VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR++ M L
Sbjct: 140 VLPLDE-IGRETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALTLG 197
Query: 523 P-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
IHTL LD T CNP P ++ +++ I+ +P+ IG Y++GKE L ++
Sbjct: 198 KQIHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKIGLYSLGKESLLEQL 254
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
A + + ++ + +++ L + D+ FT E IH + + H +
Sbjct: 255 ALEFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAV------DHMEICHSNML 304
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
+ + +A PT R+ + + +PYS+H S++EL+ FV + P
Sbjct: 305 HWNQTHPTIAILPT------------SRKIRSSHPDIHVIPYSDHSSYSELRAFVAALKP 352
Query: 702 EHIIPSVNNDG----RDSANAMVSLLL 724
++P V+ +DS + VS+ L
Sbjct: 353 CEVVPIVSRQPCGGFQDSLSPRVSVPL 379
>gi|428176829|gb|EKX45712.1| hypothetical protein GUITHDRAFT_71213, partial [Guillardia theta
CCMP2712]
Length = 165
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 87/151 (57%), Gaps = 30/151 (19%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLIT------------ARLVNMKIGIPWDRLQVLP 465
+FLTH H DH QGL + G IYCS ++ R+V M+IG+P ++L
Sbjct: 28 FFLTHMHADHTQGLHSEWDEGMIYCSQVSRSLLLDKFDVDPVRVVAMEIGVP----KLLR 83
Query: 466 LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM----ASMSVLQT 521
L+ + VTC++ANHCPG+++ FE Q+ + +LHTGDFR S M + +++ +
Sbjct: 84 LDT------VKVTCIDANHCPGAVMFYFETQDIR-LLHTGDFRLSPAMIREDSPLAMARD 136
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
C L++D TYC+P + FP Q+ Q ++E
Sbjct: 137 C---HLVVDNTYCDPKHTFPSQQEAGQRILE 164
>gi|311705699|gb|ADQ01115.1| artemis [Cercopithecus wolfi]
Length = 692
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P T++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHTVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|238879282|gb|EEQ42920.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 822
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 157/388 (40%), Gaps = 131/388 (33%)
Query: 405 VDAFKYLRGDC-SHWFLTHFHMDHYQGLTR-------------------------SFHHG 438
VDAF + D + +FLTHFH DHY G+++ S +
Sbjct: 260 VDAFCFAPHDTINQYFLTHFHADHYGGISKKWAYERVFGNDEDAFNNQTFDFDDDSIYKK 319
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA------------------------- 473
IYC+ IT RL+ ++ I ++ L L+ + I
Sbjct: 320 IIYCTGITGRLLTLRYSIDPRFIKHLELDTRYKIKSYTEKEDDEEEEEEEEEEMESNDMT 379
Query: 474 -GIDVTCLEANHCPGSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVLQTC------ 522
G+ VT + ANHCPG+ I LFE +LH GDFR + E+ + +L+
Sbjct: 380 PGLYVTPITANHCPGAAIFLFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHSK 439
Query: 523 -----PIHTLILDTTYCNPLYDFPKQEAVIQFVI----EAIQAE---------------- 557
I + LDTTY +P ++ PKQE V + + + IQ E
Sbjct: 440 NNLLQSIDKVYLDTTYMSPKHNLPKQELVCEIMANLFQDLIQQERNKDEQKQTTSNLFSN 499
Query: 558 ---SFN------------------------PKTLFLIGSYTIGKERLFLEVARVLRK-KI 589
+F K L +IG+Y IGKE+L + +++ L I
Sbjct: 500 WFGNFTQSRITDFCTTSSTSKNGLTRPIRKKKFLIVIGTYIIGKEKLAISISKRLNNCLI 559
Query: 590 YVNAA-----KFRVLK---------CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
Y+++ KF + K + KE TN+ + IH++PM +++ + L
Sbjct: 560 YLSSIGSRKDKFEIFKTYKNDYLNSVMTIEKEFGNINDTNDSDCMIHLVPMTLVSNNEEL 619
Query: 636 -KHMS-NQYAGRFSLIVAFSPTGWTFSK 661
K+ + N+Y F + PTGW++SK
Sbjct: 620 SKYFNHNKYYQFFERCIGLCPTGWSYSK 647
>gi|311705697|gb|ADQ01114.1| artemis [Hylobates agilis]
Length = 692
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 157/341 (46%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGI 456
+D F +FL+H H DH +GL ++ YCS +T L+
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 457 PWDRLQVLPLN--QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ + +++P+ T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF+ ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFINLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ ++ IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRDTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|357115401|ref|XP_003559477.1| PREDICTED: uncharacterized protein LOC100844720 [Brachypodium
distachyon]
Length = 662
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 102/223 (45%), Gaps = 38/223 (17%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL---------- 449
G P VD + H FLTH H DH G+T + +Y S +T +
Sbjct: 8 GLPIAVDTWTPASALKRHRFLTHAHRDHLTGVTTTSSGAAVYASRLTILIVRHIFPQLGP 67
Query: 450 ---VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
V M++G P VL + K VT +ANHCPG+++ LFE G VLHTGD
Sbjct: 68 DVFVEMELGTP-----VLVQDPK---GDFTVTAFDANHCPGAVMFLFEGTFGN-VLHTGD 118
Query: 507 FRFSEEM--------------ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
R + + S V +C I L LD T+ FP +EA I+ VI
Sbjct: 119 CRLTPDCIQGLPLRYINAKGSGSSQVPPSCRIDYLFLDCTFARCPLRFPTKEASIRQVIN 178
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK 595
I E N T++L+ S +G+E + +EV+R KIYV+ K
Sbjct: 179 CIW-EHPNAPTVYLV-SDMLGQEEILIEVSRAFGSKIYVDKDK 219
>gi|345483403|ref|XP_003424812.1| PREDICTED: protein artemis-like [Nasonia vitripennis]
Length = 396
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 149/354 (42%), Gaps = 52/354 (14%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH------GKIYCSLITARLVN 451
+PG +D F + S +FL+H H DH +GL F H +YCS IT +V
Sbjct: 11 IPGIS--IDRFDGDNLNSSAFFLSHGHTDHMKGLNYDFFHFLKRKDSFLYCSHITKLIVE 68
Query: 452 MK-------------IGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNG 498
K I I D L V+ T I VTC+ + HCPGS++ L +
Sbjct: 69 NKFPKFDRCIIEKHLIQINIDELNVINYVHCGTQVSITVTCVPSGHCPGSVMFLLNFGD- 127
Query: 499 KAVLHTGDFRFS-EEMASMSVL------QTCP--IHTLILDTTYCNP--------LYDFP 541
K +L+TGDFR S E+++ + L Q P I + LDTT+ + L
Sbjct: 128 KRILYTGDFRISIEDISKLKSLHYTTNSQRLPLQIDKIYLDTTFLDVDFQILPSRLDSLK 187
Query: 542 KQEAVIQFVIEAIQAESFNPKTLFLIG-SYTIGKERLFLEVARVLRKKIYVNAAKFRVLK 600
K AV++ +E +PK + LI S G E L++E++++L K+I+V +RV
Sbjct: 188 KLAAVVKEWVEK------DPKNVVLIEFSAKYGSEFLYMELSKMLNKRIHVKDDLYRVYS 241
Query: 601 CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS 660
LD + T + IH + K+ L + S W
Sbjct: 242 RLDILANHV---TDIAESTSIHACMDKNASKKKKGLQCRPDVVQNNILTIIPSVMKWA-- 296
Query: 661 KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
GK S V YS H S+ E++ F+++ P + V+ DG D
Sbjct: 297 -GKDTSCIIEHDSIEAQTINVCYSTHASYREIEAFIQYFKPTEVFACVDKDGID 349
>gi|10434517|dbj|BAB14284.1| unnamed protein product [Homo sapiens]
Length = 443
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 113/241 (46%), Gaps = 37/241 (15%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP-IHTLILDTTY 533
+ VT L+ANHCPGS++ LFE G +L+TGDFR++ M L IHTL LD T
Sbjct: 1 MTVTLLDANHCPGSVMFLFEGYFG-TILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTN 59
Query: 534 CNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNA 593
CNP P ++ +++ I+ +P+ IG Y++GKE L ++A + + ++
Sbjct: 60 CNPALVLPSRQEAAHQIVQLIRK---HPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSP 116
Query: 594 AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL----- 648
+ +++ L + D+ FT E IH + HM ++
Sbjct: 117 RRLELVQLLGLA--DV--FTVEEKAGRIHAV-----------DHMETCHSNMLRWNQTHP 161
Query: 649 IVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+A PT R+ + +PYS+H S++EL+ FV + P ++P V
Sbjct: 162 TIAILPT------------SRKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQVVPIV 209
Query: 709 N 709
+
Sbjct: 210 S 210
>gi|356991244|ref|NP_001239351.1| protein artemis [Papio anubis]
gi|311705721|gb|ADQ01126.1| artemis [Papio anubis]
Length = 687
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPMNAYPNV 341
>gi|342180537|emb|CCC90013.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 718
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 110/273 (40%), Gaps = 77/273 (28%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLN-------QKT 470
+FL+HFH DHY G+ + HG I S TA L+ K+G+ R++ + Q
Sbjct: 75 FFLSHFHSDHYNGINPGWSHGIINASRATANLLRWKLGVSSARVRCMDFGMTYIFSIQSG 134
Query: 471 TIAGID---VTCLE---------ANHCPGSIIILFEPQNGKAVLHTGDFRFS-------- 510
+ ++ C+E ANHCPG+++ LF VLHTGDFRFS
Sbjct: 135 MLLSVESGRAACVEDCFAVELIPANHCPGAVMFLFRSAAFGTVLHTGDFRFSPPSPLTTT 194
Query: 511 -------EEMASMSVLQTC-PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNP- 561
++ VL+T + L D TYC P + FP + V+++ I E FN
Sbjct: 195 VRLPSWEPDLREDPVLKTLGTVDVLFFDNTYCFPQFKFPARAEVLKW----INTEVFNTF 250
Query: 562 --------------------------KTLFLIGSYTIGKERLFLEV-----------ARV 584
LIGSY IGKE + L +
Sbjct: 251 LRCKENKRASVALGEGGDPHKRNQRVSVAVLIGSYFIGKELIALSIQENFPPKDVFDGAT 310
Query: 585 LRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEH 617
L YV K+ L+ LD+ + + F++ E
Sbjct: 311 LFAPTYVPPEKYEALQKLDYHPDHFKPFSSLEQ 343
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ +PTGWT K+K R ++ ++VPYSEHCSF+EL +FV FV+P +
Sbjct: 462 QFDCVLCINPTGWTGKPSKQKISDR------VVSFKVPYSEHCSFSELIDFVSFVNPRVV 515
Query: 705 IPSVN 709
IP+V+
Sbjct: 516 IPTVS 520
>gi|311705705|gb|ADQ01118.1| artemis [Macaca fascicularis]
Length = 692
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|311705713|gb|ADQ01122.1| artemis [Lophocebus albigena]
Length = 687
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|124810460|ref|XP_001348885.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
falciparum 3D7]
gi|23497787|gb|AAN37324.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
falciparum 3D7]
Length = 860
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 84/162 (51%), Gaps = 15/162 (9%)
Query: 402 PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL 461
R+ K R C +FLTHFH DHY + + F+ ++CS IT +L+ I + +
Sbjct: 28 ALRISEDKEKRKICRIFFLTHFHADHYTNINKYFNEN-VFCSQITKKLLVNIIEVQDKYV 86
Query: 462 QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
L +N+ + V ++ANHCPGS+II FE +NG ++HTGDFR+S +Q+
Sbjct: 87 HNLKINKIYYLFNFKVAFIDANHCPGSVIIYFEFKNGTKIIHTGDFRYSN-------IQS 139
Query: 522 CPIHTLIL---DTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
I L+ D + C + K E +I+ E I ES N
Sbjct: 140 FLIKKLLSYSGDISICT----YKKNEMIIKGEQEDINRESIN 177
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 95/187 (50%), Gaps = 15/187 (8%)
Query: 530 DTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK 588
DT Y N +++ + ++ +V E + E KTLFL G+Y +GKE+++L ++ K
Sbjct: 596 DTKYSNIHMHEKVNKLDLLTYVNEDKKGEQIKKKTLFLFGTYNLGKEKIYLSLSDACNMK 655
Query: 589 IYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASF------KRLKHMSNQ 641
IY N K ++++ ++K + T N+ E+ IH++ + F K L + +
Sbjct: 656 IYYKNEKKRKIIESFLYNKHILNKITDNKLEAQIHIVDINYSYIFPKIDKRKFLNLIDEE 715
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
F PTGW KK S +++ I + +PYSEH + ELK FVK + P
Sbjct: 716 IEKEFDSFYYIIPTGWV----KKFSF---YERNNISIFLIPYSEHSNLDELKNFVKSIKP 768
Query: 702 EHIIPSV 708
+I+P+V
Sbjct: 769 CNILPTV 775
>gi|311705707|gb|ADQ01119.1| artemis [Miopithecus talapoin]
Length = 692
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHAVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|311705719|gb|ADQ01125.1| artemis [Trachypithecus francoisi]
Length = 681
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRTTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|324072804|ref|NP_001191279.1| protein artemis [Macaca mulatta]
gi|311705693|gb|ADQ01112.1| artemis [Macaca mulatta]
Length = 692
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFEWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|71654845|ref|XP_816034.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881135|gb|EAN94183.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 715
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 97/232 (41%), Gaps = 68/232 (29%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---- 473
+FL+HFH DHY G+T + HG IY S TA ++ ++GIP R++ + T +
Sbjct: 83 FFLSHFHSDHYNGVTEGWSHGTIYASRGTANILCWRLGIPESRVKRMDFCVTYTFSLKNG 142
Query: 474 ------------------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
VT + A HCPGS++ LF VLHTGDFRF+ E +
Sbjct: 143 ALLYETTWDEEEWRCSDEFFSVTLIPAGHCPGSVMFLFRSPVFGTVLHTGDFRFTHEQPN 202
Query: 516 MSVLQTCP-----------------------IHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
+L P + L LD T+C+ ++FP + ++ V +
Sbjct: 203 SFLLPHVPRMPHFQKEIDMMTNPVLKSVAGKVDVLFLDNTFCDERFNFPSRADSLREVNQ 262
Query: 553 AI-----------------------QAESFNPKTLFLIGSYTIGKERLFLEV 581
AI +A+ LIG+Y IGKER+ + +
Sbjct: 263 AILSMFRDHTSSLQGVAKEMNARGHEAKEHAISVAVLIGTYFIGKERIAVSI 314
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ P+GWT K +++ +R + VPYSEH SFTEL +FV F++P I
Sbjct: 475 QFDGVLCVEPSGWT-RKARRQILSKR-----VTLLHVPYSEHSSFTELVDFVGFMNPTRI 528
Query: 705 IPSVN 709
+P+V+
Sbjct: 529 VPTVS 533
>gi|432944132|ref|XP_004083338.1| PREDICTED: protein artemis-like [Oryzias latipes]
Length = 639
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 152/333 (45%), Gaps = 52/333 (15%)
Query: 418 WFLTHFHMDHYQGLT-----RSFHHGK---IYCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL R + +YCS +T L+ N K + + L L
Sbjct: 29 YFLSHCHKDHMKGLKGPLLKRKLQFSRTVRLYCSFVTKELLLNNQKYSFWEEYIVPLELE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS-EEMASM 516
T I+ +D VT L A HCPGS++ LFE G VL+TGDFR + ++A M
Sbjct: 89 SPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFEGCRGN-VLYTGDFRLAVGDVARM 147
Query: 517 SVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIGS 569
+L + I ++ +D+T+ +P Y P +E ++ + E + S +P ++L
Sbjct: 148 ELLHSGSRVKDIQSVYVDSTFYDPRFYQIPSREVCLKGISELVGNWISQSPYHVVWLNCK 207
Query: 570 YTIGKERLFLEVARVLRKKIYVNA-AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
G E LF + +I+VN+ A F+ + +I + T + + IH
Sbjct: 208 AAYGYEYLFTNLGEEFGTQIHVNSLAMFKKMP-------EILSYVTTDRSARIHACRHPK 260
Query: 629 LASF---KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----YE 680
F RL + G I++ P+ F + K++ IIR Y
Sbjct: 261 DEEFFQGNRLPCGCSAADGTPLRIISIKPSTMWFGERTKRT-------NVIIRTGSSSYR 313
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGR 713
+S H S++ELK+F+ ++ P +I P+V GR
Sbjct: 314 ACFSFHSSYSELKDFLAYLKPVNIYPNVVPLGR 346
>gi|328849752|gb|EGF98926.1| hypothetical protein MELLADRAFT_40551 [Melampsora larici-populina
98AG31]
Length = 143
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 5/139 (3%)
Query: 400 GTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
GT VDAFKY + + + +FL+H H DHY L+ ++ HG +YCS TA L+ +G+
Sbjct: 3 GTTIAVDAFKYGKIPNITAYFLSHAHADHYTRLSHTWDHGFVYCSQTTANLICHNLGVKK 62
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA----VLHTGDFRFSEEMA 514
++ L N+ T + G+ VT L+ANHCPGS + LFE + LH GDFR S
Sbjct: 63 QWVKPLKDNEPTMVDGVKVTVLDANHCPGSSLFLFEGVKSQGKPFRYLHCGDFRASPAQL 122
Query: 515 SMSVLQTCPIHTLILDTTY 533
L LDTTY
Sbjct: 123 RHPALNFFFFFFFFLDTTY 141
>gi|311705709|gb|ADQ01120.1| artemis [Colobus guereza]
Length = 689
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIVSIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEVARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +V P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYVCPVNAYPNV 341
>gi|68468735|ref|XP_721426.1| hypothetical protein CaO19.2926 [Candida albicans SC5314]
gi|68469279|ref|XP_721154.1| hypothetical protein CaO19.10443 [Candida albicans SC5314]
gi|46443061|gb|EAL02345.1| hypothetical protein CaO19.10443 [Candida albicans SC5314]
gi|46443344|gb|EAL02626.1| hypothetical protein CaO19.2926 [Candida albicans SC5314]
Length = 830
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 153/389 (39%), Gaps = 132/389 (33%)
Query: 405 VDAFKYLRGD-CSHWFLTHFHMDHYQGLTR-------------------------SFHHG 438
VDAF + D + +FLTHFH DHY G+++ S +
Sbjct: 258 VDAFCFAPHDTINQYFLTHFHADHYGGISKKWAYERVFGNDEDAFNNQTFDFDDDSIYKK 317
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA------------------------- 473
IYC+ IT RL+ ++ I ++ L L+ + I
Sbjct: 318 IIYCTGITGRLLTLRYSIDPRFIKHLELDTRYKIKSYTEKEDDEEEEEEEEEEEMESNDM 377
Query: 474 --GIDVTCLEANHCPGSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVLQTC----- 522
G+ VT + ANHCPG+ I FE +LH GDFR + E+ + +L+
Sbjct: 378 TPGLYVTPITANHCPGAAIFFFESIGIDNKIYRILHCGDFRVNMEILNHPILRPFSLTHS 437
Query: 523 ------PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ---AESFN------------- 560
I + LDTTY +P ++ PKQE V + + Q + N
Sbjct: 438 KNNLLQSIDKVYLDTTYMSPKHNLPKQELVCEIMANLFQDLIQQEINKDEQKKTTSNLFS 497
Query: 561 -------------------------------PKTLFLIGSYTIGKERLFLEVARVLRK-K 588
K L +IG+Y IGKE+L + +++ L
Sbjct: 498 NWFGNFTQSRITDFCTTSSTSKNGLTRPIRKKKFLIVIGTYIIGKEKLAISISKRLNNCL 557
Query: 589 IYVNAA-----KFRVLK---------CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
IY+++ KF + K + KE TN+ + IH++PM +++ +
Sbjct: 558 IYLSSIGSRKDKFEIFKTYKNDYLNSVMTIEKEFGNINDTNDSDCMIHLVPMTLVSNNEE 617
Query: 635 L-KHMS-NQYAGRFSLIVAFSPTGWTFSK 661
L K+ + N+Y F + PTGW++SK
Sbjct: 618 LSKYFNHNKYYQFFERCIGLCPTGWSYSK 646
>gi|311705701|gb|ADQ01116.1| artemis [Symphalangus syndactylus]
Length = 692
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGI 456
+D F +FL+H H DH +GL ++ YCS +T L+
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 457 PWDRLQVLPLN--QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ + +++P+ T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLRIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|311705695|gb|ADQ01113.1| artemis [Nomascus leucogenys]
Length = 692
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGI 456
+D F +FL+H H DH +GL ++ YCS +T L+
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 457 PWDRLQVLPLN--QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+ + +++P+ T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIIPIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|149030436|gb|EDL85473.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Rattus norvegicus]
Length = 221
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 92/168 (54%), Gaps = 13/168 (7%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FL+H H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGTARLFFLSHMHCDHTVGLSSTWAR-PLYCSPITAHLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKQWIRALEIGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
++ M L IHTL LD T CNP P ++ Q +I+ I+
Sbjct: 123 YTPSMLKEPALTLGKQIHTLYLDNTNCNPALVLPSRQEATQQIIQLIR 170
>gi|440302601|gb|ELP94908.1| DNA repair metallo-beta-lactamase, partial [Entamoeba invadens IP1]
Length = 217
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 101/203 (49%), Gaps = 16/203 (7%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT-LFLIGSYTIGKERLFLEVA 582
I TL LDTTYC+P Y FP + +V EA++ + L+++G+Y IGKE E+A
Sbjct: 7 IDTLFLDTTYCDPQYTFPDRVSVSN---EAVKIIKKTKEKTLYVVGTYLIGKEIFVEEIA 63
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQY 642
R KKI VN K + + S+ D+ +T ++ + + S L +Q
Sbjct: 64 RQTGKKICVNEQK---MVTIQLSQRDLSLYTL--EKTDLEMRNSGIEVSLSGLNVELDQI 118
Query: 643 AGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPE 702
+F IV F+PTGW K S + Y++PYSEH +F EL + VK V
Sbjct: 119 KDKFQRIVLFTPTGWAKKLVSKGSFDVK-------EYQLPYSEHSNFNELVDCVKCVKAT 171
Query: 703 HIIPSVNNDGRDSANAMVSLLLN 725
HI+P+V N +D + ++ N
Sbjct: 172 HIVPTVVNPDQDPKQLIDLIITN 194
>gi|405958776|gb|EKC24868.1| Protein artemis [Crassostrea gigas]
Length = 814
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 151/337 (44%), Gaps = 49/337 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGI 456
+D F L + +FL+H H DH +GL + ++ YCS +T L+ K+
Sbjct: 16 LDRFDGLNLKSTVYFLSHCHCDHMEGLASAEFLDRLSSRNDIFLYCSEVTKILLMEKLAK 75
Query: 457 PWDRLQVLPLNQKTTI----------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGD 506
++VL + + + I + VT + A+HCPGS++ LFE +G A L+TGD
Sbjct: 76 LEKFVKVLKVGEPSCIPIPAQNSAKTEKVTVTLIHASHCPGSVMFLFEGYDGTA-LYTGD 134
Query: 507 FRF-SEEMASMSVL----QTCPIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAI------ 554
FR+ S+++ ++ L + P+ +L +DTT+C+P + P + +I+ V + +
Sbjct: 135 FRWESDQIQNVPALHVDQRVKPLASLYVDTTFCHPNSFLIPSRRTIIKVVCDLVTEWTSK 194
Query: 555 ---QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
F P+ + G E L EVA+ L K++V K + + E
Sbjct: 195 GSNHVVHFTPRANY-------GHEPLLKEVAQTLGCKVHVKKDKENIYNQM---SELQGV 244
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW 671
FT++ + +H M RL G ++V P+ F++ S
Sbjct: 245 FTSDSTATPLHACGMKVYGKPPRLP---CNLRGNLKVMVIL-PSTMFFTQSVHVSEREIV 300
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
Q + Y V Y H S E+++ V ++ P + P+V
Sbjct: 301 LQDRGM-YRVCYCFHSSMQEVRDLVTYLQPRQVFPNV 336
>gi|113676970|ref|NP_001038566.1| protein artemis [Danio rerio]
gi|71153323|sp|Q5RGE5.1|DCR1C_DANRE RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein
Length = 639
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 147/327 (44%), Gaps = 50/327 (15%)
Query: 418 WFLTHFHMDHYQGLT-----RSFHHG---KIYCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL R K+YCS +T L+ N + D + L L+
Sbjct: 29 YFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLYCSYVTKELLLSNPRYAFWEDHIVPLELD 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS-EEMASM 516
T+I+ ID VT L A HCPGS++ LFE G VL+TGDFR + + A M
Sbjct: 89 SPTSISLIDESTGETEDVVVTLLSAGHCPGSVMFLFEGAKG-TVLYTGDFRLAVGDAARM 147
Query: 517 SVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVI----QFVIEAIQAESFNPKTLFLI 567
L + I ++ +DTT+ +P Y P +EA + Q V + I ++ L
Sbjct: 148 EYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSREACLAGIQQLVQDWICQSPYHVVWLNCK 207
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTTNEHESHIHVMP 625
+Y G E LF + + +I+VN+ LD K+ +I T + IH
Sbjct: 208 AAY--GYEYLFTNLGQEFNSQIHVNS--------LDMFKKMPEILCHVTTNRATQIHACR 257
Query: 626 MWTLASFKRLKHM---SNQYAGRFSLIVAFSP-TGWTFSKGKKKSPGRRWQQGTIIRYEV 681
F R + S G I++ P T W + +K S + + Y
Sbjct: 258 HPKDEEFFRANRLPCGSTAPDGIPLNIISIKPSTIWFGERTRKTSVVVKMGSSS---YRA 314
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S+ E+K+F+ ++ P +I P+V
Sbjct: 315 CFSFHSSYLEVKDFLSYICPVNIYPNV 341
>gi|348542062|ref|XP_003458505.1| PREDICTED: protein artemis-like [Oreochromis niloticus]
Length = 626
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 145/328 (44%), Gaps = 42/328 (12%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL K+ YCS +T L+ N K + + L L
Sbjct: 29 YFLSHCHKDHMKGLKGPLLKRKLQFSRTVRLYCSFVTKELLLNNPKYAFWEEYIVPLELE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS-EEMASM 516
T I+ +D VT L A HCPGS++ LFE +G VL+TGDFR +++ M
Sbjct: 89 SPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFEGSHGN-VLYTGDFRLPVGDVSRM 147
Query: 517 SVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAESFNP--KTLFLIGS 569
L + I ++ LD+T+ +P Y P +E + + E + ++L
Sbjct: 148 EHLHSGSRVKDIQSIYLDSTFYDPRFYQIPSREVCLSGISELVGKWIIQSPHHVVWLNCK 207
Query: 570 YTIGKERLFLEVARVLRKKIYVNA-AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
G E LF+ + +I+VN A F+ + E + + TTN + IH
Sbjct: 208 AAYGYEYLFINLGEEFNTQIHVNTLAMFKKMP------EILSYVTTNRR-TQIHACRHPK 260
Query: 629 LASF---KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
F RL G I++ P+ F + KK+ G+ Y +S
Sbjct: 261 DEEFFQGNRLPCGCTAADGTPLRIISIKPSTMWFGERTKKTSVIIKTGGS--SYRACFSF 318
Query: 686 HCSFTELKEFVKFVSPEHIIPSVNNDGR 713
H S++E+K+F+ ++ P +I PSV GR
Sbjct: 319 HSSYSEIKDFLSYLQPVNIYPSVIPIGR 346
>gi|221059697|ref|XP_002260494.1| DNA repair metallo-beta-lactamase [Plasmodium knowlesi strain H]
gi|193810567|emb|CAQ41761.1| DNA repair metallo-beta-lactamase, putative [Plasmodium knowlesi
strain H]
Length = 769
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FLTHFH DHY + + FH ++ S IT +L+ IG+ + L +N+ + +V
Sbjct: 44 YFLTHFHADHYTNINKYFHEN-VFSSTITKKLLTNIIGVNEKYIHNLKINKNYHVFNFEV 102
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
++ANHCPGS+II FE NG ++HTGDFR+S
Sbjct: 103 IFIDANHCPGSVIIYFEFANGTKIIHTGDFRYS 135
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 18/156 (11%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
KTLF+ G+Y +GKE+++L V+ KI+ N K +++ +K + T N+ E+
Sbjct: 536 KTLFMFGTYNLGKEKIYLSVSEACNMKIHFRNEKKKTIIQSFLHNKNILNRITDNKLEAQ 595
Query: 621 IHVM--------PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
IH++ P FK L + + F PTGW KK S +Q
Sbjct: 596 IHIVDINYSYIFPKIEKEKFKNL--IDEEIEKEFDSFYYIIPTGWV----KKYSF---YQ 646
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I + +PYSEH + +EL+ FVK + P +IIP+V
Sbjct: 647 NKEISIFLIPYSEHSNLSELENFVKSIKPCNIIPTV 682
>gi|25151114|ref|NP_740895.1| Protein MRT-1 [Caenorhabditis elegans]
gi|20338940|emb|CAD30439.1| Protein MRT-1 [Caenorhabditis elegans]
Length = 608
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 149/327 (45%), Gaps = 51/327 (15%)
Query: 400 GTPFRVDAFKYLRGDCSHW-FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI-- 456
G VD F L+ S + FLTH H DHY+GL + + +YCS TA+L+ +G
Sbjct: 220 GEDISVDYF--LKKSGSRYNFLTHAHSDHYRGLDKKWTRS-VYCSPETAKLLPHIMGYTA 276
Query: 457 ----PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN-----GKAVLHTGDF 507
P + L N VT + ANHCPG+++ +FE G AVL TGDF
Sbjct: 277 DSPPPAGLINPLEENVPHKFDSFQVTLVNANHCPGAVMFVFEGSKIEEIAGGAVLCTGDF 336
Query: 508 RFSEEMASMSVLQTCPIH--------TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESF 559
R +++M S+ +H + LD TY + FP++ + +++AI+A
Sbjct: 337 R-ADKMFLESLKPGNQLHWMTEIKFGIIYLDNTYFSLDMPFPERCEAEKILLKAIEA--- 392
Query: 560 NPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES 619
+P +I + +G+E L ++R+L + I V + + LDFS S
Sbjct: 393 HPHENIVIPLHRLGREELIQAISRILNEPIMVYDERKVISDLLDFS-------------S 439
Query: 620 HIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRY 679
+ V+ + K +K S + S+I+ S +TF G G IIR
Sbjct: 440 NCGVLKQYR--DIKVIKKGSYCEISQNSVIIDISMLYYTFGNGVNDDEG-------IIR- 489
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHIIP 706
+PYS+H S +E+ +F+ + I P
Sbjct: 490 -IPYSDHSSRSEILKFLSHFHFKTITP 515
>gi|321470539|gb|EFX81515.1| hypothetical protein DAPPUDRAFT_317592 [Daphnia pulex]
Length = 473
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 149/308 (48%), Gaps = 25/308 (8%)
Query: 400 GTPFRVDAFKYLRGDCSH-WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G P VD +K + + +FLTH H DH +GLT ++ IY S + L + +
Sbjct: 9 GLPIAVDFWKLPPSNGLYLYFLTHLHTDHTKGLTSTWTE-TIYTSSLNRDLAISMLKVNP 67
Query: 459 DRLQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS 517
+ ++ L + + + VT ++ANH GS++ LFE G+ +L+TGDFR+ E M +
Sbjct: 68 ELIKPLEIGVSYKMNRFVSVTPIDANHIKGSVMYLFEGSFGR-LLYTGDFRWCESMINDP 126
Query: 518 VLQTCP----IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIG 573
VL+ ++ L +D T+ + +FP +E Q ++ ++ +P + G TIG
Sbjct: 127 VLKNLSESKDLNVLYIDNTFEHIGNEFPTRE---QCTLDVLKIMKNHPYHRIIFGCQTIG 183
Query: 574 KERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
KE + L+ + ++K+YV + + L E+I FTT++ +S + + ++ F
Sbjct: 184 KEDVLLQASLERKEKVYVPETILKCYRLLGLPCEEI--FTTDQADSLLWFEKLNQISQFD 241
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELK 693
K S ++ + + +G + K K + + VPYS H S +EL
Sbjct: 242 LKKKNSEMP----TIAIKLTASGLLYKSTKFKDDE--------LIFTVPYSNHSSASELA 289
Query: 694 EFVKFVSP 701
+ + F+ P
Sbjct: 290 KCLDFLQP 297
>gi|83314848|ref|XP_730538.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490291|gb|EAA22103.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 773
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 26/138 (18%)
Query: 405 VDAFKYLR------GDCSH-------WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN 451
+D F Y++ G+C +FLTHFH DHY + ++F+ I+ S IT +L+
Sbjct: 17 IDKFPYIKKKSVTPGECDEKKEITKVYFLTHFHADHYMNINKNFNEN-IFSSTITKKLLI 75
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
IG+ + L +N+ + ++ ++ANHCPGS+II FE NG ++HTGDFR+S
Sbjct: 76 NIIGVDEKYVHNLKVNKNYYLFNFEIILIDANHCPGSVIIYFEFSNGTKIIHTGDFRYSN 135
Query: 512 EMASMSVLQTCPIHTLIL 529
+HTL++
Sbjct: 136 ------------VHTLLI 141
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 22/158 (13%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
KTLF+ G+Y +GKE+++L V+ KIY N K + +K+ + T N+ E+
Sbjct: 536 KTLFMFGTYNLGKEKVYLSVSEACNMKIYFRNPKKKIIFNSYICNKDMLNRITENKLEAE 595
Query: 621 IHVMPMWTLASFKRLK----------HMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR 670
IH++ + F +++ M +++ + +I PTGW
Sbjct: 596 IHIIDINYSYIFPKIEKNKLRSLIDAEMEDEFDSFYYII----PTGWV-------KNYYF 644
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+++ + + +PYSEH + EL+EFVK + P I P+V
Sbjct: 645 YEKNNMSVFLIPYSEHSNLDELREFVKSIKPCSICPTV 682
>gi|156100567|ref|XP_001616011.1| DNA repair metallo-beta-lactamase protein [Plasmodium vivax Sal-1]
gi|148804885|gb|EDL46284.1| DNA repair metallo-beta-lactamase protein, putative [Plasmodium
vivax]
Length = 769
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FLTHFH DHY + + FH ++ S IT +L+ IG+ + L +N+ + ++
Sbjct: 45 YFLTHFHADHYTNINKYFHEN-VFSSTITKKLLTNIIGVNEKYIHNLKINKNYHLFNFEI 103
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
L+ANHCPGS+II FE NG ++HTGDFR+S
Sbjct: 104 IFLDANHCPGSVIIYFEFANGTKIIHTGDFRYS 136
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 16/158 (10%)
Query: 560 NP--KTLFLIGSYTIGKERLFLEVARVLRKKIYV-NAAKFRVLKCLDFSKEDIQWFTTNE 616
NP KTLF+ G+Y +GKE+++L V+ KI+ N K +++ +K + T N+
Sbjct: 532 NPPKKTLFMFGTYNLGKEKIYLSVSEACNMKIHFRNEKKKIIIESFLHNKSMLNRITDNK 591
Query: 617 HESHIHVMPMWTLASFKRLKH------MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR 670
E+ IH++ + F R++ + + F PTGW KK S
Sbjct: 592 LEAQIHIVDINYSYIFPRIEKNKFKNLIDEEIEKEFDSFYYIIPTGWV----KKYSF--- 644
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+Q+ I + +PYSEH + EL+ FVK + P +IIP+V
Sbjct: 645 YQKNEISIFLIPYSEHSNLEELESFVKSIKPCNIIPTV 682
>gi|92096533|gb|AAI15305.1| Dclre1c protein [Danio rerio]
Length = 639
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 146/327 (44%), Gaps = 50/327 (15%)
Query: 418 WFLTHFHMDHYQGLT-----RSFHHG---KIYCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL R K+YCS +T L+ N + D + L L+
Sbjct: 29 YFLSHCHKDHMKGLKGPLLKRKLKFSLTVKLYCSYVTKELLLSNPRYAFWEDHIVPLELD 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS-EEMASM 516
T I+ ID VT L A HCPGS++ LFE G VL+TGDFR + + A M
Sbjct: 89 SPTNISLIDESTGETEDVVVTLLSAGHCPGSVMFLFEGAKG-TVLYTGDFRLAVGDAARM 147
Query: 517 SVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVI----QFVIEAIQAESFNPKTLFLI 567
L + I ++ +DTT+ +P Y P +EA + Q V + I ++ L
Sbjct: 148 EYLHSGDRVKDIQSVYIDTTFFDPKYYQIPSREACLAGIQQLVQDWICQSPYHVVWLNCK 207
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTTNEHESHIHVMP 625
+Y G E LF + + +I+VN+ LD K+ +I T + IH
Sbjct: 208 AAY--GYEYLFTNLGQEFSSQIHVNS--------LDMFKKMPEILCHVTTNRATQIHACR 257
Query: 626 MWTLASFKRLKHM---SNQYAGRFSLIVAFSP-TGWTFSKGKKKSPGRRWQQGTIIRYEV 681
F R + S G I++ P T W + +K S + + Y
Sbjct: 258 HPKDEEFFRANRLPCGSTAPDGIPLNIISIKPSTIWFGERTRKTSVVVKMGSSS---YRA 314
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S+ E+K+F+ ++ P +I P+V
Sbjct: 315 CFSFHSSYLEVKDFLSYICPVNIYPNV 341
>gi|114629490|ref|XP_001147049.1| PREDICTED: protein artemis isoform 8 [Pan troglodytes]
Length = 692
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E ++ V+E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLRGVLELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|398022602|ref|XP_003864463.1| hypothetical protein, conserved [Leishmania donovani]
gi|322502698|emb|CBZ37781.1| hypothetical protein, conserved [Leishmania donovani]
Length = 812
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 102/274 (37%), Gaps = 110/274 (40%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQ--------- 468
+FL+HFH DHY G+T +H G IYCS TA L ++G+P L + L Q
Sbjct: 103 YFLSHFHSDHYAGITNRWHSGTIYCSRPTATLTQSQLGVPASWLFPMDLGQTYIFSLSTG 162
Query: 469 --------------------------------KTTIAGIDVTCLEANHCPGSIIILFEPQ 496
KT V + ANHCPG+++ LF
Sbjct: 163 VCLARVPETPHHPHVQSLLSPPAASSKGQAQEKTVDGMFVVRLIPANHCPGAVMFLFVSP 222
Query: 497 NGKAVLHTGDFRFS-------------------------------EEMASMS-------- 517
VLHTGDFRF+ E+ AS +
Sbjct: 223 VFGTVLHTGDFRFNGSRETWEQFVRSSNGRQTYVPPLPCLIKRGEEQHASTAAPPAPAYE 282
Query: 518 -----------VLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA---------- 556
V Q + L+LD T+C P Y FP Q V Q VIE +++
Sbjct: 283 QFIADDEALRDVAQRQLLDVLLLDNTFCAPAYKFPSQWEVTQRVIEVLRSLFHRAACRAG 342
Query: 557 ----ESFNP-----KTLFLIGSYTIGKERLFLEV 581
+ +P + LIG YTIGKER+ L +
Sbjct: 343 VAVHSAGHPQHRQVRCAVLIGCYTIGKERVALAL 376
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRW-QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
R+ ++ PTGW K+ R ++ T++R VPYSEHC+F EL EFV+FV+P
Sbjct: 578 RYDQVLIVEPTGWC-----KRCVAREVSEKHTLLR--VPYSEHCAFHELLEFVEFVNPAC 630
Query: 704 IIPSVNNDG 712
++P+V+ +G
Sbjct: 631 VVPTVSEEG 639
>gi|158966680|ref|NP_666226.2| protein artemis isoform 1 [Mus musculus]
gi|71153326|sp|Q8K4J0.2|DCR1C_MOUSE RecName: Full=Protein artemis; Short=mArt; AltName: Full=DNA
cross-link repair 1C protein; AltName: Full=SNM1-like
protein
Length = 705
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQA-E 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 195 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM----PDILHHLTTD 248
Query: 617 HESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
+ IH W K +++Q I T W + +K +
Sbjct: 249 RNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI 304
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 305 VRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 341
>gi|410918675|ref|XP_003972810.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis-like [Takifugu
rubripes]
Length = 649
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 146/333 (43%), Gaps = 62/333 (18%)
Query: 418 WFLTHFHMDHYQGLT-----RSFHHGK---IYCSLITARLVNMKIGIP----WDRLQV-L 464
+FL+H H DH +GL R + +YCS +T L+ + P W+ V L
Sbjct: 29 YFLSHCHKDHMKGLKGPALKRKLQFSRTVRLYCSFVTKELL---LSSPRYAFWEEYTVPL 85
Query: 465 PLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EM 513
L T I+ ++ VT L A HCPGS++ LFE G VL+TGDFR S ++
Sbjct: 86 ELESPTQISLVEETTGEKEDLVVTLLSAGHCPGSVMFLFEGSQG-TVLYTGDFRISAGDI 144
Query: 514 ASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEA----IQAESFNPKTL 564
+ M L + I ++ LD+T+ +P Y P +E + ++E I S++ L
Sbjct: 145 SRMEHLHSGSRVKDIQSIYLDSTFYDPRFYRIPTRETCLNGIMELVGNWISQSSYHVVWL 204
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK-EDIQWFTTNEHESHIHV 623
+Y G E LF + + +I+VN F K DI + T + IH
Sbjct: 205 NCKAAY--GYEYLFTHLGKRFNTEIHVNXLTM-------FKKMPDILSYLTTNRRTQIHA 255
Query: 624 MPMWTLASF---KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-- 678
F RL G I++ P+ F + KK+ II+
Sbjct: 256 CRHPRSEDFFPSSRLPCGCTAADGTPLRIISIKPSTIWFGERTKKT-------NVIIKTG 308
Query: 679 ---YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ +S H SF+ELK+F+ ++ P +I PSV
Sbjct: 309 ASSFRACFSFHSSFSELKDFLSYLQPVNIHPSV 341
>gi|332216914|ref|XP_003257596.1| PREDICTED: protein artemis [Nomascus leucogenys]
Length = 672
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 149/329 (45%), Gaps = 48/329 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGI 456
+D F +FL+H H DH +GL ++ YCS +T L+ +
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELL---LTS 72
Query: 457 PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMAS 515
P R +K I VT L A HCPGS++ LF+ NG VL+TGDFR ++ E A
Sbjct: 73 PKYRFW-----KKRIKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAQGEAAR 126
Query: 516 MSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIG 568
M +L + I ++ LDTT+C+P Y P +E + ++E +++ + +P ++L
Sbjct: 127 MELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWITRSPYHVVWLNC 186
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G E LF ++ L +++VN FR + DI T + + IH
Sbjct: 187 KAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------DILHHLTTDRNTQIHACRHP 239
Query: 628 TLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----Y 679
+ + + R + I++ P+ F + +K+ I+R Y
Sbjct: 240 KAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESSY 292
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+K+F+ ++ P + P+V
Sbjct: 293 RACFSFHSSYSEIKDFLSYLCPVNAYPNV 321
>gi|26338211|dbj|BAC32791.1| unnamed protein product [Mus musculus]
Length = 213
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 13/168 (7%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASM-SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
++ M +++ IHTL LD T CNP P ++ Q +++ I+
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIR 170
>gi|339899168|ref|XP_001468662.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398698|emb|CAM71749.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 812
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 102/274 (37%), Gaps = 110/274 (40%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQ--------- 468
+FL+HFH DHY G+T +H G IYCS TA L ++G+P L + L Q
Sbjct: 103 YFLSHFHSDHYAGITNRWHSGTIYCSRPTATLTQSQLGVPASWLFPMDLGQTYIFSLSTG 162
Query: 469 --------------------------------KTTIAGIDVTCLEANHCPGSIIILFEPQ 496
KT V + ANHCPG+++ LF
Sbjct: 163 VCLARVPETPHHPHVQALLSPPAASSKGQAQEKTVDGMFVVRLIPANHCPGAVMFLFVSP 222
Query: 497 NGKAVLHTGDFRFS-------------------------------EEMASMS-------- 517
VLHTGDFRF+ E+ AS +
Sbjct: 223 VFGTVLHTGDFRFNGSRETWEQFVRSSNGRQTYVPPLSCLIKRGEEQHASTAAPPAPAYE 282
Query: 518 -----------VLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA---------- 556
V Q + L+LD T+C P Y FP Q V Q VIE +++
Sbjct: 283 QFIADDEALRDVAQRQLLDVLLLDNTFCAPAYKFPSQWEVTQRVIEVLRSLFHRAACRAG 342
Query: 557 ----ESFNP-----KTLFLIGSYTIGKERLFLEV 581
+ +P + LIG YTIGKER+ L +
Sbjct: 343 VAVHSAGHPQHRQVRCAVLIGCYTIGKERVALAL 376
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRW-QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
R+ ++ PTGW K+ R ++ T++R VPYSEHC+F EL EFV+FV+P
Sbjct: 578 RYDQVLIVEPTGWC-----KRCVAREVSEKHTLLR--VPYSEHCAFHELLEFVEFVNPAR 630
Query: 704 IIPSVNNDG 712
++P+V+ +G
Sbjct: 631 VVPTVSEEG 639
>gi|13872809|emb|CAC37570.1| artemis protein [Homo sapiens]
Length = 692
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + V+E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|345310055|ref|XP_001515535.2| PREDICTED: protein artemis [Ornithorhynchus anatinus]
Length = 700
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLAARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIA----------GIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ L + T I+ I+VT L A HCPGS++ LF+ G VL+T
Sbjct: 76 RFWENRIISLEVETPTQISLTDEATGEKEEIEVTLLPAGHCPGSVMFLFQGNRG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E+A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAKGEVARMELLHSGSRVKDIQSVYLDTTFCDPKFYQIPSREECLHGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +++VN K + + + DI T +
Sbjct: 195 TLSPYHVVWLNCKAAFGYEYLFTNLSEEFGAQVHVN--KLDMFRNM----PDILHHITTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMS---NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ 673
S IH F R + G +++ P+ F + +++
Sbjct: 249 RGSQIHACRHPRAEEFLRWNRLPCGMTSKDGTPLQVISIKPSTMWFGERTRRT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+ +F+ ++ P + P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEILDFLSYIRPVNAHPNV 341
>gi|76496497|ref|NP_001029027.1| protein artemis isoform a [Homo sapiens]
gi|71153325|sp|Q96SD1.2|DCR1C_HUMAN RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein; AltName: Full=Protein A-SCID; AltName:
Full=SNM1 homolog C; Short=hSNM1C; AltName:
Full=SNM1-like protein
Length = 692
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + V+E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|119606658|gb|EAW86252.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_c [Homo sapiens]
Length = 692
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIEAPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + V+E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|148675639|gb|EDL07586.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 213
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 94/168 (55%), Gaps = 13/168 (7%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS ITA L++ ++ +
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITACLLHRRLQV 64
Query: 457 P--WDRL------QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
W R VLPL++ + VT ++ANHCPGS++ LFE G +L+TGDFR
Sbjct: 65 SKHWIRALEVGESHVLPLDEIGQ-ETMTVTLIDANHCPGSVMFLFEGYFG-TILYTGDFR 122
Query: 509 FSEEMASM-SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
++ M +++ IHTL LD T CNP P ++ Q +++ I+
Sbjct: 123 YTPSMLKEPALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIR 170
>gi|389585475|dbj|GAB68206.1| DNA repair metallo-beta-lactamase protein [Plasmodium cynomolgi
strain B]
Length = 572
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FLTHFH DHY + + FH ++ S IT +L+ IG+ + L +N+ + ++
Sbjct: 45 YFLTHFHADHYSNINKYFHEN-VFSSTITKKLLTNIIGVNEKYIHNLKINKNYHLFNFEI 103
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
++ANHCPGS+II FE NG ++HTGDFR+S
Sbjct: 104 IFIDANHCPGSVIIYFEFANGTKIIHTGDFRYS 136
>gi|311705703|gb|ADQ01117.1| artemis [Gorilla gorilla]
Length = 692
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + V+E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|115474405|ref|NP_001060799.1| Os08g0107600 [Oryza sativa Japonica Group]
gi|42408235|dbj|BAD09392.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|113622768|dbj|BAF22713.1| Os08g0107600 [Oryza sativa Japonica Group]
gi|215767381|dbj|BAG99609.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 663
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 141/326 (43%), Gaps = 39/326 (11%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH G+T + + +Y S +T L+ I D
Sbjct: 8 GLPFAVDTWTAASAVKRHRFLTHAHRDHIAGITAT-NVAAVYASRLTI-LIACHIFPQLD 65
Query: 460 RLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
R P+ VT +ANHCPG+++ LFE + VLHTGD R + +
Sbjct: 66 RADAFVEVELGAPVLVPDPDGDFTVTAFDANHCPGAVMFLFEGASFGRVLHTGDCRLTPD 125
Query: 513 MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTI 572
++ + LD T+ FP ++ I+ VI I N ++L+ S +
Sbjct: 126 FRFLAA------DYVFLDCTFAACSLHFPSKDDSIRQVINCIWKHP-NAPVVYLV-SDML 177
Query: 573 GKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA- 630
G+E + +EV++V KIYV+ K L +I T++ S V+ L+
Sbjct: 178 GQEEILMEVSKVFGSKIYVDRDKNSECYHTLSLVAPEI---LTDDSSSRFQVIGFPRLSE 234
Query: 631 ------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----Y 679
+ R KH LI+ S + + + + S R+ +R +
Sbjct: 235 RATEMLALARAKHQPE------PLIIRASSQWYAYYEPPEGSTKRKPALTEPMRDEFGVW 288
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHII 705
V +S H S EL++ ++F+ P+ +I
Sbjct: 289 HVCFSMHSSREELEQALRFIQPKWVI 314
>gi|148675984|gb|EDL07931.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_d [Mus musculus]
Length = 704
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 25 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 84
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 85 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 143
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQA-E 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 144 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 203
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 204 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM----PDILHHLTTD 257
Query: 617 HESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
+ IH W K +++Q I T W + +K +
Sbjct: 258 RNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI 313
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 314 VRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 350
>gi|242211498|ref|XP_002471587.1| predicted protein [Postia placenta Mad-698-R]
gi|220729359|gb|EED83235.1| predicted protein [Postia placenta Mad-698-R]
Length = 959
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 152/405 (37%), Gaps = 111/405 (27%)
Query: 398 VPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV---- 450
+P P +VD F G + LTH H DH GL+ G++ CS ++
Sbjct: 11 IPPYPIKVDNFCASYGSKPPSALHLLTHTHTDHLYGLSARSFSGQVICSRDAKEMLLRHE 70
Query: 451 ----------------------------NMKIGI-----PWDRLQVLPLNQKTTI----- 472
M+ G D ++ LPL TTI
Sbjct: 71 VYGERALKDQDIRAEKTRTFAHLKVEPRVMQDGTLLFEGARDLIRTLPLYTPTTIELDDK 130
Query: 473 AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ-------T 521
+ +T +ANHCPG+++ L E +G AVLHTGDFR F + + LQ +
Sbjct: 131 KRVKLTLFDANHCPGAVMFLIEGDDG-AVLHTGDFRAEPWFLQSLMKNPFLQKYLAPPPS 189
Query: 522 CP---------IHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
C +HTL LDT P ++A ++E + P TLF I +
Sbjct: 190 CSGARRTHEDVLHTLEAIHLDTACLFSTLHVPTKDAATSGLMELMCL--LPPTTLFFINA 247
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
+T G E + ++R R +I+V+ KF V K L+ T + + H
Sbjct: 248 WTWGYEDVLKAISRTFRTRIHVDRYKFGVYKHLEGEPFLQNIITQDAASTRFHA-----C 302
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKK------------------------- 664
F R H+S +VA SP T + G+
Sbjct: 303 ERFDRCNHVS---------VVAESPRNQTVAAGRSVNANGEHVVYVNPVTMGVAGWDLYL 353
Query: 665 KSPGRRWQQGTIIRY-EVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
K R +G I+ + VP S H EL++FV P+ ++P+
Sbjct: 354 KETRERLARGEIVNHLLVPLSRHSPLPELRDFVSLFRPKQVVPNT 398
>gi|307193937|gb|EFN76517.1| Artemis protein [Harpegnathos saltator]
Length = 387
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 148/336 (44%), Gaps = 35/336 (10%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFH------HGKIYCSLITARLVN 451
+PG VD F S +FL+H H DH GL F +YCS I+ +++N
Sbjct: 11 IPGI--SVDRFDGENLSSSAYFLSHCHTDHMIGLNHEFFAHLQQFDKYLYCSSISKQILN 68
Query: 452 MKI------GIPWD-RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHT 504
I D R+ V N + VTC+ A HCPGS++ LFE ++ K +L+T
Sbjct: 69 ANCPNMYVKDIEVDKRVAVEYKNGSGETDILFVTCISAGHCPGSVMFLFE-RDDKLILYT 127
Query: 505 GDFRF---------SEEMASMSVLQTCPIHTLILDTTYCNPLY-DFPKQEAVIQFVIEAI 554
GDFR S S S + + + LDTT+ NP + FP ++ + + I
Sbjct: 128 GDFRINSLDLPKLRSLHFRSGSKVLPKKLTKVYLDTTFFNPNFATFPTRKESVSMICNII 187
Query: 555 QA-ESFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
+ + +P+ + L S G E LF+E+++ L ++V F L + + +
Sbjct: 188 KNWLTKSPRHAVILECSALYGSEFLFMELSKFLNIPVHVRNIVFPNLCRISDLRPHV--- 244
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
TT+ + + IH +K S+ IVA S W +GK S W
Sbjct: 245 TTDPYATPIHACMGKMECGLGLMKCRSDIPQENVLTIVA-SAYKW---EGKDTSVIGAWD 300
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + YS H SF EL+ F+++ PE I P V
Sbjct: 301 SAKERTFNICYSTHSSFEELQAFIQYFKPEDIFPCV 336
>gi|308498135|ref|XP_003111254.1| hypothetical protein CRE_03853 [Caenorhabditis remanei]
gi|308240802|gb|EFO84754.1| hypothetical protein CRE_03853 [Caenorhabditis remanei]
Length = 616
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 167/364 (45%), Gaps = 61/364 (16%)
Query: 394 TWCCVP------GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK-IYCSLIT 446
T C P G+ VD F R + FLTH H DH +GL + G+ +YCS T
Sbjct: 238 TMCAKPYSKIEIGSSIAVDYF-IKRSKRPYHFLTHAHTDHTRGLDLT--AGRPVYCSPQT 294
Query: 447 ARLVNMKIGI-PWDRLQ----VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQ----- 496
A ++ +G+ P L L L + G VT L+ANHCPGS++ LFE
Sbjct: 295 ALILPKIMGVDPKHILDGTICPLELMRPHRFEGFQVTLLDANHCPGSVMFLFEGYLIEEF 354
Query: 497 NGKAVLHTGDFRFSEEMAS-----MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVI 551
G VL TGDFR + + ++ L + + LD TY +FP +++ + +I
Sbjct: 355 AGGPVLCTGDFRADKTFMNRLDGPLNFLSEFRLARIYLDNTYFKLDLEFPTRKSAQKKLI 414
Query: 552 EAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
+ I+A+ K +F I + +G+E L E +R+L++ I + K + + L+ K+ I+
Sbjct: 415 KEIKAK--RDKNIF-IPLHRLGRESLLEETSRILKEPIIIYKEKLEIAELLNHFKKKIET 471
Query: 612 FTTN--------EH---ESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSP----TG 656
+N EH + +H T+ SF R+ N S+I+ S G
Sbjct: 472 RKSNRKIEVVKKEHNILKLVLHSGEGVTIFSF-RIPVSEN------SVIIDLSALHHLVG 524
Query: 657 WTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSA 716
+ +K+ IIR + YS+H S TE+ EF+K +S E I P+ ++
Sbjct: 525 TRVATDEKRE---------IIR--ISYSDHSSRTEILEFLKELSFESIYPASKEFTKNEM 573
Query: 717 NAMV 720
M+
Sbjct: 574 KTML 577
>gi|311705717|gb|ADQ01124.1| artemis [Pongo pygmaeus]
Length = 692
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRIKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|197102870|ref|NP_001126451.1| protein artemis [Pongo abelii]
gi|71153327|sp|Q5R6Z9.1|DCR1C_PONAB RecName: Full=Protein artemis; AltName: Full=DNA cross-link repair
1C protein
gi|55731499|emb|CAH92461.1| hypothetical protein [Pongo abelii]
Length = 692
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRIKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++VN FR + +I T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + R + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|195999584|ref|XP_002109660.1| hypothetical protein TRIADDRAFT_53902 [Trichoplax adhaerens]
gi|190587784|gb|EDV27826.1| hypothetical protein TRIADDRAFT_53902 [Trichoplax adhaerens]
Length = 440
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 154/347 (44%), Gaps = 56/347 (16%)
Query: 404 RVDAFKYLRGDC-------SH-WFLTHFHMDHYQGLT----RSFHHGK----IYCSLITA 447
RV + ++ DC +H +FL+H H DH +GL R+ +G+ IYCS IT
Sbjct: 7 RVSEYPWIAIDCFLKQNFTAHFYFLSHLHQDHMKGLDSPAFRTHLNGRPKSRIYCSEITK 66
Query: 448 RLVNMKIGIPWDRL--QVLPLNQK-------------TTIAGIDVTCLEANHCPGSIIIL 492
++ +L Q +P N K T I + VT L + HCPGS++ L
Sbjct: 67 SILIKDANYSHLKLFLQSVPTNDKIFIELQQTFDTSYTEIETVAVTFLPSGHCPGSMMFL 126
Query: 493 FEPQNGKAVLHTGDFRFSEEMASMSV---LQTCPIHTLILDTTYCNP-LYDFPKQEAVIQ 548
E ++G +L+TGDFR + V L I ++ LDTT+C P + PK++ + +
Sbjct: 127 LEGKHGN-ILYTGDFRMEGDEHKFMVYNYLSAITIDSVYLDTTFCLPEMMTIPKRKTITK 185
Query: 549 FVIEAIQ---AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
+I IQ + N + L +G E L E+A+ L+ KI V++ + +K D
Sbjct: 186 QIINKIQQWLCQGTN-HVVCLRCRARLGYEYLLSEIAKKLKTKILVHSDQ---IKLYDNI 241
Query: 606 KEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKK 665
E T + E+ IH M + L + + I+ P +F+ +
Sbjct: 242 PEVRSNLTLVDKETKIH---MCIRGRCRLLSGPPTPDSKKLK-ILRIKPCALSFAYNMEA 297
Query: 666 SPGRRWQQGTIIR----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+QG R Y YS H S E+ EF+K + P + P+V
Sbjct: 298 -----LKQGCFTRGANFYSFLYSAHSSMAEIIEFLKCLRPLKVYPNV 339
>gi|125559879|gb|EAZ05327.1| hypothetical protein OsI_27531 [Oryza sativa Indica Group]
Length = 663
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 140/326 (42%), Gaps = 39/326 (11%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH G+T + + +Y S +T L+ I D
Sbjct: 8 GLPFAVDTWTAASAVKRHRFLTHAHRDHIAGITAT-NVAAVYASRLTI-LIARHIFPQLD 65
Query: 460 RLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
R P+ VT +ANHCPG+++ LFE + VLHTGD R + +
Sbjct: 66 RADAFVEVELGAPVLVPDPDGDFTVTAFDANHCPGAVMFLFEGASFGRVLHTGDCRLTPD 125
Query: 513 MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTI 572
++ + LD T+ FP ++ I+ VI I N ++L+ S +
Sbjct: 126 FRFLAA------DYVFLDCTFAACSLHFPSKDDSIRQVINCIWKHP-NAPVVYLV-SDML 177
Query: 573 GKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA- 630
G+E + +EV++V KIYV+ K L +I T+ S V+ L+
Sbjct: 178 GQEEILMEVSKVFGSKIYVDRDKNSECYHTLSLVAPEI---LTDNSSSRFQVIGFPRLSE 234
Query: 631 ------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----Y 679
+ R KH LI+ S + + + + S R+ +R +
Sbjct: 235 RATEMLALARAKHQPE------PLIIRASSQWYAYYEPPEGSTKRKPALTEPMRDEFGVW 288
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHII 705
V +S H S EL++ ++F+ P+ +I
Sbjct: 289 HVCFSMHSSREELEQALRFIQPKWVI 314
>gi|154152069|ref|NP_001093847.1| protein artemis [Bos taurus]
gi|151554853|gb|AAI48007.1| DCLRE1C protein [Bos taurus]
gi|296481454|tpg|DAA23569.1| TPA: DNA cross-link repair 1C [Bos taurus]
Length = 710
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+CNP Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCNPKYYQIPSREECLRGIMELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
S +P ++L G E LF ++ +++V+ FR + DI T
Sbjct: 195 SRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ ++ IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRDTQIHACRHPKAEEYFQWSKLPCGITSKNRIPLHTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 302 -NIIMRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNV 341
>gi|440906804|gb|ELR57026.1| Protein artemis [Bos grunniens mutus]
Length = 710
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRILSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+CNP Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCNPKYYQIPSREECLRGIMELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
S +P ++L G E LF ++ +++V+ FR + DI T
Sbjct: 195 SRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ ++ IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRDTQIHACRHPKAEEYFQWSKLPCGITSKNRIPLHTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 302 -NIIMRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNV 341
>gi|378732158|gb|EHY58617.1| DNA cross-link repair 1C protein [Exophiala dermatitidis
NIH/UT8656]
Length = 683
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 123/246 (50%), Gaps = 45/246 (18%)
Query: 403 FRVDAFKYLRGDC--SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------V 450
RVD F+ G + +FL+H H DH GL S +YCS T R+ +
Sbjct: 14 IRVDYFRTHPGKPPPAAYFLSHVHSDHLLGL-ESVKMPFVYCSATTRRILLKLEKYPHRI 72
Query: 451 NMKIGIPWDR----------LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEP 495
N GI R L+ LPL+ T + + I VT L+ANHCPG+++ L E
Sbjct: 73 NFAKGILESRKQHYRHLKTILRPLPLHVSTELELGPKSTIKVTLLDANHCPGAVMFLIE- 131
Query: 496 QNGKAVLHTGDFRFSEEMASMSVLQ-------TCPIHTL---ILDTTYCN---PLYDFPK 542
+GKA+L+TGD R +E S++Q TC + TL LDTT+ + P +FP
Sbjct: 132 GDGKAILYTGDIR-AEPWWVNSIVQNPVILPYTCRLKTLDCIYLDTTFASHDEPYREFPT 190
Query: 543 QEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ ++ ++E + S P T+F ++T+G E +++ ++ L +++V+ + R+ +
Sbjct: 191 KAEGLKELLEKVGQCS--PDTIFYFRAWTLGYEDVWVALSNYLDSRVHVDDYQLRIFRPS 248
Query: 603 DFSKED 608
S ED
Sbjct: 249 KDSGED 254
>gi|110759553|ref|XP_001122361.1| PREDICTED: protein artemis-like isoform 1 [Apis mellifera]
gi|328781177|ref|XP_003249933.1| PREDICTED: protein artemis-like isoform 2 [Apis mellifera]
Length = 392
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/348 (27%), Positives = 153/348 (43%), Gaps = 59/348 (16%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF------HHGKIYCSLITARLVN 451
+PG VD F S +FL+H H DH GL+ F ++ +YCS IT L+
Sbjct: 11 IPGIS--VDRFDGANLTSSIFFLSHCHSDHMHGLSDMFFEHIDEYNKYLYCSPITKALLE 68
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG---------IDVTCLEANHCPGSIIILFEPQNGKAVL 502
+ ++ + +N T I I VTC+ A HCPGS++ LFE +N ++L
Sbjct: 69 NRFKFKTSCVKEIDINSPTVIEYSIKNEDKILICVTCIPAGHCPGSVMFLFE-KNNISIL 127
Query: 503 HTGDFRFS-EEMASMSVLQTCPIHTLI--------LDTTYCNPLY-DFP-KQEAVIQFVI 551
+TGDFR + ++ + L LI LDTT+ + + FP +QE+V +
Sbjct: 128 YTGDFRINPKDFPKLKSLHYYNDSKLIPKSFTKIYLDTTFLSTDFSSFPTRQESVFKMYE 187
Query: 552 EAIQAESFNPKTLFLI-GSYTIGKERLFLEVARVLRKKIYVNAAKFRV------LKCLDF 604
S +P+ + ++ S G E LF+E++++L KI+V + F L C
Sbjct: 188 VIKNWISKDPRNVVILECSAMYGSEFLFVELSKMLNMKIHVRSDVFETYCRIAQLSC--- 244
Query: 605 SKEDIQWFTTNEHESHIHVMPMWTLASFKRLK----HMSNQYAGRFSLIVAFSPTGWTFS 660
+ T + + + IH A K++ H + + + V S W
Sbjct: 245 ------YVTNDPYSTSIH-------ACKKKISVSGLHCRSDVSNMNIMTVIPSVMKW--- 288
Query: 661 KGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ K + W + + V YS H SF ELK F+++ I P V
Sbjct: 289 RKKDTTIIGEWDKVKERTFNVCYSTHSSFNELKAFIQYFEALEIYPCV 336
>gi|355682952|gb|AER97013.1| DNA cross-link repair 1C [Mustela putorius furo]
Length = 691
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 151/340 (44%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ N K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELLLTNPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIVSIEIETPTQIPLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E ++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIVELVRGWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +I+VN K + + + DI T +
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVN--KLDMFRNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + + ++ P+ F + +++
Sbjct: 249 RSTQIHACRHPKAEEYFHWNKLPCGIISKNKIPLHTISIKPSTMWFGERTRRT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P +I P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNIYPNV 341
>gi|426240813|ref|XP_004014288.1| PREDICTED: protein artemis [Ovis aries]
Length = 710
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVCLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIVSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E ++ ++E ++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKYYQIPSREECLRGIMELVRNWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
S +P ++L G E LF ++ +++VN FR + DI T
Sbjct: 195 SRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVNKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ ++ IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRDTQIHACRHPKAEEYFQWNKLPCGITSKNKIPLHTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 302 -NIIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNV 341
>gi|449480732|ref|XP_004176570.1| PREDICTED: LOW QUALITY PROTEIN: protein artemis [Taeniopygia
guttata]
Length = 654
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 439 KIYCSLITARLV--NMKIGIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCP 486
K+YCS +T L+ N K + + L + T I+ D VT L A HCP
Sbjct: 27 KLYCSPVTKELLLTNWKYKFWENHIVALEVETPTQISLEDETSGEKEDVVVTLLPAGHCP 86
Query: 487 GSIIILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDF 540
GS++ LFE +NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y
Sbjct: 87 GSVMFLFEGENG-TVLYTGDFRLAKGEAARMELLHSGTRVKDIQSVYLDTTFCDPKFYHI 145
Query: 541 PKQEAVIQFVIEAIQAESFNPK--TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +E + ++E ++ + + ++L G E LF+ ++ L K+++N
Sbjct: 146 PSREECLNGILELVRNWTSLSRNHVVWLNCKAAYGYEYLFINLSEELGIKVHMNK----- 200
Query: 599 LKCLDFSKE--DIQWFTTNEHESHIHVMPMW---TLASFKRLKHMSNQYAGRFSLIVAFS 653
LD + +I T + + IH RL G I++
Sbjct: 201 ---LDMXRNMPEILCHVTTDQRTQIHACRHPRDDDCFRGNRLPCGMTCLNGTPLHIISIK 257
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
P+ F + KKK+ I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 258 PSTMWFGERKKKT-------SIIVRTGERTYRACFSFHSSYSEIKDFLSYICPVNVYPNV 310
>gi|395827301|ref|XP_003786843.1| PREDICTED: protein artemis [Otolemur garnettii]
Length = 692
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 154/341 (45%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGKKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P + + ++E +++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRGECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ +++V+ FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVDKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + + + I++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPKAEEYFQWNRLPCGIISKNRVPLHIISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ PE++ P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPENVYPNV 341
>gi|268569792|ref|XP_002640615.1| Hypothetical protein CBG08727 [Caenorhabditis briggsae]
Length = 533
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 44/324 (13%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG-- 455
V G VD F+ C++ FLTH H +H +G+ F H K+YCS TA+++N+ +G
Sbjct: 219 VIGDHISVDYFQQ-SSKCNYHFLTHAHSEHCRGINAKFPH-KVYCSKETAKILNLIVGEP 276
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQ-----NGKAVLHTGDFRFS 510
+P D +Q L LN VT ++ANHCPG+++ +F+ G +L TGDFR
Sbjct: 277 LPEDTIQPLDLNIPYKFENFQVTAIDANHCPGAVMFVFQGPLIDEIAGGPILCTGDFRAE 336
Query: 511 E------EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN-PKT 563
E + ++ + LD TY + F +E Q +Q E N P
Sbjct: 337 ASYMRQFENEKLGWVKDISFARIYLDNTYFSVDVAFTSREISEQL----LQKEIMNHPDA 392
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
++ + +G+ER+ ++ + + I+V K + K L F E + + I V
Sbjct: 393 DIVLPLHQLGQERIIENLSYRIYEPIFVYPEKLAIGKVLGFFYE----YGIANQKRQIQV 448
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY 683
+ K G+ +++ + + + P R VPY
Sbjct: 449 VE----------KREMPDALGKPIIVIEVTQVDHLYGGVSESDPNIR----------VPY 488
Query: 684 SEHCSFTELKEFVKFVSPEHIIPS 707
S+H S E+ +F++ I P+
Sbjct: 489 SDHSSREEILKFLECFQFNEIYPT 512
>gi|74147659|dbj|BAE38706.1| unnamed protein product [Mus musculus]
Length = 573
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 156/340 (45%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQA-E 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 195 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNMP----DILHHLTTD 248
Query: 617 HESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
+ IH W K +++Q I T W + +K +
Sbjct: 249 RNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI 304
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 305 VRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 341
>gi|302829404|ref|XP_002946269.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f.
nagariensis]
gi|300269084|gb|EFJ53264.1| hypothetical protein VOLCADRAFT_86370 [Volvox carteri f.
