Your job contains 1 sequence.
>004880
MEEVVTLDAESNGTLLISKDMEEEEKKLLEARADEENVEQENVSKNEDHLNDLQFNKLDE
LLTQTQMYAEFLLEKMEDITVNGVEQESEPVGKKKGRGSKRKAAPQCNTRKAKRAVAAML
TRSKEGEKTENENLSEEERVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILA
DQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKK
ERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLL
KELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMK
EELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLIN
KTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCG
KFRLLDRLLARLFARNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQ
DFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVH
VYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIDALEEEDLLALLQDEE
TAEDKMIQTDIGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATGGML
STLNS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004880
(725 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 2386 1.1e-247 1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 774 5.1e-130 3
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 751 4.0e-128 3
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 747 4.0e-128 3
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 747 2.8e-127 3
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 742 4.5e-127 3
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 738 7.3e-127 3
ASPGD|ASPL0000056677 - symbol:AN1024 species:162425 "Emer... 807 4.0e-126 3
UNIPROTKB|F1P3Q4 - symbol:SMARCA1 "Uncharacterized protei... 646 2.2e-123 2
UNIPROTKB|E1C0M8 - symbol:SMARCA5 "Uncharacterized protei... 643 4.2e-121 2
UNIPROTKB|F1N052 - symbol:SMARCA5 "Uncharacterized protei... 637 6.9e-121 2
UNIPROTKB|E2QWV0 - symbol:SMARCA5 "Uncharacterized protei... 637 6.9e-121 2
UNIPROTKB|F1RRG9 - symbol:SMARCA5 "Uncharacterized protei... 637 6.9e-121 2
RGD|1308832 - symbol:Smarca5 "SWI/SNF related, matrix ass... 637 1.1e-120 2
UNIPROTKB|O60264 - symbol:SMARCA5 "SWI/SNF-related matrix... 637 1.1e-120 2
MGI|MGI:1935129 - symbol:Smarca5 "SWI/SNF related, matrix... 634 2.4e-120 2
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 607 8.8e-118 3
CGD|CAL0000801 - symbol:orf19.1720 species:5476 "Candida ... 728 5.7e-117 3
UNIPROTKB|Q5AJ72 - symbol:CaO19.1720 "Putative uncharacte... 728 5.7e-117 3
UNIPROTKB|F6TQG2 - symbol:SMARCA1 "Probable global transc... 1095 6.8e-111 1
UNIPROTKB|P28370 - symbol:SMARCA1 "Probable global transc... 1095 6.8e-111 1
UNIPROTKB|F1RTI9 - symbol:SMARCA1 "Uncharacterized protei... 1095 6.8e-111 1
UNIPROTKB|K7GLQ2 - symbol:SMARCA1 "Uncharacterized protei... 1094 8.7e-111 1
UNIPROTKB|K7GMM0 - symbol:SMARCA1 "Uncharacterized protei... 1094 8.7e-111 1
RGD|1561046 - symbol:Smarca1 "SWI/SNF related, matrix ass... 1089 2.9e-110 1
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 1080 2.6e-109 1
SGD|S000001934 - symbol:IRC5 "Putative ATPase containing ... 686 3.4e-109 2
DICTYBASE|DDB_G0285205 - symbol:snf2a "SNF2-related prote... 1057 2.4e-107 2
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 669 2.4e-107 3
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 668 3.2e-107 3
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 668 3.2e-107 3
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 668 5.3e-107 3
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 666 8.4e-107 3
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 664 1.3e-106 3
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 657 1.9e-106 3
CGD|CAL0005422 - symbol:ISW2 species:5476 "Candida albica... 1053 1.9e-106 1
UNIPROTKB|Q5A310 - symbol:ISW2 "Putative uncharacterized ... 1053 1.9e-106 1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 676 7.7e-106 3
UNIPROTKB|K7GT64 - symbol:LOC100622433 "Uncharacterized p... 1045 1.4e-105 1
UNIPROTKB|D4AA07 - symbol:Smarca4 "Transcription activato... 1045 1.4e-105 1
UNIPROTKB|A7Z019 - symbol:SMARCA4 "Transcription activato... 1045 7.7e-105 1
MGI|MGI:88192 - symbol:Smarca4 "SWI/SNF related, matrix a... 1045 8.0e-105 1
RGD|621728 - symbol:Smarca4 "SWI/SNF related, matrix asso... 1045 8.0e-105 1
UNIPROTKB|E2RJ89 - symbol:SMARCA4 "Uncharacterized protei... 1045 8.0e-105 1
UNIPROTKB|G3V790 - symbol:Smarca4 "SWI/SNF related, matri... 1045 8.0e-105 1
UNIPROTKB|F1M6Y4 - symbol:Smarca4 "Transcription activato... 1045 8.2e-105 1
UNIPROTKB|P51532 - symbol:SMARCA4 "Transcription activato... 1045 9.3e-105 1
UNIPROTKB|Q9HBD4 - symbol:SMARCA4 "SMARCA4 isoform 2" spe... 1045 1.1e-104 1
ZFIN|ZDB-GENE-030605-1 - symbol:smarca4 "SWI/SNF related,... 1044 1.1e-104 1
UNIPROTKB|F1S594 - symbol:LOC100622433 "Uncharacterized p... 1033 2.5e-104 1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 654 3.0e-104 3
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 649 1.5e-103 3
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 1042 1.5e-103 1
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 999 2.2e-103 2
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 646 3.0e-103 3
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 1026 7.4e-103 1
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 1019 7.7e-103 1
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 1018 9.8e-103 1
UNIPROTKB|E1C2F7 - symbol:E1C2F7 "Uncharacterized protein... 1024 1.1e-102 1
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 1020 2.2e-102 1
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 1020 3.1e-102 1
UNIPROTKB|F1MJ46 - symbol:SMARCA4 "Transcription activato... 1021 3.1e-102 1
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 1020 3.1e-102 1
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 1020 3.1e-102 1
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 1020 3.5e-102 1
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 1020 3.5e-102 1
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 1020 3.7e-102 1
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 1020 3.9e-102 1
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 1013 2.2e-101 1
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 644 7.0e-101 3
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 1000 2.8e-100 1
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 623 3.4e-100 3
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 994 3.4e-100 1
FB|FBgn0000212 - symbol:brm "brahma" species:7227 "Drosop... 1001 5.2e-100 1
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 975 9.1e-100 3
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 975 9.1e-100 3
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 619 1.1e-99 3
POMBASE|SPCC1620.14c - symbol:snf22 "ATP-dependent DNA he... 984 3.0e-99 2
WB|WBGene00016868 - symbol:C52B9.8 species:6239 "Caenorha... 975 3.5e-98 1
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 984 4.4e-98 1
TAIR|locus:2062840 - symbol:SYD "SPLAYED" species:3702 "A... 973 4.7e-98 3
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 624 5.4e-96 2
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 624 5.4e-96 2
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 596 5.4e-96 2
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 624 5.4e-96 2
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 624 6.6e-96 3
GENEDB_PFALCIPARUM|PFB0730w - symbol:PFB0730w "DNA helica... 744 7.3e-96 3
UNIPROTKB|O96239 - symbol:PFB0730w "DEAD/DEAH box helicas... 744 7.3e-96 3
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 603 9.6e-96 3
UNIPROTKB|F1N166 - symbol:SMARCA1 "Uncharacterized protei... 648 2.1e-95 3
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 587 6.2e-95 2
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 936 4.8e-94 1
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 936 7.5e-94 2
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 936 9.1e-94 2
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 936 9.1e-94 2
UNIPROTKB|Q9HCK8 - symbol:CHD8 "Chromodomain-helicase-DNA... 936 1.5e-93 2
UNIPROTKB|F6XTU7 - symbol:SMARCA1 "Uncharacterized protei... 641 2.9e-93 2
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 606 4.4e-93 2
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 931 4.7e-93 2
UNIPROTKB|F1S8J5 - symbol:CHD8 "Uncharacterized protein" ... 931 4.9e-93 2
WARNING: Descriptions of 471 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 2386 (845.0 bits), Expect = 1.1e-247, P = 1.1e-247
Identities = 461/678 (67%), Positives = 537/678 (79%)
Query: 49 HLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVX-XXXXXXXXXXAAPQC 107
+LN+ QF KLDELLTQTQ+Y+EFLLEKMEDIT+NG+E ES+ AA Q
Sbjct: 94 NLNETQFTKLDELLTQTQLYSEFLLEKMEDITINGIESESQKAEPEKTGRGRKRKAASQY 153
Query: 108 NTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKSYQLKGVKWL 167
N KAKRAVAAM++RSK V K Q EL LLTGG+LKSYQLKGVKWL
Sbjct: 154 NNTKAKRAVAAMISRSKEDGETINSDLTEEETVIKLQNELCPLLTGGQLKSYQLKGVKWL 213
Query: 168 ISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWVNEISRFV 227
ISLWQNGLNGILADQMGLGKTIQTI FL+HLKGNGL GPYLVIAPLSTLSNW NEI+RF
Sbjct: 214 ISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLDGPYLVIAPLSTLSNWFNEIARFT 273
Query: 228 PSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVD 287
PS++AIIYHG K +RDE+RRKHMP+ +GPKFPIV+TSYEVA++DA++ LRHY WKY+V+D
Sbjct: 274 PSINAIIYHGDKNQRDELRRKHMPKTVGPKFPIVITSYEVAMNDAKRILRHYPWKYVVID 333
Query: 288 EGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSW 347
EGHRLKN KCKLL+ELK++ + NKLLLTGTPLQNNL+ELWSLL+FILPDIF+S +EF+SW
Sbjct: 334 EGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQNNLSELWSLLNFILPDIFTSHDEFESW 393
Query: 348 FDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATM 407
FD S K +E KEE EEKRR Q+V+KLH ILRPF+LRRMK DVE LPRKKEII+YATM
Sbjct: 394 FDFSEKNKNEATKEE-EEKRRAQVVSKLHGILRPFILRRMKCDVELSLPRKKEIIMYATM 452
Query: 408 TEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSC 467
T+HQ+ FQ+HL+N TLE HL E G+G KGKLNNL++QLRKNCNHPDLL+ S
Sbjct: 453 TDHQKKFQEHLVNNTLEAHLGENAIR-GQGWKGKLNNLVIQLRKNCNHPDLLQGQIDGSY 511
Query: 468 FYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRID 527
YPPVE+IV QCGK NHKVL+FSQWTK+LDIM+YYF+EKG+EVCRID
Sbjct: 512 LYPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRID 571
Query: 528 GSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 587
GSV+LDER+RQI+DF+D SS IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM
Sbjct: 572 GSVKLDERRRQIKDFSDEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 631
Query: 588 DRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXX 647
DRCHRIGQTKPVHVYRL+TAQS+E R+LKRA+SKLKLEHVVIG+GQFHQER KS+
Sbjct: 632 DRCHRIGQTKPVHVYRLSTAQSIETRVLKRAYSKLKLEHVVIGQGQFHQERAKSS--TPL 689
Query: 648 XXXXXXXXXXXXXXXXXKMIQTDIGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPG 707
K+IQTDI + DL+R+LDR+DL + + A +P+KGPG
Sbjct: 690 EEEDILALLKEDETAEDKLIQTDISDADLDRLLDRSDLTITAPGETQAAEA--FPVKGPG 747
Query: 708 WEVVIPTATGGMLSTLNS 725
WEVV+P++ GGMLS+LNS
Sbjct: 748 WEVVLPSS-GGMLSSLNS 764
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 774 (277.5 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
Identities = 149/287 (51%), Positives = 208/287 (72%)
Query: 150 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLV 209
L TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKTIQ IA +A + + GP+LV
Sbjct: 227 LFTGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQCIAHIAMMVEKKVLGPFLV 286
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKER-DEIRRKHMPRAIGPKFPIVVTSYEVA 268
+APLSTL NW++E RF P VS ++YHG +KER D +++ + P+VVTS+E+A
Sbjct: 287 VAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDLVKKIRQHQGSLRMCPVVVTSFEIA 346
Query: 269 LSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWS 328
+ D RK+L+ ++W YL+VDEGHR+KN C+L++ELK +P NKLLLTGTPLQNNL+ELWS
Sbjct: 347 MRD-RKFLQRFHWNYLIVDEGHRIKNLNCRLVQELKMLPTDNKLLLTGTPLQNNLSELWS 405
Query: 329 LLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
LL+F+LPD+F L+ F+SWFD+S S+ + + +R ++ LH IL PFLLRR+K
Sbjct: 406 LLNFLLPDVFDDLKSFESWFDIS-TITSDA-ENIVANEREQNILHMLHLILTPFLLRRLK 463
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL-REKVFSA 434
SDV +P KKEI++YA +T Q F ++NKT+ L +EK SA
Sbjct: 464 SDVTLEVPPKKEIVVYAPLTNKQEAFYMAIVNKTIAKLLGQEKDESA 510
Score = 463 (168.0 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
Identities = 105/251 (41%), Positives = 148/251 (58%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSDSCF-YPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+++ L++ CNH L+E + + EQ+VE GK HKV
Sbjct: 575 KLQNILMLLKRCCNHAYLIEYPLDPTTGDFKIDEQLVEASGKFLILDRMLPELKKRGHKV 634
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
L+FSQ T ILDI+ Y +GYE R+DGS+ +R ++ F+ + +FLLSTRAG
Sbjct: 635 LIFSQMTSILDILMDYCYLRGYEYSRLDGSMSYADRDENMKKFSSDPEVF-LFLLSTRAG 693
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLT+ADT I++DSDWNPQ DLQA DRCHRIGQTKPV V+RL TA +++ +IL+RA
Sbjct: 694 GLGINLTSADTVIIFDSDWNPQADLQAQDRCHRIGQTKPVVVHRLITANTIDEKILERAS 753
Query: 620 SKLKLEHVVIGKGQFHQERTK----SNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEED 675
+K KLE +VI K +F + + +C+ + I ++D
Sbjct: 754 AKRKLEKMVIHKNKFKGSKAELKQSKSCLDVDELVELLKSRDYDGAVKGTKGKV-ISDKD 812
Query: 676 LERVLDRADLI 686
L+ +LDR+DL+
Sbjct: 813 LQILLDRSDLM 823
Score = 74 (31.1 bits), Expect = 5.1e-130, Sum P(3) = 5.1e-130
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 3 EVVTLDAESNGTLLISKDMXXXXXXXXXXXXXXXN--VEQENVSKNEDHLNDLQFNKLDE 60
E T++ + ++I+K+M +E+ S+ D +++F +L
Sbjct: 31 EETTMEKSKHEEMVITKEMEEEEKNLEEEGEKKEREMMEEARQSRGNDS-QEMRFKRLQH 89
Query: 61 LLTQTQMYAEFLLEKME 77
LL ++ +Y++FLL KME
Sbjct: 90 LLEKSNIYSKFLLTKME 106
Score = 38 (18.4 bits), Expect = 3.1e-126, Sum P(3) = 3.1e-126
Identities = 8/35 (22%), Positives = 21/35 (60%)
Query: 57 KLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPV 91
K+ +++T+ ++ ++ KME+ V+ E+E +
Sbjct: 149 KIADVMTKEEIMSKAKKPKMEEEAQASVKLEAEDI 183
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 751 (269.4 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 147/328 (44%), Positives = 217/328 (66%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIA 211
TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV
Sbjct: 219 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCG 278
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYEVALS 270
PLSTL NW+ E RF P + ++YHGS++ER + + H + P+V+TS+E+A+
Sbjct: 279 PLSTLPNWMAEFQRFTPEIPTMLYHGSQQERRKLVNHIHKRKGTLQIHPVVITSFEIAMR 338
Query: 271 DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLL 330
D R L+H WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSLL
Sbjct: 339 D-RNVLQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLL 397
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
+F+LPD+F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KSD
Sbjct: 398 NFLLPDVFDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSD 455
Query: 391 VEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL----REKVFSAGRGMKGKLNNLM 446
V +P K+E+++YA +++ Q F ++N+T+ N +E V + G +
Sbjct: 456 VALEVPPKREVVVYAPLSKKQEVFYTAIVNRTITNMFGSSEKETVELSPTGRPKRRTRKS 515
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQ 474
+ K + P+ LE S P V++
Sbjct: 516 IDYSKIDDFPNELEKLISQ--IQPEVDR 541
Score = 475 (172.3 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 108/250 (43%), Positives = 148/250 (59%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSD-SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+M+ LRK CNHP L+E + + E++V GK HKV
Sbjct: 559 KLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKIRGHKV 618
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
L+FSQ T++LDI+ Y + + + R+DGS+ ER++ + FN + IFL+STRAG
Sbjct: 619 LLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYTEREKNMHSFN-TDPDVFIFLVSTRAG 677
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLTAADT I+YDSDWNPQ DLQA DRCHRIGQTKPV VYRL TA +++ +I++RA
Sbjct: 678 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737
Query: 620 SKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMI---QTDIGEEDL 676
+K KLE ++I K F ++ N ++ + I ++DL
Sbjct: 738 AKRKLEKLIIHKNHFKGGQSGLNQSKNFLDPKELMELLKSRDYEREVKGSREKVISDKDL 797
Query: 677 ERVLDRADLI 686
E +LDR+DLI
Sbjct: 798 ELLLDRSDLI 807
Score = 67 (28.6 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 13/40 (32%), Positives = 28/40 (70%)
Query: 38 VEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKME 77
+E+ +S + + + D+++ +L LL ++ +Y++FLL KME
Sbjct: 49 LEKARMSWDRESV-DIRYRRLQHLLEKSNIYSKFLLTKME 87
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 747 (268.0 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 146/328 (44%), Positives = 218/328 (66%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIA 211
TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV
Sbjct: 220 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCG 279
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYEVALS 270
PLSTL NW+ E RF P + ++YHG+++ER + ++ H + P+V+TS+E+A+
Sbjct: 280 PLSTLPNWMAEFQRFTPDIPTMLYHGTQQERRKLVKNIHKRKGTLQIHPVVITSFEIAMR 339
Query: 271 DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLL 330
D R L+H WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSLL
Sbjct: 340 D-RNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLL 398
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
+F+LPD+F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KSD
Sbjct: 399 NFLLPDVFDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSD 456
Query: 391 VEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL----REKVFSAGRGMKGKLNNLM 446
V +P K+E+++YA +++ Q F ++N+T+ N +E V + G +
Sbjct: 457 VALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGCSEKETVELSPTGRPRRRARKS 516
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQ 474
+ K + P+ LE S P V++
Sbjct: 517 INYSKIDDFPNELEKLISQ--MQPEVDR 542
Score = 477 (173.0 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 108/250 (43%), Positives = 148/250 (59%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSD-SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+M+ LRK CNHP L+E + + E++V GK HKV
Sbjct: 560 KLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKARGHKV 619
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
L+FSQ T++LDI+ Y + + + R+DGS+ ER++ + FN + IFL+STRAG
Sbjct: 620 LLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNMHSFN-TDPDVFIFLVSTRAG 678
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLTAADT I+YDSDWNPQ DLQA DRCHRIGQTKPV VYRL TA +++ +I++RA
Sbjct: 679 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 738
Query: 620 SKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMI---QTDIGEEDL 676
+K KLE ++I K F ++ N ++ + I ++DL
Sbjct: 739 AKRKLEKLIIHKNHFKGGQSGLNQSKNFLDPKELMELLKSRDYEREVKGSREKVISDKDL 798
Query: 677 ERVLDRADLI 686
E +LDR+DLI
Sbjct: 799 ELLLDRSDLI 808
Score = 69 (29.3 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 13/40 (32%), Positives = 28/40 (70%)
Query: 38 VEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKME 77
+E+ +S + + + D+++ +L LL ++ +Y++FLL KME
Sbjct: 49 IEKARMSWDRESV-DIRYRRLQHLLEKSNIYSKFLLTKME 87
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 747 (268.0 bits), Expect = 2.8e-127, Sum P(3) = 2.8e-127
Identities = 145/328 (44%), Positives = 218/328 (66%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIA 211
TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV
Sbjct: 219 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCG 278
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYEVALS 270
PLSTL NW+ E RF P + ++YHG+++ER + +R + + P+V+TS+E+A+
Sbjct: 279 PLSTLPNWMAEFKRFTPDIPTMLYHGTQEERQKLVRNIYKRKGTLQIHPVVITSFEIAMR 338
Query: 271 DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLL 330
D R L+H WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSLL
Sbjct: 339 D-RNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLL 397
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
+F+LPD+F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KSD
Sbjct: 398 NFLLPDVFDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSD 455
Query: 391 VEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL----REKVFSAGRGMKGKLNNLM 446
V +P K+E+++YA +++ Q F ++N+T+ N +E + + G +
Sbjct: 456 VALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKS 515
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQ 474
+ K + P+ LE S P V++
Sbjct: 516 INYSKIDDFPNELEKLISQ--IQPEVDR 541
Score = 476 (172.6 bits), Expect = 2.8e-127, Sum P(3) = 2.8e-127
Identities = 109/251 (43%), Positives = 148/251 (58%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSD-SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+M+ LRK CNHP L+E + + E++V GK HKV
Sbjct: 559 KLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKV 618
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
L+FSQ T +LDI+ Y + + + R+DGS+ ER++ + FN + IFL+STRAG
Sbjct: 619 LLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFN-TDPEVFIFLVSTRAG 677
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLTAADT I+YDSDWNPQ DLQA DRCHRIGQTKPV VYRL TA +++ +I++RA
Sbjct: 678 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 737
Query: 620 SKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTD----IGEED 675
+K KLE ++I K F ++ N + + I+ I ++D
Sbjct: 738 AKRKLEKLIIHKNHFKGGQSGLN-LSKNFLDPKELMELLKSRDYEREIKGSREKVISDKD 796
Query: 676 LERVLDRADLI 686
LE +LDR+DLI
Sbjct: 797 LELLLDRSDLI 807
Score = 62 (26.9 bits), Expect = 2.8e-127, Sum P(3) = 2.8e-127
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 38 VEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKME 77
+E+ +S + + ++++ +L LL ++ +Y++FLL KME
Sbjct: 49 LEKARMSWDRES-TEIRYRRLQHLLEKSNIYSKFLLTKME 87
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 742 (266.3 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
Identities = 149/329 (45%), Positives = 218/329 (66%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIA 211
TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV
Sbjct: 197 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCG 256
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK--FPIVVTSYEVAL 269
PLSTL NW+ E RF P + ++YHG+++ER I KH+ G P+V+TS+E+A+
Sbjct: 257 PLSTLPNWMAEFKRFTPEIPTMLYHGTQQER-RILVKHIHERKGTLQIHPVVITSFEIAM 315
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D R L++ WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSL
Sbjct: 316 RD-RTTLQNCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSL 374
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
L+F+LPD+F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KS
Sbjct: 375 LNFLLPDVFDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKS 432
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL----REKVFSAGRGMKGKLNNL 445
DV +P K+E+++YA +++ Q F ++N+T+ N +E V + G +
Sbjct: 433 DVALEVPPKREVVVYAPLSKKQEIFYTAIVNRTIANMFGSSEKETVELSPTGRPKRRTRK 492
Query: 446 MVQLRKNCNHPDLLESAFSDSCFYPPVEQ 474
V K + P+ LE S P V++
Sbjct: 493 SVDYSKIDDFPNELEKLISQ--IQPEVDR 519
Score = 476 (172.6 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
Identities = 107/250 (42%), Positives = 148/250 (59%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSD-SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+M+ LRK CNHP L+E + + E++V GK HKV
Sbjct: 537 KLQNIMMLLRKCCNHPYLIEYPIDPVTQEFKVDEELVTNSGKFLILDRMLPELKTRGHKV 596
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
L+FSQ T++LDI+ Y + + + R+DGS+ ER++ I FN + IFL+STRAG
Sbjct: 597 LLFSQMTRMLDILMDYCHFRNFNFSRLDGSMSYSEREKNIHSFN-TDPDVFIFLVSTRAG 655
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLTAADT I+YDSDWNPQ DLQA DRCHRIGQT+PV VYRL TA +++ +I++RA
Sbjct: 656 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTRPVVVYRLVTANTIDQKIVERAA 715
Query: 620 SKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMI---QTDIGEEDL 676
+K KLE ++I K F ++ N ++ + I ++DL
Sbjct: 716 AKRKLEKLIIHKNHFKGGQSGLNQSKNFLDPKELMELLKSRDYEREVKGSREKVISDKDL 775
Query: 677 ERVLDRADLI 686
E +LDR+DL+
Sbjct: 776 ELLLDRSDLL 785
Score = 65 (27.9 bits), Expect = 4.5e-127, Sum P(3) = 4.5e-127
Identities = 11/26 (42%), Positives = 20/26 (76%)
Query: 52 DLQFNKLDELLTQTQMYAEFLLEKME 77
D+++ +L LL ++ +Y++FLL KME
Sbjct: 41 DIRYRRLQHLLEKSNIYSKFLLTKME 66
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 738 (264.8 bits), Expect = 7.3e-127, Sum P(3) = 7.3e-127
Identities = 135/275 (49%), Positives = 198/275 (72%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIA 211
TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKT+Q IA +A + G+ GP+LV
Sbjct: 202 TGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRGVPGPFLVCG 261
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYEVALS 270
PLSTL NW+ E RF P + ++YHG++++R + ++ H + P+VVTS+E+A+
Sbjct: 262 PLSTLPNWMAEFKRFTPEIPTLLYHGTREDRRKLVKNIHKRQGTLQIHPVVVTSFEIAMR 321
Query: 271 DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLL 330
D + L+H WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSLL
Sbjct: 322 D-QNALQHCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLL 380
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
+F+LPD+F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KSD
Sbjct: 381 NFLLPDVFDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSD 438
Query: 391 VEQMLPRKKEIILYATMTEHQRNFQDHLINKTLEN 425
V +P K+E+++YA + Q F ++N+T+ N
Sbjct: 439 VALEVPPKREVVVYAPLCNKQEIFYTAIVNRTIAN 473
Score = 479 (173.7 bits), Expect = 7.3e-127, Sum P(3) = 7.3e-127
Identities = 115/269 (42%), Positives = 154/269 (57%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSD-SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+M+ LRK CNHP ++E + + E++V GK HKV
Sbjct: 542 KLRNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRGHKV 601
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
LVFSQ T +LDI+ Y + + + R+DGS+ ER++ I FN + +FL+STRAG
Sbjct: 602 LVFSQMTSMLDILMDYCHLRNFIFSRLDGSMSYSEREKNIYSFN-TDPDVFLFLVSTRAG 660
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLTAADT I+YDSDWNPQ DLQA DRCHRIGQTKPV VYRL TA +++ +I++RA
Sbjct: 661 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 720
Query: 620 SKLKLEHVVIGKGQFHQERT---KSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDL 676
+K KLE ++I K F ++ +S + I +EDL
Sbjct: 721 AKRKLEKLIIHKNHFKGGQSGLSQSKNFLDAKELMELLKSRDYEREVKGSREKVISDEDL 780
Query: 677 ERVLDRADLIAGCLDDEEKPNAAVYPLKG 705
E +LDR+DLI D+ K A P+KG
Sbjct: 781 ELLLDRSDLI-----DQMK---ASRPIKG 801
Score = 64 (27.6 bits), Expect = 7.3e-127, Sum P(3) = 7.3e-127
Identities = 13/38 (34%), Positives = 25/38 (65%)
Query: 41 ENVSKNEDHLN-DLQFNKLDELLTQTQMYAEFLLEKME 77
E K+ D + ++++ +L LL ++ +Y++FLL KME
Sbjct: 34 EEAQKSWDRESTEIRYRRLQHLLEKSNIYSKFLLTKME 71
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 807 (289.1 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 144/282 (51%), Positives = 208/282 (73%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVI 210
+TGGK++ YQL+G++WL SLW NGL GILAD+MGLGKT+Q I+ +A K + + GP+L+
Sbjct: 197 VTGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAISLIAFFKEHNVSGPFLIS 256
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAI--GPKFPIVVTSYEVA 268
APLST+SNWV+E +R+ P + ++YHG++ ER ++R+K M P FP+V TSYE+
Sbjct: 257 APLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLRDQKSPDFPVVCTSYEIC 316
Query: 269 LSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWS 328
++D RK+L Y W+Y++VDEGHRLKN C+L+KEL N+LL+TGTPLQNN+ ELWS
Sbjct: 317 MND-RKFLAQYQWRYIIVDEGHRLKNMNCRLIKELLSYNSANRLLITGTPLQNNITELWS 375
Query: 329 LLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
LLHF+LP+IF+ L FQ+WFD S ++ + +E ++R +V+ +H+IL+PFLLRR+K
Sbjct: 376 LLHFLLPEIFNDLNSFQNWFDFSSVLDNNGQTDMIERRKR-TLVSTMHSILKPFLLRRVK 434
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREK 430
+DVE LP+K+E ILYA +T Q++ ++N T +L EK
Sbjct: 435 TDVESALPKKREYILYAPLTLEQKDLYREILNGTGRQYLEEK 476
Score = 416 (151.5 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 92/195 (47%), Positives = 122/195 (62%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVL 500
K+ N ++Q R CN P +++ E +V GK HK+L
Sbjct: 588 KMQNPVMQARLACNSPHNFYWPWAEDPSSID-ETLVTASGKMLLLDRLIPCLLNKGHKIL 646
Query: 501 VFSQWTKILDIMEYYFNE-KGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
+FSQ+ LDI++ + + + CRIDG++ +R+ QI+ FN + Y+IFLLSTRAG
Sbjct: 647 IFSQFKTQLDILQDWATHLRSWNCCRIDGAISQADRQAQIKAFN-TDKDYKIFLLSTRAG 705
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
G GINL AADT IL+DSDWNPQ DLQA DR HRIGQTKPV VYRLAT +VE +L++A
Sbjct: 706 GQGINLVAADTVILFDSDWNPQQDLQAQDRAHRIGQTKPVIVYRLATKGTVEQTLLEKAD 765
Query: 620 SKLKLEHVVIGKGQF 634
SK +LE +VI KG+F
Sbjct: 766 SKRRLERLVIQKGKF 780
Score = 51 (23.0 bits), Expect = 4.0e-126, Sum P(3) = 4.0e-126
Identities = 23/127 (18%), Positives = 46/127 (36%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVXXXXX 96
N Q +NE+ + D++ L LL ++++ + EKM+ +Q+ E
Sbjct: 25 NDGQSEAVENEEDM-DVKTKALMHLLNTSEVFVAIMAEKMK-------KQQEEARLEAAK 76
Query: 97 XXXXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKL 156
Q +T + R +A T + + E++E + G+
Sbjct: 77 KQEQQQKEQQADTSEESRKASAQPTERRGTRASTRQAAAAEATDNNEKKEEPAKSKRGRG 136
Query: 157 KSYQLKG 163
+ KG
Sbjct: 137 RKAPAKG 143
Score = 50 (22.7 bits), Expect = 3.9e-38, Sum P(3) = 3.9e-38
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 360 KEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRK 398
++ LEEK +++AK I RP L+R S P K
Sbjct: 470 RQYLEEKATERLMAKNGMISRPRSLKRSASSSVVSTPNK 508
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 646 (232.5 bits), Expect = 2.2e-123, Sum P(2) = 2.2e-123
Identities = 130/281 (46%), Positives = 194/281 (69%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + GG L+ YQ++G+ W+ISL++NG+NGILAD+MGLGKT+QTIA L +LK +
Sbjct: 97 ESPSYVKGGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIP 156
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVT 263
GP++V+ P STL NW+NE R+VPS+ A+ G K R IR MP G ++ + VT
Sbjct: 157 GPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRDVMMP---G-EWDVCVT 212
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SYE+ + + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL
Sbjct: 213 SYEMVIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNL 271
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELW+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFL
Sbjct: 272 HELWALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFL 319
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
LRR+K++VE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 320 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDID 360
Score = 597 (215.2 bits), Expect = 2.2e-123, Sum P(2) = 2.2e-123
Identities = 132/315 (41%), Positives = 190/315 (60%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LHA+L+PFLLRR+K++VE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 306 KLVERLHAVLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDI---- 361
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y ++ GK
Sbjct: 362 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDTHLITNSGKMLVLDKLL 419
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y +GYE CR+DG +ER+ I FN NSS
Sbjct: 420 AKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTFNAPNSSK 479
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IF+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +
Sbjct: 480 FIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 539
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ ++ SN + +
Sbjct: 540 VEERIVERAEIKLRLDSIVIQQGRLIDQQ--SNKLAKDEMLQMIRHGATHVFASK---DS 594
Query: 670 DIGEEDLERVLDRAD 684
++ EED+ +L+R +
Sbjct: 595 ELTEEDITTILERGE 609
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 643 (231.4 bits), Expect = 4.2e-121, Sum P(2) = 4.2e-121
Identities = 126/280 (45%), Positives = 193/280 (68%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K +
Sbjct: 155 ESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 214
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP++V+ P STL NW+NE R+VP++ A+ G K +R R + + ++ + VTS
Sbjct: 215 GPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVL---LPGEWDVCVTS 271
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
YE+ + + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL
Sbjct: 272 YEMLIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLH 330
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
ELW+LL+F+LPD+F+S E+F SWFD + C L +++ +V +LH +LRPFLL
Sbjct: 331 ELWALLNFLLPDVFNSSEDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLL 378
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
RR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 379 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 418
Score = 582 (209.9 bits), Expect = 4.2e-121, Sum P(2) = 4.2e-121
Identities = 129/313 (41%), Positives = 185/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 364 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 419
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 420 -LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 477
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ SS
Sbjct: 478 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQASINAYNEPGSSK 537
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 538 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 597
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + K ++
Sbjct: 598 VEERIVERAEMKLRLDSIVIQQGRLVDQNLNK---LGKDEMLQMIRHGATHVFASK--ES 652
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 653 EITDEDIDHILER 665
Score = 547 (197.6 bits), Expect = 1.3e-110, Sum P(2) = 1.3e-110
Identities = 120/340 (35%), Positives = 191/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 59 QEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ 118
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V E S + GKL+
Sbjct: 119 NLLSVGDYRHRRTEQEEDEELLTESSKTT-----------NVCTRFEESPSYVKWGKLRD 167
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 168 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 227
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW+NE R+VP++ A+ G K +R R + + ++ + VTSYE+ + + + +
Sbjct: 228 NWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 283
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW+LL+F+LPD+
Sbjct: 284 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDV 343
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S E+F SWFD + + + E L R ++ ++ A
Sbjct: 344 FNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 383
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 637 (229.3 bits), Expect = 6.9e-121, Sum P(2) = 6.9e-121
Identities = 123/277 (44%), Positives = 193/277 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 173 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 232
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ P STL NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+
Sbjct: 233 MVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEM 289
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
+ + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 290 LIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 348
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+LPD+F+S ++F SWFD + C L +++ +V +LH +LRPFLLRR+
Sbjct: 349 SLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLLRRI 396
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 397 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Score = 587 (211.7 bits), Expect = 6.9e-121, Sum P(2) = 6.9e-121
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 379 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 434
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 435 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 492
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 493 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK 552
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 553 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 612
