BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004879
(725 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1RZU|A Chain A, Crystal Structure Of The Glycogen Synthase From A.
Tumefaciens In Complex With Adp
pdb|1RZU|B Chain B, Crystal Structure Of The Glycogen Synthase From A.
Tumefaciens In Complex With Adp
Length = 485
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 114/214 (53%), Gaps = 10/214 (4%)
Query: 459 GKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDV 518
G +PD++H HDWQ A P+Y + S T HN +QG A + L
Sbjct: 128 GWRPDMVHAHDWQAAMT-PVYMRYAETPEIPS---LLTIHNIAFQGQFGANIFSKLALPA 183
Query: 519 QQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK 578
M+ ++ ++ LKG + + ++TVSPSYA+E+ T+E G GL + +
Sbjct: 184 HAFG----MEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAH 239
Query: 579 KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCI 638
GI+NGID D WNPATD + Y+A +L+ +A NK+++ +H + D PL I
Sbjct: 240 VLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID--DDGSPLFCVI 297
Query: 639 TRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPV 672
+RL QKG+ L+ A+ + LGG+ ++LG+ V
Sbjct: 298 SRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDV 331
>pdb|1RZV|A Chain A, Crystal Structure Of The Glycogen Synthase From
Agrobacterium Tumefaciens (Non-Complexed Form)
pdb|1RZV|B Chain B, Crystal Structure Of The Glycogen Synthase From
Agrobacterium Tumefaciens (Non-Complexed Form)
Length = 485
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 111/214 (51%), Gaps = 10/214 (4%)
Query: 459 GKQPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDV 518
G +PD +H HDWQ A P+Y + S T HN +QG A + L
Sbjct: 128 GWRPDXVHAHDWQAAXT-PVYXRYAETPEIPS---LLTIHNIAFQGQFGANIFSKLALPA 183
Query: 519 QQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK 578
+ ++ ++ LKG + + ++TVSPSYA+E+ T+E G GL + +
Sbjct: 184 HAFG----XEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGXGLEGVIGSRAH 239
Query: 579 KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCI 638
GI+NGID D WNPATD + Y+A +L+ +A NK+++ +H + D PL I
Sbjct: 240 VLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID--DDGSPLFCVI 297
Query: 639 TRLVPQKGVHLIRHAIYRTLELGGQFILLGSSPV 672
+RL QKG+ L A+ + LGG+ ++LG+ V
Sbjct: 298 SRLTWQKGIDLXAEAVDEIVSLGGRLVVLGAGDV 331
>pdb|3D1J|A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c408s)
Length = 477
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 13/215 (6%)
Query: 461 QPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQ 520
+PD++H HDW A +AP Y +G A+ FT HN YQG A + L
Sbjct: 129 RPDVVHAHDWH-AGLAPAY---LAARG-RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSF 183
Query: 521 LNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK-- 578
N + + +I+ LK + +++ +T VSP+YA+E+ + G+ L +
Sbjct: 184 FN----IHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG 239
Query: 579 KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCI 638
+ G+LNG+D W+P TD L +Y + L+ KAENK ++ +GL D + PL +
Sbjct: 240 RLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGL-KVDDKVPLFAVV 298
Query: 639 TRLVPQKGVHLIRHAIYRTLELGGQFILLGSS-PV 672
+RL QKG+ L+ A+ LE GGQ LLG+ PV
Sbjct: 299 SRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV 333
>pdb|2QZS|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With
Adp And Glucose(Wtgsb)
pdb|2R4T|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With
Adp And Glucose(Wtgsc)
pdb|2R4U|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With