nagariensis]
Length = 2638
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 92/171 (53%), Gaps = 13/171 (7%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI-QWFTTNEHESH 620
+ L+L+ +Y I KER+ L + + ++YV+ K VL L ++ + FTT+ +
Sbjct: 408 RRLYLVSTYVIRKERILLAIRQRCGVRVYVSETKLAVLSLLGLPEQQLADTFTTDPRVTP 467
Query: 621 IHVMPMWTLA--------SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQ 672
+HV+P TL +F ++ ++ + +V F PTGW + + P R
Sbjct: 468 VHVVPWGTLGETWPFFRPNFVNMQRIAEEMGA--PAVVGFCPTGWLYEMKRTAFPVR--T 523
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+G++ + VPYSEH S++EL+E+V+++ P+ +IP+V G D ++L
Sbjct: 524 RGSLSVHLVPYSEHSSYSELREYVRWLRPQRVIPTVGVGGDDGERNRAAML 574
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 14/78 (17%)
Query: 474 GIDVTCLEANHCPGSIIILFE-PQNGKAVLHTGDFRFSEEMASMSVLQTCPI-------H 525
G++VT ++ANHCPG++ +LF P +G LHTGD RF MA TCP+
Sbjct: 145 GVEVTLVDANHCPGAVQLLFRLPASGARYLHTGDMRFCAAMA------TCPLLAAWRGCE 198
Query: 526 TLILDTTYCNPLYDFPKQ 543
++LDTTYC+P + FP Q
Sbjct: 199 AVLLDTTYCSPKHTFPLQ 216
Score = 65.1 bits (157), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 392 IPTWCCVPGT--PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+P +PGT VDAF+Y +FLTH H DHY GL+ S+ G IYCS TARL
Sbjct: 6 LPPHKVIPGTGGTIVVDAFRYAHPGIKAYFLTHAHSDHYTGLSDSWCCGPIYCSETTARL 65
Query: 450 VNMKIGIPWDRLQVLPLNQKTTIA 473
V G+ L+ LP+ Q +A
Sbjct: 66 VAHLCGVDPAYLKPLPMRQPVMVA 89
>gi|354468024|ref|XP_003496467.1| PREDICTED: protein artemis-like [Cricetulus griseus]
Length = 688
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 44/337 (13%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T IA +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRVVTIEIETPTQIALVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLKGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ L +++V+ FR + DI T
Sbjct: 195 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDKMDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHM----SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW 671
+ + +H + + + +++ I T W + +K + R
Sbjct: 248 DRNTQVHACRHPKAEEYFQWNKLPCGITSKNKAMLHTISIKPSTMWFGERTRKTNVIART 307
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 308 GESS---YRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|340053163|emb|CCC47450.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 698
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 97/230 (42%), Gaps = 66/230 (28%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG------IPWDR-------LQVL 464
+FL+HFH DHY G+T + HG IY S TA ++ K+ +P D L+
Sbjct: 72 FFLSHFHSDHYAGITSRWSHGTIYASRATANMLCWKLEVEKQCVVPLDYSVPYQFCLETG 131
Query: 465 PLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA 514
L Q AG++ VT L A+HCPGS + LF VLHTGDFRFS
Sbjct: 132 KLVQGEEAAGLEAKHCDTNCFSVTLLPADHCPGSAMFLFRSPVFGTVLHTGDFRFSRNPP 191
Query: 515 SM-------------SVLQTCP-----IHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-- 554
++ ++L+ + L LD T+C+P +DFP + + AI
Sbjct: 192 TVPRALCSRSGSSTPTLLEAATPLAGKVDRLFLDNTFCSPEFDFPSCVDTLNEINTAILD 251
Query: 555 -----------------------QAESFNPKTLFLIGSYTIGKERLFLEV 581
+ E+ L+GSY IGKE + L +
Sbjct: 252 VFREYERDHRYRTRCDLTQTRLLEEETSEVSIAVLVGSYVIGKELVALSI 301
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 6/65 (9%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ TGW KK R ++ +PYSEHCSFTEL +FV ++P +
Sbjct: 478 QFDRVICVQATGWAKFTTMKKLSDR------MLLLRIPYSEHCSFTELVDFVGLINPLQV 531
Query: 705 IPSVN 709
+P+V+
Sbjct: 532 VPTVS 536
>gi|410963228|ref|XP_003988167.1| PREDICTED: protein artemis isoform 1 [Felis catus]
Length = 690
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 154/340 (45%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ N +
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELLLTNPRY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +++V+ K + + + DI T +
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTHLSEEFGIQVHVD--KLDMFRNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + ++ ++ P+ F + +K+
Sbjct: 249 RNTQIHACRHPKAEEYFHWNKLPCGNISKNTIPLHTISIKPSTMWFGERTRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEVKDFLSYICPVNVYPNV 341
>gi|427784859|gb|JAA57881.1| Putative protein artemis [Rhipicephalus pulchellus]
Length = 358
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 141/341 (41%), Gaps = 80/341 (23%)
Query: 418 WFLTHFHMDHYQGL--------TRSFHHGKIYCSLITARLVNMKIGIPW--DRLQVLPLN 467
+ L+H H DH QGL RS ++Y S ++ RL+ + W RL VLPL+
Sbjct: 29 FLLSHCHRDHMQGLDGCAFRRRLRSRRDVRLYVSAVSCRLLLNEPKYSWLRSRLSVLPLD 88
Query: 468 QKTTIA-----------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
TT+ + VT + ANHC GS++ L E + G VL+TGDFR +AS
Sbjct: 89 APTTLTVPADGTAGSEYAVVVTPIPANHCAGSVMFLLEGERGGTVLYTGDFRLDVGLAST 148
Query: 517 SVLQTC------PIHTLILDTTYCNP--LYDFPKQEAVIQFVIEAIQAESFNPK------ 562
C PI T +DTT C P Y +QE+ E + F PK
Sbjct: 149 LTSLHCDTGRVKPIDTAYVDTTLCRPDAAYVPTRQES------ERALVDFFAPKFAAGCS 202
Query: 563 -TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR-------VLKCLDFSKEDIQWFTT 614
L L G+ +G E LF +A K++V + V+KCL E TT
Sbjct: 203 LRLRLPGA-KLGYETLFASLALAFGVKVHVTRGQMSRYAGVADVVKCLTLDAE-----TT 256
Query: 615 NEH-ESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQ 673
H + + P V P+ F+ + +P R ++
Sbjct: 257 RIHADCECDLGPA----------------------CVTVKPSAMWFA--HRVAPSRLLER 292
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRD 714
T + + YS H S E+++ V+++ P + +V+ G D
Sbjct: 293 LTDGLHRLCYSTHASLAEVRDLVRYLQPRAVRANVHLRGVD 333
>gi|58380350|ref|XP_310480.2| AGAP000597-PA [Anopheles gambiae str. PEST]
gi|55243186|gb|EAA06670.2| AGAP000597-PA [Anopheles gambiae str. PEST]
Length = 406
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 152/319 (47%), Gaps = 37/319 (11%)
Query: 405 VDAF-KYLRGDCSHWFLTHFHMDHYQGLTRSFH-HGKIYCSLITARLVNMKIGIPWDRLQ 462
+D F + +R + +FL+H H+DH QGL + G +Y S TA +V ++ P L
Sbjct: 16 IDRFDQPVRDRATLFFLSHCHVDHMQGLPDAAPLPGPLYVSPHTAVIVGLRH--PQHTLV 73
Query: 463 VLPLNQKTTI-----AG----IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+P+ ++ + AG + V + A HCPGS++ FE + + +L+TGDFR S
Sbjct: 74 PVPVREQLNLTVRPPAGPAYELCVRTVPAEHCPGSVMFYFETKTVR-LLYTGDFRLSS-- 130
Query: 514 ASMSVLQTCPIHTLI--LDTTYCNPLYD-FPKQEAVIQFVIEA----IQAESFNPKTLFL 566
AS++ + + I LD+T+ + Y FP ++A + ++E + + N L+
Sbjct: 131 ASLTAIARYRVRPTIVYLDSTFLDRRYAYFPPRQASMDRIVELCSRWLAHDRRNVVALWP 190
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAK---FRVLKCLDFSKEDIQWFTTNEHESHIHV 623
SY G E LF ++A L ++I+V AA+ + LD FT + + IH
Sbjct: 191 PASY--GSEELFCQLADRLHQRIHVYAAQREPYNHFAVLD------HVFTDDAAGARIHA 242
Query: 624 MPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY 683
TL +R + ++ PT + + P WQQG+ + V Y
Sbjct: 243 CRGKTL-EHERACRAAKPEEKHPDFVLTIRPTARRWCNLRPGEPF--WQQGSGNLWYVCY 299
Query: 684 SEHCSFTELKEFVKFVSPE 702
S H S TEL EF++ + P+
Sbjct: 300 SSHASSTELVEFLRSLQPD 318
>gi|70924607|ref|XP_735125.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56508505|emb|CAH79157.1| hypothetical protein PC000135.03.0 [Plasmodium chabaudi chabaudi]
Length = 120
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+FLTHFH DHY + + F+ I+ S IT +L+ IG+ + L +N+ + ++
Sbjct: 17 YFLTHFHADHYMNINKHFNEN-IFSSTITKKLLINIIGVNEKYVHSLKVNKNYYLFNFEI 75
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
++ANHCPGS+II FE NG ++HTGDFR+S
Sbjct: 76 ILIDANHCPGSVIIYFEFSNGTKIIHTGDFRYS 108
>gi|311705711|gb|ADQ01121.1| artemis [Alouatta sara]
Length = 692
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 153/341 (44%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWETRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P + P +E + ++E + +
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFFQIPSREECLSGILELVGSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA-KFRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF +++ +++V+ KFR + DI T
Sbjct: 195 TQSPYHVVWLNCKAAYGYEYLFTNLSKEFGVQVHVDKPDKFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRSTQIHACRHPNAEEYFQRNKLPCGITTKNRIPLHTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|449549219|gb|EMD40185.1| hypothetical protein CERSUDRAFT_122252 [Ceriporiopsis subvermispora
B]
Length = 971
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 148/399 (37%), Gaps = 99/399 (24%)
Query: 402 PFRVDAFKYL---RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS--------------- 443
P RVD F + R + LTH H DH GL G++ CS
Sbjct: 15 PIRVDDFSAISSTREPAKLYLLTHTHTDHLNGLAARSFSGRVICSHDAKEMLLRHEIYSE 74
Query: 444 ----LITARLVNMKI--------------GIPW--DRLQVLPLNQKTTIA-------GID 476
+ R NMK GI + R + PL +T A +
Sbjct: 75 RALREMDLRAENMKTFRHLKVEPRKTGDGGISYAGSRDLLTPLAMQTPTAIKLNEKRSVT 134
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ-------TCP-- 523
+T L+ANHCPG+++ L E G A+LHTGDFR F + ++ LQ CP
Sbjct: 135 ITALDANHCPGAVMYLVEGDEG-AILHTGDFRAEAWFLDSLSRNPFLQRYIDKPFACPSV 193
Query: 524 --------------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS 569
+ + LDT + D P + +IE + F TLF I +
Sbjct: 194 DRQIEGKQSDVVQTLDVIYLDTACLLDIIDVPSKVDATSGLIELMAL--FPHTTLFFINA 251
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
+T G E + VA+ R K++V+ K+ V + T + + H +
Sbjct: 252 WTWGYEDILKAVAQAFRSKLHVDRYKYEVYSNISGDPFLRSVITRDAGSTRFHACERFDR 311
Query: 630 ASFKRLKHMSNQYAGRFSL--------------IVAFSP-----TGWTFSKGKKKSPGRR 670
F ++ Q A R + +V +P W + K ++
Sbjct: 312 CQFVKVDDQ-GQRAPRVATSSNASSSTNSQGAHVVYINPVTMGSAAWKLYLEETK---QK 367
Query: 671 WQQGTIIRY-EVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+QG + + VP S H EL+ FV P+ +IP+
Sbjct: 368 LRQGERVNHLLVPLSRHSPLPELRAFVSLFKPKRVIPNT 406
>gi|28316788|ref|NP_783614.1| protein artemis isoform 2 [Mus musculus]
gi|26331966|dbj|BAC29713.1| unnamed protein product [Mus musculus]
gi|26342607|dbj|BAC34960.1| unnamed protein product [Mus musculus]
Length = 603
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 54/342 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTT 614
+ +P ++L G E LF ++ L +++V+ LD K DI T
Sbjct: 195 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK--------LDMFKNMPDILHHLT 246
Query: 615 NEHESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
+ + IH W K +++Q I T W + +K +
Sbjct: 247 TDRNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 303 VIVRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 341
>gi|18490820|gb|AAH22254.1| DCLRE1C protein [Homo sapiens]
Length = 434
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 151/329 (45%), Gaps = 54/329 (16%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL ++ YCS +T L+ + K R+ + +
Sbjct: 29 YFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWKKRIISIEIE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR ++ E A M
Sbjct: 89 TPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAQGEAARM 147
Query: 517 SVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIGS 569
+L + I ++ LDTT+C+P Y P +E + V+E +++ + +P ++L
Sbjct: 148 ELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCK 207
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTTNEHESHIHVMPMW 627
G E LF ++ L +++VN LD + +I T + + IH
Sbjct: 208 AAYGYEYLFTNLSEELGVQVHVNK--------LDMFRNMPEILRHLTTDRNTQIHACRHP 259
Query: 628 TLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----Y 679
+ + + R + I++ P+ F + +K+ I+R Y
Sbjct: 260 KAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESSY 312
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+K+F+ ++ P + P+V
Sbjct: 313 RACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|119606655|gb|EAW86249.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_b [Homo sapiens]
Length = 434
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 151/329 (45%), Gaps = 54/329 (16%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL ++ YCS +T L+ + K R+ + +
Sbjct: 29 YFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKYRFWKKRIISIEIE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR ++ E A M
Sbjct: 89 APTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAQGEAARM 147
Query: 517 SVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIGS 569
+L + I ++ LDTT+C+P Y P +E + V+E +++ + +P ++L
Sbjct: 148 ELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPYHVVWLNCK 207
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTTNEHESHIHVMPMW 627
G E LF ++ L +++VN LD + +I T + + IH
Sbjct: 208 AAYGYEYLFTNLSEELGVQVHVNK--------LDMFRNMPEILHHLTTDRNTQIHACRHP 259
Query: 628 TLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----Y 679
+ + + R + I++ P+ F + +K+ I+R Y
Sbjct: 260 KAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESSY 312
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+K+F+ ++ P + P+V
Sbjct: 313 RACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|301789021|ref|XP_002929927.1| PREDICTED: protein artemis-like [Ailuropoda melanoleuca]
gi|281339274|gb|EFB14858.1| hypothetical protein PANDA_020236 [Ailuropoda melanoleuca]
Length = 692
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 152/340 (44%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVCLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIVELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +I+V+ K + + + DI T +
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVD--KLDMFRNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + + ++ P+ F + +K+
Sbjct: 249 RSTQIHACRHPKAEEYFHWNKLPCGIISKNRIPLHTISIKPSTMWFGERTRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ +SP ++ P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSHISPVNVYPNV 341
>gi|385862192|ref|NP_001245374.1| DNA cross-link repair 1C [Sus scrofa]
Length = 762
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 163/386 (42%), Gaps = 65/386 (16%)
Query: 374 DRKKHAAKDQSKGRKHKDIPT-WCCVPGTPFRVDAFKYLRGDCSHWFLTHFH-------- 424
DR+ A+ HK IP WC P + W L H
Sbjct: 20 DRENLRARAYFLSHCHKVIPGRWCLYLKGPLASLNSSRMVDGIKEWLLGSSHCGAVEMNP 79
Query: 425 ------MDHYQGLTRSFHHGKI--------YCSLITARLV--NMKIGIPWDRLQVLPLNQ 468
DH +GL S ++ YCS +T L+ N + R+ + +
Sbjct: 80 TRNHEVADHMKGLRASTLKRRLECSLKVSLYCSPVTRELLLTNPRYRFWEKRIVSIEVET 139
Query: 469 KTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASMS 517
T I+ ID VT L A HCPGS++ LF+ NG VL+TGDFR ++ E A M
Sbjct: 140 PTQISLIDEAPGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAKGEAARME 198
Query: 518 VLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIGSY 570
+L + I ++ LDTT+C+P Y P +E ++ ++E +++ + +P ++L
Sbjct: 199 LLHSGGSVKDIQSVYLDTTFCHPKYYQIPSREECLRGILELVRSWITRSPYHVVWLNCKA 258
Query: 571 TIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
G E LF ++ +++VN K + + + DI T + + H
Sbjct: 259 AYGYEYLFANLSEEFGVQVHVN--KLDMFRNMP----DILHHLTTDRGTQTHACRHPKAE 312
Query: 631 SFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----YEVP 682
+ + + + I++ P+ F + +K+ I+R Y
Sbjct: 313 EYSHWNKLPCGITSKNRIPLHIISIKPSTMWFGERTRKT-------NVIVRTGESSYRAC 365
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+K+F+ ++SP ++ P+V
Sbjct: 366 FSFHSSYSEIKDFLSYISPVNVYPNV 391
>gi|402467813|gb|EJW03056.1| hypothetical protein EDEG_02562, partial [Edhazardia aedis USNM
41457]
Length = 256
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLT-RSFHHGKIYCSLITARLVNMKIGI 456
VP T + +D F DC+ FL+HFH DHY GLT +S + KIYCS TA LV M++ +
Sbjct: 18 VPNTNYTIDCFYINVVDCTKHFLSHFHGDHYNGLTKKSSANKKIYCSETTANLVMMRLRV 77
Query: 457 PWDRLQVLPLNQKTTI-AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+ + +L + + + I V ++ANHCPG++ +F + G LH GDFR EE
Sbjct: 78 LKENIVILNMYKWEKLEKDIFVYLIDANHCPGAVCFIFSVK-GVFYLHCGDFRAGEEF 134
>gi|194227144|ref|XP_001498525.2| PREDICTED: protein artemis isoform 1 [Equus caballus]
Length = 693
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +++
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLSGIVELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +++V+ K + + + DI T +
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVD--KLDMFRNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
S IH + + + + + ++ P+ F + +K+
Sbjct: 249 RRSQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERSRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|268564045|ref|XP_002639002.1| Hypothetical protein CBG22248 [Caenorhabditis briggsae]
Length = 599
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 20/251 (7%)
Query: 372 GSDRKKHAAKDQSKGRKHKDIPTWC--CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQ 429
GSD S+ + + I C V G VD F C++ FLTH H DH +
Sbjct: 190 GSDETGCDVPVISRNPEERQIAKACNKIVIGDQISVDYF-VKSSKCNYHFLTHAHADHCR 248
Query: 430 GLTRSFHHGKIYCSLITARLVNMKIG--IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
G++ F + K+YCS TA+++++ +G +P D + L LN + VT ++ANHCPG
Sbjct: 249 GISAKFPN-KVYCSKETAKILHLVVGEPLPEDLIHPLELNIPYKFEHLQVTAIDANHCPG 307
Query: 488 SIIILFEPQ-----NGKAVLHTGDFRFSE------EMASMSVLQTCPIHTLILDTTYCNP 536
+++ +F+ G VL TGDFR E +S ++ + LD TY +
Sbjct: 308 AVMFVFQGPLIDEIAGGPVLCTGDFRAEASYMRQFENEKLSWVKDIDYSRIYLDNTYFSV 367
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
F +E Q + I +P T ++ + +G+ER+ ++ + + ++V K
Sbjct: 368 DVAFTSREISEQLLQNEIMD---HPDTDIVLPLHRLGRERIIENLSSKIFEPVFVYPEKL 424
Query: 597 RVLKCLDFSKE 607
+ K L F E
Sbjct: 425 AIGKALGFFYE 435
>gi|148675985|gb|EDL07932.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_e [Mus musculus]
Length = 617
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 54/342 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 30 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 89
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 90 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 148
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 149 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 208
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTT 614
+ +P ++L G E LF ++ L +++V+ LD K DI T
Sbjct: 209 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK--------LDMFKNMPDILHHLT 260
Query: 615 NEHESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
+ + IH W K +++Q I T W + +K +
Sbjct: 261 TDRNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 316
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 317 VIVRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 355
>gi|290993759|ref|XP_002679500.1| predicted protein [Naegleria gruberi]
gi|284093117|gb|EFC46756.1| predicted protein [Naegleria gruberi]
Length = 506
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 46/327 (14%)
Query: 408 FKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK-------IYCSLITARLV-NMKIGIPWD 459
FKY + ++FL+H H DH++GL F I C IT L+ + + D
Sbjct: 10 FKYYQ----YYFLSHCHSDHFKGLDDRFFQNASASDETCIVCHPITRNLLLALYPKLDKD 65
Query: 460 RLQVLPLNQKT--TIAGID--------VTCLEANHCPGSIIILFE------PQNGKAVLH 503
R+ + L Q T T+ G T L +NHCPGS + LFE P +++L+
Sbjct: 66 RILAIDLLQPTLLTVRGASSKEPKHFMCTLLSSNHCPGSCMFLFEIAKPGSPNEVESILY 125
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP--LYDFPKQEAVIQFVIEAIQAESFNP 561
GDFR ++ L++ I + +D T+C+P + PK+ I+ +I+ I+ E
Sbjct: 126 CGDFR-DPPSDTIQYLKSKKISKVYIDDTFCDPSNFLNLPKRSDSIKELIKLIEKERAKQ 184
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIY-----VNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ ++ I +G ER+ E+ + K++ +N + + + C+ KE+I FT ++
Sbjct: 185 RAVY-IALDLLGTERVLFELVSHFKTKLFCDYENLNPKRRKEIDCMKSLKENI--FTRDK 241
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGR----RWQ 672
++ I V+ T+ S L + + F ++G S R +Q
Sbjct: 242 EKTFIRVVSKTTIKSLAELLKKEDDCPLLICISTMFLKYLNKDTRGMSSSFDRGSSTYFQ 301
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFV 699
G +++ YS H S E+ +F++ V
Sbjct: 302 DGI---FKILYSFHSSHKEILKFLEQV 325
>gi|402469785|gb|EJW04420.1| hypothetical protein EDEG_04229, partial [Edhazardia aedis USNM
41457]
Length = 259
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLT-RSFHHGKIYCSLITARLVNMKIGI 456
VP T + +D F DC+ FL+HFH DHY GLT +S + KIYCS TA LV M++ +
Sbjct: 21 VPNTNYTIDCFYINVVDCTKHFLSHFHGDHYNGLTKKSSANKKIYCSETTANLVIMRLRV 80
Query: 457 PWDRLQVLPLNQKTTI-AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+ + +L + + + I V ++ANHCPG++ +F + G LH GDFR EE
Sbjct: 81 LKENIVILNMYKWEKLEKDIFVYLIDANHCPGAVCFIFSVK-GVFYLHCGDFRAGEEF 137
>gi|311705715|gb|ADQ01123.1| artemis [Saimiri sciureus]
Length = 692
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 151/341 (44%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ N K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKELLLTNPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIMSIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + IH++ LDTT+ +P + P +E + ++E + +
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIHSVYLDTTFFDPRFFQIPSREECLSGILELVGSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ +++V+ FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVDKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRSTQIHACRHPNAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|158966682|ref|NP_001103684.1| protein artemis isoform 3 [Mus musculus]
gi|80474682|gb|AAI08936.1| Dclre1c protein [Mus musculus]
Length = 486
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 155/342 (45%), Gaps = 54/342 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGSVMFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTT 614
+ +P ++L G E LF ++ L +++V+ LD K DI T
Sbjct: 195 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK--------LDMFKNMPDILHHLT 246
Query: 615 NEHESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
+ + IH W K +++Q I T W + +K +
Sbjct: 247 TDRNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 302
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 303 VIVRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 341
>gi|403278119|ref|XP_003930673.1| PREDICTED: protein artemis [Saimiri boliviensis boliviensis]
Length = 785
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 149/327 (45%), Gaps = 50/327 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKIGIPWDRLQVLPLN 467
+FL+H H DH +GL ++ YCS +T L+ N K R+ + +
Sbjct: 122 YFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKELLLTNPKYRFWEKRIMSIEIE 181
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR ++ E A M
Sbjct: 182 TPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAKGEAARM 240
Query: 517 SVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIGS 569
+L + IH++ LDTT+ +P + P +E + ++E + + + +P ++L
Sbjct: 241 ELLHSGGRVKDIHSVYLDTTFFDPRFFQIPSREECLSGILELVGSWITRSPYHVVWLNCK 300
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
G E LF ++ +++V+ K + + + DI T + + IH
Sbjct: 301 AAYGYEYLFTNLSEEFGVQVHVD--KLDMFRNM----PDILHHLTTDRSTQIHACRHPNA 354
Query: 630 ASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----YEV 681
+ + + + + ++ P+ F + +K+ I+R Y
Sbjct: 355 EEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKT-------NVIVRTGESSYRA 407
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+K+F+ ++ P + P+V
Sbjct: 408 CFSFHSSYSEIKDFLSYICPVNAYPNV 434
>gi|73949006|ref|XP_544251.2| PREDICTED: protein artemis isoform 1 [Canis lupus familiaris]
Length = 693
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 62/346 (17%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL-----TRSFHHG---KIYCSLITARLVNMKIGI 456
+D F +FL+H H DH +GL R ++YCS +T L+ +
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPALKRRLECSLKVRLYCSPVTKELL---LTS 72
Query: 457 P----WD-RLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAV 501
P W+ R+ + + T I +D VT L A HCPGS++ LF+ NG V
Sbjct: 73 PRYRFWEKRIISIEIETPTQIPLVDEASGEKEDIVVTLLPAGHCPGSVMFLFQGNNG-TV 131
Query: 502 LHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQ 555
L+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +E ++ + E ++
Sbjct: 132 LYTGDFRMAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSREECLRGISELVR 191
Query: 556 AE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFT 613
+ + +P ++L G E LF ++ +I+V+ K + + + DI
Sbjct: 192 SWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQIHVD--KLDMFRNM----PDILHHL 245
Query: 614 TNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL------IVAFSPTGWTFSKGKKKSP 667
T + + IH + H + G S ++ P+ F + +K+
Sbjct: 246 TTDRNTQIHAC---RHPKAEEYFHWNKLPCGAISKNRIPLHTISIKPSTMWFGERTRKT- 301
Query: 668 GRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 302 ------NVIVRTGESSYRACFSFHSSYSEIKDFLNYICPVNVYPNV 341
>gi|410214256|gb|JAA04347.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGIPWDRLQVLPLN-- 467
+FL+H H H +GL ++ YCS +T L+ + + Q++ +
Sbjct: 29 YFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELLLTSRKYRFWKKQIISIEIE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR + E A M
Sbjct: 89 TPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLVQGEAARM 147
Query: 517 SVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAESFNPKTLF----LI 567
+L + I ++ LDT C+P Y P +E + V+E +Q S+ ++L+ L
Sbjct: 148 ELLHSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ--SWITRSLYHVVWLN 205
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
G E LF ++ L +++VN FR + +I T + + IH
Sbjct: 206 CKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTTDRNTQIHACRH 258
Query: 627 WTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR----- 678
+ + + R + I++ P+ F + +K+ I+R
Sbjct: 259 PKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESS 311
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 312 YRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|410290018|gb|JAA23609.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGIPWDRLQVLPLN-- 467
+FL+H H H +GL ++ YCS +T L+ + + Q++ +
Sbjct: 29 YFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELLLTSRKYRFWKKQIISIEIE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR + E A M
Sbjct: 89 TPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLVQGEAARM 147
Query: 517 SVL----QTCPIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAESFNPKTLF----LI 567
+L + I ++ LDT C+P Y P +E + V+E +Q S+ ++L+ L
Sbjct: 148 ELLYSRGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ--SWITRSLYRVVWLN 205
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
G E LF ++ L +++VN FR + +I T + + IH
Sbjct: 206 CKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTTDRNTQIHACRH 258
Query: 627 WTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR----- 678
+ + + R + I++ P+ F + +K+ I+R
Sbjct: 259 PKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESS 311
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 312 YRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|410337689|gb|JAA37791.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 147/330 (44%), Gaps = 56/330 (16%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGIPWDRLQVLPLN-- 467
+FL+H H H +GL ++ YCS +T L+ + + Q++ +
Sbjct: 29 YFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELLLTSRKYRFWKKQIISIEIE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR + E A M
Sbjct: 89 TPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLVQGEAARM 147
Query: 517 SVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAESFNPKTLF----LI 567
+L + I ++ LDT C+P Y P +E + V+E +Q S+ ++L+ L
Sbjct: 148 ELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLSGVLELVQ--SWITRSLYRVVWLN 205
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
G E LF ++ L +++VN FR + +I T + + IH
Sbjct: 206 CKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTTDRNTQIHACRH 258
Query: 627 WTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR----- 678
+ + + R + I++ P+ F + +K+ I+R
Sbjct: 259 PKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESS 311
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 312 YRACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|22023549|gb|AAM89119.1|AF387731_1 SNM1-like protein [Mus musculus]
Length = 705
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 153/340 (45%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L HCP S + LF+ NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEQEQVGVTLLPPGHCPRSXVFLFQGSNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQA-E 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 135 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 195 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM----PDILHHLTTD 248
Query: 617 HESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
+ IH W K +++Q I T W + +K +
Sbjct: 249 RNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI 304
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 305 VRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 341
>gi|126340452|ref|XP_001369072.1| PREDICTED: protein artemis-like [Monodelphis domestica]
Length = 681
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 147/326 (45%), Gaps = 48/326 (14%)
Query: 418 WFLTHFHMDHYQGL-----------TRSFHHGKIYCSLITARLV--NMKIGIPWDRLQVL 464
+FL+H H DH +GL + H +YCS +T L+ + K R+ L
Sbjct: 29 YFLSHCHKDHMKGLRAPPLKRRLECSLKVH---LYCSPVTKELLLTSPKYSFWEKRIIAL 85
Query: 465 PLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EM 513
+ T I+ ID VT L A HCPGS++ LF+ NG VL+TGDFR ++ E
Sbjct: 86 EIETPTQISLIDEASGEKEEVVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLAKGEA 144
Query: 514 ASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFL 566
A M L + I ++ LDTT+ +P Y P + ++ ++E ++ + +P ++L
Sbjct: 145 ARMEFLHSGSRVKDIQSVYLDTTFFDPKFYQIPSRVECLKGILELVRNWITLSPYHVVWL 204
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
G E LF ++ +++VN K + K + DI T + + IH
Sbjct: 205 NCKAAYGYEYLFTNLSEEFGTQVHVN--KLDMFKNM----PDILHHITTDRNTQIHACRH 258
Query: 627 WTLASFKRLKHMSNQYAGRFSL---IVAFSP-TGWTFSKGKKKSPGRRWQQGTIIRYEVP 682
F + + + +++ P T W + +K + R Q + Y
Sbjct: 259 PQAEEFFHWNRLPCGIISKTGIPLHVISIKPSTMWFGERTRKTNVIVRTGQSS---YRAC 315
Query: 683 YSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+ +F+ ++ P + P+V
Sbjct: 316 FSFHSSYSEIMDFLSYIRPVNAYPNV 341
>gi|224034545|gb|ACN36348.1| unknown [Zea mays]
Length = 336
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 39/244 (15%)
Query: 490 IILFEPQNGKAVLHTGDFRFS--------EEMASMSVLQTCPIHTLILDTTYCNPLYDFP 541
+ LF G +L+TGDFR+ + + L I L LD TYC+P +FP
Sbjct: 1 MYLFRGDLG-CMLYTGDFRWELGCDEARRAKQDLLDALDGDTIDVLYLDNTYCHPSLNFP 59
Query: 542 KQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC 601
+ V + VI+ I++ +P +IG T+GKE L L ++R L+ KI+V + + +
Sbjct: 60 PRPVVAEQVIDIIRS---HPDHEVIIGVDTLGKEDLLLHISRALQTKIWVWPQRLQTIHL 116
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK 661
L E+ FTT + I +P +++ + L+ + N ++ + P W S+
Sbjct: 117 LGID-ENRDIFTTQTSLTRIRAVPRYSV-TIDNLEAL-NTVCPTIGILPSAIPCLWKSSE 173
Query: 662 GKKKSPGR----------RWQQGTII--------------RYEVPYSEHCSFTELKEFVK 697
GK KS GR R + T + Y +PYSEH F+EL++F+
Sbjct: 174 GKAKSKGRSSVKSIRSSGRGEGLTEMDCNPLSPPKLFDKDSYTLPYSEHACFSELEDFMH 233
Query: 698 FVSP 701
V P
Sbjct: 234 TVRP 237
>gi|76154133|gb|AAX25636.2| SJCHGC03696 protein [Schistosoma japonicum]
Length = 166
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLI 445
K K P + +P T VDAF Y + G C+++FL+HFH DH++G+ ++F G IYCS +
Sbjct: 54 KFKKCPFYKWIPDTSITVDAFCYNDIPG-CTYYFLSHFHSDHFKGIHKNFK-GHIYCSEV 111
Query: 446 TARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE 494
T L+ G+ + VL L ++T I ++VT L+ANHCPGS++ +F
Sbjct: 112 TKNLLRDAYGLGL-VISVLELEKRTLIGDVEVTALDANHCPGSLMFIFH 159
>gi|443695471|gb|ELT96369.1| hypothetical protein CAPTEDRAFT_147464 [Capitella teleta]
Length = 265
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 118/241 (48%), Gaps = 35/241 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRS-FHHG-------KIYCSLITARLVNMK--- 453
+D F + S +FL+H H DH GL+ S F + ++YCS +T L++
Sbjct: 16 LDRFDGVNMQSSAYFLSHKHADHMLGLSNSSFAYRLSSNKNIRLYCSPVTKALLSFDSRY 75
Query: 454 -------IGIPWDRLQVLPLNQ-KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
+ + D VL +N ++ + VT L A HCPGS++ LFE G VL+TG
Sbjct: 76 SGLMPFIVALDLDVPNVLRINNPQSDKYEVTVTLLSAAHCPGSVMFLFEGNQG-TVLYTG 134
Query: 506 DFRFS-EEMASMSVLQTCP-----IHTLILDTTYCNPLYDF-PKQEAVIQFVIEAIQA-- 556
DFR +++ M L P + +L +DTT+C P F P ++ + V++ +Q
Sbjct: 135 DFRLCVQDVMQMDALHQAPGKPKTLTSLYIDTTFCVPQALFIPSRQECVSAVLDIMQEWF 194
Query: 557 -ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
ES N +F++ +G E LF+E + ++V+ A++ + + D+ F TN
Sbjct: 195 DESPN-HCVFILHKANLGYEHLFMEACKHFGMPVHVDEARYNQYQQI----ADLSDFVTN 249
Query: 616 E 616
+
Sbjct: 250 D 250
>gi|303285386|ref|XP_003061983.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456394|gb|EEH53695.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 629
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 84/186 (45%), Gaps = 30/186 (16%)
Query: 418 WFLTHFHMDHYQGLTRSFHH--GKIYCSLITARLVNMK------------IGIPWDRLQV 463
+FLTH H DH GL + G IYCS +T L+ K + + R V
Sbjct: 59 YFLTHAHSDHLVGLNGEWESRGGAIYCSPVTRALLFRKHPALETRADVVVVALSLGRPHV 118
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV----- 518
+ L + VT L+A HCPGS+ LFE G+ + HTGDFR +
Sbjct: 119 ITLQGGELLT---VTPLDAGHCPGSVGFLFEGACGR-IYHTGDFRREDWCGRGGAAAAAA 174
Query: 519 ------LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTI 572
L P+ L+LD TY NP YDFP + + V+ AI +E+ +G ++
Sbjct: 175 SAIPECLTRAPLDLLLLDNTYANPTYDFPARSDAAEEVL-AIVSEATARGCDVYVGIDSL 233
Query: 573 GKERLF 578
GKE L
Sbjct: 234 GKEALL 239
>gi|351713833|gb|EHB16752.1| Protein artemis, partial [Heterocephalus glaber]
Length = 677
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 50/332 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 15 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVHLYCSPVTKELLLTSPKY 74
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 75 RFWEKRIVSIEIETPTQISLVDEASGEEEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 133
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P + + ++E +++
Sbjct: 134 GDFRLAKGEAARMELLHSGGRVRDIQSVYLDTTFCDPRFYQIPSRGECLSGILELVRSWI 193
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF +++ L +++V+ K + + + DI T +
Sbjct: 194 TRSPYHVVWLNCKAAYGYEYLFTKLSEELGVQVHVD--KLDMFRNM----PDILHHLTTD 247
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + R + ++ P+ F + +K+
Sbjct: 248 RSTQIHACRHPKAEEYWQWNKLPCGITSRNKIPLRTISIKPSTMWFGERSRKT------- 300
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVS 700
I+R Y +S H S++E+K+F+ ++S
Sbjct: 301 NVIVRTGESSYRACFSFHSSYSEIKDFLSYLS 332
>gi|410248332|gb|JAA12133.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 692
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 148/328 (45%), Gaps = 52/328 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLVNMKIGIPWDRLQVLPLN-- 467
+FL+H H H +GL ++ YCS +T L+ + + Q++ +
Sbjct: 29 YFLSHCHKGHMKGLRAPTLKRRLECSLEVYLYCSPVTKELLLTSRKYRFWKKQIISIEIE 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE-EMASM 516
T I+ +D VT L A HCPGS++ LF+ NG VL+TGDFR + E A M
Sbjct: 89 TPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYTGDFRLVQGEAARM 147
Query: 517 SVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP-KTLFLIGS 569
+L + I ++ LDT C+P Y P +E ++ V+E +++ + +P ++L
Sbjct: 148 ELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSREECLRGVLELVRSWITRSPYHVVWLNCK 207
Query: 570 YTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT 628
G E LF ++ L +++VN FR + +I T + + IH
Sbjct: 208 AAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTTDRNTQIHACRHPK 260
Query: 629 LASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----YE 680
+ + + R + I++ P+ F + +K+ I+R Y
Sbjct: 261 AEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIVRTGESSYR 313
Query: 681 VPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+K+F+ ++ P + P+V
Sbjct: 314 ACFSFHSSYSEIKDFLSYLCPVNAYPNV 341
>gi|344277985|ref|XP_003410777.1| PREDICTED: protein artemis-like [Loxodonta africana]
Length = 691
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 50/333 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLDCSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ ID VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIIAIEVETPTQISLIDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P +E + ++E +
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGILELVGGWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +++V+ K + + + DI T +
Sbjct: 195 NRSPYHVVWLNCKAAYGYEYLFTNLSEQFGVQVHVD--KLDMFRNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + R + ++ P+ F + +K+
Sbjct: 249 RGTQIHACRHPKAEEYFQGNKLPCGMTSRNRIPLHTISIKPSTMWFGERTRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSP 701
I+R Y +S H S++E+K+F+ ++ P
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSYICP 334
>gi|432100277|gb|ELK29045.1| Protein artemis [Myotis davidii]
Length = 691
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 152/340 (44%), Gaps = 50/340 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGDNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVL----QTCPIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+P Y P + + ++E +++
Sbjct: 135 GDFRLAKGEAARMELLHCGGRVKDIQSVYLDTTFCDPKFYQIPSRGECLSGILELVRSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ +++V+ K + + + DI T +
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVD--KLDMFRNM----PDILHHLTTD 248
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQ 673
+ IH + + + + + ++ P+ F + +K+
Sbjct: 249 RSTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKT------- 301
Query: 674 GTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|413921528|gb|AFW61460.1| hypothetical protein ZEAMMB73_267019 [Zea mays]
Length = 653
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 16/208 (7%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK----IYCSLITARLVNMKIG 455
G PF VD + H FLTH H DH G+T + +Y S +T L+ ++I
Sbjct: 8 GLPFAVDTWTPASALKRHRFLTHAHRDHLAGITATSAVSASSSPVYASRLTI-LIALRIF 66
Query: 456 IPWDRLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
DR + PL VT ++ANHCPG+++ LFE G VLHTGD R
Sbjct: 67 PQLDRAAFVELDVGQPPLRVPDPDGDFTVTAVDANHCPGAVMFLFEGPFGD-VLHTGDCR 125
Query: 509 FSEE-MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
+ + +++++ I L LD T+ FP + I+ VI+ + P ++L+
Sbjct: 126 LTPDCLSALTSHLARRIDYLFLDCTFARCSLRFPATQDSIRQVIDCVWKHPSAP-VVYLV 184
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAK 595
+G+E + +EV++ KIYV+ K
Sbjct: 185 CDM-LGQEDVLVEVSKAFGSKIYVDREK 211
>gi|311705723|gb|ADQ01127.1| artemis [Callicebus cupreus]
Length = 692
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 149/341 (43%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIMSIEIETPTQIPLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+C+ Y P +E + ++E + +
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDRRFYQIPSREECLSGILELVGSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ +++V+ FR + DI T
Sbjct: 195 TQSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVDKLDMFRNMP-------DILRHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRNTQIHACRHPNAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|307191536|gb|EFN75039.1| Artemis protein [Camponotus floridanus]
Length = 318
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 34/252 (13%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF------HHGKIYCSLITARLVN 451
+PG VD F + S +FL+H H DH QG+ F ++ +YCS I+ +
Sbjct: 11 IPGIS--VDRFDGENLNSSAYFLSHCHTDHMQGINYQFFKHLQQYNKYLYCSRISKLFLK 68
Query: 452 MKIGIPWDRLQVLPLNQKTTIAG---------IDVTCLEANHCPGSIIILFEPQNGKAVL 502
K ++ L LN K I + VTC+ A HCPGS++ LFE K VL
Sbjct: 69 AKDYYIESCVKDLSLNIKVCIEYKNKDNDKNILFVTCISAGHCPGSVMFLFETD--KLVL 126
Query: 503 HTGDFRFSEE----MASMSVLQTCPIH-----TLILDTTYCNPLY-DFP-KQEAVIQFVI 551
+TGDFR + E +AS+ + +H + LDTT+ + + FP ++E++ + I
Sbjct: 127 YTGDFRINPEDYKKIASLHSYENYNVHPKKLAKMYLDTTFLDSNFRSFPTRKESIKKICI 186
Query: 552 EAIQAESFNPKTLFLI-GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ 610
E + +P+ + ++ S G E L++E++R+ I+V + C+ + I
Sbjct: 187 EIEKWLKKSPRNVVVLECSALYGSEFLYVELSRMFNTCIHVKDYVYESYYCIADIADSI- 245
Query: 611 WFTTNEHESHIH 622
T N + IH
Sbjct: 246 --TNNPQATRIH 255
>gi|261865341|gb|ACY01922.1| hypothetical protein [Beta vulgaris]
Length = 551
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 28/215 (13%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH +T S+ IY +L+T L+ +
Sbjct: 8 GLPFSVDTWTPNSKFKRHHFLTHAHKDHCSNIT-SYFSFPIYSTLLTKSLILCYFPQLDE 66
Query: 460 RLQV-LPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA 514
L V + + Q + VT +ANHCPG+++ LFE + G +LHTGD R + E
Sbjct: 67 SLFVQIEVGQSIIVDDPDGAFTVTAFDANHCPGAVMFLFEGEFGN-ILHTGDCRLTPE-- 123
Query: 515 SMSVLQTCP--------------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
LQ P + + LD T+ L D P +++ +Q VI I
Sbjct: 124 ---CLQNLPEKYIARKGKEPSSQLDFVFLDCTFGKSLMDIPSKQSALQQVINCIWKHPDV 180
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK 595
P T++L + +G+E + ++V + KIYV+ AK
Sbjct: 181 P-TVYLTCN-MLGQEEVLVKVFQTFGSKIYVDKAK 213
>gi|170101134|ref|XP_001881784.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643139|gb|EDR07392.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 976
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 155/394 (39%), Gaps = 87/394 (22%)
Query: 393 PTWCCVPGTPFRVDAF------KYLRGDCSHWFLTHFHMDHYQGLT-RSFHHGKIYCSLI 445
P C+P RVD F + L + LTH H DH GL+ +SF H +YCS
Sbjct: 6 PFNACIPPYNIRVDEFASSAALEELGTTPALHLLTHTHSDHINGLSAKSFGH-TVYCSQD 64
Query: 446 TARLV-------------------------NMKI-------GIPW-----DRLQVLPLNQ 468
++ ++K+ G + D L+ LPL+
Sbjct: 65 AKEMLLRHEVFAERELHELELRAEKVRTYSHLKVDPLLFPDGTMYYTGSRDLLKTLPLHT 124
Query: 469 KTT--IAG---IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVL 519
T I+G + +T L+ANHCPG+++ L E Q G A+LHTGDFR F + + L
Sbjct: 125 PTKMDISGDEAVTITLLDANHCPGAVMFLIEGQRG-AILHTGDFRAEPWFLDSIVRNPFL 183
Query: 520 Q--------TCP------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
Q + P + + LDT P + +IE ++ F F
Sbjct: 184 QPYLYQGPDSVPFTISKTLEAIYLDTACVLSPLAVPTKGCATSGLIELMKV--FPSSVYF 241
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHES-HIHVM 624
I S+T G E + +A+ + KI+V+ K+ + + L S ++ TT + S H
Sbjct: 242 FINSWTWGYEDVLKAIAQSFQSKIHVDRYKYSIYQHL--SDPFLRLITTRDSSSTRFHAC 299
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLI---------VAFSPTGWTFSKGKKKSPGRRWQQG- 674
+ + + + + Y+ S + V+ W K+ R G
Sbjct: 300 ERFHRCEYVMVDNEQDNYSNAVSHMGKRVIYVNPVSMGSVSWDLYLRDTKA---RLNAGE 356
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I VP S H EL+ FV P ++P+
Sbjct: 357 EINNLLVPLSRHSPLPELQAFVSLFRPRRVVPNT 390
>gi|218189475|gb|EEC71902.1| hypothetical protein OsI_04671 [Oryza sativa Indica Group]
Length = 642
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 25/222 (11%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL---VNMKIGI 456
G PF VD + H FLTH H DH + G+ ++ RL + ++
Sbjct: 8 GLPFAVDTWGPSSRRRRHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLALRHFP 67
Query: 457 PWDRLQVLPLNQKTTI------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+R + + + T+ VT +ANHCPG+++ LFE Q G ++LHTGD R +
Sbjct: 68 RLERGEFVEMEVGKTVVVDDPAGAFSVTAYDANHCPGAVMFLFEGQFG-SILHTGDCRLT 126
Query: 511 EE---------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNP 561
+ +A C + + LD T+ P +E+ IQ VI I P
Sbjct: 127 PDCVQNLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIWKHPHAP 186
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYV----NAAKFRVL 599
+ +G E + +EV+R KIYV N+ FR L
Sbjct: 187 --FVYLACDLLGHEEILIEVSRTFGSKIYVDKRRNSDCFRAL 226
>gi|440798159|gb|ELR19227.1| hypothetical protein ACA1_263970 [Acanthamoeba castellanii str.
Neff]
Length = 180
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 102/223 (45%), Gaps = 60/223 (26%)
Query: 367 RKSFSGSDRKKHAAKDQSKG------RKHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFL 420
R+ +G KK A + G RK K P + + GT VD F+Y
Sbjct: 3 RERGTGGAYKKRAGGGSTWGGKTKRERKEKPCPAFKKINGTNIIVDGFQY---------- 52
Query: 421 THFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCL 480
K Y ITA+L+ +K+G+ + ++ L + + G +VT L
Sbjct: 53 ------------------KSYS--ITAKLMFIKLGVSPNYVRPLSMFTPHMVEGTEVTLL 92
Query: 481 EANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDF 540
ANHCPG++++LF+ +G+ +LH GDFR+ M S L+ IH
Sbjct: 93 PANHCPGAVLLLFK-VDGRYILHVGDFRYHPNMQSYDELRRNEIH--------------- 136
Query: 541 PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ V++ V+ + ES TLFL+G+Y IGKE +F +AR
Sbjct: 137 ---KRVVELVLRE-KRES----TLFLVGTYCIGKEEVFCGIAR 171
>gi|242077909|ref|XP_002443723.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor]
gi|241940073|gb|EES13218.1| hypothetical protein SORBIDRAFT_07g000830 [Sorghum bicolor]
Length = 699
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 18/205 (8%)
Query: 402 PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK----IYCSLITARLVNMKIGIP 457
PF VD + H FLTH H DH G+ + IY S +T L+ ++I
Sbjct: 10 PFAVDTWTPASSLKRHRFLTHAHRDHLVGIAATSAVSASSSPIYASRLTI-LIALRIFPQ 68
Query: 458 WDRLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
DR + PL VT L+ANHCPG+++ LFE G AVLHTGD R +
Sbjct: 69 LDRAAFVELDVGDPPLRVPDPDGDFTVTALDANHCPGAVMFLFEGPFG-AVLHTGDCRLT 127
Query: 511 EEMASMSV---LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
+ + L I L LD T+ FP +E I+ VI + P +
Sbjct: 128 PDCLTALTPPHLARGRIDYLFLDCTFARCALRFPTKEDSIRQVINCVWKHPSAPAVYLVC 187
Query: 568 GSYTIGKERLFLEVARVLRKKIYVN 592
+G+E + + V+R KIYV+
Sbjct: 188 D--MLGQEDVLIGVSRAFGSKIYVD 210
>gi|340372537|ref|XP_003384800.1| PREDICTED: protein artemis-like [Amphimedon queenslandica]
Length = 606
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 140/327 (42%), Gaps = 50/327 (15%)
Query: 418 WFLTHFHMDHYQGL-----TRSFHHGKI--YCSLIT----------ARLVNMKIGIPWDR 460
+FL+H H DH GL + KI YCS +T + L+ + +P
Sbjct: 30 FFLSHCHKDHMSGLDSDELLKVLKELKIDFYCSEVTHALLSNDPGFSHLMPYLVSVPVGE 89
Query: 461 LQVLPLN---QKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS 517
L LN + + ++VT L A HCPGS++ LF+ G VL+TGDFR S+S
Sbjct: 90 TISLKLNTFRNEDQVVTVNVTLLPAGHCPGSVMFLFQGDAGN-VLYTGDFRL-----SLS 143
Query: 518 VLQTC-PIHT----------LILDTTYCNP-LYDFPKQEAVIQFVIEAIQA-ESFNPKTL 564
++ C P+HT L LDTT+C+P + ++ +++ ++ + P +
Sbjct: 144 DIRGCGPLHTDDGKVIEIKALYLDTTFCHPKSTNIISRDETRDIILKKVKEWLAQGPDNI 203
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH-- 622
+ + G E + + ++ L I+ K R L + Q T + + + IH
Sbjct: 204 VRLDCRSFGYEHILMSLSLQLDTNIHTAGWKIRSYSVL---PQVHQCLTEDGNSTRIHAC 260
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTIIRYEV 681
V T + +L + G I+ P+ W S K + + V
Sbjct: 261 VNKKGTQSVSGKLPCGATPTKGGTPNILTIKPSAQWFLSNDKPHPSAPEFN-----LFRV 315
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S H S++E+ E V ++ P I+P V
Sbjct: 316 LHSMHSSYSEIIEVVSYLCPVSIVPCV 342
>gi|26351057|dbj|BAC39165.1| unnamed protein product [Mus musculus]
Length = 486
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 127/315 (40%), Gaps = 77/315 (24%)
Query: 398 VPGTPFRVDAFKYLR-GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
+P TP VD + R G +FLTH H DH GL+ ++ +YCS IT
Sbjct: 6 IPQTPIAVDFWSLRRAGSARLFFLTHMHCDHTVGLSSTWAR-PLYCSPITG--------- 55
Query: 457 PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
LPL A GDFR++ M
Sbjct: 56 -------LPL---------------------------------ASSPAGDFRYTPSMLKE 75
Query: 517 SVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
L IHTL LD T CNP P ++ Q +++ I+ P+ IG Y++GKE
Sbjct: 76 PALILGKQIHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKIGLYSLGKE 132
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
L ++A R + ++ + +++ L + D+ FT E IH + +
Sbjct: 133 SLLEQLALEFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV------DHTEI 182
Query: 636 KHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEF 695
H + + +A PT K +SP +I Y VPYS+H S++EL+ F
Sbjct: 183 CHSAMLQWNQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHSSYSELRAF 230
Query: 696 VKFVSPEHIIPSVNN 710
V + P ++P V+
Sbjct: 231 VAALRPCQVVPIVHQ 245
>gi|326497347|dbj|BAK02258.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532736|dbj|BAJ89213.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 638
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 135/325 (41%), Gaps = 27/325 (8%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHY--QGLTRSFHHGKIYCSLITARLVNMKIGIP 457
G PF VD + H FLTH H DH G +Y + +T L ++
Sbjct: 8 GLPFAVDTWGPSSRPRRHRFLTHAHRDHLVGAAGAGPGGGGAVYATRLTLSLA-LRHFPQ 66
Query: 458 WDRLQVLPLNQKTTI------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
D+ + + + + TI VT +ANHCPG+++ LFE + G ++LHTGD R +
Sbjct: 67 LDQGEFVEVEEGRTIEVDDPAGAFSVTAYDANHCPGAVMFLFEGEFG-SILHTGDCRLTP 125
Query: 512 EMASMSVLQ---------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK 562
+ A L+ C + + LD T+ P +E IQ VI I P
Sbjct: 126 DCAQNLPLKYIAKKGKENVCRLDFVFLDCTFSKCFLKLPSKELAIQQVIACIWKHPDAP- 184
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR-VLKCLDFSKEDIQWFTTNEHESHI 621
+ +G E + +EV+R KIYV+ + K L + +I T++
Sbjct: 185 -FVYLACDLLGHEEILVEVSRTFGSKIYVDVRRNSDCFKALSLTAPEI---ITDDPSCRF 240
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG-RRWQQGTIIRYE 680
++ L K + A + P+ ++ G+ + P QQ +
Sbjct: 241 QIVGFHHLYD-NASKKLEGARASLQPEPLFIRPSTQWYACGRNQKPSLTEAQQDDFGIWH 299
Query: 681 VPYSEHCSFTELKEFVKFVSPEHII 705
V +S H S EL++ ++ + P+ +I
Sbjct: 300 VCFSIHSSRDELEQAMQLLQPQWVI 324
>gi|47218348|emb|CAG04180.1| unnamed protein product [Tetraodon nigroviridis]
Length = 513
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 159/360 (44%), Gaps = 57/360 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKIGIPWDRLQV-LPL 466
+FL+H H DH +GL K+ YCS +T L+ + K W+ V L L
Sbjct: 29 YFLSHCHKDHMKGLKGPVLKRKLQLSRTVRLYCSYVTRELLLSSPKYAF-WESYTVPLEL 87
Query: 467 NQKTTIAGID----------VTCLEANHCPGSII----ILFEPQNGKAVLHTGDFRFSE- 511
+ T I+ +D VT L A HCPGS++ LFE G VL+TGDFRFS
Sbjct: 88 DSPTQISLVDETTGEKEDLVVTLLSAGHCPGSVMQVTAFLFEGSQG-TVLYTGDFRFSTG 146
Query: 512 EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAI-QAESFNPKTL- 564
+++ M L + I ++ LD+T+ +P + P ++A ++ ++E + + S +P +
Sbjct: 147 DISRMDHLHSGSRVKDIQSIYLDSTFYDPKFFRIPTRDACLKGIMELVGKWISQSPHHVA 206
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKF--RVLKCLDFSKED--IQWFTTNEHESH 620
+L G E LF + +I+VN+ K ++ L++ D Q + +
Sbjct: 207 WLNCKAAYGYEYLFTHLGEEFNTQIHVNSLKMFKKMPDILNYLTTDRRTQLARLSAPQGG 266
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTII--- 677
+ + P RL G I++ P+ F + +KS Q+ T +
Sbjct: 267 VGLRPFEEFFPSSRLPCGCFAPDGTPLHIISIKPSTMWFGERTRKSSVIIKQEKTRMPDD 326
Query: 678 ---------------RYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSL 722
+ +S H S++ELK+F+ ++ P +I PSV G+ A +L
Sbjct: 327 ADVFGRIGCGRTGGSSFRACFSFHASYSELKDFLSYLQPVNIYPSVIPVGQTLAEVTQTL 386
>gi|58260790|ref|XP_567805.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117269|ref|XP_772861.1| hypothetical protein CNBK2320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255479|gb|EAL18214.1| hypothetical protein CNBK2320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229886|gb|AAW46288.1| expressed protein [Cryptococcus neoformans var. neoformans JEC21]
Length = 758
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 139/368 (37%), Gaps = 86/368 (23%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV--------------------------- 450
+ L+H H DH GLT F G I CS T R++
Sbjct: 55 FLLSHTHADHVVGLTSDFT-GHIICSPDTKRMLLDLEPERERQWLDKGIREIKTKRFGGL 113
Query: 451 NMKIGIPW---DRLQVLPLNQ-KTTIAG--------IDVTCLEANHCPGSIIILFEPQNG 498
K GI DR++ LP Q K G I +T L+ANHCPGS + L +
Sbjct: 114 AAKRGIHGKVVDRIEALPYGQPKVFTLGYESEKPQEITITLLDANHCPGSTMFLIT-SDK 172
Query: 499 KAVLHTGDFR--------------FSEEMASMSVLQTCP---------IHTLILDTTYCN 535
KAVLHTGD R E +A SV Q + + LDT
Sbjct: 173 KAVLHTGDVRADTRFIDSLKRNPILQEFLAPASVYQKAKSLVGGGRRVLDRIYLDTAAIL 232
Query: 536 PLYDFPKQEAVIQFVIEAIQAESFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
D P +E V+Q E ++ P+ T F + ++ G E + EVAR +K++V+
Sbjct: 233 GTGDMPDKEPVLQ---ELVKIMGLYPEDTTFFLNTWCFGWEDVIKEVARYFNEKVHVDRY 289
Query: 595 KFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT-LASFKRLKHMSNQYAGRFSL----- 648
K ++ + + TT+ HE+ H + + +R S + +
Sbjct: 290 KRQIYSAVRSDPFLLNCTTTDPHETRFHACERFAKCVACRRFDDESGKPVYNLNKMIVHV 349
Query: 649 -IVAFSPTGWTFSKG-------KKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVS 700
+V GW + K G W + ++P S H S EL+ VK
Sbjct: 350 NMVEVKQVGWDSRRQGFMETLFKAAGKGGPWP----LNIDIPISRHSSLPELQSLVKLFK 405
Query: 701 PEHIIPSV 708
P + P+
Sbjct: 406 PLGLTPNT 413
>gi|242802706|ref|XP_002484025.1| DNA repair protein, putative [Talaromyces stipitatus ATCC 10500]
gi|218717370|gb|EED16791.1| DNA repair protein, putative [Talaromyces stipitatus ATCC 10500]
Length = 635
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL S IYCS ++ L+ N GI R
Sbjct: 26 FLSHVHSDHLQGL-ESLRSPFIYCSAVSRELLLRLEKYPHRMNFSKGILEARKQHYGHLA 84
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF-SEE 512
L+ +PLN T I I VT L+ANHC G+++ L E Q GKA+L+TGD R S
Sbjct: 85 KILRPIPLNTPTEIELTPLQRIRVTLLDANHCAGAVMFLIEGQ-GKAILYTGDIRAESWW 143
Query: 513 MASMS-----VLQTCPIHTL---ILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFNP 561
+ S++ V C + TL LDTT+ N FP + ++ ++E +Q +
Sbjct: 144 VNSLTRHPALVPYACGLKTLDNIYLDTTFAVKSNIYRYFPSKAEGVKELLEQVQ--RYPK 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F + ++T G E ++ ++ L K++V+ ++ + K L
Sbjct: 202 DTIFYLRAWTFGYEEVWQALSAFLDSKVHVDRYQYSLYKSL 242
>gi|242055193|ref|XP_002456742.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
gi|241928717|gb|EES01862.1| hypothetical protein SORBIDRAFT_03g041750 [Sorghum bicolor]
Length = 619
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 137/331 (41%), Gaps = 41/331 (12%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHY-QGLTRSFHHGKIYCSLITARL--------- 449
G PF VD + H FLTH H DH G +Y + +T L
Sbjct: 8 GLPFAVDTWGPSARRRRHRFLTHAHRDHLVGAGADIDGGGTVYATRLTLHLALRHFPQLG 67
Query: 450 ----VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
V M++G + + L+ T VT +ANHCPG+++ LFE + G +LHTG
Sbjct: 68 SWEFVEMEVG------RTVELDDPT--GAFSVTTYDANHCPGAVMFLFEGKFG-TILHTG 118
Query: 506 DFRFSEEMASMSVLQ---------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
D R + + ++ C + + LD T+ P +E+ I+ VI I
Sbjct: 119 DCRLTPDCVQNLPMKYITKKGNNNICRLDFVFLDCTFSKCFLKLPSKESAIRQVISCIWK 178
Query: 557 ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
P + +G E + +EV+R KIYV+ + K L + +I T++
Sbjct: 179 HPHAP--FVFLACDLLGHEDILVEVSRTFGSKIYVD-WRLDCFKALSLTAPEI---ITDD 232
Query: 617 HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSP-TGWTFSKGKKKSPG-RRWQQG 674
S ++ L + K ++ A + P T W S +K+ P +Q
Sbjct: 233 SSSRFQMVGFHQLYD-RASKELAVARANLQPEPLFIRPSTQWYASCARKQKPSLTEAEQD 291
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHII 705
+ V +S H S EL++ ++ + P+ +I
Sbjct: 292 EFGIWHVCFSIHSSRDELEQALQLLQPQWVI 322
>gi|20161430|dbj|BAB90354.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|21952820|dbj|BAC06236.1| DNA ligase-like [Oryza sativa Japonica Group]
gi|125572866|gb|EAZ14381.1| hypothetical protein OsJ_04301 [Oryza sativa Japonica Group]
Length = 698
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 95/220 (43%), Gaps = 25/220 (11%)
Query: 402 PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL---VNMKIGIPW 458
PF VD + H FLTH H DH + G+ ++ RL + ++
Sbjct: 10 PFAVDTWGPSSRRRRHRFLTHAHRDHLVAAGGAADSGECPGAVYATRLTLDLALRHFPRL 69
Query: 459 DRLQVLPLNQKTTI------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE 512
+R + + + T+ VT +ANHCPG+++ LFE Q G ++LHTGD R + +
Sbjct: 70 ERGEFVEMEVGKTVVVDDPAGAFSVTAYDANHCPGAVMFLFEGQFG-SILHTGDCRLTPD 128
Query: 513 ---------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
+A C + + LD T+ P +E+ IQ VI I P
Sbjct: 129 CVHNLPLKYIAKKGKENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIWKHPHAP-- 186
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYV----NAAKFRVL 599
+ +G E + +EV+R KIYV N+ FR L
Sbjct: 187 FVYLACDLLGHEEILIEVSRTFGSKIYVDKRRNSDCFRAL 226
>gi|449682246|ref|XP_002170873.2| PREDICTED: uncharacterized protein LOC100203671 [Hydra
magnipapillata]
Length = 417
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 381 KDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHFHMDHYQGLTRSFHH 437
+ + K KD P + + G VDAF Y G+ C ++ L+HFH DHY+GL++ F
Sbjct: 247 RAEMKKNSRKDCPFYKKIFGASISVDAFSY--GEIPGCKYYLLSHFHSDHYKGLSKKFS- 303
Query: 438 GKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANH 484
GK+YCS ITA LV ++ + D + VLP+NQ + + +T L+AN
Sbjct: 304 GKVYCSKITANLVISQLHVFQDNVVVLPMNQLIRLGDVHLTLLDANQ 350
>gi|296206188|ref|XP_002750100.1| PREDICTED: protein artemis [Callithrix jacchus]
Length = 692
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 150/341 (43%), Gaps = 52/341 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPALKRRLECSLKVCLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ LF+ NG VL+T
Sbjct: 76 RFWEKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMFLFQGNNG-TVLYT 134
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E A M +L + I ++ LDTT+ +P + P +E + ++E + +
Sbjct: 135 GDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFFDPRFFQIPSREECLSGILELVGSWI 194
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTN 615
+ +P ++L G E LF ++ +++V+ FR + DI T
Sbjct: 195 TRSPYHVVWLNCKAAYGYEYLFTNLSEEFGIQVHVDKLDMFRNMP-------DILHHLTT 247
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQ 672
+ + IH + + + + + ++ P+ F + +K+
Sbjct: 248 DRSTQIHACRHPNAEEYFQWNKLPCGITSKNRIPLNTISIKPSTMWFGERTRKT------ 301
Query: 673 QGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 302 -NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 341
>gi|167376679|ref|XP_001734097.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165904551|gb|EDR29766.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 202
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 12/158 (7%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
KTLF++ +YTIGKE E+AR KI+V+ K+ ++K K D+ +T E S +
Sbjct: 3 KTLFIVQTYTIGKEMFVEEIARQTGMKIHVDENKYSIVK---LCKRDLSLYTLEE--SSL 57
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEV 681
+ + S L +Q ++ I+ F PTGW KK + ++ + Y++
Sbjct: 58 EIRTSISNISISSLTVELSQLPNKYDKIIIFQPTGW----AKKTTCKGSFE---VKEYKM 110
Query: 682 PYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
PYSEH SF EL + K + +H+IPSV +G+ S +
Sbjct: 111 PYSEHSSFNELIDCYKMIRADHVIPSVIGEGQTSQKII 148
>gi|392868391|gb|EJB11487.1| DNA repair protein [Coccidioides immitis RS]
Length = 775
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL S +YCS T +++ N GI R
Sbjct: 32 FLSHVHSDHLQGL-ESLRSPFVYCSAATRKILLCIEKYPHRMNFAKGILETRKQEYKHLA 90
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL+ T I + I VT ANHCPG+++ L E NGKA+L+TGD R +
Sbjct: 91 KLLRPIPLHVPTEIELTPGSTIRVTLFNANHCPGAVMFLIE-GNGKAILYTGDVRAEPWW 149
Query: 510 SEEMASMSV-----LQTCPIHTLILDTTYC--NPLYD-FPKQEAVIQFVIEAIQAESFNP 561
E + + L C + + LDTT+ + +Y FP + I+ ++ ++A +
Sbjct: 150 VESLIRNPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELLHKVKA--YPE 207
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F ++T G E +++ ++ L KI+V+ + ++ + L
Sbjct: 208 DTIFYFRNWTFGYEDVWIALSAALNTKIHVDQYQLKLYQSL 248
>gi|303322829|ref|XP_003071406.1| hypothetical protein CPC735_069430 [Coccidioides posadasii C735
delta SOWgp]
gi|240111108|gb|EER29261.1| hypothetical protein CPC735_069430 [Coccidioides posadasii C735
delta SOWgp]
Length = 769
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 108/221 (48%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL S +YCS T +++ N GI R
Sbjct: 26 FLSHVHSDHLQGL-ESLRSPFVYCSAATRKILLRIEKYPHRMNFAKGILETRKQEYKHLA 84
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL+ T I + I VT ANHCPG+++ L E NGKA+L+TGD R +
Sbjct: 85 KLLRPIPLHVPTEIELTPGSTIRVTLFNANHCPGAVMFLIE-GNGKAILYTGDVRAEPWW 143
Query: 510 SEEMASMSV-----LQTCPIHTLILDTTYC--NPLYD-FPKQEAVIQFVIEAIQAESFNP 561
E + + L C + + LDTT+ + +Y FP + I+ ++ ++A +
Sbjct: 144 VESLIRNPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELLHKVKA--YPE 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F ++T G E +++ ++ L KI+V+ + ++ + L
Sbjct: 202 DTIFYFRNWTFGYEDVWIALSAALNTKIHVDQYQLKLYQSL 242
>gi|449459252|ref|XP_004147360.1| PREDICTED: uncharacterized protein LOC101217143 [Cucumis sativus]
Length = 624
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 21/239 (8%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH G+ F IY + +T +V + D
Sbjct: 8 GLPFSVDTWSPSSKKKRHHFLTHAHRDHTTGIVPHFSF-PIYSTFLTKSIVLQQFPQLHD 66
Query: 460 RLQV-LPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE-- 512
L V + + Q + D VT +A+HCPG+++ LFE G VLHTGD R + E
Sbjct: 67 SLFVCIEVGQSLVVKDPDGAFTVTVFDAHHCPGAVMFLFEGYFGN-VLHTGDCRLTPECL 125
Query: 513 -------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
C + + LD T+ FP + + I +I I P ++
Sbjct: 126 QNLPEKYRGKSGKEPRCKLDLIFLDCTFGRFFQQFPSRHSSIHQIINCIWKHPDAP-LVY 184
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM 624
LI + +G+E + +V++ KI+ + +K K L+ DI T + S H++
Sbjct: 185 LICNL-LGQEDILQQVSQTFGSKIFADESKKAGYKALELINPDI---LTQDPSSRFHLL 239
>gi|402218720|gb|EJT98796.1| hypothetical protein DACRYDRAFT_35001, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 216
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 104/218 (47%), Gaps = 38/218 (17%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCS---------LITAR-LVNMKIGIP------WDRL 461
+ L+H H+DH +GL S GK+ CS + TA+ V+ G+ W RL
Sbjct: 4 YLLSHTHVDHIRGLDASTFCGKVICSPDAKEMILRMETAKDRVDYDRGVREQKIRRWARL 63
Query: 462 Q-VLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ + LN T + +T L+ANHCPGS++ L E G AVLHTGD R E
Sbjct: 64 KTAVSLNSPTKFEILADETVLITLLDANHCPGSVMFLVEGSRG-AVLHTGDVR--SEPVM 120
Query: 516 MSVLQTCPIHT-----------LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
++ L+ P+ T + LDT+ D P +E + I+ I + PKT
Sbjct: 121 VNALRRNPLLTQYISPFKVLDAIHLDTSCFLGTVDVPPKEDAVAGFIKLIML--YPPKTT 178
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
F I ++T G E + VAR+L K++V+ K + L
Sbjct: 179 FFINAWTWGYESMITAVARLLNAKVHVDRYKHTIFTHL 216
>gi|325093010|gb|EGC46320.1| DNA repair protein [Ajellomyces capsulatus H88]
Length = 705
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDR-------- 460
FL+H H DH QGL S IYCS T + +N GI R
Sbjct: 36 FLSHVHSDHLQGL-ESLRAPFIYCSAATREILLRLEKYPHRINFSKGILESRKQHYKHLS 94
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL T I I VT +ANHCPG+++ L E NGKA+L+TGD R +
Sbjct: 95 KLLRPIPLQVPTEIELSPRNNIRVTLFDANHCPGAVMFLIE-GNGKAILYTGDIRAESWW 153
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLY--------DFPKQEAVIQFVIEAIQAESFNP 561
+ + VL + + +LD Y + + F + I+ ++E +Q ++
Sbjct: 154 VDNLIRNPVLIPYTLGSKLLDKIYLDTTFATKSDVYQTFASKAEGIRELLEKVQ--TYPD 211
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
TLF + +T G E ++L ++ L +I+V+ + V + L
Sbjct: 212 NTLFYLRVWTFGYEDVWLALSAALNTRIHVDRYQMGVYQSL 252
>gi|367040249|ref|XP_003650505.1| hypothetical protein THITE_48711 [Thielavia terrestris NRRL 8126]
gi|346997766|gb|AEO64169.1| hypothetical protein THITE_48711 [Thielavia terrestris NRRL 8126]
Length = 630
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 108/207 (52%), Gaps = 31/207 (14%)
Query: 419 FLTHFHMDHYQGLTR------------SFHHGKIYCSLITAR-LVNMKIGIPWDRLQVLP 465
FL+H H DH GL ++ +G + + R L N+ IP D +L
Sbjct: 32 FLSHIHSDHLAGLESLRSPLLRYPCRINYANGILEARIQRYRHLRNLLKPIPLDTPTLLE 91
Query: 466 LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMA-SMSVLQ 520
L I VT L+ANHCPG+++ LFE NGKAVL+TGD R F +A S S+++
Sbjct: 92 LEPGNHI---QVTLLDANHCPGAVMFLFE-GNGKAVLYTGDVRSEPWFVNSLARSPSLIE 147
Query: 521 TCP----IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK-TLFLIGSYTIGKE 575
+ T+ LDT++ + + +FP + + ++E +Q S P T+F ++T G E
Sbjct: 148 YSSGLKTLDTIYLDTSFLDNI-EFPTKA---EGIVELLQKVSRYPADTIFHFQAWTYGYE 203
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCL 602
+++ +++ L+ KI+V+ K + + L
Sbjct: 204 DVWIALSKFLQSKIHVDEYKMSMFRSL 230
>gi|212540178|ref|XP_002150244.1| DNA repair protein, putative [Talaromyces marneffei ATCC 18224]
gi|210067543|gb|EEA21635.1| DNA repair protein, putative [Talaromyces marneffei ATCC 18224]
Length = 641
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 43/222 (19%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS +T L+ N GI R
Sbjct: 26 FLSHVHSDHLQGL-ESFRSPFIYCSAVTRELLLRLEKFPHRMNFSKGILEARKQHYGHLA 84
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PLN T I + VT L+ANHC G++++L E Q GKA+L+TGD R +E
Sbjct: 85 KILRPIPLNTPTEIELTPLQRVRVTLLDANHCAGAVMLLIEGQ-GKAILYTGDIR-AESW 142
Query: 514 ASMSVLQ-------TCPIHTL---ILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFN 560
S+++ C + TL LDTT+ N FP + I+ ++E + +
Sbjct: 143 WVNSLIRHPALVPYACGLKTLDNIYLDTTFAVKSNIYRHFPSKAEGIKELLEKVG--RYP 200
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+ + ++T G E ++ ++ L K++V+ ++ + L
Sbjct: 201 KDTVLYLRAWTFGYEEVWQALSAFLESKVHVDRYQYGLYMSL 242
>gi|317026030|ref|XP_001388784.2| DNA repair protein [Aspergillus niger CBS 513.88]
Length = 798
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T ++ N GI R
Sbjct: 32 FLSHVHSDHLQGL-ESFRTPFIYCSAATREMLLRIEKYPHRMNFSKGILESRKLHYKHLS 90
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PLN T + I T +ANHC G+++ L E NGKA+L+TGD R +E
Sbjct: 91 KLLRPIPLNTPTELDLTPRLSIRATLFDANHCTGAVMFLIE-GNGKAILYTGDIR-AEPW 148
Query: 514 ASMSVLQTC----------PIHTLILDTTYCNP---LYDFPKQEAVIQFVIEAIQAESFN 560
S+++ + + +D T+ P + FP + ++ ++ IQA +
Sbjct: 149 WVNSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELLNKIQA--YP 206
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+T F + ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 207 DRTTFYLRAWTFGYEEVWMALSAALNSKIHVDRYQMDLYRSL 248
>gi|406859025|gb|EKD12098.1| artemis protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 957
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 45/245 (18%)
Query: 403 FRVDAFKYLRGDC--SHWFLTHFHMDHYQGL-TRSFHHGKIYCSLITARLVNMKIGIPWD 459
RVD F+ G FL+H H DH GL ++ + IYCS T R + +++ D
Sbjct: 14 IRVDYFRPAAGLAPPRACFLSHVHSDHLAGLDSKHWKTSFIYCSPAT-REILLRLERRVD 72
Query: 460 R---------------------LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILF 493
R L+ +PL T I + VT +ANHC G+++ LF
Sbjct: 73 RVGFEMKTLAARKVQYGHLEKLLKPIPLGTPTQIELKPGVTLQVTLFDANHCAGAVMFLF 132
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQ-------TCPIHTL---ILDTTYCNPLYDFPKQ 543
E N AVL+TGD R SE S+ + T I TL LDT+ + PK
Sbjct: 133 EMDN-LAVLYTGDIR-SEPWHVSSLARNPLLLEYTSGIKTLDCIYLDTSRTDQSIFPPKA 190
Query: 544 EAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLD 603
+ + + + + +Q + T+F + ++T G E +++ +++ L+ +I+VN +R+ + L
Sbjct: 191 DGLRELLQKVLQ---YPADTIFHLSAWTYGYEEVWMALSKALKSQIHVNKYTYRIFESLR 247
Query: 604 FSKED 608
+KED
Sbjct: 248 GAKED 252
>gi|148675981|gb|EDL07928.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_a [Mus musculus]
Length = 699
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 151/340 (44%), Gaps = 56/340 (16%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK--------IYCSLITARLV--NMKI 454
+D F +FL+H H DH +GL + +YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGS------GSNG-TVLYT 128
Query: 505 GDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQA-E 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 129 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 188
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNE 616
+ +P ++L G E LF ++ L +++V+ K + K + DI T +
Sbjct: 189 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM----PDILHHLTTD 242
Query: 617 HESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
+ IH W K +++Q I T W + +K +
Sbjct: 243 RNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTNVI 298
Query: 669 RRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 299 VRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 335
>gi|413918212|gb|AFW58144.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 233
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTR 433
R+ +++ +K P + +PGTPF VDAF+Y + + CS +FL+HFH DHY GLT+
Sbjct: 148 RRGSTEEERVAAKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHFHHDHYGGLTK 207
Query: 434 SFHHGKIYCSLITARLVNMKIGI 456
+ HG IYCS +TARLV M + +
Sbjct: 208 KWCHGPIYCSALTARLVKMCLSV 230
>gi|302403927|ref|XP_002999802.1| artemis protein [Verticillium albo-atrum VaMs.102]
gi|261361558|gb|EEY23986.1| artemis protein [Verticillium albo-atrum VaMs.102]
Length = 657
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 41/225 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDRLQV----- 463
FL+H H DH GL S +YCS T + +N GI R+Q
Sbjct: 32 FLSHVHSDHLAGL-ESLRSPFVYCSAATREILLRLERYPCRINFAKGILEARVQTFKGLK 90
Query: 464 -----LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+PL+ T I I VT ++ANHCPG+++ L E +G+AVL+TGD R SE
Sbjct: 91 GLLKPIPLDTPTEIELAPGLCIQVTLIDANHCPGAVMFLIE-GDGRAVLYTGDIR-SEPW 148
Query: 514 ASMSVLQ----------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
SV + + + + LDT++ + ++ K E + + + + + P T
Sbjct: 149 HVNSVARNPALIEYTHGSKTLDKIYLDTSFIDDVHFQTKAEGIAELL---GKVSRYPPDT 205
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
+F ++T G E +++ +++ L+ +++V+ K ++ L E+
Sbjct: 206 IFHFQAWTYGYEEVWIALSKALKSRVHVDDYKMKIFSSLQAKPEN 250
>gi|413918213|gb|AFW58145.1| hypothetical protein ZEAMMB73_659537 [Zea mays]
Length = 256
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
Query: 375 RKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDAFKYLRGD-CSHWFLTHFHMDHYQGLTR 433
R+ +++ +K P + +PGTPF VDAF+Y + + CS +FL+HFH DHY GLT+
Sbjct: 148 RRGSTEEERVAAKKPLACPFYKKIPGTPFTVDAFRYGQVEGCSAYFLSHFHHDHYGGLTK 207
Query: 434 SFHHGKIYCSLITARLVNMKIGI 456
+ HG IYCS +TARLV M + +
Sbjct: 208 KWCHGPIYCSALTARLVKMCLSV 230
>gi|346970779|gb|EGY14231.1| artemis protein [Verticillium dahliae VdLs.17]
Length = 657
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 41/225 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDRLQV----- 463
FL+H H DH GL S +YCS T + +N GI R+Q
Sbjct: 32 FLSHVHSDHLAGL-ESLRSPFVYCSAATREILLRLERYPCRINFAKGILEARVQTFKGLK 90
Query: 464 -----LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+PL+ T I I VT ++ANHCPG+++ L E +G+A+L+TGD R SE
Sbjct: 91 GLLKPIPLDTPTEIELAPGHCIQVTLIDANHCPGAVMFLIE-GDGRAILYTGDIR-SEPW 148
Query: 514 ASMSVLQ-------TCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
SV + T I TL LDT++ + + K E + + + + + P T
Sbjct: 149 HVNSVARNPALIEYTHGIKTLDKIYLDTSFIDDVPFQTKAEGIAELL---GKVSRYPPDT 205
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED 608
+F + ++T G E +++ +++ L+ +++V+ K R+ L E+
Sbjct: 206 IFHLQAWTYGYEDVWIALSKALKSRVHVDDYKMRIFSSLQAKPEN 250
>gi|302689741|ref|XP_003034550.1| hypothetical protein SCHCODRAFT_256591 [Schizophyllum commune H4-8]
gi|300108245|gb|EFI99647.1| hypothetical protein SCHCODRAFT_256591 [Schizophyllum commune H4-8]
Length = 834
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 134/335 (40%), Gaps = 67/335 (20%)
Query: 423 FHMDHYQGLTRSFHHGK---IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA-----G 474
MD TR+F H K I C T + D L+ +PLN T
Sbjct: 14 LAMDIRAEKTRAFAHLKVDPIQCPDGTMYYTGSR-----DLLRAIPLNTATKFELSADEE 68
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS------------------------ 510
+ VT ++ANHCPG+++ L E G A+LHTGDFR
Sbjct: 69 VTVTLIDANHCPGAVMYLIEGNKG-AILHTGDFRAEPWFLDGLTRHPSLQPYIHNGYLNK 127
Query: 511 ---EEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
E++A +VL+T + + LDT + P + +IE ++ + P T F I
Sbjct: 128 LSPEDLALSTVLKT--LDAIYLDTATVTSQLNVPSKARATSGLIELMKL--YPPSTHFFI 183
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
S+T G E + +A+ I+++ K+ + KCL S + T++ + H
Sbjct: 184 NSWTWGYEDILKAIAQAFDTPIHLDRYKYSIFKCLSDSFLR-RIVTSDPAATRFHA---- 238
Query: 628 TLASFKRLKHMS------------NQYAGRFSLI--VAFSPTGWTFSKGKKKSPGRRWQQ 673
F R H++ ++ R + V+ W + K+ + +
Sbjct: 239 -CERFDRCDHVAVDDEVGKPRKVISRLGKRVVYVNPVSMDEEKWDDYLTEHKALLEKGEA 297
Query: 674 GTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+++ VP S H EL+ FVK P ++P+
Sbjct: 298 PSVL--LVPLSRHSPLPELRAFVKLFRPRRVVPNT 330
>gi|398012340|ref|XP_003859364.1| hypothetical protein, conserved [Leishmania donovani]
gi|322497578|emb|CBZ32652.1| hypothetical protein, conserved [Leishmania donovani]
Length = 772
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-------WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
V P +D F L G SH +FLTHFH DH +GL+ ++ G I S +T +L+
Sbjct: 3 VSSLPIIIDEFPALAGRRSHSGSGPELFFLTHFHTDHMKGLSSTWTAGFIITSTLTRQLL 62
Query: 451 NMK--------IGIP-WDRLQVLPL----------NQKTTIAGIDVTCLEANHCPGSIII 491
K +G+P W R VL + T + + VT L A H PGS +I
Sbjct: 63 LNKFEGLRGRVLGLPFWCRTSVLSAAAAAHSETDSSTTTAVPVVYVTLLPAFHVPGSAMI 122
Query: 492 LFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
E +G LHTGDF+++E A MS L+T
Sbjct: 123 YIETPSGVTYLHTGDFKYTETAAQMSPLRT 152
>gi|340514414|gb|EGR44677.1| predicted protein [Trichoderma reesei QM6a]
Length = 453
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 35/213 (16%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV----------LPLNQ 468
FL+H H DH GL + L R VN +GI R Q LPL
Sbjct: 24 FLSHVHSDHLSGLE------TLRSPLYPCR-VNYALGILEARQQTYKHLSKVIKPLPLES 76
Query: 469 KTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVL 519
T I I VT +ANHCPGS++ L E Q GKA+L+TGD R F + L
Sbjct: 77 PTVIELQPGKYIQVTLFDANHCPGSVMFLIEGQ-GKAILYTGDIRSEPWFVNAITRSPAL 135
Query: 520 --QTCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
TC I TL LDT++ + + K E + + + + + + T+F + S+T G
Sbjct: 136 IEYTCGIKTLDTIYLDTSFTDDIPFQTKAEGIAELL---RKVQKYPKDTVFYLQSWTYGY 192
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
E +++ +++ L I+V+ K R+ L+ E
Sbjct: 193 EDVWVALSKALNSPIHVDNYKLRIYNSLNTPSE 225
>gi|390603656|gb|EIN13048.1| hypothetical protein PUNSTDRAFT_141568 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 899
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 151/395 (38%), Gaps = 97/395 (24%)
Query: 399 PGTPF---------RVDAFK---YLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS--- 443
PGTP+ RVDAF + + LTH H DH GL+ I CS
Sbjct: 3 PGTPYNSFVLPYSIRVDAFASNATIETVPALHLLTHTHSDHITGLSAKSFAATIICSPDA 62
Query: 444 --------------LITARLVNMKI---------------GIPW-----DRLQVLPLNQK 469
L + KI G + D L+ +PL+
Sbjct: 63 KEMLLRYEVYAERNLYETEMRAEKIRAFAHLKVEPRKHLDGTTFHHGSRDLLRAIPLHTP 122
Query: 470 TTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ 520
T I + +T ++ANHCPG+++ L E G AVLHTGDFR F E + L
Sbjct: 123 TAIELYNSESVVITLIDANHCPGAVMFLVEGSKG-AVLHTGDFRAEPYFLEGLKRNPFLL 181
Query: 521 --------TCP---------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
T P + + LDT + P ++ ++E +Q F P+T
Sbjct: 182 RYIVPQSITTPDGHGGVRKTLDAVYLDTACLFSNLNVPPKDVATFGLVELVQL--FPPET 239
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLD--FSKEDIQWFTTNEHESHI 621
LF + ++T G E + +A KI+V+ K V + F + I T + +
Sbjct: 240 LFFLNTWTWGYEDILKGIAHAFDSKIHVDRYKHSVFSHISDPFMRAII---TRDAKSTRF 296
Query: 622 HVMPMWTLASFKRLKHMSNQYA----GRFSLI--VAFSPTGW-TFSKGKKKSPGRRWQQG 674
H + A + M Q A GR I V W T+ + KK + + G
Sbjct: 297 HACERF--AQCSPIDDMFAQEARENNGRIVYINPVTMGSESWNTYRQTVKK----QLRNG 350
Query: 675 TIIR-YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
++ VP S H ELK+FV P ++P+
Sbjct: 351 KVVNILLVPLSRHSPLPELKQFVSMFRPRQVVPNT 385
>gi|255577704|ref|XP_002529728.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
gi|223530792|gb|EEF32657.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis]
Length = 543
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 134/329 (40%), Gaps = 30/329 (9%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH G+ + IY + +T L+ + D
Sbjct: 8 GLPFSVDTWSPTSKRKRHHFLTHAHKDHCSGILAHSSY-PIYATHLTKSLLLLYFPQLED 66
Query: 460 RLQV-LPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE-- 512
L V + + Q I VT +ANHCPG+++ LFE G +LHTGD R S E
Sbjct: 67 SLFVGIEVGQSLVIDDPYGNFSVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLSPECI 125
Query: 513 -------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
++ C + + LD T+ P + + Q VI I +
Sbjct: 126 QCLPKKYISKNGKEPRCQLDYVFLDCTFGRFHQKLPSKHSASQQVINCIWKHP--AAAIV 183
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ +G+E L V+R KIYV A +C + T + S HV
Sbjct: 184 YLTCDLLGQEELLANVSRTFGSKIYVEKAANP--ECFHALTLTVPQILTQDPSSRFHVFN 241
Query: 626 MWTLASFKRLKHMSNQYAGRFS---LIVAFSPTGWTFSKGKKKSPGRR-WQQGTIIR--- 678
+ + ++R + F LI+ S + + + + RR + +R
Sbjct: 242 GFPML-YERAAAKVAEAQASFQPEPLIIRPSAQWYACEEEESGTESRRKLRLSEAVRDQF 300
Query: 679 --YEVPYSEHCSFTELKEFVKFVSPEHII 705
+ V YS H S EL+ F++ ++P+ ++
Sbjct: 301 GIWHVCYSMHSSREELEWFLQLLAPKWVV 329
>gi|322801376|gb|EFZ22037.1| hypothetical protein SINV_01264 [Solenopsis invicta]
Length = 715
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 102/231 (44%), Gaps = 51/231 (22%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF------HHGKIYCSLITARLVN 451
+PG VD F S +FL+H H DH QGL+++F ++ +YCS I+ ++
Sbjct: 16 IPG--ISVDRFDGKNKYSSAYFLSHCHTDHMQGLSQTFFEDLKQYNKFLYCSRISKVFLD 73
Query: 452 MKI--------GIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLH 503
+ I D ++ + VTC+ A HCPGS++ LFE + K +L+
Sbjct: 74 ARYYGIETCVKDIDIDERVLIEYKNNGYNTNLFVTCISAGHCPGSVMFLFEKMD-KLILY 132
Query: 504 TGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVI---------QFVIEAI 554
TGDFR + + I+ YCN FPK+ A + F++
Sbjct: 133 TGDFRINPRD-----------YKKIVSLHYCNDFNTFPKKFAKMYLDTTFLDYNFIVFPT 181
Query: 555 QAESFN-------------PKTLFLIG-SYTIGKERLFLEVARVLRKKIYV 591
+ ES N P+ + ++ S G E L++E+++ L I+V
Sbjct: 182 RKESINKMGHVVKEWLEESPRNVVVLECSALYGSEFLYMELSKALNLSIHV 232
>gi|327350308|gb|EGE79165.1| DNA repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 764
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDR-------- 460
FL+H H DH QGL S IYCS T + +N GI R
Sbjct: 26 FLSHVHSDHLQGL-ESLRAPFIYCSAATREILLRLEKYPHRINFSKGILESRKKHYKHLS 84
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL T I + VT +ANHCPG+++ L E N KA+L+TGD R +
Sbjct: 85 KLLRPIPLQVPTEIELSPRNNVRVTLFDANHCPGAVMFLIE-GNRKAILYTGDIRAESWW 143
Query: 510 SEEMASMSVLQTCPIHT-----LILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFNP 561
+ + VL + + + LDTT+ N FP + I+ ++E IQ ++
Sbjct: 144 VDNLIRHPVLIPYTLGSKRLDKIYLDTTFATKSNVYQSFPSKAEGIRELLEKIQ--TYPD 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
TLF + +T G E ++L ++ L +I+V+ + V + L
Sbjct: 202 STLFYLRVWTFGYEDVWLALSAALNTRIHVDEYQMGVYRSL 242
>gi|389641683|ref|XP_003718474.1| hypothetical protein MGG_00571 [Magnaporthe oryzae 70-15]
gi|351641027|gb|EHA48890.1| hypothetical protein MGG_00571 [Magnaporthe oryzae 70-15]
Length = 725
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 41/219 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDRLQV----- 463
FL+H H DH GL S +YCS T L +N GI R+Q
Sbjct: 31 FLSHVHSDHLAGL-ESLRSPFVYCSAATRELLLRLERYPCRINYAKGILEARVQTYKHLK 89
Query: 464 -----LPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+PL+ T I I VT L+ANHC G+++ LFE +GKAVL+TGD R SE
Sbjct: 90 NLLKPIPLDTPTQIELAPGKSIGVTLLDANHCTGAVMFLFE-GDGKAVLYTGDIR-SEPW 147
Query: 514 ASMSVLQ-------TCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
S+ + + I TL LDT+ + FP ++A ++ ++E ++ S+ T
Sbjct: 148 HVNSIARNPCMMEYSAGIKTLSRIYLDTSNTEDIA-FPSKDAGLKELLEKLK--SYPKDT 204
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F ++T G E +++ +++ L I+V+ K ++ + L
Sbjct: 205 IFHFKAWTFGYEDVWIALSKALDSPIHVDDYKMQLYRSL 243
>gi|384246171|gb|EIE19662.1| hypothetical protein COCSUDRAFT_19473 [Coccomyxa subellipsoidea
C-169]
Length = 168
Score = 80.5 bits (197), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 12/129 (9%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK--------IGIPWDRLQVLPLNQKT 470
FLTH H DH QGL+ ++ +YCS T L+ ++ I + D +L
Sbjct: 31 FLTHAHADHLQGLSDTWTGAPLYCSSATRELLLVRWPDFRAPLISLELDETVILRAATPY 90
Query: 471 TIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS---VLQTCPIHTL 527
A + VT L ANHC G+++ LFE G+ VLH GDFR+ +E + +L + P+ L
Sbjct: 91 GHATVQVTPLNANHCLGAVMFLFEGPFGR-VLHCGDFRWEQEYQKENLHPILTSAPLDVL 149
Query: 528 ILDTTYCNP 536
LD TY +P
Sbjct: 150 YLDNTYAHP 158
>gi|225680684|gb|EEH18968.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 722
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDR-------- 460
FL+H H DH QGL S IYCS T + +N GI R
Sbjct: 26 FLSHVHSDHLQGL-ESLRAPFIYCSAATREILLRLEKRPHRINFSKGILESRRQHYKHLS 84
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PL T I + VT +ANHCPG+++ L E NGK +L+TGD R
Sbjct: 85 KLLRPIPLQVPTEIELSPRNHVRVTLFDANHCPGAVMFLIE-GNGKTILYTGDIRAESWW 143
Query: 514 ASMSV---------LQTCPIHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFNP 561
+ L + + LDTT+ + FP + I+ ++E I A +
Sbjct: 144 VGNLIRNPVLIPYTLGDKRLDKIYLDTTFATKSDVYQSFPSKAEGIRELLEKINA--YPE 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F + +T G E ++L ++ L KI+V+ + + K L
Sbjct: 202 DTIFYLRVWTFGYEDIWLALSSALNTKIHVDQYQIELYKSL 242
>gi|406604220|emb|CCH44306.1| Endoribonuclease ysh1 [Wickerhamomyces ciferrii]
Length = 704
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 21/210 (10%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARL--VNMKIGIPWDRLQVLPLNQKTTI--- 472
+ LTH H DH +GL SF +YCS IT L +N K W L+ L NQ+ T+
Sbjct: 16 YLLTHAHADHLKGLDSSFSGHPVYCSEITKELLKLNPKYSRSWPSLRPLKENQRHTVPLK 75
Query: 473 --AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE-MASMSVLQTCPIHT--- 526
I++T + A HCPG+++ L E N K++L TGD R + + S+ + +T
Sbjct: 76 DGVSINLTLIPARHCPGAVMFLVE-SNEKSILITGDIRAERDWVGSLPRNEFLFPYTTSL 134
Query: 527 -----LILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFNPKTL-FLIGSYTIGKERL 577
+ LDTT+ P D +Q + E ++ + T F TIG E
Sbjct: 135 KKFDNIYLDTTFGYRQEPFIDMKSNYFGLQALCEVMKFYPMDDDTFSFHFADSTIGYEEA 194
Query: 578 FLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
++ + + K++ N ++ L+ L S E
Sbjct: 195 WIRIISLFGGKMHSNNDLYKRLELLSNSNE 224
>gi|225431465|ref|XP_002274308.1| PREDICTED: 5' exonuclease Apollo-like [Vitis vinifera]
Length = 552
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH G++ + IY + +T L+ + D
Sbjct: 8 GLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAY-PIYSTHLTKTLILQQYPQLDD 66
Query: 460 RLQV-LPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE-- 512
L V + + Q + D VT +ANHCPG+++ LFE G +LHTGD R E
Sbjct: 67 SLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGN-ILHTGDCRLIPECL 125
Query: 513 -------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
+ C + LD T+ P + IQ VI I P +
Sbjct: 126 QNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAP--IV 183
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ S +G+E + + V+R+ KI+V+ A
Sbjct: 184 YLCSDMLGQEEILINVSRIFGSKIFVDKA 212
>gi|321264051|ref|XP_003196743.1| hypothetical protein CGB_K3070W [Cryptococcus gattii WM276]
gi|317463220|gb|ADV24956.1| Hypothetical Protein CGB_K3070W [Cryptococcus gattii WM276]
Length = 758
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 138/370 (37%), Gaps = 90/370 (24%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV--------------------------- 450
+ LTH H DH GLT F G I CS T R++
Sbjct: 55 FLLTHTHADHVVGLTSDFT-GYIICSPDTKRMLLDLEPERERQWLDKGIRETKVKRFGGL 113
Query: 451 NMKIGIPW---DRLQVLPLNQ-KTTIAG--------IDVTCLEANHCPGSIIILFEPQNG 498
K GI DR++ LP Q K G + +T L+ANHCPGS + L
Sbjct: 114 AAKRGIDGKIVDRIEALPYGQPKVFTLGYENDKPQEVTITLLDANHCPGSTMFLIT-SGK 172
Query: 499 KAVLHTGDFR----FSEEMASMSVLQT--CPIHT-----------------LILDTTYCN 535
KAVLHTGD R F + + +LQ PI + LDT
Sbjct: 173 KAVLHTGDVRADTKFIDSLKRNPILQEFLAPISMYRKAKSLVGGGRRVLDRIYLDTAAML 232
Query: 536 PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK 595
D P +E ++Q ++E + + T F + ++ G E + EVAR +K++V+ K
Sbjct: 233 GTGDMPDKEPILQELVEIMGL--YPEDTTFFLNTWCFGSEDVIKEVARYFNEKVHVDRYK 290
Query: 596 FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT-LASFKRLKHMSNQYAGRFSL------ 648
++ + + TT+ E+ H + + +R S++
Sbjct: 291 SQIYSAIRSDPFLLNCTTTDPLETRFHACERFAKCVACRRFDDESSKPIYNLDKMIVHVN 350
Query: 649 IVAFSPTGW----------TFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
+V GW F +K P W ++P S H + EL+ VK
Sbjct: 351 MVEVKQVGWDSRRQGFMETLFKAARKGGP---WP----FNIDIPISRHSTLPELQSLVKL 403
Query: 699 VSPEHIIPSV 708
P + P+
Sbjct: 404 FKPLALTPNT 413
>gi|326482813|gb|EGE06823.1| DNA repair protein [Trichophyton equinum CBS 127.97]
Length = 763
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH GL S +YCS T ++ N GI R
Sbjct: 26 FLSHVHSDHLVGL-ESLRAPFVYCSAATREILLRIEKYPHRMNFAKGILESRKQHYKHLA 84
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL T I I VT +ANHCPGS++ L E +GKA+L+TGD R +
Sbjct: 85 KLLRPIPLRVPTEIELMPGNTIRVTLFDANHCPGSVMFLIE-GDGKAILYTGDIRAESWW 143
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYD--------FPKQEAVIQFVIEAIQAESFNP 561
+ + VL + LDT Y + + FP + I+ ++ I+ +
Sbjct: 144 VQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDIHQVFPSKAEGIRELLSKIKG--YPE 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F + S+T G E ++L ++ L KI+V+ ++R+ L
Sbjct: 202 DTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQYRLYNSL 242
>gi|405119287|gb|AFR94060.1| hypothetical protein CNAG_07550 [Cryptococcus neoformans var.