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 613 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 667
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 668 EITDEDIDGILER 680
Score = 539 (194.8 bits), Expect = 2.8e-110, Sum P(2) = 2.8e-110
Identities = 117/340 (34%), Positives = 192/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 74 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ 133
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V + S + GKL+
Sbjct: 134 NLLSVGDYRHRRTEQEEDEELLTESSKAT-----------NVCTRFEDSPSYVKWGKLRD 182
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 183 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 242
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+ + + + +
Sbjct: 243 NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 298
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+LPD+
Sbjct: 299 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV 358
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S ++F SWFD + + + E L R ++ ++ A
Sbjct: 359 FNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 637 (229.3 bits), Expect = 6.9e-121, Sum P(2) = 6.9e-121
Identities = 123/277 (44%), Positives = 193/277 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 173 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 232
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ P STL NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+
Sbjct: 233 MVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEM 289
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
+ + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 290 LIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 348
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+LPD+F+S ++F SWFD + C L +++ +V +LH +LRPFLLRR+
Sbjct: 349 SLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLLRRI 396
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 397 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Score = 587 (211.7 bits), Expect = 6.9e-121, Sum P(2) = 6.9e-121
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 379 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 434
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 435 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 492
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 493 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK 552
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 553 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 612
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 613 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 667
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 668 EITDEDIDGILER 680
Score = 539 (194.8 bits), Expect = 2.8e-110, Sum P(2) = 2.8e-110
Identities = 117/340 (34%), Positives = 192/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 74 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ 133
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V + S + GKL+
Sbjct: 134 NLLSVGDYRHRRTEQEEDEELLTESSKAT-----------NVCTRFEDSPSYVKWGKLRD 182
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 183 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 242
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+ + + + +
Sbjct: 243 NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 298
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+LPD+
Sbjct: 299 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV 358
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S ++F SWFD + + + E L R ++ ++ A
Sbjct: 359 FNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 637 (229.3 bits), Expect = 6.9e-121, Sum P(2) = 6.9e-121
Identities = 123/277 (44%), Positives = 193/277 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 173 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 232
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ P STL NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+
Sbjct: 233 MVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEM 289
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
+ + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 290 LIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 348
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+LPD+F+S ++F SWFD + C L +++ +V +LH +LRPFLLRR+
Sbjct: 349 SLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLLRRI 396
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 397 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Score = 587 (211.7 bits), Expect = 6.9e-121, Sum P(2) = 6.9e-121
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 379 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 434
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 435 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 492
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 493 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTK 552
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 553 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 612
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 613 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 667
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 668 EITDEDIDGILER 680
Score = 539 (194.8 bits), Expect = 2.8e-110, Sum P(2) = 2.8e-110
Identities = 117/340 (34%), Positives = 192/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 74 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ 133
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V + S + GKL+
Sbjct: 134 NLLSVGDYRHRRTEQEEDEELLTESSKAT-----------NVCTRFEDSPSYVKWGKLRD 182
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 183 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 242
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+ + + + +
Sbjct: 243 NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 298
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+LPD+
Sbjct: 299 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV 358
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S ++F SWFD + + + E L R ++ ++ A
Sbjct: 359 FNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 637 (229.3 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 123/277 (44%), Positives = 193/277 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 172 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 231
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ P STL NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+
Sbjct: 232 MVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEM 288
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
+ + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 289 LIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 347
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+LPD+F+S ++F SWFD + C L +++ +V +LH +LRPFLLRR+
Sbjct: 348 SLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLLRRI 395
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 396 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 432
Score = 585 (211.0 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 378 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 433
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 434 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 491
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 492 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK 551
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 552 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 611
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 612 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 666
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 667 EITDEDIDGILER 679
Score = 539 (194.8 bits), Expect = 4.7e-110, Sum P(2) = 4.7e-110
Identities = 117/340 (34%), Positives = 192/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 73 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQ 132
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V + S + GKL+
Sbjct: 133 NLLSVGDYRHRRTEQEEDEELLTESSKAT-----------NVCTRFEDSPSYVKWGKLRD 181
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 182 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 241
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+ + + + +
Sbjct: 242 NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 297
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+LPD+
Sbjct: 298 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV 357
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S ++F SWFD + + + E L R ++ ++ A
Sbjct: 358 FNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 397
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 637 (229.3 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 123/277 (44%), Positives = 193/277 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 173 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 232
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ P STL NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+
Sbjct: 233 MVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEM 289
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
+ + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 290 LIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 348
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+LPD+F+S ++F SWFD + C L +++ +V +LH +LRPFLLRR+
Sbjct: 349 SLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLLRRI 396
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 397 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 433
Score = 585 (211.0 bits), Expect = 1.1e-120, Sum P(2) = 1.1e-120
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 379 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 434
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 435 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 492
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 493 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK 552
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 553 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 612
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 613 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 667
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 668 EITDEDIDGILER 680
Score = 539 (194.8 bits), Expect = 4.7e-110, Sum P(2) = 4.7e-110
Identities = 117/340 (34%), Positives = 192/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 74 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ 133
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V + S + GKL+
Sbjct: 134 NLLSVGDYRHRRTEQEEDEELLTESSKAT-----------NVCTRFEDSPSYVKWGKLRD 182
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 183 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 242
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW++E R+VP++ ++ G K++R R + + ++ + VTSYE+ + + + +
Sbjct: 243 NWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 298
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+LPD+
Sbjct: 299 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV 358
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S ++F SWFD + + + E L R ++ ++ A
Sbjct: 359 FNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 398
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 634 (228.2 bits), Expect = 2.4e-120, Sum P(2) = 2.4e-120
Identities = 122/277 (44%), Positives = 193/277 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 172 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 231
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ P STL NW++E ++VP++ ++ G K++R R + + ++ + VTSYE+
Sbjct: 232 MVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEM 288
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
+ + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW
Sbjct: 289 LIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELW 347
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+LPD+F+S ++F SWFD + C L +++ +V +LH +LRPFLLRR+
Sbjct: 348 SLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLLRRI 395
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 396 KADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 432
Score = 585 (211.0 bits), Expect = 2.4e-120, Sum P(2) = 2.4e-120
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 378 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 433
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 434 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 491
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 492 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK 551
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 552 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 611
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 612 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 666
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 667 EITDEDIDGILER 679
Score = 536 (193.7 bits), Expect = 9.7e-110, Sum P(2) = 9.7e-110
Identities = 116/340 (34%), Positives = 192/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 73 QEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRVKKDEKQ 132
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V + S + GKL+
Sbjct: 133 NLLSVGDYRHRRTEQEEDEELLTESSKAT-----------NVCTRFEDSPSYVKWGKLRD 181
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 182 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 241
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW++E ++VP++ ++ G K++R R + + ++ + VTSYE+ + + + +
Sbjct: 242 NWMSEFKKWVPTLRSVCLIGDKEQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 297
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELWSLL+F+LPD+
Sbjct: 298 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDV 357
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S ++F SWFD + + + E L R ++ ++ A
Sbjct: 358 FNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 397
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 607 (218.7 bits), Expect = 8.8e-118, Sum P(3) = 8.8e-118
Identities = 119/276 (43%), Positives = 188/276 (68%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLV 209
+ G+++ YQ++G+ W+ISL++NG+NGILAD+MGLGKT+QTI+ L +LK GP++V
Sbjct: 123 IKSGEMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIV 182
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYEVA 268
I P STL NWVNE ++ PS+ A+ G + R+ IR MP G ++ + VTSYE+
Sbjct: 183 IVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRDVLMP---G-EWDVCVTSYEMC 238
Query: 269 LSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWS 328
+ + + + +NW+YLV+DE HR+KN K KL + L+ N+LL+TGTPLQNNL ELW+
Sbjct: 239 IRE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWA 297
Query: 329 LLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
LL+F+LPD+F+S E+F WF+ + C + ++ +LHA+L+PFLLRR+K
Sbjct: 298 LLNFLLPDVFNSSEDFDEWFN-TNTCLGD-----------DALITRLHAVLKPFLLRRLK 345
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
++VE+ L KKE+ ++ +++ QR++ ++ K ++
Sbjct: 346 AEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDID 381
Score = 573 (206.8 bits), Expect = 8.8e-118, Sum P(3) = 8.8e-118
Identities = 128/314 (40%), Positives = 188/314 (59%)
Query: 371 MVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREK 430
++ +LHA+L+PFLLRR+K++VE+ L KKE+ ++ +++ QR++ ++ K ++
Sbjct: 328 LITRLHAVLKPFLLRRLKAEVEKRLKPKKEMKIFVGLSKMQRDWYTKVLLKDID-----V 382
Query: 431 VFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXX 490
V AG+ K +L N+++QLRK NHP L + A Y +V GK
Sbjct: 383 VNGAGKVEKMRLQNILMQLRKCTNHPYLFDGA-EPGPPYTTDTHLVYNSGKMAILDKLLP 441
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
+VL+FSQ T++LDI+E Y + + Y CR+DG ++R RQIQ+FN NS+
Sbjct: 442 KLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKF 501
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+F+LSTRAGGLGINL AD I+YDSDWNPQMDLQAMDR HRIGQ K V V+RL T +V
Sbjct: 502 LFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTV 561
Query: 611 EGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTD 670
E +I++RA KL+L+ +VI G+ R SN + +TD
Sbjct: 562 EEKIVERAEVKLRLDKMVIQGGRLVDNR--SNQLNKDEMLNIIRFGANQVFSSK---ETD 616
Query: 671 IGEEDLERVLDRAD 684
I +ED++ +L+R +
Sbjct: 617 ITDEDIDVILERGE 630
Score = 37 (18.1 bits), Expect = 8.8e-118, Sum P(3) = 8.8e-118
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 57 KLDELLTQTQMYAEFLLEKMEDIT 80
+ D LL QT+++ F+ + T
Sbjct: 46 RFDFLLKQTEIFTHFMTNSAKSPT 69
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 728 (261.3 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 147/292 (50%), Positives = 201/292 (68%)
Query: 150 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLV 209
L+TGG+LK YQ+ G++WLI+L+QNGLNGILAD+MGLGKT+Q I+FL+HL NG++GP+LV
Sbjct: 169 LITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIENGINGPFLV 228
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 269
+ P+STLSNW NEI +F P + Y G+K+ER++I I++TSYE+++
Sbjct: 229 VVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDIDLLQQQETTN----IILTSYEISI 284
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D K ++ NWKYL+VDEGHRLKN +C L+K LK + + N+LLLTGTPLQNNL ELWSL
Sbjct: 285 RDFNKLVK-INWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSL 343
Query: 330 LHFILPDIFSSLEEFQSWF------DLSGKCNSEVMKEELEEKR------RGQMVAKLHA 377
L+FILPDIF LE FQ WF +L+G+ +E+ E K + ++ LH
Sbjct: 344 LNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLHT 403
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
IL+PF+LRR+K DV + LP KKE +L+ MT+ Q+ +N L + L E
Sbjct: 404 ILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDAVNDKLFDSLVE 455
Score = 407 (148.3 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 90/200 (45%), Positives = 120/200 (60%)
Query: 441 KLNNL-MVQLRKNCNHPDLLESAFSDSCFYPPVEQ--IVEQCGKXXXXXXXXXXXXXXNH 497
KL NL M+QLR CN P + + YP ++Q ++ K H
Sbjct: 576 KLQNLKMIQLRNICNSPFIYYN-------YPILDQAEVIRNSAKFQVLNQLLPPLLSSGH 628
Query: 498 KVLVFSQWTKILDIMEYYFNEKGY---EVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
KVL+F+Q+TK+LD++E + E ++CR+DGS R QI FN+ N +++FL
Sbjct: 629 KVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFKVFLS 687
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL AADT IL D+DWNPQMDLQA+DR HRIGQ PV ++R S+E +
Sbjct: 688 STRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVL 747
Query: 615 LKRAFSKLKLEHVVIGKGQF 634
+ R+ SK LE +VI GQF
Sbjct: 748 ISRSGSKRFLERLVIQMGQF 767
Score = 52 (23.4 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 10/53 (18%), Positives = 32/53 (60%)
Query: 37 NVEQENVSKNEDHLN-DLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQES 88
+V E + + L+ D + N+L++L+ ++Q+Y++ + + + ++ E+++
Sbjct: 38 DVASEQQQQQFNQLSKDKKMNRLNKLIEKSQIYSQIIADNILQTSLERKEEQN 90
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 728 (261.3 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 147/292 (50%), Positives = 201/292 (68%)
Query: 150 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLV 209
L+TGG+LK YQ+ G++WLI+L+QNGLNGILAD+MGLGKT+Q I+FL+HL NG++GP+LV
Sbjct: 169 LITGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQCISFLSHLIENGINGPFLV 228
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 269
+ P+STLSNW NEI +F P + Y G+K+ER++I I++TSYE+++
Sbjct: 229 VVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQERNDIDLLQQQETTN----IILTSYEISI 284
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D K ++ NWKYL+VDEGHRLKN +C L+K LK + + N+LLLTGTPLQNNL ELWSL
Sbjct: 285 RDFNKLVK-INWKYLIVDEGHRLKNSQCLLIKILKKLNVSNRLLLTGTPLQNNLNELWSL 343
Query: 330 LHFILPDIFSSLEEFQSWF------DLSGKCNSEVMKEELEEKR------RGQMVAKLHA 377
L+FILPDIF LE FQ WF +L+G+ +E+ E K + ++ LH
Sbjct: 344 LNFILPDIFHDLELFQQWFNFDELTELAGELEGTNNEEDEETKNLIKLNIQETLIKNLHT 403
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
IL+PF+LRR+K DV + LP KKE +L+ MT+ Q+ +N L + L E
Sbjct: 404 ILKPFMLRRLKRDVIKNLPPKKEYLLHIPMTKLQKKIYYDAVNDKLFDSLVE 455
Score = 407 (148.3 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 90/200 (45%), Positives = 120/200 (60%)
Query: 441 KLNNL-MVQLRKNCNHPDLLESAFSDSCFYPPVEQ--IVEQCGKXXXXXXXXXXXXXXNH 497
KL NL M+QLR CN P + + YP ++Q ++ K H
Sbjct: 576 KLQNLKMIQLRNICNSPFIYYN-------YPILDQAEVIRNSAKFQVLNQLLPPLLSSGH 628
Query: 498 KVLVFSQWTKILDIMEYYFNEKGY---EVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
KVL+F+Q+TK+LD++E + E ++CR+DGS R QI FN+ N +++FL
Sbjct: 629 KVLIFAQFTKVLDLLEDWLEESPLSHGKICRLDGSTNHQIRDEQISQFNN-NPKFKVFLS 687
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL AADT IL D+DWNPQMDLQA+DR HRIGQ PV ++R S+E +
Sbjct: 688 STRAGGLGINLVAADTVILMDNDWNPQMDLQAIDRVHRIGQINPVKIFRFVIKDSIEEVL 747
Query: 615 LKRAFSKLKLEHVVIGKGQF 634
+ R+ SK LE +VI GQF
Sbjct: 748 ISRSGSKRFLERLVIQMGQF 767
Score = 52 (23.4 bits), Expect = 5.7e-117, Sum P(3) = 5.7e-117
Identities = 10/53 (18%), Positives = 32/53 (60%)
Query: 37 NVEQENVSKNEDHLN-DLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQES 88
+V E + + L+ D + N+L++L+ ++Q+Y++ + + + ++ E+++
Sbjct: 38 DVASEQQQQQFNQLSKDKKMNRLNKLIEKSQIYSQIIADNILQTSLERKEEQN 90
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 242/550 (44%), Positives = 348/550 (63%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 155 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 214
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 215 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 270
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 271 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 329
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 330 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 377
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + S+G+ K +L N++
Sbjct: 378 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMDKMRLLNIL 432
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWT 506
+QLRK CNHP L + A Y E IV GK +VL+FSQ T
Sbjct: 433 MQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMT 491
Query: 507 KILDIMEYYFNEKGYEVCRIDGSVRLDERK-----------RQ-IQDFNDVNSSYRIFLL 554
++LDI+E Y +GYE CR+DG +ER+ R+ I+ FN NSS IF+L
Sbjct: 492 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFML 551
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 552 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 611
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEE 674
++RA KL+L+ +VI +G+ ++ SN + ++++ +E
Sbjct: 612 VERAEIKLRLDSIVIQQGRLIDQQ--SNKLAKEEMLQMIRHGATHVFASK---ESELTDE 666
Query: 675 DLERVLDRAD 684
D+ +L+R +
Sbjct: 667 DITTILERGE 676
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 242/550 (44%), Positives = 348/550 (63%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 176 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 235
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 236 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 291
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 292 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 350
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 351 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 398
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + S+G+ K +L N++
Sbjct: 399 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMDKMRLLNIL 453
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWT 506
+QLRK CNHP L + A Y E IV GK +VL+FSQ T
Sbjct: 454 MQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMT 512
Query: 507 KILDIMEYYFNEKGYEVCRIDGSVRLDERK-----------RQ-IQDFNDVNSSYRIFLL 554
++LDI+E Y +GYE CR+DG +ER+ R+ I+ FN NSS IF+L
Sbjct: 513 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAPNSSKFIFML 572
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 573 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 632
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEE 674
++RA KL+L+ +VI +G+ ++ SN + ++++ +E
Sbjct: 633 VERAEIKLRLDSIVIQQGRLIDQQ--SNKLAKEEMLQMIRHGATHVFASK---ESELTDE 687
Query: 675 DLERVLDRAD 684
D+ +L+R +
Sbjct: 688 DITTILERGE 697
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 1095 (390.5 bits), Expect = 6.8e-111, P = 6.8e-111
Identities = 237/505 (46%), Positives = 333/505 (65%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 294
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 295 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 353
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 354 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 401
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + SAG+ K +L N++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSAGKMDKMRLLNIL 456
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWT 506
+QLRK CNHP L + A Y E IV GK +VL+FSQ T
Sbjct: 457 MQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMT 515
Query: 507 KILDIMEYYFNEKGYEVCRIDGSVRLDER-----------KRQ-IQDFNDVNSSYRIFLL 554
++LDI+E Y +GYE CR+DG +ER +R+ I+ FN NSS IF+L
Sbjct: 516 RLLDILEDYCMWRGYEYCRLDGQTPHEERENGFLQIYFRRRREAIEAFNVPNSSRFIFML 575
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERT 639
++RA KL+L+ +VI +G+ +++
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQS 660
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 237/505 (46%), Positives = 333/505 (65%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 294
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 295 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 353
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 354 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 401
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + SAG+ K +L N++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSAGKMDKMRLLNIL 456
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWT 506
+QLRK CNHP L + A Y E IV GK +VL+FSQ T
Sbjct: 457 MQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMT 515
Query: 507 KILDIMEYYFNEKGYEVCRIDGSVRLDERK-----------RQ-IQDFNDVNSSYRIFLL 554
++LDI+E Y +GYE CR+DG +ER+ R+ I+ FN NSS IF+L
Sbjct: 516 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFML 575
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERT 639
++RA KL+L+ +VI +G+ +++
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQS 660
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 1094 (390.2 bits), Expect = 8.7e-111, P = 8.7e-111
Identities = 237/505 (46%), Positives = 333/505 (65%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 294
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 295 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 353
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 354 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 401
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + SAG+ K +L N++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSAGKMDKMRLLNIL 456
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWT 506
+QLRK CNHP L + A Y E IV GK +VL+FSQ T
Sbjct: 457 MQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQGSRVLIFSQMT 515
Query: 507 KILDIMEYYFNEKGYEVCRIDGSVRLDERK-----------RQ-IQDFNDVNSSYRIFLL 554
++LDI+E Y +GYE CR+DG +ER+ R+ I+ FN NSS IF+L
Sbjct: 516 RLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVELLGQREAIEAFNVPNSSRFIFML 575
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERT 639
++RA KL+L+ +VI +G+ +++
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQS 660
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
Identities = 235/505 (46%), Positives = 330/505 (65%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK GP+
Sbjct: 156 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNFPGPH 215
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 216 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMP---G-EWDVCVTSYE 271
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 272 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 330
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 331 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 378
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++ + S+G+ K +L N++
Sbjct: 379 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMDKMRLLNIL 433
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWT 506
+QLRK CNHP L + A Y E IV GK +VL+FSQ T
Sbjct: 434 MQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVALDKLLARIKEQGSRVLIFSQMT 492
Query: 507 KILDIMEYYFNEKGYEVCRIDGSVRLDERKR------------QIQDFNDVNSSYRIFLL 554
++LDI+E Y +GYE CR+DG +ER+ I+ FN NSS IF+L
Sbjct: 493 RLLDILEDYCMWRGYEYCRLDGQTPHEERENLFLHKHNLFSTEAIEAFNAPNSSKFIFML 552
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 553 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 612
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERT 639
++RA KL+L+ +VI +G+ +++
Sbjct: 613 VERAEIKLRLDSIVIQQGRLIDQQS 637
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 1080 (385.2 bits), Expect = 2.6e-109, P = 2.6e-109
Identities = 228/494 (46%), Positives = 320/494 (64%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPY 207
SLL GG+L+SYQL+G++W++SL+ N NGILAD+MGLGKTIQTIA +A+L + LHGP+
Sbjct: 379 SLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPH 438
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
L++AP + L NW NE + + PS+SA +Y GSK++R EIR R G KF +++T Y++
Sbjct: 439 LILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIRA----RIAGGKFNVLITHYDL 494
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKY-IPIGNKLLLTGTPLQNNLAEL 326
+ D + +L+ +W Y++VDEGHRLKN +C L K L I +LLLTGTP+QN+L EL
Sbjct: 495 IMRD-KAFLKKIDWNYMIVDEGHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQEL 553
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLS-GKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR 385
WSLL+F+LP IF+S+ F+ WF+ +C S + +E EE ++ +LH ++RPFLLR
Sbjct: 554 WSLLNFLLPHIFNSIHNFEEWFNTPFAECGSASLTDE-EELL---IINRLHHVIRPFLLR 609
Query: 386 RMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNL 445
R KS+VE+ LP K ++IL M+ Q+ L K + + R + S G G L NL
Sbjct: 610 RKKSEVEKFLPGKTQVILKCDMSAWQK-----LYYKQVTDVGRVGLHS-GNGKSKSLQNL 663
Query: 446 MVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQW 505
+QLRK CNHP L A + C P +IV GK H++L+FSQ
Sbjct: 664 TMQLRKCCNHPYLFVGADYNMCKKP---EIVRASGKFELLDRLLPKLKKAGHRILLFSQM 720
Query: 506 TKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINL 565
T+++D++E Y + Y R+DGS + D+R ++ FN+ +S Y +FLLSTRAGGLG+NL
Sbjct: 721 TRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNL 780
Query: 566 TAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLE 625
ADT I++DSDWNPQMD QA DR HRIGQ K V V+ L + S+E IL+RA K+ ++
Sbjct: 781 QTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVILERAKQKMGID 840
Query: 626 HVVIGKGQFHQERT 639
VI G F+ T
Sbjct: 841 AKVIQAGLFNTTST 854
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 686 (246.5 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 160/420 (38%), Positives = 239/420 (56%)
Query: 41 ENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPVXXXXXXXXX 100
+ +S+ + L+ KL+E + Q+Q+Y+ + + + + N V +
Sbjct: 116 DELSEMDTKTVSLKLKKLNEFVRQSQVYSSIIADTLLHRS-NEVANAN--TKDNSNSDDE 172
Query: 101 XXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKSYQ 160
++ + T+K +++ + K K+ R L + + LK YQ
Sbjct: 173 EHSSKKRKTKK--KSITDFFKKQKKNEDTTTQNGAPDDAAIKQPRLLKNCI----LKPYQ 226
Query: 161 LKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLSTLSNWV 220
L+G+ WLI+L++NGLNGILAD+MGLGKT+Q+IA LA + GP+LV APLSTL NW+
Sbjct: 227 LEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEMDTKGPFLVTAPLSTLDNWM 286
Query: 221 NEISRFVPSVSAIIYHGSK--KERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRH 278
NE ++F P + + Y+G+ KER + K+ + G IV+TSYE+ L D +
Sbjct: 287 NEFAKFAPDLPVLKYYGTNGYKERSA-KLKNFFKQHGGT-GIVITSYEIILRDT-DLIMS 343
Query: 279 YNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIF 338
NWK+L+VDEGHRLKN C+L+KELK I N+LLLTGTPLQNNLAELWSLL+FI+PDIF
Sbjct: 344 QNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIF 403
Query: 339 SSLEEFQSWFD-----LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV-E 392
+ E F WFD L NSE + + + ++ + +++ LH IL+PFLLRR+K V
Sbjct: 404 ADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLA 463
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLIN----KTLENHLREKVFSAGRGMKGKLNNLMVQ 448
+LP K+E I+ MT Q F +N KT+ L + F+ G ++N ++
Sbjct: 464 NILPPKREYIINCPMTSAQEKFYKAGLNGKLKKTMFKELIKDFFTLNDEYIGHVSNRSIR 523
Score = 413 (150.4 bits), Expect = 3.4e-109, Sum P(2) = 3.4e-109
Identities = 100/248 (40%), Positives = 144/248 (58%)
Query: 399 KEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMK---GKLNNLMVQLRKNCNH 455
++ I Y ++ ++ + D+ IN TL +K++ M+ KL N+M+QLR+
Sbjct: 523 RDFINYK-LSGNETSNTDNKINPTLLQ--MDKLYKKNLQMEISNKKLQNMMMQLRQ---- 575
Query: 456 PDLLESAFSDSCFYPP--------VEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTK 507
+++S F FY P +E +++ GK HKVL++SQ+
Sbjct: 576 --IIDSTF---LFYFPYLHPEDLTLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVN 630
Query: 508 ILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTA 567
+LD++E + + + RIDGSV + RK Q++ FN + IFLLSTRA GLGINL
Sbjct: 631 MLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVG 690
Query: 568 ADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHV 627
ADT +L+DSDWNPQ+DLQAMDRCHRIGQ PV VYRL ++E IL RA +K LE +
Sbjct: 691 ADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERM 750
Query: 628 VIGKGQFH 635
VI G+F+
Sbjct: 751 VIQMGKFN 758
Score = 44 (20.5 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 518 EKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGIN--LTAADTCILYD 575
EK Y+ ++G ++ K I+DF +N Y I +S R+ IN L+ +T D
Sbjct: 483 EKFYKA-GLNGKLKKTMFKELIKDFFTLNDEY-IGHVSNRSIRDFINYKLSGNETSNT-D 539
Query: 576 SDWNPQMDLQAMDRCHR 592
+ NP + LQ MD+ ++
Sbjct: 540 NKINPTL-LQ-MDKLYK 554
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 1057 (377.1 bits), Expect = 2.4e-107, Sum P(2) = 2.4e-107
Identities = 228/500 (45%), Positives = 320/500 (64%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLH 204
E L+TGGKLK YQ+ G++WLISL+ LNGILAD+MGLGKT+QTIAF++ L + +
Sbjct: 614 EQPDLMTGGKLKEYQVTGLEWLISLYTRNLNGILADEMGLGKTVQTIAFISFLYERMNVR 673
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
P+LV+APLST+SNWV+E +R+ P + I+Y G + ER E R +PR F +V+TS
Sbjct: 674 EPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDERRETART-IPRNA---FCVVITS 729
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E + D RK L +W Y+++DEGHR+KN KL +L+ N+LLLTGTPLQN+L
Sbjct: 730 FEYIIKD-RKTLGRVHWIYIIIDEGHRIKNKNSKLSVQLRQYHSRNRLLLTGTPLQNDLG 788
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
ELW+LL+F+LP IF+S + FQ+WF+ + + + EE+ ++ +LH +LR FLL
Sbjct: 789 ELWALLNFLLPTIFNSADTFQNWFNAPFQAKGKNLINVNEEESL-IIINRLHQVLRFFLL 847
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGR-GMKGKL 442
RR+KSDVE LP KKE ++ M+ Q L+ L K +GR MKG
Sbjct: 848 RRLKSDVESQLPDKKEKVIKCNMSALQIAMYRSLVEYGVLPIDPDSKEGRSGRLKMKG-F 906
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVF 502
NN++ QL+K CNHP L F D + E ++ GK H+VL+F
Sbjct: 907 NNIVKQLQKICNHPYL----FKDE--WDINEDLIRTSGKFDTMDQILTKMHASKHRVLIF 960
Query: 503 SQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLG 562
+Q T+++++ME YF+ K + R+DGS + +ER + ++N +S + IF+LST AGGLG
Sbjct: 961 TQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLVVEWNRPDSPFWIFVLSTHAGGLG 1020
Query: 563 INLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKL 622
+NL ADT I++DSDWNPQMDLQA DRCHRIGQT V V+RL +A S+E +IL RA KL
Sbjct: 1021 MNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSVSVFRLISANSIEEKILGRATDKL 1080
Query: 623 KLEHVVIGKGQFHQERTKSN 642
+++ +I G F+ T SN
Sbjct: 1081 EIDAKIIQAGMFN---THSN 1097
Score = 38 (18.4 bits), Expect = 2.4e-107, Sum P(2) = 2.4e-107
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 40 QENVSKNEDHLND 52
+E + +NE+ LND
Sbjct: 545 EEELKQNEEQLND 557
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 669 (240.6 bits), Expect = 2.4e-107, Sum P(3) = 2.4e-107
Identities = 140/323 (43%), Positives = 204/323 (63%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 516 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 575