Adp And Glucose(Wtgsd)
pdb|3GUH|A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With
Adp And Dgm
Length = 485
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 13/215 (6%)
Query: 461 QPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQ 520
+PD++H HDW A +AP Y +G A+ FT HN YQG A + L
Sbjct: 129 RPDVVHAHDWH-AGLAPAY---LAARG-RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSF 183
Query: 521 LNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK-- 578
N + + +I+ LK + +++ +T VSP+YA+E+ + G+ L +
Sbjct: 184 FN----IHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG 239
Query: 579 KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCI 638
+ G+LNG+D W+P TD L +Y + L+ KAENK ++ +GL D + PL +
Sbjct: 240 RLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGL-KVDDKVPLFAVV 298
Query: 639 TRLVPQKGVHLIRHAIYRTLELGGQFILLGSS-PV 672
+RL QKG+ L+ A+ LE GGQ LLG+ PV
Sbjct: 299 SRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV 333
>pdb|3COP|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex
With Adp And Acceptor Analogue Heppso
pdb|3CX4|A Chain A, Crystal Structure Of E.Coli Gs Mutant E377a In Complex
With Adp And Oligosaccharides
Length = 485
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 112/215 (52%), Gaps = 13/215 (6%)
Query: 461 QPDIIHCHDWQTAFVAPLYWDLYVPKGLNSARVCFTCHNFEYQGTAPAKELASCGLDVQQ 520
+PD++H HDW A +AP Y +G A+ FT HN YQG A + L
Sbjct: 129 RPDVVHAHDWH-AGLAPAY---LAARG-RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSF 183
Query: 521 LNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSK-- 578
N + + +I+ LK + +++ +T VSP+YA+E+ + G+ L +
Sbjct: 184 FN----IHGLEFNGQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREG 239
Query: 579 KFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCI 638
+ G+LNG+D W+P TD L +Y + L+ KAENK ++ +GL D + PL +
Sbjct: 240 RLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGL-KVDDKVPLFAVV 298
Query: 639 TRLVPQKGVHLIRHAIYRTLELGGQFILLGSS-PV 672
+RL QKG+ L+ A+ LE GGQ LLG+ PV
Sbjct: 299 SRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPV 333
>pdb|3VUE|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I
Catalytic Domain
pdb|3VUF|A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I
Catalytic Domain In Complex With Adp
Length = 536
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 161/380 (42%), Gaps = 66/380 (17%)
Query: 333 LHVIHIAAEMAPXXXXXXXXXXXXXXXXXXQKKGHLVEIVLPKYDCMQY----------- 381
++V+ + AEMAP GH V ++ P+YD QY
Sbjct: 10 MNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYD--QYKDAWDTSVVAE 67
Query: 382 ----DRIDDLRALDV----VVESYFDGRLFKNKVWVSTIEGLPVYFIEPHHPDKFFWRGQ 433
DR + +R V + D F KVW T E + + PD G
Sbjct: 68 IKVADRYERVRFFHCYKRGVDRVFIDHPSFLEKVWGKTGEKI-------YGPDT----GV 116
Query: 434 FYGEHDDXXXXXXXXXAALEL--LLQAGKQP--------DIIH-CHDWQTAFVAPLYWDL 482
Y D+ AALE +L P D++ C+DW T +A +
Sbjct: 117 DY--KDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGPLASYLKNN 174
Query: 483 YVPKGL-NSARVCFTCHNFEYQGTAPAKELASCGLDVQQLNRPDRMQDN----SAHD--- 534
Y P G+ +A+V F HN YQG + D +LN +R + + +D
Sbjct: 175 YQPNGIYRNAKVAFCIHNISYQGRFAFE-------DYPELNLSERFRSSFDFIDGYDTPV 227
Query: 535 ---RINPLKGAIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDA 591
+IN +K I+ ++ V TVSP YA+E+ S +G GI+NG+D
Sbjct: 228 EGRKINWMKAGILEADRVLTVSPYYAEEL-ISGIARGCELDNIMRLTGITGIVNGMDVSE 286
Query: 592 WNPATDTFLKVQYNAND-LQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQKGVHLI 650