grubii H99]
Length = 674
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 129/331 (38%), Gaps = 64/331 (19%)
Query: 429 QGLTRSFHHGKI--YCSLITARLVNMKIGIPWDRLQVLPLNQ-KTTIAG--------IDV 477
Q L + KI + L R ++ K+ DR++ LP Q K G I +
Sbjct: 12 QWLDKGIRETKIKRFGGLAAKRGIDGKL---VDRIEALPYGQPKVFTLGYENAKPQEITI 68
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFR--------------FSEEMASMSVLQTCP 523
T L+ANHCPGS + L + K VLHTGD R E +A SV Q
Sbjct: 69 TLLDANHCPGSTMFLIT-SDKKTVLHTGDVRADTRFIDSLKRNPILQEFLAPASVYQKAK 127
Query: 524 ---------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
+ + LDT D P +E ++Q ++E + + T F + ++ G
Sbjct: 128 SLVGGGRRVLDRIYLDTAAMLGTGDMPDKEPILQELVEIMGL--YPEDTTFFLNTWCFGW 185
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT-LASFK 633
E + EVAR +K++V+ K ++ + + TT+ HE+ H + + +
Sbjct: 186 EDVIKEVARYFNEKVHVDRYKSQIYSAIRSDPFLLNCTTTDPHETRFHACERFAKCIACR 245
Query: 634 RLKHMSNQYAGRFSL------IVAFSPTGW----------TFSKGKKKSPGRRWQQGTII 677
R + S + A +V GW F KK P W
Sbjct: 246 RFEDESGKPAYNLDKMIVHVNMVEVKQVGWDSRRQEFMEALFKAAKKGGP---WP----F 298
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
++P S H S EL+ VK P + P+
Sbjct: 299 NIDIPISRHSSLPELQSLVKLFKPLGLTPNT 329
>gi|326474617|gb|EGD98626.1| hypothetical protein TESG_06106 [Trichophyton tonsurans CBS 112818]
Length = 763
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH GL S +YCS T ++ N GI R
Sbjct: 26 FLSHVHSDHLVGL-ESLRAPFVYCSAATREILLRIEKYPHRMNFAKGILESRKQHYKHLA 84
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL T I I VT +ANHCPGS++ L E +GKA+L+TGD R +
Sbjct: 85 KLLRPIPLRVPTEIELMPGNTIRVTLFDANHCPGSVMFLIE-GDGKAILYTGDIRAESWW 143
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYD--------FPKQEAVIQFVIEAIQAESFNP 561
+ + VL + LDT Y + + FP + I+ ++ I+ +
Sbjct: 144 VQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDIHQVFPSKAEGIRELLSKIKG--YPE 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F + S+T G E ++L ++ L KI+V+ ++R+ L
Sbjct: 202 DTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQYRLYNSL 242
>gi|296818323|ref|XP_002849498.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238839951|gb|EEQ29613.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 722
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 96/197 (48%), Gaps = 32/197 (16%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
FL+H H DH GL S IYCS T R V +I +++P N I VT
Sbjct: 26 FLSHVHSDHLAGL-ESLRAPFIYCSTAT-REVPTEI-------ELMPGNT------IKVT 70
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT----------CPIHTLI 528
+ANHCPGS++ L E GKA+L+TGD R +EE S+++ + +
Sbjct: 71 LFDANHCPGSVMFLIE-GAGKAILYTGDIR-AEEWWVQSLVRNPVLIPYTMGDSRLDNIY 128
Query: 529 LDTTYCNPL---YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 585
LDTT+ FP + IQ ++ ++ + TLF + S+T G E ++L ++ L
Sbjct: 129 LDTTFATKSDIHQVFPSKAEGIQELLSKVK--EYPSDTLFYLRSWTFGYEDVWLALSTAL 186
Query: 586 RKKIYVNAAKFRVLKCL 602
KI+V+ + + L
Sbjct: 187 NTKIHVDRYQLGLYNSL 203
>gi|327298459|ref|XP_003233923.1| hypothetical protein TERG_05792 [Trichophyton rubrum CBS 118892]
gi|326464101|gb|EGD89554.1| hypothetical protein TERG_05792 [Trichophyton rubrum CBS 118892]
Length = 771
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 101/221 (45%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH GL S +YCS T ++ N GI R
Sbjct: 26 FLSHVHSDHLVGL-ESLRAPFVYCSAATREILLRIEKYPHRMNFAKGILESRKQHYKHLA 84
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL T I I VT +ANHCPGS++ L E +GKA+L+TGD R +
Sbjct: 85 KLLRPIPLQVPTEIELMPGNTIRVTLFDANHCPGSVMFLIE-GDGKAILYTGDIRAEAWW 143
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYD--------FPKQEAVIQFVIEAIQAESFNP 561
+ + VL + LDT Y + + FP + I+ ++ I+ +
Sbjct: 144 VQSLIRNPVLIPYNMGDRRLDTIYLDTTFATKSDIHQVFPSKAEGIRELLSKIKG--YPE 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F + S+T G E ++L ++ L KI+V+ ++R+ L
Sbjct: 202 DTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQYRLYNSL 242
>gi|168023878|ref|XP_001764464.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684328|gb|EDQ70731.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 603
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 402 PFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL 461
PF VD + + FLTH H DH G+ H IYC+ +T +LV + L
Sbjct: 9 PFSVDTWTEMAMRKPFHFLTHAHKDHTVGIDSHGTH-PIYCTSLTEKLVLRRYPTLHPSL 67
Query: 462 -QVLPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
+ L + + +AG D VT +ANHCPG+I++LFE G +LHTGD R + E +
Sbjct: 68 FKNLEIGEPKLLAGEDQAFTVTAFDANHCPGAIMLLFEGSFG-TLLHTGDCRLTIECLNQ 126
Query: 517 SVLQTC-----PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
Q + + LD T+ N P E I+ V I S + +
Sbjct: 127 LPRQFISGSGRALDCVYLDCTFGNVTMVMPSIEEAIEQVKRCIWNHSSEARV--YLACDM 184
Query: 572 IGKERLFLEVARVLRKKIYVNAAKF-RVLKCLDFSKEDIQWFTTNEHES 619
+G+E L VA +KI++N R L L+ D F T++ ES
Sbjct: 185 LGQETLLEAVANSFGQKIFINKDGLSRYLADLEVVASD---FLTSDSES 230
>gi|146081028|ref|XP_001464168.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068258|emb|CAM66545.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 772
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 26/150 (17%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-------WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV 450
V P +D F L G S+ +FLTHFH DH +GL+ ++ G I S +T +L+
Sbjct: 3 VSSLPIIIDEFPALAGRRSYSGSGPELFFLTHFHTDHMKGLSSTWTAGFIITSTLTRQLL 62
Query: 451 NMK--------IGIP-WDRLQVLPL----------NQKTTIAGIDVTCLEANHCPGSIII 491
K +G+P W R VL + T + + VT L A H PGS +I
Sbjct: 63 LNKFEGLRGRVLGLPFWCRTSVLSAAAAAHSETDSSTTTAVPVVYVTLLPAFHVPGSAMI 122
Query: 492 LFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
E +G LHTGDF+++E A MS L+T
Sbjct: 123 YIETPSGVTYLHTGDFKYTETAAQMSPLRT 152
>gi|401417715|ref|XP_003873350.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322489579|emb|CBZ24837.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 771
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 24/148 (16%)
Query: 398 VPGTPFRVDAFKYLRGDCSH-----WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
VP P +D F L G S +FLTHFH DH +GL+ S+ G I +T +L+
Sbjct: 3 VPSLPILIDEFPALAGRRSGSGTELFFLTHFHTDHMKGLSSSWTTGLIITGTLTRQLLLN 62
Query: 453 K--------IGIP-WDRLQVLPLN---------QKTTIAGI-DVTCLEANHCPGSIIILF 493
K +G+P W R VL + TT+A + VT L A H PGS +I
Sbjct: 63 KFEGLRGRVLGLPFWCRTPVLSASGAAHGGRESAATTVAPVVYVTLLPAFHIPGSAMIYI 122
Query: 494 EPQNGKAVLHTGDFRFSEEMASMSVLQT 521
E +G LHTGDF+++E A +S L+T
Sbjct: 123 ETPSGVTYLHTGDFKYTETAAQVSPLRT 150
>gi|171185767|ref|YP_001794686.1| beta-lactamase domain-containing protein [Pyrobaculum neutrophilum
V24Sta]
gi|170934979|gb|ACB40240.1| beta-lactamase domain protein [Pyrobaculum neutrophilum V24Sta]
Length = 315
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 39/305 (12%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G F VD ++G +TH H DH ++R + + T +++++G
Sbjct: 15 GVRFVVDPVGPIKGRVDFVLITHGHSDH---ISRYALRYPVVATRETLAAMSVRLGAAPA 71
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
R + + + G++V LEA H GS++ L E +G L TGDF + + +
Sbjct: 72 RRITVAAGRVVEVDGVEVAVLEAGHILGSVMYLVE-VDGLQALFTGDFNTVGTILTDAAE 130
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
+ L+++ TY +P Y FP + V +++ ++ S + I +Y +GK +
Sbjct: 131 PVENVDVLVMEATYGDPAYVFPNRAEVYNELLDLVERHSGDGGV--AIAAYPLGKAQ--- 185
Query: 580 EVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS 639
EVAR+L + +AA R + L S T E I W + R++
Sbjct: 186 EVARLLGHRAGAHAAVARYNRALGIS-------TGGGREVVIVPSLRWAPRGYVRVE--- 235
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
+GW + ++ R ++G Y +P S+H F L +F + +
Sbjct: 236 --------------VSGWYAEEEARR---RALREGV---YGIPLSDHSDFPNLVQFAQEI 275
Query: 700 SPEHI 704
SP I
Sbjct: 276 SPRLI 280
>gi|225563060|gb|EEH11339.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 748
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 35/215 (16%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDRLQVLPLNQ 468
FL+H H DH QGL S IYCS T + +N GI R Q
Sbjct: 26 FLSHVHSDHLQGL-ESLRAPFIYCSAATREILLRLEKYPHRINFSKGILESRKQHYKHLS 84
Query: 469 KTTIA---------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMAS 515
K + I VT +ANHCPG+++ L E NGKA+L+TGD R + + +
Sbjct: 85 KLLVPTEIELSPRNNIRVTLFDANHCPGAVMFLIE-GNGKAILYTGDIRAESWWVDNLIR 143
Query: 516 MSVLQTCPIHTLILDTTYCNPLY--------DFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
VL + + +LD Y + + F + I+ ++E +Q ++ TLF +
Sbjct: 144 NPVLIPYTLGSKLLDKIYLDTTFATKSDAYQTFASKAEGIRELLEKVQ--TYPDNTLFYL 201
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+T G E ++L ++ L +I+V+ + V + L
Sbjct: 202 RVWTFGYEDVWLALSAALNTRIHVDRYQMGVYQSL 236
>gi|115390845|ref|XP_001212927.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193851|gb|EAU35551.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 694
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T L+ N GI R
Sbjct: 32 FLSHVHSDHLQGL-ESFRAPFIYCSAATRDLLLRIEKYPHRMNFSKGILESRQLHYKHLS 90
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PLN T I I VT L+ANHC G+++ L E +GKA+L+TGD R +
Sbjct: 91 KLLRPIPLNTPTVIELTPRLSIRVTLLDANHCTGAVMFLIE-GDGKAILYTGDIRAEPWW 149
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLY--------DFPKQEAVIQFVIEAIQAESFNP 561
+ +L + + LD Y + + FP + + +++ + S+
Sbjct: 150 VNSLVRHPILLPYTLGSKRLDKIYLDSTFARASHIYRTFPSKAEGLAELLQKVA--SYPD 207
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 208 DTVFYFRAWTFGYEEVWMALSAFLNSKIHVDRYQMGLYRSL 248
>gi|242210354|ref|XP_002471020.1| predicted protein [Postia placenta Mad-698-R]
gi|220729922|gb|EED83788.1| predicted protein [Postia placenta Mad-698-R]
Length = 206
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 26/176 (14%)
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC-LDFSKEDIQWFTTNEHESHIHVMP 625
+ +Y+IGKER+ +AR L+ K+Y ++ K +L+C D D+ T + E +H++P
Sbjct: 6 LSTYSIGKERIVKAIARALQTKVYCDSRKAAILRCQADPELHDL--LTKDPLEGGVHLVP 63
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK--GKKKSP----------GR---- 669
+ +AS RLK ++ G + V F PTGWTFS G P GR
Sbjct: 64 LGVIAS-DRLKDYVERFKGHYIKAVGFRPTGWTFSAPTGSDMVPSVSTIIARTQGRTFTH 122
Query: 670 ------RWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
R + Y VPYSEH SF EL F + +I +VN S N M
Sbjct: 123 AHLSPMRNSTAALQVYGVPYSEHSSFFELTCFALSLDWGRMIATVNVGSEKSRNKM 178
>gi|296088547|emb|CBI37538.3| unnamed protein product [Vitis vinifera]
Length = 558
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 92/209 (44%), Gaps = 18/209 (8%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH G++ + IY + +T L+ + D
Sbjct: 42 GLPFSVDTWTPSSKKKRHHFLTHAHKDHSSGISTHSAY-PIYSTHLTKTLILQQYPQLDD 100
Query: 460 RLQV-LPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE-- 512
L V + + Q + D VT +ANHCPG+++ LFE G +LHTGD R E
Sbjct: 101 SLFVGIEVGQSMVVDDPDGRFGVTAFDANHCPGAVMFLFEGDFGN-ILHTGDCRLIPECL 159
Query: 513 -------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
+ C + LD T+ P + IQ VI I P +
Sbjct: 160 QNLPQKYVTKKGKEPKCQFDYVFLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAP--IV 217
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ S +G+E + + V+R+ KI+V+ A
Sbjct: 218 YLCSDMLGQEEILINVSRIFGSKIFVDKA 246
>gi|317144266|ref|XP_001820004.2| DNA repair protein [Aspergillus oryzae RIB40]
Length = 808
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 101/221 (45%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T L+ N GI R
Sbjct: 32 FLSHVHSDHLQGL-ESFRAPFIYCSAATKELLLHIEKYPHRMNFSRGILESRRLHYKHLS 90
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PLN T I I VT L+ANHC G+++ L E +GK++L+TGD R +
Sbjct: 91 KLLRPIPLNTPTEIELNPRLSIRVTLLDANHCTGAVMFLIE-GSGKSILYTGDIRAESWW 149
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLY--------DFPKQEAVIQFVIEAIQAESFNP 561
+ + VL + LD Y + + FP + + +++ + S++
Sbjct: 150 VDSLIRHPVLIPYTLGGRRLDKIYLDSTFARHSSIYRTFPSKANGLAELLQKVA--SYSE 207
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T F ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 208 DTTFYFRAWTFGYEEVWMALSAALNSKIHVDRYQIGLYRSL 248
>gi|49117767|gb|AAH72667.1| Dclre1a protein [Mus musculus]
Length = 782
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 386 GRKHKDIPTWCCVPGTPFRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS 443
G + P + +PGT F VDAF+Y + G C+ +FLTHFH DHY GL++ F +YCS
Sbjct: 684 GEVRRTCPFYKRIPGTGFTVDAFQYGEIEG-CTAYFLTHFHSDHYAGLSKDFTR-PVYCS 741
Query: 444 LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANH 484
IT L+ K+ + ++ LP++ + + + V L+AN
Sbjct: 742 EITGNLLKKKLRVQEQYIRQLPMDTECVVDSVKVVLLDANQ 782
>gi|159130682|gb|EDP55795.1| DNA repair protein, putative [Aspergillus fumigatus A1163]
Length = 549
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 41/221 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T L+ N GI R
Sbjct: 19 FLSHVHSDHLQGL-ESFRAPFIYCSAATRELLLRIEKYPHRMNFSKGILESRRLHYKHLT 77
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PL+ T I I VT L+ANHC G+++ L E +GKAVL+TGD R
Sbjct: 78 KLLRPIPLDTPTEIELTPLLSIRVTLLDANHCAGAVMFLIE-GDGKAVLYTGDIRAERWW 136
Query: 514 ASMSV---------LQTCPIHTLILDTTYCNPLY---DFPKQEAVIQFVIEAIQAESFNP 561
+ V L + + + LDTT+ + + FP + ++ +++ ++A +
Sbjct: 137 VNSLVRHPVLIPYTLGSKKLDKIYLDTTFASINHVCRSFPSKAEGLRELLQKVEA--YPK 194
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+T+F ++T G E +++ ++ L K++++ + + + L
Sbjct: 195 ETIFYFRAWTFGYEDVWIALSAFLNTKVHIDRYQIGLYRSL 235
>gi|330935743|ref|XP_003305110.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1]
gi|311318056|gb|EFQ86823.1| hypothetical protein PTT_17857 [Pyrenophora teres f. teres 0-1]
Length = 2332
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 42/222 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGI------PWDR-- 460
FL+H H DH GL +S +YCS T ++ N GI +DR
Sbjct: 1687 FLSHVHSDHLAGL-QSLRSPFVYCSAATKEILLRLEKFYYRMNFAKGILESRNVTYDRSM 1745
Query: 461 ---LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR---- 508
+ LPL+ T I I VT ++ANHC G+++ L E +GKAVL+TGD R
Sbjct: 1746 RKLAKALPLDTPTEIELAPGNNIRVTLIDANHCVGAVMFLIE-GDGKAVLYTGDIRAETW 1804
Query: 509 FSEEMASMSVLQTCPIHTLILDTTYCN--------PLYDFPKQEAVIQFVIEAIQAESFN 560
+ + VL + L LD Y + P +FP + I+ ++ + ++
Sbjct: 1805 WVNSLVQNPVLLPYTLGNLRLDCMYLDTTFATKKMPYREFPSKAEGIRELLSKVS--EYS 1862
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T+F S+T G E +++ ++ L +I+++ + R+ L
Sbjct: 1863 DDTIFYFHSWTFGYENVWIALSAFLGSQIHLDDYRARIYGSL 1904
>gi|367029759|ref|XP_003664163.1| hypothetical protein MYCTH_52175 [Myceliophthora thermophila ATCC
42464]
gi|347011433|gb|AEO58918.1| hypothetical protein MYCTH_52175 [Myceliophthora thermophila ATCC
42464]
Length = 578
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 40/223 (17%)
Query: 425 MDHYQGLTRSFH--HGKIYCSLITARL----------VNMKIGIPWDRLQV--------- 463
M + GL F G +YCS T + +N GI R+Q
Sbjct: 1 MSTFNGLVAEFPDIRGNVYCSAATKEMLLRLERYPCRINYARGILEARVQKYRHLRNLFK 60
Query: 464 -LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEM 513
+PLN T + + VT L+ANHCPG+++ LFE Q GKAVL+TGD R F +
Sbjct: 61 PIPLNTPTLLELEPENHLQVTLLDANHCPGAVMFLFEGQ-GKAVLYTGDVRAEPWFVNAI 119
Query: 514 A-SMSVLQTCP----IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
A S S+++ I T+ LDT++ + + +FP + I ++ + + T+F +
Sbjct: 120 ARSPSLIEYSSGLKTIDTIYLDTSFIDDV-EFPTKSEGISELLRKVS--RYPSDTIFHLQ 176
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
++T G E ++L +++ L K++V+ K + + L + D ++
Sbjct: 177 AWTYGYEDVWLALSKALGSKVHVDEYKLLMYRSLVATHSDAKF 219
>gi|149244510|ref|XP_001526798.1| hypothetical protein LELG_01626 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449192|gb|EDK43448.1| hypothetical protein LELG_01626 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 639
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 92/215 (42%), Gaps = 64/215 (29%)
Query: 405 VDAFKYLRGDC-SHWFLTHFHMDHYQGLTRSFHHGK-------------------IYCSL 444
VDAF + + +FLTHFH DHY G+++ + + + IYC++
Sbjct: 84 VDAFNFAPHNIIDKYFLTHFHADHYGGISKKWAYERVFDQNSECDYDDDSKYKKIIYCTV 143
Query: 445 ITARLVNMKIGIPWDRLQVLPLNQKTTIA-------GIDVTC------------------ 479
IT +L+ + + +++L ++ + + G+++ C
Sbjct: 144 ITGKLLTLYFSVDPRFIKMLEMDTRYKVQHYAKDDDGLEIVCQDVEDGGIIELEGTSPGL 203
Query: 480 ----LEANHCPGSIIILFEPQNGKA----VLHTGDFRFSEEMASMSVL-----------Q 520
+ ANHCPG+ I LFE +LH GDFR + + +L +
Sbjct: 204 YVIPITANHCPGAGIFLFESIGVDGHIHRILHCGDFRVNMTILDHPLLNRFSVGRHNIEE 263
Query: 521 TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
T I + LDTTY +P Y FPKQE V + E +
Sbjct: 264 TDKIDQVYLDTTYMSPTYVFPKQELVCDTLAELFE 298
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 28/179 (15%)
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVN-----AAKFRVLKC-----LD--FSKEDIQW 611
L L+G+Y IGKERL + + + L+ +IYV+ K+ +L+ LD +++++
Sbjct: 364 LILVGTYVIGKERLAIAILKRLKCQIYVSNINNRKNKYEILRTYQDPYLDSVLTEDELGL 423
Query: 612 FTTNEHESH-----IHVMPMWTLASFKRLKHM--SNQYAGRFSLIVAFSPTGWTFSKGKK 664
++ E +H++PM + S L + N+Y F V PTGW+F++ K
Sbjct: 424 GFEDQAEDDVSDCIVHLVPMNIVGSITELSNYFNHNRYYEYFERCVGLRPTGWSFAQNGK 483
Query: 665 KSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
K P QQ + S EL+E V E +I + R S NA+ +L
Sbjct: 484 K-PDSISQQN------LSSSASTVTAELEETVPLTPLEEVIKCMK--VRTSYNALDHIL 533
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
Y VPYSEH SF EL FV F + +IP+VN
Sbjct: 558 YSVPYSEHSSFRELAYFVVFFNIGKVIPTVN 588
>gi|429848498|gb|ELA23972.1| DNA repair protein [Colletotrichum gloeosporioides Nara gc5]
Length = 638
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 41/219 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------VNMKIGIPWDRLQVLP--- 465
FL+H H DH GL S +YCS T + +N GI R+Q
Sbjct: 32 FLSHIHSDHLAGL-ESLRSPFVYCSAATREMLLRLERYPCRINYAKGILEARVQTYKHLK 90
Query: 466 -------LNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ TT+ I VT L+ANHCPGS++ L E + AVL+TGD R F
Sbjct: 91 NLLKPLPLDTPTTLELAPGRCIQVTLLDANHCPGSVMFLIEDTH-HAVLYTGDIRSEPWF 149
Query: 510 SEEMAS--MSVLQTCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNP-KT 563
+A V TC I TL LDT++ + + P Q + E ++ + P T
Sbjct: 150 VNAVARNPAVVEYTCGIKTLDKIYLDTSF---IQNVPFQTKA-NGIAELLRKVALYPDDT 205
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F I ++T G E++++ +++ LR +I+V+ K RV L
Sbjct: 206 IFHIQAWTYGYEQVWIALSKALRSRIHVDDYKMRVFSSL 244
>gi|297597742|ref|NP_001044453.2| Os01g0783400 [Oryza sativa Japonica Group]
gi|255673755|dbj|BAF06367.2| Os01g0783400 [Oryza sativa Japonica Group]
Length = 217
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 25/167 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRS--FHHGKIYCSLITARLVNMKI-GIPWDRL 461
VD F G +FLTH H DH +GL + + HG +YCS +TARL+ + G+ L
Sbjct: 37 VDKFS---GGSQAYFLTHLHQDHTRGLGAAGGWRHGPLYCSPVTARLLPTRFPGVDASLL 93
Query: 462 QVLPLNQKTT----------IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF-- 509
+ L + + VT + A HCPGS++ LF G +L+TGDFR+
Sbjct: 94 RPLAPGASASLSLSSPSTGRAVSVVVTAIPALHCPGSLMYLFRGDLG-CMLYTGDFRWEL 152
Query: 510 ------SEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFV 550
+ + A + L + L LD TYC+P FP + V + V
Sbjct: 153 RCKRARAAKKALLDALAGDTVDVLYLDNTYCHPSLSFPPRPIVAEQV 199
>gi|198419249|ref|XP_002126836.1| PREDICTED: similar to DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae) isoform 1 [Ciona intestinalis]
Length = 395
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 138/326 (42%), Gaps = 49/326 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCS----LITARLVNMKIGIPWDRLQVLP-------- 465
+FL+H H DH GLT K+ C L T+ + + L +LP
Sbjct: 29 FFLSHCHTDHMVGLTHEAFKYKLKCQPDVKLFTSEVTKCLLLADEKFLFLLPNIEVLLIE 88
Query: 466 ------LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS-MSV 518
+ K+ + + VT L A HCPGS++ LFE G +L+TGDFR S AS M
Sbjct: 89 VPKLLRIKTKSIVEELTVTLLPAGHCPGSVMFLFEGAEG-TMLYTGDFRLSHSSASRMPC 147
Query: 519 LQTCPIHTLILDTTYC-NPLYDFPKQEAVIQFVIEAIQAESF--NPKTLFLIGSYTIGKE 575
L+ I + +DTT+C + P +E ++ +++ +Q N + L S G E
Sbjct: 148 LKNKVIDHIYVDTTFCIEEAWYIPPRELCVKNLLKIVQQWIVRGNQYVVRLNMSAKYGYE 207
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
L E+ + +KIY + AK D TT+ SHI V +
Sbjct: 208 YLIEELHKSFGEKIYCSRAKNY-----DCLPNIASILTTDPTCSHIFVC--------YKT 254
Query: 636 KHMSNQY-AGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-------YEVPYSEHC 687
+ + NQ+ A + + F W + ++ ++ Y + +S H
Sbjct: 255 EILGNQWKASKMDVADMFKNVQW-LTINLSTMYFTNCEEAHVVEVQTNKQCYRLCFSFHS 313
Query: 688 SFTELKEFVKFVSPEHI----IPSVN 709
S +E+ F++ + P HI +PS+N
Sbjct: 314 SLSEICSFLRQIKPTHIHANVLPSIN 339
>gi|336268785|ref|XP_003349155.1| hypothetical protein SMAC_06991 [Sordaria macrospora k-hell]
gi|380089485|emb|CCC12584.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 607
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 41/236 (17%)
Query: 403 FRVDAFKYL--RGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS------LITARLVNMKI 454
RVD F+Y R L+H H DH GL + +YCS L++ V+ +I
Sbjct: 14 IRVDFFRYHPNRRPPLACLLSHVHTDHLAGLD-TLRSPFVYCSAATREILLSLETVSRRI 72
Query: 455 GIPWDRLQVLPLNQKTTIAG-------------------IDVTCLEANHCPGSIIILFEP 495
L+ L+ K I VT L+ANHCPG+++ LFE
Sbjct: 73 NYAQGTLEARQLSYKHLKNLLKPLPLDTPVELELEPGNHIQVTLLDANHCPGAVMFLFEG 132
Query: 496 QNGKAVLHTGDFR-----FSEEMASMSVLQTC----PIHTLILDTTYCNPLYDFPKQEAV 546
Q GKA L+TGD R + S S++Q + T+ LDT++ + FP +
Sbjct: 133 Q-GKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLKTLDTIYLDTSFIEDI-KFPTKAQG 190
Query: 547 IQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
I ++E + + P T+F ++T G E +++ +++ L K++V+ K + + L
Sbjct: 191 ISELLEKVS--KYPPDTMFHFQAWTYGYEDVWVALSKALGSKVHVDEYKMGIYQSL 244
>gi|357126195|ref|XP_003564774.1| PREDICTED: uncharacterized protein LOC100821385 [Brachypodium
distachyon]
Length = 622
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 399 PGTPFRVDAFKYLRGDCSHWFLTHFHMDHY-------QGLTRSFHHGKIYCSLITARLVN 451
PG PF VD + H FLTH H DH G + + ++ SL
Sbjct: 7 PGLPFAVDTWGPSSRRRRHRFLTHAHRDHLVGAGTDPGGGGGTVYSTRLTMSLALRHFPR 66
Query: 452 MKIG--IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF 509
++ G + + + L ++ VT +ANHCPG+++ LFE + G ++LHTGD R
Sbjct: 67 LEQGEFVEIEVGKTLLVDDPA--GAFSVTAYDANHCPGAVMFLFEGEFG-SILHTGDCRL 123
Query: 510 SEE---------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFN 560
+ + +A C + + LD T+ P +E+ IQ VI I
Sbjct: 124 TPDCVQNLPHKYIAKKGRENICRLDFVFLDCTFSKCFLKLPSKESAIQQVIACIWKHPHA 183
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVN 592
P + +G E + +EV+R KIYV+
Sbjct: 184 P--FVYLACDLLGHEAILVEVSRTFGSKIYVD 213
>gi|350637985|gb|EHA26341.1| hypothetical protein ASPNIDRAFT_120082 [Aspergillus niger ATCC
1015]
Length = 774
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 98/211 (46%), Gaps = 43/211 (20%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T ++ N GI R
Sbjct: 26 FLSHVHSDHLQGL-ESFRTPFIYCSAATREMLLRIEKYPHRMNFSKGILESRKLHYKHLS 84
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PLN T + I T +ANHC G+++ L E NGKA+L+TGD R +E
Sbjct: 85 KLLRPIPLNTPTELDLTPRLSIRATLFDANHCTGAVMFLIE-GNGKAILYTGDIR-AEPW 142
Query: 514 ASMSVLQTC----------PIHTLILDTTYCNP---LYDFPKQEAVIQFVIEAIQAESFN 560
S+++ + + +D T+ P + FP + ++ ++ IQA +
Sbjct: 143 WVNSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELLNKIQA--YP 200
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
+T F + ++T G E +++ ++ L K+ +
Sbjct: 201 DRTTFYLRAWTFGYEEVWMALSAALNSKVRI 231
>gi|396480802|ref|XP_003841086.1| hypothetical protein LEMA_P090160.1 [Leptosphaeria maculans JN3]
gi|312217660|emb|CBX97607.1| hypothetical protein LEMA_P090160.1 [Leptosphaeria maculans JN3]
Length = 694
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 54/245 (22%)
Query: 403 FRVDAFKYLRGDCSH-----WFLTHFHMDHYQGLTRSFHHGKIYCSLITARL-------- 449
R+D Y R H FL+H H DH GL S +YCS T +
Sbjct: 14 IRID---YFRQQAEHKPPLACFLSHVHSDHLTGL-ESLRAPFVYCSAATREILLRLEKYH 69
Query: 450 --VNMKIGI------PWDR-----LQVLPLNQKTTIAG-----IDVTCLEANHCPGSIII 491
+N G+ +DR + LPL+ TTI I VTC++ANHC G+++
Sbjct: 70 YRINFAKGVLESRNVTYDRCMRRLAKPLPLDTPTTIELAPGNIIRVTCIDANHCVGAVMF 129
Query: 492 LFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPI---HTL--------ILDTTYCN---PL 537
L E +GKA+L+TGD R E+ ++ L P+ +TL LDTT+
Sbjct: 130 LIE-GDGKAILYTGDIR--AEIWWVNSLVQNPLLLPYTLGPRRLDCMYLDTTFATKSESY 186
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR 597
+FP + I+ ++ I S++ T+F ++T G E +++ ++ L+ +I+++ + R
Sbjct: 187 REFPGKAEGIRELLAKIS--SYSDDTIFYFHAWTFGYENVWIALSNFLKSRIHLDDYRSR 244
Query: 598 VLKCL 602
+ L
Sbjct: 245 IYGSL 249
>gi|198419247|ref|XP_002126890.1| PREDICTED: similar to DNA cross-link repair 1C, PSO2 homolog (S.
cerevisiae) isoform 2 [Ciona intestinalis]
Length = 403
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 138/326 (42%), Gaps = 49/326 (15%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCS----LITARLVNMKIGIPWDRLQVLP-------- 465
+FL+H H DH GLT K+ C L T+ + + L +LP
Sbjct: 29 FFLSHCHTDHMVGLTHEAFKYKLKCQPDVKLFTSEVTKCLLLADEKFLFLLPNIEVLLIE 88
Query: 466 ------LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS-MSV 518
+ K+ + + VT L A HCPGS++ LFE G +L+TGDFR S AS M
Sbjct: 89 VPKLLRIKTKSIVEELTVTLLPAGHCPGSVMFLFEGAEG-TMLYTGDFRLSHSSASRMPC 147
Query: 519 LQTCPIHTLILDTTYC-NPLYDFPKQEAVIQFVIEAIQAESF--NPKTLFLIGSYTIGKE 575
L+ I + +DTT+C + P +E ++ +++ +Q N + L S G E
Sbjct: 148 LKNKVIDHIYVDTTFCIEEAWYIPPRELCVKNLLKIVQQWIVRGNQYVVRLNMSAKYGYE 207
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL 635
L E+ + +KIY + A K D TT+ SHI V +
Sbjct: 208 YLIEELHKSFGEKIYCSRA-----KNYDCLPNIASILTTDPTCSHIFVC--------YKT 254
Query: 636 KHMSNQY-AGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-------YEVPYSEHC 687
+ + NQ+ A + + F W + ++ ++ Y + +S H
Sbjct: 255 EILGNQWKASKMDVADMFKNVQW-LTINLSTMYFTNCEEAHVVEVQTNKQCYRLCFSFHS 313
Query: 688 SFTELKEFVKFVSPEHI----IPSVN 709
S +E+ F++ + P HI +PS+N
Sbjct: 314 SLSEICSFLRQIKPTHIHANVLPSIN 339
>gi|315041635|ref|XP_003170194.1| hypothetical protein MGYG_07438 [Arthroderma gypseum CBS 118893]
gi|311345228|gb|EFR04431.1| hypothetical protein MGYG_07438 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 104/233 (44%), Gaps = 47/233 (20%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH GL S +YCS T ++ N GI R
Sbjct: 26 FLSHVHSDHLTGL-ESLRAPFVYCSTATREILLRIEKYPHRMNFAKGILESRKQHYKHLA 84
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+ +PL T I I VT +ANHCPGS++ L E + KA+ +TGD R +
Sbjct: 85 KLLRPIPLQVPTEIELMPGNTIRVTLFDANHCPGSVMFLIEGGD-KAIFYTGDIRAEAWW 143
Query: 510 SEEMASMSVL-----QTCPIHTLILDTTYCNPL---YDFPKQEAVIQFVIEAIQAESFNP 561
+ + VL C + T+ LDTT+ FP + IQ ++ ++ +
Sbjct: 144 VQSLVRNPVLIPYTMGDCRLDTIYLDTTFATKSDIHQVFPSKAEGIQELLGKVKG--YPK 201
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL------DFSKED 608
T+F + S+T G E ++L ++ L KI+V+ ++ + L DF +D
Sbjct: 202 DTIFYLRSWTFGYEDVWLALSAALNTKIHVDRYQYGLYNSLSSRPGNDFGLDD 254
>gi|448524461|ref|XP_003868993.1| Pso2 DNA cross-link repair protein [Candida orthopsilosis Co
90-125]
gi|380353333|emb|CCG26089.1| Pso2 DNA cross-link repair protein [Candida orthopsilosis]
Length = 572
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 145/357 (40%), Gaps = 62/357 (17%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+PG VD F Y G +FLTH H DH + L + G++YCS +T ++ + G
Sbjct: 11 IPGV--YVDNFSYKGG---VFFLTHNHSDHLKSLLSNSFCGRVYCSQLTKDIIALD-GRY 64
Query: 458 WDRLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
D+L+ L P +T + VT LE+ HCPGS + LFE NG + L TGD R +
Sbjct: 65 CDKLRYLVVKEYNKPFEIQTFCTSVTVTMLESYHCPGSCMFLFECANGISCLATGDIR-A 123
Query: 511 EEMASMSVLQTCPIHTLI-----LDTTYCNPLYDF---------PKQEAVIQFVIEAIQA 556
E+ S+++ + I LD Y + + + P E ++ + E ++
Sbjct: 124 EKWWVSSLIKNRYLFPYIAGLKKLDQIYLDTTFSYRGEPYISILPNSEGIMA-LFEFLKL 182
Query: 557 ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDF------------ 604
+ + F G E ++ +V + + + +K L++
Sbjct: 183 YPVDREIEFSFIDTVSGSEEIWSQVLDHFNGTLDADPSIIERMKLLNYNNGNSNSKFTGP 242
Query: 605 -------SKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW 657
S +D T +H +++ A F K + + A +LI +
Sbjct: 243 MVFNIGNSYKDSPLMITIKHCIDFNIVDY---AGFYLPKKLCDVDASNLTLIRILNSGHQ 299
Query: 658 TFSKGKKKSPGRRW------QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+S G+ W ++ + +S H S+ EL EFVK P+ + P V
Sbjct: 300 IYSYD-----GKTWLLPLNGKELLPTNLMIMFSRHSSYEELIEFVKLFKPKSVFPCV 351
>gi|154334022|ref|XP_001563266.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060278|emb|CAM45688.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 809
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 34/158 (21%)
Query: 398 VPGTPFRVDAFKYLRG---------------DCSHWFLTHFHMDHYQGLTRSFHHGKIYC 442
VP P +D F L G D +FL+HFH DH +GL+ ++ G I
Sbjct: 34 VPSLPIVIDEFPALNGNRRRSSSTGVGSAAGDPELFFLSHFHTDHMKGLSSNWTAGVIIT 93
Query: 443 SLITARLVNMK--------IGIP-WDRLQVLPL----------NQKTTIAGIDVTCLEAN 483
++T L+ K +G+P W R VL + T ++ + VT L A
Sbjct: 94 GILTRELLLSKFEGLRGRVLGLPFWCRTPVLSAAGTAHSTSDSSATTAVSVVYVTLLPAF 153
Query: 484 HCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
H PGS + FE +G LHTGDF+++E +A S L+T
Sbjct: 154 HIPGSAMFFFETPSGVTYLHTGDFKYTEAVAQASPLRT 191
>gi|145348221|ref|XP_001418554.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578783|gb|ABO96847.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 182
Score = 75.9 bits (185), Expect = 7e-11, Method: Composition-based stats.
Identities = 51/147 (34%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 419 FLTHFHMDHYQGLTR-----SFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI- 472
F TH H DH GL R + GKI+C+ IT ++ + + L + + T I
Sbjct: 36 FCTHAHADHVVGLGRRGWSPARAGGKIFCTEITREVLVRRWPTLGRHARALEVGEPTAIR 95
Query: 473 ----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC----PI 524
+ VT ++A HCPGS ++L + G+ VLHTGDFR E+ + + L C PI
Sbjct: 96 LTANTTVTVTLIDAGHCPGSAMVLIDGPRGR-VLHTGDFR-REDFGTRAALPRCVTRAPI 153
Query: 525 HTLILDTTYCNPLYDFPKQEAVIQFVI 551
L LD TY +P FP + + VI
Sbjct: 154 DALYLDNTYAHPTCVFPDRGSATAEVI 180
>gi|157866374|ref|XP_001681893.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125192|emb|CAJ03154.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 775
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 28/152 (18%)
Query: 398 VPGTPFRVDAFKYLRGDCSH---------WFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
VP P +D F L G SH +FLTHFH DH +GL+ ++ G I IT +
Sbjct: 3 VPSLPIIIDEFPALAGSRSHSGSGSGSELFFLTHFHTDHMKGLSSAWTAGLIITGTITRQ 62
Query: 449 LVNMK--------IGIP-WDRLQVLPL----------NQKTTIAGIDVTCLEANHCPGSI 489
L+ K +G+P W R VL T + + VT L A H PGS
Sbjct: 63 LLLNKFEGLRGRVLGLPFWCRTPVLSAAGAAHSETDSTTATAVPVVHVTLLPAFHIPGSA 122
Query: 490 IILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
+I E +G LHTGDF+++E A MS L+T
Sbjct: 123 MIYIETPSGVTYLHTGDFKYTEAAAQMSSLRT 154
>gi|70990712|ref|XP_750205.1| DNA repair protein [Aspergillus fumigatus Af293]
gi|66847837|gb|EAL88167.1| DNA repair protein, putative [Aspergillus fumigatus Af293]
Length = 760
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 99/208 (47%), Gaps = 41/208 (19%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T L+ N GI R
Sbjct: 19 FLSHVHSDHLQGL-ESFRAPFIYCSAATRELLLRIEKYPHRMNFSKGILESRRLHYKHLT 77
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PL+ T I I VT L+ANHC G+++ L E +GKAVL+TGD R
Sbjct: 78 KLLRPIPLDTPTEIELTPLLSIRVTLLDANHCAGAVMFLIE-GDGKAVLYTGDIRAERWW 136
Query: 514 ASMSV---------LQTCPIHTLILDTTYCNPLY---DFPKQEAVIQFVIEAIQAESFNP 561
+ V L + + + LDTT+ + + FP + ++ +++ ++A +
Sbjct: 137 VNSLVRHPVLIPYTLGSKKLDKIYLDTTFASINHVCRSFPSKAEGLRELLQKVEA--YPK 194
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKI 589
+T+F ++T G E +++ ++ L K+
Sbjct: 195 ETIFYFRAWTFGYEDVWIALSAFLNTKV 222
>gi|312382373|gb|EFR27856.1| hypothetical protein AND_04963 [Anopheles darlingi]
Length = 280
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 368 KSFSGSDRKKHAAKDQSKGRKHKDI-PTWCCVPGTPFRVDAFKYLRGD---CSHWFLTHF 423
K+ + R A K +K K + P + + GT F VD F+Y GD +H+FLTHF
Sbjct: 163 KTPAAKPRPSKAPKSNAKKEGRKIVCPKYKIIAGTNFAVDGFRY--GDIEGVTHYFLTHF 220
Query: 424 HMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEAN 483
H DHY GL +SF I S ITARLV I +P + +++ L++ I +++ L+AN
Sbjct: 221 HADHYIGLKKSFAKPLIM-SPITARLVKTFINVPEEHYRLIELHRPIVIDRVEIIALDAN 279
Query: 484 H 484
Sbjct: 280 Q 280
>gi|148675982|gb|EDL07929.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_b [Mus musculus]
Length = 480
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 150/342 (43%), Gaps = 60/342 (17%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK--------IYCSLITARLV--NMKI 454
+D F +FL+H H DH +GL + +YCS +T L+ + K
Sbjct: 16 IDRFDRENLKARAYFLSHCHKDHMKGLRAPSLKRRLECSLKVFLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
+R+ + + T I+ +D VT L A HCPGS NG VL+T
Sbjct: 76 RFWENRIITIEIETPTQISLVDEASGEKEEVVVTLLPAGHCPGS------GSNG-TVLYT 128
Query: 505 GDFRFSE-EMASMSVLQTCP----IHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE- 557
GDFR ++ E + M +L + I ++ LDTT+C+P Y P +E ++ ++E +++
Sbjct: 129 GDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSREQCLRGILELVRSWV 188
Query: 558 SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE--DIQWFTT 614
+ +P ++L G E LF ++ L +++V+ LD K DI T
Sbjct: 189 TRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVDK--------LDMFKNMPDILHHLT 240
Query: 615 NEHESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS 666
+ + IH W K +++Q I T W + +K +
Sbjct: 241 TDRNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPSTMWFGERTRKTN 296
Query: 667 PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 297 VIVRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 335
>gi|356518765|ref|XP_003528048.1| PREDICTED: 5' exonuclease Apollo-like [Glycine max]
Length = 553
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 18/211 (8%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
G PF VD + H FLTH H DH +T + +L L+ +
Sbjct: 8 GLPFSVDTWTPSSSK-RHCFLTHAHKDHSSSITSHSSYPIYSTNLTKTILLQQYPQLDAS 66
Query: 460 RLQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE-- 512
+ L Q I A V+ +ANHCPG+++ LFE + G +LHTGD R + E
Sbjct: 67 LFLNIELGQSLVIHDPAAAPFTVSAFDANHCPGAVMFLFEGKFGN-ILHTGDCRLTPECL 125
Query: 513 -------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLF 565
+ CP+ + LD T+ N P + + IQ VI I + +T++
Sbjct: 126 LNLPDKYVGRKGKEPRCPLDCVFLDCTFGNFSQGMPSKHSAIQQVINCIWKHP-DAQTVY 184
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
L + +G+E + + V+ KIYV+ AK+
Sbjct: 185 LTCN-MLGQEEILVNVSETFGAKIYVDKAKY 214
>gi|336365546|gb|EGN93896.1| hypothetical protein SERLA73DRAFT_78273 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378103|gb|EGO19262.1| hypothetical protein SERLADRAFT_443308 [Serpula lacrymans var.
lacrymans S7.9]
Length = 950
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 105/281 (37%), Gaps = 85/281 (30%)
Query: 399 PGTPF---------RVDAFKYLRGDCSHW------FLTHFHMDHYQGLTRSFHHGKIYCS 443
PGTP+ RVD F + + L+H H DH GL K+ CS
Sbjct: 3 PGTPYNSFVLPYRIRVDEFSDSYKNSESYVKPLLHLLSHTHADHINGLAAKSFGYKVICS 62
Query: 444 -------------------------LITARLVNMKIGIPW-------------DRLQVLP 465
++ ++K+ PW D L LP
Sbjct: 63 NDAKEMLLRHEVYAERALHENDMRAVVKRTFAHLKVD-PWIQPDGTKFYHGSRDLLFALP 121
Query: 466 LNQKT-----TIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASM 516
LN T + + +T ++ANHCPG+++ L + G A+LHTGDFR F + ++
Sbjct: 122 LNTPTPFELNALETVTITLIDANHCPGAVMFLIQGDKG-AILHTGDFRAEPWFLDTLSRN 180
Query: 517 SVLQTC-------------------PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE 557
LQ P+ + LDT P +E + +IE I
Sbjct: 181 PFLQPYIPAENVPAVAEAEGPITYQPLEAIHLDTASLLSTLKVPTKEQAVTGLIELIAL- 239
Query: 558 SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
F P T F I S+T G E + +A KI+V+ K +
Sbjct: 240 -FPPTTYFFINSWTWGYEDILKAIANTFHCKIHVDRYKHSI 279
>gi|8778278|gb|AAF79287.1|AC068602_10 F14D16.17 [Arabidopsis thaliana]
Length = 612
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 157/399 (39%), Gaps = 54/399 (13%)
Query: 348 GSITNVKKVSTPTNGQSGSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFRVDA 407
G++ +N K G D+ K A K K ++P G PF VD
Sbjct: 25 GAVVRSSGSGATSNTTKYKEKMGQGLDKTKAVASSGFKKLK-TEMPR-----GLPFAVDT 78
Query: 408 F---KYLRGDCSHWFLTHFHMDHYQGLTRS-FHHGKIYCSLITARLVNMKI-GIPWDRLQ 462
F + H FLTH H DH G++ S IY + +T L+ + +
Sbjct: 79 FGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFPQLDESYFV 138
Query: 463 VLPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA---- 514
+ + Q + D VT +ANHCPG+++ LFE G +LHTGD R + +
Sbjct: 139 RVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLTLDCLHSLP 197
Query: 515 ------SMSVLQTCPIHTLILDTTYCNPLYD--FPKQEAVIQFVIEAIQAESFNPKTLFL 566
S + C + + LD T+ + FP + + I+ +I I P +
Sbjct: 198 EKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHPDAP--VVY 255
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPM 626
+ +G+E + LEV+R KIYV+ A L+C + + + S H+
Sbjct: 256 LACDMLGQEDVLLEVSRTFGSKIYVDKAT--NLECFRSLMVIVPEIVSEDPSSRFHIFSG 313
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTIIR------- 678
+ + ++ + S + P+ W + W+ G+I +
Sbjct: 314 FPKLYERTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDD-----WKSGSIQKQRKVRFS 368
Query: 679 ---------YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ V YS H S EL+ ++ +SP+ ++ +V
Sbjct: 369 EAVKDEFGLWHVCYSMHSSRAELESAMQLLSPKWVVSTV 407
>gi|391337548|ref|XP_003743129.1| PREDICTED: protein artemis-like [Metaseiulus occidentalis]
Length = 436
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 51/333 (15%)
Query: 414 DCSHWFLTHFHMDHYQGL----TRSF---HHGKIYCSLITARLVN--MKIGIPWDRLQVL 464
D +FL+H H DH G+ +S+ KIY S +T R++ K D L
Sbjct: 24 DIRAYFLSHDHSDHQYGIDDPDLQSYIIKDSLKIYASPLTVRMLRNRRKFEELHDAFHPL 83
Query: 465 PLN--QKTTIAG------IDVTCLEANHCPGSIIILFEPQNGK-AVLHTGDFRFSEEMAS 515
PL+ K I + VT A H GS++ +FE + K L+TGDFR S++
Sbjct: 84 PLDVPHKIVIGSSESAYPVTVTLTSAEHIVGSVMFVFERETPKFRCLYTGDFRLSKQDLK 143
Query: 516 MSVLQTC--------PIHTLILDTTYCNP--LYDFPKQEAVIQFVIEAI----QAESFNP 561
L+ C P + D+T+C P L++ P +E V+++V + Q + N
Sbjct: 144 ---LKRCFKLHRGLKPFDAIYFDSTWCTPKNLWNIPTREEVLRYVEPLVNTHLQEDESNY 200
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
++ + Y +G E L L++AR+ ++V + + K DI TT I
Sbjct: 201 ICVYTM--YDVGYENLLLDLARIADSAVHVTEERASLYKGFP-GMTDI--LTTEPRNCRI 255
Query: 622 HV----MPMWTLASFKRLKHMSNQY-AGR-FSLIVAFSPTGWTFSKGKKKSPGRRWQQGT 675
H P W K + Y +GR L+ ++ + +++P + ++
Sbjct: 256 HFCQKGYPSWK----KSCSQVRRDYNSGRVMRLVFSYKKFIEEHKENPEQNPYVQNKKDK 311
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ Y V +S H S E+ + V ++SP+ + +V
Sbjct: 312 YL-YHVCWSTHPSLAEVSDLVNYLSPDSLHANV 343
>gi|91090768|ref|XP_969213.1| PREDICTED: similar to artemis protein [Tribolium castaneum]
gi|270013270|gb|EFA09718.1| hypothetical protein TcasGA2_TC011851 [Tribolium castaneum]
Length = 383
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 141/337 (41%), Gaps = 43/337 (12%)
Query: 394 TWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI-------YCSLIT 446
T +PG VD F D +FL+H H DH +GL H K+ Y S ++
Sbjct: 7 TLAEIPG--ISVDRFDGANLDSEAFFLSHCHTDHMKGLEAPEFHEKLAQNRRFLYLSHVS 64
Query: 447 ARLVNMKIGIPWDRLQVLPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKAVL 502
A +V D L L + T++ I VT + A HCPGSI+ LFE Q VL
Sbjct: 65 AEIVRRMFPKIGDNLIELDMRSPTSVFLQSGAISVTPIPAGHCPGSIMFLFEAQVN--VL 122
Query: 503 HTGDFR--------FSEEMASMSVLQTCPIHTLILDTTYCNPLY-DFPKQEAVIQFVIEA 553
+TGD+R F+ S++ + I + LDTT+ Y FP + ++ +
Sbjct: 123 YTGDYRINPRDIPKFTAFYDSLNAKKR--IEAVYLDTTFFLKSYAKFPPRAESLEEICSI 180
Query: 554 IQ--AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
I + + L S G E LF+E+ + ++ I+VN + + ++
Sbjct: 181 ISDWISRSDKHVIGLDTSAKYGYEYLFIEIYKQIKMPIHVNDEIYEFYSRV----PEMDR 236
Query: 612 FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRW 671
T ++ IH T ++ + + Y + + AF W K +S
Sbjct: 237 AVTRSKDTRIHSACGTT---YRTVCPNTVHYNVKVVKVSAFR---W-----KSESLQNGI 285
Query: 672 QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ T + V YS H SF E E VKF+ P + +V
Sbjct: 286 SEKTHNTHFVCYSTHASFEEGVELVKFLEPRKVEANV 322
>gi|156053902|ref|XP_001592877.1| hypothetical protein SS1G_05799 [Sclerotinia sclerotiorum 1980]
gi|154703579|gb|EDO03318.1| hypothetical protein SS1G_05799 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1133
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 41/237 (17%)
Query: 403 FRVDAFKYLRGDCS--HWFLTHFHMDHYQGLTRS-FHHGKIYCSLITARLV--------- 450
RVD F + G S +FL+H H DH GL +YCS T ++
Sbjct: 14 IRVDYFCQIPGRTSPLAYFLSHVHSDHLVGLDNDRVKLPFVYCSAATKEILIRLEKRRDR 73
Query: 451 -NMKIGIPW----------DRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFE 494
N+ GI + L+ +PL+ T I + VT +ANHC G+++ LFE
Sbjct: 74 LNLAQGILEKEERTYKHLKNVLKPVPLDTPTLIELAPKNEVRVTLFDANHCTGAVMFLFE 133
Query: 495 PQNGKAVLHTGDFR----FSEEMASMSVL--QTCPIHTL---ILDTTYCNPLYDFPKQEA 545
+N AVL+TGD R F + L T + TL LDT+ P+ +FP +
Sbjct: 134 REN-TAVLYTGDIRSEPWFVNNLTRNPFLIEYTSGMKTLDCIYLDTSNIGPM-EFPTKAE 191
Query: 546 VIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
++ +I ++ + P T F ++T G E ++ ++R L +I+V+ K ++ + L
Sbjct: 192 GLKELIGKVR--KYPPNTKFHFAAWTFGYEEVWAALSRTLDSQIHVDKYKIKLYESL 246
>gi|296422781|ref|XP_002840937.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637164|emb|CAZ85128.1| unnamed protein product [Tuber melanosporum]
Length = 747
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 42/212 (19%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FLTH H DH QGL + IYCS T L+ N+ G+ R
Sbjct: 81 FLTHIHSDHLQGLEGFYGGPFIYCSAATKELLIKLERRLHRFNLAKGVLEARRCLYAEKE 140
Query: 461 --LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
L+V+PL T + + VT +ANHCPG+++ L E +GKA+L+TGD R +
Sbjct: 141 KKLKVIPLETPTMVEIGSGKSLRVTLFDANHCPGAVMFLIE-GDGKAILYTGDIRAEKWW 199
Query: 510 SEEMASMSVLQTCPIHTLILDTTYCNPLYDF---------PKQEAVIQFVIEAIQAESFN 560
+ + VL + LD Y + + KQ+ + + + Q +
Sbjct: 200 VDYLKRHPVLVPYAMGLKTLDKIYLDTSFAGRSKIHEVFRSKQDGIHELL---SQVRKYP 256
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVN 592
T+F + ++T G E ++ +A KI+++
Sbjct: 257 QDTIFHLNAWTFGYEEAWVALASAFDSKIHLS 288
>gi|260814123|ref|XP_002601765.1| hypothetical protein BRAFLDRAFT_215154 [Branchiostoma floridae]
gi|229287067|gb|EEN57777.1| hypothetical protein BRAFLDRAFT_215154 [Branchiostoma floridae]
Length = 387
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 150/329 (45%), Gaps = 50/329 (15%)
Query: 418 WFLTHFHMDHYQGL--------TRSFHHGKIYCSLIT-ARLVNMKIGIPWDRLQV-LPLN 467
+FL+H H DH GL ++ ++YCS IT A L+ K P + V + ++
Sbjct: 29 FFLSHAHRDHMVGLDNPGFLSRLKASLKTRLYCSDITKALLLTEKQFKPLEPYIVSVQID 88
Query: 468 QKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM- 516
T++ D VT L+A HCPGS++ LFE G VL+TGDFR A+
Sbjct: 89 TPTSLTVTDEVTGKEHSLLVTLLQAGHCPGSVMFLFEGLEG-TVLYTGDFRLPVGGAAQF 147
Query: 517 ----SVLQTCPIHTLILDTTYCNPLYDF-PKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ I +L +DTT+ P + P +E +I +Q S+ K +
Sbjct: 148 QHLHQGDRLKDIQSLYVDTTFLVPEAKYIPSREDCCTALINVVQ--SWISKGAHYVVRMN 205
Query: 572 ----IGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMW 627
G E LF+E+ R K++VN V + + E Q T++ E+ IH
Sbjct: 206 CKAKYGYEYLFIELCRRFNMKVHVNDPS--VYQAI---PEIFQCLTSDPSETQIHA---- 256
Query: 628 TLASFKRLKH-MSNQY---AGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY 683
+++ +H + +Y +++ +P+ F+ PG ++G+ + V +
Sbjct: 257 --CRYQKGRHPLPCKYRPPPPHELEVMSVTPSTMWFT--AYAGPGDVIRKGSRHHHRVCF 312
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSVNNDG 712
S H S+TE+++FV ++ P+ + +V G
Sbjct: 313 SFHSSYTEIRDFVGYIRPKTVHANVAPVG 341
>gi|393905092|gb|EFO18773.2| hypothetical protein LOAG_09723 [Loa loa]
Length = 620
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 141/315 (44%), Gaps = 44/315 (13%)
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM--------KIGIPWDRLQVLP 465
D + FL+ + H LT + + IYCS ITA+L+++ +I W ++ L
Sbjct: 26 DVKYCFLSGANPYHCHKLTSKWQNNGIYCSPITAKLLSVISSRRKRYRILNKW--IRPLD 83
Query: 466 LNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA---VLHTG----DFRFSEEMASMSV 518
LN + G V ++ANH PGS++++ E ++ +L+TG D RF + + ++S
Sbjct: 84 LNVWHKMNGFRVMLIDANHAPGSVMLIIEGEHRTTLGRILYTGFFRADTRFYQNVIALSA 143
Query: 519 LQTCPIHTLILDTTYCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERL 577
LQ + +D+ Y + ++P + + + ++ +N I IG E
Sbjct: 144 LQEKKFDVICIDSNYVDFTREEYPNRRSSAKEAANLLRILKYNGVDNVAIPVPIIGCESF 203
Query: 578 FLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKH 637
+ ++R L+ KI+++ +F + + L +F+ + +++I WT + + +
Sbjct: 204 LVNISRELKCKIWLHPERFEIAQILGID----DYFSETKGDTYI-----WTCSQIESREV 254
Query: 638 MS--NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEF 695
+S + + R S+ P G R + + YS+HCS EL+ F
Sbjct: 255 LSTTDSHIIRISMAPYVMP--------NISLNGER-------EHVIQYSDHCSSGELRSF 299
Query: 696 VKFVSPEHIIPSVNN 710
+ ++ I NN
Sbjct: 300 LSLLTFSRITAISNN 314
>gi|297844862|ref|XP_002890312.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
lyrata]
gi|297336154|gb|EFH66571.1| hypothetical protein ARALYDRAFT_472127 [Arabidopsis lyrata subsp.