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IRR + + + F +V+TSY++ +
Sbjct: 576 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVV 635
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 636 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 694
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 695 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 749
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI++Y +T Q+ L NK ++E+ L+ + S + L NL+
Sbjct: 750 DVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLV 809
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 810 MQFRKVCNHPELFERQETWSPFH 832
Score = 395 (144.1 bits), Expect = 2.4e-107, Sum P(3) = 2.4e-107
Identities = 78/171 (45%), Positives = 108/171 (63%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1091 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1150
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF + N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1151 SKISERRDMVADFQNRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1209
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1210 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1260
Score = 68 (29.0 bits), Expect = 2.4e-107, Sum P(3) = 2.4e-107
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 381 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 413
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 668 (240.2 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107
Identities = 140/323 (43%), Positives = 204/323 (63%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 519 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 578
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IRR + + + F +V+TSY++ +
Sbjct: 579 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVV 638
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 639 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 697
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 698 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 752
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI++Y +T Q+ L NK ++E+ L+ + S + L NL+
Sbjct: 753 DVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLV 812
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 813 MQFRKVCNHPELFERQETWSPFH 835
Score = 395 (144.1 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107
Identities = 78/171 (45%), Positives = 108/171 (63%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1095 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1154
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF + N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1155 SKISERRDMVADFQNRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1213
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1214 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1264
Score = 68 (29.0 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 384 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 416
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 668 (240.2 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107
Identities = 140/323 (43%), Positives = 204/323 (63%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 525 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 584
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IRR + + + F +V+TSY++ +
Sbjct: 585 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVV 644
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 645 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 703
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 704 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 758
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI++Y +T Q+ L NK ++E+ L+ + S + L NL+
Sbjct: 759 DVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLV 818
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 819 MQFRKVCNHPELFERQETWSPFH 841
Score = 395 (144.1 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107
Identities = 78/171 (45%), Positives = 108/171 (63%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1101 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1160
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF + N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1161 SKISERRDMVADFQNRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1219
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1220 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1270
Score = 68 (29.0 bits), Expect = 3.2e-107, Sum P(3) = 3.2e-107
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 390 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 422
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 668 (240.2 bits), Expect = 5.3e-107, Sum P(3) = 5.3e-107
Identities = 140/323 (43%), Positives = 204/323 (63%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 525 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 584
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IRR + + + F +V+TSY++ +
Sbjct: 585 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVV 644
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 645 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 703
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 704 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 758
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI++Y +T Q+ L NK ++E+ L+ + S + L NL+
Sbjct: 759 DVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQTTTSSLMNLV 818
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 819 MQFRKVCNHPELFERQETWSPFH 841
Score = 393 (143.4 bits), Expect = 5.3e-107, Sum P(3) = 5.3e-107
Identities = 78/171 (45%), Positives = 107/171 (62%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1101 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1160
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1161 SKISERRDMVADFQTRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1219
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1220 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1270
Score = 68 (29.0 bits), Expect = 5.3e-107, Sum P(3) = 5.3e-107
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 390 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 422
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 666 (239.5 bits), Expect = 8.4e-107, Sum P(3) = 8.4e-107
Identities = 140/323 (43%), Positives = 203/323 (62%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 518 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 577
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IRR + + + F +V+TSY++ +
Sbjct: 578 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVV 637
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 638 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 696
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 697 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 751
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI+ Y +T Q+ L NK ++E+ L+ + S + L NL+
Sbjct: 752 DVENELSDKIEILTYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLV 811
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 812 MQFRKVCNHPELFERQETWSPFH 834
Score = 393 (143.4 bits), Expect = 8.4e-107, Sum P(3) = 8.4e-107
Identities = 78/171 (45%), Positives = 107/171 (62%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1094 PGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1153
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1154 SKISERRDMVADFQTRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1212
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1213 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1263
Score = 68 (29.0 bits), Expect = 8.4e-107, Sum P(3) = 8.4e-107
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 383 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 415
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 664 (238.8 bits), Expect = 1.3e-106, Sum P(3) = 1.3e-106
Identities = 139/320 (43%), Positives = 203/320 (63%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 518 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 577
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
STL+NW E +RFVP + Y G+ +R ++K + P F +V+TSY++ + D
Sbjct: 578 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRK--KKKTLYTQDAP-FHVVITSYQLVVQDV 634
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+LLHF
Sbjct: 635 -KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHF 693
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
I+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K DVE
Sbjct: 694 IMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKKDVE 748
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLMVQL 449
L K EI++Y +T Q+ L NK ++E+ L+ + S + L NL++Q
Sbjct: 749 NELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQF 808
Query: 450 RKNCNHPDLLESAFSDSCFY 469
RK CNHP+L E + S F+
Sbjct: 809 RKVCNHPELFERQETWSPFH 828
Score = 393 (143.4 bits), Expect = 1.3e-106, Sum P(3) = 1.3e-106
Identities = 78/171 (45%), Positives = 107/171 (62%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1088 PGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1147
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1148 SKISERRDMVADFQTRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1206
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1207 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1257
Score = 68 (29.0 bits), Expect = 1.3e-106, Sum P(3) = 1.3e-106
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 383 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 415
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 657 (236.3 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 137/323 (42%), Positives = 203/323 (62%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 521 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 580
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IR+ + + + F +V+TSY++ +
Sbjct: 581 ASTLNNWHQEFARFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQDAPFHVVITSYQLVV 640
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 641 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 699
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 700 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 754
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI++Y T Q+ L NK ++++ L+ + + + L NL+
Sbjct: 755 DVENELSDKIEILMYCQQTSRQKLLYQALKNKISIDDLLQSSMGTTQQAQTTTSSLMNLV 814
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 815 MQFRKVCNHPELFERQETWSPFH 837
Score = 396 (144.5 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 78/171 (45%), Positives = 108/171 (63%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1099 PDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1158
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF + N + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1159 SKISERRDMVADFQNRNDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1217
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1218 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1268
Score = 71 (30.1 bits), Expect = 1.9e-106, Sum P(3) = 1.9e-106
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K DI +G+++E
Sbjct: 386 QQRKLNFLITQTELYAHFMSRK-RDIGHDGIQEE 418
Score = 48 (22.0 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
Identities = 27/124 (21%), Positives = 53/124 (42%)
Query: 338 FSSLEEFQSWF------DLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV 391
FS L++ + W D S +S ++ +E+ +LH +LR L + K
Sbjct: 119 FSKLKKSRKWLKSILLSDDSSDTDSPSDEDGEDEEEFSLSREELHNMLR---LHKYKKLH 175
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL---REKVFSAGRGMKGKLNNLMVQ 448
+ + KE+ Y + + D + + HL ++K F + +KGKL + +
Sbjct: 176 QSKYSKDKELQQYQYYSAGLLSTYDPYYEQ--QRHLLGPKKKKFKEEKKLKGKLKKVKKK 233
Query: 449 LRKN 452
R++
Sbjct: 234 RRRD 237
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 229/543 (42%), Positives = 333/543 (61%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + GKL+ YQ++G+ WLISL++N L+GILAD+MGLGKT+QTI+FL +L+ +
Sbjct: 129 ESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKHID 188
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP++VI P STL NW E +++ P V+ ++ G K++R I + + A KF +++TS
Sbjct: 189 GPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTA---KFDVLITS 245
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + + L+ + W+Y+VVDE HR+KN L K ++ N+LL+TGTPLQNNL
Sbjct: 246 FEMILRE-KSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLH 304
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
ELW+LL+F+LPD+F ++F FD NSE + EE +++R+ + V++LH +L PFLL
Sbjct: 305 ELWALLNFLLPDVFGDSDQFDEAFDNQ---NSEELDEEEKQRRQDKAVSELHQLLSPFLL 361
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K+DVE+ L K E +Y MT+ Q + L+ K ++ V G K +L N
Sbjct: 362 RRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDID--AVNGVVGKREG-KTRLLN 418
Query: 445 LMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQ 504
+++QLRK CNHP L + A Y E +V GK +VL+FSQ
Sbjct: 419 IVMQLRKCCNHPYLFDGA-EPGPPYTTDEHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQ 477
Query: 505 WTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGIN 564
+++LDI+E Y + YE CRIDGS ++R I ++N +S IFLL+TRAGGLGIN
Sbjct: 478 MSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGIN 537
Query: 565 LTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKL 624
LT+AD ILYDSDWNPQ DLQAMDR HRIGQ K V V+R T +++E ++L+RA KL+L
Sbjct: 538 LTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRL 597
Query: 625 EHVVIGKG-QFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDLERVLDR- 682
+ +VI +G Q + N M+ D+ EE L+R ++
Sbjct: 598 DQLVIQQGRQMNSNNNVGNSKDDLIGMIQHGAKEVFENSKGTMLDDDV-EEILKRGAEKT 656
Query: 683 ADL 685
A+L
Sbjct: 657 AEL 659
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 1053 (375.7 bits), Expect = 1.9e-106, P = 1.9e-106
Identities = 229/543 (42%), Positives = 333/543 (61%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + GKL+ YQ++G+ WLISL++N L+GILAD+MGLGKT+QTI+FL +L+ +
Sbjct: 129 ESPSYIKEGKLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKHID 188
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP++VI P STL NW E +++ P V+ ++ G K++R I + + A KF +++TS
Sbjct: 189 GPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKDQLYTA---KFDVLITS 245
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + + L+ + W+Y+VVDE HR+KN L K ++ N+LL+TGTPLQNNL
Sbjct: 246 FEMILRE-KSALQKFRWEYIVVDEAHRIKNEDSSLSKIIRLFYSRNRLLITGTPLQNNLH 304
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
ELW+LL+F+LPD+F ++F FD NSE + EE +++R+ + V++LH +L PFLL
Sbjct: 305 ELWALLNFLLPDVFGDSDQFDEAFDNQ---NSEELDEEEKQRRQDKAVSELHQLLSPFLL 361
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K+DVE+ L K E +Y MT+ Q + L+ K ++ V G K +L N
Sbjct: 362 RRVKADVEKSLLPKIETNVYIGMTDMQVEWYKRLLEKDID--AVNGVVGKREG-KTRLLN 418
Query: 445 LMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQ 504
+++QLRK CNHP L + A Y E +V GK +VL+FSQ
Sbjct: 419 IVMQLRKCCNHPYLFDGA-EPGPPYTTDEHLVYNSGKMIILDKMLKKFKAEGSRVLIFSQ 477
Query: 505 WTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGIN 564
+++LDI+E Y + YE CRIDGS ++R I ++N +S IFLL+TRAGGLGIN
Sbjct: 478 MSRVLDILEDYCYFRDYEYCRIDGSTSHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGIN 537
Query: 565 LTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKL 624
LT+AD ILYDSDWNPQ DLQAMDR HRIGQ K V V+R T +++E ++L+RA KL+L
Sbjct: 538 LTSADIVILYDSDWNPQADLQAMDRAHRIGQKKQVKVFRFVTEKAIEEKVLERAAQKLRL 597
Query: 625 EHVVIGKG-QFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDLERVLDR- 682
+ +VI +G Q + N M+ D+ EE L+R ++
Sbjct: 598 DQLVIQQGRQMNSNNNVGNSKDDLIGMIQHGAKEVFENSKGTMLDDDV-EEILKRGAEKT 656
Query: 683 ADL 685
A+L
Sbjct: 657 AEL 659
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 676 (243.0 bits), Expect = 7.7e-106, Sum P(3) = 7.7e-106
Identities = 143/330 (43%), Positives = 204/330 (61%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 517 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 576
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAI---GPKFPIVVTSYEVAL 269
STL+NW E SRFVP + Y G+ +R IR+ + + F +V+TSY++ +
Sbjct: 577 ASTLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIRKFWSQKTLYTQNAPFHVVITSYQLVV 636
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 637 QDV-KYFQRVKWQYMVLDEAQALKSSTSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 695
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 696 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 750
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA--GRGMKGKLNNLM 446
DVE L K EI+ Y +T QR L NK ++E+ L+ + SA L NL+
Sbjct: 751 DVENELSDKIEILTYCQLTSRQRLLYQALKNKISIEDLLQSSMGSAQQAHSTTSSLMNLV 810
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPPVEQIV 476
+Q RK CNHPDL E S F+ ++ +
Sbjct: 811 MQFRKVCNHPDLFERQEIRSPFHMSLKPFI 840
Score = 389 (142.0 bits), Expect = 7.7e-106, Sum P(3) = 7.7e-106
Identities = 77/171 (45%), Positives = 106/171 (61%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P E ++ GK H+VL++SQ T+++D++E Y + + R+DGS
Sbjct: 1122 PDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGS 1181
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ ER+ + DF + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1182 SKISERRDMVADFQSRTDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDR 1240
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1241 AHRLGQTKQVTVYRLICKGTIEERILQRAKEKSEIQRMVISGGNFKPDTLK 1291
Score = 53 (23.7 bits), Expect = 7.7e-106, Sum P(3) = 7.7e-106
Identities = 10/19 (52%), Positives = 15/19 (78%)
Query: 54 QFNKLDELLTQTQMYAEFL 72
Q KL+ L+TQT++YA F+
Sbjct: 382 QQRKLNFLITQTELYAHFM 400
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 74 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 129
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 130 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 185
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 186 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 243
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 244 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 301
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 302 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 360
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 361 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 420
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 421 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 480
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 481 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 540
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 541 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 570
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 540 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 595
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 596 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 651
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 652 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 709
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 710 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 767
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 768 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 826
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 827 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 886
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 887 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 946
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 947 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1006
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1007 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1036
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 1045 (372.9 bits), Expect = 7.7e-105, P = 7.7e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 733 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 788
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 789 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 844
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 845 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 902
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 903 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 960
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 961 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1019
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1020 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1079
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1080 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1139
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1140 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1199
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1200 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1229
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 1045 (372.9 bits), Expect = 8.0e-105, P = 8.0e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 1045 (372.9 bits), Expect = 8.0e-105, P = 8.0e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 1045 (372.9 bits), Expect = 8.0e-105, P = 8.0e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 1045 (372.9 bits), Expect = 8.0e-105, P = 8.0e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 1045 (372.9 bits), Expect = 8.2e-105, P = 8.2e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 1045 (372.9 bits), Expect = 9.3e-105, P = 9.3e-105
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 1045 (372.9 bits), Expect = 1.1e-104, P = 1.1e-104
Identities = 229/510 (44%), Positives = 310/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 741 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 796
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 797 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 852
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 853 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 910
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 911 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 968
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 969 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1027
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1028 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1087
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S
Sbjct: 1088 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGS 1147
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1148 EYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1207
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1208 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 1044 (372.6 bits), Expect = 1.1e-104, P = 1.1e-104
Identities = 228/500 (45%), Positives = 307/500 (61%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPY 207
SLL G+LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L + L+GP+
Sbjct: 759 SLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRLNGPF 818
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
L+I PLSTLSNWV E ++ PSV + Y GS R R +P KF ++VT+YE
Sbjct: 819 LIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR----RAFLPILRSGKFNVLVTTYEY 874
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLTGTPLQNNLAE 325
+ D ++ L WKY++VDEGHR+KN CKL + L Y+ ++LLTGTPLQN L E
Sbjct: 875 IIKD-KQVLAKLRWKYMIVDEGHRMKNHHCKLTQVLNTHYLA-PRRVLLTGTPLQNKLPE 932
Query: 326 LWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR 385
LW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +LH +LRPFLLR
Sbjct: 933 LWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRLHKVLRPFLLR 990
Query: 386 RMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMKGKLNN 444
R+K +VE LP K E ++ M+ QR H+ K L EK G+G L N
Sbjct: 991 RLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KKGKGGTKTLMN 1049
Query: 445 LMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXXXXXXXXXXNH 497
++QLRK CNHP + +E +FS+ F + Q + GK NH
Sbjct: 1050 TIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGSDLYRASGKFELLDRILPKLRATNH 1109
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
KVL+F Q T ++ IME YF + ++ R+DG+ + ++R +++FND + Y IFLLSTR
Sbjct: 1110 KVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLLKNFNDPSHQYFIFLLSTR 1169
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T SVE +IL
Sbjct: 1170 AGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAA 1229
Query: 618 AFSKLKLEHVVIGKGQFHQE 637
A KL ++ VI G F Q+
Sbjct: 1230 AKYKLNVDQKVIQAGMFDQK 1249
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 1033 (368.7 bits), Expect = 2.5e-104, P = 2.5e-104
Identities = 224/498 (44%), Positives = 303/498 (60%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLV 209
+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L + ++GP+L+
Sbjct: 1 MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI 60
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 269
I PLSTLSNW E ++ PSV + Y GS R R +P+ KF +++T+YE +
Sbjct: 61 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGKFNVLLTTYEYII 116
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLTGTPLQNNLAELW 327
D + L WKY++VDEGHR+KN CKL + L Y+ +LLLTGTPLQN L ELW
Sbjct: 117 KD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLTGTPLQNKLPELW 174
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
+LL+F+LP IF S F+ WF+ E K +L E+ ++ +LH +LRPFLLRR+
Sbjct: 175 ALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRLHKVLRPFLLRRL 232
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMKGKLNNLM 446
K +VE LP K E ++ M+ QR H+ K L EK G+G L N +
Sbjct: 233 KKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KKGKGGTKTLMNTI 291
Query: 447 VQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXXXXXXXXXXNHKV 499
+QLRK CNHP + +E +FS+ F + Q + GK NHKV
Sbjct: 292 MQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKV 351
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
L+F Q T ++ IME YF +G++ R+DG+ + ++R ++ FN+ S Y IFLLSTRAG
Sbjct: 352 LLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAG 411
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T SVE +IL A
Sbjct: 412 GLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAK 471
Query: 620 SKLKLEHVVIGKGQFHQE 637
KL ++ VI G F Q+
Sbjct: 472 YKLNVDQKVIQAGMFDQK 489
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 654 (235.3 bits), Expect = 3.0e-104, Sum P(3) = 3.0e-104
Identities = 141/327 (43%), Positives = 204/327 (62%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPY 207
++LT KLK YQLKG+ WL++L++ G+NGILAD+MGLGKTIQ+I+ +A+L + + + GP+
Sbjct: 792 TMLTA-KLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPF 850
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIR----RKHMPRAIGPKFPIVVT 263
LVIAP STL NW EI++FVP++ + Y G+ K+R +R RKH+ +F ++VT
Sbjct: 851 LVIAPASTLHNWQQEITKFVPNIKVLPYWGNAKDRKILRKFWDRKHITYTKESEFHVLVT 910
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY++ + DA+ Y + W+Y+++DE +K+ + K L N+LLLTGTP+QNN+
Sbjct: 911 SYQLVVLDAQ-YFQKVKWQYMILDEAQAIKSSQSSRWKSLLGFHCRNRLLLTGTPIQNNM 969
Query: 324 AELWSLLHFILPDIFSSLEEFQSWF--DLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
ELW+LLHFI+P +F S +EF WF D+ S E ++ RR LH IL+P
Sbjct: 970 QELWALLHFIMPTLFDSHDEFSEWFSKDIESHAQSNTKLNE-DQLRR------LHMILKP 1022
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
F+LRR+K V+Q L K E ++ +T QR +L N+ L EK
Sbjct: 1023 FMLRRVKKHVQQELGDKVEKDVFCDLTYRQRALYTNLRNRVSIMDLIEKAAVGDETDSTT 1082
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCF 468
L NL++Q RK CNHPDL E A + S F
Sbjct: 1083 LMNLVMQFRKVCNHPDLFERAETKSPF 1109
Score = 401 (146.2 bits), Expect = 3.0e-104, Sum P(3) = 3.0e-104
Identities = 78/163 (47%), Positives = 105/163 (64%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P + + V GK H+VL++ Q T+++D+ME Y + Y+ CR+DGS
Sbjct: 1311 PSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLDGS 1370
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
+L++R+ + DF + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1371 TKLEDRRDTVADFQQRPDIF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDR 1429
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKG 632
HR+GQT+ V VYRL T ++E RI KRA K +++ VVI G
Sbjct: 1430 AHRLGQTRQVTVYRLITRSTIEERIRKRALQKEEVQRVVISGG 1472
Score = 49 (22.3 bits), Expect = 3.0e-104, Sum P(3) = 3.0e-104
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 39 EQENVSKNE-DHLNDLQFNKLDELLTQTQMYAEFLLEKM 76
E E+ + E + + Q KL+ L++QT++Y+ F+ K+
Sbjct: 655 ELESAKRAEAEREANRQKRKLNFLISQTELYSHFIGRKI 693
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 649 (233.5 bits), Expect = 1.5e-103, Sum P(3) = 1.5e-103
Identities = 136/328 (41%), Positives = 200/328 (60%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPLS 214
LK YQLKG+ W+++L+ G+NGILAD+MGLGKTIQ+IA LAHL + + GP+L++ P S
Sbjct: 1162 LKPYQLKGMTWIVNLYDQGINGILADEMGLGKTIQSIAVLAHLAEEKNIWGPFLIVTPKS 1221
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAI---GPKFPIVVTSYEVALSD 271
TL NW NE ++FVP+ I Y G++++R IR+ P+ + F +++TSY V + D
Sbjct: 1222 TLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKYWNPKKLYHRNSPFHVLITSYNVIVRD 1281
Query: 272 ARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLH 331
KY W+Y+V+DE H +K+ K L N+LLLTGTP+QN++AELW+LLH
Sbjct: 1282 -EKYFHRLRWQYMVLDEAHAIKSSASNRWKTLMSFNCRNRLLLTGTPIQNSMAELWALLH 1340
Query: 332 FILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV 391
FI+P F S +EF WF + N + + L E + + +LH IL+PF+LRR+K DV
Sbjct: 1341 FIMPTFFDSHDEFAEWFSKDIE-NHAMSQGGLNEHQ----LNRLHMILKPFMLRRIKRDV 1395
Query: 392 EQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLR 450
E +P K E+ +Y +T Q+ +Q N ++ L FS MK L N ++Q R
Sbjct: 1396 ENEMPSKTEVEVYCNLTHRQKKLYQSIRSNISITELLGGASFSEQGSMKA-LMNFVMQFR 1454
Query: 451 KNCNHPDLLESAFSDSCFYPPVEQIVEQ 478
K CNHP+ + + +S F V+ + Q
Sbjct: 1455 KVCNHPETFKRSECESPFLFQVQTMEPQ 1482
Score = 383 (139.9 bits), Expect = 1.5e-103, Sum P(3) = 1.5e-103
Identities = 77/171 (45%), Positives = 110/171 (64%)
Query: 464 SDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEV 523
S S + P + + GK H+VL++SQ+TK+++I+E + + Y+
Sbjct: 1751 STSIWMPSFSKSLNDSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKY 1810
Query: 524 CRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMD 583
R+DGS +LD+R+ + DF S + FLLSTRA G+GINLT+ADT I YDSDWNP +D
Sbjct: 1811 LRLDGSSKLDDRRDMVDDFQSDPSIFA-FLLSTRACGIGINLTSADTVIFYDSDWNPTVD 1869
Query: 584 LQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
QA DR HR+GQT+PV VYRL T ++E +ILKRA K +++ +VI G+F
Sbjct: 1870 EQAQDRAHRLGQTRPVTVYRLITKNTIEEKILKRAKQKHQIQSIVIAGGKF 1920
Score = 72 (30.4 bits), Expect = 1.5e-103, Sum P(3) = 1.5e-103
Identities = 14/42 (33%), Positives = 28/42 (66%)
Query: 39 EQENVSKNEDHLNDL--QFNKLDELLTQTQMYAEFLLEKMED 78
E+ N K E+ + + Q KL+ L++QT++Y+ F+ +K++D
Sbjct: 972 EEANQRKREEEVQEAKRQQRKLNFLISQTELYSHFMSKKLDD 1013
Score = 42 (19.8 bits), Expect = 2.1e-100, Sum P(3) = 2.1e-100
Identities = 10/50 (20%), Positives = 22/50 (44%)
Query: 42 NVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPV 91
N + N + L +L FN D + +E +E+ + + + +P+
Sbjct: 620 NYNNNNNMLKNLDFNSNDHSKLDNILLSEKSIERHRNPLSSSISSAPKPL 669
Score = 40 (19.1 bits), Expect = 1.9e-30, Sum P(2) = 1.9e-30
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 46 NEDHLNDLQFNKLDELLTQTQMY 68
NED LN+ FN D ++ + Y
Sbjct: 1625 NEDRLNNGLFNVKDLVIGGNERY 1647
Score = 39 (18.8 bits), Expect = 4.3e-33, Sum P(3) = 4.3e-33
Identities = 16/52 (30%), Positives = 24/52 (46%)
Query: 339 SSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
SS EE + D GK E K+E EE+ + + + K + LL+ D
Sbjct: 1052 SSSEEEEESSDDEGKTEQE--KKE-EEELKSEALKKTQKAIELQLLKTKTFD 1100
Score = 37 (18.1 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 41 ENVSKNEDHLNDLQFNKLDELL 62
EN + ++ LN+ Q N+L +L
Sbjct: 1362 ENHAMSQGGLNEHQLNRLHMIL 1383
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 1042 (371.9 bits), Expect = 1.5e-103, P = 1.5e-103
Identities = 229/504 (45%), Positives = 310/504 (61%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNG 202
E +LL GGKLK YQ++G++W++SL+ N LNGILAD+MGLGKTIQTIA +++L K N
Sbjct: 1701 EQPALLEGGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKKN- 1759
Query: 203 LHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP-KFPIV 261
+GP+LV+ PLSTLSNW E S++ P V ++Y+G K R + I P +F V
Sbjct: 1760 -NGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPAR----KSKFEEFIAPGQFNAV 1814
Query: 262 VTSYEVALSDARKYLRHYNWKYLVVDEGHRLKN--PKCKLLKELKYIPIGNKLLLTGTPL 319
VT+YE + D + L W YL+VDEGHR+KN K ++ Y +LLLTGTPL
Sbjct: 1815 VTTYEYIIKD-KNALSKIKWNYLIVDEGHRMKNYTSKLSIILGTSYSS-RYRLLLTGTPL 1872
Query: 320 QNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAIL 379
QN+L ELW+LL+F+LP IF +E+F+ WF+ E K E+ E+ + ++ +LH +L
Sbjct: 1873 QNSLPELWALLNFLLPTIFDCVEDFEQWFNAPFAQTGE--KIEMNEEEQLLIIQRLHKVL 1930
Query: 380 RPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMK 439
RPFLLRR+K +VE LP K E +L M+ Q D + K + L + G
Sbjct: 1931 RPFLLRRLKKEVEAQLPDKVEKVLKCDMSAFQAKMYDLIKTKGVSK-LASSGGADGNPKL 1989
Query: 440 GK-LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHK 498
K L N VQLRK CNHP L + D Y + ++ GK H+
Sbjct: 1990 AKGLKNTYVQLRKICNHPYLF---YDDE--YNIDDNLIRYAGKFDLLDRLLPKLKAAGHR 2044
Query: 499 VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRA 558
VL+FSQ T++++I+E +F K Y+ R+DGS + DER ++ FN NS Y IF+LSTRA
Sbjct: 2045 VLIFSQMTQLINILEVFFAYKDYKFLRLDGSTKSDERGHLLELFNAPNSEYFIFVLSTRA 2104
Query: 559 GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRA 618
GGLG+NL ADT I++DSDWNPQMDLQA DR HRIGQ + V V RL TA SVE IL RA
Sbjct: 2105 GGLGLNLQTADTVIIFDSDWNPQMDLQAQDRAHRIGQKQTVRVLRLVTAHSVEESILARA 2164
Query: 619 FSKLKLEHVVIGKGQFHQERTKSN 642
K +L+ +I GQF+ + +S+
Sbjct: 2165 NFKKELDKKIIQAGQFNNKSNRSD 2188
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 999 (356.7 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 216/506 (42%), Positives = 312/506 (61%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
R+ ++ E ++L GGKLK YQ+KG++W++SL+ N LNGILAD+MGLGKTIQ+I+ + +L
Sbjct: 484 RIKEKITEQPTILVGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTYL 543
Query: 199 KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKF 258
+L+I PLST++NW E ++ PS+ I+Y GS+++R R P F
Sbjct: 544 IEKKHENKFLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQR----RSLQPDIRYGNF 599
Query: 259 PIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTGT 317
+++T+YE + + R L +++ ++++DEGHR+KN + KL + L+ Y N+L+LTGT
Sbjct: 600 QVLLTTYEYVIRE-RPMLAKFHYSHMIIDEGHRMKNAQSKLSQTLRTYYKTKNRLILTGT 658
Query: 318 PLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
PLQNNL ELW+LL+F+LP IF+S++ F WF+ K EL E+ ++ +LH
Sbjct: 659 PLQNNLPELWALLNFVLPGIFNSVKSFDDWFNTPFANTGAQEKIELTEEESLLVIRRLHK 718
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLREKVFSAGR 436
+LRPFLLRR+K DVE+ LP K E +L ++ Q +Q L + L + V A
Sbjct: 719 VLRPFLLRRLKKDVEKDLPDKVEKVLKCNLSGLQYVLYQQMLKHNAL--FVGADVGGAKS 776
Query: 437 GMKGKLNNLMVQLRKNCNHP---DLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXX 493
G+KG LNN ++QLRK CNHP + +ES + S + I GK
Sbjct: 777 GIKG-LNNKIMQLRKICNHPFVFEEVESVLNSSRLTNDL--IWRVSGKFELLDRVLPKFK 833
Query: 494 XXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+VL+F Q T+I+DIME + K + R+DGS + +ER+ ++ FN +S Y FL
Sbjct: 834 KSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDMLKVFNAPDSDYFCFL 893
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
LSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T SVE
Sbjct: 894 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITNDSVEEV 953
Query: 614 ILKRAFSKLKLEHVVIGKGQFHQERT 639
IL+RA KL ++ VI G+F + T
Sbjct: 954 ILERAHQKLDIDGKVIQAGKFDNKST 979