W+P+ D ++ +Y+A ++ KA NKE+++ GL D + PL+ I RL QKG ++
Sbjct: 287 WDPSKDKYITAKYDATTAIEAKALNKEALQAEAGL-PVDRKIPLIAFIGRLEEQKGPDVM 345
Query: 651 RHAIYRTLELGGQFILLGSS 670
AI ++ Q +LLG+
Sbjct: 346 AAAIPELMQEDVQIVLLGTG 365
>pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase
With Open And Closed Conformations
pdb|3FRO|B Chain B, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase
With Open And Closed Conformations
pdb|3FRO|C Chain C, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase
With Open And Closed Conformations
Length = 439
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 73/205 (35%), Gaps = 51/205 (24%)
Query: 455 LLQAGKQPDIIHCHDWQTAFVAPLYWDLY-VPKGLNSARVCFTCHNFEYQGTAPAKELAS 513
LL+ PD++H HDW T F L + +P FT H + PA
Sbjct: 116 LLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-------AVFTIHRLN-KSKLPAFYFHE 167
Query: 514 CGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE----VRTSEGGQGL 569
GL + PD I+P ++IVTTVS Y + R EG
Sbjct: 168 AGLS-ELAPYPD----------IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG---- 212
Query: 570 HSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSAD 629
K + NGID WN + T + E K+S+ G+
Sbjct: 213 ---------KITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMDEG- 251
Query: 630 ARKPLVGCITRLVPQKGVHLIRHAI 654
+G R QKGV ++ AI
Sbjct: 252 VTFMFIGRFDR--GQKGVDVLLKAI 274
>pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi
pdb|2BIS|B Chain B, Structure Of Glycogen Synthase From Pyrococcus Abyssi
pdb|2BIS|C Chain C, Structure Of Glycogen Synthase From Pyrococcus Abyssi
Length = 440
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 73/205 (35%), Gaps = 51/205 (24%)
Query: 455 LLQAGKQPDIIHCHDWQTAFVAPLYWDLY-VPKGLNSARVCFTCHNFEYQGTAPAKELAS 513
LL+ PD++H HDW T F L + +P FT H + PA
Sbjct: 117 LLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-------AVFTIHRLN-KSKLPAFYFHE 168
Query: 514 CGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE----VRTSEGGQGL 569
GL + PD I+P ++IVTTVS Y + R EG
Sbjct: 169 AGLS-ELAPYPD----------IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG---- 213
Query: 570 HSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSAD 629
K + NGID WN + T + E K+S+ G+
Sbjct: 214 ---------KITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMDEG- 252
Query: 630 ARKPLVGCITRLVPQKGVHLIRHAI 654
+G R QKGV ++ AI
Sbjct: 253 VTFMFIGRFDR--GQKGVDVLLKAI 275
>pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From
Pyrococcus Abyssi
pdb|3L01|B Chain B, Crystal Structure Of Monomeric Glycogen Synthase From
Pyrococcus Abyssi
Length = 428
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 73/205 (35%), Gaps = 51/205 (24%)
Query: 455 LLQAGKQPDIIHCHDWQTAFVAPLYWDLY-VPKGLNSARVCFTCHNFEYQGTAPAKELAS 513
LL+ PD++H HDW T F L + +P FT H + PA
Sbjct: 116 LLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-------AVFTIHRLN-KSKLPAFYFHE 167
Query: 514 CGLDVQQLNRPDRMQDNSAHDRINPLKGAIVFSNIVTTVSPSYAQE----VRTSEGGQGL 569
GL + PD I+P ++IVTTVS Y + R EG
Sbjct: 168 AGLS-ELAPYPD----------IDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG---- 212
Query: 570 HSTLNFHSKKFVGILNGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSAD 629
K + NGID WN + T + E K+S+ G+
Sbjct: 213 ---------KITYVFNGIDCSFWNESYLT-----------GSRDERKKSLLSKFGMDEG- 251
Query: 630 ARKPLVGCITRLVPQKGVHLIRHAI 654
+G R QKGV ++ AI
Sbjct: 252 VTFMFIGRFDR--GQKGVDVLLKAI 274
>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb'