lyrata]
Length = 547
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 142/347 (40%), Gaps = 48/347 (13%)
Query: 400 GTPFRVDAF---KYLRGDCSHWFLTHFHMDHYQGLTRS-FHHGKIY-CSLITARLVNMKI 454
G PF VD F + H FLTH H DH G++ S IY SL + L+
Sbjct: 8 GLPFAVDTFGPYTTTKRIKRHHFLTHAHKDHTVGISPSNIVVFPIYSTSLTISLLIQRHP 67
Query: 455 GIPWDRLQVLPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ + + Q + D VT +ANHCPG+++ LFE G +LHTGD R +
Sbjct: 68 QLDESFFVRIEIGQSVIVDDPDGQFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 126
Query: 511 EE-MASM---------SVLQTCPIHTLILDTTYCNPLYD--FPKQEAVIQFVIEAIQAES 558
+ + S+ V C + + LD T+ + FP + + I+ VI I
Sbjct: 127 LDCLQSLPEKYVGRRHGVAPKCCLDYIFLDCTFGKSSHSQRFPSKHSAIRQVINCIWNHP 186
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
P + + +G+E + LEV+R KIYV+ A L+C + + +
Sbjct: 187 DAP--VVYLACDMLGQEDVLLEVSRTFGSKIYVDKAT--NLECFRSLMVIVPEIVSEDPS 242
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTII 677
S H+ + + ++ + S + P+ W + W+ G+I
Sbjct: 243 SRFHIFSGFPKLYERTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDD-----WESGSIQ 297
Query: 678 R----------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + V YS H S EL+ ++ +SP+ ++ +V
Sbjct: 298 KQRKVRFSEAVKDEFGLWHVCYSMHSSREELESAMQLLSPKWVVSTV 344
>gi|85090777|ref|XP_958580.1| hypothetical protein NCU05966 [Neurospora crassa OR74A]
gi|28919953|gb|EAA29344.1| predicted protein [Neurospora crassa OR74A]
Length = 570
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 41/215 (19%)
Query: 425 MDHYQGLTRSFHHGKI---YCSLIT----------ARLVNMKIGIPWDR----------L 461
M + GL F ++ YCS T AR +N GI R L
Sbjct: 1 MSTFNGLLAEFPDIRVHSVYCSAATREILLRLETVARRINYAQGILEARQLSYKHLRNLL 60
Query: 462 QVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR-----FSE 511
+ LPL+ + I VT L+ANHCPG+++ LFE Q GKA L+TGD R +
Sbjct: 61 KPLPLDTPVELELEPGNHIQVTLLDANHCPGAVMFLFEGQ-GKAALYTGDIRSEPWHVNA 119
Query: 512 EMASMSVLQTC----PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
S S++Q + T+ LDT++ + +FP + I +++ + + PKT+F
Sbjct: 120 IARSPSMVQYAYGLKTLDTIYLDTSFVEDI-EFPTKARGISELLDKVS--KYPPKTIFHF 176
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
++T G E +++ +++ L+ +++V+ K + + L
Sbjct: 177 QAWTYGYEDVWIALSKALQSRVHVDEYKMGIYQSL 211
>gi|224093392|ref|XP_002309909.1| predicted protein [Populus trichocarpa]
gi|222852812|gb|EEE90359.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 94/229 (41%), Gaps = 44/229 (19%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQG-LTRSFHHGKIYCSLITARLVNMKIGIPW 458
G PF VD + H FLTH H DH G LT S + IY + +T LV
Sbjct: 8 GLPFSVDTWSPNSKRKRHHFLTHAHKDHTSGILTHSCY--PIYATHLTKLLV-------- 57
Query: 459 DRLQVLPLNQKTTIAGIDV---------------TCLEANHCPGSIIILFEPQNGKAVLH 503
LQ P + + GI+V T +ANHCPG+++ LFE G +LH
Sbjct: 58 --LQNYPQLEGSLFVGIEVGESVVFNDPDGEFKVTAFDANHCPGAVMFLFEGNFGN-ILH 114
Query: 504 TGDFRFSEE---------MASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI 554
TGD R + E ++ C + + LD T+ P + + IQ V+ I
Sbjct: 115 TGDCRLTPEGVRCLPEKYISKKGKEPRCQLDYVFLDCTFGKFTQKLPSKHSAIQQVLNCI 174
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV----NAAKFRVL 599
T+ + +G+E + V+ KI+V N FR L
Sbjct: 175 WKHP--AATVVYLTCDLLGQEDVLAAVSETFGSKIFVDEVANTESFRAL 221
>gi|18394685|ref|NP_564070.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
gi|332191672|gb|AEE29793.1| DNA repair metallo-beta-lactamase family protein [Arabidopsis
thaliana]
Length = 549
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 400 GTPFRVDAF---KYLRGDCSHWFLTHFHMDHYQGLTRS-FHHGKIYCSLITARLVNMKI- 454
G PF VD F + H FLTH H DH G++ S IY + +T L+ +
Sbjct: 8 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 67
Query: 455 GIPWDRLQVLPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ + + Q + D VT +ANHCPG+++ LFE G +LHTGD R +
Sbjct: 68 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 126
Query: 511 EEMA----------SMSVLQTCPIHTLILDTTYCNPLYD--FPKQEAVIQFVIEAIQAES 558
+ S + C + + LD T+ + FP + + I+ +I I
Sbjct: 127 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHP 186
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
P + + +G+E + LEV+R KIYV+ A L+C + + +
Sbjct: 187 DAP--VVYLACDMLGQEDVLLEVSRTFGSKIYVDKAT--NLECFRSLMVIVPEIVSEDPS 242
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTII 677
S H+ + + ++ + S + P+ W + W+ G+I
Sbjct: 243 SRFHIFSGFPKLYERTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDD-----WKSGSIQ 297
Query: 678 R----------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + V YS H S EL+ ++ +SP+ ++ +V
Sbjct: 298 KQRKVRFSEAVKDEFGLWHVCYSMHSSRAELESAMQLLSPKWVVSTV 344
>gi|196231624|ref|ZP_03130482.1| DNA ligase I, ATP-dependent Dnl1 [Chthoniobacter flavus Ellin428]
gi|196224477|gb|EDY18989.1| DNA ligase I, ATP-dependent Dnl1 [Chthoniobacter flavus Ellin428]
Length = 894
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 127/297 (42%), Gaps = 43/297 (14%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
F++H H DH H + S TARL+ ++G + +L Q + +T
Sbjct: 29 FVSHAHADHIA------RHPEFIASAGTARLMQARLG-GERQGHILEFGQPASFRDFQIT 81
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
L A H GS L E ++G ++L+TGDF+ + S + TLI++TTY P Y
Sbjct: 82 LLPAGHIFGSAQSLIESEHG-SLLYTGDFKLRRGL-SAEPTEWRHAETLIMETTYGLPKY 139
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL------EVARVLRKKIYVN 592
P EAV+ ++ Q ES + ++ Y++GK + L + +L +Y
Sbjct: 140 RLPPTEAVMARMVAFCQ-ESLEDGAVPVLLGYSLGKAQEILCAILKAGLTPMLHGAVYQM 198
Query: 593 AAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAF 652
+R LK DF + + ++ + E + + P S R ++ R +++
Sbjct: 199 TEIYRQLKP-DFP-DGYERYSAGKVEGKVLICP----PSANRTIMLTRIKNRRVAVL--- 249
Query: 653 SPTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEFVKFVSPEHII 705
TGW G RY+ P S+H +T+L +V V P+ ++
Sbjct: 250 --TGWALDP------------GATYRYQCDAAFPLSDHADYTDLVRYVDLVQPKRVL 292
>gi|332027906|gb|EGI67961.1| Protein artemis [Acromyrmex echinatior]
Length = 348
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 144/347 (41%), Gaps = 63/347 (18%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF------HHGKIYCSLITARLVN 451
+PG VD F + S +FL+H H+DH GL F ++ +YCS IT +
Sbjct: 11 IPGIS--VDRFDRENMNSSVYFLSHCHIDHMCGLNNMFFDHLKQYNKYLYCSHITKVFLE 68
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDV---TCLE-------------------ANHCPGSI 489
K ++ L+ N +T + I+V C+E A HCPGS+
Sbjct: 69 NKY---YENLR----NVETYVKDIEVDKKVCIEYRSNYNSEETDILFVTFTSAGHCPGSV 121
Query: 490 IILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC-----PIHTLILDTTYCNPLYDF-PKQ 543
+ +FE N K +L+TGDFR + + C + LDTT+ + + P +
Sbjct: 122 MFVFEKMN-KLILYTGDFRINPKDYRKIKSLNCNDFPKKFDNIYLDTTFLGHDFAYLPTR 180
Query: 544 EAVIQFVIEAIQ--AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC 601
I + + ++ + K + L S G E L+++++ L+ I+V +
Sbjct: 181 IESINVMCKVVKEWLDESPRKVVILECSALYGSEFLYMKLSESLKTLIHVKECVYNSYIR 240
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK 661
+ E T N ++ IH A + M+ Q L + S W K
Sbjct: 241 I---PELACHVTNNPLDARIH-------ACMSKYVCMNRQDI----LTIVPSVKKW---K 283
Query: 662 GKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
G S W + + V YS H SF ELK+F+++ P+ I P V
Sbjct: 284 GHDTSVVGEWDKFREKTFNVCYSTHASFDELKKFIQYFKPKKIHPCV 330
>gi|414879397|tpg|DAA56528.1| TPA: hypothetical protein ZEAMMB73_183608 [Zea mays]
Length = 629
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 137/333 (41%), Gaps = 42/333 (12%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHY-QGLTRSFHHGKIYCSLITARL--------- 449
G PF VD + H FLTH H DH G +Y + +T L
Sbjct: 8 GLPFAVDTWGSSSRSRRHRFLTHAHRDHLVGAGADIDGGGIVYATRLTLHLALRHFPQLG 67
Query: 450 ----VNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
V M++G R V+ + VT +ANHCPG+++ LFE Q G +LHTG
Sbjct: 68 SWEFVEMEVG----RTLVV----DDPVGAFSVTTYDANHCPGAVMFLFEGQFG-TILHTG 118
Query: 506 DFRFSEEMASMSVLQ---------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
D R + + ++ C + + LD T+ P +++ I+ ++ I
Sbjct: 119 DCRLTPDCVQNLPMKYITKKGNENICRLDFVFLDCTFSKCFLKLPSKDSAIRQRLQVISC 178
Query: 557 --ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
+ + +FL +G E + +EV+R KIYV+ K K L + +I T
Sbjct: 179 IWKHLHAPFVFLACDL-LGHEDILVEVSRTFGTKIYVD-RKLDCFKALSLTAPEI---IT 233
Query: 615 NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSP-TGWTFSKGKKKSPG-RRWQ 672
++ S ++ L + K ++ A + P T W + + P +
Sbjct: 234 DDSSSRFQMVGFHQLHD-RASKELAEARANLQPEPLFIRPSTQWYATCARSPKPSLTEAE 292
Query: 673 QGTIIRYEVPYSEHCSFTELKEFVKFVSPEHII 705
Q + + V +S H S EL++ ++ + P +I
Sbjct: 293 QDELGIWHVCFSIHSSRDELEQALQLLQPHWVI 325
>gi|21554701|gb|AAM63664.1| unknown [Arabidopsis thaliana]
Length = 545
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 141/347 (40%), Gaps = 48/347 (13%)
Query: 400 GTPFRVDAF---KYLRGDCSHWFLTHFHMDHYQGLTRS-FHHGKIYCSLITARLVNMKI- 454
G PF VD F + H FLTH H DH G++ S IY + +T L+ +
Sbjct: 4 GLPFAVDTFGPYTETKRRKRHHFLTHAHKDHTVGVSPSNIVVFPIYSTSLTISLLLQRFP 63
Query: 455 GIPWDRLQVLPLNQKTTIAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
+ + + Q + D VT +ANHCPG+++ LFE G +LHTGD R +
Sbjct: 64 QLDESYFVRVEIGQSVIVDDPDGEFKVTAFDANHCPGAVMFLFEGSFGN-ILHTGDCRLT 122
Query: 511 EEMA----------SMSVLQTCPIHTLILDTTYCNPLYD--FPKQEAVIQFVIEAIQAES 558
+ S + C + + LD T+ + FP + + I+ +I I
Sbjct: 123 LDCLHSLPEKYVGRSHGMKPKCSLGYIFLDCTFGKSSHSQRFPTKHSAIRQIINCIWNHP 182
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE 618
P + + +G+E + LEV+R KIYV+ A L+C + + +
Sbjct: 183 DAP--VVYLACDMLGQEDVLLEVSRTFGSKIYVDKAT--NLECFRSLMVIVPEIVSEDPS 238
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTII 677
S H+ + + ++ + S + P+ W + W+ G+I
Sbjct: 239 SKFHIFSGFPKLYERTSAKLAEARSKLQSEPLIIRPSAQWYVCDDEDD-----WKSGSIQ 293
Query: 678 R----------------YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ + V YS H S EL+ ++ +SP+ ++ +V
Sbjct: 294 KQRKVRFSEAVKDEFGLWHVCYSMHSSRAELESAMQLLSPKWVVSTV 340
>gi|218883420|ref|YP_002427802.1| RNA procession exonuclease-like protein [Desulfurococcus
kamchatkensis 1221n]
gi|218765036|gb|ACL10435.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Desulfurococcus kamchatkensis
1221n]
Length = 362
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 139/313 (44%), Gaps = 48/313 (15%)
Query: 420 LTHFHMDHYQGLTRSFHHGK-IYCSLITARLVNM-----KIGIPWDRLQVLPLNQK--TT 471
+TH H+DH GL S + K I + IT L+ K +P+ RL+ PLN K
Sbjct: 41 ITHAHVDHLGGLEESIKYSKMIIATSITLDLIESLNYVDKYLLPYYRLKKKPLNYKECLV 100
Query: 472 IAGIDVTCL-EANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILD 530
I + CL +A+H PG+ + E + + + +TGDF+ + M L L+++
Sbjct: 101 IDDNETLCLFQASHIPGAAQVYVEYRELR-LGYTGDFKLDGKTQVMKDLDV-----LVME 154
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF------LEVARV 584
+TY NP Y P ++ V + ++ + K +++ G + +E + +E +
Sbjct: 155 STYGNPNYRRPFKDGVPELFASLVEEGLYRYKRVYVYGYHGKVQEAMIILREKGIEAPFI 214
Query: 585 LRKKIYVNAAKFRVL-----KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS 639
L KIY + RVL K ++ E+ N E + + +A ++RL
Sbjct: 215 LPSKIYHST---RVLEKYGIKIGNYMHEEDMLRGLNPGEKAV-IFKHMNVAEYRRLD--- 267
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
G IV +GW F+K P RR T Y V S+H F +L E+V+
Sbjct: 268 ----GSALHIVL---SGWEFNK-----PFRRIDDYT---YLVALSDHADFDDLVEYVRRG 312
Query: 700 SPEHIIPSVNNDG 712
P+ ++ + +G
Sbjct: 313 EPKLVVIDASREG 325
>gi|312384994|gb|EFR29591.1| hypothetical protein AND_01303 [Anopheles darlingi]
Length = 265
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 20/198 (10%)
Query: 412 RGDCSHWFLTHFHMDHYQGL-TRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT 470
R S +FL+H H DH +GL G ++ S ++ + + R++ + + ++
Sbjct: 24 RQRASAFFLSHCHTDHMRGLELDDVLPGPLFLSPVSGVFIRHRFPQHAPRVRTMAIGEQL 83
Query: 471 TIA-----------GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
T+ + V + A HCPGS++ FE + +L+TGDFR S+ + SV+
Sbjct: 84 TLTIHPAEPGEEEYELTVRSIAAEHCPGSVMFFFETTTER-ILYTGDFRLSQGHGNTSVI 142
Query: 520 QTCPIHTLILDTTYCNPLYD-FPKQ----EAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
++ + LD+T+ N Y+ FP + E ++ E + + N +L+L G
Sbjct: 143 RSLRPQIVYLDSTFLNQDYNHFPTRIESTEKIVALCSEWLAEDKRNRVSLWLPAH--CGS 200
Query: 575 ERLFLEVARVLRKKIYVN 592
E LFL + +++KI+V+
Sbjct: 201 EDLFLSIYERMQEKIHVS 218
>gi|402081919|gb|EJT77064.1| hypothetical protein GGTG_06978 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 615
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 40/224 (17%)
Query: 425 MDHYQGLTRSFH--HGKIYCSLITARL----------VNMKIGIPWDRLQV--------- 463
M + G+ R G +YCS T L +N GI R+Q
Sbjct: 1 MSTFDGIIREIPDIRGNVYCSAPTRELLLRLERYPCRINYANGILEARVQTYKHLKTLLK 60
Query: 464 -LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR-----FSEE 512
+PL TTI + VT +ANHC G+++ LFE +GKAV++TGD R S
Sbjct: 61 PIPLETPTTIELEPGRRLRVTLFDANHCTGAVMFLFE-GDGKAVVYTGDIRSEPWHISAI 119
Query: 513 MASMSVLQ-TCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
S +L+ +C I TL LDT++ + + PK + + + + + Q + T+F
Sbjct: 120 ARSPCLLEYSCGIKTLDRIYLDTSFIDDTHFPPKADGIRELLRKVAQ---YPDDTVFHFR 176
Query: 569 SYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWF 612
++T G E +++ +A+ LR +I++++ + + + L ++ F
Sbjct: 177 AWTFGYEAVWIALAKALRSQIHIDSYRLGLYRSLAPKDRNMAQF 220
>gi|125601931|gb|EAZ41256.1| hypothetical protein OsJ_25764 [Oryza sativa Japonica Group]
Length = 619
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 30/242 (12%)
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP 536
VT +ANHCPG+++ LFE + VLHTGD R + + ++ + LD T+
Sbjct: 46 VTAFDANHCPGAVMFLFEGASFGRVLHTGDCRLTPDFRFLAA------DYVFLDCTFAAC 99
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK- 595
FP ++ I+ VI I N ++L+ S +G+E + +EV++V KIYV+ K
Sbjct: 100 SLHFPSKDDSIRQVINCIWKHP-NAPVVYLV-SDMLGQEEILMEVSKVFGSKIYVDRDKN 157
Query: 596 FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA-------SFKRLKHMSNQYAGRFSL 648
L +I T++ S V+ L+ + R KH L
Sbjct: 158 SECYHTLSLVAPEI---LTDDSSSRFQVIGFPRLSERATEMLALARAKHQPE------PL 208
Query: 649 IVAFSPTGWTFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEH 703
I+ S + + + + S R+ +R + V +S H S EL++ ++F+ P+
Sbjct: 209 IIRASSQWYAYYEPPEGSTKRKPALTEPMRDEFGVWHVCFSMHSSREELEQALRFIQPKW 268
Query: 704 II 705
+I
Sbjct: 269 VI 270
>gi|121702877|ref|XP_001269703.1| hypothetical protein ACLA_030100 [Aspergillus clavatus NRRL 1]
gi|119397846|gb|EAW08277.1| hypothetical protein ACLA_030100 [Aspergillus clavatus NRRL 1]
Length = 792
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH QGL SF IYCS T ++ N GI R
Sbjct: 51 FLSHVHSDHLQGL-ESFRAPFIYCSAATREMLLRIEKYPHRMNFSKGILESRRLHYKHLS 109
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PLN T I I VT +ANHC G+++ L E +G A+L+TGD R
Sbjct: 110 RLLRPIPLNTPTEIELTPLLSIRVTLFDANHCAGAVMFLIE-GDGNAILYTGDIRAEPWW 168
Query: 514 ASMSVLQTCPI-HTL--------ILDTTYCNPLYDFPKQEAVIQFVIEAIQ-AESFNPKT 563
+ + I +TL +DTT+ + P + + + E +Q E + T
Sbjct: 169 VNSLIRHPVLIPYTLCGKRLDKIYIDTTFARANHVCPSFPSKAEGLSELLQMVERYPQDT 228
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 229 VFYFRAWTFGYEDVWVALSARLNSKIHVDRYQVGLYRSL 267
>gi|171909556|ref|ZP_02925026.1| DNA ligase I, ATP-dependent (dnl1) [Verrucomicrobium spinosum DSM
4136]
Length = 921
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 128/295 (43%), Gaps = 38/295 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA-GIDV 477
F++H H DH+ H CS +T +++ + G + P + G ++
Sbjct: 36 FVSHAHSDHFA------RHEFTLCSPVTHAIIDKRYGAITAGASLAPAYGEAVFERGHEL 89
Query: 478 TCLEANHCPGSIII-LFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP 536
L A H GS ++ + ++G +L+TGD++ + + P HTLI++TT+ P
Sbjct: 90 RLLPAGHILGSAMLHVTRQEDGATLLYTGDYKLRHGRTAEPA-ELRPAHTLIMETTFGLP 148
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
+Y FP QE V+ +I+ + E+ + + ++ Y++GK + L + ++ +
Sbjct: 149 MYVFPPQEQVLSDIIQWAR-ETLEDQGIPVLLGYSLGKAQEVLSAFHGAGLPVMLHPSIV 207
Query: 597 RV-LKCLDFSKE--DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
++ C F + + F H+ +MP S R + + R +++
Sbjct: 208 KMTAACAPFFPDFPPYEKFDPATATGHVLIMP----PSAARSQAIRKLRVCRTAML---- 259
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYEV----PYSEHCSFTELKEFVKFVSPEHI 704
+GW + G K RY+V P S+H + EL + V+ V P +
Sbjct: 260 -SGWALTPGAK------------YRYQVDEVFPLSDHADYPELLKTVEEVQPRQV 301
>gi|154295597|ref|XP_001548233.1| hypothetical protein BC1G_13069 [Botryotinia fuckeliana B05.10]
Length = 352
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 114/245 (46%), Gaps = 43/245 (17%)
Query: 404 RVDAFKYLRGDCSHW--FLTHFHMDHYQGLTRS-FHHGKIYCSLITARLVNMKIGIPWDR 460
RVD F+ + G + FL+H H DH +GL + +YCS T R + +++ DR
Sbjct: 15 RVDHFRQIIGRTAPLACFLSHVHSDHLEGLDNDRVNLPFVYCSAAT-REILLRLEKRRDR 73
Query: 461 LQV---------------------LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFE 494
L + +PL T I + VT ++NHC G+++ LFE
Sbjct: 74 LNLAQGILEKEKRTYKHLKSVLKPIPLETPTLIELAPKNEVRVTLFDSNHCTGAVMFLFE 133
Query: 495 PQNGKAVLHTGDFR----FSEEMASMSVL--QTCPIHTL---ILDTTYCNPLYDFPKQEA 545
+N AVL+TGD R F + L T + TL LDT+ PL FP +
Sbjct: 134 KEN-IAVLYTGDVRSEIWFVNNLTRSPFLIEYTSGMKTLDCIYLDTSNTGPL-AFPTKAD 191
Query: 546 VIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
++ +I+ ++ + P T F ++T G E ++ ++R L +I+V+ K+++ + L
Sbjct: 192 GLKEMIDKVR--KYPPNTKFHFSAWTFGYEEVWAALSRTLDSQIHVDKYKYKLYQSLRQE 249
Query: 606 KEDIQ 610
D Q
Sbjct: 250 GSDGQ 254
>gi|156404099|ref|XP_001640245.1| predicted protein [Nematostella vectensis]
gi|156227378|gb|EDO48182.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 35/247 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGL-TRSFHHG------KIYCSLITARLV------- 450
+D F D +FL+H H DH QGL + +F +I+CS T L+
Sbjct: 16 IDCFDNENLDSYAYFLSHCHRDHMQGLDSATFSDAIKSKKQRIFCSETTRNLLLCDASFS 75
Query: 451 ---NMKIGIPWDR-LQVLPLNQKTTIAG-IDVTCLEANHCPGSIIILFEPQNGKAVLHTG 505
GIP D+ V P +++T I VT A HC GS++ LFE G VL+TG
Sbjct: 76 HLEEYLTGIPLDQPFVVTPYDKETNKEEVITVTLFSAGHCVGSVMFLFEGLKGN-VLYTG 134
Query: 506 DFRFSE-EMASMSVL----QTCPIHTLILDTTYCNP-LYDFPKQ----EAVIQFVIEAIQ 555
DFR + + ++VL + I ++ +DTT+C P + P + +A+ + +
Sbjct: 135 DFRLATGDTKRITVLHCNGRVKDIRSVYIDTTFCLPKMMSIPSRKETNDAIFKVIDRWFS 194
Query: 556 AESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN 615
+ + +L Y G E + +A + KI+V+ + + + L + IQ FTT+
Sbjct: 195 QGAEHVVSLQCKSKY--GYEYMLKSIAIYYKIKIHVSDERLEMYRYL---SDMIQHFTTD 249
Query: 616 EHESHIH 622
++ IH
Sbjct: 250 ASKTRIH 256
>gi|409730231|ref|ZP_11271817.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halococcus hamelinensis 100A6]
gi|448723594|ref|ZP_21706111.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halococcus hamelinensis 100A6]
gi|445787430|gb|EMA38174.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halococcus hamelinensis 100A6]
Length = 335
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 43/297 (14%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
L+H H DH TR+ + CS +TARL N + R PL +TT +D
Sbjct: 35 LSHAHGDHL--YTRAPE--AVVCSDVTARLANAR------REDEGPLT-RTTHPRVD--Q 81
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDF----RFS-EEMASMSVLQTCPIHTLILDTTYC 534
+ A H PGS + + +G L+TGDF RF + + +V + LI +TTY
Sbjct: 82 VPAGHVPGSRATIVDDPDGTTYLYTGDFSPRSRFVLDGFDAAAVADEYDVDVLITETTYG 141
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNA 593
P Y F Q+ + +++ + P LF YT+G+ + L L V R R++++V
Sbjct: 142 EPKYVFDDQDVLEARIVDWLDETHETPVLLF---GYTLGRAQELELLVGRSDRERLFVTD 198
Query: 594 AKFRVLKCL------DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
A R+ + DF E + TT + ++P T RL + + +
Sbjct: 199 ATARLNAIIEDACDVDFGAERYEEATTLGAGDAL-LLPAQT----NRLSFVDSIAESTGA 253
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
L FS GW + K R T + S+H F+EL + V+ + PE +
Sbjct: 254 LKAGFS--GWAIEESFKY---RGSYDETFV-----LSDHSDFSELVDTVETLEPERV 300
>gi|223938585|ref|ZP_03630476.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
gi|223892704|gb|EEF59174.1| DNA ligase I, ATP-dependent Dnl1 [bacterium Ellin514]
Length = 927
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 129/297 (43%), Gaps = 42/297 (14%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI----AG 474
F++H H DH + H ++ S T++ + +IG +L Q T G
Sbjct: 35 FISHAHSDH------TAPHREVILSEPTSKFMFARIGGTRQE-HILKFGQPATYEYNGTG 87
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
+T + A H GS + L E + G+++L+TGDF+ S + + P LI++TT+
Sbjct: 88 YQITLVPAGHIFGSAMSLVEAE-GQSLLYTGDFKLRPSR-SAELCEPRPADILIMETTFG 145
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
P Y FP + V+Q VI Q N +T L G Y++GK + L I ++AA
Sbjct: 146 RPSYQFPPTDEVMQGVIRFCQQAIDNDETPVLYG-YSLGKSQELLRSLGQAGLPIMLHAA 204
Query: 595 KFR---VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA 651
+ + K + D + + + + P +A L+ + R +++
Sbjct: 205 VHKLTEIYKNFGQTFPDYELYDAATAHGKVLICPPH-IAGTAMLRKLGKT---RTAIL-- 258
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEFVKFVSPEHI 704
TGW PG R+ RY+ P S+H F +L E VK V+P+ +
Sbjct: 259 ---TGWAV------DPGCRY------RYQCDAAFPISDHADFPDLIEMVKRVNPKKV 300
>gi|320100463|ref|YP_004176055.1| RNA procession exonuclease-like protein [Desulfurococcus mucosus
DSM 2162]
gi|319752815|gb|ADV64573.1| RNA procession exonuclease-like protein [Desulfurococcus mucosus
DSM 2162]
Length = 359
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 132/305 (43%), Gaps = 36/305 (11%)
Query: 420 LTHFHMDHYQGLTRSFHHGK-IYCSLITARLVNM--KIG---IPWDRLQVLP--LNQKTT 471
+TH H+DH +GL S K I + +T LV +G +P+ RL+ P LN+ +
Sbjct: 41 VTHAHIDHLKGLEESIRFSKTIVGTAVTLDLVEALNYVGRDLLPYYRLKRKPIGLNECMS 100
Query: 472 IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDT 531
I G + L A+H PGS + E G + +TGDF+ E M L L+++
Sbjct: 101 IEGDRMCLLPASHIPGSAQVYVE-HEGFKLGYTGDFKLGEGTVVMKGLD-----ALVIEA 154
Query: 532 TYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
TY NP + P ++ V + + ++ + +++ G + +E + + R + +
Sbjct: 155 TYGNPKHRRPFKDVVPEMLAYLVEEGLARFRRVYIYGYHGKLQEAMLILRERGVEAPFVL 214
Query: 592 NAAKFRVLKCLDFSKEDIQWFTTNEHESHIH----VMPMWTLASFKRLKHMSNQYAGRFS 647
F + L+ I + + E S + V A ++RL G
Sbjct: 215 PRKIFNATRLLEKHGFKIGNYVSEETGSSMGEGVVVFKHMNTAEYRRLD------GGSLH 268
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
+++ +GW F++ P RR T Y + S+H F +L ++V+ P ++
Sbjct: 269 IVL----SGWEFNE-----PFRRVDDYT---YLIALSDHADFDDLVKYVEAGDPGLVVVD 316
Query: 708 VNNDG 712
+ DG
Sbjct: 317 ASRDG 321
>gi|310800610|gb|EFQ35503.1| artemis protein [Glomerella graminicola M1.001]
Length = 629
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 111/236 (47%), Gaps = 41/236 (17%)
Query: 403 FRVDAFKYLRGDCSHW--FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV---------- 450
R+D F+ G FL+H H DH GL + +YCS T ++
Sbjct: 14 IRIDFFRSHAGRLPPLACFLSHIHSDHLAGL-ETLRSPFVYCSAATREMLLRLERYPCRL 72
Query: 451 NMKIGIPWDRLQVLP----------LNQKTTI-----AGIDVTCLEANHCPGSIIILFEP 495
N GI R+Q L TT+ I VT +ANHCPG+++ L E
Sbjct: 73 NYAKGILEARVQTYKHLKNLLKPLPLETTTTLELAPGIHIQVTLFDANHCPGAVMFLIED 132
Query: 496 QNGKAVLHTGDFR----FSEEMA-SMSVLQ-TCPIHTL---ILDTTYCNPLYDFPKQEAV 546
N +A+L+TGD R F +A + +V++ T + TL LDT++ + K E +
Sbjct: 133 SN-RAILYTGDIRSEPWFVNSIARNPAVIEYTSGLKTLDKIYLDTSFIRDVPFQTKAEGI 191
Query: 547 IQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ + + S+ T+F I ++T G E++++ +++ L+ +I+V+ K R+ L
Sbjct: 192 AELL---RKVASYPTDTIFHIQAWTYGYEQVWIALSKALKSRIHVDDYKMRMFSSL 244
>gi|453086518|gb|EMF14560.1| hypothetical protein SEPMUDRAFT_63032 [Mycosphaerella populorum
SO2202]
Length = 648
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 46/226 (20%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDRLQV----- 463
FL+H H DH QGL S I+C+ T ++ N GI R Q
Sbjct: 34 FLSHVHSDHLQGL-ESCRGPFIWCTTATREILLRLEKYPHRMNFATGILESRQQTYKHLR 92
Query: 464 -----LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
+PL T I I VT L+ANHC G+ + L E +GKA+L+TGD R
Sbjct: 93 KLLKPIPLETPTDIELVPGRSIRVTLLDANHCVGACMFLIE-GDGKAILYTGDIRAEPWW 151
Query: 514 ASMSV--------------LQTCPIHTLILDTTYCNP---LYDFPKQEAVIQFVIEAIQA 556
+ + L + T+ LDTT+ N FP + I +++ +
Sbjct: 152 VNALIRNPVMLPYACNGKALPQKQLDTIYLDTTFANKGDRYRHFPTKAEGIDELLQKVA- 210
Query: 557 ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ +T F I ++T G E ++ V+ LR +I+V+ ++ + K L
Sbjct: 211 -QYPRETEFYIDAWTFGYEDVWQAVSVFLRSQIHVDDYRYGLYKSL 255
>gi|409042569|gb|EKM52053.1| hypothetical protein PHACADRAFT_54509, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 589
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 138/359 (38%), Gaps = 75/359 (20%)
Query: 419 FLTHFHMDHYQGLT-RSFHHGKIYCSLITARLV-------------------------NM 452
L+H H DH QGL+ RSF H +YCS ++ ++
Sbjct: 35 LLSHTHTDHIQGLSARSFGH-TVYCSQDAKEMLLRHEVLAERQLREKDVRAENIRTFKHL 93
Query: 453 KI-------GIPW-----DRLQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEP 495
KI G+ + D L+ LPLN T + +T ++ANHCPG+++ L +
Sbjct: 94 KIKPLTHDDGMVFYNGSRDLLKPLPLNTPTRCELSNGNHVTITLIDANHCPGAVMFLIQG 153
Query: 496 QNGKAVLHTGDFRFSEEMASMSVLQTCP------------------------IHTLILDT 531
G ++L+TGDFR E + L+ P + + LDT
Sbjct: 154 SLG-SILYTGDFR--AEPWYLDSLKKNPFLEKYIATWDPHISNAFPETVGETLEAIYLDT 210
Query: 532 TYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
P ++ ++ ++ F T F I +T G E ++ VA+ R I+V
Sbjct: 211 ACMLSTKLIPSKDEATSGLVSLMKL--FPESTRFFINGWTWGYEDIYKVVAKAFRTNIHV 268
Query: 592 NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLAS-FKRLKHMSNQYAGRFSLIV 650
+ K V LD T +E + H + S K ++ +G + V
Sbjct: 269 DRYKHTVYSHLDREPFLRSIITRDERATRFHACERFDRCSEVKAEGQDTHTSSGNHVVYV 328
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQG-TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
G T + + R Q+G T+ V S H EL+ FV P+ IIP+
Sbjct: 329 NPVTMGATDWQAYIRETEERLQKGETVNHLLVALSRHSPLPELQSFVSLFRPKRIIPNT 387
>gi|356570279|ref|XP_003553317.1| PREDICTED: LOW QUALITY PROTEIN: DNA cross-link repair protein
SNM1-like [Glycine max]
Length = 324
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 348 GSITNVKKVSTPTNGQS---GSRKSFSGSDRKKHAAKDQSKGRKHKDIPTWCCVPGTPFR 404
G ++ +K+ P N S + K F + + K R + P + +PGT
Sbjct: 119 GGGSSERKIVKPENCGSILHHTGKEFENTKSSRKRKGSGGKNRVTRSCPFYXKMPGTTLI 178
Query: 405 VDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
VDAF Y + G CS +FLTHFH DHY GL+ + HG IYC +T +LV M G
Sbjct: 179 VDAFSYGCVEG-CSAYFLTHFHCDHYNGLSMKWSHGPIYCYPLTGQLVQMYKG 230
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 10/74 (13%)
Query: 642 YAGRFSLIVAFSPTGWTFSKGKK------KSPGRRWQQGTIIRYEVPYSEHCSFTELKEF 695
Y G+F+ I+AF PTGWTFS+ K +R I Y VPYSEH SFTEL++F
Sbjct: 235 YKGQFTAILAFRPTGWTFSERISNDLELIKPVSKR----NITIYGVPYSEHSSFTELRDF 290
Query: 696 VKFVSPEHIIPSVN 709
V+F+ P+ IIP+VN
Sbjct: 291 VQFLKPDKIIPTVN 304
>gi|336466543|gb|EGO54708.1| hypothetical protein NEUTE1DRAFT_124903 [Neurospora tetrasperma
FGSC 2508]
Length = 578
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 77/137 (56%), Gaps = 13/137 (9%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR-----FSEEMASMSVLQTC----PIH 525
I VT L+ANHCPG+++ LFE Q GKA L+TGD R + S S++Q +
Sbjct: 87 IQVTLLDANHCPGAVMFLFEGQ-GKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLKTLD 145
Query: 526 TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 585
T+ LDT++ + +FP + I +++ I + P T+F ++T G E +++ +++ L
Sbjct: 146 TIYLDTSFIEDI-EFPTKAQGISELLDKIS--RYPPNTIFHFQAWTYGYEDVWVALSKAL 202
Query: 586 RKKIYVNAAKFRVLKCL 602
+++V+ K + + L
Sbjct: 203 ESRVHVDEYKMGIYQSL 219
>gi|46121907|ref|XP_385507.1| hypothetical protein FG05331.1 [Gibberella zeae PH-1]
Length = 600
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 99/211 (46%), Gaps = 45/211 (21%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDR----------LQVLPLNQ 468
FL+H H DH GL + + L+N G+ R L+ LPL
Sbjct: 24 FLSHVHSDHLAGLES-----------LRSPLINYGKGVLEARQQTFKHLSKVLRSLPLET 72
Query: 469 KTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP 523
T+I I VT +ANHCPG+++ L E +GKA+L+TGD R E ++ ++ P
Sbjct: 73 PTSIELCPGREIQVTLFDANHCPGAVMFLVE-GDGKAILYTGDIR--SEPWFVNAIERNP 129
Query: 524 -----------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK-TLFLIGSYT 571
+ + LDT++ D P E Q + E ++ S P T+F ++T
Sbjct: 130 NLIEYTSGLKTLDKIYLDTSFTE---DVPF-ETKAQGITELLKKISKYPNDTVFHFQAWT 185
Query: 572 IGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
G E +++ +++ L+ KI+V+ K R+ L
Sbjct: 186 YGYEDVWIALSKALKSKIHVDDYKLRIYGSL 216
>gi|68061819|ref|XP_672911.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56490363|emb|CAI01693.1| conserved hypothetical protein [Plasmodium berghei]
Length = 322
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 79/158 (50%), Gaps = 22/158 (13%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
KTLF+ G+Y +GKE+++L V+ KIY N K + ++K+ + T N+ E+
Sbjct: 147 KTLFMFGTYNLGKEKVYLSVSEACNMKIYFRNPKKKIIFNSYIYNKDMLNRITGNKLEAE 206
Query: 621 IHVMPMWTLASFKRLK----------HMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRR 670
IH++ + F +++ M +++ + +I PTGW
Sbjct: 207 IHIVDINYSYIFPKIEKNKLRSLIDAEMEDEFDSFYYII----PTGWV-------KNYYF 255
Query: 671 WQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+++ + + +PYSEH + ELK+FVK + P I P+V
Sbjct: 256 YEKNNMSVFLIPYSEHSNLDELKDFVKSIKPCSICPTV 293
>gi|448419012|ref|ZP_21580168.1| mRNA 3'-end processing factor [Halosarcina pallida JCM 14848]
gi|445675998|gb|ELZ28525.1| mRNA 3'-end processing factor [Halosarcina pallida JCM 14848]
Length = 330
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 121/303 (39%), Gaps = 65/303 (21%)
Query: 420 LTHFHMDHY-QGLTRSFHHGKIYCSLITARLVNMKIGIPW-----DRLQVLPLNQKTTIA 473
++H H DH+ +G CS +TA L + + IP DR+++LP
Sbjct: 41 VSHAHGDHFPEG------EATAVCSPLTADLASARREIPLHATTDDRIELLP-------- 86
Query: 474 GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF----RFSEEMASMSVLQTCPIHTLIL 529
A H GS L +G L+TGD RF + + LI
Sbjct: 87 --------AGHVAGSTAALVTDPDGTRYLYTGDVCTRSRFY-----LDGFEPPDADVLIT 133
Query: 530 DTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKK 588
+TTY P Y FP E V ++ ++ E+ P LF Y +G+ ++L L R++
Sbjct: 134 ETTYGEPEYVFPDHETVAADIVSWLR-ETDEPVILF---GYALGRAQKLQLLAEEAGRER 189
Query: 589 IYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIH-------VMPMWTLASFKRLKHMSNQ 641
++ A FRV + S D+ F + +E+ V+PM T R+ + N
Sbjct: 190 LFTTDAVFRVNDVV-ASHLDVS-FGADRYEAETELGPGDALVLPMTT----ARIDWIRNL 243
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
+L FS GW ++ P S+HC F EL++ V V P
Sbjct: 244 AEETGALKAGFS--GWAVDDA--------FEFRGEFDETFPLSDHCDFAELRDLVDAVDP 293
Query: 702 EHI 704
+ +
Sbjct: 294 DRV 296
>gi|390937932|ref|YP_006401670.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Desulfurococcus fermentans DSM
16532]
gi|390191039|gb|AFL66095.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Desulfurococcus fermentans DSM
16532]
Length = 362
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 139/313 (44%), Gaps = 48/313 (15%)
Query: 420 LTHFHMDHYQGLTRSFHHGK-IYCSLITARLVNM-----KIGIPWDRLQVLPL--NQKTT 471
+TH H+DH GL S + K I + IT L+ K +P+ RL+ PL N+
Sbjct: 41 ITHAHVDHLGGLEESIKYSKMIIATSITLDLIESLNYVDKYLLPYYRLKKKPLKYNECLV 100
Query: 472 IAGIDVTCL-EANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILD 530
I + CL +A+H PG+ + E + + + +TGDF+ + M L L+++
Sbjct: 101 IDDNETLCLFQASHIPGAAQVYVEYRELR-LGYTGDFKLDGKTQVMKDLDV-----LVME 154
Query: 531 TTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF------LEVARV 584
+TY NP Y P ++ V + ++ + K +++ G + +E + +E +
Sbjct: 155 STYGNPNYRRPFKDEVPELFASLVEEGLYRYKRVYVYGYHGKVQEAMIILREKGIEAPFI 214
Query: 585 LRKKIYVNAAKFRVL-----KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS 639
L KIY + RVL K ++ E+ N E + + +A ++RL
Sbjct: 215 LPPKIYHST---RVLEKHGIKIGNYMHEEDMLRGLNPGEKAV-IFKHMNVAEYRRLD--- 267
Query: 640 NQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
G IV +GW F+K P RR T Y V S+H F +L E+V+
Sbjct: 268 ----GSALHIVL---SGWEFNK-----PFRRIDDYT---YLVALSDHADFDDLVEYVRRG 312
Query: 700 SPEHIIPSVNNDG 712
P+ ++ + +G
Sbjct: 313 EPKLVVIDASREG 325
>gi|359416235|ref|ZP_09208586.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Candidatus Haloredivivus sp. G17]
gi|358033391|gb|EHK01945.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Candidatus Haloredivivus sp. G17]
Length = 320
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 140/316 (44%), Gaps = 54/316 (17%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDH-YQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G F D+ K L GD + +H HMDH +Q GKI S +T RL+ ++
Sbjct: 13 GEKFVADSRKAL-GDVN--IASHAHMDHAFQA------EGKIVASDLTRRLLESRL---- 59
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
DR L LN+ DV +++ H GS L E +GK +L+TGD + + A +
Sbjct: 60 DR--ELNLNEHP-----DVKLIDSGHILGSTAALIE-SDGKRILYTGDVS-TRDRAYIEG 110
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
+ LI ++TY P Y P QE I+ I+A E+ P FL G Y++GK +
Sbjct: 111 FEPVNADILISESTYGIPAYSLPPQEQ-IENNIKAWIEETEAP---FLFG-YSLGKAQKI 165
Query: 579 LEVA-RVLRKKIYVNAAKFRVLKCL----DFSKEDIQWFTTN---EHESHIHVMPMWTLA 630
+A +V K + + A ++ K + D S + + + E+ + I + P
Sbjct: 166 QWLAHQVTDKPLIAHGAVMKMNKVVEEHTDLSFDALPYGENKDMLENGAGIFIGPTRFAK 225
Query: 631 S--FKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCS 688
S L SN FS GW ++ K G + Q P+S+HC
Sbjct: 226 SDALNELVKASNGVKAGFS--------GWGMTEKYKYRGG--YDQ------VFPFSDHCG 269
Query: 689 FTELKEFVKFVSPEHI 704
F +L E V+ V+PE +
Sbjct: 270 FDDLVEMVRAVNPEKV 285
>gi|170579436|ref|XP_001894830.1| hypothetical protein Bm1_16865 [Brugia malayi]
gi|158598434|gb|EDP36325.1| hypothetical protein Bm1_16865 [Brugia malayi]
Length = 524
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 68/309 (22%)
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM-------KIGIPWDRLQVLPL 466
D + FL+ H + L + +I CS ITA+L+++ KI W ++ L L
Sbjct: 26 DVKYCFLSSAHSRQCRKLVSEWQCNRICCSPITAKLLSVISTGRKYKISDKW--IRPLDL 83
Query: 467 NQKTTIAGIDVTCLEANHCPGSIIILFEPQNG---KAVLHTGDFR----FSEEMASMSVL 519
N + V ++ANH PGS++++ E ++ + +L+TG FR F + +S L
Sbjct: 84 NVWHKMERFRVMLVDANHAPGSVMLIIEREHHSTLRRILYTGFFRADAKFYRNVIGLSAL 143
Query: 520 QTCPIHTLILDTTYCNPL-YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
Q + +D++Y + +FP +++ + E ++ +N + I IG E L
Sbjct: 144 QEKKFDLICIDSSYVDFTDGEFPSRQSSAKKAAELLRKLKYNGVSGVAIPVPLIGCESLL 203
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
+ ++R L KI+++ +F + L +F+ + +++I
Sbjct: 204 VNISRQLECKIWLHPERFEIAGILGIK----DYFSETKGDTYI----------------- 242
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
WT S+G ++ + + YS+HCS EL+ F+
Sbjct: 243 ------------------WTCSQGSER------------EHLIRYSDHCSSMELRSFLSL 272
Query: 699 VSPEHIIPS 707
+S II +
Sbjct: 273 LSFARIIGT 281
>gi|412993060|emb|CCO16593.1| predicted protein [Bathycoccus prasinos]
Length = 1523
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 18/116 (15%)
Query: 418 WFLTHFHMDHYQGLTRSF----HHGKIYCSLITARLVNMKIGIPWDRLQVLPL------- 466
+FLTH H DH +GL ++G+IYC+ IT L+ + +++VL
Sbjct: 67 YFLTHMHQDHLRGLREDTFENDNNGRIYCTEITNILLVKRFPRLESKVKVLEFDSVEVVE 126
Query: 467 ------NQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
N K +V CL+A HCPGS + +FE GK VLHTGDFR + S+
Sbjct: 127 VVSNKKNTKEEDLRFNVYCLDAGHCPGSAMFVFEGTFGK-VLHTGDFRREDWSGSL 181
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 37/217 (17%)
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAI-QAESFNPKTLFLIGSYTIGKERLF 578
+T + L LD TY NP YD P + ++ +++ + + E P L L ++GKE +
Sbjct: 258 KTQAVDVLYLDNTYNNPEYDHPPRAVALERIVKLVTEIEPERPVILLL---DSLGKEDIV 314
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWT---------- 628
+ +++ + K+Y++ ++ L F KE + + + V+P
Sbjct: 315 IALSQATKSKVYLHKDRYNDWLKLGFEKEYVCNSLGENESTRVRVLPKAMGRHKENVCGP 374
Query: 629 -LASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT------------ 675
+A K K + SPTGW + + + + T
Sbjct: 375 LVAGLKNFKEWG---------PLVISPTGWARVTEQMREEDEKQEMDTERREKMTNEEKT 425
Query: 676 -IIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNND 711
+R VPYS H S++EL+ FVK + P II + +D
Sbjct: 426 DWVRRSVPYSLHSSYSELETFVKRIQPRKIIGNTRDD 462
>gi|449302733|gb|EMC98741.1| hypothetical protein BAUCODRAFT_379459 [Baudoinia compniacensis
UAMH 10762]
Length = 833
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 48/233 (20%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH +GL SF IYCS T ++ N GI R
Sbjct: 28 FLSHVHSDHLRGL-ESFRSPFIYCSPATRDILLRLEKYPHRMNFAKGILESRKQTYKHLA 86
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM 513
L+ +PL TTI I VT ANHC G++ L E +GKA+ ++GD R
Sbjct: 87 KLLKPIPLETPTTIELTPGNSIRVTLFNANHCVGAVCFLIE-GSGKAIFYSGDVRAENWW 145
Query: 514 ASMSVLQ-------TCPIHT---------LILDTTYC---NPLYDFPKQEAVIQFVIEAI 554
++ + P H + LDTT+ P FP + + ++ A+
Sbjct: 146 VNLLIRNPFIIPYVPSPTHGGPPLKQLDCIYLDTTFAVKDEPYKQFPSKAEGLSELLLAV 205
Query: 555 QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
+ T++ ++T G E ++L ++ L +++V+ ++ + + + S+E
Sbjct: 206 --SKYPKDTVYYFDAWTFGYEEVWLALSSFLDSQVHVDDYRYGLYRAVANSQE 256
>gi|321471014|gb|EFX81988.1| hypothetical protein DAPPUDRAFT_49525 [Daphnia pulex]
Length = 288
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 109/245 (44%), Gaps = 49/245 (20%)
Query: 419 FLTHFHMDHYQGL-TRSFHHGK-------IYCSLITARL-----VNMKIGIPWDRLQVLP 465
FL+H H DH +GL + +H IYCS T ++ + K+ P+ +VL
Sbjct: 34 FLSHCHADHMKGLDSHDLYHTVRTKPGLFIYCSGTTKKILTDWPIYSKLA-PY--FKVLE 90
Query: 466 LNQKTTI--------------AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
LN I G VT + + HCPGS++ L+E G VL+TGDFR ++
Sbjct: 91 LNHTVKIDFPGGYCSDDNSSKIGFCVTSIPSGHCPGSVMFLYEGPFG-TVLYTGDFRIAK 149
Query: 512 -EMASMSVLQTCP---------IHTLILDTTYC-NPLYDFPKQEAVIQFVIEAIQ---AE 557
+ + P I + LD T+C + FP ++ + I+ + A+
Sbjct: 150 GDSRKFQAFMSNPSRPEYGLKTIDHVYLDCTFCTDSAKTFPSRQTSVDVTIDLVSSWIAK 209
Query: 558 SFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEH 617
S K LF + G E LF+EV R L+ +++ + K ++ L DI+ + +
Sbjct: 210 SPEHKVLFTLAGRGFGAEFLFVEVYRKLKLQVHTSDFKHQIYSNL----SDIKKAISRQR 265
Query: 618 ESHIH 622
+ IH
Sbjct: 266 TTSIH 270
>gi|345565478|gb|EGX48427.1| hypothetical protein AOL_s00080g56 [Arthrobotrys oligospora ATCC
24927]
Length = 774
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 52/229 (22%)
Query: 419 FLTHFHMDHYQGLT-RSFHHGKIYCSLITARLVNMKIGIPWDR----------------- 460
FL+H H DH GL +S+ IYCS T +L+ +K+ R
Sbjct: 33 FLSHIHSDHLTGLAGKSYRAPFIYCSAATKQLL-LKLERRLHRFNYAKKLVESHEYSYLH 91
Query: 461 -------LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
L+ LPL T I I VT +ANHCPGS + L E + GKA+L+TGD R
Sbjct: 92 YANRDRILRELPLETPTDIELCPGYTIRVTLFDANHCPGSTMFLVEGR-GKAILYTGDIR 150
Query: 509 FSEEMASMSVLQTCPI-----------HTLILDTTY----CNPLYDFPKQEAVIQFVIEA 553
E + L+ PI L LDTT+ + L K + + +
Sbjct: 151 --AEPWWLEKLKRNPILLPYFRGIKTLDCLYLDTTHASFEASHLTFSSKADGIADLL--- 205
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
Q + P+T+F + ++T+G E ++ +A +I+++ + + L
Sbjct: 206 TQISKYPPETVFHLNTWTLGYEDAWVALASYFNTQIHLDDYRLGLFNAL 254
>gi|241948347|ref|XP_002416896.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223640234|emb|CAX44483.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 860
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 89/232 (38%), Gaps = 90/232 (38%)
Query: 405 VDAFKYLRGD-CSHWFLTHFHMDHYQGLTRSFHHGK------------------------ 439
VDAF + D + +FLTHFH DHY G+++ + + +
Sbjct: 235 VDAFSFAPHDTINQYFLTHFHADHYGGISKKWPYERVFGNEDIYNESNLNLNLNFNDDKI 294
Query: 440 ----IYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIA---------------------- 473
IYC+ IT +L+ ++ I ++ L LN K I
Sbjct: 295 YKKIIYCTNITGKLLTLRYSIDSRFIKQLELNIKYKIKNYIYNDSIKKDFGYKTNNNNNN 354
Query: 474 ----------GIDVTCLEANHCPGSIIILFEP----QNGKAVLHTGDFRFSEEMASMSVL 519
G+ VT + ANHCPG+ + FE + +LH GDFR + E+ +L
Sbjct: 355 NNNNNIDMTPGLYVTPIMANHCPGAAMFFFESIGIDKKIYRILHCGDFRVNMEILQHPIL 414
Query: 520 Q-------------------------TCPIHTLILDTTYCNPLYDFPKQEAV 546
+ + I + LDTTY +P ++ PKQE V
Sbjct: 415 KPFSLNNHNNDSNNNNGKNNNGKNDLSLYIDKVYLDTTYMSPKHNLPKQELV 466
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 22/117 (18%)
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAA-----KFRVLKCLDFSKEDIQWFTTNEHESH 620
+IG+Y IGKE+L + +++ L IY++ KF + K F + +Q T + E
Sbjct: 553 VIGTYVIGKEKLAISISKRLNCLIYLSNIGSRKDKFEIFKT--FKNDYLQSIITIDKEFG 610
Query: 621 -------------IHVMPMWTLASFKRL-KHMS-NQYAGRFSLIVAFSPTGWTFSKG 662
IH++PM +A+ + L K+ + N+Y F + PTGW+++K
Sbjct: 611 NTTTTSNSGDDCVIHLVPMTIVANNEELSKYFNHNKYYQFFERCIGICPTGWSYNKN 667
>gi|70943836|ref|XP_741916.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520599|emb|CAH81158.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 540
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYV-NAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
KTLF+ G+Y +GKE+++L V+ KI+ N K + +K+ + T N+ E+
Sbjct: 302 KTLFMFGTYNLGKEKVYLSVSEACNMKIHFRNPKKKTIFNSYICNKDMLNRITDNKLEAE 361
Query: 621 IHVMPMWTLASFKRLKH------MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQG 674
IH++ + F +++ + ++ F PTGW +++
Sbjct: 362 IHIVDINYSYIFPKIEKNKLRSLIDSEMEDEFDSFYYIMPTGWV-------KNYYFYEKN 414
Query: 675 TIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAMVSLL 723
+ + +PYSEH + EL++FVK + P I P+V ++ ++ N M+S+
Sbjct: 415 NMSVFLIPYSEHSNLDELRDFVKSIKPCSICPTVFSNIKE-KNKMLSIF 462
>gi|255940940|ref|XP_002561239.1| Pc16g09210 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585862|emb|CAP93591.1| Pc16g09210 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 677
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 20/159 (12%)
Query: 461 LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
L+ +PLN T I I VT +ANHC G+++ L E +GKA+++TGD R S
Sbjct: 45 LRPIPLNTPTEIELTPRRRIKVTLFDANHCTGAVMFLIE-GDGKAIIYTGDIRAETWWVS 103
Query: 516 MSV---------LQTCPIHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
V L + L LD+T+ NP +FP + + +++ IQA + T
Sbjct: 104 SLVRHPVLIPYTLGQKRLDKLYLDSTFASKTNPFREFPSKAEGLSELLQKIQA--YPDDT 161
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 162 VFYFRAWTFGYEDVWIALSAALNTKIHVDRYQMGLYRSL 200
>gi|448103590|ref|XP_004200073.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
gi|359381495|emb|CCE81954.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
Length = 714
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK---------IGIPWDRLQVLPLNQ 468
+ LTH H DH GL + G +YCS IT +L+ +K I I ++R V+ L
Sbjct: 25 YILTHSHTDHLLGLRKRSFDGLVYCSDITKKLIEIKRPCFASNYLIPIQYNRRYVINL-- 82
Query: 469 KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ---- 520
+ + +T + + HCPGS + L E + VL TGD R + EE+ + S L+
Sbjct: 83 --STGRLSLTMIPSYHCPGSSMFLLENSRHR-VLITGDIRGEDWWLEELKTNSFLRPYIS 139
Query: 521 -TCPIHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESF-NPKTLFLIGSYTIGKE 575
T + + LDTT+ P D P I ++E ++ +P+ F G E
Sbjct: 140 GTLRLDNIYLDTTFSYRGEPYIDIPSNYDGINLLVEQLKNYPLDDPEIQFYFLDSVTGIE 199
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTT 614
++ + + I++ LK L E+ +W +T
Sbjct: 200 EVWAFIVKEFGGSIHLKKVIEERLKVL---SENEKWRST 235
>gi|308476884|ref|XP_003100657.1| hypothetical protein CRE_20424 [Caenorhabditis remanei]
gi|308264675|gb|EFP08628.1| hypothetical protein CRE_20424 [Caenorhabditis remanei]
Length = 620
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 97/205 (47%), Gaps = 19/205 (9%)
Query: 415 CSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI-----PWDRLQVLPLNQK 469
CS+ FLTH H ++ + L + ++CS T+ ++ +GI P + + + LN
Sbjct: 224 CSYHFLTHIHPEYLRDLDLTADR-TVFCSETTSDILPEIMGIDSKNVPANSIFPMRLNHP 282
Query: 470 TTIAGIDVTCLEANHCPGSIIILFEPQ-----NGKAVLHTGDFR----FSEEMAS--MSV 518
+ T +++NHCPGS++ILFE + G VL TGDFR F E+ S
Sbjct: 283 YSFEEFQATMIDSNHCPGSVMILFEGELIQKHAGGPVLCTGDFRADKTFLSELKSGPCRF 342
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
L + + +D TY + + + + +I+ I ES P +I + +G+E L
Sbjct: 343 LSELKLARIYMDNTYFSLDQNILQLDHARDLLIQNI--ESRYPDKNIIIPLHRLGRESLI 400
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLD 603
+ + L + I + + + + L+
Sbjct: 401 ESIVQALNEPILMFKERLEIARILN 425
>gi|425772924|gb|EKV11304.1| DNA repair protein, putative [Penicillium digitatum PHI26]
gi|425782106|gb|EKV20035.1| DNA repair protein, putative [Penicillium digitatum Pd1]
Length = 666
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 461 LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
L+ +PLN T I I VT +ANHC G+++ L E +GKA+++TGD R S
Sbjct: 35 LRPIPLNTPTKIELTPRRCIKVTLFDANHCTGAVMFLIE-GDGKAIIYTGDIRAETWWVS 93
Query: 516 MSV---------LQTCPIHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESFNPKT 563
V L + L LD+T+ NP +FP + + +++ +QA + T
Sbjct: 94 SLVRHPVLIPYTLGPKRLDKLYLDSTFASKTNPFREFPSKAEGLSELLQKVQA--YPDDT 151
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F + ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 152 VFYLRAWTFGYEDVWIALSAALNTKIHVDRYQMGLYRSL 190
>gi|354548244|emb|CCE44981.1| hypothetical protein CPAR2_407840 [Candida parapsilosis]
Length = 562
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 388 KHKDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITA 447
K ++IP C VD F Y +G+ +FLTH H DH GL + G+++CS +T
Sbjct: 10 KIREIPGVC--------VDNFSY-KGEV--FFLTHCHSDHLNGLLENSFCGRVFCSQLTK 58
Query: 448 RLVNMKIGIPWDRLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKA 500
++ + D L+ L P +T + + VT L+ HCPGS + LFE NG +
Sbjct: 59 DIIALDHRYN-DILRFLIVKEYNEPFEVQTFCSSMTVTMLKTYHCPGSSMFLFECTNGVS 117
Query: 501 VLHTGDFRFSEEMASMSVLQTCPIHTLI-----LDTTYCNPLYDF 540
L TGD R +E+ S++Q I I LD Y + + +
Sbjct: 118 CLATGDIR-AEKWWVSSLIQNRYIFPYITGLKTLDQIYLDTTFSY 161
>gi|358054507|dbj|GAA99433.1| hypothetical protein E5Q_06132 [Mixia osmundae IAM 14324]
Length = 811
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 107/269 (39%), Gaps = 82/269 (30%)
Query: 406 DAFKYLRGD--------CSHWFLTHFHMDHYQGLTR------SFHHGKIYCSLITARLV- 450
DA KY+R D S L+H H DH GL S G+I CS IT L+
Sbjct: 228 DAIKYVRADRFTTELRPTSLHLLSHVHSDHTVGLANTTGNVSSMFQGRIVCSAITKDLLL 287
Query: 451 -------------------------------NMKIGIPWDRLQVLPLNQKTTIA----GI 475
N++ G P D L+ + L+++ +
Sbjct: 288 HLMPEEWRILTAEGYAGGEKVQRYPFSHLRRNIR-GRPHDCLRPIELDERHRFELHGHTV 346
Query: 476 DVTCLEANHCPGSIIILFEPQNGK--AVLHTGDFR----FSEEMASMSVLQT-------- 521
DVT ++ANHCPGS ++L E VL+TGD R + E + +L+
Sbjct: 347 DVTLIDANHCPGSTMMLIEQVEPSPVTVLYTGDIRAEPDYLETLREHPILREYALPSTSD 406
Query: 522 ----------CPIHTL---ILDTTY-CNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLI 567
P TL LDT C PKQEAV Q + + F +T+F +
Sbjct: 407 VKGKRRASPDSPRKTLDRIYLDTAASCCTAELLPKQEAVEQVLSHIAR---FPAETIFFL 463
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKF 596
++T G E L VA +I+V+A KF
Sbjct: 464 NAWTWGYELLVEAVAERFNTRIHVDAYKF 492
>gi|302770741|ref|XP_002968789.1| hypothetical protein SELMODRAFT_409901 [Selaginella moellendorffii]
gi|300163294|gb|EFJ29905.1| hypothetical protein SELMODRAFT_409901 [Selaginella moellendorffii]
Length = 186
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 65/123 (52%), Gaps = 15/123 (12%)
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMS--------VLQTCPIHTLILDT 531
L A+ C G L+ Q G VLHTGDFR++ + ++ + + L LD
Sbjct: 30 LSADWCRGP---LYCSQFG-CVLHTGDFRWNNDRCTLEERKEALREAIGGAQVDFLYLDN 85
Query: 532 TYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
T+CNPL+ FP + A VIE I+ +P+ +IG +GKE L L +A+ L K+++
Sbjct: 86 TFCNPLFSFPSRNAAATRVIELIRG---HPEKDIVIGIDNLGKEELLLSIAQALETKVHL 142
Query: 592 NAA 594
+ A
Sbjct: 143 SVA 145
>gi|426364044|ref|XP_004049132.1| PREDICTED: protein artemis [Gorilla gorilla gorilla]
Length = 682
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 139/336 (41%), Gaps = 52/336 (15%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKI--------YCSLITARLV--NMKI 454
+D F +FL+H H DH +GL ++ YCS +T L+ + K
Sbjct: 16 IDRFDRENLRARAYFLSHCHKDHMKGLRAPTLKRRLECSLKVYLYCSPVTKELLLTSPKY 75
Query: 455 GIPWDRLQVLPLNQKTTIAGID----------VTCLEANHCPGSIIILFEPQNGKAVLHT 504
R+ + + T I+ +D VT L A HCPGS++ P A
Sbjct: 76 RFWKKRIISIEIETPTQISLVDEASGEKEEIVVTLLPAGHCPGSVMN-SRPXXXXAQREA 134
Query: 505 GDFRFSEEMASMSVLQTCPIHTLILDTTYCNP-LYDFPKQEAVIQFVIEAIQAE-SFNP- 561
F SV + I ++ LDTT+C+P Y P +E + V+E +++ + +P
Sbjct: 135 ARMEFLH-----SVGRVKDIQSVYLDTTFCDPRFYQIPSREECLSGVLELVRSWITRSPY 189
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKEDIQWFTTNEHESH 620
++L G E LF ++ L +++VN FR + +I T + +
Sbjct: 190 HVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP-------EILHHLTTDRNTQ 242
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKKSPGRRWQQGTII 677
IH + + + R + I++ P+ F + +K+ I+
Sbjct: 243 IHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMWFGERSRKT-------NVIV 295
Query: 678 R-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 296 RTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 331
>gi|148675642|gb|EDL07589.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_d [Mus musculus]
Length = 415
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
IHTL LD T CNP P ++ Q +++ I+ P+ IG Y++GKE L ++A
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKIGLYSLGKESLLEQLAL 69
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYA 643
R + ++ + +++ L + D+ FT E IH + + H +
Sbjct: 70 EFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV------DHTEICHSAMLQW 119
Query: 644 GRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
+ +A PT K +SP +I Y VPYS+H S++EL+ FV + P
Sbjct: 120 NQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHSSYSELRAFVAALRPCQ 167
Query: 704 IIPSVNN 710
++P V+
Sbjct: 168 VVPIVHQ 174
>gi|448099778|ref|XP_004199220.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
gi|359380642|emb|CCE82883.1| Piso0_002639 [Millerozyma farinosa CBS 7064]
Length = 714
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 27/207 (13%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK---------IGIPWDRLQVLPLNQ 468
+ LTH H DH GL + G +YCS IT L+ +K I I ++R + L
Sbjct: 25 YLLTHSHTDHLLGLRKRSFDGLVYCSYITKELIEIKRPCFASKNLIPIQYNRCYDISL-- 82
Query: 469 KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ---- 520
+ + VT + + HCPGS + L E + VL TGD R + EE+ S + L+
Sbjct: 83 --STGCLYVTMISSYHCPGSSMFLLEDSRHR-VLITGDIRGEDWWLEELKSNTFLRPYIS 139
Query: 521 -TCPIHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESF-NPKTLFLIGSYTIGKE 575
+ + LDTT+ P D P I ++E +++ +P F G E
Sbjct: 140 GALRLDNIYLDTTFSYRGEPYIDIPSNYDGINLLVEQLRSYPLDDPDIQFYFLDSVTGLE 199
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKCL 602
++ +A+ I++ LK L
Sbjct: 200 EVWAYIAKEFGGSIHLKKDIEERLKVL 226
>gi|119189777|ref|XP_001245495.1| hypothetical protein CIMG_04936 [Coccidioides immitis RS]
Length = 704
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 85/159 (53%), Gaps = 20/159 (12%)
Query: 461 LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSE 511
L+ +PL+ T I + I VT ANHCPG+++ L E NGKA+L+TGD R + E
Sbjct: 22 LRPIPLHVPTEIELTPGSTIRVTLFNANHCPGAVMFLIE-GNGKAILYTGDVRAEPWWVE 80
Query: 512 EMASMSV-----LQTCPIHTLILDTTYC--NPLYD-FPKQEAVIQFVIEAIQAESFNPKT 563
+ + L C + + LDTT+ + +Y FP + I+ ++ ++A + T
Sbjct: 81 SLIRNPILIPYTLGDCRLDRIYLDTTFAIKSDIYSAFPSKAEGIKELLHKVKA--YPEDT 138
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F ++T G E +++ ++ L KI+V+ + ++ + L
Sbjct: 139 IFYFRNWTFGYEDVWIALSAALNTKIHVDQYQLKLYQSL 177
>gi|70778907|ref|NP_001020483.1| 5' exonuclease Apollo isoform b [Mus musculus]
gi|44890376|gb|AAH67017.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae) [Mus
musculus]
Length = 415
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 25/187 (13%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
IHTL LD T CNP P ++ Q +++ I+ P+ IG Y++GKE L ++A
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEATQQIVQLIRQ---FPQHNIKIGLYSLGKESLLEQLAL 69
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYA 643
R + ++ + +++ L + D+ FT E IH + + H +
Sbjct: 70 EFRTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV------DHTEICHSAMLQW 119
Query: 644 GRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
+ +A PT K +SP +I Y VPYS+H S++EL+ FV + P
Sbjct: 120 NQSHPTIAIFPTS-----RKVRSP-----HPSI--YTVPYSDHSSYSELRAFVAALRPCQ 167
Query: 704 IIPSVNN 710
++P V+
Sbjct: 168 VVPIVHQ 174
>gi|426196379|gb|EKV46307.1| hypothetical protein AGABI2DRAFT_222438 [Agaricus bisporus var.