Score = 45 (20.9 bits), Expect = 2.2e-103, Sum P(2) = 2.2e-103
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 43 VSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMED 78
V KN++ LN+L L ++ EF EK ED
Sbjct: 40 VPKNKEELNELLSKYYKLLFDSNKLKKEF--EKSED 73
Score = 38 (18.4 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 50 LNDLQFNKLDELLTQTQMYAEFLLEKM 76
L+ + +++ LL QT + + L EK+
Sbjct: 412 LDKTKDHRITHLLKQTNQFLDSLTEKV 438
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 646 (232.5 bits), Expect = 3.0e-103, Sum P(3) = 3.0e-103
Identities = 138/325 (42%), Positives = 203/325 (62%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAP 212
G LK YQ+KG+ WL +++ G++GILAD+MGLGKT+Q+IAFL H+ + G+ GP+LVI+P
Sbjct: 533 GTLKGYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISP 592
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRR----KHMPRAIGPKFPIVVTSYEVA 268
STL NW E+SRFVP + Y GS ER +R+ KH+ F +V+TSY++
Sbjct: 593 ASTLHNWQQEMSRFVPDFKVVPYWGSPAERKILRQFWDQKHL-HTRDASFHVVITSYQLV 651
Query: 269 LSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWS 328
+SD KY W+Y+V+DE +K+ + K L N+LLL+GTP+QN++AELW+
Sbjct: 652 VSDY-KYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 710
Query: 329 LLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
LLHFI+P +F S +EF WF + ++E K ++EK+ +++LH IL+PF+LRR+K
Sbjct: 711 LLHFIMPTLFDSHDEFNEWFSKDIESHAE-NKTGIDEKQ----ISRLHMILKPFMLRRIK 765
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKT-LEN--HLRE-KVFSAGRGMKGKLNN 444
DVE L K EI++Y +T Q+ L K +E+ HL ++ L N
Sbjct: 766 KDVENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMN 825
Query: 445 LMVQLRKNCNHPDLLESAFSDSCFY 469
L++Q RK CNHP+L E + S F+
Sbjct: 826 LVMQFRKVCNHPELFERRDARSPFF 850
Score = 387 (141.3 bits), Expect = 3.0e-103, Sum P(3) = 3.0e-103
Identities = 78/175 (44%), Positives = 106/175 (60%)
Query: 466 SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCR 525
S P E ++ GK H+VL++SQ TK++D++E Y + + R
Sbjct: 1142 SIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMR 1201
Query: 526 IDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQ 585
+DGS ++ R+ + DF + +FLLSTRAGGLGINLTAADT I YDSDWNP +D Q
Sbjct: 1202 LDGSSKISARRDMVADFQ-TRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQ 1260
Query: 586 AMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
AMDR HR+GQTK V VYRL ++E RIL+RA K +++ +VI G F + K
Sbjct: 1261 AMDRAHRLGQTKQVTVYRLICKGTIEERILQRAREKSEIQRMVISGGNFKPDTLK 1315
Score = 62 (26.9 bits), Expect = 3.0e-103, Sum P(3) = 3.0e-103
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 39 EQENVSKNEDHLNDL--QFNKLDELLTQTQMYAEFLLEKM 76
E E K + L ++ Q KL+ L+TQT++YA F+ +K+
Sbjct: 397 EAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFMSKKL 436
Score = 41 (19.5 bits), Expect = 2.6e-31, Sum P(2) = 2.6e-31
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 72 LLEKMEDITVNGVEQESEPV 91
L+E+MED++ +E ES V
Sbjct: 1026 LIEEMEDVSKQKLEIESVEV 1045
Score = 38 (18.4 bits), Expect = 5.3e-31, Sum P(2) = 5.3e-31
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 400 EIILYATMTEHQRNFQDHLINKTLENHLREK 430
+++L T ++ +D + + L H+RE+
Sbjct: 117 DLLLSDTESDDPTITEDEYVQQLLREHVREQ 147
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 1026 (366.2 bits), Expect = 7.4e-103, P = 7.4e-103
Identities = 220/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ L++ G LK YQ++G++W++SL+ N LNGILAD+MGLGKTIQTI + +L
Sbjct: 713 RVDKQSTFLIN----GTLKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYL 768
Query: 199 KG-NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
L+GPYL+I PLSTLSNWV E+ ++ PS+ I Y G+ +RR +P+ K
Sbjct: 769 MELKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPS----MRRSLVPQLRSGK 824
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 825 FNVLITTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 882
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 883 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 940
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 941 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKD-KK 999
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYP----PVEQIVEQCGKXXXXXX 487
G+G L N ++QL+K CNHP + +E +F++ +P + GK
Sbjct: 1000 GKGGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGFPNGIISGPDLYRASGKFELLDR 1059
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ I+E YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1060 ILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLLKKFNEEGS 1119
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1120 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1179
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1180 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1209
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 221/501 (44%), Positives = 304/501 (60%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLH 204
E S+L GGKLK YQL+G++W+ISL+ N LNGILAD+MGLGKTIQTI+ + HL + +
Sbjct: 407 EQPSILVGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQN 466
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+LVI PLSTL+NW E R+ PS+ I+Y G ++R+ P+ F +++T+
Sbjct: 467 GPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPP----QVRKALHPQVRHSNFQVLLTT 522
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTGTPLQNNL 323
YE + D R L W Y+++DEGHR+KN + KL L Y +L+LTGTPLQNNL
Sbjct: 523 YEYIIKD-RPLLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNL 581
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELW+LL+F+LP IF+S++ F WF+ K EL E+ ++ +LH +LRPFL
Sbjct: 582 PELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFL 641
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG-K- 441
LRR+K DVE LP K E ++ M+ Q L + ++ H V A RG G K
Sbjct: 642 LRRLKKDVEAELPDKVEKVIRCQMS----GLQQKLYYQ-MKKHGMLYVEDAKRGKTGIKG 696
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPP---VEQIVEQCGKXXXXXXXXXXXXXXNHK 498
L N ++QL+K CNHP + E + P + + GK H+
Sbjct: 697 LQNTVMQLKKICNHPFVFEDV--ERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHR 754
Query: 499 VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRA 558
+L+F Q T+I++IME Y + + + R+DGS + D+R + + FND + +FLLSTRA
Sbjct: 755 ILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRA 814
Query: 559 GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRA 618
GGLG+NL ADT I++DSDWNP DLQA DR HRIGQTK V +YRL T +SVE IL RA
Sbjct: 815 GGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILARA 874
Query: 619 FSKLKLEHVVIGKGQFHQERT 639
KL ++ VI G+F + T
Sbjct: 875 QYKLDIDGKVIQAGKFDNKST 895
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 1018 (363.4 bits), Expect = 9.8e-103, P = 9.8e-103
Identities = 230/578 (39%), Positives = 333/578 (57%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
R+ +E E S+L GG LK YQ+KG++W+ISL+ N LNGILAD+MGLGKTIQTI+ + H+
Sbjct: 520 RIKEEITEQPSILVGGTLKEYQMKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITHI 579
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ +GP+LVI PLSTL+NW E ++ PSVS I+Y G R + +++++
Sbjct: 580 IERKRNNGPFLVIVPLSTLTNWNLEFEKWAPSVSRIVYKGPPNARKQ-QQQNIRWG---N 635
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKEL-KYIPIGNKLLLTG 316
F +++T+YE + D R L W +++VDEGHR+KN + KL L +Y +L+LTG
Sbjct: 636 FQVLLTTYEYIIKD-RPILSKIKWTHMIVDEGHRMKNTQSKLSSTLSQYYTSRYRLILTG 694
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNNL ELW+LL+F+LP+IF S++ F WF+ + +L E+ + ++ +LH
Sbjct: 695 TPLQNNLPELWALLNFVLPNIFKSVKSFDEWFNTPFANTGGQDRMDLTEEEQLLVIRRLH 754
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR 436
+LRPFLLRR+K DVE+ LP K+E ++ + Q +NK L H + V S G+
Sbjct: 755 KVLRPFLLRRLKKDVEKDLPDKQERVIKCRFSALQAK-----LNKQLATH-NKMVVSDGK 808
Query: 437 G----MKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIV-EQCGKXXXXXXXXXX 491
G M+G L+N+++QLRK CNHP + E ++ GK
Sbjct: 809 GGKVGMRG-LSNMLMQLRKLCNHPFVFEQVEDQVNPGRGTNDLIWRTAGKFELLDRILPK 867
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+F Q T+I++IME + +G + R+DGS + D+R ++ FN +S Y
Sbjct: 868 FKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSDDRSDLLKLFNAPDSEYFC 927
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLG+NL ADT I++DSDWNP DLQA DR HRIGQ V + RL T+ SVE
Sbjct: 928 FLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRILRLITSNSVE 987
Query: 612 GRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDI 671
+IL+RA KL ++ VI G+F + T Q ++
Sbjct: 988 EKILERAQFKLDMDGKVIQAGKFDNKSTNEERDALLRTLLETAEGTDQAGD-----QDEM 1042
Query: 672 GEEDLERVLDRADLIAGCLD--DEEKPNAAVYPLKGPG 707
++DL ++ R+D D E+ Y GPG
Sbjct: 1043 DDDDLNNIMARSDEELAVFQRMDRERQKTCPY---GPG 1077
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 1024 (365.5 bits), Expect = 1.1e-102, P = 1.1e-102
Identities = 225/510 (44%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ SLL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 685 RVEKQS----SLLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 740
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 741 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 796
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 797 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 854
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 855 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 912
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 913 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 971
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 972 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1031
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1032 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1091
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1092 QYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1151
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1152 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1181
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 1020 (364.1 bits), Expect = 2.2e-102, P = 2.2e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 718 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 773
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 774 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 829
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 830 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 887
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 888 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 945
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 946 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 1004
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 1005 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1064
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1065 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1124
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1125 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1184
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1185 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1214
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 1020 (364.1 bits), Expect = 3.1e-102, P = 3.1e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 693 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 748
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 749 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 804
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 805 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 862
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 863 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 920
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 921 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 979
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 980 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1039
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1040 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1099
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1100 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1159
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1160 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1189
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 1021 (364.5 bits), Expect = 3.1e-102, P = 3.1e-102
Identities = 228/510 (44%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RVDK+ +L+ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 733 RVDKQS----ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYL 788
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ ++GP+L+I PLSTLSNW E ++ PSV + Y GS R R +P+ K
Sbjct: 789 MEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR----RAFVPQLRSGK 844
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ +LLLT
Sbjct: 845 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRLLLT 902
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E K +L E+ ++ +L
Sbjct: 903 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--KVDLNEEETILIIRRL 960
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ QR H+ K L EK
Sbjct: 961 HKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKD-KK 1019
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSC-FYPPVEQ---IVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +FS+ F + Q + GK
Sbjct: 1020 GKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDR 1079
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NHKVL+F Q T ++ IME YF +G++ R+DG+ + ++R + FN+ S
Sbjct: 1080 ILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRG-MLLTFNEPGS 1138
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y I LLSTRAGGLG+NL +ADT I++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1139 EYFI-LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1197
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1198 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1227
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 1020 (364.1 bits), Expect = 3.1e-102, P = 3.1e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 695 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 750
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 751 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 806
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 807 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 864
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 865 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 922
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 923 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 981
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 982 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1041
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1042 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1101
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1102 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1161
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1162 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1191
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 1020 (364.1 bits), Expect = 3.1e-102, P = 3.1e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 695 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 750
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 751 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 806
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 807 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 864
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 865 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 922
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 923 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 981
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 982 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1041
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1042 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1101
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1102 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1161
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1162 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1191
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 1020 (364.1 bits), Expect = 3.5e-102, P = 3.5e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 695 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 750
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 751 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 806
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 807 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 864
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 865 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 922
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 923 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 981
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 982 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1041
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1042 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1101
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1102 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1161
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1162 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1191
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 1020 (364.1 bits), Expect = 3.5e-102, P = 3.5e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 716 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 771
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 772 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 827
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 828 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 885
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 886 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 943
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 944 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 1002
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 1003 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1062
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1063 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1122
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1123 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1182
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1183 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1212
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 1020 (364.1 bits), Expect = 3.7e-102, P = 3.7e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 711 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 766
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 767 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 822
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 823 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 880
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 881 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 938
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 939 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 997
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 998 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1057
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1058 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1117
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1118 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1177
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1178 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1207
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 1020 (364.1 bits), Expect = 3.9e-102, P = 3.9e-102
Identities = 223/510 (43%), Positives = 308/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQTIA + +L
Sbjct: 718 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYL 773
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ L+GPYL+I PLSTLSNW E ++ PSV I Y G+ +RR +P+ K
Sbjct: 774 MEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKGTPA----MRRSLVPQLRSGK 829
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F +++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 830 FNVLLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 887
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 888 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 945
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 946 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 1004
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 1005 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1064
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1065 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1124
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1125 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1184
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1185 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1214
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 1013 (361.7 bits), Expect = 2.2e-101, P = 2.2e-101
Identities = 222/510 (43%), Positives = 306/510 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
RV+K+ +LL G LK YQL+G++W++SL+ N LNGILAD+MG GKTIQTIA + +L
Sbjct: 718 RVEKQS----ALLINGTLKHYQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITYL 773
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ GL+GPYL+I PLSTLSNW E ++ PS I Y G+ +RR +P+ K
Sbjct: 774 MEHKGLNGPYLIIVPLSTLSNWTYEFDKWAPSAVKISYKGTPA----MRRSLVPQLRSGK 829
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLT 315
F ++T+YE + D + L WKY++VDEGHR+KN CKL + L Y+ ++LLT
Sbjct: 830 FNALLTTYEYIIKD-KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVA-PRRILLT 887
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQN L ELW+LL+F+LP IF S F+ WF+ E + +L E+ ++ +L
Sbjct: 888 GTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE--RVDLNEEETILIIRRL 945
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSA 434
H +LRPFLLRR+K +VE LP K E ++ M+ Q+ H+ K L EK
Sbjct: 946 HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKD-KK 1004
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL---LESAFSDSCFYPPV----EQIVEQCGKXXXXXX 487
G+G L N ++QLRK CNHP + +E +F++ Y ++ GK
Sbjct: 1005 GKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDR 1064
Query: 488 XXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNS 547
NH+VL+F Q T ++ IME YF + + R+DG+ + ++R ++ FN+ S
Sbjct: 1065 ILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGS 1124
Query: 548 SYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
Y IFLLSTRAGGLG+NL AADT +++DSDWNP DLQA DR HRIGQ V V RL T
Sbjct: 1125 QYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTV 1184
Query: 608 QSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
SVE +IL A KL ++ VI G F Q+
Sbjct: 1185 NSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1214
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 644 (231.8 bits), Expect = 7.0e-101, Sum P(3) = 7.0e-101
Identities = 134/311 (43%), Positives = 192/311 (61%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPL 213
KLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+I+ +A+L + + + GP+LVIAP
Sbjct: 841 KLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPA 900
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIR----RKHMPRAIGPKFPIVVTSYEVAL 269
STL NW EI+RFVP + I Y GS K+R +R RK+M F +VVTSY++ +
Sbjct: 901 STLHNWQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVV 960
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
DA+ Y + W+Y+++DE +K+ K L N+LLLTGTP+QN + ELW+L
Sbjct: 961 LDAQ-YFQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWAL 1019
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EF WF + +++ +L E Q + +LH IL+PF+LRR+K
Sbjct: 1020 LHFIMPSLFDSHNEFSEWFSKDIESHAQ-SNTQLNE----QQLKRLHMILKPFMLRRVKK 1074
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQL 449
+V+ L K E +Y +T+ Q+ L + L EK G + NL++Q
Sbjct: 1075 NVQSELGEKIEKEVYCDLTQRQKILYQALRRQISIAELLEKAILGGDDTVASIMNLVMQF 1134
Query: 450 RKNCNHPDLLE 460
RK CNHPDL E
Sbjct: 1135 RKVCNHPDLFE 1145
Score = 359 (131.4 bits), Expect = 7.0e-101, Sum P(3) = 7.0e-101
Identities = 72/164 (43%), Positives = 103/164 (62%)
Query: 470 PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGS 529
P + + + GK +H+VL++ Q T+++D+ME Y + Y+ R+DGS
Sbjct: 1419 PSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGS 1478
Query: 530 VRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDR 589
++ +R+ + ++ + +FLLSTRAGGLGINLTAADT I YDSDWNP +D QAMDR
Sbjct: 1479 SKISQRRDMVTEWQTRPELF-VFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDR 1537
Query: 590 CHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQ 633
HRIGQ K V VYR T ++E RI+ RA K +++ VVI G+
Sbjct: 1538 AHRIGQQKQVTVYRFITRGTIEERIVIRAKEKEEVQKVVISGGE 1581
Score = 69 (29.3 bits), Expect = 7.0e-101, Sum P(3) = 7.0e-101
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 44 SKNEDHLNDL--QFNKLDELLTQTQMYAEFLLEKME 77
+K E+ L + Q KLD L+TQT++Y+ F+ KM+
Sbjct: 715 AKKEEELRESRRQARKLDFLITQTELYSHFVGRKMD 750
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 1000 (357.1 bits), Expect = 2.8e-100, P = 2.8e-100
Identities = 221/494 (44%), Positives = 297/494 (60%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLHGPYLVIAP 212
LK YQ+KG++W++SL+ N LNGILAD+MGLGKTIQTI+ + +L K N +GPYLVI P
Sbjct: 533 LKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQN--NGPYLVIVP 590
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
LSTLSNW NE +++ PSV+ IIY G+K R + + A F +++T+YE + +
Sbjct: 591 LSTLSNWQNEFAKWAPSVTTIIYKGTKDARRRVEGQIRKGA----FNVLMTTYEYVIKE- 645
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTGTPLQNNLAELWSLLH 331
+ L WKY+++DEGHRLKN CKL L + ++LLLTGTPLQN L ELW+LL+
Sbjct: 646 KALLGKIRWKYMIIDEGHRLKNHNCKLTLMLNGFFHAQHRLLLTGTPLQNKLPELWALLN 705
Query: 332 FILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV 391
F+LP IFSS F+ WF+ E K EL ++ ++ +LH +LRPFLLRR+K +V
Sbjct: 706 FLLPSIFSSCGTFEQWFNAPFATTGE--KVELNQEETMLIIRRLHKVLRPFLLRRLKKEV 763
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRK 451
E LP K E ++ + Q+ H+ L L K+ S R L N +V LRK
Sbjct: 764 ESQLPDKTEYVIKCDQSALQKVIYRHMQKGLL---LDAKMSSGARS----LMNTVVHLRK 816
Query: 452 NCNHPDLLESAFSDSC-FYPPVEQI-----VEQCGKXXXXXXXXXXXXXXNHKVLVFSQW 505
CNHP L + DSC Y V ++ + GK H++L+F Q
Sbjct: 817 LCNHPFLFPN-IEDSCRAYWKVNEVNGTDLMRVAGKLELLDRILPKLKATGHRILMFFQM 875
Query: 506 TKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINL 565
T +++I E + N + Y R+DGS + DER + FN NS +F+LSTRAGGLG+NL
Sbjct: 876 TSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLSTRAGGLGLNL 935
Query: 566 TAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLE 625
ADT I++DSDWNP D+QA DR HRIGQ K V V RL TA SVE +IL A KL ++
Sbjct: 936 QTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILAAARYKLNVD 995
Query: 626 HVVIGKGQFHQERT 639
VI G+F Q T
Sbjct: 996 EKVIQAGKFDQRST 1009
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 623 (224.4 bits), Expect = 3.4e-100, Sum P(3) = 3.4e-100
Identities = 135/327 (41%), Positives = 195/327 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLS 214
LK YQLKG+ WL +L+ G+NGILAD+MGLGKT+Q+I+ LAHL N + GP+LV+ P S
Sbjct: 706 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPAS 765
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIR----RKHMPRAIGPKFPIVVTSYEVALS 270
TL NWVNEIS+F+P + Y G+ +R +R RK++ F ++VTSY++ ++
Sbjct: 766 TLHNWVNEISKFLPQFKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVT 825
Query: 271 DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLL 330
DA YL+ W+Y+++DE +K+ + K L N+LLLTGTP+QN++ ELW+LL
Sbjct: 826 DAN-YLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALL 884
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
HFI+P +F S +EF WF + ++E K Q + +LH IL+PF+LRR+K +
Sbjct: 885 HFIMPSLFDSHDEFNEWFSKDIESHAEA-----NTKLNQQQLRRLHMILKPFMLRRVKKN 939
Query: 391 VEQMLPRKKEIILYATMTEHQRNFQDHLINK------TLENHLREKVFS---AGRGMKGK 441
V+ L K EI + +T+ Q L ++ +EN S + G
Sbjct: 940 VQSELGDKIEIDVLCDLTQRQAKLYQVLKSQISTNYDAIENAATNDSTSNSASNSGSDQN 999
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCF 468
L N ++Q RK CNHPDL E A DS F
Sbjct: 1000 LINAVMQFRKVCNHPDLFERADVDSPF 1026
Score = 379 (138.5 bits), Expect = 3.4e-100, Sum P(3) = 3.4e-100
Identities = 78/179 (43%), Positives = 110/179 (61%)
Query: 456 PDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYY 515
P+ L FS + P +++ + + K H+VL++ Q TK++D+ME Y
Sbjct: 1275 PEPLNKNFSSNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMMDLMEEY 1334
Query: 516 FNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYD 575
+ Y R+DGS +L++R+ + D+ N +FLLSTRAGGLGINLTAADT I YD
Sbjct: 1335 LTYRQYNHIRLDGSSKLEDRRDLVHDWQ-TNPEIFVFLLSTRAGGLGINLTAADTVIFYD 1393
Query: 576 SDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVI-GKGQ 633
SDWNP +D QAMDR HR+GQT+ V VYRL ++E R+ RA K +++ VV+ GK Q
Sbjct: 1394 SDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVMEGKTQ 1452
Score = 62 (26.9 bits), Expect = 3.4e-100, Sum P(3) = 3.4e-100
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 41 ENVSKNEDHLNDL-QFNKLDELLTQTQMYAEFLLEKMEDITVNG 83
E K E+ Q KL+ LLTQT++Y+ F+ K++ + G
Sbjct: 563 EQAKKEEEEKESKRQAKKLNFLLTQTELYSHFIGRKIKTNELEG 606
Score = 43 (20.2 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 349 DLSGKCNSEVM---KEELEEKRRGQMVAKLHAIL 379
DL K E M K+E EEK + KL+ +L
Sbjct: 552 DLKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLL 585
Score = 40 (19.1 bits), Expect = 6.9e-98, Sum P(3) = 6.9e-98
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 144 QRELVSLLTGGKLKSYQLKG 163
Q EL S G K+K+ +L+G
Sbjct: 587 QTELYSHFIGRKIKTNELEG 606
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 215/507 (42%), Positives = 313/507 (61%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
++DK+ S+L GG LK YQL+G++W++SL+ N LNGILAD+MGLGKTIQ+I+ + +L
Sbjct: 457 KIDKQP----SILVGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYL 512
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ GP+LVI PLST++NW E ++ PS++ IIY G+ +R ++ H R +G
Sbjct: 513 YEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQ--HQIR-VG-N 568
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTG 316
F +++T+YE + D + L ++W ++++DEGHR+KN + KL + Y N+L+LTG
Sbjct: 569 FDVLLTTYEYIIKD-KSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTG 627
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNNL ELW+LL+F+LP IF+S + F+ WF+ K EL E+ ++ +LH
Sbjct: 628 TPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLH 687
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLREKVFSAG 435
+LRPFLLRR+K +VE+ LP K E ++ ++ Q+ +Q L + L + + G
Sbjct: 688 KVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKG 747
Query: 436 RGMKGKLNNLMVQLRKNCNHP---DLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXX 492
G+KG LNN ++QLRK CNHP D +E + S + + GK
Sbjct: 748 -GIKG-LNNKIMQLRKICNHPFVFDEVEGVVNPS--RGNSDLLFRVAGKFELLDRVLPKF 803
Query: 493 XXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 552
H+VL+F Q T+++DIME + K + R+DGS + +ER + FN +S Y F
Sbjct: 804 KASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863
Query: 553 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 612
LLSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T SVE
Sbjct: 864 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEE 923
Query: 613 RILKRAFSKLKLEHVVIGKGQFHQERT 639
IL+RA KL ++ VI G+F + T
Sbjct: 924 VILERAMQKLDIDGKVIQAGKFDNKST 950
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 1001 (357.4 bits), Expect = 5.2e-100, P = 5.2e-100
Identities = 222/506 (43%), Positives = 298/506 (58%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LH 204
E S++ G LK YQ+KG++WL+SL+ N LNGILAD+MGLGKTIQTI+ + +L +
Sbjct: 763 EQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVM 822
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GPYL+I PLSTL NWV E ++ P+V + Y GS + R + + M RA KF +++T+
Sbjct: 823 GPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGR-RLLQNQM-RAT--KFNVLLTT 878
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK--YIPIGNKLLLTGTPLQNN 322
YE + D + L WKY+++DEGHR+KN CKL + L YI +LLLTGTPLQN
Sbjct: 879 YEYVIKD-KAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIA-PYRLLLTGTPLQNK 936
Query: 323 LAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
L ELW+LL+F+LP IF S F+ WF+ E K EL E+ ++ +LH +LRPF
Sbjct: 937 LPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE--KVELNEEETILIIRRLHKVLRPF 994
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMKGK 441
LLRR+K +VE LP K E I+ M+ QR H+ +K L EK G+G
Sbjct: 995 LLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEKG-KHGKGGAKA 1053
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQ------CGKXXXXXXXXXXXXXX 495
L N +VQLRK CNHP + + C + +V GK
Sbjct: 1054 LMNTIVQLRKLCNHPFMFQHIEEKYCDHTGGHGVVSGPDLYRVSGKFELLDRILPKLKAT 1113
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
NH+VL+F Q T+ + I+E Y + + R+DG+ + ++R ++ FN S +FLLS
Sbjct: 1114 NHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLS 1173
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLG+NL ADT +++DSDWNP DLQA DR HRIGQ V V RL T SVE RIL
Sbjct: 1174 TRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERIL 1233
Query: 616 KRAFSKLKLEHVVIGKGQFHQERTKS 641
A KL ++ VI G F Q+ T S
Sbjct: 1234 AAARYKLNMDEKVIQAGMFDQKSTGS 1259
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 975 (348.3 bits), Expect = 9.1e-100, Sum P(3) = 9.1e-100
Identities = 230/617 (37%), Positives = 338/617 (54%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGV-EQESEPVXXXX 95
N + + + L + +L L + + LL+ +D + + EQ ++ +
Sbjct: 660 NFHNQTAKEEQKKLEKMAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLEQTNQFLDSLA 719
Query: 96 XXXXXXXAAPQCNTRKAKRAVA-AMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGG 154
Q N + RA+ A + R+ +E + S+L GG
Sbjct: 720 LAVQSQQKEAQDNLAYSGRAIEPASVEPLDDEKREKIDYYNVAHRIKEEVTKQPSILVGG 779
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPL 213
LK YQLKG++W++SL+ N LNGILAD+MGLGKTIQTI+ L +L + + GP+LVI PL
Sbjct: 780 TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPL 839
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDAR 273
ST++NW E ++ PS+ I Y G+ +R ++ H R G F +V+T++E + D +
Sbjct: 840 STVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQ--HDIRT-G-NFQLVLTTFEYVIKD-K 894
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKEL-KYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
L W ++++DEGHR+KN KL + L + +L+LTGTPLQNNL ELW+LL+F
Sbjct: 895 GLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNF 954
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+LP IF+S++ F WF+ K EL E+ ++ +LH +LRPFLLRR+K DVE
Sbjct: 955 VLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVE 1014
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL-------NNL 445
+ LP K E ++ + Q +K + LR + AG G + NN
Sbjct: 1015 KDLPNKVEKVVKCKSSALQ--------SKLYQQMLRYNMLYAGDPANGSVPVTIKNANNQ 1066
Query: 446 MVQLRKNCNHPDLLESAFSDSCFYPPVE---QIVEQCGKXXXXXXXXXXXXXXNHKVLVF 502
++QL+K CNHP + E ++ P +E QI GK HKVL+F
Sbjct: 1067 IMQLKKICNHPFVYEEV--ENLINPNIETNDQIWRVAGKFELLDKVLPKFKATGHKVLIF 1124
Query: 503 SQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLG 562
Q T+I++IME + +G + R+DG + D+R ++ FN +S Y FLLSTRAGGLG
Sbjct: 1125 FQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLG 1184
Query: 563 INLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKL 622
+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T SVE IL+RA KL
Sbjct: 1185 LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKL 1244
Query: 623 KLEHVVIGKGQFHQERT 639
+++ VI G+F + T
Sbjct: 1245 EIDGKVIQAGKFDNKST 1261
Score = 41 (19.5 bits), Expect = 9.1e-100, Sum P(3) = 9.1e-100
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 39 EQENVSKNEDHLNDLQFNKLDELLTQ 64
E+E + K D LN+ K EL TQ