Bound To Gdp (Orthorhombic Crystal Form)
pdb|3OKP|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb'
Bound To Gdp-Man (Orthorhombic Crystal Form)
Length = 394
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 585 NGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQ 644
+G+D + PAT E+K + RK LG + P++ C +RLVP+
Sbjct: 170 SGVDVKRFTPAT----------------PEDKSATRKKLGFTDT---TPVIACNSRLVPR 210
Query: 645 KGVHLIRHAIYRTLEL--GGQFILLGSS 670
KG + A+ + + Q +++GS
Sbjct: 211 KGQDSLIKAMPQVIAARPDAQLLIVGSG 238
>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In
Complex With Gdp-Man (Triclinic Crystal Form)
pdb|3OKA|B Chain B, Crystal Structure Of Corynebacterium Glutamicum Pimb' In
Complex With Gdp-Man (Triclinic Crystal Form)
Length = 381
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 585 NGIDTDAWNPATDTFLKVQYNANDLQGKAENKESIRKHLGLSSADARKPLVGCITRLVPQ 644
+G+D + PAT E+K + RK LG + P++ C +RLVP+
Sbjct: 170 SGVDVKRFTPAT----------------PEDKSATRKKLGFTDT---TPVIACNSRLVPR 210
Query: 645 KGVHLIRHAIYRTLEL--GGQFILLGSS 670
KG + A+ + + Q +++GS
Sbjct: 211 KGQDSLIKAMPQVIAARPDAQLLIVGSG 238
>pdb|3N53|A Chain A, Crystal Structure Of A Response Regulator Receiver
Modulated Diguanylate Cyclase From Pelobacter
Carbinolicus
pdb|3N53|B Chain B, Crystal Structure Of A Response Regulator Receiver
Modulated Diguanylate Cyclase From Pelobacter
Carbinolicus
Length = 140
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 542 AIVFSNIVTTVSPSYAQEVRTSEGGQGLHSTLNFHSKKFVGILNGIDTDAWNPATDTFLK 601
I+ +I+ SP+ +++ S+G + + L F S+ I+NG+ + A D +L
Sbjct: 50 VILDXDIIGENSPNLCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGA-----DDYLT 104
Query: 602 VQYNANDLQGKAE 614
+N NDL + E
Sbjct: 105 KPFNRNDLLSRIE 117
>pdb|3L8M|A Chain A, Crystal Structure Of A Probable Thiamine Pyrophosphokinase
From Staphylococcus Saprophyticus Subsp. Saprophyticus.
Northeast Structural Genomics Consortium Target Id Syr86
pdb|3L8M|B Chain B, Crystal Structure Of A Probable Thiamine Pyrophosphokinase
From Staphylococcus Saprophyticus Subsp. Saprophyticus.
Northeast Structural Genomics Consortium Target Id Syr86
Length = 212
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 662 GQFILLGSSPVPHIQVYPILLSSFSFLRKHIFNICNLYIKLGQGGDLTVNNNCEPWLHHI 721
GQF + S P+I P++ + L+ +N+ N +KLG LT++N +I
Sbjct: 140 GQFNVTYSEQFPYISFIPVIYPTVISLKGFKYNLQNETLKLGS--TLTISNELSQSCGNI 197
Query: 722 EV 723
E+
Sbjct: 198 EI 199
>pdb|3A6M|A Chain A, Crystal Structure Of Grpe From Thermus Thermophilus Hb8
pdb|3A6M|B Chain B, Crystal Structure Of Grpe From Thermus Thermophilus Hb8
Length = 177
Score = 28.9 bits (63), Expect = 9.6, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 205 ELMQQKMKLLEERLQRSDEEIHSYVQLYQESVKEFQDTLHSLKEESKKR 253
E + Q+ + LEERL+ ++EE+ Y + +F + ++EE K R
Sbjct: 15 EAVGQEAQALEERLKAAEEELKGLKDKYLRLLADFDNYRKRMEEELKAR 63
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,773,314
Number of Sequences: 62578
Number of extensions: 799400
Number of successful extensions: 2441
Number of sequences better than 100.0: 58
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 2371
Number of HSP's gapped (non-prelim): 84
length of query: 725
length of database: 14,973,337
effective HSP length: 106
effective length of query: 619
effective length of database: 8,340,069
effective search space: 5162502711
effective search space used: 5162502711
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)