bisporus H97]
Length = 866
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 44/264 (16%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ------TCPI 524
+ +T L+ANHCPG+++ L E G AVLHTGDFR F E ++ LQ T I
Sbjct: 134 VTITALDANHCPGAVMYLIEGSKG-AVLHTGDFRAEPWFLESLSRNPYLQPYLESSTGGI 192
Query: 525 HTLILDTTYCN------PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
LD Y + PL + P + +IE ++ F P F I ++T G E +
Sbjct: 193 LHQSLDCIYLDTACAFLPL-EIPSKNDATAGLIELMKL--FPPNVYFYINAWTWGYEDIL 249
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE-SHIHVMPMWTLASFKRLKH 637
V+ + KI+V+ K+++ + + S ++ T + + H F R H
Sbjct: 250 KAVSAAFQTKIHVDRYKYKIYQ--NISDPYMRLIVTRDPGCTRFH-----ACERFDRCDH 302
Query: 638 M--------SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE------VPY 683
+ N + ++ +P T + +Q I E VP
Sbjct: 303 VLVDNDDEFENSTSRLGKRVIYINPV--TMESASWDLYFQVVKQALIDGDEKINDLLVPL 360
Query: 684 SEHCSFTELKEFVKFVSPEHIIPS 707
S H + EL+ FV P+ IIP+
Sbjct: 361 SRHSTLPELRAFVGLFRPKRIIPN 384
>gi|409081145|gb|EKM81504.1| hypothetical protein AGABI1DRAFT_69756 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 866
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 111/264 (42%), Gaps = 44/264 (16%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ------TCPI 524
+ +T L+ANHCPG+++ L E G AVLHTGDFR F E ++ LQ T I
Sbjct: 134 VTITALDANHCPGAVMYLIEGSKG-AVLHTGDFRAEPWFLESLSRNPYLQPYLESSTGGI 192
Query: 525 HTLILDTTYCN------PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
LD Y + PL + P + +IE ++ F P F I ++T G E +
Sbjct: 193 LHQSLDCIYLDTACAFLPL-EIPSKNDATAGLIELMKL--FPPNVYFYINAWTWGYEDIL 249
Query: 579 LEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHE-SHIHVMPMWTLASFKRLKH 637
V+ + KI+V+ K+++ + + S ++ T + + H F R H
Sbjct: 250 KAVSAAFQTKIHVDRYKYKIYQ--NISDPYMRLIVTRDPGCTRFH-----ACERFDRCDH 302
Query: 638 M--------SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYE------VPY 683
+ N + ++ +P T + +Q I E VP
Sbjct: 303 VLVDNDDEFENSTSRLGKRVIYINPV--TMESASWDLYFQVVKQALIDGDEKINDLLVPL 360
Query: 684 SEHCSFTELKEFVKFVSPEHIIPS 707
S H + EL+ FV P+ IIP+
Sbjct: 361 SRHSTLPELRAFVGLFRPKRIIPN 384
>gi|119872485|ref|YP_930492.1| mRNA 3-end processing factor [Pyrobaculum islandicum DSM 4184]
gi|119673893|gb|ABL88149.1| putative mRNA 3-end processing factor [Pyrobaculum islandicum DSM
4184]
Length = 314
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 133/308 (43%), Gaps = 47/308 (15%)
Query: 401 TPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG-IPWD 459
T F VD ++ D +TH H DH ++R + + T + +++G +P
Sbjct: 16 TRFVVDPTGPIKRDVDFVLVTHGHSDH---ISRYVLRQLVVATQETFVAMYIRLGSLPTR 72
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
R+ V P + + G+ + LEA H GS++ L E + + VL TGDF + + + +
Sbjct: 73 RITVAP-GKFLELDGVHIAVLEAGHILGSVMYLVEIDDLQ-VLFTGDFNTTGTILTDAAE 130
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
L++D TY +P Y FP + V +++ ++ + + K I +Y +GK +
Sbjct: 131 PVDKPDILVMDATYGDPAYIFPNRAEVYNELLDVVERYTTSGKV--AIVAYPLGKAQ--- 185
Query: 580 EVARVL--RKKIYVNAAKF-RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLK 636
EVA++ R ++ A++ R L E ++ ++P
Sbjct: 186 EVAKLFGTRAGAHITVARYNRALGI------------PTGMEKNVVIVP----------- 222
Query: 637 HMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFV 696
+ + G F + V +GW + K+ +R G +P S+H F L EFV
Sbjct: 223 SLRSAPTGYFKVEV----SGWYAEETTKREAAKRGVYG------IPLSDHSDFPSLVEFV 272
Query: 697 KFVSPEHI 704
SP+ I
Sbjct: 273 TETSPKLI 280
>gi|254443838|ref|ZP_05057314.1| DNA ligase N terminal domain family [Verrucomicrobiae bacterium
DG1235]
gi|198258146|gb|EDY82454.1| DNA ligase N terminal domain family [Verrucomicrobiae bacterium
DG1235]
Length = 765
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 134/312 (42%), Gaps = 37/312 (11%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+P + +DA R + F++H H DH H +I CS TA+L+ +I P
Sbjct: 13 LPQLDWHLDA----RKPVARSFVSHAHFDHMG------KHEEILCSPPTAQLIRQRI--P 60
Query: 458 WDR-LQVLPLNQKTTIAGIDVTCL-EANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
DR + + + CL A H GS ++ E ++G++ L+TGDF+ + + S
Sbjct: 61 GDRKWSIHEFGEPFELEPGTKACLYPAGHIVGSSMLWLE-KDGESFLYTGDFKLTPGI-S 118
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
Q + TLI++TTY P Y FP + V +I + N T L G Y++GK
Sbjct: 119 AEPCQPVQVDTLIIETTYGLPRYTFPPENEVYADIIRFCRETLENGDTPVLFG-YSLGKS 177
Query: 576 RLFLEVARVLRKKIYVNAAKFRVLKC---LDFSKEDIQWFTTNEHESHIHVMPMWTLASF 632
+ L + ++ ++ ++ + L ++ F +H+ + + P F
Sbjct: 178 QSILRSLTDAKLEVMLHPTALKLTQSCAKLGWTFPSHLPFNERDHQGKVVISP-----PF 232
Query: 633 KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTEL 692
++ + + I+ +GW S R+Q P S+H + +L
Sbjct: 233 QKNAPFLQRIKNPKTAII----SGWAID----PSSTYRYQTDKAF----PLSDHADYLDL 280
Query: 693 KEFVKFVSPEHI 704
+ FV V+P+ I
Sbjct: 281 QSFVAKVAPKTI 292
>gi|346327472|gb|EGX97068.1| DNA repair protein, putative [Cordyceps militaris CM01]
Length = 582
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 20/157 (12%)
Query: 461 LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSE 511
L+ +PL TT+ + VT +ANHCPG+++ L E +N A+L+TGD R F
Sbjct: 68 LKPIPLETPTTLELAPNLELQVTLFDANHCPGAVMFLIE-RNDTAILYTGDIRSEPWFVN 126
Query: 512 EMASMSVL--QTCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK-TLF 565
++ VL T I TL LDT++ D P Q Q + E ++ + P T+F
Sbjct: 127 SISRHPVLIEYTSGIRTLDKIYLDTSFTK---DVPFQTKS-QGISELLRKVALYPADTVF 182
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
++T G E ++L +++ L+ I+V+ K R+ L
Sbjct: 183 YFQAWTYGYEEVWLALSKALKSPIHVDEYKMRIYASL 219
>gi|393770814|ref|ZP_10359291.1| hypothetical protein WSK_0252 [Novosphingobium sp. Rr 2-17]
gi|392723712|gb|EIZ81100.1| hypothetical protein WSK_0252 [Novosphingobium sp. Rr 2-17]
Length = 336
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV-LPLNQKTTIAG-ID 476
+TH H DH +G HG+ + + T L MK+ D V +P ++ +AG +
Sbjct: 36 LVTHGHADHARG-----GHGETFATPET--LAIMKLRYATDEGAVSVPYGERMALAGGVH 88
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP 536
T + A H GS IL E G+ V+ TGDF+ + + + P LI + T+ P
Sbjct: 89 ATWIPAGHVLGSAQILLE-HAGERVIVTGDFKRRPD-PTCPPFEVTPCDVLITEATFGLP 146
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVAR 583
++ P E Q V + + A + NP+ L+G+Y +GK +RL EV R
Sbjct: 147 VFRHPPVE---QEVAKLLAALTANPERCVLVGAYALGKAQRLIAEVRR 191
>gi|392566098|gb|EIW59274.1| hypothetical protein TRAVEDRAFT_36726 [Trametes versicolor
FP-101664 SS1]
Length = 983
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 138/401 (34%), Gaps = 94/401 (23%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSH---------WFLTHFHMDHYQGLT----------- 432
P +P P RVD F ++ + LTH H DH GL
Sbjct: 6 PYNAFIPPYPIRVDDFSTPSSSSTNESQTPAVGLYLLTHTHTDHLNGLAARSFGQTVVCS 65
Query: 433 ----------------------------RSFHHGKIYCSLITARLVNMKIGIPWDRLQVL 464
RS+ H KI + +N + G D L+
Sbjct: 66 HDAKEMLLRHEVYAERALRDMDLRAQNVRSYAHLKIDPQRMEDGSLN-RAGS-RDLLRAT 123
Query: 465 PLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
PL+ + +T L+ANHC G+++ L E G AVLHTGD R E ++ L
Sbjct: 124 PLHAPEEFRLNDGQAVTITLLDANHCLGAVMFLVEGDKG-AVLHTGDLR--AEPWFLNSL 180
Query: 520 QTCPIHTLILDTTYCNPL----------------------------YDFPKQEAVIQFVI 551
+ P LDT+ +PL YD P + +
Sbjct: 181 RHNPYIQRYLDTSSASPLSNHRNSSRSTVLPKLEAIYLDTACLLNTYDVPNKADAAGGLT 240
Query: 552 EAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQW 611
E + + T F I ++T+G E ++ VAR +I+V+ K +
Sbjct: 241 ELMAL--YPETTRFFINAWTLGYEDIYKAVARAFGAQIHVDRYKHGLYSHTTGDPFLTSI 298
Query: 612 FTTNEHESHIHVMPMWTLASFKRLK----HMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP 667
T + + H + R+ H + + + V S GW + +S
Sbjct: 299 ITKDGSSTRFHACERFDRCEHVRVNGRESHTPSGHHVVYVNPVNMSTAGWDQYHKQTRSQ 358
Query: 668 GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
R ++ ++ VP + H EL+ FV P + P+
Sbjct: 359 LARGERVNVLL--VPIARHSPLPELRAFVSLFKPRRVEPNT 397
>gi|353249037|emb|CCA77455.1| related to PSO2-DNA repair protein, partial [Piriformospora indica
DSM 11827]
Length = 217
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED---IQWFTTNEHESH 620
L ++G+YT+GKER+ +AR L IY K R +C S ED ++ + +
Sbjct: 9 LVVLGTYTVGKERIVKAIARALNTSIYCEPRKRRFFECQ--SSEDPELLEMLGDDPLKCD 66
Query: 621 IHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS---------------KGKKK 665
+HV+ + + S L ++ GR+ ++ PTGWT+S + ++K
Sbjct: 67 VHVISLGDVTS-DALPLYLEKWKGRWEKVLGIKPTGWTYSPPAGTDMANLQVILQRDQRK 125
Query: 666 S-------PGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANA 718
+ P R ++ Y VPYSEH SF EL F +S +I +VN S +
Sbjct: 126 TYNWASLRPMRN-STPNVMLYGVPYSEHSSFFELTCFALSISYVRMIATVNVHNAKSRSK 184
Query: 719 M 719
M
Sbjct: 185 M 185
>gi|398409002|ref|XP_003855966.1| hypothetical protein MYCGRDRAFT_65158, partial [Zymoseptoria
tritici IPO323]
gi|339475851|gb|EGP90942.1| hypothetical protein MYCGRDRAFT_65158 [Zymoseptoria tritici IPO323]
Length = 515
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 43/230 (18%)
Query: 419 FLTHFHMDHYQGLTRSFHHGK-IYCSLITARLV----------NMKIGIPWDR------- 460
FL+H H DH GL + G IYCS T ++ N GI R
Sbjct: 33 FLSHVHTDHLVGLESLSYQGPFIYCSPATREVLLRLEKYPHRMNFANGILESRKQTFKHL 92
Query: 461 ---LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQ--NGKAVLHTGDFR-- 508
L+ +PL T I I VT +ANHC G+++ L E + + KAVL+TGD R
Sbjct: 93 KRLLKPVPLETPTWIELEPGRKIRVTLFDANHCVGAVMFLIEGEGLDAKAVLYTGDIRSE 152
Query: 509 --FSEEMASMSVLQTCPIH----------TLILDTTYCNPLYDFPKQEAVIQFVIEAIQA 556
+ + ++ VL H + LDTT+ N + + + + E ++
Sbjct: 153 RWWVDSLSRYPVLNRYLSHFGKEPRKRLDMIYLDTTFANKTDRYQHFPSKAEGISELLEK 212
Query: 557 ESFNPK-TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
S P+ T F S+T G E ++ ++ +I+V+ K+ V + L S
Sbjct: 213 VSMYPRNTRFYFDSWTFGYEDVWQALSAHFNTQIHVDQFKYGVYRSLGGS 262
>gi|18314051|ref|NP_560718.1| hypothetical protein PAE3418 [Pyrobaculum aerophilum str. IM2]
gi|18161631|gb|AAL64900.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 314
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 43/304 (14%)
Query: 403 FRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQ 462
F VD L G +TH H DH +++ + + + T ++++ G P R
Sbjct: 18 FVVDPTGPLTGPVDFVLITHGHSDH---VSKHAYRHTVVATRETFSAMSVRFGNPPPRRV 74
Query: 463 VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTC 522
+ I G+ + LEA H GS++ L E +G +L TGDF + + + +
Sbjct: 75 TVAPGNVLEIGGVQIAVLEAGHILGSVMYLAE-VDGVQILVTGDFNTAGSILTDAAEPIE 133
Query: 523 PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVA 582
L+++ TY +P Y FP + V + ++ + E + I +Y +GK + E+A
Sbjct: 134 RPDVLVMEATYGDPSYVFPNRAEVYEEFLDVV--ERGISEGGVAISAYPLGKAQ---EIA 188
Query: 583 RVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQY 642
++L K +A+ + K L T N E + V+P LK Y
Sbjct: 189 KLLGNKAGAHASVAKYNKALGIP-------TGNGDE--VIVVP--------NLKAAPPNY 231
Query: 643 AGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR--YEVPYSEHCSFTELKEFVKFVS 700
F + V +GW + R ++ I R Y +P S+H F L EF S
Sbjct: 232 ---FKIDV----SGWYADE--------RLRKNAISRGVYGIPLSDHSDFPSLVEFATAAS 276
Query: 701 PEHI 704
P +
Sbjct: 277 PRLV 280
>gi|149030437|gb|EDL85474.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Rattus norvegicus]
gi|149030438|gb|EDL85475.1| DNA cross-link repair 1B, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Rattus norvegicus]
Length = 415
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 25/185 (13%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
IHTL LD T CNP P ++ Q +I+ I+ P+ IG Y++GKE L ++A
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEATQQIIQLIRQ---FPQHNIKIGLYSLGKESLLEQLAL 69
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYA 643
+ + ++ + +++ L + D+ FT E IH + + H +
Sbjct: 70 EFQTWVVLSPQRLELVQLLGLA--DV--FTVEEEAGRIHAV------DHMEICHSAMLQW 119
Query: 644 GRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
+ +A PT K +SP +I Y +PYS+H S++EL+ FV + P
Sbjct: 120 NQTHPTIAIFPTS-----RKIRSP-----HPSI--YSIPYSDHSSYSELRAFVAALRPCQ 167
Query: 704 IIPSV 708
++P V
Sbjct: 168 VVPIV 172
>gi|294011707|ref|YP_003545167.1| putative exonuclease [Sphingobium japonicum UT26S]
gi|292675037|dbj|BAI96555.1| putative exonuclease [Sphingobium japonicum UT26S]
Length = 330
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T ++ ++ G LP ++ + G+ ++
Sbjct: 31 LVTHGHADHARG-----GHGHVWATRETLAIMALRYGTA--SGTALPYGEEIRMNGVTIS 83
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS I+ + G+ V+ TGD++ + + Q P + + T+ P++
Sbjct: 84 YIPAGHVLGSAQIVLD-HAGERVVVTGDYKRRPD-PTCQPFQPVPCDIFVTEATFGLPVF 141
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P + + ++ A+ A NP L+G+Y +GK +RL E+ AR R I+++ A
Sbjct: 142 RHPDTGSEVDRLLAALHA---NPDRCVLVGAYALGKAQRLIGELRARGHRDPIHIHGALD 198
Query: 597 RV 598
R+
Sbjct: 199 RM 200
>gi|393238139|gb|EJD45677.1| hypothetical protein AURDEDRAFT_103419, partial [Auricularia
delicata TFB-10046 SS5]
Length = 738
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 152/392 (38%), Gaps = 97/392 (24%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDC----SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR 448
P +P P R+D F R + + L+H H+DH GL+ ++ CS +
Sbjct: 6 PNNGFIPPYPIRIDTFYTPRDAVFSPPALYLLSHTHVDHLTGLSAKSFGARVICSPDAKQ 65
Query: 449 -LVNMKIGI---------------PWDRLQV---------------------LPLNQKTT 471
L+NM+ P+ L++ +PLN
Sbjct: 66 MLLNMEPAADRIAYDGGDRALRNRPYSHLKIDPVTREDGTVDYSMTRDLLLPVPLNAPRV 125
Query: 472 I-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP--- 523
+ +T L+ANHC G+++ L E G AVLHTGDFR E A ++ L+ P
Sbjct: 126 FELSDKQHVSITVLDANHCLGAVMFLVEGDKG-AVLHTGDFR--AEPAFLASLKLNPLIQ 182
Query: 524 -------------------IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
+ + LDT ++ P + +++ + F T
Sbjct: 183 RYLAPKFSFAGTDNGPTQALEAIYLDTACMLQMHQVPAKVDATDGLVQLMAL--FPSDTR 240
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV-LKCLD-FSKEDIQWFTTNEHESHIH 622
F + +T G E + L+ VL KI+V+ K + +K D F K + + +E+ S H
Sbjct: 241 FFLNCWTWGYEDI-LKALTVL--KIHVDRYKHDIFMKTSDPFLKSLV---SRDENVSRFH 294
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG-----WTFSKGKKKSPGRRWQQGTII 677
F R K ++ + + IV +P W + +S R + G ++
Sbjct: 295 A-----CERFDRCKQVN--FPPKTESIVYVNPVDMSIERWAAYLEETRS---RLESGELL 344
Query: 678 -RYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
VP + H EL+ FV+ P ++P+
Sbjct: 345 TNLLVPLARHSPLPELQAFVRMFRPRTVVPNT 376
>gi|397470398|ref|XP_003806809.1| PREDICTED: protein artemis [Pan paniscus]
Length = 572
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 36/238 (15%)
Query: 490 IILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQ 543
+ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +
Sbjct: 1 MFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 544 EAVIQFVIEAIQAESFNPKTLF----LIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRV 598
E + V+E +Q S+ ++L+ L G E LF ++ L +++VN FR
Sbjct: 60 EECLSGVLELVQ--SWITQSLYHAVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRN 117
Query: 599 LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPT 655
+ +I T + + IH + + + R + I++ P+
Sbjct: 118 MP-------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPS 170
Query: 656 GWTFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 171 TMWFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 221
>gi|358395254|gb|EHK44641.1| hypothetical protein TRIATDRAFT_292345 [Trichoderma atroviride IMI
206040]
Length = 641
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 403 FRVDAFKYLRGDC--SHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL----------V 450
R+D F++ G S FL+H H DH GL + +YCS T + +
Sbjct: 14 IRIDYFRHHDGISPPSACFLSHVHTDHLAGL-ETLRSPFVYCSAATREILLRLERYPCRI 72
Query: 451 NMKIGIPWDRLQ---------VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAV 501
N GI R Q V P N I+ + + S ++ E Q GKA+
Sbjct: 73 NYSKGILEARQQTYKHLSKVIVCPPNHGLEISSWLHSSMRITALALSCSVIIEGQ-GKAI 131
Query: 502 LHTGDFR----FSEEMASMSVL--QTCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIE 552
L+TGD R F +A L TC I TL LDT++ + + K E + + + +
Sbjct: 132 LYTGDVRCEPWFVNTIARNPTLIEYTCGIKTLDTIYLDTSFTDNVPFQTKAEGIAELLRK 191
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKE 607
Q + T+F I S+T G E +++ +++ L I+V+ K R+ L S +
Sbjct: 192 VAQ---YPKDTVFHIQSWTYGYEDVWIALSKALNSPIHVDDYKLRIFSSLTASPD 243
>gi|452983046|gb|EME82804.1| hypothetical protein MYCFIDRAFT_109779, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 337
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 113/250 (45%), Gaps = 51/250 (20%)
Query: 403 FRVDAFKY--LRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV---------- 450
R+D F++ R +H FL+H H DH GL S + ++CS T LV
Sbjct: 14 IRIDRFRHDPNRPALAH-FLSHVHSDHLVGL-ESRNAVPLHCSPATRELVLRLEKYPNRM 71
Query: 451 NMKIGIPWDR----------LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEP 495
N GI R L+ +PL T I I VT +ANHC G+++ L E
Sbjct: 72 NFAKGILESRKQTYKHLKTLLRPIPLETPTEIMLSPENTIRVTLFDANHCVGAVMFLIE- 130
Query: 496 QNGKAVLHTGDFRFSEEMASMSVLQ------------TCPIHTL---ILDTTYC--NPLY 538
NGKA+L+TGD R SE S+ + + P+ L LDTT+ N Y
Sbjct: 131 GNGKAILYTGDIR-SEPWWVNSICRQPTLLPYVCSGNSKPLRQLDNIYLDTTFASKNDRY 189
Query: 539 -DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFR 597
FP + I+ ++E + + T F + ++T G E ++ ++ L +I+V+ K+
Sbjct: 190 RHFPSKAEGIRELLEKVM--KYPRDTEFYLDAWTFGYEDVWKALSAFLGSQIHVDDYKYA 247
Query: 598 VLKCLDFSKE 607
+ + L E
Sbjct: 248 IYRGLHSGAE 257
>gi|452844322|gb|EME46256.1| hypothetical protein DOTSEDRAFT_148314, partial [Dothistroma
septosporum NZE10]
Length = 338
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 46/229 (20%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDR-------- 460
FL+H H DH GL + IYCS T ++ N GI R
Sbjct: 32 FLSHVHTDHLVGL-ETCKSPFIYCSSATREILLKLEKHPHRMNFAKGILESRKQTYKGIG 90
Query: 461 --LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----- 508
L+ +PL TT+ I VT +ANHC G+ + L E ++ K +L+TGD R
Sbjct: 91 KLLKPIPLETPTTLELAPGRSIRVTLFDANHCVGAAMFLIEDES-KTILYTGDIRSELWW 149
Query: 509 ---------FSEEMASMSVLQTCPIHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQA 556
+A+ L + T+ LDTT+ +P FP + I+ ++ +
Sbjct: 150 VNSIIRNPLLLPYVAANEALPLKQLDTIYLDTTFASKEDPYRHFPSKADGIKELLREVA- 208
Query: 557 ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFS 605
+ TLF ++T G E ++ ++ L +I+V+ ++ V K L S
Sbjct: 209 -RYPADTLFYFDAWTFGYEEVWQALSSFLVSQIHVDDYRYGVYKSLSRS 256
>gi|399059069|ref|ZP_10744920.1| putative exonuclease, DNA ligase-associated [Novosphingobium sp.
AP12]
gi|398040050|gb|EJL33167.1| putative exonuclease, DNA ligase-associated [Novosphingobium sp.
AP12]
Length = 334
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 126/292 (43%), Gaps = 37/292 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG-IDV 477
+TH H DH +G HG+ + + T ++ ++ D +P ++ + G +
Sbjct: 34 LVTHGHADHARG-----GHGQTFATPATLAIMKLRYATE-DGAVPVPYGERIALPGDVHA 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
T + A H GS IL E G+ ++ TGDF+ + + + P L+ + T+ P+
Sbjct: 88 TWIPAGHVLGSAQILLE-HAGERIVVTGDFKRRSD-PTCPPFEVTPCDVLVTEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARV-LRKKIYVNAAK 595
+ P E Q + + + A + NP+ L+G+Y +GK +RL E+ R R I+++ A
Sbjct: 146 FRHPPVE---QEIAKLLAALAANPERCVLVGAYALGKAQRLIAELRRAGHRDTIWLHGAM 202
Query: 596 FRVLKCLDFSKEDIQWF------TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLI 649
R+ + + D+ T E I V P ++++++ R
Sbjct: 203 ERMCRLYEEWGVDLGDLRLMSDATKEELAGSIVVAPP---------SALNDRWSRRLPEP 253
Query: 650 VAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
+ +GW + + + ++ + S+H + EL + V V+P
Sbjct: 254 ITAMASGWMRVRQRARQ--------RMVELPLIISDHADWDELTQTVVDVNP 297
>gi|408377213|ref|ZP_11174816.1| hypothetical protein QWE_06448 [Agrobacterium albertimagni AOL15]
gi|407749172|gb|EKF60685.1| hypothetical protein QWE_06448 [Agrobacterium albertimagni AOL15]
Length = 337
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 44/300 (14%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH RS HG + + T ++ ++ G + Q T+I G+ V
Sbjct: 34 LITHGHSDH----ARS-GHGHVLATRQTLDIMAIRYGEDFCGTSQSADFGDTTSINGVTV 88
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E Q + V+ +GD++ + S + P I + T+ P+
Sbjct: 89 RFHPAGHVLGSAQIEIEAQGTRIVV-SGDYKRGADPTCAS-FEPVPCDVFITEATFGLPV 146
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR--VLRKKIYVNAAK 595
+ P IQ ++ ++Q P+ LIG+Y +GK + + + R K IY++ +
Sbjct: 147 FHHPDPRLEIQKLLTSLQQ---FPERSHLIGAYALGKAQRVISLIRRGGYEKPIYIHGSM 203
Query: 596 FRVLKCLDFSKEDIQW-----FTTNEHESHIHVMPMWTLASFKRL------KHMSNQYAG 644
R+ C ++++ ++ TT + +S +FK ++++A
Sbjct: 204 ARL--CDYYTEQGVELGELRPATTEDKKS----------GAFKGAVVIGPPSAFNDRWAR 251
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
RF +A +GW + + K G + + S+HC + EL + ++ V P+ +
Sbjct: 252 RFEDPLAIFASGWMMVRQRAKQRG--------VELPLVISDHCDWPELLDTIREVGPQEV 303
>gi|401888595|gb|EJT52549.1| hypothetical protein A1Q1_03681 [Trichosporon asahii var. asahii
CBS 2479]
Length = 513
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 562 KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHI 621
+TL LIG+Y+IGKER+ + KIY N K ++LKC D E T+ E I
Sbjct: 307 RTLILIGTYSIGKERIAIGA------KIYCNPRKTQILKCED-DPELHDLMGTDPIECQI 359
Query: 622 HVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFS 660
H++P+ + + L+ F+ ++AF PTGWTFS
Sbjct: 360 HLVPLSNI-TLDNLEEYLATMHPHFNRVLAFRPTGWTFS 397
>gi|134054879|emb|CAK36892.1| unnamed protein product [Aspergillus niger]
Length = 871
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 82/160 (51%), Gaps = 22/160 (13%)
Query: 461 LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
L+ +PLN T + I T +ANHC G+++ L E NGKA+L+TGD R +E
Sbjct: 166 LRPIPLNTPTELDLTPRLSIRATLFDANHCTGAVMFLIE-GNGKAILYTGDIR-AEPWWV 223
Query: 516 MSVLQT---CP-------IHTLILDTTYCNP---LYDFPKQEAVIQFVIEAIQAESFNPK 562
S+++ P + + +D T+ P + FP + ++ ++ IQA + +
Sbjct: 224 NSIIRNPVLIPYTLGNKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELLNKIQA--YPDR 281
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T F + ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 282 TTFYLRAWTFGYEEVWMALSAALNSKIHVDRYQMDLYRSL 321
>gi|114629498|ref|XP_001146648.1| PREDICTED: protein artemis isoform 2 [Pan troglodytes]
gi|114629500|ref|XP_001146778.1| PREDICTED: protein artemis isoform 4 [Pan troglodytes]
gi|114629502|ref|XP_001146913.1| PREDICTED: protein artemis isoform 6 [Pan troglodytes]
gi|114629504|ref|XP_001146991.1| PREDICTED: protein artemis isoform 7 [Pan troglodytes]
Length = 572
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 32/236 (13%)
Query: 490 IILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQ 543
+ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +
Sbjct: 1 MFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 544 EAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLK 600
E ++ V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 60 EECLRGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP 119
Query: 601 CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGW 657
+I T + + IH + + + R + I++ P+
Sbjct: 120 -------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTM 172
Query: 658 TFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 173 WFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 221
>gi|193785702|dbj|BAG51137.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 490 IILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQ 543
+ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +
Sbjct: 1 MFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 544 EAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC 601
E + V+E +++ + +P ++L G E LF ++ L +++VN K + +
Sbjct: 60 EECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVRVHVN--KLDMFRN 117
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+ +I T + + IH + + + R + I++ P+
Sbjct: 118 M----PEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 173
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 174 FGERSRKT-------NVIVRTGESSYRARFSFHSSYSEIKDFLSYLCPVNAYPNV 221
>gi|380490332|emb|CCF36086.1| artemis protein [Colletotrichum higginsianum]
Length = 580
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 76/137 (55%), Gaps = 13/137 (9%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMA-SMSVLQ-TCPIHTL- 527
I VT +ANHCPG+++ L E + +A+L+TGD R F +A + +V++ T I TL
Sbjct: 52 IQVTLFDANHCPGAVMFLIEDLH-RAILYTGDVRSEPWFVNSIARNPAVIEYTSGIRTLD 110
Query: 528 --ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 585
LDT++ L D P Q + S+ T+F I ++T G E++++ +++ L
Sbjct: 111 KIYLDTSF---LKDVPFQTKAEGIAELLRKVASYPNDTVFHIQAWTYGYEQVWIALSKAL 167
Query: 586 RKKIYVNAAKFRVLKCL 602
R +I+V+ K R+ L
Sbjct: 168 RSRIHVDDYKMRMFSAL 184
>gi|418300061|ref|ZP_12911889.1| mRNA 3-end processing factor [Agrobacterium tumefaciens CCNWGS0286]
gi|355534003|gb|EHH03317.1| mRNA 3-end processing factor [Agrobacterium tumefaciens CCNWGS0286]
Length = 336
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 140/327 (42%), Gaps = 50/327 (15%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
P P F VD + + +TH H DH + HG + + T ++ +
Sbjct: 11 PKGLYCPAGDFYVDPVR----PVARALITHGHSDHARA-----GHGAVLATRQTLDIMRI 61
Query: 453 KIGIPW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
+ G + Q + ++ + G+ V A H GS I E NG ++ +GD++
Sbjct: 62 RYGEDFCGSEQAVDFGERVNVNGVTVGFHPAGHVLGSAQISVE-MNGLRIVASGDYKRGV 120
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ + + +T P I + T+ P++ P I ++ +I+ P+ L+G+Y+
Sbjct: 121 D-PTCAPFETVPCDVFITEATFGLPVFHHPLPRVEIGKLLTSIKQ---FPERTHLVGAYS 176
Query: 572 IGKERLFLEVARVLRKK-----IYVNAAKFRV--------LKCLDFSKEDIQWFTTNEHE 618
+GK + V R+LR IY++ A R+ + D ++ + +
Sbjct: 177 LGKAQ---RVIRLLRDNGYADPIYIHGALARLCDYYVSEGIDLGDLRPATLEKSDPSAFK 233
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTII 677
I V P ++F+ ++A RF+ ++AF+ +GW + + K G +
Sbjct: 234 GAIVVGPP---SAFQ------ERWARRFNEPLIAFA-SGWMMVRQRAKQGG--------V 275
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHI 704
+ S+HC + EL E +K +SP+ I
Sbjct: 276 ELPLVISDHCDWPELLETIKEISPQAI 302
>gi|87308627|ref|ZP_01090767.1| hypothetical protein DSM3645_14745 [Blastopirellula marina DSM
3645]
gi|87288719|gb|EAQ80613.1| hypothetical protein DSM3645_14745 [Blastopirellula marina DSM
3645]
Length = 279
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 55/295 (18%)
Query: 425 MDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANH 484
MDH + H I C+ TA LV +IG + + +PL + +T + A H
Sbjct: 1 MDH------AARHETILCTPETAALVRHRIG--ETQYREMPLGEPIEFRQSRLTTVSAGH 52
Query: 485 CPGSIIILFEPQNGKAVLHTGDFRFSEEM-ASMSVLQTCPIHTLILDTTYCNPLYDFP-K 542
GS ++L E G ++L+TGD+R E A + L + L+++ T+ +P Y P +
Sbjct: 53 VLGSAMLLAEQDEG-SMLYTGDYRLGESYTAGQAELPHADV--LVMECTFGDPFYRLPPR 109
Query: 543 QEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL---------RKKIYVNA 593
E + +F+ + QA F ++ +Y +GK + EV ++L ++ ++ +
Sbjct: 110 AETIAKFLDQVDQA--FRIGATPIVHAYVLGKAQ---EVTKILTHHGIRVQQQQDVFAIS 164
Query: 594 AKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
+ C D ++ + + H+ V P R + S+ + L F+
Sbjct: 165 QIYEACGC-DLGAYEL--YDGRPKQRHVVVSP-------PRSQRGSDVHG--VVLAQHFA 212
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEFVKFVSPEHI 704
TGW W RY VP S+H + EL E ++ V+P+ I
Sbjct: 213 MTGWG------------WNPQLAARYRCDHVVPLSDHADYGELLETIEQVAPQRI 255
>gi|402826949|ref|ZP_10876087.1| hypothetical protein LH128_27446 [Sphingomonas sp. LH128]
gi|402259515|gb|EJU09740.1| hypothetical protein LH128_27446 [Sphingomonas sp. LH128]
Length = 334
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAG-IDV 477
+TH H DH +G HG + + T ++ ++ + V P ++ + G +
Sbjct: 34 LVTHGHADHARG-----GHGATFATPETLAIMKLRYATEEGAVPV-PYGERIALPGDVHA 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
T + A H GS IL E G+ ++ TGDF+ + + + P L+ + T+ P+
Sbjct: 88 TWIPAGHVLGSAQILLE-HAGERIIVTGDFKRRAD-PTCPPFEVTPCDVLVTEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRK-KIYVNAAK 595
+ P E I ++ A+ A NP+ L+G+Y +GK +RL E+ R + I+++ A
Sbjct: 146 FRHPPVEEEIAKLLSALAA---NPERCVLVGAYALGKAQRLIAELRRAGHQDTIWLHGAM 202
Query: 596 FRVLK 600
R+ +
Sbjct: 203 ERMCR 207
>gi|119496867|ref|XP_001265207.1| hypothetical protein NFIA_020180 [Neosartorya fischeri NRRL 181]
gi|119413369|gb|EAW23310.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
Length = 690
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 20/159 (12%)
Query: 461 LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSE 511
L+ +PL+ T I I VT L+ANHC G+++ L E +GKAVL+TGD R + +
Sbjct: 22 LRPIPLDTPTEIELTPLLSIRVTLLDANHCAGAVMFLIE-GDGKAVLYTGDIRAERWWVD 80
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLY--------DFPKQEAVIQFVIEAIQAESFNPKT 563
+ VL + + LD Y + + FP + ++ +++ ++A + +T
Sbjct: 81 SLVRHPVLIPYTLGSKKLDRIYLDTTFARINHVCRSFPSKAEGLRELLQKVEA--YPKET 138
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+F ++T G E +++ ++ +L K++V+ + + + L
Sbjct: 139 VFYFRAWTFGYEDVWIALSALLNTKVHVDRYQIGLYRSL 177
>gi|390167763|ref|ZP_10219743.1| putative exonuclease [Sphingobium indicum B90A]
gi|389589628|gb|EIM67643.1| putative exonuclease [Sphingobium indicum B90A]
Length = 330
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T ++ ++ G LP ++ + G+ ++
Sbjct: 31 LVTHGHADHARG-----GHGHVWATRETLAIMALRYGTA--SGTALPYGEEIRMNGVTIS 83
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS I+ + G+ V+ TGD++ + + Q P + + T+ P++
Sbjct: 84 YIPAGHVLGSAQIVLD-HAGERVVVTGDYKRRPD-PTCQPFQPVPCDIFVTEATFGLPVF 141
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P + + ++ A+ A NP L+G+Y +GK +RL E+ AR I+++ A
Sbjct: 142 RHPDTGSEVDRLLAALHA---NPDRCVLVGAYALGKAQRLISELRARGHHDPIHIHGALD 198
Query: 597 RV 598
R+
Sbjct: 199 RM 200
>gi|350286570|gb|EGZ67817.1| hypothetical protein NEUTE2DRAFT_95709, partial [Neurospora
tetrasperma FGSC 2509]
Length = 572
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 69/123 (56%), Gaps = 13/123 (10%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR-----FSEEMASMSVLQTC----PIH 525
I VT L+ANHCPG+++ LFE Q GKA L+TGD R + S S++Q +
Sbjct: 71 IQVTLLDANHCPGAVMFLFEGQ-GKAALYTGDIRSEPWHVNAIARSPSMVQYAYGLKTLD 129
Query: 526 TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVL 585
T+ LDT++ + +FP + I +++ I + P T+F ++T G E +++ +++ L
Sbjct: 130 TIYLDTSFIEDI-EFPTKAQGISELLDKIS--RYPPNTIFHFQAWTYGYEDVWVALSKAL 186
Query: 586 RKK 588
+
Sbjct: 187 ESR 189
>gi|76496499|ref|NP_001029029.1| protein artemis isoform d [Homo sapiens]
gi|76496501|ref|NP_001029030.1| protein artemis isoform c [Homo sapiens]
Length = 572
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 490 IILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQ 543
+ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +
Sbjct: 1 MFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 544 EAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLK 600
E + V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 60 EECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP 119
Query: 601 CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGW 657
+I T + + IH + + + R + I++ P+
Sbjct: 120 -------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTM 172
Query: 658 TFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 173 WFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 221
>gi|114629492|ref|XP_001146437.1| PREDICTED: protein artemis isoform 1 [Pan troglodytes]
gi|114629494|ref|XP_001146717.1| PREDICTED: protein artemis isoform 3 [Pan troglodytes]
gi|114629496|ref|XP_001146840.1| PREDICTED: protein artemis isoform 5 [Pan troglodytes]
Length = 577
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 110/235 (46%), Gaps = 32/235 (13%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +E
Sbjct: 7 FLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKC 601
++ V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 66 ECLRGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP- 124
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+I T + + IH + + + R + I++ P+
Sbjct: 125 ------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 178
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 179 FGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|21427582|gb|AAM53255.1| Athabascan SCID transcript variant 1 [Homo sapiens]
gi|21427584|gb|AAM53256.1| Athabascan SCID transcript variant 2 [Homo sapiens]
gi|21427590|gb|AAM53259.1| Athabascan SCID transcript variant 5 [Homo sapiens]
gi|21427592|gb|AAM53260.1| Athabascan SCID transcript variant 6 [Homo sapiens]
Length = 572
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 32/236 (13%)
Query: 490 IILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQ 543
+ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +
Sbjct: 1 MFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 544 EAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLK 600
E + V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 60 EECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP 119
Query: 601 CLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGW 657
+I T + + IH + + + R + I++ P+
Sbjct: 120 -------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTM 172
Query: 658 TFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 173 WFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 221
>gi|358372094|dbj|GAA88699.1| DNA repair protein [Aspergillus kawachii IFO 4308]
Length = 737
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 22/160 (13%)
Query: 461 LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
L+ +PLN T + I VT +ANHC G+++ L E NGKA+L+TGD R +E
Sbjct: 33 LRPIPLNTPTELDLTPRLSIRVTLFDANHCTGAVMFLIE-GNGKAILYTGDIR-AEPWWV 90
Query: 516 MSVLQT---CP-------IHTLILDTTYCNP---LYDFPKQEAVIQFVIEAIQAESFNPK 562
S+++ P + + +D T+ P + FP + ++ ++ +Q +
Sbjct: 91 NSIIRNPVLVPYTLGIKQLDNIYIDNTFARPSHVCHTFPSKAEGLKELLNKVQG--YPDS 148
Query: 563 TLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
T F + ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 149 TTFYLRAWTFGYEEVWMALSAALNSKIHVDRYQMDLYRSL 188
>gi|334344426|ref|YP_004552978.1| putative exonuclease [Sphingobium chlorophenolicum L-1]
gi|334101048|gb|AEG48472.1| putative exonuclease [Sphingobium chlorophenolicum L-1]
Length = 330
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 14/182 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T ++ ++ G LP ++ + G+ ++
Sbjct: 31 LITHGHADHARG-----GHGHVWATQETLAIMALRYGTA--SGTALPYGEEIRMNGVAIS 83
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS I+ + G+ V+ TGD++ + + Q P + + T+ P++
Sbjct: 84 YIPAGHVLGSAQIVLD-HAGERVVVTGDYKRRPDPTCLP-YQPVPCDIFVTEATFGLPVF 141
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P + + ++ A+ A NP L+G+Y +GK +RL E+ AR I+++ A
Sbjct: 142 RHPDTGSEVDRLLAALHA---NPDRCVLVGAYALGKAQRLISELRARGHHDPIHIHGALD 198
Query: 597 RV 598
R+
Sbjct: 199 RM 200
>gi|440469687|gb|ELQ38790.1| hypothetical protein OOU_Y34scaffold00528g82 [Magnaporthe oryzae
Y34]
gi|440488779|gb|ELQ68480.1| hypothetical protein OOW_P131scaffold00240g5 [Magnaporthe oryzae
P131]
Length = 676
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 92/188 (48%), Gaps = 44/188 (23%)
Query: 440 IYCSLITARL----------VNMKIGIPWDRLQV----------LPLNQKTTI-----AG 474
+YCS T L +N GI R+Q +PL+ T I
Sbjct: 26 VYCSAATRELLLRLERYPCRINYAKGILEARVQTYKHLKNLLKPIPLDTPTQIELAPGKS 85
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
I VT L+ANHC G+++ LFE +GKAVL+TG ++T + + LDT+
Sbjct: 86 IGVTLLDANHCTGAVMFLFE-GDGKAVLYTG-------------IKT--LSRIYLDTSNT 129
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ FP ++A ++ ++E ++ S+ T+F ++T G E +++ +++ L I+V+
Sbjct: 130 EDIA-FPSKDAGLKELLEKLK--SYPKDTIFHFKAWTFGYEDVWIALSKALDSPIHVDDY 186
Query: 595 KFRVLKCL 602
K ++ + L
Sbjct: 187 KMQLYRSL 194
>gi|343469770|emb|CCD17336.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 308
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+F ++ +PTGWT K+K R ++ ++VPYSEHCSF+EL +FV FV+P +
Sbjct: 52 QFDCVLCINPTGWTGKPSKQKISDR------VVSFKVPYSEHCSFSELIDFVSFVNPRVV 105
Query: 705 IPSVN 709
IP+V+
Sbjct: 106 IPTVS 110
>gi|158254628|dbj|BAF83287.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 111/235 (47%), Gaps = 30/235 (12%)
Query: 490 IILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQ 543
+ LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +
Sbjct: 1 MFLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSR 59
Query: 544 EAVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKC 601
E + V+E +++ + +P ++L G E LF ++ L +++VN K + +
Sbjct: 60 EECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVN--KLDMFRN 117
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+ +I T + + IH + + + R + I++ P+
Sbjct: 118 M----PEILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 173
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 174 FGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 221
>gi|375148268|ref|YP_005010709.1| hypothetical protein [Niastella koreensis GR20-10]
gi|361062314|gb|AEW01306.1| hypothetical protein Niako_5067 [Niastella koreensis GR20-10]
Length = 339
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
+TH H DH + ++S+ C + L+ +++G P++ Q + N++ + + V+
Sbjct: 31 ITHAHSDHARPGSQSY-----LCHRDSLPLLKLRLG-PYN-YQTVEWNERIYMNEVMVSL 83
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYD 539
A H GS + E G+ + +GD++ +E V + P HT I ++T+ P+Y+
Sbjct: 84 HPAGHIIGSSQVRVE-HKGEVWVVSGDYK-TEPDGISGVFEPIPCHTFISESTFGLPIYN 141
Query: 540 FPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVL 599
+ Q + + +++ KT LIG Y++GK + L+ + IYV+ A + V
Sbjct: 142 WKPQHEIYHEIQNWVRSNEVAGKTSVLIG-YSLGKAQRILQALEEVTGNIYVHGAIWNVQ 200
Query: 600 KCL 602
+ L
Sbjct: 201 ETL 203
>gi|157876139|ref|XP_001686430.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129504|emb|CAJ08047.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 664
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 67/174 (38%), Gaps = 69/174 (39%)
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS-------------------------- 510
V + ANHCPG+++ LF VLHTGDFRF+
Sbjct: 55 VRLIPANHCPGAVMFLFVSPVFGTVLHTGDFRFNGSRETWEQFVRSSNRRQTYVPPSPCL 114
Query: 511 ----EEMASMSVLQTCPIH--------------------TLILDTTYCNPLYDFPKQEAV 546
EE + + P++ L+LD T+C P Y FP Q V
Sbjct: 115 IKREEEQHASTAAPPAPVYEQFIADDEALRDVAQRQLLDVLLLDNTFCAPAYRFPSQWEV 174
Query: 547 IQFVIEAIQA--------------ESFNP-----KTLFLIGSYTIGKERLFLEV 581
Q VIE +++ + +P + LIG YTIGKER+ L +
Sbjct: 175 TQRVIEVLRSLFHRAACRARVPAPSAGHPQHRQVRCAVLIGCYTIGKERVALAL 228
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRW-QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
R+ ++ PTGW+ K+ R ++ T++R VPYSEHC+F EL EFV FV+P
Sbjct: 430 RYDQVLMVEPTGWS-----KRCVAREVSEKYTLLR--VPYSEHCAFHELLEFVAFVNPAR 482
Query: 704 IIPSVNNDG 712
++P+V+ +G
Sbjct: 483 VVPTVSEEG 491
>gi|374326702|ref|YP_005084902.1| putative mRNA 3-end processing factor [Pyrobaculum sp. 1860]
gi|356641971|gb|AET32650.1| putative mRNA 3-end processing factor [Pyrobaculum sp. 1860]
Length = 324
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 124/303 (40%), Gaps = 41/303 (13%)
Query: 403 FRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG-IPWDRL 461
F VD +RG +TH H DH ++R + + + T ++++ G +P R+
Sbjct: 28 FVVDPTGPVRGRVDFVLVTHGHSDH---VSRYVYRHLVVATRETFAAMSVRFGGLPPRRV 84
Query: 462 QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
P + + + LEA H GS++ + E +G +L TGDF S + +
Sbjct: 85 VTAP-GAVLELGNVQIAVLEAGHILGSVMYMAE-VDGLQILITGDFNTSGSIITDGAEPF 142
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
+ L+++ TY +P Y FP + V +++ + E + I +Y +GK + EV
Sbjct: 143 EKLDVLVMEATYGDPAYVFPNRAEVYNELMDVV--ERLVGEGGVAISAYPLGKAQ---EV 197
Query: 582 ARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQ 641
A + ++ +++ R K L + + + ++P +A
Sbjct: 198 AALFGRRAGAHSSVARYNKALGIPTGSV---------TDVLIVPNLRMAP---------- 238
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
G F + V +GW + +K+ G +P S+H F L EF SP
Sbjct: 239 -PGYFKVEV----SGWYVDEATRKNAEAAGVHG------IPLSDHSDFPSLVEFATEASP 287
Query: 702 EHI 704
+
Sbjct: 288 RLV 290
>gi|76496495|ref|NP_071932.2| protein artemis isoform b [Homo sapiens]
gi|33872940|gb|AAH09185.1| DCLRE1C protein [Homo sapiens]
gi|94717600|gb|ABF47101.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae) [Homo
sapiens]
gi|119606654|gb|EAW86248.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|119606656|gb|EAW86250.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
gi|119606657|gb|EAW86251.1| DNA cross-link repair 1C (PSO2 homolog, S. cerevisiae), isoform
CRA_a [Homo sapiens]
Length = 577
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 32/235 (13%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +E
Sbjct: 7 FLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKC 601
+ V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 66 ECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP- 124
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+I T + + IH + + + R + I++ P+
Sbjct: 125 ------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 178
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 179 FGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|21427586|gb|AAM53257.1| Athabascan SCID transcript variant 3 [Homo sapiens]
gi|21427588|gb|AAM53258.1| Athabascan SCID transcript variant 4 [Homo sapiens]
Length = 577
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 109/235 (46%), Gaps = 32/235 (13%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +E
Sbjct: 7 FLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKC 601
+ V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 66 ECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP- 124
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+I T + + IH + + + R + I++ P+
Sbjct: 125 ------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 178
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 179 FGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|149239765|ref|XP_001525758.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449881|gb|EDK44137.1| hypothetical protein LELG_02316 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 645
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 20/155 (12%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
+PG VD F RG +FLTH H DH QGL ++YCS +T ++ +
Sbjct: 14 IPGV--YVDKFN-SRGKL--FFLTHSHEDHLQGLLNQSFCKRVYCSKLTRDIIKLDPKYK 68
Query: 458 WDRLQVL-------PLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
++++ L P T + VT +E HCPGS + LFE N A L TGD R +
Sbjct: 69 -NKVKYLVAKEFNNPFQLSTNAFTVTVTMIETYHCPGSAMFLFETGNS-ACLVTGDIR-A 125
Query: 511 EEMASMSVLQTCPIHTLI-----LDTTYCNPLYDF 540
EE + S+++ + I LDT Y + + +
Sbjct: 126 EEWWTSSLVKNRYLFPYIKGFKSLDTIYLDTTFAY 160
>gi|324521179|gb|ADY47798.1| Protein artemis, partial [Ascaris suum]
Length = 336
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 468 QKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF-SEEMASMSVLQTCP--- 523
+ ++ D+T ++A HCPGSI+IL E GK VL+TGDFRF ++ S +L+ P
Sbjct: 114 KSNSLNAADITFIDAKHCPGSIMILLEFDRGKRVLYTGDFRFVKDDWLSCKILRD-PENS 172
Query: 524 -----IHTLILDTTYCNPLYDF--PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKER 576
I L D+T+C + ++++ + FV + P+ LI S G E
Sbjct: 173 STFKRIDELYFDSTFCRRGSEVIPSRKQSGVLFVRMVKEWLDARPENKVLIWSSNYGHEF 232
Query: 577 LFLEVARVLRKKIYVNAAKFRV 598
L + L + +V KFR+
Sbjct: 233 LLRALFDELNVQTHVTMQKFRI 254
>gi|302507780|ref|XP_003015851.1| DNA repair protein, putative [Arthroderma benhamiae CBS 112371]
gi|291179419|gb|EFE35206.1| DNA repair protein, putative [Arthroderma benhamiae CBS 112371]
Length = 751
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 43/182 (23%)
Query: 461 LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR------- 508
L+ +PL T I I VT +ANHCPGS++ L E +GKA+L+TGD R
Sbjct: 22 LRPIPLQVPTEIELMPGNTIRVTLFDANHCPGSVMFLIE-GDGKAILYTGDIRGKATITQ 80
Query: 509 ----FSEE--MASMSVLQTCPIHTLI--------------LDTTYCNPLYD--------F 540
+S + ++S+ ++ + +LI LDT Y + + F
Sbjct: 81 AYRLYSRSVFLLTVSLAESWWVQSLIRNPVLIPYTMGDRRLDTIYLDTTFATKSDIHQVF 140
Query: 541 PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK 600
P + I+ ++ I+ + T+F + S+T G E ++L ++ L KI+V+ ++R+
Sbjct: 141 PSKAEGIRELLSKIKG--YPEDTIFYLRSWTFGYEDVWLALSAALGTKIHVDRYQYRLYN 198
Query: 601 CL 602
L
Sbjct: 199 SL 200
>gi|433639113|ref|YP_007284873.1| hypothetical protein Halru_2151 [Halovivax ruber XH-70]
gi|433290917|gb|AGB16740.1| hypothetical protein Halru_2151 [Halovivax ruber XH-70]
Length = 335
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
++H H DH T S G + CS TA + + G+ +D + P V
Sbjct: 33 VSHAHADH----TFSSSPGTVVCSAETAAIATARTGVEFDSVSAAP----------GVEL 78
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ--TCPIHTLILDTTYCNPL 537
+ A H GS + E G +TGDF + + A + + L+++TTY +P
Sbjct: 79 VPAGHVVGSRAAVIEAAGGTRYCYTGDFS-TRDRAYLEGFDPAALDVDVLVMETTYGHPR 137
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAAKF 596
Y FP Q + + + I+ P LFL G Y++G+ ++L A ++I V+
Sbjct: 138 YRFPDQAELEASIHDWIRDHPDQP--LFLFG-YSLGRAQKLQWLAAEATDRRILVSRTID 194
Query: 597 RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG 656
V + ++ S DI + + I + L + + SNQ R I A +
Sbjct: 195 EVNRAIE-SSTDIGFAGESVDAGSISELQPAALTD-EIVVVPSNQ--SRRDWIDAIAD-- 248
Query: 657 WTFSKGKKKSPGRRW--QQGTIIR--YEV--PYSEHCSFTELKEFVKFVSPEHI 704
G K+ W + + R Y+V P ++HC F EL E V+ + PE +
Sbjct: 249 ---ETGALKAGFSGWAVEDSFLYRGDYDVTFPLTDHCDFDELIETVRSIDPELV 299
>gi|124027984|ref|YP_001013304.1| hypothetical protein Hbut_1119 [Hyperthermus butylicus DSM 5456]
gi|123978678|gb|ABM80959.1| conserved crenarchaeal protein [Hyperthermus butylicus DSM 5456]
Length = 333
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 34/303 (11%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCS--LITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDV 477
+TH H DH L+RS + + + L L + IP + +P+ K + +
Sbjct: 35 VTHIHSDHLLDLSRSIRYAEFIAATPLTLDLLGALGHRIPEHKKLPMPIGMKVQVDDGVL 94
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
+ A H PGS ++FE A +TGDF+ + +L+ + L++D TY P
Sbjct: 95 RLVRARHIPGSASVVFESSEFSAG-YTGDFK----LPGTDILRGLDV--LVIDATYGLPE 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIY-VNAAKF 596
+ P QE I +++ I + + I +Y E + L + + Y V +
Sbjct: 148 WVRPWQEE-IDYLLADIVLDELRKGSPVHIYAYNGKIEEVMLLLREMGVDAPYLVGVRHY 206
Query: 597 RVLKCLD---FSKEDIQWFTTNEHESHIHVMPMWTLAS---FKRLKHMSNQYAGRFSLIV 650
RVL+ L+ + D+ ++ E W + + R H + V
Sbjct: 207 RVLRVLEKHGYRIGDVVLESSREG---------WEVKRSRWYIRFSHYNGWRHSNGRDAV 257
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
TGW FS+ P +R +I V +S+H F++L E+VK P+ ++
Sbjct: 258 HILLTGWEFSE-----PYKRLSTNRLI---VSFSDHADFSQLVEYVKEAKPKLLLVDSYR 309
Query: 711 DGR 713
GR
Sbjct: 310 GGR 312
>gi|402590918|gb|EJW84848.1| hypothetical protein WUBG_04239 [Wuchereria bancrofti]
Length = 335
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 40/231 (17%)
Query: 416 SHWFLTHFHMDHYQGLTRSFHHGKI-------YCSLITARLVNMKIGIPWDRLQVLP--L 466
S +FL+H H DH GL + I YC I+ + + ++P
Sbjct: 27 SAFFLSHCHSDHMHGLDDDQFYKLIKGKFAVFYCHKISKIFLGSEPHYARLLEHIVPKNY 86
Query: 467 NQKTTIAGI---------------DVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
N+K T+ I DVT L+A H PGSI+ILFE +G +L+TGD+R S+
Sbjct: 87 NEKFTVTAICDNEERESLLPSSSADVTFLDAQHIPGSIMILFEFHDGFRLLYTGDYRLSK 146
Query: 512 EMASMSVLQTCP--------IHTLILDTTYC-NPLYDFP--KQEAV--IQFVIEAIQAES 558
+ + P + L D+T+C + P KQ ++ V E ++ +
Sbjct: 147 DDWIACDMLKDPYASSGFKRLDALYFDSTFCRRGAENIPSLKQSCALCVKMVKEWLEKD- 205
Query: 559 FNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDI 609
P LI G E L + L K +V K+RV +DF E I
Sbjct: 206 --PDNKVLIWCGRFGHELLLKAIWDELHLKCHVTMMKYRVYSKIDFLAECI 254
>gi|448323405|ref|ZP_21512867.1| mRNA 3'-end processing factor [Natronococcus amylolyticus DSM
10524]
gi|445599897|gb|ELY53919.1| mRNA 3'-end processing factor [Natronococcus amylolyticus DSM
10524]
Length = 329
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 119/290 (41%), Gaps = 38/290 (13%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
L+H H DH L R G + CS +TA L R + PL ++TT +D+
Sbjct: 34 LSHAHGDH---LYRE-DPGAVICSDVTAALART-------RREDTPL-ERTTHPAVDLH- 80
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDF----RFSEEMASMSVLQTCPIHTLILDTTYCN 535
+A H PGS +G +TGD RF E + + L+++ TY
Sbjct: 81 -DAGHVPGSRATHITDPDGTTYCYTGDCSTRDRFYLEGFDPNSVDA---DVLVIEATYGE 136
Query: 536 PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAA 594
P Y P QE V +++ ++ P LF YT+G+ + L L V R R +++V A
Sbjct: 137 PEYVLPPQETVEAEIVDWLEDTDDRPVLLF---GYTLGRVQELQLLVNRSSRDRLFVTQA 193
Query: 595 KFRVLKCLDFSKEDIQWFTTN-EHESHIHVMPMWTLAS-FKRLKHMSNQYAGRFSLIVAF 652
R+ ++ DI + E+ + L S +L + ++ F
Sbjct: 194 TERINAVVE-DHYDIDFGARRYRDETELGAGDALILPSQTSKLSFVDALVRDADAIKAGF 252
Query: 653 SPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPE 702
S GW + +Q P S+HC FTEL + V+ V P+
Sbjct: 253 S--GWAINDS--------FQYRGDYDATFPLSDHCDFTELVDVVRGVDPD 292
>gi|357464661|ref|XP_003602612.1| DNA cross-link repair 1B protein [Medicago truncatula]
gi|355491660|gb|AES72863.1| DNA cross-link repair 1B protein [Medicago truncatula]
Length = 571
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 42/235 (17%)
Query: 400 GTPFRVDAFK-YLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
G PF VD + + H F+TH H DH +T SL L+ +
Sbjct: 8 GLPFSVDTWTPSSKISKRHHFITHAHKDHSSNITSHSSFPIYSTSLTKTLLLQHHPQLDA 67
Query: 459 DRLQVLPLNQKTTIAGID----VTCLEANHCPG-------------------------SI 489
V+ + Q + D VT +ANHCPG ++
Sbjct: 68 SLFLVIEVGQSLIVDDPDGNFTVTAFDANHCPGNFFLSNSYNQFLHLYFHSTMDDFEWAV 127
Query: 490 IILFEPQNGKAVLHTGDFRFSEE---------MASMSVLQTCPIHTLILDTTYCNPLYDF 540
+ LFE + G +LHTGD R + E + + CP+ + LD T+ +
Sbjct: 128 MFLFEGKFGN-ILHTGDCRLTLECLFNLPVKYVGTKGKKPRCPLDCVFLDCTFGDFARAM 186
Query: 541 PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK 595
P + + IQ V+ I + T++L +G+E + ++V++ KIYV+ A+
Sbjct: 187 PTKHSSIQQVVNCIWKHP-DASTVYLTCD-ILGQEDILVQVSQTFGAKIYVDKAQ 239
>gi|347523621|ref|YP_004781191.1| hypothetical protein Pyrfu_1071 [Pyrolobus fumarii 1A]
gi|343460503|gb|AEM38939.1| hypothetical protein Pyrfu_1071 [Pyrolobus fumarii 1A]
Length = 336
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 125/311 (40%), Gaps = 38/311 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCS--LITARLVNMKIGIPWDRLQVLPLNQ--KTTIAG 474
+TH H+DH G+ S + L L + IP R + LPL +T + G
Sbjct: 38 IVTHAHVDHLVGMRESLRETPFIAATPLTLEMLPELGYRIP--RAKQLPLAHHIETELMG 95
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
V L ANH PG+ +L E ++G V +TGDF+ V++ + L+++ TY
Sbjct: 96 YRVKLLPANHIPGAAQVLVEWEDGFRVGYTGDFK----QPGTPVMKDLDV--LVIEATYG 149
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGS-YTIGKERLFLEVARVLRKK----I 589
P + P IE I A+ + L + G Y E R+LR++
Sbjct: 150 RPEHRRPW-----SMEIEYIFADLV--RDLLVKGPVYIYAYHGKLQEAMRILREQGIDAP 202
Query: 590 YVNAAK-FRVLKCLDFSKEDIQWFTTNEHESHIHVM-PMWTLASFKRLKHMSNQYAGRFS 647
++ +K +R+ + D+ E VM W + HM N+ G
Sbjct: 203 FIAPSKVYRIALIVKKHGIDVGEVLLAESREAKEVMRDGW----YIYFTHMMNRRNGAPP 258
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
+GW FS +++ R W V S+H F +L E+V+ P+ ++
Sbjct: 259 TAQRVILSGWEFSGPYRQAGTRTWI--------VSLSDHADFDQLVEYVQEAKPKLVVVD 310
Query: 708 VNNDGRDSANA 718
+G A A
Sbjct: 311 AYREGSSEAFA 321
>gi|302890313|ref|XP_003044041.1| hypothetical protein NECHADRAFT_13421 [Nectria haematococca mpVI
77-13-4]
gi|256724960|gb|EEU38328.1| hypothetical protein NECHADRAFT_13421 [Nectria haematococca mpVI
77-13-4]
Length = 476
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 20/157 (12%)
Query: 461 LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSE 511
L+ LPL TTI I VT +ANHCPG+++ L E + KA+L+TGD R F
Sbjct: 59 LKPLPLETPTTIELRPGCEIQVTLFDANHCPGAVMFLIE-NDTKAILYTGDIRSEPWFVN 117
Query: 512 EMASMSVL--QTCPIHTL---ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK-TLF 565
M+ L T + TL LDT++ D P Q Q + E ++ + P T+F
Sbjct: 118 TMSRNPNLVEYTSGLKTLDKIYLDTSFTE---DVPFQTKA-QGIAELLRKVAKYPSDTVF 173
Query: 566 LIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
++T G E +++ +++ L+ +++V+ K R+ L
Sbjct: 174 HFQAWTYGYEDVWVALSKALKSQVHVDDYKLRIYGSL 210
>gi|147788138|emb|CAN67061.1| hypothetical protein VITISV_017538 [Vitis vinifera]
Length = 1066
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 12/127 (9%)
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE---------MASMSVLQTCPIHTL 527
VT +ANHCPG+++ LFE G +LHTGD R E + C +
Sbjct: 603 VTAFDANHCPGAVMFLFEGDFGN-ILHTGDCRLIPECLQNLPQKYVTKKGKEPKCQFDYV 661
Query: 528 ILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRK 587
LD T+ P + IQ VI I P + + S +G+E + + V+R+
Sbjct: 662 FLDCTFGRSSLHIPSKHLAIQQVINCIWKHPDAP--IVYLCSDMLGQEEILINVSRIFGS 719
Query: 588 KIYVNAA 594
KI+V+ A
Sbjct: 720 KIFVDKA 726
>gi|407701672|ref|YP_006826459.1| RNA procession exonuclease-like protein [Alteromonas macleodii str.
'Black Sea 11']
gi|407250819|gb|AFT80004.1| RNA procession exonuclease-like protein [Alteromonas macleodii str.
'Black Sea 11']
Length = 338
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 138/323 (42%), Gaps = 52/323 (16%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + S +TH H DH R+ HH +Y S T ++ + G
Sbjct: 16 CEPGQ-FYIDPMN----EVSTALVTHGHADH----ARAGHH-SVYASAETLAIMKTRYGD 65
Query: 457 PWDRLQ-VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
Q + L + T + VT A H GS IL E G V+ +GD++ + +
Sbjct: 66 DMASQQHAVTLGESVTFNDVKVTFFPAGHILGSTQILIE-YAGYRVVVSGDYKRRHD-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK- 574
+ P LI + T+ P++ P E I+ ++ +++ P L+G+Y +GK
Sbjct: 124 CPPFEVVPCDVLITEATFGLPVFKHPPIEHEIEKLLHSLRV---FPDRCHLVGAYALGKC 180
Query: 575 ERLFLEVARV-LRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
+R+ L + K IY++ A+ LK D ++ IH+ P+ ++ +
Sbjct: 181 QRVILALREARYEKPIYLHGAQ---LKLCDLYEQ-----------LGIHLGPLIPVSEVE 226
Query: 634 RLKHMSNQ--------YAGRFSL----IVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEV 681
K ++ + A R+S + +GW + + K R + II
Sbjct: 227 NKKTLAGEIVIAPPSALADRWSRSLPNVRPVVASGWMQIRARAKQ--RNAELPLII---- 280
Query: 682 PYSEHCSFTELKEFVKFVSPEHI 704
S+HC + EL + ++ V+P+ +
Sbjct: 281 --SDHCDWPELLQTIEEVNPKEV 301
>gi|148675983|gb|EDL07930.1| DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae), isoform
CRA_c [Mus musculus]
Length = 595
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 110/234 (47%), Gaps = 30/234 (12%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E + M +L + I ++ LDTT+C+P Y P +E
Sbjct: 12 FLFQGSNG-TVLYTGDFRLAKGEASRMELLHSGGRVKDIQSVYLDTTFCDPRFYQIPSRE 70
Query: 545 AVIQFVIEAIQA-ESFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
++ ++E +++ + +P ++L G E LF ++ L +++V+ K + K +
Sbjct: 71 QCLRGILELVRSWVTRSPHHVVWLNCKAAYGYEYLFTNLSEELGVQVHVD--KLDMFKNM 128
Query: 603 DFSKEDIQWFTTNEHESHIHVMP--------MWTLASFKRLKHMSNQYAGRFSLIVAFSP 654
DI T + + IH W K +++Q I
Sbjct: 129 ----PDILHHLTTDRNTQIHACRHPKAEECFQWN----KLPCGITSQNKTALHTISIKPS 180
Query: 655 TGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
T W + +K + R + + Y +S H SF+E+K+F+ ++ P ++ P+V
Sbjct: 181 TMWFGERTRKTNVIVRTGESS---YRACFSFHSSFSEIKDFLSYICPVNVYPNV 231
>gi|169622121|ref|XP_001804470.1| hypothetical protein SNOG_14275 [Phaeosphaeria nodorum SN15]
gi|160704700|gb|EAT78512.2| hypothetical protein SNOG_14275 [Phaeosphaeria nodorum SN15]
Length = 467
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 25/166 (15%)
Query: 464 LPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
LPL+ TTI I VT ++ANHC G+++ L E +G+AVL+TGD R +E S+
Sbjct: 8 LPLDTPTTIELAPSNSIRVTLIDANHCIGAVMFLIEG-DGQAVLYTGDIR-AETWWVNSL 65
Query: 519 LQTCPI---HTL--------ILDTTYCN---PLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
+Q P+ +TL LDTT+ P +FP + I +++ + ++ T+
Sbjct: 66 VQN-PVLLPYTLGKRRLDCMYLDTTFATKHEPYREFPSKAEGINELLDKV--SQYSHDTI 122
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQ 610
F S+T G E ++L ++ L +I++++ + + L + E IQ
Sbjct: 123 FYFHSWTFGYENVWLALSVFLESQIHLDSYRAGIYGSLS-TLEKIQ 167
>gi|386854313|ref|YP_006258693.1| Beta-lactamase domain protein [Deinococcus gobiensis I-0]
gi|380002642|gb|AFD27829.1| Beta-lactamase domain protein [Deinococcus gobiensis I-0]
Length = 541
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 33/196 (16%)
Query: 420 LTHFHMDHYQGL---TRSFHHGKIYCSLITARLVNMKI----------GIPW-------- 458
LTH H+DH G+ R F +IYC+ TAR+ + + G P
Sbjct: 58 LTHAHLDHVAGIPVVIRRFPDLRIYCTEATARIAGLVLADTLKVSTEQGFPMFSPEELKR 117
Query: 459 --DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEE---M 513
+RL +P Q+ + G T + H G+ +L E G++V HTGD +
Sbjct: 118 TLERLHPIPYFQRVSDHGFAFTLFPSGHLLGAASVLIE-SGGRSVFHTGDVSNVDTPVVN 176
Query: 514 ASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIG 573
A+ Q P+ ++ ++TY + L P ++ ++ + AI E+ LI S+ +G
Sbjct: 177 AAWLPAQVTPVDAVVSESTYGDTL--LPSRKEQVRTFVAAI-GETLRAGGKVLIPSFALG 233
Query: 574 KERLFLEVARVLRKKI 589
+ + E+ ++L+ +
Sbjct: 234 RAQ---EITQILQTGM 246
>gi|110632393|ref|YP_672601.1| putative mRNA 3-end processing factor [Chelativorans sp. BNC1]
gi|110283377|gb|ABG61436.1| putative mRNA 3-end processing factor [Chelativorans sp. BNC1]
Length = 334
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
P C P F +D + +TH H DH + HG + + T ++ +
Sbjct: 9 PQGLCCPEGGFFIDPVR----PVERALITHGHSDHARA-----GHGAVLATRETLDIMAL 59
Query: 453 KIGIPW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
+ G + Q + L + TI G+ VT A H GS I E NG ++ +GD++ S
Sbjct: 60 RYGPGFAGSTQEIGLGETVTIGGVAVTFHPAGHVLGSAQICVE-ANGTRIVASGDYKRSP 118
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ S + P I + T+ P++ P+ I ++++++ P+ ++G+YT
Sbjct: 119 DPTCAS-FEPIPCDIFITEATFALPVFTHPQASHEIGHLLKSVRQ---FPERTHIVGAYT 174
Query: 572 IGKERLFLEVAR--VLRKKIYVNAA 594
+GK + + + R + IY++ A
Sbjct: 175 LGKAQRVIALLREAGYNEPIYIHGA 199
>gi|255725608|ref|XP_002547733.1| hypothetical protein CTRG_02040 [Candida tropicalis MYA-3404]
gi|240135624|gb|EER35178.1| hypothetical protein CTRG_02040 [Candida tropicalis MYA-3404]
Length = 575
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK----IGIPWDRLQVL--PLNQKTT 471
+ LTH H DH QGL ++YCSL+T ++ ++ +P+ + P +T+
Sbjct: 29 FLLTHSHQDHLQGLLNKSFCNRVYCSLLTKCIIALEDKYSTVLPYLVAKEYNEPFEIETS 88
Query: 472 IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTL---- 527
+ VT + + HCPGS++ L E + KAVL TGD R AS + T +
Sbjct: 89 QCKLTVTLIPSYHCPGSVMFLLEGID-KAVLATGDIRAESWWASTLIKNTYLFPYITGLK 147
Query: 528 ILDTTYCNPLYDF---------PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
+LD Y + + + P E + +E ++ + + F+ G E +
Sbjct: 148 VLDQIYIDTTFTYRGEPYISIMPNSEGIFA-AMELLKLYPVDDEIQFMFVDSVSGSEEAW 206
Query: 579 LEVARVLRKKIYVN 592
++A ++ N
Sbjct: 207 FQIANYFDSELRAN 220
>gi|408788627|ref|ZP_11200344.1| mRNA 3-end processing factor [Rhizobium lupini HPC(L)]
gi|408485443|gb|EKJ93780.1| mRNA 3-end processing factor [Rhizobium lupini HPC(L)]
Length = 336
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 132/298 (44%), Gaps = 40/298 (13%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T ++ ++ G + Q + ++ + G+ V
Sbjct: 33 LITHGHSDHARA-----GHGAVLATRQTLDIMRIRYGEDFCGSEQAVAFGERVEVNGVTV 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E NG ++ +GD++ + + + +T P I + T+ P+
Sbjct: 88 GFHPAGHVLGSAQISVE-MNGMRIVASGDYKRGID-PTCAPFETVPCDVFITEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR-----KKIYVN 592
+ P ++ +I+ P+ L+G+Y++GK + V R+LR + IY++
Sbjct: 146 FHHPLPRVETAKLLTSIKQ---FPERTHLVGAYSLGKAQ---RVIRLLRDNGYAEPIYIH 199
Query: 593 AAKFR-----VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
A R V + +D ++ + + + ++F+ ++A RF+
Sbjct: 200 GALARLCDYYVSQGIDLGDLRPATLEKSDPSAFKGAIVVGPPSAFQ------ERWARRFN 253
Query: 648 -LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
++AF+ +GW + + K G + + S+HC + EL E +K +SP+ +
Sbjct: 254 EPLIAFA-SGWMMVRQRAKQGG--------VELPLVISDHCDWPELLETIKEISPQAV 302
>gi|238577395|ref|XP_002388375.1| hypothetical protein MPER_12610 [Moniliophthora perniciosa FA553]
gi|215449605|gb|EEB89305.1| hypothetical protein MPER_12610 [Moniliophthora perniciosa FA553]
Length = 188
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 26/155 (16%)
Query: 588 KIYVNAAKFRVLKCL-DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRF 646
+IY ++ K +L+C D E + TTN ++ +H++P+ + S K LK +++ G F
Sbjct: 6 RIYCDSRKAAILRCENDLELEGM--LTTNPKDASVHLVPLGVIVSDK-LKEYLDRWKGHF 62
Query: 647 SLIVAFSPTGWTFSK--GKKKSPG--------------------RRWQQGTIIRYEVPYS 684
+ +V F PTGWT++ G P R + Y VPYS
Sbjct: 63 THVVGFRPTGWTYTAPAGTDTLPSISSVIARAQKINYTYVDLQPSRQSTKEVEVYPVPYS 122
Query: 685 EHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
EH SF EL F V II +VN S M
Sbjct: 123 EHSSFFELTCFAMSVEWGRIIATVNVGSEKSRGKM 157
>gi|312382374|gb|EFR27857.1| hypothetical protein AND_04964 [Anopheles darlingi]
Length = 260
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 9/121 (7%)
Query: 588 KIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
K++ +++ L + + + + ++IHV+ M L S+ L +Q+ R+
Sbjct: 2 KVWTEPNRWKALSAI-ADPDQLSLLVADPVAANIHVLAMNKL-SYDELNDYMSQFPDRYD 59
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
++A P+GW +K+ +W+ G I + YSEH SF ELK FV+F+ P +I +
Sbjct: 60 TVIALRPSGW------EKNSKPQWR-GRINIVGIEYSEHSSFDELKRFVQFIRPREVIST 112
Query: 708 V 708
V
Sbjct: 113 V 113
>gi|325292218|ref|YP_004278082.1| mRNA 3-end processing factor [Agrobacterium sp. H13-3]
gi|325060071|gb|ADY63762.1| putative mRNA 3-end processing factor [Agrobacterium sp. H13-3]
Length = 338
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 47/321 (14%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + + +TH H DH + HG + + T ++ ++ G
Sbjct: 18 CPPGD-FYIDPVR----PVARALITHGHSDHARA-----GHGAVLATRQTLDIMRIRYGE 67
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ Q + + + G+ V A H GS I E NG ++ +GD++ + +
Sbjct: 68 DFCGSEQAVAFGETVEVNGVTVGFHPAGHVLGSAQISVE-MNGMRIVASGDYKRGID-PT 125
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ +T P I + T+ P++ P I ++ +I+ P+ L+G+Y++GK
Sbjct: 126 CTPFETVPCDVFITEATFGLPVFHHPLPRVEIGKLLTSIKQ---FPERTHLVGAYSLGKA 182
Query: 576 RLFLEVARVLRKK-----IYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+ V R+LR IY++ A R+ C + + I + + H + A
Sbjct: 183 Q---RVIRLLRDNGYADPIYIHGALARL--CDYYVSQGI-----DLGDLHPATLEKSDPA 232
Query: 631 SFKRL------KHMSNQYAGRFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY 683
FK ++A RF+ ++AF+ +GW + + K G + +
Sbjct: 233 IFKGAIVVGPPSAFQERWARRFNEPLIAFA-SGWMMVRQRAKQGG--------VELPLVI 283
Query: 684 SEHCSFTELKEFVKFVSPEHI 704
S+HC + EL E +K + P+ +
Sbjct: 284 SDHCDWPELLETIKEIGPQAV 304
>gi|424814154|ref|ZP_18239332.1| hypothetical protein J07AB43_10160 [Candidatus Nanosalina sp.