Sbjct: 532 EKERLRKQIDSLNEKDTEKKLELETQ 557
Score = 37 (18.1 bits), Expect = 9.1e-100, Sum P(3) = 9.1e-100
Identities = 5/20 (25%), Positives = 14/20 (70%)
Query: 665 KMIQTDIGEEDLERVLDRAD 684
K + ++ E+++ ++LD A+
Sbjct: 1616 KELSANLSEDEINKILDFAE 1635
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 975 (348.3 bits), Expect = 9.1e-100, Sum P(3) = 9.1e-100
Identities = 230/617 (37%), Positives = 338/617 (54%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGV-EQESEPVXXXX 95
N + + + L + +L L + + LL+ +D + + EQ ++ +
Sbjct: 660 NFHNQTAKEEQKKLEKMAKQRLQALKSNDEEAYLKLLDHTKDTRITHLLEQTNQFLDSLA 719
Query: 96 XXXXXXXAAPQCNTRKAKRAVA-AMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGG 154
Q N + RA+ A + R+ +E + S+L GG
Sbjct: 720 LAVQSQQKEAQDNLAYSGRAIEPASVEPLDDEKREKIDYYNVAHRIKEEVTKQPSILVGG 779
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPL 213
LK YQLKG++W++SL+ N LNGILAD+MGLGKTIQTI+ L +L + + GP+LVI PL
Sbjct: 780 TLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLVEVKKIPGPFLVIVPL 839
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDAR 273
ST++NW E ++ PS+ I Y G+ +R ++ H R G F +V+T++E + D +
Sbjct: 840 STVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQ--HDIRT-G-NFQLVLTTFEYVIKD-K 894
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKEL-KYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
L W ++++DEGHR+KN KL + L + +L+LTGTPLQNNL ELW+LL+F
Sbjct: 895 GLLGRIKWVHMIIDEGHRMKNANSKLSETLTQNYHSDYRLILTGTPLQNNLPELWALLNF 954
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+LP IF+S++ F WF+ K EL E+ ++ +LH +LRPFLLRR+K DVE
Sbjct: 955 VLPKIFNSVKSFDEWFNTPFANTGGQDKIELTEEETLLVIRRLHKVLRPFLLRRLKKDVE 1014
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL-------NNL 445
+ LP K E ++ + Q +K + LR + AG G + NN
Sbjct: 1015 KDLPNKVEKVVKCKSSALQ--------SKLYQQMLRYNMLYAGDPANGSVPVTIKNANNQ 1066
Query: 446 MVQLRKNCNHPDLLESAFSDSCFYPPVE---QIVEQCGKXXXXXXXXXXXXXXNHKVLVF 502
++QL+K CNHP + E ++ P +E QI GK HKVL+F
Sbjct: 1067 IMQLKKICNHPFVYEEV--ENLINPNIETNDQIWRVAGKFELLDKVLPKFKATGHKVLIF 1124
Query: 503 SQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLG 562
Q T+I++IME + +G + R+DG + D+R ++ FN +S Y FLLSTRAGGLG
Sbjct: 1125 FQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLLKSFNAPDSDYFCFLLSTRAGGLG 1184
Query: 563 INLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKL 622
+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T SVE IL+RA KL
Sbjct: 1185 LNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENSVEEMILERAHKKL 1244
Query: 623 KLEHVVIGKGQFHQERT 639
+++ VI G+F + T
Sbjct: 1245 EIDGKVIQAGKFDNKST 1261
Score = 41 (19.5 bits), Expect = 9.1e-100, Sum P(3) = 9.1e-100
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 39 EQENVSKNEDHLNDLQFNKLDELLTQ 64
E+E + K D LN+ K EL TQ
Sbjct: 532 EKERLRKQIDSLNEKDTEKKLELETQ 557
Score = 37 (18.1 bits), Expect = 9.1e-100, Sum P(3) = 9.1e-100
Identities = 5/20 (25%), Positives = 14/20 (70%)
Query: 665 KMIQTDIGEEDLERVLDRAD 684
K + ++ E+++ ++LD A+
Sbjct: 1616 KELSANLSEDEINKILDFAE 1635
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 619 (223.0 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 129/317 (40%), Positives = 195/317 (61%)
Query: 145 RELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGL 203
R + L L+ YQ G+ WL+++++ LNGILAD+MGLGKTI TIA LAHL G+
Sbjct: 525 RTKLPFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGI 584
Query: 204 HGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP+L++ P S + NW E ++ P+ + Y GS KER +++R+ + F + +T
Sbjct: 585 WGPHLIVVPTSVMLNWETEFLKWCPAFKILTYFGSAKER-KLKRQGWMKL--NSFHVCIT 641
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
+Y + + D++ + R WKYL++DE H +KN K + + L ++LLTGTPLQN+L
Sbjct: 642 TYRLVIQDSKMFKRK-KWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDL 700
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSL+HF++P +F S +EF+ WF CN E +EK +++ +LH +LRPFL
Sbjct: 701 MELWSLMHFLMPHVFQSHQEFKDWF-----CNPIAGMVEGQEKINKEVIDRLHNVLRPFL 755
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN 443
LRR+K DVE+ LP K E +++ +++ QRN + I T E + ++G G ++
Sbjct: 756 LRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYEDFIAST-ET---QATLTSG-SFFGMIS 810
Query: 444 NLMVQLRKNCNHPDLLE 460
+M QLRK CNHPDL E
Sbjct: 811 IIM-QLRKVCNHPDLFE 826
Score = 402 (146.6 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 78/170 (45%), Positives = 109/170 (64%)
Query: 469 YPPVEQIVE-QCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRID 527
Y P ++++ CGK H+ L+F+Q TK+LD++E + N GY R+D
Sbjct: 1063 YFPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMTKMLDVLEAFINLYGYTYMRLD 1122
Query: 528 GSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 587
GS +ER+ +Q FN N +F+LSTR+GG+GINL ADT I YDSDWNP MD QA
Sbjct: 1123 GSTPPEERQTLMQRFN-TNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQ 1181
Query: 588 DRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
DRCHRIGQT+ VH+YRL + ++E ILK+A K L+++VI G+++ E
Sbjct: 1182 DRCHRIGQTREVHIYRLISESTIEENILKKANQKRVLDNLVIQNGEYNTE 1231
Score = 46 (21.3 bits), Expect = 1.1e-99, Sum P(3) = 1.1e-99
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 57 KLDELLTQTQMYAEFLLEKMEDITVNGVEQESEPV 91
+L+ LL QT+ Y+ L E + + G S+P+
Sbjct: 143 QLEFLLGQTERYSTMLAENLVEPYKQGQNTPSKPL 177
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 984 (351.4 bits), Expect = 3.0e-99, Sum P(2) = 3.0e-99
Identities = 213/503 (42%), Positives = 297/503 (59%)
Query: 143 EQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGN 201
E+ E + GG LK YQLKG++W++SL+ N LNGILAD+MGLGKTIQTIAF+ +L +
Sbjct: 856 EEVEQPKIFVGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKK 915
Query: 202 GLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIV 261
GP+L+I PLSTL+NW+ E ++ PSV I Y G ++R+ + F ++
Sbjct: 916 NQQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPP----QLRKTLQSQIRSSNFNVL 971
Query: 262 VTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTGTPLQ 320
+T++E + D R L W ++++DEGHR+KN + KL L Y +L+LTGTPLQ
Sbjct: 972 LTTFEYIIKD-RPLLSRIKWVHMIIDEGHRIKNTQSKLTSTLSTYYHSQYRLILTGTPLQ 1030
Query: 321 NNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILR 380
NNL ELW+LL+F+LP IF+S++ F WF+ K L E+ ++ +LH +LR
Sbjct: 1031 NNLPELWALLNFVLPKIFNSIKSFDEWFNTPFANTGGQDKIGLNEEEALLIIKRLHKVLR 1090
Query: 381 PFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR-GMK 439
PFL RR+K DVE+ LP K E ++ ++ Q + + EK G+ G+K
Sbjct: 1091 PFLFRRLKKDVEKELPDKVEKVIKCPLSGLQLKLYQQMKKHGMLFVDGEK----GKTGIK 1146
Query: 440 GKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP---VEQIVEQCGKXXXXXXXXXXXXXXN 496
G L N ++QL+K CNHP + E + P V+ + GK
Sbjct: 1147 G-LQNTVMQLKKICNHPFIFEDV--ERAIDPSGTNVDLLWRAAGKFELLDRILPKLFLTG 1203
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
HK L+F Q T+I+ IME Y K ++ R+DGS + D+R + FND S IF+LST
Sbjct: 1204 HKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLLAQFNDPKSDVYIFMLST 1263
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQTK V + RL T +S+E IL
Sbjct: 1264 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITEKSIEENILS 1323
Query: 617 RAFSKLKLEHVVIGKGQFHQERT 639
RA KL L+ VI G+F + T
Sbjct: 1324 RAQYKLDLDGKVIQAGKFDNKST 1346
Score = 40 (19.1 bits), Expect = 3.0e-99, Sum P(2) = 3.0e-99
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDE 60
+ E N+ K +D L FN L E
Sbjct: 72 DAENTNLRKQQDTLPTTGFNNLPE 95
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 219/514 (42%), Positives = 299/514 (58%)
Query: 140 VDKEQRELVSLLTGG----KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFL 195
V +E +E ++ GG KLK YQ+KG++W++SL+ N LNGILAD+MGLGKTIQTIAF+
Sbjct: 346 VREEIKEQHFMMGGGNPSLKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFI 405
Query: 196 AHLKG-NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAI 254
+L GP+LVI PLST+ NW NE ++ +V I Y G K E R+ P
Sbjct: 406 TYLMEIKKTSGPFLVIVPLSTVPNWQNEFDKWAANVHLIAYKGPK----ETRKVFEPIIK 461
Query: 255 GPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKY-IPIGNKLL 313
KF +++T++E + + + L WKY+++DEGHRLKN CKL + L +LL
Sbjct: 462 SGKFNVLLTTFEYVIRE-KALLGKLRWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLL 520
Query: 314 LTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVA 373
+TGTPLQN L ELW+LL+F+LP IFSS F+ WF+ E K EL ++ ++
Sbjct: 521 ITGTPLQNKLPELWALLNFLLPSIFSSCSTFEQWFNAPFATTGE--KVELTQEETMLIIR 578
Query: 374 KLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFS 433
+LH +LRPFLLRR+K +VE LP K E ++ M+ Q K L H+++ +
Sbjct: 579 RLHKVLRPFLLRRLKKEVESELPDKMEFVVRCDMSALQ---------KVLYKHMQKGLLL 629
Query: 434 AGRGMKGK--LNNLMVQLRKNCNHPDLLESA------FSDSCFYPPVEQIVEQCGKXXXX 485
G+ G L N M+ LRK CNHP L E+ F D+ F V+ + GK
Sbjct: 630 DGKTNTGSKSLRNTMIHLRKLCNHPFLFENVEESCRNFWDARFISAVD-LYRVSGKLELL 688
Query: 486 XXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDV 545
H+VL+F Q T ++ I+E + + R+DGS + DER + FN
Sbjct: 689 SRILPKLQATGHRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAP 748
Query: 546 NSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLA 605
NS Y +F+LSTRAGGLG+NL ADT I++DSDWNP D+QA DR HRIGQ V V+RL
Sbjct: 749 NSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLI 808
Query: 606 TAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
TA SVE +IL A KL ++ VI G+F T
Sbjct: 809 TANSVEEKILAAARYKLNVDEKVIQAGKFDNRST 842
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 984 (351.4 bits), Expect = 4.4e-98, P = 4.4e-98
Identities = 215/506 (42%), Positives = 308/506 (60%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
R+ ++ ++ S+L GG LK YQ+KG++W++SL+ N LNGILAD+MGLGKTIQTI+ L +L
Sbjct: 750 RIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYL 809
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
+ + GPYLVI PLSTLSNW +E +++ P++ I + GS ER + K RA G +
Sbjct: 810 YEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKI--RA-G-E 865
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELK-YIPIGNKLLLTG 316
F +V+T++E + + R L W ++++DEGHR+KN + KL L + +L+LTG
Sbjct: 866 FDVVLTTFEYIIKE-RALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTG 924
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNNL ELW+LL+F+LP IF+S++ F WF+ K EL E+ ++ +LH
Sbjct: 925 TPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLH 984
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR 436
+LRPFLLRR+K DVE+ LP K E ++ M+ Q+ ++ K + ++
Sbjct: 985 KVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQML-KYRRLFIGDQNNKKMV 1043
Query: 437 GMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVE---QIVEQCGKXXXXXXXXXXXX 493
G++G NN ++QL+K CNHP + E D P E I GK
Sbjct: 1044 GLRG-FNNQIMQLKKICNHPFVFEEV-EDQ-INPTRETNDDIWRVAGKFELLDRILPKLK 1100
Query: 494 XXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+VL+F Q T+I+DIME + + R+DG + DER ++ FN +S Y F+
Sbjct: 1101 ATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFI 1160
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
LSTRAGGLG+NL ADT I++D+DWNP DLQA DR HRIGQ V + RL T SVE
Sbjct: 1161 LSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEV 1220
Query: 614 ILKRAFSKLKLEHVVIGKGQFHQERT 639
IL+RA+ KL ++ VI G+F + T
Sbjct: 1221 ILERAYKKLDIDGKVIQAGKFDNKST 1246
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 973 (347.6 bits), Expect = 4.7e-98, Sum P(3) = 4.7e-98
Identities = 215/504 (42%), Positives = 305/504 (60%)
Query: 142 KEQ-RELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-K 199
KE E S L GGKL+ YQ+ G++WL+SL+ N LNGILAD+MGLGKT+Q I+ + +L +
Sbjct: 739 KENINEQPSSLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLICYLME 798
Query: 200 GNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFP 259
GP+LV+ P S L W +EI+ + PS+ I+Y G+ ER ++ ++ + + KF
Sbjct: 799 TKNDRGPFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFKEQI---VHQKFN 855
Query: 260 IVVTSYEVALSDA-RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTP 318
+++T+YE ++ R L +W Y+++DEGHR+KN CKL +LK+ ++LLLTGTP
Sbjct: 856 VLLTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTP 915
Query: 319 LQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEE--LEEKRRGQMVAKLH 376
LQNNL ELW+LL+F+LP+IF+S E+F WF+ + N E EE L E+ ++ +LH
Sbjct: 916 LQNNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSAEEALLSEEENLLIINRLH 975
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR 436
+LRPF+LRR+K VE LP K E ++ + +Q+ L+ K +E++L S G
Sbjct: 976 QVLRPFVLRRLKHKVENELPEKIERLIRCEASAYQK-----LLMKRVEDNLG----SIGN 1026
Query: 437 GMKGKLNNLMVQLRKNCNHPDL--LESAFSDSC----FYPPVEQIVEQCGKXXXXXXXXX 490
++N +++LR CNHP L L S ++ F PP IV CGK
Sbjct: 1027 AKSRAVHNSVMELRNICNHPYLSQLHSEEVNNIIPKHFLPP---IVRLCGKLEMLDRMLP 1083
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
+H+VL FS T++LD+ME Y KGY+ R+DG +R I FN S +
Sbjct: 1084 KLKATDHRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFF 1143
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
IFLLS RAGG+G+NL AADT IL+D+DWNPQ+DLQA R HRIGQ K V V R T SV
Sbjct: 1144 IFLLSIRAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSV 1203
Query: 611 EGRILKRAFSKLKLEHVVIGKGQF 634
E ++ A KL + + I G F
Sbjct: 1204 EEQVRASAEHKLGVANQSITAGFF 1227
Score = 45 (20.9 bits), Expect = 4.7e-98, Sum P(3) = 4.7e-98
Identities = 16/61 (26%), Positives = 27/61 (44%)
Query: 668 QTDI---GEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATGGMLSTLN 724
QTDI G D E V + D+ A PN ++ +G ++P G L +++
Sbjct: 2566 QTDIPLVGGIDPEHVQENVDVPAS--PHGAAPNIVIFQSEGHLSPSILPDDVAGQLESMS 2623
Query: 725 S 725
+
Sbjct: 2624 N 2624
Score = 41 (19.5 bits), Expect = 4.7e-98, Sum P(3) = 4.7e-98
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 139 RVDKEQRELVSLLTGGKLKSY 159
++DK QRE ++LL ++ Y
Sbjct: 633 KIDKIQREKINLLKINDVEGY 653
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 624 (224.7 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 610 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 667
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 668 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 724
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 725 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 783
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 784 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 836
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 837 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 890
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 891 INILMQLRKVCNHPNLFDPRPVTSPFITP 919
Score = 385 (140.6 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 73/166 (43%), Positives = 104/166 (62%)
Query: 469 YPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDG 528
+P + I CGK H+VL+F+Q T++LD++E + G+ R+DG
Sbjct: 2032 FPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDG 2091
Query: 529 SVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 588
S R+++R+ ++ FN + F+LSTR+GG+G+NLT ADT + YDSDWNP MD QA D
Sbjct: 2092 STRVEQRQALMERFN-ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQD 2150
Query: 589 RCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
RCHRIGQT+ VH+YRL + ++VE ILK+A K L + I G F
Sbjct: 2151 RCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2196
Score = 37 (18.1 bits), Expect = 8.0e-29, Sum P(3) = 8.0e-29
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 361 EELEEKRRGQMVAKLHAILR 380
+ LEEKR+ Q +L I +
Sbjct: 1887 DSLEEKRKRQRSERLERIFQ 1906
Score = 37 (18.1 bits), Expect = 8.0e-29, Sum P(3) = 8.0e-29
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 301 KELKYIPIGNKLLLTGTPLQ 320
K L + GNKL LTG ++
Sbjct: 1205 KPLTFQIQGNKLTLTGAQVR 1224
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 624 (224.7 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 617 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 674
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 675 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 731
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 732 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 790
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 791 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 843
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 844 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 897
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 898 INILMQLRKVCNHPNLFDPRPVTSPFITP 926
Score = 385 (140.6 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 73/166 (43%), Positives = 104/166 (62%)
Query: 469 YPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDG 528
+P + I CGK H+VL+F+Q T++LD++E + G+ R+DG
Sbjct: 2032 FPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDG 2091
Query: 529 SVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 588
S R+++R+ ++ FN + F+LSTR+GG+G+NLT ADT + YDSDWNP MD QA D
Sbjct: 2092 STRVEQRQALMERFN-ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQD 2150
Query: 589 RCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
RCHRIGQT+ VH+YRL + ++VE ILK+A K L + I G F
Sbjct: 2151 RCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2196
Score = 37 (18.1 bits), Expect = 8.0e-29, Sum P(3) = 8.0e-29
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 361 EELEEKRRGQMVAKLHAILR 380
+ LEEKR+ Q +L I +
Sbjct: 1887 DSLEEKRKQQRSERLERIFQ 1906
Score = 37 (18.1 bits), Expect = 8.0e-29, Sum P(3) = 8.0e-29
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 301 KELKYIPIGNKLLLTGTPLQ 320
K L + GNKL LTG ++
Sbjct: 1213 KPLTFQIQGNKLTLTGAQVR 1232
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 596 (214.9 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 134/337 (39%), Positives = 198/337 (58%)
Query: 139 RVDKEQRELVSL----LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAF 194
+V +EQ +V + L G L++YQ +G+ WL SL+ N NGILAD+MGLGKTIQTI+
Sbjct: 675 KVQEEQLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISL 734
Query: 195 LAHLKGNGLH-GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRK-HMPR 252
LA+L + GP+L++ P S L NW E RF P + Y+GS ++R E R+ + P
Sbjct: 735 LAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPD 794
Query: 253 AIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKL 312
A F + + SY++ + D + R W+Y+V+DE H +KN + + L +L
Sbjct: 795 A----FHVCIVSYQLVVQDQHSFKRK-RWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRL 849
Query: 313 LLTGTPLQNNLAELWSLLHFILPDI---------FSSLEEFQSWFDLSGKCNSEVMKEEL 363
LLTGTPLQNNLAELWSLL+F++P F+ L+ FQ WF E +
Sbjct: 850 LLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFG 909
Query: 364 EEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTL 423
++K + VAKLH +LRP+LLRR+K+DVE+ +P K E I+Y +++ QR D +++
Sbjct: 910 QDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQ 969
Query: 424 ENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLE 460
+ ++G M + N ++QLRK CNHP+L E
Sbjct: 970 T----KATLASGNFMS--IVNCLMQLRKVCNHPNLFE 1000
Score = 403 (146.9 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 79/194 (40%), Positives = 119/194 (61%)
Query: 444 NLMVQLRKNC---NHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVL 500
N +++ +NC ++P L + + +P + CGK H+ L
Sbjct: 1208 NTRLKVMQNCFEVSNP-LHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRAL 1266
Query: 501 VFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGG 560
+F+Q TK+LD++E + N GY R+DG+ ++++R+ + FN +S +F+LS+R+GG
Sbjct: 1267 IFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFN-TDSRITVFILSSRSGG 1325
Query: 561 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFS 620
LGINLT ADT I YDSDWNP MD Q DRCHRIGQT+ VH+YR + ++E ILK+A
Sbjct: 1326 LGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQ 1385
Query: 621 KLKLEHVVIGKGQF 634
K +L++VVI +G F
Sbjct: 1386 KRQLDNVVIQEGDF 1399
Score = 53 (23.7 bits), Expect = 1.5e-34, Sum P(2) = 1.5e-34
Identities = 32/137 (23%), Positives = 62/137 (45%)
Query: 330 LHFILPDIFSSLEEFQSWF-DLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
LH + P + SL E+ + F L E + ++E+RR ++++L + L+ K
Sbjct: 259 LHVVKPG-YESLHEYIASFKSLEDDLTLEEYNKYIDEQRR--LLSRLKKGIENGALKYDK 315
Query: 389 -SDVEQMLPRK--KEIILYA----TMTEHQRNFQ---DHLINKTLENHLREKVFSAGRGM 438
+D Q + K K II Y + Q++ Q DHLIN+ + H+ + S+ +
Sbjct: 316 ETDSLQPITSKEIKTIITYKPDPISYFYKQQDLQIHTDHLINQGI--HMSKLFRSSTKAR 373
Query: 439 KGKLNNLMVQLRKNCNH 455
+ + + ++ H
Sbjct: 374 IARAKKVSQMIEQHFKH 390
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 624 (224.7 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 618 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 675
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 676 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 732
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 733 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 791
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 792 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 844
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 845 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 898
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 899 INILMQLRKVCNHPNLFDPRPVTSPFITP 927
Score = 385 (140.6 bits), Expect = 5.4e-96, Sum P(2) = 5.4e-96
Identities = 73/166 (43%), Positives = 104/166 (62%)
Query: 469 YPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDG 528
+P + I CGK H+VL+F+Q T++LD++E + G+ R+DG
Sbjct: 2043 FPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDG 2102
Query: 529 SVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 588
S R+++R+ ++ FN + F+LSTR+GG+G+NLT ADT + YDSDWNP MD QA D
Sbjct: 2103 STRVEQRQALMERFN-ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQD 2161
Query: 589 RCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
RCHRIGQT+ VH+YRL + ++VE ILK+A K L + I G F
Sbjct: 2162 RCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2207
Score = 37 (18.1 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 361 EELEEKRRGQMVAKLHAILR 380
+ LEEKR+ Q +L I +
Sbjct: 1898 DSLEEKRKRQRSERLERIFQ 1917
Score = 37 (18.1 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 301 KELKYIPIGNKLLLTGTPLQ 320
K L + GNKL LTG ++
Sbjct: 1213 KPLTFQIQGNKLTLTGAQVR 1232
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 624 (224.7 bits), Expect = 6.6e-96, Sum P(3) = 6.6e-96
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 620 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 677
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 678 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 734
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 735 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 793
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 794 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 846
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 847 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 900
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 901 INILMQLRKVCNHPNLFDPRPVTSPFITP 929
Score = 376 (137.4 bits), Expect = 6.6e-96, Sum P(3) = 6.6e-96
Identities = 73/167 (43%), Positives = 104/167 (62%)
Query: 469 YPPVEQIVEQC-GKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRID 527
+P + I C GK H+VL+F+Q T++LD++E + G+ R+D
Sbjct: 2019 FPDLRLIQYDCAGKLQTLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLD 2078
Query: 528 GSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 587
GS R+++R+ ++ FN + F+LSTR+GG+G+NLT ADT + YDSDWNP MD QA
Sbjct: 2079 GSTRVEQRQALMERFN-ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQ 2137
Query: 588 DRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
DRCHRIGQT+ VH+YRL + ++VE ILK+A K L + I G F
Sbjct: 2138 DRCHRIGQTRDVHIYRLISERTVEENILKKANQKRMLGDMAIEGGNF 2184
Score = 39 (18.8 bits), Expect = 6.6e-96, Sum P(3) = 6.6e-96
Identities = 14/50 (28%), Positives = 21/50 (42%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESE 89
+EN+ E+ DL+ + +TQ E E+ T N E E E
Sbjct: 367 EENIE--EEPSQDLEVDPPSSSVTQCNKQCWHPDEDDEEFTANEDEAEDE 414
Score = 39 (18.8 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 251 PRAIGPKFPIVVTSYEVA 268
PR+ GP PI T E A
Sbjct: 1925 PRSPGPSHPIFWTYTEAA 1942
Score = 37 (18.1 bits), Expect = 6.7e-29, Sum P(2) = 6.7e-29
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 446 MVQLRKNCNHPDLLESAFS 464
+ Q K C HPD + F+
Sbjct: 387 VTQCNKQCWHPDEDDEEFT 405
Score = 37 (18.1 bits), Expect = 2.6e-27, Sum P(4) = 2.6e-27
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 361 EELEEKRRGQMVAKLHAILR 380
+ LEEKR+ Q +L I +
Sbjct: 1874 DSLEEKRKQQRSERLERIFQ 1893
Score = 37 (18.1 bits), Expect = 2.6e-27, Sum P(4) = 2.6e-27
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 301 KELKYIPIGNKLLLTGTPLQ 320
K L + GNKL LTG ++
Sbjct: 1215 KPLTFQIQGNKLTLTGAQVR 1234
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 744 (267.0 bits), Expect = 7.3e-96, Sum P(3) = 7.3e-96
Identities = 164/413 (39%), Positives = 255/413 (61%)
Query: 140 VDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK 199
V KE+ + S+L GG+L YQL+G++WL+SL+ N L+GILAD+MGLGKTIQTI+ A+LK
Sbjct: 868 VVKEKVKQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLK 927
Query: 200 G--NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
N ++ L+I PLSTL NW++E +R+ PS++ I Y G+K ER I +K + +
Sbjct: 928 EFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKKLLEQT---- 983
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGT 317
F I +T++++ + + + +L +W Y+VVDEGHR+KN K + L ++LLTGT
Sbjct: 984 FDICITTFDLVIKE-KSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGT 1042
Query: 318 PLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
PLQNNL+ELWSLL+F+LP IFSS +F+ WF + N + + E + E+ + ++ +LH+
Sbjct: 1043 PLQNNLSELWSLLNFLLPKIFSSCVDFEKWF-VKSLHNEKDVYEHITEEEQLLIINRLHS 1101
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRG 437
+L PF+LRR+K DV + LP+K E ++ ++ +Q+ ++ K ++ ++V G
Sbjct: 1102 VLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQK-----ILYKQIQTKGFKQVNHNGSI 1156
Query: 438 MKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNH 497
N+++QLRK NHP L D Y E I++ GK H
Sbjct: 1157 TTKIFQNIVMQLRKIVNHPYLF---LYD---YNIDENIIKCSGKFEVLDRMLPKLLKFKH 1210
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
KVL+FSQ TK+++I+ Y +GY+ R+DG++ L ERK+ I FN+ N Y+
Sbjct: 1211 KVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFNN-NVEYK 1262
Score = 242 (90.2 bits), Expect = 7.3e-96, Sum P(3) = 7.3e-96
Identities = 54/117 (46%), Positives = 71/117 (60%)
Query: 529 SVRLDE-RKRQIQDF--------NDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWN 579
SV++ E +K +I DF N N IF+LSTR+G LG+NL ADT I++DSD+N
Sbjct: 1374 SVKISELKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFN 1433
Query: 580 PQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQ 636
P D+QAM RCHRIGQ V V+R T VE + K+A KL + VI G F++
Sbjct: 1434 PHQDIQAMCRCHRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNK 1490
Score = 42 (19.8 bits), Expect = 7.3e-96, Sum P(3) = 7.3e-96
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 140 VDKEQRELVSLLTGGKLKSYQLKGVK 165
++KE+RE + LL +++Y +K +K
Sbjct: 726 LEKEERERMKLLKDNDIEAY-MKLIK 750
Score = 40 (19.1 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREK 430
+L R+ K D E KKE ++ D + NK +N+ EK
Sbjct: 115 YLKRKKKKDKENKSKSKKE-------KNNKNEKDDEMENKKEKNNKNEK 156
Score = 39 (18.8 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 413 NFQDHLINKTLENHLRE-KVFSAGRGMKGKLNNLMVQLRKNCNHPDLL 459
N + +N E+ +E K G K + N ++ + KN N D L
Sbjct: 3 NSDNKCMNDNKESIPKEYKTQDMIEGEKERKNKIIKEYIKNMNEEDFL 50
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 744 (267.0 bits), Expect = 7.3e-96, Sum P(3) = 7.3e-96
Identities = 164/413 (39%), Positives = 255/413 (61%)
Query: 140 VDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK 199
V KE+ + S+L GG+L YQL+G++WL+SL+ N L+GILAD+MGLGKTIQTI+ A+LK
Sbjct: 868 VVKEKVKQPSILIGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTISLFAYLK 927
Query: 200 G--NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK 257
N ++ L+I PLSTL NW++E +R+ PS++ I Y G+K ER I +K + +
Sbjct: 928 EFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNKLERKHIAKKLLEQT---- 983
Query: 258 FPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGT 317
F I +T++++ + + + +L +W Y+VVDEGHR+KN K + L ++LLTGT
Sbjct: 984 FDICITTFDLVIKE-KSFLMKISWNYIVVDEGHRMKNNKSRFHVFLSEFKSKYRILLTGT 1042
Query: 318 PLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
PLQNNL+ELWSLL+F+LP IFSS +F+ WF + N + + E + E+ + ++ +LH+
Sbjct: 1043 PLQNNLSELWSLLNFLLPKIFSSCVDFEKWF-VKSLHNEKDVYEHITEEEQLLIINRLHS 1101
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRG 437
+L PF+LRR+K DV + LP+K E ++ ++ +Q+ ++ K ++ ++V G
Sbjct: 1102 VLLPFMLRRVKKDVLKSLPKKYEYNIHIELSLYQK-----ILYKQIQTKGFKQVNHNGSI 1156
Query: 438 MKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNH 497
N+++QLRK NHP L D Y E I++ GK H
Sbjct: 1157 TTKIFQNIVMQLRKIVNHPYLF---LYD---YNIDENIIKCSGKFEVLDRMLPKLLKFKH 1210
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
KVL+FSQ TK+++I+ Y +GY+ R+DG++ L ERK+ I FN+ N Y+
Sbjct: 1211 KVLIFSQMTKLMNILCDYLEFRGYKYHRLDGNIGLQERKKIIDQFNN-NVEYK 1262
Score = 242 (90.2 bits), Expect = 7.3e-96, Sum P(3) = 7.3e-96
Identities = 54/117 (46%), Positives = 71/117 (60%)
Query: 529 SVRLDE-RKRQIQDF--------NDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWN 579
SV++ E +K +I DF N N IF+LSTR+G LG+NL ADT I++DSD+N
Sbjct: 1374 SVKISELKKEEINDFQIMDDKNVNGGNQDAMIFILSTRSGSLGLNLQTADTVIIFDSDFN 1433
Query: 580 PQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQ 636
P D+QAM RCHRIGQ V V+R T VE + K+A KL + VI G F++
Sbjct: 1434 PHQDIQAMCRCHRIGQKNVVKVFRFITLSGVEELVFKKAQHKLSINDKVIQAGLFNK 1490
Score = 42 (19.8 bits), Expect = 7.3e-96, Sum P(3) = 7.3e-96
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 140 VDKEQRELVSLLTGGKLKSYQLKGVK 165
++KE+RE + LL +++Y +K +K
Sbjct: 726 LEKEERERMKLLKDNDIEAY-MKLIK 750
Score = 40 (19.1 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 14/49 (28%), Positives = 21/49 (42%)
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREK 430
+L R+ K D E KKE ++ D + NK +N+ EK
Sbjct: 115 YLKRKKKKDKENKSKSKKE-------KNNKNEKDDEMENKKEKNNKNEK 156
Score = 39 (18.8 bits), Expect = 8.0e-15, Sum P(2) = 8.0e-15
Identities = 13/48 (27%), Positives = 21/48 (43%)
Query: 413 NFQDHLINKTLENHLRE-KVFSAGRGMKGKLNNLMVQLRKNCNHPDLL 459
N + +N E+ +E K G K + N ++ + KN N D L
Sbjct: 3 NSDNKCMNDNKESIPKEYKTQDMIEGEKERKNKIIKEYIKNMNEEDFL 50
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 603 (217.3 bits), Expect = 9.6e-96, Sum P(3) = 9.6e-96
Identities = 129/319 (40%), Positives = 190/319 (59%)
Query: 145 RELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGL 203
R V L L+ YQ G+ WL+SL++ LNGILAD+MGLGKTI TI+ +A+L G+
Sbjct: 770 RTKVPFLLKFPLREYQHIGLDWLVSLYEKNLNGILADEMGLGKTIMTISLIAYLAVQKGV 829
Query: 204 HGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP+L++ P S L NW E R+ P + YHG+ ++R + RK ++ F + +T
Sbjct: 830 WGPHLIVVPSSVLFNWEMEFKRWCPGLKIFTYHGTSRDR-KANRKGWSKSNA--FHVCIT 886
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY + +SD R W Y+++DE H +KN K + + + + +LLLTGTPLQNNL
Sbjct: 887 SYSMVMSD-HLIFRRKKWVYMILDEAHVIKNFKTQRWQNMLHFNTERRLLLTGTPLQNNL 945
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
ELWSL+HF++PDIF S EFQ WF ++G +++ E ++ +LHA+LRP
Sbjct: 946 MELWSLMHFLMPDIFQSHREFQDWFSNPVTGMIEGG---DDVNE----DIINRLHAVLRP 998
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
FLLRR+K DVE+ +P K I+ +M+ Q+ + IN + + S+G
Sbjct: 999 FLLRRLKKDVEKQMPPKHTHIVPCSMSRRQKFLYEEFINSSST----QSTLSSGSFFS-- 1052
Query: 442 LNNLMVQLRKNCNHPDLLE 460
+ N+++QLRK CNHPDL E
Sbjct: 1053 IINILMQLRKVCNHPDLFE 1071
Score = 388 (141.6 bits), Expect = 9.6e-96, Sum P(3) = 9.6e-96
Identities = 74/167 (44%), Positives = 104/167 (62%)
Query: 468 FYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRID 527
++P I CGK H+ L+F+Q TK+LDI E + N Y R+D
Sbjct: 1367 YFPDKRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNLHAYTYLRLD 1426
Query: 528 GSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 587
GS ++D+R+ + FN + +F+LSTR+GGLG+NLT ADT I YD+DWNP MD QA
Sbjct: 1427 GSTKIDKRQVLTERFN-TDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWNPSMDAQAQ 1485
Query: 588 DRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
DRCHRIGQT+ V++YR T ++E ILK++ K +L+ +VI G+F
Sbjct: 1486 DRCHRIGQTREVNIYRFITQHTIEENILKKSNQKRQLDKMVIKAGEF 1532
Score = 46 (21.3 bits), Expect = 9.6e-96, Sum P(3) = 9.6e-96
Identities = 11/43 (25%), Positives = 27/43 (62%)
Query: 37 NVEQENVSKNEDHLNDLQFNK--LDELLTQTQMYAEFLLEKME 77
++ +N+++ ED + +K L+EL +++M + LL+K++
Sbjct: 666 DLSDDNINEEEDDDGEQLESKEYLEELKLESEMPLDELLKKLD 708
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 648 (233.2 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 131/278 (47%), Positives = 193/278 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 294
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 295 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVRDFKSTNRLLLTGTPLQNNLHEL 353
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S E+F SWFD C L +++ +V +LH +L+PFLLRR
Sbjct: 354 WALLNFLLPDVFNSAEDFDSWFDTKN-C--------LGDQK---LVERLHTVLKPFLLRR 401
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Score = 314 (115.6 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 63/101 (62%), Positives = 79/101 (78%)
Query: 539 IQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKP 598
I+ FN NSS IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KP
Sbjct: 565 IEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKP 624
Query: 599 VHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
V V+RL T +VE RI++RA KL+L+ +VI +G+ +++
Sbjct: 625 VRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQS 665
Score = 310 (114.2 bits), Expect = 1.8e-51, Sum P(3) = 1.8e-51
Identities = 69/181 (38%), Positives = 106/181 (58%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 385 KLVERLHTVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID----- 439
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y E IV GK
Sbjct: 440 VLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLL 498
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y +GYE CR+DG +ER+ ++DF + Y
Sbjct: 499 AKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEILKDFKIIFHEY 558
Query: 550 R 550
+
Sbjct: 559 Q 559
Score = 42 (19.8 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
Identities = 9/34 (26%), Positives = 20/34 (58%)
Query: 39 EQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFL 72
E+E + E+ + + + + LL QT+++A F+
Sbjct: 79 EKEMDPEYEEKMKADRAKRFEFLLKQTELFAHFI 112
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 587 (211.7 bits), Expect = 6.2e-95, Sum P(2) = 6.2e-95
Identities = 130/323 (40%), Positives = 195/323 (60%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH-GP 206
V L G L+ YQ G++WL +L + NGILAD+MGLGKTIQTIA LAHL + GP
Sbjct: 439 VPFLFRGTLREYQQYGLEWLTALHDSNTNGILADEMGLGKTIQTIALLAHLACEKENWGP 498
Query: 207 YLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRK-HMPRAIGPKFPIVVTSY 265
+L+I P S + NW E +F+P + Y+G+ +ER E R + P + + +TSY
Sbjct: 499 HLIIVPTSVMLNWEMEFKKFLPGFKILTYYGNPQERKEKRSGWYKPDT----WHVCITSY 554
Query: 266 EVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAE 325
++ L D + + R W+Y+++DE H +KN + + + L ++LLLTGTPLQNNL E
Sbjct: 555 QLVLQDHQPF-RRKKWQYMILDEAHNIKNFRSQRWQSLLNFNAEHRLLLTGTPLQNNLVE 613
Query: 326 LWSLLHFILP-------DIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQ-MVAKLHA 377
LWSLL+F++P F++L++FQ WF K +++E + VAKLH
Sbjct: 614 LWSLLYFLMPAGVTQNNSAFANLKDFQDWFS---KPMDRLIEEGQDMNPEAMNTVAKLHR 670
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRG 437
+LRP+LLRR+K++VE+ +P K E ++Y +++ QR D IN+ RE + ++G
Sbjct: 671 VLRPYLLRRLKTEVEKQMPAKYEHVVYCQLSKRQRFLYDDFINRA---RTRE-ILASGNF 726
Query: 438 MKGKLNNLMVQLRKNCNHPDLLE 460
M + N ++QLRK CNHP+L E
Sbjct: 727 MS--IINCLMQLRKVCNHPNLHE 747
Score = 399 (145.5 bits), Expect = 6.2e-95, Sum P(2) = 6.2e-95
Identities = 76/169 (44%), Positives = 108/169 (63%)
Query: 469 YPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDG 528
+P + CGK H+VL+F+Q TK+LDI+E + N G+ R+DG
Sbjct: 980 FPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVLDILEQFLNIHGHRYLRLDG 1039
Query: 529 SVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 588
+ ++++R+ + FN+ + +F+LSTR+GGLGINLT ADT I YDSDWNPQ+D QA D
Sbjct: 1040 ATKIEQRQILTERFNN-DDKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPQLDAQAQD 1098
Query: 589 RCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQE 637
R HRIGQT+ VH+YRL + +VE +L+RA K L+ +VI G+F E
Sbjct: 1099 RSHRIGQTRDVHIYRLISEYTVESNMLRRANQKRMLDKIVIQGGEFTTE 1147
Score = 43 (20.2 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 11/33 (33%), Positives = 17/33 (51%)
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKE 302
SD + +R K LV GH + PK + L++
Sbjct: 23 SDLKVRVRFREPKLLVTHSGHITEQPKYEHLEQ 55
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 218/494 (44%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 36 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 95
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 96 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 154
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 155 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 213
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 214 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 258
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 259 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 314
Query: 447 VQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++C P ++ +V GK
Sbjct: 315 MELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 374
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 375 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 434
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 435 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 494
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 495 DKASLKLGLDKAVL 508
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 936 (334.5 bits), Expect = 7.5e-94, Sum P(2) = 7.5e-94
Identities = 218/494 (44%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 427 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 486
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 487 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 545
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 546 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 604
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 605 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 649
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 650 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 705
Query: 447 VQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++C P ++ +V GK
Sbjct: 706 MELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 765
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 766 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 825
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 826 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 885
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 886 DKASLKLGLDKAVL 899
Score = 45 (20.9 bits), Expect = 7.5e-94, Sum P(2) = 7.5e-94
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +D++ G D++ + PL+GP
Sbjct: 1290 RVLDNFSDIVEGVDFDKDCEDPEYKPLQGP 1319
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 936 (334.5 bits), Expect = 9.1e-94, Sum P(2) = 9.1e-94
Identities = 218/494 (44%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 869
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 870 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 929 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 1032
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 1033 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 1088
Query: 447 VQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++C P ++ +V GK
Sbjct: 1089 MELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAG 1148
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1149 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1208
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 1209 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1268
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1269 DKASLKLGLDKAVL 1282
Score = 47 (21.6 bits), Expect = 9.1e-94, Sum P(2) = 9.1e-94
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +DL+ G D++ + PL+GP
Sbjct: 1673 RVLDNFSDLVEGIDFDKDCEDPEYKPLQGP 1702
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 936 (334.5 bits), Expect = 9.1e-94, Sum P(2) = 9.1e-94
Identities = 218/494 (44%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 871
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 872 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 930
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 931 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 989
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 990 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 1034
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 1035 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 1090
Query: 447 VQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++C P ++ +V GK
Sbjct: 1091 MELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDKLLPKLKAG 1150
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1151 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1210
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 1211 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1270
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1271 DKASLKLGLDKAVL 1284
Score = 47 (21.6 bits), Expect = 9.1e-94, Sum P(2) = 9.1e-94
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +DL+ G D++ + PL+GP
Sbjct: 1675 RVLDNFSDLVEGIDFDKDCEDPEYKPLQGP 1704
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 936 (334.5 bits), Expect = 1.5e-93, Sum P(2) = 1.5e-93
Identities = 218/494 (44%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 869
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 870 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 929 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 1032
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 1033 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 1088
Query: 447 VQLRKNCNHPDLLESA-------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++C P ++ +V GK
Sbjct: 1089 MELRKCCNHPYLINGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKAG 1148
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1149 GHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1208
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 1209 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 1268
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1269 DKASLKLGLDKAVL 1282
Score = 45 (20.9 bits), Expect = 1.5e-93, Sum P(2) = 1.5e-93
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +D++ G D++ + PL+GP
Sbjct: 1673 RVLDNFSDIVEGVDFDKDCEDPEYKPLQGP 1702
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 641 (230.7 bits), Expect = 2.9e-93, Sum P(2) = 2.9e-93
Identities = 130/268 (48%), Positives = 189/268 (70%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 176 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 235
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 236 MVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 291
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 292 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 350
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 351 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 398
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNF 414
+K+DVE+ LP KKEI +Y +++ QR +
Sbjct: 399 IKTDVEKSLPPKKEIKVYLGLSKMQREW 426
Score = 322 (118.4 bits), Expect = 2.9e-93, Sum P(2) = 2.9e-93
Identities = 70/150 (46%), Positives = 96/150 (64%)
Query: 535 RKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIG 594
+K I+ FN NSS IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIG
Sbjct: 558 KKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIG 617
Query: 595 QTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXX 654
Q KPV V+RL T +VE RI++RA KL+L+ +VI +G+ ++ SN +
Sbjct: 618 QKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQ--SNKLAKEEMLQMIR 675
Query: 655 XXXXXXXXXXKMIQTDIGEEDLERVLDRAD 684
++++ +ED+ +L+R +
Sbjct: 676 HGATHVFASK---ESELTDEDITTLLERGE 702
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 606 (218.4 bits), Expect = 4.4e-93, Sum P(2) = 4.4e-93
Identities = 127/317 (40%), Positives = 197/317 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGP 206
V L G+L+ YQ+ G+ W+++L++ LNGILAD+MGLGKTIQTI+ LAH+ + GP
Sbjct: 550 VPFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGP 609
Query: 207 YLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM-PRAIGPKFPIVVTSY 265
+L++ P S + NW E ++ P++ + Y G+ KER E R+ M P F + +TSY
Sbjct: 610 HLIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNC----FHVCITSY 665
Query: 266 EVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAE 325
+ D R + + W+YL++DE +KN K + + L + +LLLTGTPLQN+L E
Sbjct: 666 KTVTQDIRAF-KQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLME 724
Query: 326 LWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
LWSL+HF++P IFSS ++F+ WF L+G +M+ +E ++ +LH +LRPF+
Sbjct: 725 LWSLMHFLMPTIFSSHDDFKDWFSNPLTG-----MMEGNMEFN--APLIGRLHKVLRPFI 777
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN 443
LRR+K +VE+ LP K E I+ ++++ QR D +++ +E + S M LN
Sbjct: 778 LRRLKKEVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSR---RSTKENLKSGN--MMSVLN 832
Query: 444 NLMVQLRKNCNHPDLLE 460
+++QLRK CNHP+L E
Sbjct: 833 -IVMQLRKCCNHPNLFE 848
Score = 372 (136.0 bits), Expect = 4.4e-93, Sum P(2) = 4.4e-93
Identities = 74/202 (36%), Positives = 119/202 (58%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVL 500
+LN+ + L + N + + S + +P + I CGK H+ L
Sbjct: 1151 ELNSRSLLLNTSTNFDTRM--SISRALQFPELRLIEYDCGKLQTLAVLLRQLYLYKHRCL 1208
Query: 501 VFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGG 560
+F+Q +K+LD+++ + + GY+ R+DG+ +++R+ ++ FN + F+LSTR+GG
Sbjct: 1209 IFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFN-ADPKVFCFILSTRSGG 1267
Query: 561 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFS 620
+G+NLT ADT I YDSDWNP MD QA DRCHRIGQT+ V +YRL + +++E IL++A
Sbjct: 1268 VGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRKATQ 1327
Query: 621 KLKLEHVVIGKGQFHQERTKSN 642
K +L + I + F E K +
Sbjct: 1328 KRRLGELAIDEAGFTPEFFKQS 1349
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 931 (332.8 bits), Expect = 4.7e-93, Sum P(2) = 4.7e-93
Identities = 217/495 (43%), Positives = 294/495 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 763 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 822
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 823 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 881
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 882 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 940
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 941 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 985
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 986 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 1041
Query: 447 VQLRKNCNHPDLLESA--------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXX 494
++LRK CNHP L+ + F ++C P ++ +V GK
Sbjct: 1042 MELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1101
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1102 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1161
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 1162 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1221
Query: 615 LKRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1222 FDKASLKLGLDKAVL 1236
Score = 45 (20.9 bits), Expect = 4.7e-93, Sum P(2) = 4.7e-93
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +D++ G D++ + PL+GP
Sbjct: 1627 RVLDNFSDIVEGVDFDKDCEDPEYKPLQGP 1656
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 931 (332.8 bits), Expect = 4.9e-93, Sum P(2) = 4.9e-93
Identities = 217/495 (43%), Positives = 294/495 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 869
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 870 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 929 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 1032
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 1033 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 1088
Query: 447 VQLRKNCNHPDLLESA--------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXX 494
++LRK CNHP L+ + F ++C P ++ +V GK
Sbjct: 1089 MELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1148
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1149 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1208
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 1209 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1268
Query: 615 LKRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1269 FDKASLKLGLDKAVL 1283
Score = 45 (20.9 bits), Expect = 4.9e-93, Sum P(2) = 4.9e-93
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +D++ G D++ + PL+GP
Sbjct: 1674 RVLDNFSDIVEGVDFDKDCEDPEYKPLQGP 1703
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 931 (332.8 bits), Expect = 5.1e-93, Sum P(2) = 5.1e-93
Identities = 217/495 (43%), Positives = 294/495 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IAFL + G+HGP+LVIAPLS
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVGIHGPFLVIAPLS 869
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYE 266
T++NW E + + ++ I+YHGS R I++ M R I G KF ++T++E
Sbjct: 870 TITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFE 928
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN + EL
Sbjct: 929 MILSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEEL 987
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S EF F G +E + V KL AIL+P +LRR
Sbjct: 988 FSLLHFLEPSQFPSESEFLKDF---GDLKTE------------EQVQKLQAILKPMMLRR 1032
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG L N M
Sbjct: 1033 LKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGHTNMPNLLNTM 1088
Query: 447 VQLRKNCNHPDLLESA--------FSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXX 494
++LRK CNHP L+ + F ++C P ++ +V GK
Sbjct: 1089 MELRKCCNHPYLINAGAEEKILTEFREACHIIPHDFHLQAMVRSAGKLVLIDKLLPKLKA 1148
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1149 GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLL 1208
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 1209 CTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREM 1268
Query: 615 LKRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1269 FDKASLKLGLDKAVL 1283
Score = 45 (20.9 bits), Expect = 5.1e-93, Sum P(2) = 5.1e-93
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 678 RVLDR-ADLIAGCLDDEEKPNAAVYPLKGP 706
RVLD +D++ G D++ + PL+GP
Sbjct: 1676 RVLDNFSDIVEGVDFDKDCEDPEYKPLQGP 1705
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 592 (213.5 bits), Expect = 6.1e-93, Sum P(2) = 6.1e-93
Identities = 127/330 (38%), Positives = 200/330 (60%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLV 209
L G L+ YQ G+ WL L+ N +NGILAD+MGLGKTIQTIA LAHL +G+ GP+LV
Sbjct: 820 LLRGTLREYQHFGLDWLAGLYSNHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLV 879
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 269
+ P S + NW E ++ P + Y+G+++ER + RR M + +++TSY++ L
Sbjct: 880 VVPTSVILNWEMEFKKWCPGFKIMTYYGNQEERRQKRRGWMD---DNSWNVLITSYQLVL 936
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D ++ L+ +W Y+++DE H +KN + + + L +LLLTGTPLQNNL ELWSL
Sbjct: 937 QD-QQVLKRRSWHYMILDEAHNIKNFRSQRWQALLTFRTRARLLLTGTPLQNNLTELWSL 995
Query: 330 LHFILP--------DIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
L F++P + F+ L F WF + E +E ++++ + Q+V KLH +LRP
Sbjct: 996 LFFLMPTDGDEAGIEGFADLRNFSEWFRRPVEQILEHGRETMDDEAK-QVVTKLHTVLRP 1054
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
++LRR+K+DVE+ +P K E ++Y +++ QR D +++ ++ ++G +
Sbjct: 1055 YILRRLKADVEKQMPGKYEHVVYCRLSKRQRYLYDGFMSRAQT----KETLASGNYLS-- 1108
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
+ N ++QLRK CNHPDL E+ + F P
Sbjct: 1109 IINCLMQLRKVCNHPDLFETRPISTSFAMP 1138
Score = 380 (138.8 bits), Expect = 6.1e-93, Sum P(2) = 6.1e-93
Identities = 74/180 (41%), Positives = 106/180 (58%)
Query: 455 HPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEY 514
H E+ S +P + CGK H+ L+F+Q TK+LD++E
Sbjct: 1348 HDPFHEAQMRLSIAFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQ 1407
Query: 515 YFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILY 574
+ N G+ R+DG+ ++++R+ FN+ N F+LS+R+GGLGINLT ADT I Y
Sbjct: 1408 FLNIHGHRYLRLDGTTKVEQRQILTDRFNNDNRILA-FILSSRSGGLGINLTGADTVIFY 1466
Query: 575 DSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
D DWNP MD Q DRCHRIGQT+ VH+YR + ++E IL++A K L+ VVI +G+F
Sbjct: 1467 DLDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEYTIESNILRKANQKRMLDDVVIQEGEF 1526
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 572 (206.4 bits), Expect = 2.7e-92, Sum P(3) = 2.7e-92
Identities = 122/317 (38%), Positives = 191/317 (60%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGP 206
V L L+ YQ G+ WL+++ + LNGILAD+MGLGKTIQTIA LAHL G GP
Sbjct: 906 VPFLLKHSLREYQHIGLDWLVTMNERKLNGILADEMGLGKTIQTIALLAHLACAKGNWGP 965
Query: 207 YLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYE 266
+L++ P S + NW E ++ P + Y+GS+KER +++R + F + +TSY+
Sbjct: 966 HLIVVPSSVMLNWEMEFKKWCPGFKILTYYGSQKER-KLKRVGWTKPNA--FHVCITSYK 1022
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + D + + R WKYL++DE +KN K + + L +LLLTGTPLQN+L EL
Sbjct: 1023 LVVQDQQSF-RRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRLLLTGTPLQNDLMEL 1081
Query: 327 WSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
WSL+HF++P +FSS EF+ WF ++G + E E ++ +LH ++RPFLL
Sbjct: 1082 WSLMHFLMPYVFSSHREFKEWFSNPMTGMIEGNM---EYNET----LITRLHKVIRPFLL 1134
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K +VE+ +P+K E ++ ++ QR + +++ RE + G + + N
Sbjct: 1135 RRLKKEVEKQMPKKYEHVITCRLSNRQRYLYEDFMSRA---KTRETL-QTGNLLS--VIN 1188
Query: 445 LMVQLRKNCNHPDLLES 461
+++QLRK CNHP++ E+
Sbjct: 1189 VLMQLRKVCNHPNMFEA 1205
Score = 394 (143.8 bits), Expect = 2.7e-92, Sum P(3) = 2.7e-92
Identities = 79/176 (44%), Positives = 108/176 (61%)
Query: 469 YPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDG 528
+P I CGK H+VL+F+Q TK+LD++E + N G+ R+DG
Sbjct: 1647 FPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIFTQMTKMLDVLEAFLNYHGHIYLRLDG 1706
Query: 529 SVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMD 588
S R+++R+ ++ FN + F+LSTR+GG+GINLT ADT I YDSDWNP MD QA D
Sbjct: 1707 STRVEQRQILMERFNGDKRIF-CFILSTRSGGVGINLTGADTVIFYDSDWNPTMDAQAQD 1765
Query: 589 RCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCI 644
RCHRIGQT+ VH+YRL + +++E ILK+A K L + I G F KS+ I
Sbjct: 1766 RCHRIGQTRDVHIYRLVSERTIEVNILKKANQKRMLSDMAIEGGNFTTTYFKSSTI 1821
Score = 39 (18.8 bits), Expect = 2.7e-92, Sum P(3) = 2.7e-92
Identities = 9/37 (24%), Positives = 19/37 (51%)
Query: 39 EQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEK 75
+QE + DH ++ + D L+ Q+ A++ E+
Sbjct: 753 KQEEAEQEIDHKKEIDELEADNDLSVEQLLAKYKSEQ 789
Score = 38 (18.4 bits), Expect = 3.5e-92, Sum P(3) = 3.5e-92
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 38 VEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKM 76
VE ++ +K E+ L ++ QT+ +++ L+E M
Sbjct: 596 VEYKHQTKIEEKRKQALDQHLSFIVDQTEKFSQQLVEGM 634
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 890 (318.4 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 211/498 (42%), Positives = 289/498 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 383 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 442
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R I G +F ++T+
Sbjct: 443 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 501
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 502 FEMILGGCGE-LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 560
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 561 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 605
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N
Sbjct: 606 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGQTNVPNLVN 661
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F D+ Y P ++ +++ GK
Sbjct: 662 TMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPAASDFHLQAMIQSAGKLVLIDKLLPK 719
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 720 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 779
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E
Sbjct: 780 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYE 839
Query: 612 GRILKRAFSKLKLEHVVI 629
+ RA KL L+ V+
Sbjct: 840 REMFDRASLKLGLDKAVL 857
Score = 44 (20.5 bits), Expect = 8.9e-92, Sum P(2) = 8.9e-92
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E D+E ++ RA L+A CL +KG W+++ PT G
Sbjct: 1049 LNEHDVE-IICRA-LLAYCLVHYRGDEK----IKGFIWDLITPTEDG 1089
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 923 (330.0 bits), Expect = 3.2e-91, P = 3.2e-91
Identities = 217/496 (43%), Positives = 293/496 (59%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+LVIAP
Sbjct: 752 GNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAP 811
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ I+YHGS R I++ M R I G KF ++T+
Sbjct: 812 LSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITT 870
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ LSD + LR W+ +++DE HRLKN CKLL LK++ + +K+LLTGTPLQN +
Sbjct: 871 FEMVLSDCPE-LREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVE 929
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P FSS EF F G +E + V KL AIL+P +L
Sbjct: 930 ELFSLLHFLEPTQFSSEAEFLKDF---GDLKTE------------EQVQKLQAILKPMML 974
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N
Sbjct: 975 RRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLTK---GASQSNTPNLLN 1030
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSC-FYPP---VEQIVEQCGKXXXXXXXXXXXX 493
M++LRK CNHP L+ A F ++ PP V+ +V GK
Sbjct: 1031 TMMELRKCCNHPYLITGAEEKIISEFREATPVVPPDFHVQAMVRSSGKLVLIDKLLPKLR 1090
Query: 494 XXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FL
Sbjct: 1091 AGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRPDSDRFVFL 1150
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
L TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E
Sbjct: 1151 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYERE 1210
Query: 614 ILKRAFSKLKLEHVVI 629
+ +A KL L+ V+
Sbjct: 1211 MFDKASLKLGLDKAVL 1226
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 899 (321.5 bits), Expect = 3.5e-91, Sum P(2) = 3.5e-91
Identities = 212/494 (42%), Positives = 290/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 153 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 212
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 213 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 271
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 272 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 330
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 331 FSLLHFLEPGRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 375
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K K G+ L N M
Sbjct: 376 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA--FLSK--GGGQANVPNLLNTM 431
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 432 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 491
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 492 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLC 551
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 552 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 611
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 612 DKASLKLGLDKAVL 625
Score = 39 (18.8 bits), Expect = 3.5e-91, Sum P(2) = 3.5e-91
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 708 WEVVIPTATGGMLSTLN 724
W+++ PTA G + +N
Sbjct: 854 WDLITPTADGQTRALVN 870
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 910 (325.4 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 207/504 (41%), Positives = 304/504 (60%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLV 209
L GG L+ YQL+G+ +L++ W N N ILAD+MGLGKT+Q+++ L L+ + GP+LV
Sbjct: 620 LIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFLV 679
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM--PRAIG-P-KFPIVVTSY 265
+ PLSTL+NW E +++P ++ I+Y G++ R+ ++ + +G P KF ++T+Y
Sbjct: 680 VVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNALLTTY 739
Query: 266 EVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAE 325
EV L D + L W YL+VDE HRLKN + +L L NKLL+TGTPLQN++ E
Sbjct: 740 EVVLKD-KAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNSVEE 798
Query: 326 LWSLLHFILPDIFSSLEEF-QSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
LW+LLHF+ P F + +EF +++ +LS SE+ A LH LRP +L
Sbjct: 799 LWALLHFLDPGKFKNKDEFVENYKNLSSFNESEL--------------ANLHLELRPHIL 844
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+ DVE+ LP K E IL M+ Q+ + ++ + + L + V RG + L N
Sbjct: 845 RRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHD-LNKGV----RGNQVSLLN 899
Query: 445 LMVQLRKNCNHPDLLESAF----SDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVL 500
++V+L+K CNHP L ESA D +++I+ GK H+VL
Sbjct: 900 IVVELKKCCNHPFLFESADHGYGGDINDNSKLDKIILSSGKLVILDKLLVRLRETKHRVL 959
Query: 501 VFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGG 560
+FSQ ++LDI+ Y + +G++ R+DGS + + R++ + FN S FLLSTRAGG
Sbjct: 960 IFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHFNAPASDDFCFLLSTRAGG 1019
Query: 561 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFS 620
LGINL ADT +++DSDWNPQ DLQAM R HRIGQ + V++YR T++SVE IL+RA
Sbjct: 1020 LGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEEILERAKR 1079
Query: 621 KLKLEHVVIGK----GQFHQERTK 640
K+ L+H+VI K G+ + TK
Sbjct: 1080 KMVLDHLVIQKLNAEGRLEKRETK 1103
Score = 37 (18.1 bits), Expect = 8.0e-91, Sum P(2) = 8.0e-91
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 38 VEQENVSKNEDHLNDLQFNK 57
++ EN + NE+ D + NK
Sbjct: 142 LDSENENDNENEEEDNEMNK 161
>UNIPROTKB|J9NZH0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:AAEX03026896
Ensembl:ENSCAFT00000048721 Uniprot:J9NZH0
Length = 850
Score = 517 (187.1 bits), Expect = 7.6e-90, Sum P(2) = 7.6e-90
Identities = 109/233 (46%), Positives = 159/233 (68%)
Query: 184 GLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKER 242
GLGKT+QTIA L +LK + GP++V+ P STL NW+NE R+VPS+ I + G K R
Sbjct: 3 GLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDAR 62
Query: 243 DE-IRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLK 301
IR + MP G ++ + VTSYE+ + + + + ++W+YLV+DE HR+KN K KL +
Sbjct: 63 AAFIRDEMMP---G-EWDVCVTSYEMVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSE 117
Query: 302 ELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKE 361
++ N+LLLTGTPLQNNL ELW+LL+F+LPD+F+S ++F SWFD C
Sbjct: 118 IVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKN-C------- 169
Query: 362 ELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNF 414
L +++ +V +LHA+L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR +
Sbjct: 170 -LGDQK---LVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREW 218
Score = 411 (149.7 bits), Expect = 7.6e-90, Sum P(2) = 7.6e-90
Identities = 118/323 (36%), Positives = 170/323 (52%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LHA+L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR + +I L + E
Sbjct: 174 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREW--FVI---LAFFISE 228
Query: 430 KVFSAGRGMKGKLNNLMVQLR--KNCNH----P--DLLESAFSDSCFYPPVEQIVEQCGK 481
++ + K + N+++ LR K C P DLL S S + IV K
Sbjct: 229 NSNNSNKNHKLDILNVIMLLREAKCCGASFCLPSLDLLPSTLS-------ISHIV--LFK 279
Query: 482 XXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQD 541
+ L L + Y + Y I G +K I+
Sbjct: 280 MTLFPGMKMILRQKSRCFLTSDSQFAFLSALPDYEHWPSYFYRSISGQYLFVYKKEAIEA 339
Query: 542 FNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV 601
FN NSS IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V
Sbjct: 340 FNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRV 399
Query: 602 YRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXX 661
+RL T +VE RI++RA KL+L+ +VI +G+ ++ SN +
Sbjct: 400 FRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQ--SNKLAKEEMLQMIRHGATHVF 457
Query: 662 XXXKMIQTDIGEEDLERVLDRAD 684
++++ +ED+ +L+R +
Sbjct: 458 ASK---ESELTDEDITTLLERGE 477
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 905 (323.6 bits), Expect = 8.0e-90, Sum P(2) = 8.0e-90
Identities = 213/494 (43%), Positives = 291/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 956 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1015
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 1016 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1074
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1075 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1133
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1134 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1178
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K L + G+ L N M
Sbjct: 1179 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF-TFLSK---GGGQANVPNLLNTM 1234
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F D+ P ++ +++ GK
Sbjct: 1235 MELRKCCNHPYLINGAEEKILEEFKDAHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1294
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1295 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1354
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 1355 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1414
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1415 DKASLKLGLDKAVL 1428
Score = 43 (20.2 bits), Expect = 8.0e-90, Sum P(2) = 8.0e-90
Identities = 16/52 (30%), Positives = 25/52 (48%)
Query: 673 EEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATGGMLSTLN 724
E D+E + RA L+ CL+ +K W+++ PTA G + LN
Sbjct: 1625 EHDVETIC-RAILVY-CLNHYRGDEN----IKSFIWDLITPTADGQTRALLN 1670
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 901 (322.2 bits), Expect = 1.3e-89, Sum P(2) = 1.3e-89
Identities = 212/494 (42%), Positives = 291/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 957 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1016
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 1017 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1075
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1076 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1134
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1135 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1179
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K L + G+ L N M
Sbjct: 1180 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF-TFLSK---GGGQANVPNLLNTM 1235
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 1236 MELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1295
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1296 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1355
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 1356 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1415
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1416 DKASLKLGLDKAVL 1429
Score = 45 (20.9 bits), Expect = 1.3e-89, Sum P(2) = 1.3e-89
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 673 EEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATGGMLSTLN 724
E+D+E + RA L+ CL+ +K W+++ PTA G + LN
Sbjct: 1626 EQDVETIC-RAILVY-CLNHYRGDEN----IKSFIWDLITPTADGQTRALLN 1671
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 903 (322.9 bits), Expect = 1.4e-89, Sum P(2) = 1.4e-89
Identities = 216/510 (42%), Positives = 294/510 (57%)
Query: 142 KEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN 201
K+ E G +L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+IA L+ +
Sbjct: 833 KKLDESTEYKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSA 892
Query: 202 GLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM-----PRAIGP 256
G+ P+++IAPLST++NW E S + ++AI+YHGS R I++ M + P
Sbjct: 893 GVQSPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIP 951
Query: 257 ---KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLL 313
KF ++T++E+ LSD + LR +W+ +V+DE HRLKN CKLL LK + I +K+L
Sbjct: 952 GAYKFDALITTFEMILSDCPE-LREISWRCVVIDEAHRLKNRNCKLLDSLKMLEIEHKVL 1010
Query: 314 LTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVA 373
LTGTPLQN + EL+SLLHF+ P F S EF F G +E + V
Sbjct: 1011 LTGTPLQNTVEELFSLLHFLEPAQFPSEIEFLREF---GDLKTE------------EQVQ 1055
Query: 374 KLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFS 433
KL +IL+P +LRR+K DVE+ L K+E I+ +T+ Q+ + ++ + S
Sbjct: 1056 KLQSILKPMMLRRLKEDVEKNLAPKQETIIEVELTDVQKKYYRAILERNFS------FLS 1109
Query: 434 AGRGMKGKLNNL---MVQLRKNCNHPDLL----ESAFSDSC-FYPPV------EQIVEQC 479
G + NL M++LRK CNHP L+ E S+ Y P+ + +V
Sbjct: 1110 MGATQNSNVPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSA 1169
Query: 480 GKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQI 539
GK HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I
Sbjct: 1170 GKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAI 1229
Query: 540 QDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPV 599
F+ +S +FLL TRAGGLGINLTAADTC+++DSDWNPQ DLQA RCHRIGQ+K V
Sbjct: 1230 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAV 1289
Query: 600 HVYRLATAQSVEGRILKRAFSKLKLEHVVI 629
VYRL T S E +L +A KL L+ V+
Sbjct: 1290 KVYRLITRNSYEREMLDKASLKLGLDRAVL 1319
Score = 40 (19.1 bits), Expect = 1.4e-89, Sum P(2) = 1.4e-89
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 107 CNTRKAKRAVAAMLTRSK 124
C KA R VA + R+K
Sbjct: 459 CKQEKANRIVAEAIARAK 476
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 891 (318.7 bits), Expect = 2.1e-89, Sum P(3) = 2.1e-89
Identities = 211/498 (42%), Positives = 290/498 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 856 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 915
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R I G +F ++T+
Sbjct: 916 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 974
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L +W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 975 FEMILGGCGE-LNAIDWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1033
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1034 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1078
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N
Sbjct: 1079 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGQTNVPNLVN 1134
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F D+ Y P ++ +++ GK
Sbjct: 1135 TMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPSASDFHLQAMIQSAGKLVLIDKLLPK 1192
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 1193 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1252
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E
Sbjct: 1253 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYE 1312
Query: 612 GRILKRAFSKLKLEHVVI 629
+ RA KL L+ V+
Sbjct: 1313 REMFDRASLKLGLDKAVL 1330
Score = 45 (20.9 bits), Expect = 2.1e-89, Sum P(3) = 2.1e-89
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E D+E V+ RA L+A CL +KG W+++ PT G
Sbjct: 1522 LNEHDVE-VICRA-LLAYCLIHYRGDEK----IKGFIWDLITPTEDG 1562
Score = 37 (18.1 bits), Expect = 2.1e-89, Sum P(3) = 2.1e-89
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 38 VEQENVSKNEDHLNDLQFNKLDELL 62
+EQ KN + L + Q L+ LL
Sbjct: 847 IEQSREYKNGNQLREYQLEGLNWLL 871
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 899 (321.5 bits), Expect = 3.1e-89, Sum P(2) = 3.1e-89
Identities = 212/494 (42%), Positives = 290/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 205 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 264