J07AB43]
gi|339757770|gb|EGQ43027.1| hypothetical protein J07AB43_10160 [Candidatus Nanosalina sp.
J07AB43]
Length = 323
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 126/299 (42%), Gaps = 56/299 (18%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
++H H DH +RS ++ CS +TA+L + G DRL+ D+
Sbjct: 31 VSHAHFDHLH-QSRS----QVVCSELTAKLTEARTGEEVDRLEEH-----------DIKL 74
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYD 539
+ + H GS LF + K L+TGD + A + L++++TY P Y
Sbjct: 75 IPSGHILGSTAALFGGE--KKYLYTGDVSM-RKTAYLDGFNPVSADALVVESTYGVPAYT 131
Query: 540 FPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAAKFRV 598
FP Q+ V + IQ P L+L G Y++GK +++ + V+ + + + A ++
Sbjct: 132 FPDQKEVESRIKNFIQDNRDQP--LYLFG-YSLGKAQKIQKIIESVVERPVLAHGAVKKM 188
Query: 599 LKCL-DFSKEDIQWFTTNEH------ESHIHVMPM------WTLASFKRLKHMSNQYAGR 645
+ +++ Q + E+ E+ + V P W + +R Y G
Sbjct: 189 NDAVEEYTGVSFQAESYGENKQKLEDENAVLVAPSRSSQADWIDKNVER-------YGG- 240
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
L FS GW K G + + ++ S+HC F EL E V+ V PE +
Sbjct: 241 --LKAGFS--GWAAQSSFKFRGG--YDETFVL------SDHCDFNELLELVRQVDPEEV 287
>gi|294658312|ref|XP_460642.2| DEHA2F06534p [Debaryomyces hansenii CBS767]
gi|202953037|emb|CAG88974.2| DEHA2F06534p [Debaryomyces hansenii CBS767]
Length = 783
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 84/208 (40%), Gaps = 27/208 (12%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKT----TIA 473
+ LTH H DH GL +YCS T +LV + ++P+ T+
Sbjct: 35 YLLTHCHTDHLCGLRNKSFDSIVYCSETTKKLVALDPSFRHVLPFIIPIETNVPFTITLN 94
Query: 474 G--IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP-------- 523
G I +T + A HCPG+ + L E K +L+TGD R E + L CP
Sbjct: 95 GEEITMTLIPAYHCPGATMFLLEGAT-KNILYTGDIR--AESWWVETLSKCPSLFPYTAG 151
Query: 524 ---IHTLILDTTYC---NPLYDFPKQEAVIQFVIEAIQAESF-NPKTLFLIGSYTIGKER 576
+ + LDTT+ P + P I V I++ +P F T G E
Sbjct: 152 LKVLDNIYLDTTFIYRGEPFIEIPSNNEGISVVTSLIKSYPRDDPDVQFYFVDSTSGFEE 211
Query: 577 LFLEVARVLRKKIYV---NAAKFRVLKC 601
+ ++A L+ ++ N + L C
Sbjct: 212 AWAQIANSLQGTLHTSEENKLRIESLDC 239
>gi|417859194|ref|ZP_12504251.1| hypothetical protein Agau_C102311 [Agrobacterium tumefaciens F2]
gi|338825198|gb|EGP59165.1| hypothetical protein Agau_C102311 [Agrobacterium tumefaciens F2]
Length = 338
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 138/323 (42%), Gaps = 51/323 (15%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + + +TH H DH + HG + + T ++ ++ G
Sbjct: 18 CPPGD-FYIDPVR----PVARALITHGHSDHARA-----GHGSVLATRQTLDIMRIRYGE 67
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ Q + + + G+ V A H GS I E NG ++ +GD++ + +
Sbjct: 68 DFCGSEQAVAFGETVEVNGVTVGFHPAGHVLGSAQISVE-MNGMRIVASGDYKRGID-PT 125
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ +T P I + T+ P++ P I ++ +I+ P+ L+G+Y++GK
Sbjct: 126 CTPFETVPCDVFITEATFGLPVFHHPLPRVEIGKLLTSIRQ---FPERTHLVGAYSLGKA 182
Query: 576 RLFLEVARVLRKK-----IYVNAAKFRV--------LKCLDFSKEDIQWFTTNEHESHIH 622
+ V R+LR IY++ A R+ + D ++ + I
Sbjct: 183 Q---RVIRLLRDNGYADPIYIHGALARLCDYYVSQGIDLGDLRPATLEKSNPAAFKGAIV 239
Query: 623 VMPMWTLASFKRLKHMSNQYAGRFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEV 681
V P ++F+ ++A RF+ ++AF+ +GW + + K G + +
Sbjct: 240 VGPP---SAFQ------ERWARRFNEPLIAFA-SGWMMVRQRAKQGG--------VELPL 281
Query: 682 PYSEHCSFTELKEFVKFVSPEHI 704
S+HC + EL E +K + P+ +
Sbjct: 282 VISDHCDWPELLETIKEIGPQAV 304
>gi|407689385|ref|YP_006804558.1| RNA procession exonuclease-like protein [Alteromonas macleodii str.
'Balearic Sea AD45']
gi|407292765|gb|AFT97077.1| RNA procession exonuclease-like protein [Alteromonas macleodii str.
'Balearic Sea AD45']
Length = 338
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 139/323 (43%), Gaps = 52/323 (16%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + + +TH H DH R+ HH +Y S T ++ + G
Sbjct: 16 CEPGE-FYIDPMN----EVATALVTHGHADH----ARAGHH-SVYASAETLAIMKTRYGD 65
Query: 457 PWDRLQ-VLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
Q + L + T + VT A H GS IL E G V+ +GD++ + +
Sbjct: 66 DMASQQHAVTLGESVTFNDVKVTFFPAGHILGSTQILIE-YAGYRVVVSGDYKRRHD-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK- 574
+ P LI + T+ P++ P E I+ ++ +++ P+ L+G+Y +GK
Sbjct: 124 CPPFEVVPCDVLITEATFGLPVFKHPPIEHEIEKLLHSLRV---FPERCHLVGAYALGKC 180
Query: 575 ERLFLEVARV-LRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
+R+ L + K IY++ A+ LK D ++ IH+ P+ ++ +
Sbjct: 181 QRVILALREAGYEKPIYLHGAQ---LKLCDLYEQ-----------LGIHLGPLIPVSEVE 226
Query: 634 RLKHMSNQ--------YAGRFSL----IVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEV 681
K ++ + A R+S + +GW + + K R + II
Sbjct: 227 DKKTLAGEIVIAPPSALADRWSRSLPNVRPVMASGWMQIRARAKQ--RNAELPLII---- 280
Query: 682 PYSEHCSFTELKEFVKFVSPEHI 704
S+HC + EL + ++ V+P+ +
Sbjct: 281 --SDHCDWPELLQTIEEVNPKEV 301
>gi|238486418|ref|XP_002374447.1| DNA repair protein, putative [Aspergillus flavus NRRL3357]
gi|220699326|gb|EED55665.1| DNA repair protein, putative [Aspergillus flavus NRRL3357]
Length = 738
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 461 LQVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSE 511
L+ +PLN T I I VT L+ANHC G+++ L E +GK++L+TGD R + +
Sbjct: 22 LRPIPLNTPTEIELTPRLSIRVTLLDANHCTGAVMFLIE-GSGKSILYTGDIRAESWWVD 80
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLY--------DFPKQEAVIQFVIEAIQAESFNPKT 563
+ VL + LD Y + + FP + + +++ + S++ T
Sbjct: 81 SLIRHPVLIPYTLGGRRLDKIYLDSTFARHSSIYRTFPSKANGLAELLQKVA--SYSEDT 138
Query: 564 LFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
F ++T G E +++ ++ L KI+V+ + + + L
Sbjct: 139 TFYFRAWTFGYEEVWMALSAALNSKIHVDRYQIGLYRSL 177
>gi|344228979|gb|EGV60865.1| hypothetical protein CANTEDRAFT_110826 [Candida tenuis ATCC 10573]
Length = 435
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 154/365 (42%), Gaps = 62/365 (16%)
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM-KIGIPWDR-LQVLPLNQKTT 471
D + L+H H DH GL +YCS +T ++ ++ PW R L+ + N +
Sbjct: 24 DAKIFLLSHCHSDHLVGLANKSFQSTVYCSELTKQIFSLDNRNAPWLRYLRGIAFNSPFS 83
Query: 472 IAGID----VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ------- 520
I D +T + A HCPGS + L E + K VL TGD R +E +M + +
Sbjct: 84 IILNDKKVVLTLISAYHCPGSAMFLVESEE-KNVLFTGDIR-AETWWTMGLKKNMYLFPY 141
Query: 521 TCPIHTL---ILDTTYC---NPLYDFPKQEAVIQFVIEAIQAE-SFNPKTLFLIGSYTIG 573
TC +L LDTT+ P + P I I+ + + +P F +T+G
Sbjct: 142 TCGFKSLDCIYLDTTFGYRREPYIEIPPNTDGIAAAIKMLSLYPTDDPDIEFFFADHTLG 201
Query: 574 KERLFLEVA-----------RVLRKKIYV----NAAKFR-VLKCLD-------------F 604
E+ + + R+L++ + V N + VL D F
Sbjct: 202 FEQAWSMIVSSLGGSMHMSNRILQRSVVVSKNPNCETYESVLGHFDTNGGQKFHACEEGF 261
Query: 605 SKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL-IVAFSPTGWTFSKGK 663
+ +++ + +++V+ +K ++++ G+ + +V ++ G + +
Sbjct: 262 CSQKVKFPVRIKQCINLNVIDFVGCLLPVDMKTLTDK--GKQGIQVVDYTTKGNAIVRYR 319
Query: 664 KKSPGRRWQQ--GTIIRYEVP--YSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSANAM 719
GR W Q ++ E+ +S H S++E KEFVK +P + P V + G +
Sbjct: 320 ----GRTWIQVNNELLPSEIKLVFSRHSSYSECKEFVKTFNPVSVYPCVTSKGTWENGFV 375
Query: 720 VSLLL 724
+S L
Sbjct: 376 MSRLF 380
>gi|290977160|ref|XP_002671306.1| predicted protein [Naegleria gruberi]
gi|284084874|gb|EFC38562.1| predicted protein [Naegleria gruberi]
Length = 921
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%)
Query: 233 DVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
D+ V +L +LGL RY FV+EEID + + LT+ DL +G++ GPRKKIL +I
Sbjct: 575 DIKEVTNWLVNLGLGRYANMFVQEEIDLECIPLLTDTDLFKLGISKFGPRKKILDAAKKI 634
Query: 293 KK 294
K
Sbjct: 635 TK 636
>gi|238883921|gb|EEQ47559.1| hypothetical protein CAWG_06139 [Candida albicans WO-1]
Length = 537
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL--- 461
VD F G + LTH H DH QGL S G++YCS +T +++ + R+
Sbjct: 19 VDKFS---GTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKS--TLELDTRYTRVSRF 73
Query: 462 -QVLPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
V N+ T+ + +T + + HCPGS + L E K VL TGD R +E ++
Sbjct: 74 FNVKEYNETFTVDTLLGKVSITMIPSYHCPGSAMFLLE-SFCKNVLITGDVR-AESWWTL 131
Query: 517 SVLQTCPIHTLI----------LDTTYCNP----LYDFPKQEAVIQFVIEAIQAESFNPK 562
S+++ + I LDTT+ +Y P E + IE ++ F+
Sbjct: 132 SLIKNPHLFPYITGLKTLDQIYLDTTFSYRGEPYIYIMPNSEGIFA-AIELLKLYPFDSD 190
Query: 563 TLFLIGSYTIGKERLFLEVAR 583
F G E + ++ R
Sbjct: 191 LSFTFVDTVSGSEEAWFQIVR 211
>gi|389740175|gb|EIM81366.1| hypothetical protein STEHIDRAFT_171755 [Stereum hirsutum FP-91666
SS1]
Length = 981
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 146/428 (34%), Gaps = 121/428 (28%)
Query: 399 PGTPF---------RVDAFKYLRGDCSH-----WFLTHFHMDHYQGLTRSFHHGKIYCSL 444
PG P+ RVD F D + LTH H DH GL K++CS
Sbjct: 3 PGAPYHGFIRPYSIRVDEFTTPSDDPTFVPPALHLLTHTHSDHLTGLAAKSFASKVWCSH 62
Query: 445 ITARLV------------------NMKIGIPWDRLQV--------------------LPL 466
++ + K+ + L+V +PL
Sbjct: 63 DAKEMLLRLEPYKERKLKDSDIREDKKLAKAYQHLKVSPQVVDGRKDYHGSRDLLHAVPL 122
Query: 467 NQKTT-----IAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDF----RFSEEMASMS 517
N + +A +++T L+ANHCPG+++ L E G +LHTGDF RF +A
Sbjct: 123 NTPISYDMSGLATVNITLLDANHCPGAVMYLVEGSEGN-ILHTGDFRAEPRFLNSIAKNP 181
Query: 518 VLQ---TCPIH---------------------TLILDTTYCNPLYDFPKQEAVIQFVIEA 553
L+ + P H + LDT P + +I
Sbjct: 182 HLRSYLSLPEHVDDLSGASRSGRVTRKGATLDAIYLDTACVWSNIQQPSKAEATNGLISL 241
Query: 554 IQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSK------- 606
++ + T F I S+T G E + + +A +I+ + K + L
Sbjct: 242 MKL--YGATTTFFINSWTWGYEDILIAIAMAFDTRIHADRYKREIYGYLGLKSSSSPARD 299
Query: 607 EDIQW-FTTNEHESHIHVMPMWTL----ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSK 661
DI+ FT + + H + ++ + + +I + S W +K
Sbjct: 300 RDIKHIFTYDPASTRFHACERFDRCEYSPDYRAFEKADGKEGQGAEMIDSESTLDWGMAK 359
Query: 662 GKKKS---------PGRRWQ------QGTIIRYE------VPYSEHCSFTELKEFVKFVS 700
+ +W + ++ R + VP H + EL+ FV+
Sbjct: 360 QRASKVVYINPVDMSAEKWAAYQEEIKASLERGDCVSSLLVPLGRHSALPELQSFVRMFR 419
Query: 701 PEHIIPSV 708
P I+P+
Sbjct: 420 PARIVPNT 427
>gi|300024128|ref|YP_003756739.1| beta-lactamase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525949|gb|ADJ24418.1| beta-lactamase domain protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 339
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 134/314 (42%), Gaps = 35/314 (11%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + +TH H DH RS HG + + T ++ ++ G
Sbjct: 21 CEPGG-FYIDPHR----SVDRAIITHGHSDH----ARS-GHGAVLATHETIEIMKVRYGE 70
Query: 457 P-WDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
Q L L + TI G+ V A H GS ++ E +AV+ +GD++ + + +
Sbjct: 71 NCAGAFQPLKLGEMITINGVGVRLAPAGHILGSAQVVLEWAGKRAVI-SGDYKRATD-PT 128
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + P + + T+ P++ K ++ ++ ++ AE P LIG+Y +GK
Sbjct: 129 CTPFELVPCDVFVTEATFALPVFRHEKAAHEVEKLLGSMAAEPDRPH---LIGAYNLGKC 185
Query: 576 RLFLEVAR--VLRKKIYVNAAKF---RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+ + V R + IY++ A + K L D++ TT + +S + M +
Sbjct: 186 QRMIRVIRDAGYSEPIYLHGAVIALTELYKRLGVDLGDVRPATTEDAKSLSGGIVMCPPS 245
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
+ + ++++ RF V +GW +G+ + G + + S+H +
Sbjct: 246 A------LGDRWSRRFGDPVNAFASGWMRVRGRARQHG--------VELPLVVSDHVDWP 291
Query: 691 ELKEFVKFVSPEHI 704
EL V V E I
Sbjct: 292 ELIATVTDVGAEEI 305
>gi|410214258|gb|JAA04348.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG +L+TGDFR + E A M +L + I ++ LDT C+P Y P +E
Sbjct: 7 FLFQGNNG-TILYTGDFRLVQGEAARMELLHSGGRVKDIQSVYLDTMLCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAESFNPKTLF----LIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVL 599
+ V+E +Q S+ ++L+ L G E LF ++ L +++VN FR +
Sbjct: 66 ECLSGVLELVQ--SWITRSLYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNM 123
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTG 656
+I T + + IH + + + R + I++ P+
Sbjct: 124 P-------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPST 176
Query: 657 WTFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 177 MWFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|227830967|ref|YP_002832747.1| hypothetical protein LS215_2109 [Sulfolobus islandicus L.S.2.15]
gi|227457415|gb|ACP36102.1| conserved hypothetical protein [Sulfolobus islandicus L.S.2.15]
Length = 328
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 31/321 (9%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH-GKIYCSLITAR 448
K +P + G F +D Y R +THFH DH GL +S I + IT
Sbjct: 6 KILPNGAILIGEKFTIDG-HYER---PFRVVTHFHADHIMGLEKSISLCDSIIATPITLD 61
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
++N+ IP + L + K T + +++H GS +L +NG + +TGDF+
Sbjct: 62 ILNLDYAIPPRKAFGLNYDIKMTFDDETIVLKKSDHVIGSAQVLITLKNGLEIGYTGDFK 121
Query: 509 FSEEMASMSVLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
++ T +H LI++ TY P + P ++ V + ++ N
Sbjct: 122 NPDK-------GTPILHPDILIIEATYGKPDFRRPFKDDVESLFADYVRDALMNSPV--R 172
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK--CLDFSKEDIQWFTTNEHESHIHVM 624
I Y + + L + ++ ++ K + + + Q F ++ E+ +
Sbjct: 173 IYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMTNIAIKYGYNISQVFDESQSEAREIMR 232
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
W + SF N++ R F +GW F KK + Y V +S
Sbjct: 233 DDWYI-SFSHY----NEFKRRNGKYFNFLLSGWEFKDVVKKIDEK--------SYAVSFS 279
Query: 685 EHCSFTELKEFVKFVSPEHII 705
+H F +L +V+ S ++II
Sbjct: 280 DHADFDDLIYYVERTSAKYII 300
>gi|241952418|ref|XP_002418931.1| DNA cross-link repair protein, putative [Candida dubliniensis CD36]
gi|223642270|emb|CAX44239.1| DNA cross-link repair protein, putative [Candida dubliniensis CD36]
Length = 569
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 147/343 (42%), Gaps = 48/343 (13%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG-IPWDRL-Q 462
VD F G + LTH H DH QGL + G++YCS +T + + I R +
Sbjct: 19 VDRFN---GTGEVYLLTHCHQDHLQGLLNNSFCGRVYCSALTKSTLELDTRYIHVSRFFK 75
Query: 463 VLPLNQ----KTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
V N+ +T + + +T + + HCPGS + L E + K+VL TGD R +E + S+
Sbjct: 76 VKEYNETFAVETLLGKVTITMIPSYHCPGSSMFLLE-SSTKSVLITGDVR-AESWWTSSL 133
Query: 519 LQTC----------PIHTLILDTTYCNP----LYDFPKQEAVIQFVIEAIQAESFNPKTL 564
++ + L LDTT+ +Y P E + IE ++ F+
Sbjct: 134 IKNPHLFPYITGLRTLDQLYLDTTFSYRGEPYIYIMPNSEGIFA-AIELLKLYPFDSDLS 192
Query: 565 FLIGSYTIGKERLFLEVAR----------VLRKKI--YVNAAKFRVLKCLDFSKEDIQWF 612
F G E ++++AR +L+K+I Y N+ R + S++ +
Sbjct: 193 FSFVDSVSGSEEAWIQIARYFNGSLVTNGMLQKRIELYKNSLNLRY-AVISSSEKSPVFK 251
Query: 613 TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKS---PGR 669
N +S ++ + + + +++ S I S + +K + GR
Sbjct: 252 VGNTPDSTPIIITIKQIINLNAMEYASQFLPRNICEIDLSSASSLVTTKNGHQIYMLDGR 311
Query: 670 RW---QQGT-IIRYEVP--YSEHCSFTELKEFVKFVSPEHIIP 706
+W + G+ ++ +P +S H S+ E + V SP+ + P
Sbjct: 312 KWLLPKGGSEVLPTCIPLMFSRHSSYQESRSLVALFSPKSVYP 354
>gi|227828208|ref|YP_002829988.1| hypothetical protein M1425_1946 [Sulfolobus islandicus M.14.25]
gi|229579845|ref|YP_002838244.1| hypothetical protein YG5714_2068 [Sulfolobus islandicus Y.G.57.14]
gi|229585437|ref|YP_002843939.1| hypothetical protein M1627_2024 [Sulfolobus islandicus M.16.27]
gi|238620399|ref|YP_002915225.1| hypothetical protein M164_1954 [Sulfolobus islandicus M.16.4]
gi|284998455|ref|YP_003420223.1| hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|385776527|ref|YP_005649095.1| exonuclease, beta-lactamase fold, RNA processing-like protein
[Sulfolobus islandicus REY15A]
gi|227460004|gb|ACP38690.1| conserved hypothetical protein [Sulfolobus islandicus M.14.25]
gi|228010560|gb|ACP46322.1| conserved hypothetical protein [Sulfolobus islandicus Y.G.57.14]
gi|228020487|gb|ACP55894.1| conserved hypothetical protein [Sulfolobus islandicus M.16.27]
gi|238381469|gb|ACR42557.1| conserved hypothetical protein [Sulfolobus islandicus M.16.4]
gi|284446351|gb|ADB87853.1| conserved hypothetical protein [Sulfolobus islandicus L.D.8.5]
gi|323475275|gb|ADX85881.1| exonuclease, beta-lactamase fold, RNA processing-like protein
[Sulfolobus islandicus REY15A]
Length = 328
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 31/321 (9%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH-GKIYCSLITAR 448
K +P + G F +D Y R +THFH DH GL +S I + IT
Sbjct: 6 KILPNGAILIGEKFTIDG-HYER---PFRVVTHFHADHIMGLEKSISICDSIIATPITLD 61
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
++N+ IP + L + K T + +++H GS +L +NG + +TGDF+
Sbjct: 62 ILNLDYAIPPRKAFGLNYDIKMTFDDETIVLKKSDHVIGSAQVLITLKNGLEIGYTGDFK 121
Query: 509 FSEEMASMSVLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
++ T +H LI++ TY P + P ++ V + ++ N
Sbjct: 122 NPDK-------GTPILHPDILIIEATYGKPDFRRPFKDDVESLFADYVRDALMNSPV--R 172
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK--CLDFSKEDIQWFTTNEHESHIHVM 624
I Y + + L + ++ ++ K + + + Q F ++ E+ +
Sbjct: 173 IYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMTNIAIKYGYNISQVFDESQSEAREIMR 232
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
W + SF N++ R F +GW F KK + Y V +S
Sbjct: 233 DDWYI-SFSHY----NEFKRRNGKYFNFLLSGWEFKDVVKKIDEK--------SYAVSFS 279
Query: 685 EHCSFTELKEFVKFVSPEHII 705
+H F +L +V+ S ++II
Sbjct: 280 DHADFDDLIYYVERTSAKYII 300
>gi|119576987|gb|EAW56583.1| DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), isoform
CRA_b [Homo sapiens]
Length = 297
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
IHTL LD T CNP P ++ +++ I+ +P+ IG Y++GKE L ++A
Sbjct: 13 IHTLYLDNTNCNPALVLPSRQEAAHQIVQLIRK---HPQHNIKIGLYSLGKESLLEQLAL 69
Query: 584 VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYA 643
+ + ++ + +++ L + D+ FT E IH + + L+ NQ
Sbjct: 70 EFQTWVVLSPRRLELVQLLGLA--DV--FTVEEKAGRIHAVDHMEICHSNMLRW--NQTH 123
Query: 644 GRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
+A PT R+ + +PYS+H S++EL+ FV + P
Sbjct: 124 P----TIAILPTS------------RKIHSSHPDIHVIPYSDHSSYSELRAFVAALKPCQ 167
Query: 704 IIPSVN 709
++P V+
Sbjct: 168 VVPIVS 173
>gi|418406379|ref|ZP_12979698.1| mRNA 3-end processing factor [Agrobacterium tumefaciens 5A]
gi|358006872|gb|EHJ99195.1| mRNA 3-end processing factor [Agrobacterium tumefaciens 5A]
Length = 336
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 138/320 (43%), Gaps = 45/320 (14%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + + +TH H DH + HG + + T ++ ++ G
Sbjct: 16 CPPGD-FYIDPVR----PVARALITHGHSDHARA-----GHGAVLATRQTLDIMRIRYGE 65
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ Q + + + G+ V A H GS I E NG ++ +GD++ + +
Sbjct: 66 DFCGSEQAVAFGETVEVNGVTVGFHPAGHVLGSAQISVE-MNGMRIVASGDYKRGID-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ +T P I + T+ P++ P I ++ +I+ P+ L+G+Y++GK
Sbjct: 124 CTPFETVPCDVFITEATFGLPVFHHPLPRVEIGKLLTSIKQ---FPERTHLVGAYSLGKA 180
Query: 576 RLFLEVARVLRKK-----IYVNAAKFR-----VLKCLDFSKEDIQWFTTNEHESHIHVMP 625
+ V R+LR IY++ A R V + +D + ++ +
Sbjct: 181 Q---RVIRLLRDNGYADPIYIHGALARLCDYYVSQGIDLGELRPATLEKSDPAIFKGAIV 237
Query: 626 MWTLASFKRLKHMSNQYAGRFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
+ ++F+ ++A RF+ ++AF+ +GW + + K G + + S
Sbjct: 238 VGPPSAFQ------ERWARRFNEPLIAFA-SGWMMVRQRAKQGG--------VELPLVIS 282
Query: 685 EHCSFTELKEFVKFVSPEHI 704
+HC + EL E +K + P+ +
Sbjct: 283 DHCDWPELLETIKEIGPQAV 302
>gi|94497593|ref|ZP_01304162.1| hypothetical protein SKA58_08759 [Sphingomonas sp. SKA58]
gi|94423010|gb|EAT08042.1| hypothetical protein SKA58_08759 [Sphingomonas sp. SKA58]
Length = 330
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 120/291 (41%), Gaps = 37/291 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T ++ ++ G + + + G+ +
Sbjct: 31 LVTHGHADHARG-----GHGHVWATRETLAIMGLRYGTA--SGTAVDYGEDVRLGGVTIR 83
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS I+ + G+ V+ TGD++ + + + P + + T+ P++
Sbjct: 84 YVPAGHVLGSAQIILD-HAGERVVVTGDYKRRPDPTCLP-FEPVPCDIFVTEATFGLPVF 141
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P + + ++ A+ A NP L+G+Y +GK +R+ E+ R IY++ A
Sbjct: 142 RHPDTGSEMDRLLAALHA---NPDRCVLVGAYALGKAQRVIAELRGRGHHDAIYIHGALE 198
Query: 597 RVLKCL-DFSKE-----DIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
R+ DF E E HI + P L +++++ R +
Sbjct: 199 RMCALYQDFGVELGALRPATGVPAKEMRGHIILSPPSAL---------NDRWSRRLPDPI 249
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
+GW + + + + + S+H + EL + ++ V+P
Sbjct: 250 TAMASGWMRVRQRARQKN--------VELPLVISDHADWDELTDTIREVAP 292
>gi|440798160|gb|ELR19228.1| DNA repair metallobeta-lactamase protein [Acanthamoeba castellanii
str. Neff]
Length = 572
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 638 MSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVK 697
+ ++ R+S I+A PTGW G K +R + YEVPYSEH ++ EL+EFV+
Sbjct: 4 LMSKMKARYSRIIAIRPTGWA---GDVKHTTKR----NLELYEVPYSEHSNYYELREFVE 56
Query: 698 FVSPEHIIPSVN 709
F+ P I+P+VN
Sbjct: 57 FLRPSCIVPTVN 68
>gi|410337685|gb|JAA37789.1| DNA cross-link repair 1C [Pan troglodytes]
gi|410337687|gb|JAA37790.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG +L+TGDFR + E A M +L + I ++ LDT C+P Y P +E
Sbjct: 7 FLFQGNNG-TILYTGDFRLVQGEAARMELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAESFNPKTLF----LIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVL 599
+ V+E +Q S+ ++L+ L G E LF ++ L +++VN FR +
Sbjct: 66 ECLSGVLELVQ--SWITRSLYRVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNM 123
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTG 656
+I T + + IH + + + R + I++ P+
Sbjct: 124 P-------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPST 176
Query: 657 WTFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 177 MWFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|410290016|gb|JAA23608.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 36/237 (15%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVL----QTCPIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG +L+TGDFR + E A M +L + I ++ LDT C+P Y P +E
Sbjct: 7 FLFQGNNG-TILYTGDFRLVQGEAARMELLYSRGRVKDIQSVYLDTMLCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAESFNPKTLF----LIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVL 599
+ V+E +Q S+ ++L+ L G E LF ++ L +++VN FR +
Sbjct: 66 ECLSGVLELVQ--SWITRSLYRVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNM 123
Query: 600 KCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTG 656
+I T + + IH + + + R + I++ P+
Sbjct: 124 P-------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPST 176
Query: 657 WTFSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 177 MWFGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|385773885|ref|YP_005646452.1| exonuclease, beta-lactamase fold, RNA processing [Sulfolobus
islandicus HVE10/4]
gi|323478000|gb|ADX83238.1| exonuclease, beta-lactamase fold, RNA processing [Sulfolobus
islandicus HVE10/4]
Length = 321
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 130/321 (40%), Gaps = 31/321 (9%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH-GKIYCSLITAR 448
K +P + G F +D Y R +THFH DH GL +S I + IT
Sbjct: 6 KILPNGAILIGEKFTIDG-HYER---PFRVVTHFHADHIMGLEKSISICDSIIATPITLD 61
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
++N+ IP + L + K T + +++H GS +L +NG + +TGDF+
Sbjct: 62 ILNLDYAIPPRKAFGLNYDIKMTFDDETIVLKKSDHVIGSAQVLITLKNGLEIGYTGDFK 121
Query: 509 FSEEMASMSVLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
++ T +H LI++ TY P + P ++ V + ++ N
Sbjct: 122 NPDK-------GTPILHPDILIIEATYGKPDFRRPFKDDVESLFADYVRDALMNSPV--R 172
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK--CLDFSKEDIQWFTTNEHESHIHVM 624
I Y + + L + ++ ++ K + + + Q F ++ E+ +
Sbjct: 173 IYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMTNIAIKYGYNISQVFDESQSEAREIMR 232
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
W + SF N++ R F +GW F KK + Y V +S
Sbjct: 233 DDWYI-SFSHY----NEFKRRNGKYFNFLLSGWEFKDVVKKIDEK--------SYAVSFS 279
Query: 685 EHCSFTELKEFVKFVSPEHII 705
+H F +L +V+ S ++II
Sbjct: 280 DHADFDDLIYYVERTSAKYII 300
>gi|350409885|ref|XP_003488876.1| PREDICTED: protein artemis-like [Bombus impatiens]
Length = 159
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 61/126 (48%), Gaps = 18/126 (14%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF------HHGKIYCSLITARLVN 451
+PG VD F S +FL+H H DH GL+ +F + YCS I+ L+
Sbjct: 11 IPGI--SVDRFDGENLTSSIFFLSHCHSDHMHGLSDTFFEYIDEYKKCFYCSPISKALLE 68
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGID---------VTCLEANHCPGSIIILFEPQNGKAVL 502
+ ++ + +N + I I VT + A HCPGS++ LFE N +VL
Sbjct: 69 SRFKFKSSCVKEIGINIPSVIEYITENEEKILICVTSIPAGHCPGSVMFLFEKDN-ISVL 127
Query: 503 HTGDFR 508
+TGDFR
Sbjct: 128 YTGDFR 133
>gi|126459656|ref|YP_001055934.1| mRNA 3-end processing factor [Pyrobaculum calidifontis JCM 11548]
gi|126249377|gb|ABO08468.1| putative mRNA 3-end processing factor [Pyrobaculum calidifontis JCM
11548]
Length = 319
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 124/306 (40%), Gaps = 47/306 (15%)
Query: 403 FRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG-IPWDRL 461
F VD + G +TH H DH ++R + + T + + +K G +P RL
Sbjct: 22 FVVDPVGPVEGPVDFVLVTHGHSDH---VSRYMFKHLVVATAETFKAIEVKFGGVPPRRL 78
Query: 462 QVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT 521
P + + G++V +A H GS++ L E +G +L TGD+ + +
Sbjct: 79 VTAP-GRVFEVGGVEVAVFDAGHIVGSVMYLVE-LDGVQILITGDYSVYGSILTDGAEPV 136
Query: 522 CPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEV 581
LI + TY +P Y FP + V +++ ++ + I +Y +GK + EV
Sbjct: 137 EKPDILITEATYGDPAYVFPNKADVYNELLDLVERHAGERGV--AIAAYPLGKAQ---EV 191
Query: 582 ARVL--RKKIYVNAAKF-RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHM 638
+ +L R K + A++ R L + D+ V+P A +K
Sbjct: 192 SALLGSRAKAHPLVARYNRALGIRSGTDGDVV------------VVPSLKAAPPGFVK-- 237
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
TGW + ++ R ++G Y VP S+H + L EFV
Sbjct: 238 -------------VEATGWYSDEEYRR---RSAERGI---YGVPLSDHSDYVGLIEFVNA 278
Query: 699 VSPEHI 704
+P+ +
Sbjct: 279 SAPKLV 284
>gi|448411174|ref|ZP_21575716.1| mRNA 3'-end processing factor [Halosimplex carlsbadense 2-9-1]
gi|445671063|gb|ELZ23659.1| mRNA 3'-end processing factor [Halosimplex carlsbadense 2-9-1]
Length = 325
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 117/299 (39%), Gaps = 42/299 (14%)
Query: 413 GDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTI 472
GD ++H H DHY + S +TA L++ + R P
Sbjct: 27 GDADATLVSHAHGDHYA------SDSAVVASELTAALLDAR------RDGAAP------- 67
Query: 473 AGID---VTCLEANHCPGSIII-LFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLI 528
A +D V A H GS + L +P G+ L+TGD + + + LI
Sbjct: 68 AAVDHPAVELFPAGHVAGSRAMRLTDPDTGRQYLYTGDCS-TRDRFHLDGFDPVDADVLI 126
Query: 529 LDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRK 587
L+TTY P Y FP EA + V + A + P LF Y +G+ ++L +A R
Sbjct: 127 LETTYGKPEYRFPSTEATVGRVQSWLAATTDRPVLLF---GYALGRAQKLQRILAESPRD 183
Query: 588 KIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL--ASFKRLKHMSNQYAGR 645
+++V A V ++ ++ F + + + P L + R + +
Sbjct: 184 RVFVTDAVADVSDVIERHRD--VTFPGERYGDDVDLGPGDALVCSGSPRSPWVESLVEST 241
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
++ FS GW R + +G ++ ++HC + EL V V PE +
Sbjct: 242 GAVTAGFS--GWAVDDSFVYR--RGFDEGFVL------TDHCDYDELLALVAAVDPEQV 290
>gi|190345415|gb|EDK37296.2| hypothetical protein PGUG_01394 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDRLQV 463
+ S + L+H H DH GL + ++YCS T +L+ ++ + ++R
Sbjct: 27 NASIFLLSHHHADHTIGLRNRTFNRRVYCSKGTKKLLESNESYNHIQHLIRALDYNRQYT 86
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
L + Q I + VT + + HCPGS + L E Q+ KAV++TGD R
Sbjct: 87 LNVEQDKEITSVVVTLIPSYHCPGSCMFLIE-QDEKAVIYTGDIR 130
>gi|395330876|gb|EJF63258.1| hypothetical protein DICSQDRAFT_160484 [Dichomitus squalens
LYAD-421 SS1]
Length = 1105
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 108/265 (40%), Gaps = 45/265 (16%)
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQ--------TC 522
+ +T L+ANHCPG+++ L E G VLHTGD R F E + +Q +
Sbjct: 140 VTITLLDANHCPGAVMFLVEGAKG-TVLHTGDLRAEPLFLENLKRNPYIQRYVHNPRSSS 198
Query: 523 PIHTL-ILDTTYCNP---LYDF---PKQEAVIQFV-IEAIQAESFNPKTLFLIGSYTIGK 574
H L LD Y + L D+ PK EA + A+ + T F + +T G
Sbjct: 199 SAHVLSTLDAIYLDTACLLNDYEVPPKVEAAAGLTGLMAL----YPSTTRFFLNLWTWGY 254
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
E ++ VA+ I+V+ K V + T +E + H F+R
Sbjct: 255 EDIYKAVAQRFDTTIHVDRYKHSVYAHISGDPFLQMIVTRDESSTRFHA-----CERFER 309
Query: 635 LKHMSNQYAGRFS------LIVAFSPT-----GWTFSKGKKKSPGRRWQQGTIIRYEVPY 683
+H+ + GR S +V +P W + + +R +Q ++ VP
Sbjct: 310 CEHV--RVVGRESHTPSGHHVVYVNPVNMDVNSWQRYLQETREQLQRGKQVNVLL--VPL 365
Query: 684 SEHCSFTELKEFVKFVSPEHIIPSV 708
+ H + EL+ V P ++P+
Sbjct: 366 ARHSTLPELRNLVSLFKPRRVVPNT 390
>gi|353238213|emb|CCA70166.1| hypothetical protein PIIN_04105 [Piriformospora indica DSM 11827]
Length = 741
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 47/280 (16%)
Query: 459 DRLQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----F 509
D L+ +PL Q T + + +T ++ANHCPG+++ L E G AVLHTGD R F
Sbjct: 112 DLLKPIPLQQPTAVELSHSMKVRITAIDANHCPGAVMFLVEGPAG-AVLHTGDVRAERVF 170
Query: 510 SEEMASMSVLQ-----------------TCPIHTLILDTTYCNPLYDFPKQEAVIQFVIE 552
E + LQ + + +DT + + +E ++ ++
Sbjct: 171 LESLKGNPALQRYIPHPAAPWPAPPTAPVQTLEAIHIDTAHLFITSNLLSKEDAVEGLLT 230
Query: 553 AIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKED--IQ 610
+ F+P+T FL+ ++ G E + VA+ +++V+ K + + S++ +Q
Sbjct: 231 LMAL--FDPETTFLMNTWCWGYEDIIKGVAKRFGSRVHVDRYKDEIYR---HSRDPTLLQ 285
Query: 611 WFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSP--- 667
T E P + +SN + V S W +
Sbjct: 286 SITRAEETRFHACEPTNRCGTI-----VSNAGNVVYVNPVEMSIEHWELYMAETMQSLLN 340
Query: 668 GRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPS 707
G R + VP+S H EL++ V P+ +IP+
Sbjct: 341 GER-----LTNLLVPFSRHSGVQELQDLVALFKPKKVIPN 375
>gi|381201700|ref|ZP_09908825.1| putative exonuclease [Sphingobium yanoikuyae XLDN2-5]
Length = 344
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 14/182 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T ++ ++ G + ++ + G+ +
Sbjct: 44 LVTHGHADHARG-----GHGHVWATRETLAIMALRYGTA--SGTAVGYGEEIRLGGVTIR 96
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS I+ + G+ V+ TGD++ + + + P + + T+ P++
Sbjct: 97 YVPAGHVLGSAQIILD-HAGERVVVTGDYKRRPDPTCLP-FEPVPCDIFVTEATFGLPVF 154
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P + + ++ A+ A NP L+G+Y +GK +R+ E+ AR IY++ A
Sbjct: 155 RHPDTGSEMDRLLHALHA---NPDRCVLVGAYALGKAQRVICELRARGYHDPIYIHGALE 211
Query: 597 RV 598
R+
Sbjct: 212 RM 213
>gi|150865646|ref|XP_001384956.2| hypothetical protein PICST_17702 [Scheffersomyces stipitis CBS
6054]
gi|149386902|gb|ABN66927.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 411
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 22/200 (11%)
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVL-------PL 466
+C + LTH H DH GL ++YCS +T L++ D L+ L P
Sbjct: 25 ECQIYLLTHHHADHTVGLANKSFCRRVYCSQMTKDLISQSQQFE-DSLRYLVPKQYNEPF 83
Query: 467 NQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEEMASMSVLQTC 522
+ + +T + + HCPGS + L E + +VL TGD R + +A L
Sbjct: 84 VLTVSDEEVTITLIPSYHCPGSTMFLIENRRA-SVLFTGDIRAETWWVNSLAKSPFLFPY 142
Query: 523 PIHTLILDTTYCN--------PLYDFPKQEAVIQFVIEAIQAESFN-PKTLFLIGSYTIG 573
I +LD Y + P + P+ I+ +IE ++ N P+ F T G
Sbjct: 143 TIGAKVLDQLYIDTTFSYRGEPYVEIPENNEGIKVIIEMLKNFPINDPEIQFCFMDSTSG 202
Query: 574 KERLFLEVARVLRKKIYVNA 593
E ++++ + + ++A
Sbjct: 203 FEEAWVQIISSIEGSLSLSA 222
>gi|10432603|dbj|BAB13820.1| unnamed protein product [Homo sapiens]
Length = 577
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 32/235 (13%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+ Y P +E
Sbjct: 7 FLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDRRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKC 601
+ V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 66 ECLSGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP- 124
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+I T + + IH + + + R + I++ P+
Sbjct: 125 ------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 178
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 179 FGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|68477703|ref|XP_717164.1| hypothetical protein CaO19.5362 [Candida albicans SC5314]
gi|68477866|ref|XP_717085.1| hypothetical protein CaO19.12822 [Candida albicans SC5314]
gi|46438783|gb|EAK98109.1| hypothetical protein CaO19.12822 [Candida albicans SC5314]
gi|46438865|gb|EAK98190.1| hypothetical protein CaO19.5362 [Candida albicans SC5314]
Length = 537
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL--- 461
VD F G + LTH H DH QGL S G++YCS +T +++ + R+
Sbjct: 19 VDKFS---GTAEVYLLTHCHQDHLQGLLNSSFCGRVYCSALTKS--TLELDTRYTRVSRF 73
Query: 462 -QVLPLNQKTTI----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
+ N+ T+ + +T + + HCPGS + L E K VL TGD R +E ++
Sbjct: 74 FKAKEYNETFTVDILLGKVSITMIPSYHCPGSAMFLLE-SFCKNVLITGDVR-AESWWTL 131
Query: 517 SVLQTCPIHTLI----------LDTTYCNP----LYDFPKQEAVIQFVIEAIQAESFNPK 562
S+++ + I LDTT+ +Y P E + IE ++ F+
Sbjct: 132 SLIKNPHLFPYITGLKTLDQIYLDTTFSYRGEPYIYIMPNSEGIFA-AIELLKLYPFDSD 190
Query: 563 TLFLIGSYTIGKERLFLEVAR 583
F G E + ++ R
Sbjct: 191 LSFSFVDTVSGSEEAWFQIVR 211
>gi|73537730|ref|YP_298097.1| hypothetical protein Reut_B3896 [Ralstonia eutropha JMP134]
gi|72121067|gb|AAZ63253.1| conserved hypothetical protein [Ralstonia eutropha JMP134]
Length = 368
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 25/188 (13%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS-----LITARLVN 451
C PG F +D ++ +TH H DH + F H C+ ++ ARL
Sbjct: 27 CPPGD-FYIDPWR----PVDRAVITHAHSDHAR-----FGHAHYLCAEPGRGVLLARLPG 76
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
++ L LP Q+ T G+ ++ A H GS + E G+ + +GD++ E
Sbjct: 77 IQ-------LDTLPYGQRITHHGVTLSLHPAGHVLGSAQVRLE-FGGQVWVASGDYKL-E 127
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ + P T I ++T+ P+Y +P Q A++ V QA + + ++ +YT
Sbjct: 128 SDGTCDPFEPVPCDTFITESTFGLPIYRWPPQAALMAEVFHWWQANAQAGRA-SIVYAYT 186
Query: 572 IGKERLFL 579
GK + L
Sbjct: 187 FGKAQRIL 194
>gi|448377620|ref|ZP_21560316.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halovivax asiaticus JCM 14624]
gi|445655564|gb|ELZ08409.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Halovivax asiaticus JCM 14624]
Length = 335
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 46/297 (15%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
++H H DH T S G + CS TA + + G+ +D + P V
Sbjct: 33 VSHAHADH----TFSSSPGTVVCSAETAAIATARTGVEFDSVSAAP----------GVEL 78
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQ--TCPIHTLILDTTYCNPL 537
+ A H GS + E +G +TGDF + + A + + L+++TTY +P
Sbjct: 79 VPAGHVVGSRAAVIEAADGTRYCYTGDFS-TRDRAYLEGFDPAALDVDVLVMETTYGHPR 137
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAAKF 596
Y P Q + + I+ P LFL G Y++G+ ++L A ++I V+
Sbjct: 138 YRLPDQADLEASIHHWIRDHPDRP--LFLFG-YSLGRAQKLQWLAAEATERRILVSRTID 194
Query: 597 RVLKCLD------FSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRF-SLI 649
V + ++ F+ E + + +E + + + S + + + A +L
Sbjct: 195 EVNRAIESSTDIAFAGEPVDGGSISELQPEALTDEIVVVPSNQSRRDWIDAIADETGALK 254
Query: 650 VAFSPTGWTFSKGKKKSPGRRWQQGTIIR--YEV--PYSEHCSFTELKEFVKFVSPE 702
FS GW + + R Y+V P ++HC F EL E V+ PE
Sbjct: 255 AGFS--GWAV------------EDSFLYRGDYDVTFPLTDHCDFDELIETVRSTDPE 297
>gi|85375461|ref|YP_459523.1| hypothetical protein ELI_13170 [Erythrobacter litoralis HTCC2594]
gi|84788544|gb|ABC64726.1| hypothetical protein ELI_13170 [Erythrobacter litoralis HTCC2594]
Length = 343
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 128/303 (42%), Gaps = 50/303 (16%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG---------IPWDRLQVLPLNQK 469
+TH H DH +G HG+ + T ++ ++ IP + +P+
Sbjct: 34 LVTHGHADHARG-----GHGETVATPETLAIMKLRYRTGAEDENGEIP---TKAVPVEYG 85
Query: 470 TTI---AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHT 526
TI G+D T + A H GS IL E G+ V+ TGD++ + + Q P
Sbjct: 86 ETIRLKGGVDATYVPAGHVLGSAQILLE-HAGERVVITGDYKRRPD-PTCPPFQVTPCDI 143
Query: 527 LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARV 584
I + T+ P++ P E + ++E + A +P+ L+G+Y +GK +R+ E+ A
Sbjct: 144 FITEATFGLPVFTHPPIEDEMAKLLERLAA---HPERCVLVGAYALGKAQRVIAELRAAG 200
Query: 585 LRKKIYVNAAKFRVLKCLDFSKEDIQWF------TTNEHESHIHVMPMWTLASFKRLKHM 638
+ IY++ A ++ + + D+ +E HI V P L
Sbjct: 201 HHQPIYLHGAMEKMCRLYEEHGVDLGELRLVSDAKKDEMRGHIVVSPPSAL--------- 251
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
+++++ R + +GW + + + R + +I S+H + EL V+
Sbjct: 252 NDRWSRRLPEPITAMASGWMRVRQRARQ--RNVELPLVI------SDHADWGELTRTVEE 303
Query: 699 VSP 701
V P
Sbjct: 304 VDP 306
>gi|328705626|ref|XP_001944274.2| PREDICTED: protein bicaudal C homolog 1-like [Acyrthosiphon pisum]
Length = 712
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 35/54 (64%)
Query: 241 LHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
L LGL +Y F EIDW T + LTE DL IGVTALG R+KIL ++ E+ K
Sbjct: 628 LAILGLDKYINLFKSHEIDWTTFKTLTESDLREIGVTALGARRKILLSIAELNK 681
>gi|338721599|ref|XP_003364407.1| PREDICTED: protein artemis isoform 2 [Equus caballus]
Length = 578
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 108/234 (46%), Gaps = 30/234 (12%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +E
Sbjct: 7 FLFQGNNG-TVLYTGDFRLAKGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ ++E +++ + +P ++L G E LF ++ +++V+ K + + +
Sbjct: 66 ECLSGIVELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEEFGVQVHVD--KLDMFRNM 123
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTF 659
DI T + S IH + + + + + ++ P+ F
Sbjct: 124 ----PDILHHLTTDRRSQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWF 179
Query: 660 SKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 180 GERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNAYPNV 226
>gi|357386163|ref|YP_004900887.1| mRNA 3-end processing factor [Pelagibacterium halotolerans B2]
gi|351594800|gb|AEQ53137.1| mRNA 3-end processing factor [Pelagibacterium halotolerans B2]
Length = 331
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 86/184 (46%), Gaps = 15/184 (8%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP-WDRLQVLPLNQKTTIAGIDV 477
+TH H DH RS HGK+ + T ++ + G Q +K I + +
Sbjct: 28 IITHGHADH----ARS-GHGKVLATPDTIAIMKTRYGADCAGSFQAASFGEKVRIDDVTI 82
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDF-RFSEEMASMSVLQTCPIHTLILDTTYCNP 536
T A H GS +L E Q+G+ V+ TGD+ R E+ A L C + L+ + T+ P
Sbjct: 83 TLYPAGHILGSAQVLIE-QDGQRVVVTGDYKRLPEKTAQPFELVACDL--LVTEATFGLP 139
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR--VLRKKIYVNAA 594
++ P I + +++ A +P+ +IG+Y +GK + + + R IY++ A
Sbjct: 140 VFQHPHPTEEIARLFKSLAA---HPERAHVIGAYALGKAQRVIALLRDGGYDAPIYLHGA 196
Query: 595 KFRV 598
R+
Sbjct: 197 MQRL 200
>gi|189197579|ref|XP_001935127.1| hypothetical protein PTRG_04794 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981075|gb|EDU47701.1| hypothetical protein PTRG_04794 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 609
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 20/158 (12%)
Query: 462 QVLPLNQKTTIA-----GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR----FSEE 512
+ LPL+ T I I VT ++ANHC G+++ L E + G+ VL+TGD R +
Sbjct: 24 KALPLDTPTEIELAPGNTIRVTLIDANHCVGAVMFLIEGK-GEIVLYTGDIRAETWWVNS 82
Query: 513 MASMSVLQTCPIHTLILDTTYCN--------PLYDFPKQEAVIQFVIEAIQAESFNPKTL 564
+ VL + L LD Y + P +FP + I+ ++ + + + T+
Sbjct: 83 LVQNPVLLPYTLGNLRLDCVYLDTTFATKKMPYREFPSKAEGIRELLSKV--DEYPDDTI 140
Query: 565 FLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
F S+T G E +++ ++ L +I+++ + R+ L
Sbjct: 141 FYFHSWTFGYENIWVALSTYLGSRIHLDDYRARIYGSL 178
>gi|373459939|ref|ZP_09551706.1| DNA ligase I, ATP-dependent Dnl1 [Caldithrix abyssi DSM 13497]
gi|371721603|gb|EHO43374.1| DNA ligase I, ATP-dependent Dnl1 [Caldithrix abyssi DSM 13497]
Length = 326
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 31/289 (10%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
F++H H DH L R H KI C+ TA V +I Q + Q+ ++ ++
Sbjct: 33 FVSHAHTDH---LAR---HKKILCTPPTAEFVQQRIKP--THYQPVEFGQELSVGDYKIS 84
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H GS I + +NG ++L+TGDFR ++ + LI++TT+ Y
Sbjct: 85 LHPAGHILGSAQIKIQ-KNGISLLYTGDFRLHPS-RTVEPFEYVQADVLIMETTFGQARY 142
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
P +E V +I+ + KT +I +Y++GK + L++ + + V R
Sbjct: 143 RMPSREEVEDRLIDRCKTLLAKNKTP-IIFAYSLGKGQEALKILTDAQIPVAVEEQIARY 201
Query: 599 LKCLD---FSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPT 655
+ + + + F N+ ++P+ N RF +++F T
Sbjct: 202 VPTYEKFGVTFGHYELFDRNDLRGKALLLPV-------------NYRFHRFYKMLSFGYT 248
Query: 656 GWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+ G + + RR+ +I P S+H + +L E + P+ I
Sbjct: 249 IYLSGWGMEPNAHRRFGVNEVI----PLSDHADYHQLLELADALKPQEI 293
>gi|379003209|ref|YP_005258881.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Pyrobaculum oguniense TE7]
gi|375158662|gb|AFA38274.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Pyrobaculum oguniense TE7]
Length = 314
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Query: 403 FRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR---LVNMKIGIPWD 459
F VD ++G +TH H DH H Y ++ T + ++ G P
Sbjct: 18 FVVDPAGPIKGPVDFVLITHGHSDHVS------LHAYRYPAVATKETFAAMAVRYGRPHP 71
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
R V+ + + + +A H GS++ L E + G VL TGDF S + +
Sbjct: 72 RRIVVSPGDVLELNEVQIAAFDAGHILGSVMYLVEVE-GLQVLFTGDFNTSGSILTDGAE 130
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
L+++ TY +P Y FP + + +IEA+ E + I +Y +GK +
Sbjct: 131 PVERPDVLVMEATYGDPAYVFPNRAEIYDRLIEAV--EKYASDGGVAISAYPLGKAQ--- 185
Query: 580 EVARVLRKKI 589
EVA++ +++
Sbjct: 186 EVAKLFGRRV 195
>gi|418054241|ref|ZP_12692297.1| beta-lactamase domain protein [Hyphomicrobium denitrificans 1NES1]
gi|353211866|gb|EHB77266.1| beta-lactamase domain protein [Hyphomicrobium denitrificans 1NES1]
Length = 339
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 133/314 (42%), Gaps = 35/314 (11%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG- 455
C PG F +D + +TH H DH RS HG + + T ++ ++ G
Sbjct: 21 CEPGG-FYIDPHR----SVDRALITHGHSDH----ARS-GHGAVLATRETIDIMKVRYGE 70
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ L +I G+ V + A H GS ++ E +AV+ +GD++ + + +
Sbjct: 71 HSAGAFEAQALGVPISINGVGVRLVPAGHILGSAQVVIEWAGKRAVI-SGDYKRAAD-PT 128
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + P + + T+ P++ K E ++ ++ ++ AE P LIG+Y +GK
Sbjct: 129 CAPFELVPCDVFVTEATFALPVFRHEKAEHEVEKLLGSMAAE---PDRTHLIGAYNLGKC 185
Query: 576 RLFLEVAR--VLRKKIYVNAAKFRVLKC---LDFSKEDIQWFTTNEHESHIHVMPMWTLA 630
+ + V R IY++ A + + L D++ TT + +S + M +
Sbjct: 186 QRMIRVIRDAGYTDPIYLHGAVIALTELYQRLGVDLGDVRPATTEDAKSLRGGIVMCPPS 245
Query: 631 SFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFT 690
+ + +++A RF V +GW +G+ + G + + S+H +
Sbjct: 246 A------LGDRWARRFGDPVNAFASGWMRVRGRARQHG--------VELPLIVSDHVDWP 291
Query: 691 ELKEFVKFVSPEHI 704
EL V V E I
Sbjct: 292 ELIATVTEVGAEEI 305
>gi|296284802|ref|ZP_06862800.1| hypothetical protein CbatJ_14336 [Citromicrobium bathyomarinum
JL354]
Length = 344
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 131/301 (43%), Gaps = 44/301 (14%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK--IGIPWDRLQVL----PLNQKTTI 472
+TH H DH +G HG Y + T ++ ++ G D ++ P+ TI
Sbjct: 35 LVTHGHADHARG-----GHGTTYATPETLAIMELRYRTGAEDDAGEIPHRAEPVRYGETI 89
Query: 473 ---AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLIL 529
G+DVT + A H GS IL E G+ ++ TGD++ + + + P I
Sbjct: 90 RLKGGVDVTYIPAGHVLGSAQILLE-HAGERIVVTGDYKRRPD-PTCPPFEVTPCDIFIT 147
Query: 530 DTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRK 587
+ T+ P++ P + + + + A +P + L+G+Y +GK +R+ E+ A
Sbjct: 148 EATFGLPVFTHPPIAGEMAKLTDRLAA---HPDSCVLMGAYALGKAQRVIAELRAAGHAD 204
Query: 588 KIYVNAAKFRVLKCLDFSKEDI-QWFTTNEHE-----SHIHVMPMWTLASFKRLKHMSNQ 641
IY++ A R+ + + D+ + ++H+ HI V P L +++
Sbjct: 205 PIYLHGAMERMCRLYEEHGVDLGELRLVSDHDKDAMRGHIVVCPPGAL---------NDR 255
Query: 642 YAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
++ R + +GW + + + R + II S+H + EL + ++ V P
Sbjct: 256 WSRRLPDPITAMASGWMRVRQRARQ--RNVELPLII------SDHADWGELTDTIREVDP 307
Query: 702 E 702
+
Sbjct: 308 Q 308
>gi|424909726|ref|ZP_18333103.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392845757|gb|EJA98279.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 338
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 132/301 (43%), Gaps = 46/301 (15%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T ++ ++ G + Q + ++ + G+ V
Sbjct: 35 LITHGHSDHARA-----GHGAVLATRQTLDIMRIRYGEDFCGSEQAVAFGERVEVNGVTV 89
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E NG ++ +GD++ + + + +T P I + T+ P+
Sbjct: 90 GFHPAGHVLGSAQISVE-MNGLRIVASGDYKRGID-PTCAPFETVPCDVFITEATFGLPV 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR-----KKIYVN 592
+ P ++ +I+ P+ L+G+Y++GK + V R+LR + IY++
Sbjct: 148 FHHPLPRVETAKLLTSIKQ---FPERTHLVGAYSLGKAQ---RVIRLLRDNGYAEPIYIH 201
Query: 593 AAKFRV--------LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG 644
A R+ + D ++ + + I V P ++F+ ++A
Sbjct: 202 GALARLCDYYVSQGIDLGDLRPATLEKSDPSAFKGAIVVGPP---SAFQ------ERWAR 252
Query: 645 RFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
RF+ ++AF+ +GW + + K G + + S+HC + EL E +K + P+
Sbjct: 253 RFNEPLIAFA-SGWMMVRQRAKQGG--------VELPLVISDHCDWPELLETIKEIFPQA 303
Query: 704 I 704
+
Sbjct: 304 V 304
>gi|170289661|ref|YP_001736477.1| RNA processing exonuclease [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170173741|gb|ACB06794.1| Predicted exonuclease of the beta-lactamase fold involved in RNA
processing [Candidatus Korarchaeum cryptofilum OPF8]
Length = 424
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 88/219 (40%), Gaps = 49/219 (22%)
Query: 399 PGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK-----------------IY 441
P P VDA LTH H+DH L R HG +Y
Sbjct: 48 PPIPEEVDAV----------LLTHAHLDHSGALPRLVSHGMEVPIYALDITKYYTELLLY 97
Query: 442 CSLITARLVNMKIGI-------PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFE 494
S+ A+L +G + + + N + ++VT ++A H PGS +
Sbjct: 98 DSIKVAKLKGHNLGYGARDVNKTLENFRTIDFNIPFKVGDLEVTAIDAGHIPGSAMFHIS 157
Query: 495 PQNGKAVLHTGDFRFSEE--MASMSVLQTCPIHTLILDTTYC---NPLYDFPKQEAVIQF 549
+G ++L+TGDF E M + + LI +TTY +P D KQE +++
Sbjct: 158 -YDGTSLLYTGDFNTVESRLMPPARIEDVPKVDILITETTYAKKEHPPRD--KQEILLKE 214
Query: 550 VIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK 588
+ E+ N +I + IG+ LEVA LR +
Sbjct: 215 TV----METLNSGGTAIIAGFAIGR---LLEVAMALRAR 246
>gi|182414962|ref|YP_001820028.1| ATP-dependent DNA ligase I [Opitutus terrae PB90-1]
gi|224487907|sp|B1ZZL9.1|DNLI_OPITP RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|177842176|gb|ACB76428.1| DNA ligase I, ATP-dependent Dnl1 [Opitutus terrae PB90-1]
Length = 1017
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 118/296 (39%), Gaps = 40/296 (13%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQ-VLPLNQKTTI-AGID 476
F++H H DH + H +I CS TA L+ ++ R++ VLP Q + A
Sbjct: 30 FVSHAHSDH------TATHDEILCSAGTAALMRARLDA--KRIEHVLPFGQTEQLTADCG 81
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP 536
VT A H GS L E ++L+TGDF+ S T +I++TT+ P
Sbjct: 82 VTLHPAGHIFGSAQCLLEHGEHGSLLYTGDFKLRRGR-SAEPCATPHAELVIMETTFGRP 140
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
Y FP V+ I E+ + ++ Y++GK + L + + ++
Sbjct: 141 HYVFPPTAQVLN-DIATFCHETIADDGVPVLFGYSLGKSQELLCSLEESQLPVMLHPQTH 199
Query: 597 ---RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFS 653
RV + + + F H+ + P + R + G + ++
Sbjct: 200 KLTRVYEQFGIAFPPYREFDLATVRGHVVICPPQS-----RESAFVRRIPGHRTAMI--- 251
Query: 654 PTGWTFSKGKKKSPGRRWQQGTIIRYE----VPYSEHCSFTELKEFVKFVSPEHII 705
TGW G I RY+ P S+H + +L FV+ V+P+ ++
Sbjct: 252 -TGWAMDP------------GAIYRYQCDAAFPLSDHADYQDLLRFVEAVNPQRVL 294
>gi|146419523|ref|XP_001485723.1| hypothetical protein PGUG_01394 [Meyerozyma guilliermondii ATCC
6260]
Length = 651
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 414 DCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV----------NMKIGIPWDRLQV 463
+ S + L+H H DH GL + ++YCS T +L+ ++ + ++R
Sbjct: 27 NASIFLLSHHHADHTIGLRNRTFNRRVYCSKGTKKLLESNESYNHIQHLIRALDYNRQYT 86
Query: 464 LPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
L + Q I + VT + + HCPGS + L E Q+ KAV++TGD R
Sbjct: 87 LNVEQDKEITLVVVTLIPSYHCPGSCMFLIE-QDEKAVIYTGDIR 130
>gi|392585184|gb|EIW74524.1| hypothetical protein CONPUDRAFT_169911 [Coniophora puteana
RWD-64-598 SS2]
Length = 1574
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 106/289 (36%), Gaps = 88/289 (30%)
Query: 419 FLTHFHMDHYQGLTR-SFHHGKIYCSLITARL---------------------------- 449
L+H H DH GL+ SF H K+ CS+ T +
Sbjct: 37 LLSHAHADHLVGLSAPSFAH-KVICSVDTKAILLRYETYGTRSLYDEGTTAQRSRTFKHL 95
Query: 450 -VNMKIGI--------PWDRLQVLPLNQKTTI-AG----IDVTCLEANHCPGSIIILFEP 495
V ++ + D L LPLN TT AG + +T L+ANHCPG+++ L +
Sbjct: 96 RVPPRVALDGTTDYSHARDLLHALPLNTPTTFEAGGGEEVQITLLDANHCPGAVMFLIDG 155
Query: 496 QNGKAVLHTGDFR----FSEEMASMSVLQ--------------TC--------------- 522
G AVLHT D R F + +LQ C
Sbjct: 156 PRG-AVLHTSDLRAEPWFVNSLTRNPMLQPFIADAPGPDVQIGACRARKEALAERAGTSA 214
Query: 523 --------PIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
+ + LDT P +E + ++ I F +T F I S+T+G
Sbjct: 215 SEALGIRRTLSAIHLDTACVFSDIVVPTKERAVADLVSLITL--FPAETHFFINSWTLGY 272
Query: 575 ERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHV 623
E + ++R R +I+V+ K+ + L + T +E + H
Sbjct: 273 EDILKGISRAFRCQIHVDRYKYELYAHLSADPFLARILTRDEKSTCFHA 321
>gi|283779817|ref|YP_003370572.1| hypothetical protein Psta_2038 [Pirellula staleyi DSM 6068]
gi|283438270|gb|ADB16712.1| conserved hypothetical protein [Pirellula staleyi DSM 6068]
Length = 318
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 120/293 (40%), Gaps = 40/293 (13%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL-QVLPLNQKTTIAGIDV 477
F++H H DH H + +TA L + G D+L + LP Q +
Sbjct: 27 FISHAHSDHMAA------HELAIGTPLTAALYRRRYG---DKLVRELPFEQPWQWDEFSL 77
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP-IHTLILDTTYCNP 536
+ A H GS + L + +++L+TGDFR E M + + CP L+++ T+ P
Sbjct: 78 STHPAGHIAGSAM-LHVAASDQSLLYTGDFRLRESMTAET--PRCPHADILVMECTFGQP 134
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRK-----KIYV 591
Y FP +E + +I+ I +++ + + +I +Y GK + EV +L K++
Sbjct: 135 HYKFPPRELASEQLID-IVSQTLRRQEVPVIHAYVTGKAQ---EVTAILAHAGLPVKVHP 190
Query: 592 NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA 651
A+ + K T+ E +++ P + + L ++ +
Sbjct: 191 LVAEVNAITAAHGIKIGNYGVATSLTEGFVYIAPPRSQKAMPLLGPVAKR---------T 241
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+ TGW W+ Y V S+H + EL E V V+P +
Sbjct: 242 IAVTGWAIDP--------TWRTRQRYDYAVVLSDHADYDELLECVDRVAPRQV 286
>gi|198422766|ref|XP_002127182.1| PREDICTED: similar to LOC495436 protein [Ciona intestinalis]
Length = 1353
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
+ L L L +Y E F ++E+D T LTE DL +G+T GP+KKIL + E+KK
Sbjct: 1219 DLLSHLNLEKYSEVFTKQEVDLQTFLTLTESDLTELGITIFGPKKKILMAIEELKK 1274
>gi|410963230|ref|XP_003988168.1| PREDICTED: protein artemis isoform 2 [Felis catus]
gi|410963232|ref|XP_003988169.1| PREDICTED: protein artemis isoform 3 [Felis catus]
gi|410963234|ref|XP_003988170.1| PREDICTED: protein artemis isoform 4 [Felis catus]
Length = 575
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P +E
Sbjct: 7 FLFQGNNG-TVLYTGDFRLAQGEAARMELLHSGGRVKDIQSVYLDTTFCDPKFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCL 602
+ ++E +++ + +P ++L G E LF ++ +++V+ K + + +
Sbjct: 66 ECLSGILELVRSWITRSPYHVVWLNCKAAYGYEYLFTHLSEEFGIQVHVD--KLDMFRNM 123
Query: 603 DFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTF 659
DI T + + IH + + + ++ ++ P+ F
Sbjct: 124 ----PDILHHLTTDRNTQIHACRHPKAEEYFHWNKLPCGNISKNTIPLHTISIKPSTMWF 179
Query: 660 SKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ +K+ I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 180 GERTRKT-------NVIVRTGESSYRACFSFHSSYSEVKDFLSYICPVNVYPNV 226
>gi|229581495|ref|YP_002839894.1| hypothetical protein YN1551_0850 [Sulfolobus islandicus Y.N.15.51]
gi|228012211|gb|ACP47972.1| conserved hypothetical protein [Sulfolobus islandicus Y.N.15.51]
Length = 328
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 129/321 (40%), Gaps = 31/321 (9%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH-GKIYCSLITAR 448
K +P + G F +D Y R +THFH DH GL +S I + IT
Sbjct: 6 KILPNGAILIGEKFTIDG-HYER---PFRVVTHFHADHIMGLEKSISICDSIIATPITLD 61
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
++ + IP + L + K T + +++H GS +L +NG + +TGDF+
Sbjct: 62 ILKLDYAIPPRKAFGLNYDIKMTFDDETIVLKKSDHVIGSAQVLITLKNGLEIGYTGDFK 121
Query: 509 FSEEMASMSVLQTCPIH--TLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFL 566
++ T +H LI++ TY P + P ++ V + ++ N
Sbjct: 122 NPDK-------GTPILHPDILIIEATYGKPDFRRPFKDDVESLFADYVRDALMNSPV--R 172
Query: 567 IGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK--CLDFSKEDIQWFTTNEHESHIHVM 624
I Y + + L + ++ ++ K + + + Q F ++ E+ +
Sbjct: 173 IYGYHGKLQEIMLSLRKMGIDAPFIVGGKISKMTNIAIKYGYNISQVFDESQSEAREIMR 232
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
W + SF N++ R F +GW F KK + Y V +S
Sbjct: 233 DDWYI-SFSHY----NEFKRRNGKYFNFLLSGWEFKDVVKKIDEK--------SYAVSFS 279
Query: 685 EHCSFTELKEFVKFVSPEHII 705
+H F +L +V+ S ++II
Sbjct: 280 DHADFDDLIYYVERTSAKYII 300
>gi|410248330|gb|JAA12132.1| DNA cross-link repair 1C [Pan troglodytes]
Length = 577
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 32/235 (13%)
Query: 491 ILFEPQNGKAVLHTGDFRFSE-EMASMSVLQTC----PIHTLILDTTYCNP-LYDFPKQE 544
LF+ NG +L+TGDFR + E A M +L + I ++ LDT C+P Y P +E
Sbjct: 7 FLFQGNNG-TILYTGDFRLVQGEAARMELLYSGGRVKDIQSVYLDTMLCDPRFYQIPSRE 65
Query: 545 AVIQFVIEAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKC 601
++ V+E +++ + +P ++L G E LF ++ L +++VN FR +
Sbjct: 66 ECLRGVLELVRSWITRSPYHVVWLNCKAAYGYEYLFTNLSEELGVQVHVNKLDMFRNMP- 124
Query: 602 LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWT 658
+I T + + IH + + + R + I++ P+
Sbjct: 125 ------EILHHLTTDRNTQIHACRHPKAEEYFQWSKLPCGITSRNRIPLHIISIKPSTMW 178
Query: 659 FSKGKKKSPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
F + +K+ I+R Y +S H S++E+K+F+ ++ P + P+V
Sbjct: 179 FGERSRKT-------NVIVRTGESSYRACFSFHSSYSEIKDFLSYLCPVNAYPNV 226
>gi|15897139|ref|NP_341744.1| hypothetical protein SSO0188 [Sulfolobus solfataricus P2]
gi|284174383|ref|ZP_06388352.1| hypothetical protein Ssol98_06962 [Sulfolobus solfataricus 98/2]
gi|384433650|ref|YP_005643008.1| hypothetical protein [Sulfolobus solfataricus 98/2]
gi|13813322|gb|AAK40534.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
gi|261601804|gb|ACX91407.1| conserved hypothetical protein [Sulfolobus solfataricus 98/2]
Length = 328
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 135/337 (40%), Gaps = 46/337 (13%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFH-HGKIYCSLITAR 448
K +P + G F +D + +THFH DH GL +S I + IT
Sbjct: 6 KILPNGAILIGKRFTIDG----HHERPFRVVTHFHADHITGLEKSISISDGIIATPITLD 61
Query: 449 LVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
++++ IP + L + K T ++ +++H GS +L +NG + +TGDF+
Sbjct: 62 ILSLDYAIPPRKAFGLNYDIKMTFEDENIVLKKSDHVIGSAQVLITLENGLEIGYTGDFK 121
Query: 509 FSEEMASMSVLQTCPI---HTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ-AESFNPKTL 564
+ + PI LI++ TY P + P ++ V + ++ A + P +
Sbjct: 122 --------NPGKGTPILHPDILIIEATYGRPDFRRPFKDDVESLFADYVRDALMYGPVRI 173
Query: 565 FLIGSYTIGKERLFLEVARVLRK----KIYVNAAKFRVLK--CLDFSKEDIQWFTTNEHE 618
+ G EV LRK ++ K + + + Q F ++ E
Sbjct: 174 Y-------GYHGKLQEVMISLRKMGVDAPFIVGGKISKMTNIAIKYGYNISQVFDESQSE 226
Query: 619 SHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIR 678
+ + W + SF N++ R F +GW F KK +
Sbjct: 227 AKEIMRDSWYI-SFSHY----NEFKRRNGKYYNFLLSGWEFKNVVKKIDEK--------S 273
Query: 679 YEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDS 715
Y V +S+H F +L +V+ S ++II + GR S
Sbjct: 274 YTVSFSDHADFDDLIYYVERTSAKYII---TDGGRRS 307
>gi|50554327|ref|XP_504572.1| YALI0E29931p [Yarrowia lipolytica]
gi|49650441|emb|CAG80176.1| YALI0E29931p [Yarrowia lipolytica CLIB122]
Length = 839
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 99/249 (39%), Gaps = 47/249 (18%)
Query: 418 WFLTHFHMDHYQGLTRSFHHGKIYCSLITARLV-------------NMKIGIP------- 457
W L+H H DH GL G +YCS +T ++ N IP
Sbjct: 33 WLLSHVHTDHTAGLENV--GGLVYCSKVTKNMLVEKDPRSKRHKAYNDMAAIPNGTLKSK 90
Query: 458 ----WDRLQVLPLNQKTTI----AGIDVTCLEA-NHCPGSIIILFEPQNGKAVLHTGDFR 508
DRL+ L L+ I + VT L+A NHCPG+++ L + GK VL+TGD R
Sbjct: 91 YTPIQDRLRGLDLDTPFEINVGAYTVSVTLLDASNHCPGAVMFLLQ-GKGKCVLYTGDIR 149
Query: 509 F------SEEMASMSVLQTCPIHTL---ILDTTY---CNPLYDFPKQEAVIQFVIEAIQA 556
S E + + C + L LDTT+ P + +++ +
Sbjct: 150 AEKWWLRSLENHPLLLPYICGVKKLDCIYLDTTFGYRGEPYISLVDNNTGLGKLMKQLSR 209
Query: 557 ESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF-RVLKCLDFSKED--IQWFT 613
+ + YT G E ++ +A K+++ + RV K L I++ T
Sbjct: 210 YPLTGSIQYFLPRYTSGFELIWQYLAAAYDWKVHMEEDELQRVSKVLQVEGRSHYIKYLT 269
Query: 614 TNEHESHIH 622
E+ +H
Sbjct: 270 KEAAEATLH 278
>gi|71657612|ref|XP_817319.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882502|gb|EAN95468.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 522
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 44/157 (28%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
VP P +D F + + L+HFH DH +GL+ S+ G I C +T L+ K G+
Sbjct: 3 VPRFPVYIDQFYSEDNPDAVYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYGVC 62
Query: 458 WDRLQV-LPLNQKTTIA----------------------------GIDVTC--------- 479
++ V LPL Q+T G D C
Sbjct: 63 MEKCSVSLPLFQRTPFLRMVTTTSSKVAPDSAEEREFVLDTVKDNGSDENCGSNFGEDGM 122
Query: 480 -----LEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
L A H PGS++ E G VL+TGDF++ E
Sbjct: 123 VMLYLLPAFHIPGSVMFFLETPFGN-VLYTGDFKYDE 158
>gi|294055984|ref|YP_003549642.1| ATP-dependent DNA ligase I [Coraliomargarita akajimensis DSM 45221]
gi|293615317|gb|ADE55472.1| DNA ligase I, ATP-dependent Dnl1 [Coraliomargarita akajimensis DSM
45221]
Length = 323
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 122/289 (42%), Gaps = 32/289 (11%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDVT 478
++H H DH H C+ T L+ ++ G + R LP + + +
Sbjct: 30 ISHAHGDHVA------RHESFLCTPATLDLIRVRHGERFAQRGSALPFGEWRELRTCRMR 83
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H GS ++ E ++L+TGDF+ ++ +A+ ++ Q + L+++TT+ P Y
Sbjct: 84 FWPAGHVLGSAMVEVESDRHGSLLYTGDFKLAQGLAAEAI-QVPEVDVLVMETTFGRPNY 142
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
FP E V ++ Q +S + ++ +Y++GK + L + + + V+ ++
Sbjct: 143 RFPSVETVRADLLCFCQ-QSLGAGMIPVLLAYSLGKAQEVLMLLEGIGVPLMVHRTIEQL 201
Query: 599 LKCLDFSKEDI---QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPT 655
+ F DI + + + +MP L R R +++ +
Sbjct: 202 NQVYRFHGVDIPDTRPLDFLNMQGCVVLMPPSVLKKLPREN-------CRVAMV-----S 249
Query: 656 GWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
GW G S R++ +I P S+H + L E VK V P+ +
Sbjct: 250 GW----GLDDSARYRYKADEVI----PLSDHADYPGLIELVKRVKPQKV 290
>gi|407404517|gb|EKF29935.1| hypothetical protein MOQ_006262 [Trypanosoma cruzi marinkellei]
Length = 526
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 63/157 (40%), Gaps = 44/157 (28%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
VP P +D F + + L+HFH DH +GL+ S+ G I C +T L+ K G+
Sbjct: 3 VPRLPVYIDQFYLDDNPDAVYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYGVC 62
Query: 458 WDRLQV-LPLNQKTTIAGIDVT-------------------------------------- 478
++ V LPL Q+T + + T
Sbjct: 63 MEKCSVSLPLFQRTPLLRMATTTSSKAAPDGVEERDVVLDTVKDNCSDDNRGGNFSEEGM 122
Query: 479 ----CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
L A H PGS++ E G VL+TGDF++ E
Sbjct: 123 VMLYLLPAFHIPGSVMFFLETPCGN-VLYTGDFKYDE 158
>gi|145592084|ref|YP_001154086.1| mRNA 3-end processing factor [Pyrobaculum arsenaticum DSM 13514]
gi|145283852|gb|ABP51434.1| putative mRNA 3-end processing factor [Pyrobaculum arsenaticum DSM
13514]
Length = 327
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 83/190 (43%), Gaps = 15/190 (7%)
Query: 403 FRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITAR---LVNMKIGIPWD 459
F VD ++G +TH H DH H Y ++ T + ++ G P
Sbjct: 31 FVVDPAGPIKGLVDFVLITHGHSDHVS------LHAYRYPAVATKETFAAMAVRYGRPHP 84
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
R V+ + + + +A H GS++ L E + G VL TGDF S + +
Sbjct: 85 RRIVVSPGDVLELNEVQIAAFDAGHILGSVMYLVEVE-GLQVLFTGDFNTSGSILTDGAE 143
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
L+++ TY +P Y FP + + +IEA+ E + I +Y +GK +
Sbjct: 144 PVERPDVLVMEATYGDPAYVFPNRAEIYDRLIEAV--EKYASDGGVAISAYPLGKAQ--- 198
Query: 580 EVARVLRKKI 589
EVA++ +++
Sbjct: 199 EVAKLFGRRV 208
>gi|281211443|gb|EFA85607.1| DNA repair metallo-beta-lactamase domain-containing protein
[Polysphondylium pallidum PN500]
Length = 389
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 643 AGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPE 702
GR++ ++ F PTGW+ + K +RW TI Y V YSEH SF EL + + P
Sbjct: 6 GGRYNRVIGFCPTGWS----QAKKSVKRWATATI--YMVAYSEHSSFNELYQCIDTFRPT 59
Query: 703 HIIPSVNND 711
I+P+V+ D
Sbjct: 60 EIVPTVDCD 68
>gi|385803685|ref|YP_005840085.1| mRNA 3'-end processing factor [Haloquadratum walsbyi C23]
gi|339729177|emb|CCC40409.1| homolog to mRNA 3'-end processing factor [Haloquadratum walsbyi
C23]
Length = 332
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 123/292 (42%), Gaps = 40/292 (13%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
++H H DH G+I S +T L +++ + + P +K T +D+
Sbjct: 39 VSHAHGDHLVDTA-----GEIVASELTVALASVR------QSECKP--EKITHPAVDL-- 83
Query: 480 LEANHCPGS-IIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS ++L +P+ L+TGD R S+ + + LIL+TTY +P Y
Sbjct: 84 IPAGHIAGSRAVLLTDPETDCRYLYTGDCRLSDRL-YLDGFDPVDADVLILETTYGDPKY 142
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAAKFR 597
FP E + E + + LF Y +G+ ++L + + R ++++ A
Sbjct: 143 RFPSPEKTHDRIREWLAQTMDDVVILF---GYALGRAQKLQVLLESTARSRVFITDAIAE 199
Query: 598 VLKCLDFSKE---DIQWFTTNE--HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAF 652
+ ++ E D + +TT+ V+PM T RL + + ++ F
Sbjct: 200 LNAVIESHHEISFDARRYTTDVTLQPGDAVVLPMQT----TRLGWIESLIEATDAMTAGF 255
Query: 653 SPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
S GW G +G ++ S+HC + EL E V V PE +
Sbjct: 256 S--GWAIDDSFIYQRG--VDKGFVL------SDHCDYDELIELVTTVDPERV 297
>gi|241747538|ref|XP_002414332.1| DNA cross-link repair protein pso2/snm1, putative [Ixodes
scapularis]
gi|215508186|gb|EEC17640.1| DNA cross-link repair protein pso2/snm1, putative [Ixodes
scapularis]
Length = 248
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 405 VDAFKYLRGDCSHWFLTHFHMDHYQGLT--------RSFHHGKIYCSLITARLVNMKIGI 456
+D F + + + +FL+H H DH GL+ R+ K Y S ++ +L+ +
Sbjct: 16 IDRFDGINLNSTAFFLSHCHRDHMHGLSSTAFKTRLRARPDAKFYVSEVSRQLLLNEPKY 75
Query: 457 PWDRLQ--VLPLNQKTTIA--------GID----VTCLEANHCPGSIIILFEPQNGKAVL 502
W + LPL+ T+ G D VT + A HC GS++ L E G+ VL
Sbjct: 76 AWLKRHTIALPLDCPNTVTVPTNGDDHGPDYELVVTPISAEHCAGSVMFLLEGDCGR-VL 134
Query: 503 HTGDFRF----SEEMASMSVLQTCP--IHTLILDTTYCNPLYDF-PKQE----AVIQFVI 551
+TGDFR SE + ++ I +DTT C P + P +E A+I
Sbjct: 135 YTGDFRLAVGDSERLTALHEPSGAVKNIRCAYVDTTLCTPEAAYVPSREDSVAALITLAK 194
Query: 552 EAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKF 596
I A F L L G+ +G E LF ++ +++V ++
Sbjct: 195 PTILAGGF--LRLALPGA-QLGYEGLFAALSAHFEMRVHVTRSQM 236
>gi|338740681|ref|YP_004677643.1| hypothetical protein HYPMC_3867 [Hyphomicrobium sp. MC1]
gi|337761244|emb|CCB67077.1| conserved protein of unknown function [Hyphomicrobium sp. MC1]
Length = 339
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 124/295 (42%), Gaps = 36/295 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVN-MKIGIPWD---RLQVLPLNQKTTIAG 474
+TH H DH RS H L TA + MK+ D Q L L + +I G
Sbjct: 38 IITHGHSDH----ARSGHR----AVLATAETIAIMKVRYGEDCAGSFQALALGETISING 89
Query: 475 IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYC 534
+ V A H GS ++ E +AV+ +GD++ S + + + + P + + T+
Sbjct: 90 VRVRLAPAGHILGSAQVVIEWAGRRAVI-SGDYKRSSD-PTCTPFELVPCDVFVTEATFA 147
Query: 535 NPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR--VLRKKIYVN 592
P++ K Q ++ ++ AE P L+G+Y +GK + + V R K IY++
Sbjct: 148 LPVFRHEKAAHEAQKLLASLAAE---PDRTHLVGAYNLGKTQRMIRVVRDQGYDKPIYLH 204
Query: 593 AAKFRVLKC---LDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLI 649
A + + L D+Q + + ++ + M ++ + ++++ RF
Sbjct: 205 GAVASLTELYQKLGIDLGDLQLVSETDAKAIRGGIVMCPPSA------LGDRWSRRFGDP 258
Query: 650 VAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
V +GW +G+ + G + + S+H + EL + + E I
Sbjct: 259 VMAFASGWMRVRGRGRQHG--------VELPLVVSDHVDWPELIQTIIETEAEDI 305
>gi|393720788|ref|ZP_10340715.1| RNA procession exonuclease-like protein [Sphingomonas echinoides
ATCC 14820]
Length = 332
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 122/294 (41%), Gaps = 37/294 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T ++ + G + Q + + T
Sbjct: 34 LVTHGHADHARG-----GHGAVWATPETLAIMETRYGP--QAGHPIAYGQSQSFGDVTAT 86
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS IL E G+ ++ +GD++ + + + + P I + T+ P++
Sbjct: 87 FVPAGHVLGSAQILLE-YRGERIVVSGDYKRRAD-PTCAPFEPVPCDVFITEATFGLPVF 144
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P I + A+ A NP L+G+Y +GK +R+ E+ AR IY++ A
Sbjct: 145 RHPDTGDEIDKLTSALHA---NPTRCVLVGAYALGKAQRVIAELRARGHDAPIYIHGALE 201
Query: 597 RVLKCLD---FSKEDIQWFTT---NEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
R+ + + +++ TT E HI + P LA ++++ R +
Sbjct: 202 RLCALYEDHGVALGELRPATTASKAEMMGHIVLAPPGALA---------DRWSRRLPDPI 252
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+GW + + G + + S+H + EL + + ++P +
Sbjct: 253 TAMASGWMRVRQRAVQRG--------VELPLILSDHADWDELTDTLTEIAPREV 298
>gi|313244205|emb|CBY15039.1| unnamed protein product [Oikopleura dioica]
Length = 797
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 232 VDVSPVVEFLHS----LGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILH 287
VD+S VE LH LGL++Y F+++E+D T LT+ DL +G+T GPR+K+L
Sbjct: 704 VDISTQVE-LHEVFDYLGLSKYTTVFLQQEVDLQTFLSLTDSDLKELGITTFGPRRKMLL 762
Query: 288 TLCEIKKEYSRAVE 301
+ E+ K ++ V+
Sbjct: 763 AIQEMNKNRTQVVQ 776
>gi|348030481|ref|YP_004873167.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Glaciecola nitratireducens
FR1064]
gi|347947824|gb|AEP31174.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Glaciecola nitratireducens
FR1064]
Length = 338
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 139/310 (44%), Gaps = 44/310 (14%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQV-LPLNQKTTIAGIDV 477
+TH H DH + HG++Y + T ++ ++ G Q+ L N K + ++
Sbjct: 34 IITHGHADHARA-----GHGEVYATPETMAIMRIRYGEEHAEKQIELAYNDKIALNKGEL 88
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS + + + + V+ +GD++ S + S + + P + + T+ P+
Sbjct: 89 IFKPAGHILGSAQAVIDHNDHRLVI-SGDYKRSYD-PSCASFEVTPCDVFVTEATFGLPV 146
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARV-LRKKIYVNAAK 595
+ P + Q V + + + + P L+G Y +GK +R+ L + + K IY++ A
Sbjct: 147 FKHPP---INQEVNKLLASLALFPDRCHLVGVYALGKCQRVILALRELGYSKPIYMHGAL 203
Query: 596 FRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRL---------KHMSNQYAGRF 646
++ C +S I+ ++P+ + + K L ++++++ +
Sbjct: 204 LKL--CELYSSYGIELGN---------IVPVNDVENLKSLAGEIVLAPPSALNDRWSRKL 252
Query: 647 SLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIP 706
++ +GW + + K RR + II S+HC + EL + ++ V+P+ +
Sbjct: 253 PNVMTAMASGWMQIRARSKQ--RRAELPIII------SDHCDWPELLQTIEEVNPQEVWV 304
Query: 707 SVNNDGRDSA 716
+ GR++A
Sbjct: 305 T---HGREAA 311
>gi|302383452|ref|YP_003819275.1| mRNA 3'-end processing factor [Brevundimonas subvibrioides ATCC
15264]
gi|302194080|gb|ADL01652.1| mRNA 3'-end processing factor [Brevundimonas subvibrioides ATCC
15264]
Length = 359
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 123/297 (41%), Gaps = 42/297 (14%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRL-QVLPLNQKTTIAGIDVT 478
+TH H DH RS HG + + T +++ + G + L Q + + + G+D+
Sbjct: 48 VTHGHADH----ARS-GHGAVLATDQTIKIMAERYGEDFTALRQPVAYGETASHNGVDIR 102
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS + Q G ++ +GD++ + + + + P H I + T+ P++
Sbjct: 103 LVPAGHVLGSAQAVVTYQ-GLTMVVSGDYKRRRD-PTCTPFEPVPCHVFISEATFGLPVF 160
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR-----KKIYVNA 593
P + V +Q+ P L+G+Y +GK + V R+LR + IYV+
Sbjct: 161 THPPDA---EEVGRLVQSLGQFPDRAHLVGAYALGKAQ---RVIRLLREAGWERPIYVHG 214
Query: 594 AKFRVLKCLDFSKEDI------QWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
A R+ + + D+ + + + P + +++A RF+
Sbjct: 215 ALERLNRLYEREGVDLGPILPATGLKKDALGGEVAIAPP---------SAIQDRWARRFA 265
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
V +GW K + K G + + S+H + EL + + V PE +
Sbjct: 266 DPVTAFASGWMLVKARAKQRG--------VELPLVISDHADWPELIQTFEEVKPEEL 314
>gi|222106950|ref|YP_002547741.1| hypothetical protein Avi_6008 [Agrobacterium vitis S4]
gi|221738129|gb|ACM39025.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 337
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 122/294 (41%), Gaps = 38/294 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + H K+ + T ++ ++ G + Q + + T+ G+ V
Sbjct: 34 LITHGHSDHARA-----GHDKVLATRQTLDIMALRYGADFAGSSQAVDFGETVTLDGVAV 88
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E + G ++ +GD++ + A+ + P I + T+ P+
Sbjct: 89 GFHPAGHVLGSAQISIE-REGTRIVVSGDYKRRPD-ATCAAFVPVPCDVFITEATFALPV 146
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARV--LRKKIYVNAAK 595
+ P I ++ ++ E F P+ L+G+Y +GK + + + R + IY++ A
Sbjct: 147 FHHPDPALEIGKLLRSL--EQF-PQRSHLVGAYALGKAQRVISLIRQAGYDRPIYIHGAL 203
Query: 596 FRV--------LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
++ ++ + ++ +N E I + P A +++A RF
Sbjct: 204 AKLCDYYQSQGIELGELHPATVESGGSNHFEGAIVIGPPSAFA---------DRWARRFH 254
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
+ +GW + + K G + + S+HC + EL E + + P
Sbjct: 255 DPLPIFASGWMMVRQRAKQRG--------VELPLVISDHCDWPELIETISELQP 300
>gi|91089717|ref|XP_974970.1| PREDICTED: similar to bicaudal-c [Tribolium castaneum]
gi|270011313|gb|EFA07761.1| hypothetical protein TcasGA2_TC005315 [Tribolium castaneum]
Length = 744
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 240 FLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
L +LGL RY F+R E+D T L+++DL+ IGVTA G R+K+L + E+ K
Sbjct: 658 LLSALGLDRYISLFIRHEVDLPTFTTLSDKDLMTIGVTAFGSRRKMLLAISELNK 712
>gi|398830142|ref|ZP_10588336.1| putative exonuclease, DNA ligase-associated [Phyllobacterium sp.