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 265 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 323
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 324 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 382
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 383 FSLLHFLEPGRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 427
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K K G+ L N M
Sbjct: 428 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA--FLSK--GGGQANVPNLLNTM 483
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 484 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 543
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 544 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLC 603
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 604 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 663
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 664 DKASLKLGLDKAVL 677
Score = 39 (18.8 bits), Expect = 3.1e-89, Sum P(2) = 3.1e-89
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 708 WEVVIPTATGGMLSTLN 724
W+++ PTA G + +N
Sbjct: 903 WDLITPTADGQTRALVN 919
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 902 (322.6 bits), Expect = 4.5e-89, Sum P(2) = 4.5e-89
Identities = 212/494 (42%), Positives = 291/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 966 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1025
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 1026 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQSYEMYFKDPQGRVIKGSYKFHAIITTFE 1084
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1085 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1143
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1144 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1188
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K L + G+ L N M
Sbjct: 1189 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF-TFLSK---GGGQANVPNLLNTM 1244
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 1245 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1304
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1305 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1364
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 1365 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1424
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1425 DKASLKLGLDKAVL 1438
Score = 39 (18.8 bits), Expect = 4.5e-89, Sum P(2) = 4.5e-89
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 708 WEVVIPTATGGMLSTLN 724
W+++ PTA G + +N
Sbjct: 1664 WDLITPTADGQTRALVN 1680
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 901 (322.2 bits), Expect = 5.7e-89, Sum P(2) = 5.7e-89
Identities = 212/494 (42%), Positives = 291/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 967 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1026
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 1027 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1085
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1086 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1144
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1145 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1189
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K L + G+ L N M
Sbjct: 1190 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF-TFLSK---GGGQANVPNLLNTM 1245
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 1246 MELRKCCNHPYLINGAEEKILEEFKETHNAESPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1305
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1306 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1365
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 1366 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1425
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1426 DKASLKLGLDKAVL 1439
Score = 39 (18.8 bits), Expect = 5.7e-89, Sum P(2) = 5.7e-89
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 708 WEVVIPTATGGMLSTLN 724
W+++ PTA G + +N
Sbjct: 1665 WDLITPTADGQTRALVN 1681
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 899 (321.5 bits), Expect = 6.8e-89, Sum P(2) = 6.8e-89
Identities = 212/494 (42%), Positives = 290/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 917 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 976
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 977 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1035
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1036 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1094
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1095 FSLLHFLEPTRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1139
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K K G+ L N M
Sbjct: 1140 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA--FLSK--GGGQANVPNLLNTM 1195
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 1196 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1255
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1256 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1315
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 1316 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1375
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1376 DKASLKLGLDKAVL 1389
Score = 40 (19.1 bits), Expect = 6.8e-89, Sum P(2) = 6.8e-89
Identities = 14/54 (25%), Positives = 26/54 (48%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATGGMLSTLN 724
+ E+D+E + R L+ CL+ +K W+++ PTA G + +N
Sbjct: 1584 LSEQDVETIC-RTILVY-CLNHYRGDEN----IKSFIWDLITPTADGQTRALVN 1631
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 899 (321.5 bits), Expect = 9.4e-89, Sum P(2) = 9.4e-89
Identities = 212/494 (42%), Positives = 290/494 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 968 KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1027
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 1028 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1086
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1087 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1145
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1146 FSLLHFLEPGRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1190
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K K G+ L N M
Sbjct: 1191 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFA--FLSK--GGGQANVPNLLNTM 1246
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 1247 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1306
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1307 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLC 1366
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E +
Sbjct: 1367 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 1426
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 1427 DKASLKLGLDKAVL 1440
Score = 39 (18.8 bits), Expect = 9.4e-89, Sum P(2) = 9.4e-89
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 708 WEVVIPTATGGMLSTLN 724
W+++ PTA G + +N
Sbjct: 1666 WDLITPTADGQTRALVN 1682
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 886 (316.9 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 209/494 (42%), Positives = 293/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 382 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLS 441
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP-RAI--GP-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M R P KF +V+T++E
Sbjct: 442 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFE 500
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 501 MILADCPE-LKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 559
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 560 FSLLNFLEPQQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 604
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 605 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GANQHNMPNLINTM 660
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 661 MELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 720
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 721 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 780
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 781 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 840
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 841 DKASLKLGLDKAVL 854
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 889 (318.0 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 211/498 (42%), Positives = 289/498 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 856 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEVLLTGIRGPFLIIAP 915
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R I G +F ++T+
Sbjct: 916 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 974
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 975 FEMILGGCGE-LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1033
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1034 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1078
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N
Sbjct: 1079 RRLKEDVEKRLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGQTNVPNLVN 1134
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F D+ Y P ++ +++ GK
Sbjct: 1135 TMMELRKCCNHPYLIKGAEEKIIGEFRDT--YNPSASDFHLQAMIQSAGKLVLIDKLLPK 1192
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 1193 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1252
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E
Sbjct: 1253 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYE 1312
Query: 612 GRILKRAFSKLKLEHVVI 629
+ RA KL L+ V+
Sbjct: 1313 REMFDRASLKLGLDKAVL 1330
Score = 45 (20.9 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E D+E V+ RA L+A CL +KG W+++ PT G
Sbjct: 1522 LNEHDVE-VICRA-LLAYCLVHYRGDEK----IKGFIWDLITPTEDG 1562
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 890 (318.4 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 211/498 (42%), Positives = 289/498 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 857 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 916
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R I G +F ++T+
Sbjct: 917 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 975
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 976 FEMILGGCGE-LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1034
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1035 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1079
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N
Sbjct: 1080 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGQTNVPNLVN 1135
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F D+ Y P ++ +++ GK
Sbjct: 1136 TMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPAASDFHLQAMIQSAGKLVLIDKLLPK 1193
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 1194 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1253
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E
Sbjct: 1254 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYE 1313
Query: 612 GRILKRAFSKLKLEHVVI 629
+ RA KL L+ V+
Sbjct: 1314 REMFDRASLKLGLDKAVL 1331
Score = 44 (20.5 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E D+E ++ RA L+A CL +KG W+++ PT G
Sbjct: 1523 LNEHDVE-IICRA-LLAYCLVHYRGDEK----IKGFIWDLITPTEDG 1563
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 890 (318.4 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 211/498 (42%), Positives = 289/498 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 858 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 917
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R I G +F ++T+
Sbjct: 918 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 976
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 977 FEMILGGCGE-LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1035
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1036 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1080
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N
Sbjct: 1081 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGQTNVPNLVN 1136
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F D+ Y P ++ +++ GK
Sbjct: 1137 TMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPAASDFHLQAMIQSAGKLVLIDKLLPK 1194
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 1195 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1254
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E
Sbjct: 1255 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYE 1314
Query: 612 GRILKRAFSKLKLEHVVI 629
+ RA KL L+ V+
Sbjct: 1315 REMFDRASLKLGLDKAVL 1332
Score = 44 (20.5 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E D+E ++ RA L+A CL +KG W+++ PT G
Sbjct: 1524 LNEHDVE-IICRA-LLAYCLVHYRGDEK----IKGFIWDLITPTEDG 1564
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 890 (318.4 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 211/498 (42%), Positives = 289/498 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAP
Sbjct: 859 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTGIRGPFLIIAP 918
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R I G +F ++T+
Sbjct: 919 LSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGRIIRGAYRFQAIITT 977
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 978 FEMILGGCGE-LNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1036
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F S F F G +E + V KL AIL+P +L
Sbjct: 1037 ELFSLLHFLEPLRFPSESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1081
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N
Sbjct: 1082 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLSK---GAGQTNVPNLVN 1137
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F D+ Y P ++ +++ GK
Sbjct: 1138 TMMELRKCCNHPYLIKGAEEKILGEFRDT--YNPAASDFHLQAMIQSAGKLVLIDKLLPK 1195
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 1196 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1255
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E
Sbjct: 1256 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYE 1315
Query: 612 GRILKRAFSKLKLEHVVI 629
+ RA KL L+ V+
Sbjct: 1316 REMFDRASLKLGLDKAVL 1333
Score = 44 (20.5 bits), Expect = 2.2e-88, Sum P(2) = 2.2e-88
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E D+E ++ RA L+A CL +KG W+++ PT G
Sbjct: 1525 LNEHDVE-IICRA-LLAYCLVHYRGDEK----IKGFIWDLITPTEDG 1565
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 477 (173.0 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 109/250 (43%), Positives = 146/250 (58%)
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSD-SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
KL N+M+ LRK CNHP ++E + + E++V GK HKV
Sbjct: 215 KLQNIMMLLRKCCNHPYMIEYPIDPVTQEFKIDEELVTNSGKFLILDRMLPELKKRCHKV 274
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAG 559
LVFSQ T +LDI+ Y + + + R+DGS+ ER++ I FN + +FL+STRAG
Sbjct: 275 LVFSQMTSMLDILMDYCHLRNFTFSRLDGSMSYSEREKNIYSFN-TDPEVFLFLVSTRAG 333
Query: 560 GLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAF 619
GLGINLTAADT I+YDSDWNPQ DLQA DRCHRIGQTKPV VYRL TA +++ +I++RA
Sbjct: 334 GLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAA 393
Query: 620 SKLKLEHVVIGKGQFHQERT---KSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDL 676
+K KLE ++I K F ++ +S + I +EDL
Sbjct: 394 AKRKLEKLIIHKNHFKGGQSGLSQSKNFLDAKELMELLKSRDYEREVKGSREKVISDEDL 453
Query: 677 ERVLDRADLI 686
E +LDR+DLI
Sbjct: 454 ELLLDRSDLI 463
Score = 422 (153.6 bits), Expect = 4.4e-88, Sum P(2) = 4.4e-88
Identities = 77/148 (52%), Positives = 108/148 (72%)
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
H WKYL+VDEGHR+KN KC+L++ELK NKLLLTGTPLQNNL+ELWSLL+F+LPD+
Sbjct: 1 HCYWKYLIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDV 60
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPR 397
F L+ F+SWFD++ SE ++ + ++R ++ LH IL PFLLRR+KSDV +P
Sbjct: 61 FDDLKSFESWFDITSL--SETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPP 118
Query: 398 KKEIILYATMTEHQRNFQDHLINKTLEN 425
K+E+++YA + Q F ++N+T+ N
Sbjct: 119 KREVVVYAPLCNKQEIFYTAIVNRTIAN 146
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 892 (319.1 bits), Expect = 4.7e-88, Sum P(2) = 4.7e-88
Identities = 211/498 (42%), Positives = 289/498 (58%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLST
Sbjct: 1012 LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLST 1071
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYEV 267
+ NW E + ++ ++YHGS+ R I+ M R I G KF V+T++E+
Sbjct: 1072 IPNWEREFRTWT-ELNVVVYHGSQASRKTIQAYEMYYRDTQGRIIKGAYKFHAVITTFEM 1130
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
L+D + LR+ W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL+
Sbjct: 1131 ILTDCPE-LRNVPWRCVIIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELF 1189
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLL+F+ PD F S F F G +E + V KL IL+P +LRR+
Sbjct: 1190 SLLNFLEPDRFPSESTFMQEF---GDLKTE------------EQVQKLQGILKPMMLRRL 1234
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN---- 443
K DVE+ L K+E I+ +T Q+ + ++ K L + G G G N
Sbjct: 1235 KEDVEKNLAPKEETIIEVELTNVQKKYYRAILEKNFA-FLSKSGAGGGSGGGGGSNVPNL 1293
Query: 444 -NLMVQLRKNCNHPDLLESA----FSDSCFYPPVEQ-------IVEQCGKXXXXXXXXXX 491
N M++LRK CNHP L+ A + P++Q +++ GK
Sbjct: 1294 LNTMMELRKCCNHPYLINGAEEKIMEEFRETHPLDQPEFHLQAMIQAAGKLVLIDKLLPK 1353
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +
Sbjct: 1354 LKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFV 1413
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V +YRL T S E
Sbjct: 1414 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYE 1473
Query: 612 GRILKRAFSKLKLEHVVI 629
+ +A KL L+ V+
Sbjct: 1474 REMFDKASLKLGLDKAVL 1491
Score = 40 (19.1 bits), Expect = 4.7e-88, Sum P(2) = 4.7e-88
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 665 KMIQTDIGEEDLERVLDRADLIAGCLDDEE 694
K + + ++DL + D + G +DDE+
Sbjct: 3093 KTADSSVLDDDLAGPAEEMDSMEGGMDDED 3122
Score = 39 (18.8 bits), Expect = 6.0e-88, Sum P(2) = 6.0e-88
Identities = 15/45 (33%), Positives = 22/45 (48%)
Query: 673 EEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
E D+E + RA L+A CL +KG W+++ PT G
Sbjct: 1688 ERDVETIC-RA-LLAYCLLHYRGDEN----IKGFIWDLITPTEDG 1726
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 888 (317.7 bits), Expect = 9.7e-88, Sum P(2) = 9.7e-88
Identities = 209/494 (42%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLS 519
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPR--AIG-P-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M A G P KF +V+T++E
Sbjct: 520 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ +W +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 579 MILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 638 FSLLNFLEPSQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 682
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 683 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLTK---GANQHNMPNLINTM 738
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 739 MELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 798
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 799 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 858
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 859 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 918
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 919 DKASLKLGLDKAVL 932
Score = 39 (18.8 bits), Expect = 9.7e-88, Sum P(2) = 9.7e-88
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E+D+E + RA L+ C+ K +K WE++ PT G
Sbjct: 1125 LNEKDMEMIC-RA-LLVYCV----KHYKGDEKIKSFIWELITPTKDG 1165
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 888 (317.7 bits), Expect = 9.7e-88, Sum P(2) = 9.7e-88
Identities = 209/494 (42%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLS 519
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPR--AIG-P-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M A G P KF +V+T++E
Sbjct: 520 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ +W +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 579 MILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 638 FSLLNFLEPSQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 682
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 683 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLTK---GANQHNMPNLINTM 738
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 739 MELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 798
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 799 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 858
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 859 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 918
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 919 DKASLKLGLDKAVL 932
Score = 39 (18.8 bits), Expect = 9.7e-88, Sum P(2) = 9.7e-88
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E+D+E + RA L+ C+ K +K WE++ PT G
Sbjct: 1125 LNEKDMEMIC-RA-LLVYCV----KHYKGDEKIKSFIWELITPTKDG 1165
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 888 (317.7 bits), Expect = 9.7e-88, Sum P(2) = 9.7e-88
Identities = 209/494 (42%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 460 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLS 519
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPR--AIG-P-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M A G P KF +V+T++E
Sbjct: 520 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 578
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ +W +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 579 MILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 637
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 638 FSLLNFLEPSQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 682
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 683 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLTK---GANQHNMPNLINTM 738
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 739 MELRKCCNHPYLINGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 798
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 799 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 858
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 859 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 918
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 919 DKASLKLGLDKAVL 932
Score = 39 (18.8 bits), Expect = 9.7e-88, Sum P(2) = 9.7e-88
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E+D+E + RA L+ C+ K +K WE++ PT G
Sbjct: 1125 LNEKDMEMIC-RA-LLVYCV----KHYKGDEKIKSFIWELITPTKDG 1165
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 888 (317.7 bits), Expect = 9.8e-88, Sum P(2) = 9.8e-88
Identities = 209/494 (42%), Positives = 294/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 459 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLS 518
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPR--AIG-P-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M A G P KF +V+T++E
Sbjct: 519 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFE 577
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ +W +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 578 MILADCPE-LKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 636
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 637 FSLLNFLEPSQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 681
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 682 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GANQHNMPNLINTM 737
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 738 MELRKCCNHPYLISGAEEKILEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 797
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 798 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 857
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 858 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 917
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 918 DKASLKLGLDKAVL 931
Score = 39 (18.8 bits), Expect = 9.8e-88, Sum P(2) = 9.8e-88
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 671 IGEEDLERVLDRADLIAGCLDDEEKPNAAVYPLKGPGWEVVIPTATG 717
+ E+D+E + RA L+ C+ K +K WE++ PT G
Sbjct: 1124 LNEKDMEMIC-RA-LLVYCV----KHYKGDEKIKSFIWELITPTKDG 1164
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 886 (316.9 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 209/494 (42%), Positives = 293/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 257 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLS 316
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP-RAI--GP-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M R P KF +V+T++E
Sbjct: 317 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFE 375
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 376 MILADCPE-LKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 434
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 435 FSLLNFLEPQQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 479
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 480 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GANQHNMPNLINTM 535
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 536 MELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 595
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 596 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 655
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 656 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 715
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 716 DKASLKLGLDKAVL 729
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 886 (316.9 bits), Expect = 2.3e-87, P = 2.3e-87
Identities = 209/494 (42%), Positives = 293/494 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL+ + G+HGP+L+IAPLS
Sbjct: 257 QLREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMGIHGPFLIIAPLS 316
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP-RAI--GP-----KFPIVVTSYE 266
T++NW E + ++AI+YHGS+ R I++ M R P KF +V+T++E
Sbjct: 317 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQYEMVYRDTQGNPLPGIFKFQVVITTFE 375
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + L+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN++ EL
Sbjct: 376 MILADCPE-LKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEEL 434
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLL+F+ P F S F EE + + + V KL +IL+P +LRR
Sbjct: 435 FSLLNFLEPQQFPSETAFL---------------EEFGDLKTEEQVKKLQSILKPMMLRR 479
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K + L + A + L N M
Sbjct: 480 LKDDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNF-SFLSK---GANQHNMPNLINTM 535
Query: 447 VQLRKNCNHPDLLESA----FSD--SCFYP--P---VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A D P P ++ +++ GK
Sbjct: 536 MELRKCCNHPYLINGAEEKILEDFRKTHSPEAPDFQLQAMIQAAGKLVLIDKLLPKLIAG 595
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F +S +FLL
Sbjct: 596 GHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLC 655
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TRAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ+K V VYRL T S E +
Sbjct: 656 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 715
Query: 616 KRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 716 DKASLKLGLDKAVL 729
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 888 (317.7 bits), Expect = 3.3e-87, P = 3.3e-87
Identities = 196/485 (40%), Positives = 291/485 (60%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLS 214
LK +Q++G WL W + + +LAD+MGLGKTIQ+IAFL +L + G+ GP+LV+APLS
Sbjct: 898 LKEFQVEGFLWLSYCWYHCRSSLLADEMGLGKTIQSIAFLQYLSQSVGIKGPFLVVAPLS 957
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARK 274
TL NW EI ++ + ++++GS++ R I + F +++T+YE +SD
Sbjct: 958 TLGNWHKEILKWT-KMKTLVFYGSQETRGFISKYEFKHKDTYLFEVLLTTYETIMSDHSS 1016
Query: 275 YLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFIL 334
++R W+ L++DEGHR+KN K K+L +LK I + ++LTGTPLQN++ ELW++L+F+
Sbjct: 1017 FVR-VPWRALILDEGHRIKNDKSKVLSKLKSIKTEHSIILTGTPLQNDMKELWTMLNFLD 1075
Query: 335 PDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQM 394
PD F+S +EF + S+ +KEE + V+KLH +L P+LLRRMK DVE
Sbjct: 1076 PDKFNSCQEFLDEY-------SD-LKEESQ-------VSKLHQLLSPYLLRRMKEDVELS 1120
Query: 395 LPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG---KLNNLMVQLRK 451
+P K+E ++ ++ Q+ + ++ + E S G K KL+N+M+Q+RK
Sbjct: 1121 IPIKEETVIQVELSSTQKTYYRAILERNRE------FLSRGIKQKTNLPKLSNIMIQIRK 1174
Query: 452 NCNHPDLLESAFSDSCFYPPV-------EQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQ 504
CNHP L+ A + E +V+ K H+VL+FSQ
Sbjct: 1175 VCNHPFLIPGAEESIVKQEKIAGDEELGELLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQ 1234
Query: 505 WTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGIN 564
+ L+I+E Y + Y R+DGS++ + R+ I F D ++ +FLLSTRAGG+GIN
Sbjct: 1235 MVESLNILEDYLQYREYTYERLDGSIKSEVRQASIDRFQDKGANRFVFLLSTRAGGVGIN 1294
Query: 565 LTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKL 624
LT ADT IL+DSDWNPQ DLQA RCHRIGQT V VYRL T + E + + A KL L
Sbjct: 1295 LTTADTVILFDSDWNPQSDLQAQARCHRIGQTNNVKVYRLITRNTYEEYLFECATKKLLL 1354
Query: 625 EHVVI 629
+H+V+
Sbjct: 1355 DHIVL 1359
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 883 (315.9 bits), Expect = 4.6e-87, Sum P(2) = 4.6e-87
Identities = 210/496 (42%), Positives = 290/496 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+HGP+LVIAPLS
Sbjct: 960 KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVIAPLS 1019
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM----P--RAI-GP-KFPIVVTSYE 266
T+ NW E + ++ ++YHGS+ R I+ M P R I G KF ++T++E
Sbjct: 1020 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 1078
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ L+D + LR+ W+ +V+DE HRLKN CKLL+ LK + + +K+LLTGTPLQN + EL
Sbjct: 1079 MILTDCPE-LRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEEL 1137
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+SLLHF+ P F S F F G +E + V KL AIL+P +LRR
Sbjct: 1138 FSLLHFLEPSRFPSETTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRR 1182
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ L K+E I+ +T Q+ + ++ K L + G+ L N M
Sbjct: 1183 LKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNF-TFLSK---GGGQANVPNLLNTM 1238
Query: 447 VQLRKNCNHPDLLESA-------FSDS--CFYPP--VEQIVEQCGKXXXXXXXXXXXXXX 495
++LRK CNHP L+ A F ++ P ++ +++ GK
Sbjct: 1239 MELRKCCNHPYLINGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAG 1298
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
H+VL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL
Sbjct: 1299 GHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLC 1358
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQM--DLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
TRAGGLGINLTAADTCI++DSDWNP+M QA RCHRIGQ+K V +YRL T S E
Sbjct: 1359 TRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSKSVKIYRLITRNSYERE 1418
Query: 614 ILKRAFSKLKLEHVVI 629
+ +A KL L+ V+
Sbjct: 1419 MFDKASLKLGLDKAVL 1434
Score = 39 (18.8 bits), Expect = 4.6e-87, Sum P(2) = 4.6e-87
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 708 WEVVIPTATGGMLSTLN 724
W+++ PTA G + +N
Sbjct: 1667 WDLITPTADGQTRALVN 1683
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 886 (316.9 bits), Expect = 5.0e-87, P = 5.0e-87
Identities = 209/493 (42%), Positives = 286/493 (58%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
L+ YQL+GV WL+ W N N ILAD+MGLGKTIQ+I FL + G+ GP+L+IAPLST
Sbjct: 913 LRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRTGIKGPFLIIAPLST 972
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTSYEV 267
++NW E + ++ I+YHGS R +++ M R I G +F V+T++E+
Sbjct: 973 IANWEREFRTWT-HLNVIVYHGSVVSRQMLQQYEMYCRDSQGRVIRGAYRFQAVITTFEM 1031
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
L + L +W+ +++DE HRLKN CKLL+ K + + +K+LLTGTPLQN + EL+
Sbjct: 1032 ILGGCPE-LNAIDWRCVIIDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELF 1090
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRM 387
SLLHF+ P F S F F G +E + V KL AIL+P +LRR+
Sbjct: 1091 SLLHFLEPTRFPSENTFMQEF---GDLKTE------------EQVQKLQAILKPMMLRRL 1135
Query: 388 KSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMV 447
K DVE+ L K+E I+ +T Q+ + ++ K + L + AG+ L N M+
Sbjct: 1136 KEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNF-SFLAK---GAGQANVPNLLNTMM 1191
Query: 448 QLRKNCNHPDLLESA----FSD-SCFYPP------VEQIVEQCGKXXXXXXXXXXXXXXN 496
+LRK CNHP L++ A D Y P ++ +++ GK
Sbjct: 1192 ELRKCCNHPYLIKGAEEKIMEDFKEVYSPAAVDFHLQAMIQSAGKLVLIDKLLPKMKAGG 1251
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
HKVL+FSQ + LDI+E Y ++ Y RIDG VR + R+ I F+ +S +FLL T
Sbjct: 1252 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCT 1311
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGGLGINLTAADTCI++DSDWNPQ DLQA RCHRIGQ K V VYRL T S E +
Sbjct: 1312 RAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFD 1371
Query: 617 RAFSKLKLEHVVI 629
RA KL L+ V+
Sbjct: 1372 RASLKLGLDKAVL 1384
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
Identities = 204/495 (41%), Positives = 283/495 (57%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIA 211
G KL +Q++GV WL W G+ ILAD+MGLGKTIQT+ FL L G GP+L+
Sbjct: 264 GLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISV 323
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP-RAIGPK-FPIVVTSYE--V 267
PLSTL+NW E+ + P + + Y G K R IR+ + + K T Y+ V
Sbjct: 324 PLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQTQYKFNV 383
Query: 268 ALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQN 321
L+ +L +W LVVDE HRL++ + K + L IG KLLLTGTPLQN
Sbjct: 384 MLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKLLLTGTPLQN 443
Query: 322 NLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
NL EL+ LL+F+ F+ L+ FQ+ F ++V KEE V +LH IL P
Sbjct: 444 NLEELFHLLNFLSSGKFNDLQTFQAEF-------TDVSKEE--------QVKRLHEILEP 488
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
+LRR+K+DV + +P K E I+ ++ Q+ F H++ K + L +K G G
Sbjct: 489 HMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKA-LNQK----GGGRVCS 543
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPP----VEQIVEQCGKXXXXXXXXXXXXXXNH 497
L N+M+ LRK CNHP L SA ++ P + + + GK NH
Sbjct: 544 LLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLKQLKADNH 603
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+VL+FSQ TK+L+++E++ +GY+ RIDGS++ D R++ I FND S + +FLLSTR
Sbjct: 604 RVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLSTR 663
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINL ADT I++DSDWNP D+QA R HR+GQ K V +YR T SVE RI++
Sbjct: 664 AGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQV 723
Query: 618 AFSKLKLEHVVIGKG 632
A K+ L H+V+ G
Sbjct: 724 AKHKMMLTHLVVRPG 738
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 875 (313.1 bits), Expect = 1.2e-86, P = 1.2e-86
Identities = 201/510 (39%), Positives = 297/510 (58%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLV 209
+ GG+L+ +QL G+ W+ LW G NGILAD+MGLGKT+QT+AF++ L +GP+++
Sbjct: 371 IKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHII 430
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM---PRAIGPK---FPIVVT 263
+ PLST+ W++ ++ P ++ I Y G++K RD IR PRA G K F +++T
Sbjct: 431 VVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLT 490
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
+YE L D R L W+++ VDE HRLKN + L + L + N++L+TGTPLQNN+
Sbjct: 491 TYEYILKD-RAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNI 549
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
EL +L++F++P F+ +E F+ N + EE EE + LH ++PF+
Sbjct: 550 KELAALVNFLMPGRFTIDQEID--FE-----NQD---EEQEE-----YIHDLHRRIQPFI 594
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG-RGMKGKL 442
LRR+K DVE+ LP K E IL +++ Q + +++ K N+ +AG +G L
Sbjct: 595 LRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTK---NY---SALTAGAKGGHFSL 648