YR531]
gi|398215851|gb|EJN02412.1| putative exonuclease, DNA ligase-associated [Phyllobacterium sp.
YR531]
Length = 338
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 133/329 (40%), Gaps = 48/329 (14%)
Query: 390 KDIPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARL 449
+ P P F +D + +TH H DH RS H K+ + T +
Sbjct: 10 RSTPAGLYSPAGDFYIDPIR----PVDRALITHGHSDH----ARSGHR-KVMATQQTLDI 60
Query: 450 VNMKIGIPW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFR 508
+ ++ G + + Q L + T + G+ ++ A H GS I E + G ++ +GD++
Sbjct: 61 MALRYGADFAEETQTAELGKSTEVNGVTISFHPAGHVLGSAQIAVE-KEGMRIVASGDYK 119
Query: 509 FSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIG 568
+ + + I + T+ P++ P I +++++ E F P+ L+G
Sbjct: 120 RRADPTCLG-FEPVACDVFITEATFALPVFRHPNSRDEIAKLLKSV--EQF-PERSHLVG 175
Query: 569 SYTIGKERLFLEVARVLR-----KKIYVNAAKFRV--------LKCLDFSKEDIQWFTTN 615
+Y +GK + V R+LR + IY++ A ++ +K + I+ +
Sbjct: 176 AYALGKAQ---RVIRLLRDAGYDRTIYIHGALAKLCDYYETQGIKLGPLAPATIEKGSVA 232
Query: 616 EHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGT 675
+ I V P +++A RF V+ +GW + + + G
Sbjct: 233 DFAGAIVVGPP---------SAFLDRWARRFPDPVSCFASGWMRIRQRARQGG------- 276
Query: 676 IIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+ + S+HC + EL + + + P +
Sbjct: 277 -VELPIILSDHCDWDELTDTITELHPSQV 304
>gi|310823805|ref|YP_003956163.1| hypothetical protein STAUR_6579 [Stigmatella aurantiaca DW4/3-1]
gi|309396877|gb|ADO74336.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
Length = 336
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 20/201 (9%)
Query: 383 QSKGRKHKDIP-------TWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSF 435
Q++G + +P T + GTP +DA + F++H H DH
Sbjct: 2 QAQGALYPGLPMSVELRRTGLHLTGTPLALDAMR----KTPLSFVSHGHSDHIA------ 51
Query: 436 HHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEP 495
H + + T R + ++G D + V NQ + + + L A H GS +
Sbjct: 52 RHERTIATAATLRFMAHRLGPVKDPMAVA-YNQPFELGPLTLEVLSAGHILGSAQLRVVR 110
Query: 496 QNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQ 555
+G+ +++TGD + + + V Q TL+++ T+ +P Y FP ++ V+ V ++
Sbjct: 111 GDGRRIVYTGDLNVTPSLTAEPV-QVAECDTLVIEATFGHPRYRFPPKDEVLGAVETWVR 169
Query: 556 AESFNPKTLFLIGSYTIGKER 576
+ L+G Y +GK +
Sbjct: 170 QQLERGAVPVLLG-YPLGKSQ 189
>gi|326673416|ref|XP_002665962.2| PREDICTED: protein bicaudal C homolog 1-A-like [Danio rerio]
Length = 848
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 224 LGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRK 283
+GRSP A ++E L LGL +Y + F ++EID+ T L++EDL +GV+ G R+
Sbjct: 741 IGRSPSPA-HADDLIELLAQLGLEKYIDIFQQQEIDYQTFLTLSDEDLKEVGVSTFGARR 799
Query: 284 KILHTLCEIKKE 295
K+L + ++ K+
Sbjct: 800 KMLLAIADLSKK 811
>gi|326429130|gb|EGD74700.1| hypothetical protein PTSG_06061 [Salpingoeca sp. ATCC 50818]
Length = 920
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 233 DVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
+V + E L LGL Y+ F +EEID LTE+DLI IGVT G R+K+L + +
Sbjct: 826 NVRSLPELLAKLGLNSYDSLFAKEEIDLAIFLTLTEDDLINIGVTTFGARRKMLLAISNL 885
Query: 293 KK 294
K+
Sbjct: 886 KE 887
>gi|296220631|ref|XP_002756390.1| PREDICTED: protein bicaudal C homolog 1 [Callithrix jacchus]
Length = 954
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K R
Sbjct: 860 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRR 919
Query: 299 AVES-NKDAHVSNDGSSSYHGSERHKEASKV 328
ES N G+S + H + + V
Sbjct: 920 LFESPNARTSFLEGGASGRLPRQYHSDVASV 950
>gi|399994820|ref|YP_006575052.1| hypothetical protein PGA1_262p00510 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398659368|gb|AFO93333.1| hypothetical protein PGA1_262p00510 [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 337
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/297 (20%), Positives = 128/297 (43%), Gaps = 41/297 (13%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH + HG ++ S T ++ ++ G + ++ + T + GI V
Sbjct: 37 MITHGHADHARA-----GHGTVWASPQTLDIMAIRYGEDFCATRIA-VEGSTEVDGIGVR 90
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H GS I + N A+ +GD+ + A S Q P + + T+ P++
Sbjct: 91 FTPAGHVLGSCQITVD-DNSTAITVSGDYARVDNPACAS-FQLAPCDVFVTEATFGLPVF 148
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARV--LRKKIYVNAA-- 594
+ P + I+ ++ ++ A+ P+ L+G+Y +GK + + + R + IY++ A
Sbjct: 149 NHPTPHSEIEKLLRSVAAQ---PERCHLVGAYALGKAQRVIALLRQAGWDQPIYIHGALQ 205
Query: 595 ---KFRVLKCLDFSKEDIQWFTTNEHES----HIHVMPMWTLASFKRLKHMSNQYAGRFS 647
+ + + +D +++ TT E ++ I + P A+ +A RF
Sbjct: 206 RLCDYHIAQGVDLG--ELRPATTKEGKAAFKGQIILGPPSAFAA---------TWAQRFP 254
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
V +GW + + + G + + S+H + +L ++ ++P+ +
Sbjct: 255 DPVICFASGWMQVRARARQRG--------VELPLILSDHVDWPDLTRTIRDLNPKQV 303
>gi|254467238|ref|ZP_05080649.1| mRNA 3'-end processing factor [Rhodobacterales bacterium Y4I]
gi|206688146|gb|EDZ48628.1| mRNA 3'-end processing factor [Rhodobacterales bacterium Y4I]
Length = 337
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 124/293 (42%), Gaps = 33/293 (11%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH + HG ++ S T ++ ++ G + ++ P+ +T GI V
Sbjct: 37 MITHGHADHARA-----GHGTVWASPQTLDIMAIRYGEAFCDTRI-PVEGQTEAGGIRVA 90
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H GS I E A+ +GD+ + A + Q P + + T+ P++
Sbjct: 91 FTPAGHVLGSCQITVE-DGSTAITVSGDYARVDNPAC-APFQLAPCDIFVTEATFGLPVF 148
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARV--LRKKIYVNAA-- 594
+ P + I+ ++ ++ A+ P L+G+Y +GK + + + R + IY++ A
Sbjct: 149 NHPAPLSEIEKLLRSVAAQ---PDRCHLVGAYALGKAQRVIALLRQAGWEQPIYIHGALQ 205
Query: 595 ---KFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA 651
+ + + +D D++ TT + ++ + S + +A RF V
Sbjct: 206 RLCDYHIEQGVDLG--DLRPATTGDGKAAFKGQIILGPPS-----AFAATWAQRFPDPVI 258
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+GW + + + G + + S+H + +L ++ ++P +
Sbjct: 259 CFASGWMQVRARARQRG--------VELPLILSDHADWQDLTRTIQELAPRQV 303
>gi|44662801|ref|NP_981965.1| bicaudal C homolog 2 [Danio rerio]
gi|42433228|gb|AAS16478.1| bicaudal-C [Danio rerio]
Length = 846
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 224 LGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRK 283
+GRSP A ++E L LGL +Y + F ++EID+ T L++EDL +GV+ G R+
Sbjct: 739 IGRSPSPA-HADDLIELLAQLGLEKYIDIFRQQEIDYQTFLTLSDEDLKEVGVSTFGARR 797
Query: 284 KILHTLCEIKKE 295
K+L + ++ K+
Sbjct: 798 KMLLAIADLSKK 809
>gi|401428799|ref|XP_003878882.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495131|emb|CBZ30435.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 670
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Query: 646 FSLIVAFSPTGWTFSKGKKKSPGRRW-QQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+ ++ PTGW K+ R Q+ T++R VPYSEHC+F EL EFV+FV+P +
Sbjct: 437 YDQVLIVEPTGWC-----KRCVAREVSQKYTLLR--VPYSEHCAFHELLEFVEFVNPARV 489
Query: 705 IPSVNNDG 712
+P+V+ +G
Sbjct: 490 VPTVSEEG 497
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 37/77 (48%), Gaps = 19/77 (24%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIE---------AIQAESFNPKT----------L 564
+ L+LD T+C P Y FP Q V Q VIE A +A P T
Sbjct: 158 LDVLLLDNTFCAPAYRFPSQWEVTQRVIEVLRSLFHRAACRAGVAVPSTGHPQRRQVRCA 217
Query: 565 FLIGSYTIGKERLFLEV 581
LIGSYTIGKER+ L +
Sbjct: 218 VLIGSYTIGKERVALAL 234
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 467 NQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
++KT V + ANHCPG+++ LF VLHTGDFRF+
Sbjct: 45 HEKTGDGMFAVRLILANHCPGAVMFLFASPVFGTVLHTGDFRFN 88
>gi|299746247|ref|XP_001837843.2| hypothetical protein CC1G_09825 [Coprinopsis cinerea okayama7#130]
gi|298406968|gb|EAU83943.2| hypothetical protein CC1G_09825 [Coprinopsis cinerea okayama7#130]
Length = 876
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 45/133 (33%)
Query: 419 FLTHFHMDHYQGLT-RSFHHGKIYCSLITARLV-------------------------NM 452
LTH H DH GL RSF + +YCS +++ ++
Sbjct: 33 LLTHTHSDHINGLAARSFGYN-VYCSEDAKQMLLRHEVYAEREYHEKDLRAEKIRTFSHL 91
Query: 453 KI-------GIPW-----DRLQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEP 495
K+ G + D L+ LPL++ T + + +T L+ANHCPG+++ L E
Sbjct: 92 KVDPLVHADGTLYYQGSRDLLKTLPLHKPTRMDLDANESVTITLLDANHCPGAVMFLIEG 151
Query: 496 QNGKAVLHTGDFR 508
G AVLHTGDFR
Sbjct: 152 PRG-AVLHTGDFR 163
>gi|110668252|ref|YP_658063.1| mRNA cleavage and polyadenylation specificity factor-like protein
[Haloquadratum walsbyi DSM 16790]
gi|109625999|emb|CAJ52447.1| homolog to mRNA 3'-end processing factor [Haloquadratum walsbyi DSM
16790]
Length = 332
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 123/292 (42%), Gaps = 40/292 (13%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
++H H DH G+I S +T L +++ + + P +K T +D+
Sbjct: 39 VSHAHGDHLVDTA-----GEIVASELTVALASVR------QSECKP--EKITHPAVDL-- 83
Query: 480 LEANHCPGS-IIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS ++L +P+ L+TGD R S+ + + LIL+TTY +P Y
Sbjct: 84 IPAGHIAGSRAVLLTDPETDCRYLYTGDCRLSDRL-YLDGFDPVDADVLILETTYGDPKY 142
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAAKFR 597
FP E + E + + LF Y +G+ ++L + + R ++++ A
Sbjct: 143 RFPSPEKTHNRIREWLAQTMDDVVILF---GYALGRAQKLQVLLESTARSRVFITDAIAE 199
Query: 598 VLKCLDFSKE---DIQWFTTNE--HESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAF 652
+ ++ E D + +TT+ V+PM T RL + + ++ F
Sbjct: 200 LNAVIESRHEISFDARRYTTDVTLQPGDAVVLPMQT----TRLGWIESLIETTDAITAGF 255
Query: 653 SPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
S GW G +G ++ S+HC + EL E V V PE +
Sbjct: 256 S--GWAIDDSFIYQRG--VDKGFVL------SDHCDYDELIELVTTVDPERV 297
>gi|440803638|gb|ELR24523.1| SAM domain (Sterile alpha motif) domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 600
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
+ +L LGL +Y + FV EEID DTL +LTEE L +GV+ +G R KIL + +++ E
Sbjct: 296 ITVWLSGLGLRKYVDKFVHEEIDVDTLPYLTEEHLEKLGVSTIGARLKILAAVDQLRDEQ 355
Query: 297 S 297
+
Sbjct: 356 A 356
>gi|341613811|ref|ZP_08700680.1| hypothetical protein CJLT1_02622 [Citromicrobium sp. JLT1363]
Length = 344
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 131/304 (43%), Gaps = 50/304 (16%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKI---------GIPWDRLQVLPLNQK 469
+TH H DH +G HG + + T ++ ++ IP + +P+
Sbjct: 35 LVTHGHADHARG-----GHGTTFATPETLAIMELRYRTGAEDDAGDIP---HKAMPVRYG 86
Query: 470 TTI---AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHT 526
TI G+D T + A H GS IL E G+ ++ TGD++ + + + P
Sbjct: 87 ETIRLKGGVDATYIPAGHVLGSAQILLE-HAGERIVVTGDYKRRPD-PTCPPFEVTPCDI 144
Query: 527 LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARV 584
I + T+ P++ P + + + + A +P + L+G+Y +GK +R+ E+ A
Sbjct: 145 FITEATFGLPVFTHPPIAGEMAKLTDRLAA---HPDSCVLVGAYALGKAQRVIAELRAAG 201
Query: 585 LRKKIYVNAAKFRVLKCLDFSKEDIQWF------TTNEHESHIHVMPMWTLASFKRLKHM 638
IY++ A ++ + + D+ T ++ HI V P L
Sbjct: 202 HTDPIYLHGAMEKMCRLYEEHGVDLGELRLVSDHTKDDMRGHIVVCPPSAL--------- 252
Query: 639 SNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKF 698
+++++ R + +GW + ++++ R + +I S+H + EL + ++
Sbjct: 253 NDRWSRRLPDPITAMASGWM--RVRQRARQRNVELPLVI------SDHADWGELTDTIRE 304
Query: 699 VSPE 702
V+P+
Sbjct: 305 VNPQ 308
>gi|335034724|ref|ZP_08528070.1| hypothetical protein AGRO_2052 [Agrobacterium sp. ATCC 31749]
gi|333793924|gb|EGL65275.1| hypothetical protein AGRO_2052 [Agrobacterium sp. ATCC 31749]
Length = 352
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 128/301 (42%), Gaps = 46/301 (15%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T ++ ++ G + Q + + + G+ V
Sbjct: 49 LITHGHSDHARA-----GHGAVLATRQTLDIMRIRYGEDFCGSEQAVGFGETVEVNGVTV 103
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E NG ++ +GD++ + + + +T P I + T+ P+
Sbjct: 104 GFHPAGHVLGSAQISVE-MNGLRIVASGDYKRGID-PTCAPFETVPCDVFITEATFGLPV 161
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK-----IYVN 592
+ P I ++ +I+ P L+G+Y++GK + V R+LR IY++
Sbjct: 162 FHHPLPRVEIGKLLTSIKQ---FPDRTHLVGAYSLGKAQ---RVIRLLRDNGYADPIYIH 215
Query: 593 AAKFRV--------LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG 644
A R+ + D ++ + I V P ++F+ ++A
Sbjct: 216 GALARLCDYYVSQGVDLGDLRPATLEKSNPAAFKGAIVVGPP---SAFQ------ERWAR 266
Query: 645 RFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
RF+ ++AF+ +GW + + K G + + S+HC + EL E + + P+
Sbjct: 267 RFNEPLIAFA-SGWMMVRQRAKQGG--------VELPLVISDHCDWPELLETITEIGPQA 317
Query: 704 I 704
+
Sbjct: 318 V 318
>gi|227206214|dbj|BAH57162.1| AT1G70180 [Arabidopsis thaliana]
Length = 372
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
V FL+S+GL +Y AF REE+D T++ + E DL + + +GPRKKIL + +
Sbjct: 315 VDGFLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDL-IIPMGPRKKILQAIASL 369
>gi|427407578|ref|ZP_18897780.1| hypothetical protein HMPREF9718_00254 [Sphingobium yanoikuyae ATCC
51230]
gi|425714082|gb|EKU77093.1| hypothetical protein HMPREF9718_00254 [Sphingobium yanoikuyae ATCC
51230]
Length = 330
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/285 (19%), Positives = 121/285 (42%), Gaps = 25/285 (8%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G H ++ + T ++ ++ G + +++ + G+ +
Sbjct: 31 LVTHGHADHARG-----GHRHVWATRETLAIMALRYGTA--SGTAVGYDEEIRLGGVTIR 83
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS I+ + G+ V+ TGD++ + + + P + + T+ P++
Sbjct: 84 YVPAGHVLGSAQIILD-HAGERVVVTGDYKRRADPTCLP-FEPVPCDIFVTEATFGLPVF 141
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P + + ++ A+ A NP L+G+Y +GK +R+ E+ AR IY++ A
Sbjct: 142 RHPDTGSEMDRLLHALHA---NPDRCVLVGAYALGKAQRVICELRARGHHDPIYIHGALE 198
Query: 597 RVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTG 656
R+ D+ + + LA L +++++ R +A +G
Sbjct: 199 RMCALYQDLGVDMGQLRGATGVAAKDMRGAIVLAPPSAL---NDRWSRRLPDPIAAMASG 255
Query: 657 WTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSP 701
W + + + + + S+H + EL + ++ V+P
Sbjct: 256 WMRVRQRARQRN--------VELPLVISDHADWDELTDTIREVAP 292
>gi|126461846|ref|YP_001042960.1| putative mRNA 3-end processing factor [Rhodobacter sphaeroides ATCC
17029]
gi|126103510|gb|ABN76188.1| putative mRNA 3-end processing factor [Rhodobacter sphaeroides ATCC
17029]
Length = 383
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH RS HG + +A ++ ++G RL+ + + I G+ V+
Sbjct: 33 LITHGHSDH----ARS-GHGAYLATEGSAPVIRYRLGD--IRLKTIRYGETRRIGGVTVS 85
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H PGS I E +NG+ + +GD++ +E+ S + H+ I + T+ P++
Sbjct: 86 FHPAGHVPGSAQIRVE-RNGEVWVVSGDYKVAEDGLS-EPFEPVTCHSFISECTFGLPVF 143
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ Q + + A + +T ++G+YT+GK + L A + I + A
Sbjct: 144 RWKPQAELAAQLNRWWAANAAEGRTS-IVGAYTLGKAQRLLVSADLSIGPILTHGA 198
>gi|384082040|ref|ZP_09993215.1| hypothetical protein gproHI_01935 [gamma proteobacterium HIMB30]
Length = 353
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 99/223 (44%), Gaps = 32/223 (14%)
Query: 384 SKGRKHKD-----IPTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHG 438
SK +H+D P P +D ++ + DC+ +TH H DH + ++ +H
Sbjct: 16 SKKSRHRDPLIIRTPQGLYCPKAAAHIDPWRPV--DCA--LITHAHADHARAGSKHYH-- 69
Query: 439 KIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNG 498
C+L L+ ++G R+ P + + + ++ A H GS I + +
Sbjct: 70 ---CALGGEGLLEKRLGP--QRIDAHPYGEPFVLGDVQISFHPAGHVLGSAQIRIDDGDA 124
Query: 499 KAVLHTGDFRFSEEMASMSVLQTC----PIH--TLILDTTYCNPLYDFPKQEAVIQFVIE 552
V+ TGD++ + TC PIH LI + T+ P+Y +P + V++ +
Sbjct: 125 VWVI-TGDYKRDPD-------PTCQRFEPIHCDVLITEATFALPIYRWPSMDQVMEHMFR 176
Query: 553 AIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAA 594
N +T L+ Y++GK +R+ E+ + + + V+ A
Sbjct: 177 WWDHHIRNQRTPVLL-CYSLGKAQRIMAEIRQRSDRSVQVHGA 218
>gi|115372641|ref|ZP_01459948.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
gi|115370362|gb|EAU69290.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
Length = 324
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 13/177 (7%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
GTP +DA + F++H H DH H + + T R + ++G D
Sbjct: 14 GTPLALDAMR----KTPLSFVSHGHSDHIA------RHERTIATAATLRFMAHRLGPVKD 63
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ V NQ + + + L A H GS + +G+ +++TGD + + + V
Sbjct: 64 PMAVA-YNQPFELGPLTLEVLSAGHILGSAQLRVVRGDGRRIVYTGDLNVTPSLTAEPV- 121
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKER 576
Q TL+++ T+ +P Y FP ++ V+ V ++ + L+G Y +GK +
Sbjct: 122 QVAECDTLVIEATFGHPRYRFPPKDEVLGAVETWVRQQLERGAVPVLLG-YPLGKSQ 177
>gi|449666663|ref|XP_004206395.1| PREDICTED: uncharacterized protein LOC101241588, partial [Hydra
magnipapillata]
Length = 1063
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
+ E LGL +Y EAF +EE+D T LT++DL +GV+ G RKK+ + + + K+
Sbjct: 593 IGELFSKLGLEQYTEAFQKEEVDLSTFMSLTDDDLKELGVSTFGARKKMSNAMKD-KQVE 651
Query: 297 SRAVESNKDAHVSNDGSSSY 316
S E+N ++++ SSS+
Sbjct: 652 SDDSETNISKEITSEASSSF 671
>gi|321456674|gb|EFX67775.1| hypothetical protein DAPPUDRAFT_330715 [Daphnia pulex]
Length = 806
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 240 FLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKE 295
LHS+GL +Y E FV EID + + LTE +L +G+ A G R+++L T+ E+ K+
Sbjct: 729 LLHSMGLTKYIELFVEHEIDLELFKTLTENELRDLGIHAFGVRRRMLLTIAELNKK 784
>gi|22330538|ref|NP_177175.2| Sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
gi|17473774|gb|AAL38323.1| unknown protein [Arabidopsis thaliana]
gi|32189311|gb|AAP75810.1| At1g70180 [Arabidopsis thaliana]
gi|332196908|gb|AEE35029.1| Sterile alpha motif (SAM) domain-containing protein [Arabidopsis
thaliana]
Length = 460
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
V FL+S+GL +Y AF REE+D T++ + E DL + + +GPRKKIL + +
Sbjct: 403 VDGFLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDL-IIPMGPRKKILQAIASL 457
>gi|407851646|gb|EKG05451.1| hypothetical protein TCSYLVIO_003474 [Trypanosoma cruzi]
Length = 522
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 65/157 (41%), Gaps = 44/157 (28%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIP 457
VP P +D F + + L+HFH DH +GL+ S+ G I C +T L+ K G
Sbjct: 3 VPRFPVYIDQFYSEDNPDAVYLLSHFHTDHMKGLSHSWCAGLIICEAVTRALLIQKYGGC 62
Query: 458 WDRLQV-LPLNQK-------TTIA---------------------GIDVTC--------- 479
++ V LPL Q+ TTI+ G D C
Sbjct: 63 MEKCSVSLPLFQRTPFLRMVTTISSKVAPDSVEEREVVLDTVKDNGSDENCGSNFGEDEM 122
Query: 480 -----LEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
L A H PGS++ E G VL+TGDF++ E
Sbjct: 123 VMLYLLPAFHIPGSVMFFLETPFGN-VLYTGDFKYDE 158
>gi|357616635|gb|EHJ70295.1| putative Artemis protein [Danaus plexippus]
Length = 437
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 34/211 (16%)
Query: 418 WFLTHFHMDHYQGL-------TRSFHHGKIYCSLITARL----VNMKIGIPWDRLQVLPL 466
+FL+H H DH GL T KIY + ++A + VN IG D +Q L +
Sbjct: 35 YFLSHCHADHMHGLSSEELMATLKKSGAKIYTTELSAAIIKTDVNKDIG---DHVQSLKM 91
Query: 467 NQKTTIAG------------IDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS-EEM 513
++ + VT + A H GS + LF K +L TGDFR + ++
Sbjct: 92 GGTQILSFPSIPEQNIPELLLTVTLIPAGHSAGSTMFLFR-TTTKTILFTGDFRMNPNDL 150
Query: 514 ASMSVLQT----CPIHTLILDTTYCNPLYD-FPKQ-EAVIQFVIEAIQAESFNPKTLFLI 567
S L + +L +DTT+ + YD FPK+ E++ + E + S+ + L
Sbjct: 151 PKYSALHDDGHPIKLTSLYVDTTFLSYNYDNFPKRSESIEKMCSEIKKWLSYEQNAVSLH 210
Query: 568 GSYTIGKERLFLEVARVLRKKIYVNAAKFRV 598
S G E F E+ R L K++V ++ +
Sbjct: 211 TSAKYGYEFAFNEIYRRLGLKVHVPTERWSL 241
>gi|254477983|ref|ZP_05091368.1| mRNA 3'-end processing factor [Ruegeria sp. R11]
gi|214028568|gb|EEB69404.1| mRNA 3'-end processing factor [Ruegeria sp. R11]
Length = 339
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH + HG ++ S T ++ ++ G + + ++ P+ + IA + T
Sbjct: 39 LITHGHADHARA-----GHGTVWASRQTLDIMAIRYGEDFCQTRI-PVEDRVDIAEVRAT 92
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H GS+ I + N A+ +GD+ + A + P + + T+ P++
Sbjct: 93 FTPAGHVLGSMQITVDDGN-TAITVSGDYARVDNPAC-AAFALAPCDVFVTEATFGLPVF 150
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARV--LRKKIYVNAAKF 596
+ P ++ ++ ++ ++ A+ P L+G+Y +GK + + + R + IY++ A
Sbjct: 151 NHPSPQSEVEKLLRSVAAQ---PDRCHLVGAYALGKAQRVIALLRQAGWDRPIYIHGALQ 207
Query: 597 RV 598
R+
Sbjct: 208 RL 209
>gi|159184490|ref|NP_353861.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|159139799|gb|AAK86646.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 331
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 128/301 (42%), Gaps = 46/301 (15%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T ++ ++ G + Q + + + G+ V
Sbjct: 28 LITHGHSDHARA-----GHGAVLATRQTLDIMRIRYGEDFCGSEQAVGFGETVEVNGVIV 82
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E NG ++ +GD++ + + + +T P I + T+ P+
Sbjct: 83 GFHPAGHVLGSAQISVE-MNGLRIVASGDYKRGID-PTCAPFETVPCDVFITEATFGLPV 140
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKK-----IYVN 592
+ P I ++ +I+ P L+G+Y++GK + V R+LR IY++
Sbjct: 141 FHHPLPRVEIGKLLTSIKQ---FPDRTHLVGAYSLGKAQ---RVIRLLRDNGYADPIYIH 194
Query: 593 AAKFRV--------LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG 644
A R+ + D ++ + I V P ++F+ ++A
Sbjct: 195 GALARLCDYYVSQGIDLGDLRPATLEKSNPAAFKGAIVVGPP---SAFQ------ERWAR 245
Query: 645 RFS-LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEH 703
RF+ ++AF+ +GW + + K G + + S+HC + EL E + + P+
Sbjct: 246 RFNEPLIAFA-SGWMMVRQRAKQGG--------VELPLVISDHCDWPELLETITEIGPQA 296
Query: 704 I 704
+
Sbjct: 297 V 297
>gi|326435202|gb|EGD80772.1| hypothetical protein PTSG_11713 [Salpingoeca sp. ATCC 50818]
Length = 744
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 208 PKHERGPRLEPEIDLGLGRSPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLT 267
PK G + E++LGLG DV V E L L L +Y F + E+D+ L ++
Sbjct: 302 PKQPSGRQRAAELNLGLG-------DVRDVHELLKCLNLEKYIPVFDKAEVDFKLLLNMS 354
Query: 268 EEDLIGIGVTALGPRKKILHTLCEIKKEYSRAVESNKDAHVSNDGSSS 315
E DL IG+ GPR+KI + + +K +S + +N GSS+
Sbjct: 355 EHDLKEIGIAVFGPRRKIYNAVQRLK------AKSTTPTNHTNSGSSN 396
>gi|422293132|gb|EKU20432.1| hydrolase involved in interstrand cross-link repair
[Nannochloropsis gaditana CCMP526]
Length = 223
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 13/73 (17%)
Query: 649 IVAFSPTGWTFSKGKKKS------------PGRRWQQGTIIRYEVPYSEHCSFTELKEFV 696
+V F PTGW++ + +K + P Q G + Y VPYSEH S+TEL+ FV
Sbjct: 29 VVGFRPTGWSYLRNRKTARDACPSSPSSYTPWVNPQNGAKL-YWVPYSEHSSYTELRSFV 87
Query: 697 KFVSPEHIIPSVN 709
+ + P IIP+V
Sbjct: 88 RAIRPRKIIPTVG 100
>gi|328856655|gb|EGG05775.1| hypothetical protein MELLADRAFT_77991 [Melampsora larici-populina
98AG31]
Length = 723
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 60/246 (24%)
Query: 418 WFLTHFHMDHYQGL-TRSFHHGKIYCSLITAR-LVNMKI-----------------GIPW 458
+ L+H H DH GL T + IYCS IT ++N K +
Sbjct: 35 YLLSHIHSDHTNGLNTFNDQDLFIYCSFITKETILNTKTFNQRYPLKSTSPSKKSKEYKF 94
Query: 459 DRLQVLPLNQKTTIAGID-----------------VTCLEANHCPGSIIILFEPQNGKAV 501
+ LQ P + ++ +T +ANHCPGS++ L + N K+V
Sbjct: 95 ENLQQHPFLKAISLRKPTEIILKPTENPDENQTCCITLFDANHCPGSVMFLIQMWN-KSV 153
Query: 502 LHTGDFR----FSEEMASMSVLQTCPI-------------HTLI-LDTTYCNPLYDFPKQ 543
L+TGD R + E + S+L P H I LD Y + K+
Sbjct: 154 LYTGDIRAEPWWIESLTKESIL--APFLDFNHAHQFSNHHHNRIKLDNIYLDTSGLVYKK 211
Query: 544 EAVI--QFVIEAIQAESFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLK 600
+ + Q ++ ++ SF P T+F I ++T G E L ++ + I+V+ KF +
Sbjct: 212 DVLTKEQAILSTLRLMSFYPDDTIFFINTWTWGWEELLERISIHFQTLIHVDQYKFDLYT 271
Query: 601 CLDFSK 606
+F K
Sbjct: 272 LPNFEK 277
>gi|430002709|emb|CCF18490.1| putative metallo-hydrolase/oxidoreductase [Rhizobium sp.]
Length = 336
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 132/297 (44%), Gaps = 38/297 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HGK+ + T ++ ++ G + Q + ++ + G+ V
Sbjct: 33 LITHGHSDHARA-----GHGKVLATRQTLDIMRIRYGEDFCGSEQAVEFGERVEVDGVTV 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS IL + ++G + +GD++ + S + I + T+ P+
Sbjct: 88 CFHPAGHVLGSAQILIQ-KDGLRINVSGDYKRGTDPTCAS-FEPVACDVFITEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR--VLRKKIYVNAAK 595
+ P + I ++ +++ P+ +IG+Y +GK + + + R + IY++ A
Sbjct: 146 FHHPDPKGEIGKLLTSLKQ---FPERSHMIGAYALGKAQRVIRLIRDCGYHEPIYIHGAL 202
Query: 596 FRVLKCLDFSKEDIQW-------FTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS- 647
R+ C + ++ I+ + ++ + + ++F+ +++A RF+
Sbjct: 203 GRL--CDYYREQGIELGDIRPATLEKKDPDAFKGAVVVGPPSAFQ------DRWARRFNE 254
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
++AF+ +GW + + K G + + S+HC + EL E ++ V P +
Sbjct: 255 PLIAFA-SGWMMVRQRAKQGG--------VELPLVISDHCDWPELLETIREVGPSEV 302
>gi|321457320|gb|EFX68409.1| hypothetical protein DAPPUDRAFT_330141 [Daphnia pulex]
Length = 452
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIK 293
+FL ++GL+ Y + F+R EID L +EDLI IGVT+ G RK +L+ + E++
Sbjct: 397 DFLGTVGLSHYSDLFLRNEIDMAMFTTLKDEDLISIGVTSFGARKILLNAIQELR 451
>gi|312074317|ref|XP_003139916.1| hypothetical protein LOAG_04331 [Loa loa]
gi|307764918|gb|EFO24152.1| hypothetical protein LOAG_04331 [Loa loa]
Length = 376
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 106/271 (39%), Gaps = 42/271 (15%)
Query: 473 AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCP--------I 524
+ DVT L+A H PGS +ILFE NG +L+TGD R S++ + P +
Sbjct: 70 SSADVTFLDAQHIPGSAMILFEFHNGFRLLYTGDCRLSKDDWIACQILKDPFTSSGFKRL 129
Query: 525 HTLILDTTYC-NPLYDFPKQEAVIQFVIEAIQ---AESFNPKTLFLIGSYTIGKERLFLE 580
L D+T+C + P +E ++ + N K L G + G E L
Sbjct: 130 DALYFDSTFCRREAENIPSLRQSCALCVEMVKEWLEKDSNNKVLIWCGKF--GHELLLKA 187
Query: 581 VARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVM---PMWTL-------- 629
+ L K +V K+R+ ++F + I T ++ +H P T
Sbjct: 188 IWDELHIKCHVTMMKYRIYSKINFLADCI---TPVARDTRVHACTTKPSLTEEVFYENNQ 244
Query: 630 ---------ASFKRLKHMSNQYAGRFSLIVAFSPTG-WTFSKGKKKSPGRRWQQGTIIRY 679
SFK+ Q + + P+ W + KK G ++ R
Sbjct: 245 SVVAKKKGDVSFKQKMSTCWQCRPDHNSVRVIKPSAIWFLRRNKKNMLG--YENNRFCR- 301
Query: 680 EVPYSEHCSFTELKEFVKFVSPEHIIPSVNN 710
+ Y+ HCS +E++ + P P+V +
Sbjct: 302 -LFYAGHCSVSEMENAFSLLKPVCAYPNVTD 331
>gi|377810775|ref|YP_005043215.1| adenylate/guanylate cyclase [Burkholderia sp. YI23]
gi|357940136|gb|AET93692.1| adenylate/guanylate cyclase [Burkholderia sp. YI23]
Length = 1075
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
V +L SLG+ RYE AF ID D L+ LT +DL +G+ ++G R+++L L E++ +
Sbjct: 3 VAVWLRSLGMERYEPAFRENAIDEDVLRQLTADDLKELGIASVGHRRRLLDALAELRAQA 62
Query: 297 SRAVESNKDAHV 308
S A + V
Sbjct: 63 SEATGERRQVAV 74
>gi|297838807|ref|XP_002887285.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333126|gb|EFH63544.1| sterile alpha motif domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 444
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
V FL+S+GL +Y AF REE+D T++ + E DL + + +GPRKKIL + +
Sbjct: 387 VDGFLNSIGLGKYSLAFKREEVDMTTIKQMKESDLKDL-IIPMGPRKKILQAIASL 441
>gi|414176347|ref|ZP_11430576.1| hypothetical protein HMPREF9695_04222 [Afipia broomeae ATCC 49717]
gi|410886500|gb|EKS34312.1| hypothetical protein HMPREF9695_04222 [Afipia broomeae ATCC 49717]
Length = 343
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 116/276 (42%), Gaps = 21/276 (7%)
Query: 396 CCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG 455
CC PG F +D + + +TH H DH + HG + + T ++ ++ G
Sbjct: 15 CCKPGG-FHIDPVRPVE----RALITHGHSDHARP-----GHGAVLATQETLDIMRLRYG 64
Query: 456 IPW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMA 514
+ Q + N+ + G+ VT A H GS I K ++ +GD++ + +
Sbjct: 65 DNFAGSTQAISYNETIKLGGVSVTFHPAGHVLGSAQIAVSSGKTK-IVASGDYKDTPD-P 122
Query: 515 SMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK 574
+ + + P I ++T+ P++ E I ++ ++ + P+ L+G+Y++GK
Sbjct: 123 TCAPFEVVPCDVFITESTFGLPVFRHANVEGEIAKLLASV---ALFPERAHLVGAYSLGK 179
Query: 575 ERLFLEVARV--LRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASF 632
+ + + R IY++ A ++ + + D+ + + TLA
Sbjct: 180 AQRVIAMIRAAGYTAPIYMHGAMEKITRYYEGRGIDLGELRLAKGVKKADLAGTITLAPP 239
Query: 633 KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPG 668
+ ++ + RF VA +GW + + + G
Sbjct: 240 SAI---TDIWTRRFPDPVAAFASGWMRVRARARQKG 272
>gi|357026453|ref|ZP_09088554.1| hypothetical protein MEA186_16902 [Mesorhizobium amorphae
CCNWGS0123]
gi|355541720|gb|EHH10895.1| hypothetical protein MEA186_16902 [Mesorhizobium amorphae
CCNWGS0123]
Length = 336
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 126/297 (42%), Gaps = 38/297 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH RS H + + T ++ ++ G + + +Q L + + G+ V
Sbjct: 33 LITHGHSDH----ARSGHR-SVLATQQTLDIMELRYGEGFAETVQTAALGKTMALNGVSV 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
T A H GS I E Q G ++ +GD++ ++ A+ + I + T+ P+
Sbjct: 88 TFHPAGHVLGSAQIAVERQ-GLRIVASGDYKRQKD-ATCEPFEPVRCDVFITEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR-----KKIYVN 592
+ P Q + +++ + P+ L+G+Y +GK + V R+LR + IY++
Sbjct: 146 FRHPPD---TQEIARLLKSAAQFPERSHLVGAYALGKAQ---RVMRLLRDAGYDRPIYIH 199
Query: 593 AAKFRV-----LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFS 647
A R+ + +D + D + + + + ++F ++++A RF
Sbjct: 200 GALTRLSEYYQSQGIDLGQLDPATVDSGGKDDFAGAIVVGPPSAF------ADRWARRFP 253
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
++ +GW + + K G + + S+H + EL VK E I
Sbjct: 254 DPISCFASGWMRIRQRAKQGG--------VELPLIISDHADWDELTATVKETGAEEI 302
>gi|188582672|ref|YP_001926117.1| mRNA 3-end processing factor [Methylobacterium populi BJ001]
gi|179346170|gb|ACB81582.1| putative mRNA 3-end processing factor [Methylobacterium populi
BJ001]
Length = 352
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDR-LQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T R++ ++ G + R Q L ++ I + V
Sbjct: 35 LITHGHADHARA-----GHGTVLATPETLRIMAVRYGEDFCRSRQEARLGERMRIGDVTV 89
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E + G+ ++ +GD++ + + + + P I + T+ P+
Sbjct: 90 FFAPAGHVLGSAQIAIE-REGQRIVVSGDYKRAPDPTCLP-FEVVPCDVFITEATFGLPV 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ P ++ +IE++ + P+ ++G+Y +GK + + + R
Sbjct: 148 FRHPDTRGEVRKLIESV---TLFPERAHIVGAYALGKAQRVMALLR 190
>gi|348501794|ref|XP_003438454.1| PREDICTED: protein bicaudal C homolog 1-B-like [Oreochromis
niloticus]
Length = 971
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 878 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 937
Query: 299 AVESNKDAHVSNDGSSSYHGSERHKEASKV 328
E + G+S + H E + V
Sbjct: 938 LFEPPIRSSFLEGGASGRLSRQFHAEMASV 967
>gi|431917669|gb|ELK16934.1| Protein artemis [Pteropus alecto]
Length = 774
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 123/288 (42%), Gaps = 47/288 (16%)
Query: 440 IYCSLITARLV--NMKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQN 497
+YCS +T L+ + K R+ + + T I +D E N N
Sbjct: 32 LYCSPVTKELLLTSPKYRFWEKRIISIEIETPTQIPLVDEASGEGN-------------N 78
Query: 498 GKAVLHTGDFRFSE-EMASMSVL----QTCPIHTLILDTTYCNP-LYDFPKQEAVIQFVI 551
G VL+TGDFR ++ E A M +L + I ++ LDTT+C+P Y P + + ++
Sbjct: 79 G-TVLYTGDFRLAKGETARMELLHYGGRVQDIQSVYLDTTFCDPKFYQIPSRAECLSGIL 137
Query: 552 EAIQAE-SFNP-KTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK-FRVLKCLDFSKED 608
E ++ S +P ++L G E LF ++ +++V+ FR + D
Sbjct: 138 ELVRGWISRSPYHVVWLNCKAAYGYEYLFTNLSEEFGLQVHVDKLDMFRNMP-------D 190
Query: 609 IQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL---IVAFSPTGWTFSKGKKK 665
I T + + IH + + + + + ++ P+ F + +K
Sbjct: 191 ILHHLTTDRSTQIHACRHPKAEEYFQWNKLPCGITSKNRIPLHTISIKPSTMWFGERTRK 250
Query: 666 SPGRRWQQGTIIR-----YEVPYSEHCSFTELKEFVKFVSPEHIIPSV 708
+ I+R Y +S H S++E+K+F+ ++ P ++ P+V
Sbjct: 251 T-------DVIVRTGESSYRACFSFHSSYSEIKDFLSYICPVNVYPNV 291
>gi|196010838|ref|XP_002115283.1| hypothetical protein TRIADDRAFT_59310 [Trichoplax adhaerens]
gi|190582054|gb|EDV22128.1| hypothetical protein TRIADDRAFT_59310 [Trichoplax adhaerens]
Length = 847
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
+ + LGL +Y F+++E+D T LT+ DL +G+T G R+K++ + +I+K+
Sbjct: 740 LTKLFKKLGLEKYVNVFLQQEVDLQTFSTLTDADLKELGITTFGARRKMVTAISDIRKQN 799
Query: 297 SR------AVESNKDAHVS---NDGSSSYHGS 319
+ A +S K+ S ND S+S GS
Sbjct: 800 QQKVSLELATDSGKNGTSSSYMNDVSASLAGS 831
>gi|402880795|ref|XP_003903977.1| PREDICTED: protein bicaudal C homolog 1, partial [Papio anubis]
Length = 861
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 767 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 826
Query: 299 AVES 302
ES
Sbjct: 827 LFES 830
>gi|344275037|ref|XP_003409320.1| PREDICTED: protein bicaudal C homolog 1 [Loxodonta africana]
Length = 894
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 800 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 859
Query: 299 AVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
E N A G+S + H + + V
Sbjct: 860 LFEPPNARASFLEGGASGRLPRQYHSDVASV 890
>gi|404318284|ref|ZP_10966217.1| putative mRNA 3-end processing factor [Ochrobactrum anthropi
CTS-325]
Length = 337
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 137/322 (42%), Gaps = 48/322 (14%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + +TH H DH + H + + T ++ ++ G
Sbjct: 16 CPPGD-FYIDPVR----PVERALITHGHSDHARA-----GHTHVLATPETLDIMALRYGA 65
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ + Q + L + TI G+ V+ A H GS I E ++G ++ +GD++ + + +
Sbjct: 66 NFAETTQPIGLGETLTINGVRVSFHGAGHVLGSAQIAVE-KDGTRIVASGDYKRAAD-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + I + T+ P++ P I ++++I+ P+ L+G+Y++GK
Sbjct: 124 CAPFEPVACDVFITEATFALPVFRHPDASHEIATLLKSIRQ---FPERAHLVGAYSLGKA 180
Query: 576 RLFLEVAR--VLRKKIYVNAA-----KFRVLKCLDFSKEDIQWFTTNEHE----SHIHVM 624
+ +++ R + IY++ A + + +D + +E + I V
Sbjct: 181 QRVIKLIRNAGYSEPIYIHGALEKMCDYYQAQGIDLGPLEPATLERDEAQPDFAGKIIVG 240
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY- 683
P S+++A RF ++ +GW + + K QQG E+P
Sbjct: 241 PP---------SAFSDRWARRFPDPISAFASGWMRIRQRAK------QQGV----ELPLI 281
Query: 684 -SEHCSFTELKEFVKFVSPEHI 704
S+HC + EL + ++P +
Sbjct: 282 ISDHCDWDELTATITEIAPAEV 303
>gi|355782914|gb|EHH64835.1| hypothetical protein EGM_18156, partial [Macaca fascicularis]
Length = 914
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 820 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 879
Query: 299 AVES 302
ES
Sbjct: 880 LFES 883
>gi|297686887|ref|XP_002820965.1| PREDICTED: LOW QUALITY PROTEIN: protein bicaudal C homolog 1 [Pongo
abelii]
Length = 894
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 800 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 859
Query: 299 AVES 302
ES
Sbjct: 860 LFES 863
>gi|355562587|gb|EHH19181.1| hypothetical protein EGK_19842, partial [Macaca mulatta]
Length = 910
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 816 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 875
Query: 299 AVES 302
ES
Sbjct: 876 LFES 879
>gi|255532455|ref|YP_003092827.1| mRNA 3-end processing factor [Pedobacter heparinus DSM 2366]
gi|255345439|gb|ACU04765.1| putative mRNA 3-end processing factor [Pedobacter heparinus DSM
2366]
Length = 332
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 129/297 (43%), Gaps = 45/297 (15%)
Query: 421 THFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTCL 480
TH H DH + + ++ C +T+ ++ ++G ++ LP ++ +I G+ ++
Sbjct: 32 THGHSDHVKWGSNAY-----LCHELTSPILKQRLGEL--NIETLPYGKEISINGVKISLF 84
Query: 481 EANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDF 540
A H GS + E + G+ + +GD++ +++ S + + +T + ++T+ P+Y +
Sbjct: 85 PAGHVIGSAQVRLEYK-GEVCVVSGDYKVTDDGIS-TAFEPVKCNTFVSESTFGLPIYKW 142
Query: 541 PKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVN------- 592
Q+ ++ + E I KT L+ +Y++GK +RL +A + +YV+
Sbjct: 143 QPQQLILDQIREWISGNQDKQKTSVLV-AYSLGKAQRLVAGLAGY--RPVYVHNSIANLN 199
Query: 593 ----AAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSL 648
A + + + + E + E + I ++P LA + +K +SN G S
Sbjct: 200 DAFKTAGVNLPETIRVTAET----SKEELQKGIVIVPP-ALAEGRWIKTLSNAATGVCS- 253
Query: 649 IVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHII 705
GW + GRRW+ S+H + L +K E +
Sbjct: 254 -------GWM-----QVRAGRRWRSADA---GFALSDHADWPGLLSAIKATEAEKVF 295
>gi|405355754|ref|ZP_11024866.1| mRNA 3-end processing factor [Chondromyces apiculatus DSM 436]
gi|397091026|gb|EJJ21853.1| mRNA 3-end processing factor [Myxococcus sp. (contaminant ex DSM
436)]
Length = 316
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 125/321 (38%), Gaps = 57/321 (17%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
GTP +DA + F++H H DH H + T R + ++G P
Sbjct: 5 GTPLSLDAKR----KSPLCFVSHGHSDHIA------RHESTIATAATLRFMAHRLG-PVR 53
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEM-ASMSV 518
+ +P N + + + L A H GS + +G+ +++TGD + + A +V
Sbjct: 54 EPREVPFNTPFELGALRLELLPAGHILGSAQLRVTRPDGRRIVYTGDLNVAPSLTAEATV 113
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLF 578
+ C TL++++T+ +P Y FP + V+ V ++ + L+G Y +GK +
Sbjct: 114 VAEC--DTLVIESTFGHPRYRFPPRAEVLGQVEAWLRMQLERGAVPVLLG-YPLGKSQEA 170
Query: 579 LEVARVLRKKIYVNAAKFRV-------------LKCLDFSKEDIQ-WFTTNEHESHIHVM 624
++ + +A+ F V L+C D E + F H +
Sbjct: 171 MKHLAGRGFSLVAHASIFEVAQLYAELGVPIENLRCYDGRVEPGEVLFFPPHHARGGALA 230
Query: 625 PMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYS 684
P+W R + ++ TGW +G RR+ G + + + S
Sbjct: 231 PLWP----------------RATAVL----TGWAVDRGAS----RRY--GADVAFAL--S 262
Query: 685 EHCSFTELKEFVKFVSPEHII 705
+H F L + K ++
Sbjct: 263 DHADFPGLVSYAKSTGAREVL 283
>gi|426364816|ref|XP_004049490.1| PREDICTED: protein bicaudal C homolog 1 [Gorilla gorilla gorilla]
gi|410336945|gb|JAA37419.1| bicaudal C homolog 1 [Pan troglodytes]
Length = 974
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVES 302
ES
Sbjct: 940 LFES 943
>gi|170582113|ref|XP_001895984.1| hypothetical protein [Brugia malayi]
gi|158596928|gb|EDP35189.1| conserved hypothetical protein [Brugia malayi]
Length = 432
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 227 SPQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKIL 286
+ +KA++V+ + E L L L +Y E F E ID + L++ DL+ IG+ A GPRKK+L
Sbjct: 246 TEKKAMEVNSLTELLSQLKLEKYIEIFETENIDLNLFLELSDADLMEIGIKAFGPRKKML 305
Query: 287 HTL 289
+ +
Sbjct: 306 NVI 308
>gi|149185292|ref|ZP_01863609.1| hypothetical protein ED21_19602 [Erythrobacter sp. SD-21]
gi|148831403|gb|EDL49837.1| hypothetical protein ED21_19602 [Erythrobacter sp. SD-21]
Length = 343
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 88/187 (47%), Gaps = 21/187 (11%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMK--IGIPWDRLQV----LPLNQKTTI 472
+TH H DH +G HG+ + T ++ ++ G D ++ +P+ TI
Sbjct: 34 LVTHGHADHARG-----GHGETVATPETLAIMELRYRTGAEDDAGEIPHRAVPVEYGETI 88
Query: 473 ---AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLIL 529
G+D T + A H GS IL E G+ V+ TGD++ + + + P I
Sbjct: 89 RLKGGVDATYIPAGHVLGSAQILLE-HAGERVIVTGDYKRRAD-PTCPPFEVTPCDIFIT 146
Query: 530 DTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRK 587
+ T+ P+++ P E + ++E ++A P L+G+Y +GK +R+ E+ A
Sbjct: 147 EATFGLPVFEHPPIEEEMAKLLERLRA---YPDRCVLVGAYALGKAQRVIAELRAAGHHD 203
Query: 588 KIYVNAA 594
IY++ A
Sbjct: 204 PIYLHGA 210
>gi|332834316|ref|XP_507803.3| PREDICTED: LOW QUALITY PROTEIN: protein bicaudal C homolog 1 [Pan
troglodytes]
Length = 974
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVES 302
ES
Sbjct: 940 LFES 943
>gi|109089742|ref|XP_001097455.1| PREDICTED: protein bicaudal C homolog 1 [Macaca mulatta]
Length = 974
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVES 302
ES
Sbjct: 940 LFES 943
>gi|397501093|ref|XP_003821232.1| PREDICTED: protein bicaudal C homolog 1 [Pan paniscus]
Length = 989
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 895 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 954
Query: 299 AVES 302
ES
Sbjct: 955 LFES 958
>gi|403273943|ref|XP_003928755.1| PREDICTED: protein bicaudal C homolog 1 [Saimiri boliviensis
boliviensis]
Length = 974
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVES 302
ES
Sbjct: 940 LFES 943
>gi|119574567|gb|EAW54182.1| hCG2024326, isoform CRA_g [Homo sapiens]
Length = 973
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 879 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 938
Query: 299 AVES 302
ES
Sbjct: 939 LFES 942
>gi|122937472|ref|NP_001073981.1| protein bicaudal C homolog 1 [Homo sapiens]
gi|119367815|sp|Q9H694.2|BICC1_HUMAN RecName: Full=Protein bicaudal C homolog 1; Short=Bic-C
gi|119574561|gb|EAW54176.1| hCG2024326, isoform CRA_a [Homo sapiens]
gi|162319328|gb|AAI56901.1| Bicaudal C homolog 1 (Drosophila) [synthetic construct]
Length = 974
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVES 302
ES
Sbjct: 940 LFES 943
>gi|395820685|ref|XP_003783692.1| PREDICTED: protein bicaudal C homolog 1 [Otolemur garnettii]
Length = 972
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 878 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 937
Query: 299 AVES 302
ES
Sbjct: 938 LFES 941
>gi|400760037|ref|YP_006589640.1| hypothetical protein PGA2_239p0510 [Phaeobacter gallaeciensis 2.10]
gi|398655509|gb|AFO89478.1| hypothetical protein PGA2_239p0510 [Phaeobacter gallaeciensis 2.10]
Length = 337
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 128/297 (43%), Gaps = 41/297 (13%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH + HG ++ S T ++ ++ G + ++ + + T + GI+
Sbjct: 37 MITHGHADHARA-----GHGTVWASPQTLDIMAIRYGEDFCATRIA-VEESTEVDGIEAR 90
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ H GS I + N A+ +GD+ + A S Q P + + T+ P++
Sbjct: 91 FTPSGHVLGSCQITVDDSN-TAITVSGDYARVDNPACAS-FQLAPCDVFVTEATFGLPVF 148
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARV--LRKKIYVNAA-- 594
P + I+ ++ ++ A+ P+ L+G+Y +GK + + + R + IY++ A
Sbjct: 149 SHPTPHSEIEKLLRSVAAQ---PERCHLVGAYALGKAQRVIALLRQAGWDQPIYIHGALQ 205
Query: 595 ---KFRVLKCLDFSKEDIQWFTTNEHES----HIHVMPMWTLASFKRLKHMSNQYAGRFS 647
+ + + +D +++ TT E ++ I + P A+ +A RF
Sbjct: 206 RLCDYHIAQGVDLG--ELRPATTKEGKAAFKGQIILGPPSAFAA---------TWAQRFP 254
Query: 648 LIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
V +GW + + + G + + S+H + +L ++ ++P+ +
Sbjct: 255 DPVICFASGWMQVRARARQRG--------VELPLILSDHVDWPDLTRTIRDLNPKQV 303
>gi|114705104|ref|ZP_01438012.1| hypothetical protein FP2506_09206 [Fulvimarina pelagi HTCC2506]
gi|114539889|gb|EAU43009.1| hypothetical protein FP2506_09206 [Fulvimarina pelagi HTCC2506]
Length = 336
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 41/318 (12%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D G +TH H DH + R+ + + T ++ ++ G
Sbjct: 16 CPPGD-FYIDPV----GKVDRALVTHGHADHARPGNRA-----VMATRETLDIMAIRYGE 65
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ + QV L + TTI + V+ A H GS I E G ++ +GD++ + +
Sbjct: 66 DFCETRQVAELGKTTTIGDVTVSFHPAGHVYGSAQIAVE-WKGMRIVASGDYKRRRD-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + I + T+ P++ P A ++ ++ +++ P+ ++G+Y +GK
Sbjct: 124 CAAFEPVKCDVFITEATFALPVFRHPDTAAEVEKLLVSMRR---FPERAHIVGAYALGKA 180
Query: 576 RLFLEVAR--VLRKKIYVNAAKFRVLKCLDFSKEDIQW-------FTTNEHESHIHVMPM 626
+ + R K IY++ A ++ C + E I+ T + + +
Sbjct: 181 QRVIRHVREAGYDKPIYIHGALKKL--CDFYQHEGIELGELRPATIETGKKGDFAGALIV 238
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
T ++F ++++A RF VA +GW + + + G + + S+H
Sbjct: 239 GTPSAF------ADKWARRFPDPVASFASGWMRVRQRARQRG--------VELPLILSDH 284
Query: 687 CSFTELKEFVKFVSPEHI 704
+ EL + +K V E +
Sbjct: 285 SDWDELTQTIKDVEAEEV 302
>gi|103485784|ref|YP_615345.1| putative mRNA 3-end processing factor [Sphingopyxis alaskensis
RB2256]
gi|98975861|gb|ABF52012.1| putative mRNA 3-end processing factor [Sphingopyxis alaskensis
RB2256]
Length = 337
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 78/165 (47%), Gaps = 13/165 (7%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI--PWDRLQVLPLNQKTTIAGIDV 477
+TH H DH RS HG ++ + T ++ ++ G+ + + G+
Sbjct: 35 VTHGHADH----ARS-GHGAVFATPETLAIMALRYGVDVAASHNRGFAYGEGFERGGVRF 89
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
+ A H GS IL E G+ ++ TGD++ + + + + P I + T+ P+
Sbjct: 90 SFHPAGHVLGSAQILME-YRGERIVVTGDYKRRAD-PTCAAFEVVPCDIFITEATFGLPV 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV 581
+ P + I +I+A++AE P L+G+Y +GK +RL E+
Sbjct: 148 FRHPPTQGEIAKLIDAVRAE---PDRCVLVGAYALGKAQRLIAEL 189
>gi|77462972|ref|YP_352476.1| hypothetical protein RSP_2414 [Rhodobacter sphaeroides 2.4.1]
gi|77387390|gb|ABA78575.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 383
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH RS HG + +A ++ ++G RL+ + + I G+ V+
Sbjct: 33 LITHGHSDH----ARS-GHGAYLATEGSAPVIRYRLGD--IRLKTIRYGETRRIGGVTVS 85
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H PGS I E ++G+ + +GD++ +E+ S + H+ I + T+ P++
Sbjct: 86 FHPAGHVPGSAQIRVE-RDGEVWVVSGDYKVAEDGLSEP-FEPVACHSFISECTFGLPVF 143
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ Q + + A + +T ++G+YT+GK + L A + I + A
Sbjct: 144 RWKPQAELAAQLNRWWAANAAEGRTS-IVGAYTLGKAQRLLVSADLSIGPILTHGA 198
>gi|404254732|ref|ZP_10958700.1| RNA procession exonuclease-like protein [Sphingomonas sp. PAMC
26621]
Length = 344
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 117/294 (39%), Gaps = 37/294 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T +++ + G + + + T
Sbjct: 46 LVTHGHADHARG-----GHGAVWATPETLAIMDARYGA--QAGHPVAYGESHDFGDVRAT 98
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS IL E G+ ++ +GD++ + + + + I + T+ P++
Sbjct: 99 FVPAGHVLGSAQILLE-YRGERIVVSGDYKRRPD-PTCTPFEPVKCDVFITEATFGLPVF 156
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P I +I A+ A NP L+G+Y +GK +R+ E+ R IY++ A
Sbjct: 157 RHPDTGDEIDKLIAALHA---NPDRCVLVGAYALGKAQRVIAELRVRGHAAPIYIHGALE 213
Query: 597 RVLKCLDFSKEDIQWF------TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
R+ D+ E H+ + P LA ++++ R +
Sbjct: 214 RLCALYQAHGVDLGELRPATTAAKAEMMGHVVIAPPGALA---------DRWSRRLPDPI 264
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+GW + + G + + S+H + EL E + ++P+ +
Sbjct: 265 TAMASGWMRVRQRAVQRG--------VELPLILSDHADWDELTETLTEIAPKEV 310
>gi|302652334|ref|XP_003018020.1| DNA repair protein [Trichophyton verrucosum HKI 0517]
gi|291181619|gb|EFE37375.1| DNA repair protein [Trichophyton verrucosum HKI 0517]
Length = 193
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 44/165 (26%)
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRF---------- 509
+++++P N I VT +ANHCPGS++ L E +GKA+L+TGD R
Sbjct: 32 KIELMPGNT------IKVTLFDANHCPGSVMFLVE-GDGKAILYTGDIRGKATITQSYKH 84
Query: 510 ---SEEMASMSVLQTCPIHTLI--------------LDTTYCNPLYD--------FPKQE 544
S + ++S+ ++ + +LI LDT Y + + FP +
Sbjct: 85 DSRSVFLLTISLAESWWVQSLIRNPVLIPYTMGDRRLDTIYFDTTFATKSDIHQVFPSKA 144
Query: 545 AVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKI 589
I+ ++ I+ + T+F + S+T G E ++L ++ L K+
Sbjct: 145 EGIRELLSKIKG--YPEDTIFYLRSWTFGYEDVWLALSAALGTKV 187
>gi|153011362|ref|YP_001372576.1| putative mRNA 3-end processing factor [Ochrobactrum anthropi ATCC
49188]
gi|151563250|gb|ABS16747.1| putative mRNA 3-end processing factor [Ochrobactrum anthropi ATCC
49188]
Length = 337
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 134/314 (42%), Gaps = 32/314 (10%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + +TH H DH RS H + + T ++ ++ G
Sbjct: 16 CPPGD-FYIDPVR----PVERALITHGHSDH----ARS-GHTHVLATPETLDIMALRYGA 65
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ + Q + L + TI G+ V A H GS I E ++G ++ +GD++ + + +
Sbjct: 66 NFAETTQPIGLGETLTINGVRVRFHGAGHVLGSAQIAVE-KDGTRIVASGDYKRAVD-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + I + T+ P++ P I ++++I+ P+ L+G+Y++GK
Sbjct: 124 CAPFEPVACDVFITEATFALPVFRHPDASHEIATLLKSIRQ---FPERAHLVGAYSLGKA 180
Query: 576 RLFLEVAR--VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASF- 632
+ +++ R K IY++ A ++ D+ E P +T
Sbjct: 181 QRVIKLIRNAGYSKPIYIHGALEKICDYYQAQGIDLGPLEPATVERD-EAQPDFTGKIIV 239
Query: 633 KRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY--SEHCSFT 690
S+++A RF ++ +GW + + K QQG E+P S+HC +
Sbjct: 240 GPPSAFSDRWARRFPDPISAFASGWMRIRQRAK------QQGV----ELPLIISDHCDWD 289
Query: 691 ELKEFVKFVSPEHI 704
EL + ++P +
Sbjct: 290 ELTATITEIAPAEV 303
>gi|312087002|ref|XP_003145298.1| hypothetical protein LOAG_09723 [Loa loa]
Length = 567
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 480 LEANHCPGSIIILFEPQNGKA---VLHTG----DFRFSEEMASMSVLQTCPIHTLILDTT 532
+ ANH PGS++++ E ++ +L+TG D RF + + ++S LQ + +D+
Sbjct: 45 VNANHAPGSVMLIIEGEHRTTLGRILYTGFFRADTRFYQNVIALSALQEKKFDVICIDSN 104
Query: 533 YCN-PLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYV 591
Y + ++P + + + ++ +N I IG E + ++R L+ KI++
Sbjct: 105 YVDFTREEYPNRRSSAKEAANLLRILKYNGVDNVAIPVPIIGCESFLVNISRELKCKIWL 164
Query: 592 NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMS--NQYAGRFSLI 649
+ +F + + L +F+ + +++I WT + + + +S + + R S+
Sbjct: 165 HPERFEIAQILGID----DYFSETKGDTYI-----WTCSQIESREVLSTTDSHIIRISMA 215
Query: 650 VAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVN 709
P G R + + YS+HCS EL+ F+ ++ I N
Sbjct: 216 PYVMP--------NISLNGER-------EHVIQYSDHCSSGELRSFLSLLTFSRITAISN 260
Query: 710 N 710
N
Sbjct: 261 N 261
>gi|221638828|ref|YP_002525090.1| mRNA 3-end processing factor [Rhodobacter sphaeroides KD131]
gi|221159609|gb|ACM00589.1| mRNA 3-end processing factor [Rhodobacter sphaeroides KD131]
Length = 383
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH RS HG + +A ++ ++G RL+ + + I G+ V+
Sbjct: 33 LITHGHSDH----ARS-GHGAYLATEGSAPVIRYRLGD--IRLKTIRYGETRRIGGVTVS 85
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H PGS I E ++G+ + +GD++ +E+ S + H+ I + T+ P++
Sbjct: 86 FHPAGHVPGSAQIRVE-RDGEVWVVSGDYKVAEDGLS-EPFEPVTCHSFISECTFGLPVF 143
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ Q + + A + +T ++G+YT+GK + L A + I + A
Sbjct: 144 RWKPQAELAAQLNRWWAANAAEGRTS-IVGAYTLGKAQRLLVSADLSIGPILTHGA 198
>gi|396082284|gb|AFN83894.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon romaleae SJ-2008]
Length = 643
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGL----TRSFHHGKIYCSLIT-- 446
P + V PF +D + D F+THFH+DH L ++ GK+Y + T
Sbjct: 40 PAYTGVASLPF-LDLVDLSKIDA--IFITHFHLDHAAALPFLTEKTSFKGKVYMTHPTKA 96
Query: 447 ---------ARLVNMKIGIP----------WDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
RL+N +DR+ + +Q+ + GI V L A H G
Sbjct: 97 ILKWLLNDYIRLINAASDADFYTESDLIKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLG 156
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT--CPIHTLILDTTY 533
+ + L E + K VL+TGDF EE + ++ C I LI ++TY
Sbjct: 157 AAMFLIEIEKSK-VLYTGDFS-REEDRHLKAAESPGCKIDGLITESTY 202
>gi|399578592|ref|ZP_10772339.1| metallo-beta-lactamase domain protein [Halogranum salarium B-1]
gi|399236478|gb|EJN57415.1| metallo-beta-lactamase domain protein [Halogranum salarium B-1]
Length = 561
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 59/119 (49%), Gaps = 23/119 (19%)
Query: 406 DAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHG-KIYCSLITARLVN--MKIGIP----- 457
DA +YL C LTH H+DHYQ L + HG IY + TAR++ ++ G
Sbjct: 49 DAGEYLTAIC----LTHAHLDHYQSLGANLDHGPPIYTGVDTARILEDVLETGREHHGLT 104
Query: 458 -----WDRLQVLPLNQKTTIA-GIDVTCLEANHCPGSIIILFEPQNG---KAVLHTGDF 507
DRL+ P+ IA G+ V + A H PG+I LFE + + +L TGDF
Sbjct: 105 RTEEVLDRLE--PVATWMQIAPGLRVHPVPAGHTPGAIGFLFEVTDNDVRRTILVTGDF 161
>gi|32471682|ref|NP_864675.1| cleavage and polyadenylation specifity factor protein
[Rhodopirellula baltica SH 1]
gi|32397053|emb|CAD72357.1| conserved hypothetical protein-putative cleavage and
polyadenylation specifity factor protein [Rhodopirellula
baltica SH 1]
Length = 385
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 420 LTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVTC 479
+TH H DH + R + + ++ RL N + L + TI GI V+
Sbjct: 36 ITHGHSDHARWGCRHYLSARPGEPILRMRLSNEA------EFEFLEYGEPRTIGGIQVSL 89
Query: 480 LEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYD 539
A H GS + E Q AV+ TGD++ + A+ + + HTL+ ++T+ P+Y
Sbjct: 90 HPAGHMLGSAQVRLEYQGEVAVV-TGDYKLQSD-ATCADFEPVRCHTLVTESTFGLPIYQ 147
Query: 540 FPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ + + + + + + K L G Y +GK + L IY + A
Sbjct: 148 WREDVEIFADINDWWRTSAAEGKCCLLYG-YAVGKSQRLLSGLDPSIGPIYTHGA 201
>gi|410900636|ref|XP_003963802.1| PREDICTED: protein bicaudal C homolog 1-B-like [Takifugu rubripes]
Length = 942
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E +LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 849 ELFSNLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 908
Query: 299 AVESNKDAHVSNDGSSSYHGSERHKEASKV 328
E + G+S + H + + +
Sbjct: 909 LFEPPIRSSFLEGGASGRLSRQFHTDVASI 938
>gi|335423668|ref|ZP_08552689.1| hypothetical protein SSPSH_13282 [Salinisphaera shabanensis E1L3A]
gi|335423840|ref|ZP_08552858.1| hypothetical protein SSPSH_14159 [Salinisphaera shabanensis E1L3A]
gi|334890591|gb|EGM28853.1| hypothetical protein SSPSH_14159 [Salinisphaera shabanensis E1L3A]
gi|334891493|gb|EGM29741.1| hypothetical protein SSPSH_13282 [Salinisphaera shabanensis E1L3A]
Length = 335
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 84/179 (46%), Gaps = 14/179 (7%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPL--NQKTTIAGID 476
+TH H DH + H + + +A ++ ++G +++ P+ +K T
Sbjct: 31 LITHAHADHARN-----GHDHYWATAQSAPILYKRLG---RNIELTPIEYGEKLTFGAAQ 82
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNP 536
V+ A H GS I E +G+ + +GD++ + + + + P T I + T+ P
Sbjct: 83 VSFHPAGHVLGSAQIRVE-VDGEVWVASGDYKRDAD-PTCADFEVVPCDTFITEATFALP 140
Query: 537 LYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARVLRKKIYVNAA 594
+Y + V + QA + KT L SY++GK +RL E+AR+ + +Y++ A
Sbjct: 141 VYRWADTATVAADIRAWWQANAAAGKTSVLF-SYSLGKAQRLLAELARLTDETVYLHGA 198
>gi|313229454|emb|CBY18268.1| unnamed protein product [Oikopleura dioica]
Length = 246
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
+ E L S+GLA+YE F+ ++ID+ L+E DL IG+ GPR+K+ + + I++
Sbjct: 83 IKEILDSIGLAKYEAVFIEQDIDFQVFLTLSETDLKEIGINLFGPRRKLANCIARIQE 140
>gi|395501478|ref|XP_003755121.1| PREDICTED: protein bicaudal C homolog 1 [Sarcophilus harrisii]
Length = 973
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 879 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 938
Query: 299 AVESNKDAHVSNDGSSS 315
E S +G +S
Sbjct: 939 LFEPPNTRASSLEGGAS 955
>gi|240139984|ref|YP_002964461.1| hypothetical protein MexAM1_META1p3447 [Methylobacterium extorquens
AM1]
gi|418061668|ref|ZP_12699513.1| beta-lactamase domain protein [Methylobacterium extorquens DSM
13060]
gi|240009958|gb|ACS41184.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
gi|373564787|gb|EHP90871.1| beta-lactamase domain protein [Methylobacterium extorquens DSM
13060]
Length = 352
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T R++ ++ G + Q L ++ I + V
Sbjct: 35 LITHGHADHARA-----GHGTVLATPETLRIMAVRYGEDFCTTRQEARLGERMRIGDVTV 89
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E ++GK ++ +GD++ + + + + P I + T+ P+
Sbjct: 90 FFAPAGHVLGSAQIAIE-RDGKRIVVSGDYKRAPDPTCLP-FEVVPCDVFITEATFGLPV 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ P ++ +I+++ + P+ ++G+Y +GK + + + R
Sbjct: 148 FRHPDTRGEVRKLIDSV---TLFPERAHIVGAYALGKAQRVMALLR 190
>gi|357629843|gb|EHJ78372.1| hypothetical protein KGM_05993 [Danaus plexippus]
Length = 784
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%)
Query: 228 PQKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILH 287
P K + + L +GL +Y + F + E+D T L E DL IG+TA G R+K+L
Sbjct: 690 PTKQCRYQQLYDLLRDIGLHKYIDLFKKHELDMSTFASLNEADLTEIGITAFGARRKMLL 749
Query: 288 TLCEIKKEYS 297
+ E++K+ S
Sbjct: 750 VIAELQKQTS 759
>gi|303391080|ref|XP_003073770.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon intestinalis ATCC 50506]
gi|303302918|gb|ADM12410.1| putative beta-lactamase fold-containing exonuclease
[Encephalitozoon intestinalis ATCC 50506]
Length = 696
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 32/168 (19%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGL----TRSFHHGKIYCSLIT-- 446
P + V PF +D + D F+THFH+DH L ++ GK+Y + T
Sbjct: 40 PAYTGVASLPF-LDLVDLSKIDA--IFVTHFHLDHAAALPFLTEKTSFKGKVYMTHPTKA 96
Query: 447 ---------ARLVNMKIGIP----------WDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
RL+N +DR+ + +Q+ + GI V L A H G
Sbjct: 97 ILKWLLNDYIRLINAASDADFYTETDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLG 156
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT--CPIHTLILDTTY 533
+ + L E + K +L+TGDF EE + ++ C I LI ++TY
Sbjct: 157 AAMFLVEIEKSK-ILYTGDFS-REEDRHLKAAESPGCKIDALITESTY 202
>gi|429206626|ref|ZP_19197891.1| mRNA 3-end processing factor [Rhodobacter sp. AKP1]
gi|428190386|gb|EKX58933.1| mRNA 3-end processing factor [Rhodobacter sp. AKP1]
Length = 355
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH RS HG + +A ++ ++G RL+ + + I G+ V+
Sbjct: 5 LITHGHSDH----ARS-GHGAYLATEGSAPVIRYRLGD--IRLKTIRYGETRRIGGVTVS 57
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H PGS I E ++G+ + +GD++ +E+ S + H+ I + T+ P++
Sbjct: 58 FHPAGHVPGSAQIRVE-RDGEVWVVSGDYKVAEDGLS-EPFEPVTCHSFISECTFGLPVF 115
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
+ Q + + A + +T ++G+YT+GK + L
Sbjct: 116 HWKPQAELAAQLNRWWAANAAEGRT-SIVGAYTLGKAQRLL 155
>gi|401827745|ref|XP_003888165.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
gi|392999365|gb|AFM99184.1| putative RNA-processing beta-lactamase-fold exonuclease
[Encephalitozoon hellem ATCC 50504]
Length = 643
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGL----TRSFHHGKIYCSLIT-- 446
P + V PF +D + D F+THFH+DH L ++ GK+Y + T
Sbjct: 40 PAYTGVASLPF-LDLVDLSKIDA--IFITHFHLDHAAALPFLTEKTSFKGKVYMTHPTKA 96
Query: 447 ---------ARLVNMK----------IGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
RL+N + +DR+ + +Q+ + GI V L A H G
Sbjct: 97 ILKWLLNDYIRLINAASDADFYTETDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLG 156
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT--CPIHTLILDTTY 533
+ + L E + K VL+TGDF EE + ++ C I LI ++TY
Sbjct: 157 AAMFLIEIEKSK-VLYTGDFS-REEDRHLKAAESPGCKIDALITESTY 202
>gi|322711311|gb|EFZ02885.1| protein kinase regulator Ste50 [Metarhizium anisopliae ARSEF 23]
Length = 744
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 238 VEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYS 297
+F+ ++GL +Y +AFV EI + L L EDL +G+ ++G R IL ++ ++KK
Sbjct: 329 ADFISTIGLPQYADAFVENEIVGEALVALQHEDLKSMGIASVGHRLTILKSVYDVKKAQD 388
Query: 298 RAVESNKDAHVSNDGSSSY 316
+ES+ +S D + Y
Sbjct: 389 VPIESDHYFPLSADAEAQY 407
>gi|189529793|ref|XP_700087.3| PREDICTED: protein bicaudal C homolog 1-B, partial [Danio rerio]
Length = 772
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 678 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 737
Query: 299 AVE 301
E
Sbjct: 738 LFE 740
>gi|408404164|ref|YP_006862147.1| beta-lactamase [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364760|gb|AFU58490.1| beta-lactamase domain protein [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 700
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 38/216 (17%)
Query: 404 RVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHG---KIYCSLITARLVNM------KI 454
R+D F + D + H H+DH L F +G +YC+ T L+ + KI
Sbjct: 290 RLDWFNFDLDDLDAVIIGHAHIDHQGFLPALFKYGYKGPVYCTEPTLPLMTLLQMDSVKI 349
Query: 455 G------IPWDRLQV---------LPLNQKTTIA-GIDVTCLEANHCPGSIIILFEPQNG 498
+P++ V LP + T I+ I +T A H GS +
Sbjct: 350 ANSNGTYLPYEARDVNEVIKHCITLPYGKPTDISPDITITLQNAGHIMGSATVHLNISGA 409
Query: 499 KAVLHTGDFRFSEEMASMSVLQTCP-IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAE 557
+L++GD++++ S + P + TLI ++TY N P Q+ V + E+I
Sbjct: 410 HNILYSGDYKYARTQLLDSAVSMYPRVETLITESTYGNTTDVMPDQQVVYRSFTESIN-- 467
Query: 558 SFNPKTLF-----LIGSYTIGK-ERLFLEVARVLRK 587
KTL LI +G+ + + L +A+ +R+
Sbjct: 468 ----KTLIEGGKVLIPVPAVGRAQEIMLVMAKEMRE 499
>gi|399037747|ref|ZP_10734392.1| putative exonuclease, DNA ligase-associated [Rhizobium sp. CF122]
gi|398064620|gb|EJL56299.1| putative exonuclease, DNA ligase-associated [Rhizobium sp. CF122]
Length = 336
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 127/302 (42%), Gaps = 48/302 (15%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + H + + T ++ ++ G + Q + ++ I G+ V
Sbjct: 33 LITHGHSDHARP-----GHTNVLATRQTLDIMQIRYGEGFCTSEQAVAFGEEILINGVRV 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
+ A H GS I E +NG ++ +GD++ + + + P I + T+ P+
Sbjct: 88 SFHPAGHVLGSAQIAIE-KNGTRIVVSGDYKRRAD-PTCAAYVPVPCDVFITEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR-----KKIYVN 592
+ P + + +++ P+ LIG+Y +GK + V R+LR + IY++
Sbjct: 146 FHHPDPVDEMGKLYASLRQ---FPERTHLIGAYALGKAQ---RVIRLLRDTGYDQPIYIH 199
Query: 593 AAKFRV--------LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG 644
A R+ ++ + I+ + + I V P A +++A
Sbjct: 200 GAMERLCDYYVSQGIELGELRPATIESSDKSAFKGAIVVGPSSAFA---------DRWAR 250
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY--SEHCSFTELKEFVKFVSPE 702
RF+ + +GW + + K QQG E+P S+HC + EL E + + PE
Sbjct: 251 RFNEPLPAFASGWMMVRQRAK------QQGV----ELPLVISDHCDWPELTETISDLRPE 300
Query: 703 HI 704
+
Sbjct: 301 EV 302
>gi|195637532|gb|ACG38234.1| SAM domain family protein [Zea mays]
Length = 212
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTL 289
SP+ FL SLGL +Y F EE+D L+ +TE DL +G+ +GPRKKI+ L
Sbjct: 155 SPLGSFLSSLGLEKYSITFQAEEVDMAALRHMTESDLKALGI-PMGPRKKIILAL 208
>gi|281353928|gb|EFB29512.1| hypothetical protein PANDA_017360 [Ailuropoda melanoleuca]
Length = 872
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 778 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 837
Query: 299 AVE 301
E
Sbjct: 838 LFE 840
>gi|449504860|ref|XP_002188483.2| PREDICTED: protein bicaudal C homolog 1 [Taeniopygia guttata]
Length = 990
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 896 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 955
Query: 299 AVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ SN A G+S + H + + V
Sbjct: 956 LFDPSNIRASFLEGGASGRLPRQYHSDIASV 986
>gi|348514317|ref|XP_003444687.1| PREDICTED: protein bicaudal C homolog 1-like [Oreochromis
niloticus]
Length = 880
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
+ E L LGL +Y + F ++EID+ T L++EDL +GV+ G R+K+L + E+ K
Sbjct: 784 LAELLGQLGLLKYIDVFEQQEIDYQTFLTLSDEDLKEVGVSTFGARRKMLLAISELNKSK 843
Query: 297 SR 298
R
Sbjct: 844 RR 845
>gi|444726687|gb|ELW67209.1| Protein bicaudal C like protein 1 [Tupaia chinensis]
Length = 888
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 794 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 853
Query: 299 AVE 301
E
Sbjct: 854 LFE 856
>gi|313760543|ref|NP_001186436.1| protein bicaudal C homolog 1 [Gallus gallus]
Length = 978
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 884 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 943
Query: 299 AVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ SN A G+S + H + + V
Sbjct: 944 LFDPSNIRASFLEGGASGRLPRQYHSDIASV 974
>gi|402848609|ref|ZP_10896864.1| mRNA 3-end processing factor [Rhodovulum sp. PH10]
gi|402501120|gb|EJW12777.1| mRNA 3-end processing factor [Rhodovulum sp. PH10]
Length = 354
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/307 (19%), Positives = 123/307 (40%), Gaps = 29/307 (9%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNM 452
P C P F VD + + +TH H DH + HG + + T L+ +
Sbjct: 11 PAGLCCPSGNFFVDPRRAVETA----LITHAHSDHARP-----GHGAVLATRETLDLMRL 61
Query: 453 KIGIPW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
+ G + R Q + + TI + V + H G+ IL E + G ++ +GD++
Sbjct: 62 RYGENFAGRTQAVAYGETLTIGDVRVCFFPSGHVLGAAQILVE-KAGLRIVASGDYKDVP 120
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ + + + H I + T+ P++ A +Q + + +++ P+ L+G+YT
Sbjct: 121 D-PTCTPFEPVRCHVFITEATFGLPVFRHGDAAAEVQ---KLVHSQNLFPERTHLVGAYT 176
Query: 572 IGKERLFLEVARVLR--KKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTL 629
+GK + + + R I+++ A + K D+ + ++ L
Sbjct: 177 LGKAQRLIAMLRAAGHDAPIFLHGA-MEAITGYYAGKMDLGDLRPVRDATKADLVGAIVL 235
Query: 630 ASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSF 689
L +++ RFS +A +GW + + + G I + S+HC +
Sbjct: 236 CPPSAL---GDRWTRRFSDPIACFASGWMRIRARARQRG--------IELPLVISDHCDW 284
Query: 690 TELKEFV 696
L +
Sbjct: 285 DGLLRVI 291
>gi|335301661|ref|XP_001929158.2| PREDICTED: protein bicaudal C homolog 1 [Sus scrofa]
Length = 894
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 800 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 859
Query: 299 AVE 301
E
Sbjct: 860 LFE 862
>gi|297526338|ref|YP_003668362.1| hypothetical protein Shell_0331 [Staphylothermus hellenicus DSM
12710]
gi|297255254|gb|ADI31463.1| conserved hypothetical protein [Staphylothermus hellenicus DSM
12710]
Length = 357
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 143/366 (39%), Gaps = 55/366 (15%)
Query: 380 AKDQSKGRKHKDI--PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHH 437
+K S+ K+ DI T V G F +D F + ++H H DH GL S +
Sbjct: 4 SKSISELLKYVDILGDTSAIVVGESFAIDGF----AEKPVRVISHAHYDHIVGLKDSILY 59
Query: 438 GKIYCSLITARLVNMKIGIPWDR-LQVLPLN--------QKTTIAGIDVTCLEANHCPGS 488
K + + + +G R L++L N ++ T G + + ++H GS
Sbjct: 60 SKQIVATPPTHDLILTLGYVGGRELRMLYKNKMVRLNYYEEYTYGGEKLVLIPSHHIIGS 119
Query: 489 IIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQ 548
+L E + + + +TGDF+ E M L LI+++TY +P Y P + V
Sbjct: 120 AQVLIEIGDLR-IGYTGDFKLGENTKIMDGLD-----ILIIESTYGDPSYRRPFKNEVED 173
Query: 549 FVIEAI--QAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAK---------FR 597
+++ + E + +F G E ++LR+ N K +
Sbjct: 174 LLVDIVLDGLEMYGKVVIF-------GYHGKIQEAMQILRR----NGVKEPFLMPKRIYE 222
Query: 598 VLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGW 657
V + + +I + ++ F+ +++ G +L + S GW
Sbjct: 223 VTRIAEKYGYEIGGYYNMRSLKGREILKSNRYILFEHFNKANHRRLGNNTLYIVLS--GW 280
Query: 658 TFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHIIPSVNNDGRDSAN 717
F+ KK W V S+H F EL E+V+ P +I V+ + SA
Sbjct: 281 EFNGPIKKIDRYTWL--------VALSDHADFDELIEYVEKAEPRLVI--VDGSRQGSAE 330
Query: 718 AMVSLL 723
A+ + L
Sbjct: 331 ALANEL 336
>gi|194292335|ref|YP_002008242.1| hypothetical protein RALTA_B1593 [Cupriavidus taiwanensis LMG
19424]
gi|193226239|emb|CAQ72188.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
Length = 373
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 25/188 (13%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS-----LITARLVN 451
C PG F +D ++ +TH H DH + F H C+ ++ ARL
Sbjct: 32 CPPGD-FYIDPWR----PVERAVITHAHSDHAR-----FGHAHYLCAAPGRGVLLARLPG 81
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
++ L L ++ T G+ ++ A H GS + E G+ + +GD++ E
Sbjct: 82 IQ-------LDTLRYGERITHHGVTLSLHPAGHVLGSAQVRLE-HGGQVWVASGDYKL-E 132
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ + P T I ++T+ P+Y +P Q ++ + + QA S + ++ +YT
Sbjct: 133 ADGTCDPFEPVPCDTFITESTFGLPIYRWPPQATLMAEIFDWWQANSRVGRA-SIVYAYT 191
Query: 572 IGKERLFL 579
GK + L
Sbjct: 192 FGKAQRIL 199
>gi|126272663|ref|XP_001363852.1| PREDICTED: protein bicaudal C homolog 1 [Monodelphis domestica]
Length = 973
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 879 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 938
Query: 299 AVESNKDAHVSNDGSSS 315
E S +G +S
Sbjct: 939 LFEPPNARTSSLEGGAS 955
>gi|433771491|ref|YP_007301958.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Mesorhizobium australicum WSM2073]
gi|433663506|gb|AGB42582.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Mesorhizobium australicum WSM2073]
Length = 336
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 123/293 (41%), Gaps = 44/293 (15%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH RS HG + + T ++ ++ G + Q L + + G+DV
Sbjct: 33 LITHGHSDH----ARS-GHGSVLATQQTLDIMGLRYGEDFAGTTQTARLGETIALNGVDV 87
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
+ A H GS I E Q G+ ++ +GD++ ++ A+ + + I + T+ P+
Sbjct: 88 SFHPAGHVLGSAQISVEHQ-GRRIVASGDYKRQKD-ATCAPFEPIRCDIFITEATFGLPV 145
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR-----KKIYVN 592
+ P I ++++ A F P+ L+G+Y +GK + V R+LR K +Y++
Sbjct: 146 FRHPPDTEEIARLLKS--AAQF-PERSHLVGAYALGKAQ---RVMRLLRDAGYDKPLYIH 199
Query: 593 AAKFRV--------LKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG 644
A ++ + D ++ + I V P A +++A
Sbjct: 200 GALAKLSAYYQSQGIDLGDLEPATVESGAKQDFAGAIVVGPPSAFA---------DRWAR 250
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVK 697
RF ++ +GW + + K G + + S+H + EL +K
Sbjct: 251 RFPDPISCFASGWMRIRQRAKQGG--------VELPLIISDHADWDELTATIK 295
>gi|301784332|ref|XP_002927581.1| PREDICTED: protein bicaudal C homolog 1-like [Ailuropoda
melanoleuca]
Length = 905
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 811 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 870
Query: 299 AVE 301
E
Sbjct: 871 LFE 873
>gi|149690261|ref|XP_001502118.1| PREDICTED: protein bicaudal C homolog 1 [Equus caballus]
Length = 913
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 819 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 878
Query: 299 AVE 301
E
Sbjct: 879 LFE 881
>gi|348575646|ref|XP_003473599.1| PREDICTED: protein bicaudal C homolog 1-like [Cavia porcellus]
Length = 894
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 800 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 859
Query: 299 AVE 301
E
Sbjct: 860 LFE 862
>gi|440903475|gb|ELR54128.1| Protein bicaudal C-like protein 1, partial [Bos grunniens mutus]
Length = 912
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 818 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 877
Query: 299 AVE 301
E
Sbjct: 878 LFE 880
>gi|89273991|emb|CAJ81753.1| bicaudal C homolog 1 (Drosophila) [Xenopus (Silurana) tropicalis]
Length = 745
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 651 ELFSKLGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 710
Query: 299 AVE 301
E
Sbjct: 711 LFE 713
>gi|345798974|ref|XP_850799.2| PREDICTED: LOW QUALITY PROTEIN: protein bicaudal C homolog 1 [Canis
lupus familiaris]
Length = 974
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVE 301
E
Sbjct: 940 LFE 942
>gi|324509289|gb|ADY43911.1| 5' exonuclease Apollo [Ascaris suum]
Length = 420
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 474 GIDVTCLEANHCPGSIIILFEPQNGK--AVLHTGDFR----FSEEMASMSVLQTCPIHTL 527
G VT L ANH G+++ LFE K +VL TGDFR F + +++ +LQ +
Sbjct: 3 GFWVTPLNANHIRGAVMYLFEGPAIKEGSVLCTGDFRADTHFYVQPSTILLLQEHIFGMI 62
Query: 528 ILDTTYCNPL-YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLR 586
+D TY L +FP +E ++ ++ I++ N ++L+ + +G+E+ L+++ L+
Sbjct: 63 HVDNTYSESLEKEFPSREESLEEAVKVIRSLP-NDANIYLVMN-RVGREQFLLDLSERLQ 120
Query: 587 KKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRF 646
++I ++ + + + S F + E+ I + L N Y
Sbjct: 121 ERIALHKWRQAIADAWELSDH----FAKPDEETRIRTCRR---EETRALLQNENAYVIEV 173
Query: 647 SLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFV 699
+++ + + + YS+HCS EL++F+ +
Sbjct: 174 TMLASLKADVSVIHDRVRT---------------IDYSDHCSPNELRDFLSLL 211
>gi|194679417|ref|XP_617983.4| PREDICTED: protein bicaudal C homolog 1 [Bos taurus]
gi|297491437|ref|XP_002698871.1| PREDICTED: protein bicaudal C homolog 1 [Bos taurus]
gi|296472213|tpg|DAA14328.1| TPA: bicaudal C homolog 1-like [Bos taurus]
Length = 892
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 798 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 857
Query: 299 AVE 301
E
Sbjct: 858 LFE 860
>gi|351707160|gb|EHB10079.1| bicaudal C-like protein 1, partial [Heterocephalus glaber]
Length = 913
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 819 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 878
Query: 299 AVE 301
E
Sbjct: 879 LFE 881
>gi|157818393|ref|NP_001102001.1| protein bicaudal C homolog 1 [Rattus norvegicus]
gi|149043813|gb|EDL97264.1| bicaudal C homolog 1 (Drosophila) (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 898
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 801 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSKNRRK 860
Query: 299 AVE 301
E
Sbjct: 861 LFE 863
>gi|338532828|ref|YP_004666162.1| hypothetical protein LILAB_15905 [Myxococcus fulvus HW-1]
gi|337258924|gb|AEI65084.1| hypothetical protein LILAB_15905 [Myxococcus fulvus HW-1]
Length = 328
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 15/199 (7%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
CVPG F +D ++ +TH H DH +G +R + + L+ RL
Sbjct: 10 CVPGD-FHIDPWR----PVDRALITHAHGDHARGGSRRYLGARAGKGLLHRRLGADAT-- 62
Query: 457 PWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASM 516
+ L ++ I G+ V+ A H GS + E G+ + +GD++ + + +
Sbjct: 63 ----IDTLDYGERLDINGVTVSFHPAGHVLGSAQLRVE-HGGETWVVSGDYKRAPD-PTC 116
Query: 517 SVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-E 575
+ + P T I + T+ P++ + V + ++ A + L Y +GK +
Sbjct: 117 APFEVVPCDTFITEATFGLPIFRWDAAAQVAEDILRWWDANRALGRAAVLF-CYALGKAQ 175
Query: 576 RLFLEVARVLRKKIYVNAA 594
RL E+A++ + ++V+ A
Sbjct: 176 RLLAELAKLTDRAVFVHGA 194
>gi|414587645|tpg|DAA38216.1| TPA: hypothetical protein ZEAMMB73_926325 [Zea mays]
Length = 114
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTL 289
SP+ FL SLGL +Y F EE+D L+ +T+ DL +G+ +GPRKKI+ L
Sbjct: 57 SPLDSFLSSLGLEKYSITFQAEEVDMAALRHMTDSDLKALGIP-MGPRKKIILAL 110
>gi|345305872|ref|XP_003428391.1| PREDICTED: protein bicaudal C homolog 1-like [Ornithorhynchus
anatinus]
Length = 1128
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 1034 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNGRK 1093
Query: 299 AVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ N A G+S + H + + V
Sbjct: 1094 LFDPPNARASFLEGGASGRLPRQYHADIASV 1124
>gi|410975167|ref|XP_003994006.1| PREDICTED: protein bicaudal C homolog 1 [Felis catus]
Length = 910
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 816 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 875
Query: 299 AVE 301
E
Sbjct: 876 LFE 878
>gi|218531492|ref|YP_002422308.1| mRNA 3-end processing factor [Methylobacterium extorquens CM4]
gi|218523795|gb|ACK84380.1| putative mRNA 3-end processing factor [Methylobacterium extorquens
CM4]
Length = 352
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T R++ ++ G + Q L ++ I + V
Sbjct: 35 LITHGHADHARA-----GHGTVLATPETLRIMAVRYGEDFCTSRQEARLAERMRIGDVTV 89
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E ++GK ++ +GD++ + + + + P I + T+ P+
Sbjct: 90 FFAPAGHVLGSAQIAIE-RDGKRIVVSGDYKRAPDPTCLP-FEVVPCDVFITEATFGLPV 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ P ++ +I+++ + P+ ++G+Y +GK + + + R
Sbjct: 148 FRHPDTRGEVRKLIDSV---TLFPERAHIVGAYALGKAQRVMALLR 190
>gi|332557847|ref|ZP_08412169.1| hypothetical protein RSWS8N_02310 [Rhodobacter sphaeroides WS8N]
gi|332275559|gb|EGJ20874.1| hypothetical protein RSWS8N_02310 [Rhodobacter sphaeroides WS8N]
Length = 383
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH + HG + +A ++ ++G RL+ + + I G+ V+
Sbjct: 33 LITHGHSDHARP-----GHGAYLATEGSAPVIRYRLGD--IRLKTIRYGETRRIGGVTVS 85
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
A H PGS I E ++G+ + +GD++ +E+ S + H+ I + T+ P++
Sbjct: 86 FHPAGHVPGSAQIRVE-RDGEVWVVSGDYKVAEDGLS-EPFEPVTCHSFISECTFGLPVF 143
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAA 594
+ Q + + A + +T ++G+YT+GK + L A + I + A
Sbjct: 144 RWKPQAELAAQLNRWWAANAAEGRTS-IVGAYTLGKAQRLLVSADLSIGPILTHGA 198
>gi|354474043|ref|XP_003499241.1| PREDICTED: protein bicaudal C homolog 1 [Cricetulus griseus]
Length = 893
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 799 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSKNRRK 858
Query: 299 AVE 301
E
Sbjct: 859 LFE 861
>gi|148235415|ref|NP_001088559.1| protein bicaudal C homolog 1-B [Xenopus laevis]
gi|82180046|sp|Q5U4T7.1|BIC1B_XENLA RecName: Full=Protein bicaudal C homolog 1-B; Short=Bic-C-B
gi|54648555|gb|AAH84957.1| LOC495436 protein [Xenopus laevis]
Length = 970
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K
Sbjct: 872 SDLPELFSKLGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 931
Query: 295 EYSRAVE 301
+ E
Sbjct: 932 NRRKLFE 938
>gi|38566112|gb|AAH62174.1| Bicc1 protein, partial [Mus musculus]
Length = 606
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 511 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSKNRRK 570
Query: 299 AVE 301
E
Sbjct: 571 LFE 573
>gi|344236151|gb|EGV92254.1| Protein bicaudal C-like 1 [Cricetulus griseus]
Length = 895
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 801 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSKNRRK 860
Query: 299 AVE 301
E
Sbjct: 861 LFE 863
>gi|426255590|ref|XP_004021431.1| PREDICTED: protein bicaudal C homolog 1 [Ovis aries]
Length = 972
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 878 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 937
Query: 299 AVE 301
E
Sbjct: 938 LFE 940
>gi|312080039|ref|XP_003142431.1| hypothetical protein LOAG_06847 [Loa loa]
gi|307762407|gb|EFO21641.1| hypothetical protein LOAG_06847 [Loa loa]
Length = 432
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 229 QKAVDVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHT 288
+KA++V+ + E L L L +Y E F E ID + L + DL+ IG+ A GPRKK+L+
Sbjct: 248 KKAMEVNSLTELLTRLKLEKYIEIFETENIDLNLFLELNDTDLMEIGIKAFGPRKKMLNV 307
Query: 289 L 289
+
Sbjct: 308 I 308
>gi|429770056|ref|ZP_19302139.1| hypothetical protein HMPREF0185_02429 [Brevundimonas diminuta
470-4]
gi|429185824|gb|EKY26797.1| hypothetical protein HMPREF0185_02429 [Brevundimonas diminuta
470-4]
Length = 296
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/250 (19%), Positives = 106/250 (42%), Gaps = 24/250 (9%)
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
R Q + T+I G++V + A H GS + + G + +GD++ + + +
Sbjct: 22 RTQAAGYGETTSIGGVEVRLIPAGHVLGSAQAVVS-RGGLIMTVSGDYKRRRD-PTCAPF 79
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFL 579
+ P H I + T+ P++ P IQ ++ ++ + P+ L+G+Y +GK +
Sbjct: 80 EAAPCHVFISEATFGLPVFVHPPDTEEIQRLVSSL---AQFPERAHLVGAYALGKAQ--- 133
Query: 580 EVARVLR-----KKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKR 634
+ R+LR + IYV+ A R+ S + + + + +
Sbjct: 134 RIIRLLREAGWERTIYVHGALERLNDLYQASGVPLGPLSPA---TGLKAGALGGEVVIAP 190
Query: 635 LKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKE 694
+ +++A RF+ +A +GW + + + G + + S+H + EL
Sbjct: 191 PSAIQDRWARRFAEPIAAFASGWMGVRARARQRG--------VELPLVISDHADWPELTR 242
Query: 695 FVKFVSPEHI 704
+ ++PE +
Sbjct: 243 TFEEIAPEEV 252
>gi|432904514|ref|XP_004077369.1| PREDICTED: protein bicaudal C homolog 1-B-like [Oryzias latipes]
Length = 966
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 873 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 932
Query: 299 AVE 301
E
Sbjct: 933 LFE 935
>gi|332218308|ref|XP_003258298.1| PREDICTED: protein bicaudal C homolog 1 [Nomascus leucogenys]
Length = 974
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVE 301
E
Sbjct: 940 LFE 942
>gi|291404339|ref|XP_002718527.1| PREDICTED: bicaudal C homolog 1 [Oryctolagus cuniculus]
Length = 974
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 880 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 939
Query: 299 AVE 301
E
Sbjct: 940 LFE 942
>gi|163852651|ref|YP_001640694.1| putative mRNA 3-end processing factor [Methylobacterium extorquens
PA1]
gi|254562410|ref|YP_003069505.1| hypothetical protein METDI4025 [Methylobacterium extorquens DM4]
gi|163664256|gb|ABY31623.1| putative mRNA 3-end processing factor [Methylobacterium extorquens
PA1]
gi|254269688|emb|CAX25660.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 352
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW-DRLQVLPLNQKTTIAGIDV 477
+TH H DH + HG + + T R++ ++ G + Q L ++ I + V
Sbjct: 35 LITHGHADHARA-----GHGTVLATPETLRIMAVRYGEDFCTTRQEARLAERMRIGDVTV 89
Query: 478 TCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPL 537
A H GS I E ++GK ++ +GD++ + + + + P I + T+ P+
Sbjct: 90 FFAPAGHVLGSAQIAIE-RDGKRIVVSGDYKRAPDPTCLP-FEVVPCDVFITEATFGLPV 147
Query: 538 YDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKERLFLEVAR 583
+ P ++ +I+++ + P+ ++G+Y +GK + + + R
Sbjct: 148 FRHPDTRGEVRKLIDSV---TLFPERAHIVGAYALGKAQRVMALLR 190
>gi|13994223|ref|NP_113574.1| protein bicaudal C homolog 1 [Mus musculus]
gi|81867880|sp|Q99MQ1.1|BICC1_MOUSE RecName: Full=Protein bicaudal C homolog 1; Short=Bic-C
gi|13469818|gb|AAK27347.1|AF319464_1 bicaudal-C [Mus musculus]
gi|84105539|gb|AAI11524.1| Bicaudal C homolog 1 (Drosophila) [Mus musculus]
gi|148700015|gb|EDL31962.1| bicaudal C homolog 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 977
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 882 ELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELSKNRRK 941
Query: 299 AVE 301
E
Sbjct: 942 LFE 944
>gi|422293129|gb|EKU20429.1| dna cross-link repair protein pso2 [Nannochloropsis gaditana
CCMP526]
Length = 85
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 27/42 (64%)
Query: 398 VPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK 439
+ GT F VD F +L CS +FLTHFH DHY GL SF H K
Sbjct: 11 IEGTSFLVDGFNFLSPKCSAYFLTHFHSDHYWGLRPSFCHAK 52
>gi|345480322|ref|XP_001605489.2| PREDICTED: protein bicaudal C homolog 1-like [Nasonia vitripennis]
Length = 909
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%)
Query: 233 DVSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
+ S + L S+GL +Y F E+D T L E+DL+ IG+TA G R+KI+ + E+
Sbjct: 806 NYSDLASMLTSVGLEKYIRLFASHEVDMATFPSLVEKDLVEIGITAWGARRKIMLLISEM 865
Query: 293 KKEYS 297
K S
Sbjct: 866 SKRTS 870
>gi|392512873|emb|CAD25809.2| similarity to HYPOTHETICAL PROTEIN Y162_METJA [Encephalitozoon
cuniculi GB-M1]
Length = 643
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGL----TRSFHHGKIYCS----L 444
P + + PF +D + D F+THFH+DH L ++ GK+Y +
Sbjct: 40 PAYTGMASLPF-LDLVDLSKIDAV--FITHFHLDHAAALPFLTEKTSFRGKVYMTHPTKA 96
Query: 445 ITARLVNMKIGIP-----------------WDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
I L+N I I +DR+ + +Q+ + GI V L A H G
Sbjct: 97 ILKWLLNDYIRIINASSDTDFYTETDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLG 156
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT--CPIHTLILDTTY 533
+ + L E + K +L+TGDF EE + ++ C I LI ++TY
Sbjct: 157 AAMFLVEIEKSK-ILYTGDFS-REEDRHLKAAESPGCKIDALITESTY 202
>gi|381395009|ref|ZP_09920716.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329287|dbj|GAB55849.1| exonuclease of the beta-lactamase fold involved in RNA
processing-like protein [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 358
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 124/295 (42%), Gaps = 31/295 (10%)
Query: 417 HWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQ---VLPLNQKTTIA 473
H +TH H DH + H +Y + T ++ ++ G D Q L + +
Sbjct: 31 HAIITHAHADHARA-----GHTHVYATAATLDIMRVRYG--EDHAQNTHALAYEETINLH 83
Query: 474 GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTY 533
+T A H GS +L E G+ ++HTGDF+ + + + P + + T+
Sbjct: 84 AGQLTLYPAGHILGSAQVLIE-YKGQRLVHTGDFKRQSD-PTCAPFVPVPCDVFVTEATF 141
Query: 534 CNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEVARV-LRKKIYV 591
P++ P E Q ++ ++ P++ ++G Y +GK +RL + + ++ K +Y+
Sbjct: 142 GLPVFQHPSIEDETQKLLASL---VRLPESCHVVGVYALGKCQRLLIALRQLGYHKPVYI 198
Query: 592 NAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVA 651
+ A + C + + I E S + + +S++++ + ++
Sbjct: 199 HGALVNL--CALYEEHGIPLGELIEVASLTDLSILKGQIVLAPPSALSDRWSRKLPNVMT 256
Query: 652 FSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY--SEHCSFTELKEFVKFVSPEHI 704
+GW + + K R E+P S+H + +L +K V+P+ +
Sbjct: 257 AMASGWMQIRARSKQK----------RAELPLIISDHSDWQDLITTIKQVNPKEV 301
>gi|89069363|ref|ZP_01156722.1| hypothetical protein OG2516_15040 [Oceanicola granulosus HTCC2516]
gi|89045130|gb|EAR51201.1| hypothetical protein OG2516_15040 [Oceanicola granulosus HTCC2516]
Length = 345
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 128/319 (40%), Gaps = 44/319 (13%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQ-GLTRSFHHGKIYCSLITARLVNMKIG 455
C G F +D +K + +TH H DH + G+ G C+ TA ++ ++G
Sbjct: 14 CAAGD-FHIDPWK----PVARALITHGHSDHARPGM------GAYLCTDGTAPVMRHRLG 62
Query: 456 IPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
R + + + I G V+ A H PGS I E G+ + +GD++ ++ S
Sbjct: 63 AD-IRAETMAYGETRRIGGATVSFHPAGHVPGSAQIRVE-AGGEVWVASGDYKTVDDGLS 120
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + H I ++T+ P++++ Q+ ++ I A + L+G+Y +GK
Sbjct: 121 -TPFEPVACHAFITESTFGLPVFNWTPQDE-LRTQINGWWAANAAEGRASLLGAYALGKA 178
Query: 576 RLFL-----EVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTN----EHESHIHVMPM 626
+ L + +L N + VL+ + D T + +H + + P
Sbjct: 179 QRLLTGLDPSIGPILTHGAVENTNE--VLRAQGLALPDTIRVTPDLVARDHPGALVLAPP 236
Query: 627 WTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEH 686
L S +AGRF + +GW +G ++ R +G I+ S+H
Sbjct: 237 SALGS---------PWAGRFRGASSGFASGWMALRGVRRR--RAADRGFIV------SDH 279
Query: 687 CSFTELKEFVKFVSPEHII 705
+ L ++ I
Sbjct: 280 ADWAGLNAAIRATGAHRIF 298
>gi|321476468|gb|EFX87429.1| hypothetical protein DAPPUDRAFT_312284 [Daphnia pulex]
Length = 454
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
+FL ++GL+ Y + F++ EID L +EDL+ +G+ + G RK +L+ + E+++
Sbjct: 399 QFLETIGLSHYSDLFIQNEIDLAMFTTLKDEDLVSVGIRSFGARKMMLNAVQELRR 454
>gi|449277772|gb|EMC85822.1| Protein bicaudal C like protein 1, partial [Columba livia]
Length = 898
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 804 ELFSKLGLGKYIDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 863
Query: 299 AVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ SN A G+S + H + + V
Sbjct: 864 LFDPSNIRASFLEGGASGRLPRQYHSDIASV 894
>gi|444917247|ref|ZP_21237351.1| mRNA 3-end processing factor [Cystobacter fuscus DSM 2262]
gi|444711373|gb|ELW52320.1| mRNA 3-end processing factor [Cystobacter fuscus DSM 2262]
Length = 339
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 18/199 (9%)
Query: 399 PGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPW 458
P F +DA++ + +TH H DH + ++ + + L+ RL G
Sbjct: 21 PQGDFHIDAWR----PVNRTLITHAHGDHARWGSQQYLGTRPSRGLLRKRL-----GAEA 71
Query: 459 DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSV 518
D + L + TI G+ V+ A H GS I E ++ V+ +GD++ + +
Sbjct: 72 D-ITTLDYGECLTIGGVTVSFHPAGHVLGSAQIRLEYKDEVWVV-SGDYKRDADPTCLP- 128
Query: 519 LQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA--ESFNPKTLFLIGSYTIGK-E 575
+ P T I + T+ P+Y + V + V+ A E+ LF Y +GK +
Sbjct: 129 FEVVPCDTFITEATFALPIYRWDDTRRVAEEVLRWWDANREAGRASVLF---CYALGKAQ 185
Query: 576 RLFLEVARVLRKKIYVNAA 594
RL E+ARV ++++V+ A
Sbjct: 186 RLLAELARVTDREVFVHGA 204
>gi|380481693|emb|CCF41694.1| SAM domain-containing protein [Colletotrichum higginsianum]
Length = 486
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 238 VEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYS 297
+F+ ++GLA+Y ++FV EI + L L +DL +G+ ++G R IL ++ ++KK
Sbjct: 74 ADFISTIGLAQYADSFVENEIVGEALVALQHDDLKSMGIASVGHRLTILKSVYDVKKAQD 133
Query: 298 RAVESNKDAHVSNDGSSSY 316
+ES+ +S D + Y
Sbjct: 134 IPIESDHYVPLSADAEAQY 152
>gi|307177283|gb|EFN66461.1| Protein bicaudal C [Camponotus floridanus]
Length = 729
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
+ L S+GL +Y F E+D T LTE+DL IG+TA G R+KIL + ++ K
Sbjct: 639 LATMLASIGLEKYIRLFTSHEVDMSTFHSLTEKDLCEIGITAWGARRKILLLISDMNKRT 698
Query: 297 S 297
S
Sbjct: 699 S 699
>gi|85709774|ref|ZP_01040839.1| hypothetical protein NAP1_12853 [Erythrobacter sp. NAP1]
gi|85688484|gb|EAQ28488.1| hypothetical protein NAP1_12853 [Erythrobacter sp. NAP1]
Length = 345
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/298 (20%), Positives = 127/298 (42%), Gaps = 38/298 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIG---------IPWDRLQVLPLNQK 469
+TH H DH +G HG+ + T ++ ++ IP + +P+
Sbjct: 36 LVTHGHADHARG-----GHGETIATPETLAIMELRYRTGSQDEAGEIP---HKAVPVEYG 87
Query: 470 TTIA---GIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHT 526
T++ G+D T + A H GS IL E G+ V+ TGD++ + + + + P
Sbjct: 88 ETLSLGGGVDATFIPAGHVLGSAQILLE-HAGERVIITGDYKRRAD-PTCAPFKVAPCDI 145
Query: 527 LILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARV 584
I + T+ P++ P + ++ A++A +P L+G+Y +GK +R+ E+ A
Sbjct: 146 FITEATFGLPVFTHPPIADEMAKLLSALEA---HPDQCVLVGAYALGKAQRVIAELRAAG 202
Query: 585 LRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFKRLKHMSNQYAG 644
IY++ A ++ + + ++ + S + +A L +++++
Sbjct: 203 HSAPIYLHGALEKMCRLYEEHGVNLGELRLVSNHSKEEMQGSIVMAPPSAL---NDRWSR 259
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPE 702
R + +GW + + + G + + S+H + EL + + V P+
Sbjct: 260 RLPNPITAMASGWMRVRQRARQRG--------VELPLVISDHADWNELTDTIAEVDPQ 309
>gi|195648657|gb|ACG43796.1| SAM domain family protein [Zea mays]
Length = 209
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTL 289
SP+ FL SLGL +Y F EE+D L+ +TE DL +G+ +GPRKKI+ L
Sbjct: 152 SPLGSFLSSLGLEKYSITFQAEEVDMAALRHMTESDLKALGI-PMGPRKKIILAL 205
>gi|301508515|gb|ADK78219.1| bicaudal-C protein, partial [Schmidtea mediterranea]
Length = 687
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
VV+ L SL L+R+ + F++ E+D+ T LTEEDL +GV G R+K++ + +I
Sbjct: 625 VVKVLTSLDLSRFADCFIKNEVDFTTFCSLTEEDLKELGVNTFGARRKLVLAINDI 680
>gi|327279520|ref|XP_003224504.1| PREDICTED: protein bicaudal C homolog 1-like [Anolis carolinensis]
Length = 1109
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYSR 298
E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K +
Sbjct: 1015 ELFSKLGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNKNRRK 1074
Query: 299 AVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ SN A G+S + H + + V
Sbjct: 1075 LFDPSNIRASFLEGGASGRLPRQYHSDIASV 1105
>gi|433639766|ref|YP_007285526.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Halovivax ruber XH-70]
gi|433291570|gb|AGB17393.1| putative exonuclease of the beta-lactamase fold involved in RNA
processing [Halovivax ruber XH-70]
Length = 571
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 19/116 (16%)
Query: 409 KYLRGDCSHWFLTHFHMDHYQGLTRSFHHGK-IYCSLITARLVN--MKIG------IPWD 459
+YL C LTH H+DHYQ L + H +Y + TA+++ + G D
Sbjct: 52 EYLSAVC----LTHAHLDHYQSLGEALDHAAPLYAAPDTAQILEDVFEAGEDHYDLAGTD 107
Query: 460 RL--QVLPLNQKTTI-AGIDVTCLEANHCPGSIIILFEPQNG---KAVLHTGDFRF 509
R+ Q+ P+++ T I +G+ V + A H PG+ LFE ++G + +L TGDF
Sbjct: 108 RVLEQLTPIDEWTQIVSGLRVCPVPAGHAPGAAGFLFEVEDGDERRTILITGDFTM 163
>gi|333895370|ref|YP_004469245.1| RNA procession exonuclease-like protein [Alteromonas sp. SN2]
gi|332995388|gb|AEF05443.1| RNA procession exonuclease-like protein [Alteromonas sp. SN2]
Length = 365
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 140/327 (42%), Gaps = 43/327 (13%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQ-GLTRSFHHGKIYCSLITAR----LVN 451
CVPG F +D + + +TH H DH + G R F H + +++T R +
Sbjct: 27 CVPGD-FYIDPMQ----PVATALVTHGHADHARAGHKRVFAHPQT-MAIMTTRYGDDMAE 80
Query: 452 MKIGIPW------DRLQVLPLNQKTTIA---GIDVTCLEANHCPGSIIILFEPQNGKAVL 502
++I +P+ D + N +T I VT A H GS +L E + V+
Sbjct: 81 VQIPVPYRESVEFDEVITTDSNSASTEQEQRKIKVTFYPAGHILGSSQLLIEYAGYRLVI 140
Query: 503 HTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPK 562
+GD++ + + + P LI + T+ P++ P E IQ ++ ++ P
Sbjct: 141 -SGDYKRRHD-PTCPPFEVVPCDVLITEATFGLPVFAHPPIEKEIQKLLHSLDV---FPT 195
Query: 563 TLFLIGSYTIGK-ERLFLEVARV-LRKKIYVNAAKFRVLKCLDFSKEDIQW---FTTNEH 617
L+G+Y +GK +R+ L + K IY++ A ++ C + +E I +E
Sbjct: 196 RCHLVGTYALGKCQRVILALREAGYTKPIYLHGALLKL--CDLYEREGIALGDIIPVSEV 253
Query: 618 ESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTII 677
E + LA L +++++ + A +GW + + K R + II
Sbjct: 254 EDKALLAGEIVLAPPSAL---ADRWSRSLPHVRAVLASGWMQIRARAKQ--RNAELPLII 308
Query: 678 RYEVPYSEHCSFTELKEFVKFVSPEHI 704
S+HC + EL + + V+P +
Sbjct: 309 ------SDHCDWPELLQTLTEVNPSEV 329
>gi|67516311|ref|XP_658041.1| hypothetical protein AN0437.2 [Aspergillus nidulans FGSC A4]
gi|40747380|gb|EAA66536.1| hypothetical protein AN0437.2 [Aspergillus nidulans FGSC A4]
gi|259489316|tpe|CBF89485.1| TPA: DNA repair protein, putative (AFU_orthologue; AFUA_1G04570)
[Aspergillus nidulans FGSC A4]
Length = 845
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 461 LQVLPLNQKTTI-----AGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
L+ +PLN T I I VT L+ANHC G+++ L E +GKA+L+TGD R
Sbjct: 112 LRPIPLNTPTEIDLTPKLSIRVTLLDANHCTGAVMFLIE-GDGKAILYTGDIR------- 163
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
T +HT + T FP + I ++ + E + T F ++T G E
Sbjct: 164 ----DTTFVHTSHIPHT-------FPTKAEGIAELLRKL--EPYPEDTNFYFRAWTFGYE 210
Query: 576 RLFLEVARVLRKKIYVNAAKF 596
+++ +A K + F
Sbjct: 211 EVWMALAAAFDTKASICTGLF 231
>gi|395491837|ref|ZP_10423416.1| RNA procession exonuclease-like protein [Sphingomonas sp. PAMC
26617]
Length = 344
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/294 (19%), Positives = 117/294 (39%), Gaps = 37/294 (12%)
Query: 419 FLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWDRLQVLPLNQKTTIAGIDVT 478
+TH H DH +G HG ++ + T +++ + G + + + T
Sbjct: 46 LVTHGHADHARG-----GHGAVWATPETLAIMDARYGA--QAGHPVAYGESHDFGDVRAT 98
Query: 479 CLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQTCPIHTLILDTTYCNPLY 538
+ A H GS IL E G+ ++ +GD++ + + + + I + T+ P++
Sbjct: 99 FVPAGHVLGSAQILLE-YRGERIVVSGDYKRRPD-PTCTPFEPVKCDVFITEATFGLPVF 156
Query: 539 DFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGK-ERLFLEV-ARVLRKKIYVNAAKF 596
P I +I A+ A NP L+G+Y +GK +R+ E+ R IY++ A
Sbjct: 157 RHPDTGDEIDKLIAALHA---NPDRCVLVGAYALGKAQRVIAELRVRGHAAPIYIHGALE 213
Query: 597 RVLKCLDFSKEDIQWF------TTNEHESHIHVMPMWTLASFKRLKHMSNQYAGRFSLIV 650
R+ D+ E H+ + P LA ++++ R +
Sbjct: 214 RLCALYQAHGVDLGELRPATTAAKAEMMGHVVIAPPGALA---------DRWSRRLPDPI 264
Query: 651 AFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
+GW + + G + + S+H + EL + + ++P+ +
Sbjct: 265 TAMASGWMRVRQRAVQRG--------VELPLILSDHADWDELTKTLTEIAPKEV 310
>gi|242075510|ref|XP_002447691.1| hypothetical protein SORBIDRAFT_06g013230 [Sorghum bicolor]
gi|241938874|gb|EES12019.1| hypothetical protein SORBIDRAFT_06g013230 [Sorghum bicolor]
Length = 211
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 234 VSPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTL 289
SP+ FL SLGL +Y F EE+D L+ +T+ DL +G+ +GPRKKI+ L
Sbjct: 153 ASPLDSFLSSLGLEKYSITFQAEEVDMAALRHMTDSDLKALGI-PMGPRKKIILAL 207
>gi|380805479|gb|AFE74615.1| protein bicaudal C homolog 1, partial [Macaca mulatta]
Length = 186
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G+T G R+K+L + E+ K
Sbjct: 125 SDLPELFSKLGLGKYTDVFQQQEIDLQTFLTLTDQDLKELGITTFGARRKMLLAISELNK 184
>gi|433615935|ref|YP_007192730.1| SAM domain (Sterile alpha motif)/Adenylate and Guanylate cyclase
catalytic domain protein [Sinorhizobium meliloti GR4]
gi|429554182|gb|AGA09131.1| SAM domain (Sterile alpha motif)/Adenylate and Guanylate cyclase
catalytic domain protein [Sinorhizobium meliloti GR4]
Length = 1117
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEY 296
+ +L SLGL Y AF +ID L L EDL +GV ++G R+K+ + +++ +
Sbjct: 3 IAAWLRSLGLGEYASAFRDNDIDAQLLLQLNAEDLKDLGVASIGHRRKLFDAIADLRDQD 62
Query: 297 SRAVESNKDAHVSNDGSSSYHGSERHK 323
+R+++ + D ++ +S G+ER +
Sbjct: 63 ARSIKVSMDRPLAAPTASPEAGAERRQ 89
>gi|225457142|ref|XP_002283643.1| PREDICTED: uncharacterized protein LOC100267308 [Vitis vinifera]
gi|297733839|emb|CBI15086.3| unnamed protein product [Vitis vinifera]
Length = 294
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 237 VVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKE 295
V FLHSLGL +Y F EEID L+ + + DL +G+ +GPRKKIL L K+
Sbjct: 236 VASFLHSLGLGKYIILFQAEEIDMTALKQMRDNDLKELGI-PMGPRKKILLALSPHSKQ 293
>gi|444308663|ref|ZP_21144307.1| putative mRNA 3-end processing factor [Ochrobactrum intermedium
M86]
gi|443487985|gb|ELT50743.1| putative mRNA 3-end processing factor [Ochrobactrum intermedium
M86]
Length = 337
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 131/313 (41%), Gaps = 30/313 (9%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGI 456
C PG F +D + +TH H DH RS H + + T ++ ++ G+
Sbjct: 16 CPPGD-FYIDPVR----PVERALITHGHSDH----ARS-GHTHVLATRETLDIMALRYGV 65
Query: 457 PW-DRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMAS 515
+ + Q + L + T+ G+ ++ A H GS I E +G ++ +GD++ + + +
Sbjct: 66 NFAETTQPVSLGETLTLNGVRISFHGAGHVLGSAQIAVE-MDGTRIVASGDYKRAAD-PT 123
Query: 516 MSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE 575
+ + I + T+ P++ P I ++++I+ P+ L+G+Y++GK
Sbjct: 124 CAPFEPVACDVFITEATFALPVFRHPDAAHEIATLLKSIRQ---FPERAHLVGAYSLGKA 180
Query: 576 RLFLEVAR--VLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESHIHVMPMWTLASFK 633
+ +++ R + IY++ A + + D+ E
Sbjct: 181 QRVIKLIRNAGYWEPIYIHGALENICEYYQTQGVDLGPLEPATLERSAVQPDFAGKIIVG 240
Query: 634 RLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPY--SEHCSFTE 691
S+++A RF V +GW + + K QQG E+P S+HC + E
Sbjct: 241 PPSAFSDRWARRFPDPVPAFASGWMRIRQRAK------QQGV----ELPLIISDHCDWDE 290
Query: 692 LKEFVKFVSPEHI 704
L + ++P +
Sbjct: 291 LTATITEIAPAEV 303
>gi|339323145|ref|YP_004682039.1| hypothetical protein CNE_2c18510 [Cupriavidus necator N-1]
gi|338169753|gb|AEI80807.1| DNA ligase Lig [Cupriavidus necator N-1]
Length = 379
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 25/188 (13%)
Query: 397 CVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCS-----LITARLVN 451
C PG F +D ++ +TH H DH + F H C+ ++ ARL
Sbjct: 33 CPPGD-FYIDPWR----PVERAVITHAHSDHAR-----FGHAHYLCAEPGRGVLLARLPG 82
Query: 452 MKIGIPWDRLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSE 511
+ L LP ++ G+ ++ A H GS + E G+ + +GD++ E
Sbjct: 83 ID-------LNTLPYGKRIRHHGVTLSLHPAGHVLGSAQLRVE-YGGQVWVASGDYKL-E 133
Query: 512 EMASMSVLQTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYT 571
+ + P T I ++T+ P+Y +P Q A++ + Q + + ++ +YT
Sbjct: 134 ADGTCDPFEPVPCDTFITESTFGLPIYRWPPQAALMAEIFHWWQTNAQAGRA-SIVYAYT 192
Query: 572 IGKERLFL 579
GK + L
Sbjct: 193 FGKAQRIL 200
>gi|19074699|ref|NP_586205.1| similarity to HYPOTHETICAL PROTEIN Y162_METJA [Encephalitozoon
cuniculi GB-M1]
Length = 730
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 32/168 (19%)
Query: 393 PTWCCVPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGL----TRSFHHGKIYCS----L 444
P + + PF +D + D F+THFH+DH L ++ GK+Y +
Sbjct: 127 PAYTGMASLPF-LDLVDLSKIDAV--FITHFHLDHAAALPFLTEKTSFRGKVYMTHPTKA 183
Query: 445 ITARLVNMKIGIP-----------------WDRLQVLPLNQKTTIAGIDVTCLEANHCPG 487
I L+N I I +DR+ + +Q+ + GI V L A H G
Sbjct: 184 ILKWLLNDYIRIINASSDTDFYTETDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLG 243
Query: 488 SIIILFEPQNGKAVLHTGDFRFSEEMASMSVLQT--CPIHTLILDTTY 533
+ + L E + K +L+TGDF EE + ++ C I LI ++TY
Sbjct: 244 AAMFLVEIEKSK-ILYTGDFS-REEDRHLKAAESPGCKIDALITESTY 289
>gi|322795353|gb|EFZ18158.1| hypothetical protein SINV_16517 [Solenopsis invicta]
Length = 563
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 239 EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKKEYS 297
L S+GL +Y F E+D T LTE+DL IG+TA G R+KI+ + E+ K S
Sbjct: 482 SMLTSIGLEKYIRLFTSHEVDMATFPSLTEKDLCEIGITAWGARRKIMLLISEMNKRTS 540
>gi|148223549|ref|NP_001081996.1| protein bicaudal C homolog 1-A [Xenopus laevis]
gi|82115500|sp|Q9IA00.1|BIC1A_XENLA RecName: Full=Protein bicaudal C homolog 1-A; Short=Bic-C-A
gi|7800180|gb|AAF69826.1|AF224746_1 bicaudal-C [Xenopus laevis]
Length = 963
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G++ G R+K+L + E+ K
Sbjct: 865 SDLPELFSKLGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGISTFGARRKMLLAISELNK 924
Query: 295 EYSRAVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ E +N A G+S + H + + V
Sbjct: 925 NRRKLFEPTNIRASFLEGGASGRLPRQYHTDIASV 959
>gi|213625320|gb|AAI70337.1| Bic-C protein [Xenopus laevis]
Length = 964
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 1/95 (1%)
Query: 235 SPVVEFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEIKK 294
S + E LGL +Y + F ++EID T LT++DL +G++ G R+K+L + E+ K
Sbjct: 866 SDLPELFSKLGLGKYTDIFQQQEIDLQTFLTLTDQDLKELGISTFGARRKMLLAISELNK 925
Query: 295 EYSRAVE-SNKDAHVSNDGSSSYHGSERHKEASKV 328
+ E +N A G+S + H + + V
Sbjct: 926 NRRKLFEPTNIRASFLEGGASGRLPRQYHTDIASV 960
>gi|400621224|gb|AFP87428.1| bicaudal C-like protein1, partial [Nematostella vectensis]
Length = 239
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 244 LGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKILHTLCEI 292
LGLA+Y F +EID T LTE+DL IGV+ GPR+K+L + ++
Sbjct: 143 LGLAKYFGKFQEQEIDLQTFMTLTEDDLKEIGVSTFGPRRKLLMAISDL 191
>gi|242211448|ref|XP_002471562.1| predicted protein [Postia placenta Mad-698-R]
gi|220729334|gb|EED83210.1| predicted protein [Postia placenta Mad-698-R]
Length = 367
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 68/167 (40%), Gaps = 28/167 (16%)
Query: 561 PKTLFLIGSYTIGKERLFLEVARVLRKKIYVNAAKFRVLKCLDFSKEDIQWFTTNEHESH 620
P TLF I ++T G E + V+R R +I+V+ KF V K L+ T + +
Sbjct: 130 PTTLFFINAWTWGYEDVLKAVSRTFRTRIHVDRYKFGVYKHLEGEPFLQNIITQDAASTR 189
Query: 621 IHVMPMWTLASFKRLKHMS-------NQ--YAGR----------FSLIVAFSPTGWTFSK 661
H F R H+S NQ AGR + V GW
Sbjct: 190 FH-----ACERFDRCNHVSVVAEGPRNQTVAAGRSVNANGEHVVYVNPVTMGVAGWDLYL 244
Query: 662 GKKKSPGRRWQQGTIIRYE-VPYSEHCSFTELKEFVKFVSPEHIIPS 707
+ + R +G I+ + VP S H EL++FV P+ ++P+
Sbjct: 245 KETRE---RLARGEIVNHLLVPLSRHSPLPELRDFVSLFRPKQVVPN 288
>gi|154336657|ref|XP_001564564.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061599|emb|CAM38630.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 657
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 6/67 (8%)
Query: 645 RFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSEHCSFTELKEFVKFVSPEHI 704
R+ ++ PTGW K+ + ++ T++R VPYSEHC+F EL +FV+FV+P +
Sbjct: 423 RYDQVLIVEPTGWC----KRCASRDVSEKYTLLR--VPYSEHCAFHELLQFVQFVNPACV 476
Query: 705 IPSVNND 711
+P+V+ +
Sbjct: 477 VPTVSEE 483
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 477 VTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFS 510
V + ANHCPG+++ LF VLHTGDFRFS
Sbjct: 55 VRLIPANHCPGAVMFLFVSSFFGTVLHTGDFRFS 88
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 19/77 (24%)
Query: 524 IHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQA--------------ESFNP-----KTL 564
+ L LD T+C+P Y FP Q V Q VIE + + + +P +
Sbjct: 158 LDVLFLDNTFCSPAYKFPSQWKVTQTVIEVLLSLFHRAACCARAAVPLTGHPPRRQVRCA 217
Query: 565 FLIGSYTIGKERLFLEV 581
LIG YTIGKER+ L +
Sbjct: 218 VLIGCYTIGKERVALAL 234
>gi|108757601|ref|YP_634052.1| hypothetical protein MXAN_5915 [Myxococcus xanthus DK 1622]
gi|108461481|gb|ABF86666.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length = 325
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%)
Query: 400 GTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFHHGKIYCSLITARLVNMKIGIPWD 459
GTP +DA + F++H H DH H + T R + ++G P
Sbjct: 14 GTPLSLDAKR----KSPLCFVSHGHSDHIA------RHESTIATAATLRFMTHRLG-PVR 62
Query: 460 RLQVLPLNQKTTIAGIDVTCLEANHCPGSIIILFEPQNGKAVLHTGDFRFSEEMASMSVL 519
+ +P Q + + + L A H GS + +G+ +++TGD + + + +
Sbjct: 63 EPREVPFRQPFELGPLVLELLPAGHILGSAQLRVTRPDGRRIVYTGDLNVAPSLTAEAT- 121
Query: 520 QTCPIHTLILDTTYCNPLYDFPKQEAVIQFVIEAIQAESFNPKTLFLIGSYTIGKE---- 575
+ TL++++T+ +P Y FP + V+ V ++ + L+G Y +GK
Sbjct: 122 EVAECDTLVIESTFGHPRYRFPPRPEVLGQVETWLRMQLERGAVPVLLG-YPLGKSQEAM 180
Query: 576 -----RLFLEVARVLRKKIYVNAAKFRV----LKCLDFSKEDIQ-WFTTNEHESHIHVMP 625
R F VA ++ A+ V L+C D E + F H + P
Sbjct: 181 KHLAGRGFPLVAHSSIYEVAQLYAELGVPIENLRCYDGKVEPGEVLFFPPHHARGGALAP 240
Query: 626 MWTLASFKRLKHMSNQYAGRFSLIVAFSPTGWTFSKGKKKSPGRRWQQGTIIRYEVPYSE 685
+W R + ++ TGW +G RR+ G + + P S+
Sbjct: 241 LWP----------------RATAVL----TGWAVDRGAV----RRY--GADVAF--PLSD 272
Query: 686 HCSFTELKEFVKFVSPEHII 705
H F L + K ++
Sbjct: 273 HADFPGLVSYAKSTGAREVL 292
>gi|195438138|ref|XP_002066994.1| GK24769 [Drosophila willistoni]
gi|194163079|gb|EDW77980.1| GK24769 [Drosophila willistoni]
Length = 936
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 240 FLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKIL---HTL 289
L SLGL Y + FV EID + LTEE+L+ +G+TA G RKK+L HTL
Sbjct: 844 LLTSLGLEHYIKIFVLNEIDLEMFTTLTEENLMELGITAFGARKKLLTAIHTL 896
>gi|356504214|ref|XP_003520893.1| PREDICTED: uncharacterized protein LOC100784706 [Glycine max]
Length = 207
Score = 51.2 bits (121), Expect = 0.002, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 227 SPQKAVDVSPVV-EFLHSLGLARYEEAFVREEIDWDTLQWLTEEDLIGIGVTALGPRKKI 285
+P+K+ P V EFL SLGL +Y F EE+D L +T+EDL +G+ +GPRKKI
Sbjct: 141 APKKSWKAGPSVDEFLRSLGLEKYLITFQAEEVDMTALNHMTDEDLKAMGI-PMGPRKKI 199
Query: 286 LHTL 289
L L
Sbjct: 200 LLAL 203
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,640,734,782
Number of Sequences: 23463169
Number of extensions: 509767914
Number of successful extensions: 1311440
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 1586
Number of HSP's that attempted gapping in prelim test: 1306070
Number of HSP's gapped (non-prelim): 3701
length of query: 725
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 575
effective length of database: 8,839,720,017
effective search space: 5082839009775
effective search space used: 5082839009775
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)