Query: 443 NNLMVQLRKNCNHPDLLESA-------FSDSCFYPP--VEQIVEQCGKXXXXXXXXXXXX 493
N+M +L+K NHP L ++A F D + ++ GK
Sbjct: 649 LNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLK 708
Query: 494 XXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+VL+FSQ ++LDI+ Y + KG R+DG+V +R+ I FN +S+ +FL
Sbjct: 709 KDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFL 768
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
LSTRAGGLGINL ADT +++DSDWNPQ DLQAM R HRIGQ V VYRL + +VE
Sbjct: 769 LSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEE 828
Query: 614 ILKRAFSKLKLEHVVIGKGQFHQER-TKSN 642
+L+RA K+ LE+ +I G + TK N
Sbjct: 829 VLERARKKMILEYAIISLGVTDGNKYTKKN 858
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 879 (314.5 bits), Expect = 1.9e-86, P = 1.9e-86
Identities = 207/501 (41%), Positives = 291/501 (58%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIA 211
G KL+ YQL+G+ WL W N IL D+MGLGKT+Q+++ L L K +G+ GP+LV+A
Sbjct: 506 GNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQSVSILETLRKVHGIRGPFLVVA 565
Query: 212 PLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM---------PRAIG------P 256
PL+T+ +W E + ++A++YH S R R A G
Sbjct: 566 PLTTIPHWKREFENWT-DMNALVYHDSGAGRPICRNYEFYLKDKDGGGGGASGGASGKIT 624
Query: 257 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTG 316
KF +++T+YE+A++D R +L WKYLV+DE HRLKN CKL EL+ + LLLTG
Sbjct: 625 KFNVLITTYEMAITD-RTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTG 683
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNN ELWSLL+F+ P FS+L++F + +L+E + V L
Sbjct: 684 TPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYG------------DLKESSQ---VESLQ 728
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR 436
AIL+P+LLRRMK VE+ + K+E I+ +T Q+ + + K + LR+ G+
Sbjct: 729 AILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNF-SFLRK----GGK 783
Query: 437 GMKG-KLNNLMVQLRKNCNHPDLLESAF-SDSCFYPPVEQI----VEQCGKXXXXXXXXX 490
+G L N+M++LRK CNHP L + S++ +QI ++ GK
Sbjct: 784 SNQGPSLLNIMMELRKCCNHPYLTKGVEQSETSSIKDKDQIFQKLIQASGKLVLIDKLLP 843
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
NHKVL+FSQ +LDI++ Y +GY RIDGS++ ++R+ I F+ +S
Sbjct: 844 KLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKGNDRQAAIDRFSKPDSDRF 903
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+FLL TRAGG+GINLTAADT I++DSDWNPQ DLQA RCHRIGQ K V VYRL T +
Sbjct: 904 VFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQDKMVKVYRLVTKNTY 963
Query: 611 EGRILKRAFSKLKLEHVVIGK 631
E + +A KL L+ V+ K
Sbjct: 964 ERLMFDKASKKLGLDRAVLTK 984
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 841 (301.1 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 186/430 (43%), Positives = 270/430 (62%)
Query: 257 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTG 316
++ + VTSYE+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTG
Sbjct: 294 EWDVCVTSYEMVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTG 352
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNNL ELW+LL+F+LPD+F+S ++F SWFD C L +++ +V +LH
Sbjct: 353 TPLQNNLHELWALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLH 400
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR 436
A+L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR + K L + + + SAG+
Sbjct: 401 AVLKPFLLRRIKTDVEKSLPPKKEIKVYLGLSKMQREWW---YTKILMKDI-DVLNSAGK 456
Query: 437 GMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXN 496
K +L N+++QLRK CNHP L + A Y E IV GK
Sbjct: 457 MDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLLAKLKEQG 515
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQ--IQDFNDVNSSYRIFLL 554
+VL+FSQ T++LDI+E Y +GYE CR+DG +ER+++ I+ FN NSS IF+L
Sbjct: 516 SRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREKKEAIEAFNAPNSSKFIFML 575
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
STRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +VE RI
Sbjct: 576 STRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNTVEERI 635
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEE 674
++RA KL+L+ +VI +G+ ++ SN + ++++ +E
Sbjct: 636 VERAEIKLRLDSIVIQQGRLIDQQ--SNKLAKEEMLQMIRHGATHVFASK---ESELTDE 690
Query: 675 DLERVLDRAD 684
D+ +L+R +
Sbjct: 691 DITTLLERGE 700
Score = 641 (230.7 bits), Expect = 3.2e-63, Sum P(2) = 3.2e-63
Identities = 130/268 (48%), Positives = 189/268 (70%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 188 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 247
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 248 MVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 303
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 304 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 362
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 363 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 410
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNF 414
+K+DVE+ LP KKEI +Y +++ QR +
Sbjct: 411 IKTDVEKSLPPKKEIKVYLGLSKMQREW 438
Score = 37 (18.1 bits), Expect = 7.2e-86, Sum P(2) = 7.2e-86
Identities = 6/16 (37%), Positives = 12/16 (75%)
Query: 57 KLDELLTQTQMYAEFL 72
+ + LL QT+++A F+
Sbjct: 103 RFEFLLKQTELFAHFI 118
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 872 (312.0 bits), Expect = 1.2e-85, P = 1.2e-85
Identities = 208/499 (41%), Positives = 288/499 (57%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G +L+ YQL+G+ WL+ W N N ILAD+MGLGKTIQ+I FL + +G+ GP+L+IAP
Sbjct: 854 GNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLSGIRGPFLIIAP 913
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM------PRAI-GP-KFPIVVTS 264
LST++NW E + ++ ++YHGS R I++ M R + G +F ++T+
Sbjct: 914 LSTITNWEREFRTWT-DLNVVVYHGSMISRQMIQQYEMYFRDSQGRIVRGTYRFQAIITT 972
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ L + L W+ +++DE HRLKN CKLL+ LK + + +K+LLTGTPLQN +
Sbjct: 973 FEMILGGCPE-LNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTVE 1031
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLLHF+ P F + F F G +E + V KL AIL+P +L
Sbjct: 1032 ELFSLLHFLEPLRFPAESTFMQEF---GDLKTE------------EQVQKLQAILKPMML 1076
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ K K AG+ L N
Sbjct: 1077 RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFA--FLSK--GAGQANVPNLVN 1132
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP------VEQIVEQCGKXXXXXXXXXX 491
M++LRK CNHP L++ A F ++ Y P ++ +++ GK
Sbjct: 1133 TMMELRKCCNHPYLIKGAEEKILGEFKET--YNPTAPDFHLQAMIQSAGKLVLIDKLLPK 1190
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
HKVL+FSQ + LDI+E Y K Y RIDG VR + R+ I F+ +S +
Sbjct: 1191 MKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFV 1250
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQ-AMDRCHRIGQTKPVHVYRLATAQSV 610
FLL TRAGGLGINLTAADTCI++DSDWNPQ DLQ A RCHRIGQ K V VYRL T S
Sbjct: 1251 FLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHRIGQNKAVKVYRLITRNSY 1310
Query: 611 EGRILKRAFSKLKLEHVVI 629
E + RA KL L+ V+
Sbjct: 1311 EREMFDRASLKLGLDKAVL 1329
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 861 (308.1 bits), Expect = 3.1e-85, P = 3.1e-85
Identities = 205/504 (40%), Positives = 287/504 (56%)
Query: 139 RVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL 198
R +K ++ V + G+L+ +QL G+ W+ LW NGILAD+MGLGKT+QT+AFL+ L
Sbjct: 346 RFEKLFKQPV-FIKNGELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWL 404
Query: 199 -KGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM-PRAIGP 256
+GP+LV+ PLST+ W ++ P V+ + Y G+ + R IR + + P
Sbjct: 405 IYARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYELYNQNRKP 464
Query: 257 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTG 316
KF +++T+YE L D + L + W++L VDE HRLKN + L + LK + N+LL+TG
Sbjct: 465 KFNVLLTTYEYILKDKNE-LGAFKWQFLAVDEAHRLKNAESSLYEALKGFKVSNRLLITG 523
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNN+ EL +L +F++P F+ +E F E + E E Q + L
Sbjct: 524 TPLQNNVKELAALCNFLMPGKFTIDQEID--F--------ETIDSEQE-----QYIKDLQ 568
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG- 435
+ PF+LRR+K DVE+ LP K E IL +++ Q + ++I K N+ +AG
Sbjct: 569 KKISPFILRRLKKDVEKSLPSKSERILRVELSDIQTEYYKNIITK---NYA---ALNAGN 622
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFS---DSCFYPPVEQ----IVEQCGKXXXXXXX 488
RG + L N+M +L+K NHP L + A D P E IV GK
Sbjct: 623 RGSQISLLNIMSELKKASNHPYLFDGAEDKVLDKAGSPSRENTLKGIVMSSGKMVLLEQL 682
Query: 489 XXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSS 548
H+VL+FSQ ++LDI+ Y KGY+ R+DG+V +RK I FN S
Sbjct: 683 LSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAIDHFNAPGSK 742
Query: 549 YRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQ 608
FLLSTRAGGLGINL ADT I++DSDWNPQ DLQAM R HRIGQ V VYR +
Sbjct: 743 DFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVSVYRFVSKD 802
Query: 609 SVEGRILKRAFSKLKLEHVVIGKG 632
+VE +IL+RA K+ LE+ +I G
Sbjct: 803 TVEEQILERARKKMVLEYAIISLG 826
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 516 (186.7 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 125/328 (38%), Positives = 193/328 (58%)
Query: 143 EQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG 202
EQ +L+S +G +L YQ+ G+ WL + + +NGILAD+MGLGKTIQ IAFLA+LK NG
Sbjct: 278 EQPKLLS--SGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENG 335
Query: 203 L-HGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIV 261
L +L++ P STL NW EISR+ P + YHGS+ ER +R + F ++
Sbjct: 336 LSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMRGRFAKDGF-TGFDVL 394
Query: 262 VTSYEVALS--DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPL 319
+T+Y + S + RK R Y++ DE H LKN + L I ++LLTGTPL
Sbjct: 395 LTTYHIVGSTPEERKMFRVCKLDYVIFDEAHMLKNMTTQRYANLITINARMRILLTGTPL 454
Query: 320 QNNLAELWSLLHFILPDIFS-SLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAI 378
QNNL EL SLL F++P F+ S+E+ +S F GK + + ++E+ + + Q + + I
Sbjct: 455 QNNLLELISLLCFVMPKFFAKSIEDIKSLFAKKGKSDGD--QDEVSQFQETQ-IQRAKRI 511
Query: 379 LRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGM 438
++PF+LRR+K DV + LP+K ++ M+ Q+ + L++ N+ E S+ R
Sbjct: 512 MKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQKIYYHELVDY-YSNNKGEVCSSSERA- 569
Query: 439 KGKLNNLMVQLRKNCNHPDLLESAFSDS 466
G +M+++R+ NHP L+ F+D+
Sbjct: 570 -GIA--IMMEMRRIANHPLLMRHYFTDA 594
Score = 367 (134.2 bits), Expect = 4.0e-85, Sum P(2) = 4.0e-85
Identities = 72/144 (50%), Positives = 103/144 (71%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
H+VL+FSQ+T +LDI+E Y + + CR+DG+ ++ R+ I DFN +S + +FLLST
Sbjct: 669 HRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIF-VFLLST 727
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
+AGG+GINLTAADTC+++D D+NP D QA DRCHR+GQ +PV +YRL + ++E IL
Sbjct: 728 KAGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILM 787
Query: 617 RAFSKLKLEHVVIG--KGQFHQER 638
A KLKLE + KG+ H++R
Sbjct: 788 AAEEKLKLEKDITSNEKGEVHEQR 811
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 855 (306.0 bits), Expect = 1.2e-84, P = 1.2e-84
Identities = 194/504 (38%), Positives = 286/504 (56%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPY 207
S + GG+++ +QL G+ W+ LW NGILAD+MGLGKT+QT+ FL++L + HGP+
Sbjct: 383 SYIKGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPF 442
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP---KFPIVVTS 264
L++ PLST+ W ++ + P +++I Y G+ + R IR + KF I++T+
Sbjct: 443 LIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTT 502
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
YE L D ++ L + W+YL +DE HRLKN + L + L N+LL+TGTPLQNNL
Sbjct: 503 YEYILKDKQE-LNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLK 561
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL SL++F++P F +E FD + E++R + L L+PF+L
Sbjct: 562 ELASLVNFLMPGKFYIRDELN--FD----------QPNAEQERD---IRDLQERLQPFIL 606
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ LP K E IL +++ Q + +++ K N+ + GRG LN
Sbjct: 607 RRLKKDVEKSLPSKSERILRVELSDMQTEWYKNILTK---NYRALTGHTDGRGQLSLLN- 662
Query: 445 LMVQLRKNCNHPDLLESAFSDSCFYPPVEQ------IVEQCGKXXXXXXXXXXXXXXNHK 498
++V+L+K NHP L A + + I+ GK H+
Sbjct: 663 IVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMNSGKMVLLDKLLQRLKHDGHR 722
Query: 499 VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRA 558
VL+FSQ ++L+I+ Y + +GY R+DG++ R+ I FN +S +FLLSTRA
Sbjct: 723 VLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPDFVFLLSTRA 782
Query: 559 GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRA 618
GGLGINL ADT I++DSDWNPQ DLQAM R HRIGQ V+VYR + +VE IL+RA
Sbjct: 783 GGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDILERA 842
Query: 619 FSKLKLEHVVIGKGQFHQERTKSN 642
K+ LE+ +I G + + N
Sbjct: 843 RRKMILEYAIISLGVTEKSKNSKN 866
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 862 (308.5 bits), Expect = 1.8e-84, P = 1.8e-84
Identities = 204/501 (40%), Positives = 289/501 (57%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G L+ YQ +GV WL+ + N N ILAD+MGLGKT+QTI FL+ + G+HGP+LV+ P
Sbjct: 1194 GNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDYGIHGPFLVVVP 1253
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM---PRAIGPK--------FPIV 261
LST+ NWV E + ++AI+YHGS R+ +++ + R G K +
Sbjct: 1254 LSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDAL 1312
Query: 262 VTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKE-LKYIPIGNKLLLTGTPLQ 320
+T++E +SD ++L+ W+ V+DE HRLKN CKLL L + +++LLTGTPLQ
Sbjct: 1313 ITTFETVVSDV-EFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQ 1371
Query: 321 NNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILR 380
NN+ EL+SLL+F+ P F + F F G C ++ V KL IL+
Sbjct: 1372 NNIDELFSLLNFLHPQQFDNSATFLEQF---GSCQTD------------DQVQKLQEILK 1416
Query: 381 PFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG 440
P +LRR+K DVE+ L K+E I+ +++ Q+ F ++ + +HL K SA
Sbjct: 1417 PMMLRRLKEDVEKSLGPKEETIIEVQLSDMQKKFYRAILERNF-SHLC-KGTSAP----- 1469
Query: 441 KLNNLMVQLRKNCNHPDLL----ESAFSD-SCFYPPVEQ-------IVEQCGKXXXXXXX 488
L N+M++LRK CNHP L+ E+ +D +P ++ +++ GK
Sbjct: 1470 SLMNVMMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKL 1529
Query: 489 XXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSS 548
HKVL+FSQ K+LD++E + Y RIDG+VR D R+ I F+ NS
Sbjct: 1530 LPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSD 1589
Query: 549 YRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQ 608
+FLL TRAGGLGINLTAADT I++DSDWNPQ DLQA RCHRIGQ K V VYRL T+
Sbjct: 1590 RFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSN 1649
Query: 609 SVEGRILKRAFSKLKLEHVVI 629
+ E + +A KL L+ V+
Sbjct: 1650 TYEREMFDKASLKLGLDKAVL 1670
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 849 (303.9 bits), Expect = 5.7e-84, P = 5.7e-84
Identities = 201/547 (36%), Positives = 299/547 (54%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPY 207
S +TGG+L+ +QL GV W+ LW NGILAD+MGLGKT+QT+AFL++L + HGP+
Sbjct: 368 SYITGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPF 427
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIR--RKHMPRAIGPKFPIVVTSY 265
LV+ PLST+ W ++ + ++ I Y G+ R IR ++ KF +++T+Y
Sbjct: 428 LVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGTQKIKFNLLLTTY 487
Query: 266 EVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAE 325
E L D R L + W+Y+ +DE HRLKN + L + L N+LL+TGTPLQNN+ E
Sbjct: 488 EYVLKD-RSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRE 546
Query: 326 LWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR 385
L +L+ F++P F EE N E EE E + L L+P++LR
Sbjct: 547 LAALVDFLMPGKFEIREEI----------NLEAPDEEQEA-----YIRSLQEHLQPYILR 591
Query: 386 RMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNL 445
R+K DVE+ LP K E IL +++ Q + +++ + N+ R S G + L N+
Sbjct: 592 RLKKDVEKSLPSKSERILRVELSDLQMYWYKNILTR---NY-RVLTQSISSGSQISLLNI 647
Query: 446 MVQLRKNCNHP---DLLESAF-----SDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNH 497
+V+L+K NHP D +E ++ S ++ ++ GK H
Sbjct: 648 VVELKKASNHPYLFDGVEESWMQKINSQGRRDEVLKGLIMNSGKMVLLDKLLSRLRRDGH 707
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+VL+FSQ ++LDI+ Y + +GY R+DG+V R+ I FN NS +FLLSTR
Sbjct: 708 RVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPDFVFLLSTR 767
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINL ADT I++DSDWNPQ DLQAM R HRIGQ V VYRL + ++E +L+R
Sbjct: 768 AGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVLER 827
Query: 618 AFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDLE 677
A K+ LE+ +I G +++ N + Q + + +L+
Sbjct: 828 ARRKMILEYAIISLGVTDKQKNSKNDKFSAEELSAILKFGASNMFKAENNQKKLEDMNLD 887
Query: 678 RVLDRAD 684
+L+ A+
Sbjct: 888 EILEHAE 894
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 79 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 137
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 138 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 197
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 198 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 257
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 258 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 302
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 303 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 357
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 358 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 417
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 418 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 477
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 478 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 537
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 538 EERITQVAKRKMMLTHLVVRPG 559
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 554 (200.1 bits), Expect = 7.8e-83, Sum P(3) = 7.8e-83
Identities = 126/306 (41%), Positives = 179/306 (58%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+LK YQ G+ WL L ++GLNGILAD+MGLGKTIQ IAFLAH+ G GP+L++ P S
Sbjct: 432 ELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGDRGPHLIVVPAS 491
Query: 215 TLSNWVNEISRFVPSVSAIIYH-GSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--D 271
TL NW+ E++ + P ++ + Y+ GS+++R +R R + F ++VT+Y A+S D
Sbjct: 492 TLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRADISNRVVD--FNVIVTTYNCAISSSD 549
Query: 272 ARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLH 331
R R Y + DEGH LKN ++L I ++LLLTGTP+QNNL EL SLL+
Sbjct: 550 DRSLFRKVKLNYAIFDEGHMLKNMSSVRYQQLMRINAKHRLLLTGTPVQNNLLELMSLLN 609
Query: 332 FILPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSD 390
F++P +FSS E + F K E + EK R +A I++PF+LRR+K +
Sbjct: 610 FVMPHMFSSSTSEIRRMFSSKAKTAEE---QSTYEKER---IAHAKQIIKPFILRRVKDE 663
Query: 391 VEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLR 450
V + LP KK+ I M+E Q L+NK L+ ++ G + N M+QLR
Sbjct: 664 VLKQLPPKKDHIELCAMSEKQEQLYCDLLNK-LKKTMK------GNEKNSDMGNAMMQLR 716
Query: 451 KNCNHP 456
K NHP
Sbjct: 717 KMANHP 722
Score = 294 (108.6 bits), Expect = 7.8e-83, Sum P(3) = 7.8e-83
Identities = 65/160 (40%), Positives = 95/160 (59%)
Query: 466 SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCR 525
S F ++QI++ GK +V++FSQ+T +LDI+E + + R
Sbjct: 778 SDFKLDMDQILDS-GKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIR 836
Query: 526 IDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQ 585
+DG ++ +R I +FN + +FLLST+AGGLGINLT+A+ IL+D D NP D Q
Sbjct: 837 LDGKTQISDRIHLIDEFN-TDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQ 895
Query: 586 AMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLE 625
A DRCHR+GQT+ V V +L + ++E +LK KLKLE
Sbjct: 896 AEDRCHRVGQTREVKVIKLISKGTIEESMLKMNQQKLKLE 935
Score = 45 (20.9 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRR 368
F S E +W ++S S+ K+++++KR+
Sbjct: 235 FPSPSEVSNWTEVSANSRSD--KKKVQQKRK 263
Score = 42 (19.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSK---KERDEIRRKHMPRA 253
S +SNW E+S S + K KE++ +R+KH +A
Sbjct: 239 SEVSNWT-EVSANSRSDKKKVQQKRKFSGKEQNCLRKKHKAKA 280
Score = 37 (18.1 bits), Expect = 7.8e-83, Sum P(3) = 7.8e-83
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 105 PQCNTRKAKRAVA 117
PQC+ +K ++ +A
Sbjct: 340 PQCSEKKVQKIIA 352
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 843 (301.8 bits), Expect = 2.8e-82, Sum P(3) = 2.8e-82
Identities = 200/495 (40%), Positives = 285/495 (57%)
Query: 153 GGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAP 212
G L+ YQL+G+ WL W N N ILAD+MGLGKTIQ++ F+ + G+ GP+LVIAP
Sbjct: 2026 GNSLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYGIRGPFLVIAP 2085
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIR--RKHMPRAIG-----P-KFPIVVTS 264
LST+ NW E + ++ ++YHGS + I+ + G P KF +++T+
Sbjct: 2086 LSTIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITT 2144
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
+E+ ++D L+ +NW+ V+DE HRLKN CKLL+ L+ + + +++LL+GTPLQNN++
Sbjct: 2145 FEMIVTDYMD-LKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNIS 2203
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
EL+SLL+F+ P FSS EEF S F G +E EE V KL A+L+P +L
Sbjct: 2204 ELFSLLNFLEPSQFSSQEEFMSEF---GSLRTE------EE------VNKLQALLKPMML 2248
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
RR+K DVE+ L K+E I+ +T Q+ + ++ + + L++ SA L N
Sbjct: 2249 RRLKDDVEKSLAPKEETIIEVELTNIQKKYYRGILEQNF-SFLKKGTTSANIP---NLMN 2304
Query: 445 LMVQLRKNCNHPDLLESA-------FSDSCFYPP---VEQIVEQCGKXXXXXXXXXXXXX 494
M++LRK C HP LL A F P + ++ GK
Sbjct: 2305 TMMELRKCCIHPYLLNGAEEQIQYDFKSQHGEDPESYYKNLILSAGKMVLIDKLLPKLKA 2364
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
H+VL+FSQ + LDI+E Y + Y RIDG +R + R+ I ++ S +FLL
Sbjct: 2365 NGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAIDRYSKPGSDRFVFLL 2424
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
T+AGGLGINLTAADT I+YDSDWNPQ DLQA RCHRIGQ K V +YRL + E +
Sbjct: 2425 CTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMVKIYRLLCRNTYEREM 2484
Query: 615 LKRAFSKLKLEHVVI 629
+A KL L+ V+
Sbjct: 2485 FDKASMKLGLDKAVL 2499
Score = 37 (18.1 bits), Expect = 2.8e-82, Sum P(3) = 2.8e-82
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 702 PLKGPGWEVVIPTATGG 718
PL GPG + TGG
Sbjct: 5158 PLSGPGSLASLAGLTGG 5174
Score = 37 (18.1 bits), Expect = 2.8e-82, Sum P(3) = 2.8e-82
Identities = 6/31 (19%), Positives = 18/31 (58%)
Query: 609 SVEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
++E ++ + + KL+ +V+G +++T
Sbjct: 4307 TIEEPVIGKEKKRKKLDEIVLGLSAAKEQKT 4337
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 836 (299.3 bits), Expect = 3.0e-82, P = 3.0e-82
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 612 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 670
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 671 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 730
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 731 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 790
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 791 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 835
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 836 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 890
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 891 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 950
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 951 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1010
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1011 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1070
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1071 EERITQVAKRKMMLTHLVVRPG 1092
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 836 (299.3 bits), Expect = 3.4e-82, P = 3.4e-82
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 628 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 686
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 687 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 746
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 747 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 806
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 807 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 851
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 852 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 906
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 907 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 966
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 967 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1026
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1027 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1086
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1087 EERITQVAKRKMMLTHLVVRPG 1108
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 837 (299.7 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 694 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 752
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 753 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKE 812
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 813 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 872
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 873 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 917
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 918 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 972
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 973 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPMLPNGSYDGSSLVKSSGKLMLLQKMLK 1032
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 1033 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1092
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1093 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1152
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1153 EERITQVAKRKMMLTHLVVRPG 1174
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 836 (299.3 bits), Expect = 3.9e-82, P = 3.9e-82
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 559 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 617
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 618 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 677
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 678 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 737
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 738 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 782
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 783 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 837
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 838 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 897
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 898 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 957
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 958 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1017
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1018 EERITQVAKRKMMLTHLVVRPG 1039
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 836 (299.3 bits), Expect = 4.1e-82, P = 4.1e-82
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 642 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 700
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 701 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 760
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 761 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 820
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 821 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 865
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 866 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 920
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 921 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 980
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 981 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1040
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1041 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1100
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1101 EERITQVAKRKMMLTHLVVRPG 1122
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 836 (299.3 bits), Expect = 4.7e-82, P = 4.7e-82
Identities = 206/502 (41%), Positives = 274/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 696 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 754
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 755 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 814
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 815 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 874
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 875 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 919
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 920 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 974
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 975 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 1034
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 1035 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1094
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1095 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1154
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1155 EERITQVAKRKMMLTHLVVRPG 1176
>TAIR|locus:2062999 [details] [associations]
symbol:BRM "AT2G46020" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0010199 "organ boundary specification between
lateral organs and the meristem" evidence=IGI] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=NAS;TAS] [GO:0040029
"regulation of gene expression, epigenetic" evidence=RCA;IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00951
GO:GO:0005829 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0004386
EMBL:AC005397 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC004665
EMBL:AJ703891 IPI:IPI00529654 IPI:IPI00541940 PIR:G84897
RefSeq:NP_182126.2 RefSeq:NP_973695.1 UniGene:At.48598
ProteinModelPortal:Q6EVK6 SMR:Q6EVK6 IntAct:Q6EVK6 STRING:Q6EVK6
PaxDb:Q6EVK6 PRIDE:Q6EVK6 EnsemblPlants:AT2G46020.2 GeneID:819210
KEGG:ath:AT2G46020 TAIR:At2g46020 HOGENOM:HOG000029719
InParanoid:Q6EVK6 KO:K11647 OMA:EMNAPKE PhylomeDB:Q6EVK6
ProtClustDB:CLSN2681222 ArrayExpress:Q6EVK6 Genevestigator:Q6EVK6
GO:GO:0010199 GO:GO:0040029 Uniprot:Q6EVK6
Length = 2193
Score = 836 (299.3 bits), Expect = 6.0e-82, P = 6.0e-82
Identities = 196/504 (38%), Positives = 292/504 (57%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLHG 205
S+L G L+ YQL G++W++SL+ N LNGILAD+MGLGKT+Q +A +A+L KGN +G
Sbjct: 974 SMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGN--YG 1031
Query: 206 PYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSY 265
P+L+I P + L NW +E+ ++PSVS I Y G+K +R ++ + + KF ++VT+Y
Sbjct: 1032 PHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFSQEV---CAMKFNVLVTTY 1088
Query: 266 EVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAE 325
E + D K L +WKY+++DE R+K+ + L ++L +LLLTGTPLQN+L E
Sbjct: 1089 EFIMYDRSK-LSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLLTGTPLQNDLKE 1147
Query: 326 LWSLLHFILPDIFSSLEEFQSWF----DLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
LWSLL+ +LPD+F + + F WF G ++ + + LE +++ ++ +LH IL P
Sbjct: 1148 LWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHN-IEDDWLETEKKVIVIHRLHQILEP 1206
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHL-INKTLENHLREKVFSAGRG--M 438
F+LRR DVE LP K ++L M+ Q D + TL ++ A +
Sbjct: 1207 FMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDPDDEKLRAQKNPIY 1266
Query: 439 KGK----LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXX 494
+ K LNN ++LRK CNHP L F+D F + +V CGK
Sbjct: 1267 QAKIYRTLNNRCMELRKACNHPLLNYPYFND--FSK--DFLVRSCGKLWILDRILIKLQR 1322
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
H+VL+FS TK+LDI+E Y + RIDG+ L++R+ I DFND ++ IFLL
Sbjct: 1323 TGHRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLL 1382
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV-YRLATAQSVEGR 613
S RA G G+NL ADT ++YD D NP+ + QA+ R HRIGQT+ V V Y A + +
Sbjct: 1383 SIRAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREVKVIYMEAVVEKLSSH 1442
Query: 614 ILK---RAFSKLKLEHVVIGKGQF 634
+ R+ + LE + GK ++
Sbjct: 1443 QKEDELRSGGSVDLEDDMAGKDRY 1466
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 830 (297.2 bits), Expect = 1.6e-81, P = 1.6e-81
Identities = 206/503 (40%), Positives = 274/503 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLH--GPYL 208
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L K G H GPYL
Sbjct: 627 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEQG-HSKGPYL 685
Query: 209 VIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI-- 260
V APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 686 VSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKK 745
Query: 261 -VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLL 313
+ V L+ + L W LVVDE HRLKN + K + L I KLL
Sbjct: 746 EAQIKFHVLLTSYELITIDQAVLGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLL 805
Query: 314 LTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVA 373
LTGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ +
Sbjct: 806 LTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIK 850
Query: 374 KLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFS 433
KLH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 851 KLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK--- 906
Query: 434 AGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXX 489
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 907 -GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKML 965
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 966 KKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQ 1025
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T S
Sbjct: 1026 FCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRAS 1085
Query: 610 VEGRILKRAFSKLKLEHVVIGKG 632
VE RI + A K+ L H+V+ G
Sbjct: 1086 VEERITQVAKRKMMLTHLVVRPG 1108
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 823 (294.8 bits), Expect = 3.7e-81, Sum P(2) = 3.7e-81
Identities = 205/500 (41%), Positives = 271/500 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TG +L YQ++G+ WL W G++ ILAD+MGLGKTIQT+ FL L G GP+LV
Sbjct: 726 TGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVA 785
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI-GPKFP-IVVTSY 265
PLSTL NW E + P I Y G K R IR + AI G K + T Y
Sbjct: 786 VPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQY 845
Query: 266 E--VALSDARKY------LRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGT 317
+ V L+ L +W LVVDE HRLK+ + K + L I KLLLTGT
Sbjct: 846 KFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKFFRILNSYTIAYKLLLTGT 905
Query: 318 PLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
PLQNNL EL+ LL+F+ D F+ L+ FQ F ++V KEE V +LH
Sbjct: 906 PLQNNLEELFHLLNFLSRDKFNDLQAFQGEF-------ADVSKEE--------QVKRLHE 950
Query: 378 ILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRG 437
+L P +LRR+K+DV + +P K E I+ ++ Q+ F ++ K E L K +G G
Sbjct: 951 MLGPHMLRRLKTDVLKNMPSKSEFIVRVELSAMQKKFYKFILTKNYEA-LNSK---SGGG 1006
Query: 438 MKGKLNNLMVQLRKNCNHPDLLESAFSDSC-----FYPPVEQIVEQCGKXXXXXXXXXXX 492
L N+M+ L+K CNHP L SA ++ Y + + + GK
Sbjct: 1007 -SCSLINIMMDLKKCCNHPYLFPSAAEEATTAAGGLYE-INSLTKAAGKLVLLSKMLKQL 1064
Query: 493 XXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 552
NH+VL+FSQ TK+LDI+E + + Y+ RIDG + R+ I FN + +F
Sbjct: 1065 KAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQFVF 1124
Query: 553 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 612
LLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1125 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNSVEE 1184
Query: 613 RILKRAFSKLKLEHVVIGKG 632
R+ + A K+ L H+V+ G
Sbjct: 1185 RVTQVAKRKMMLTHLVVRPG 1204
Score = 37 (18.1 bits), Expect = 3.7e-81, Sum P(2) = 3.7e-81
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 74 EKMEDITVNGVEQESE 89
EK +DI VE+E E
Sbjct: 228 EKPDDIYEEAVEEEEE 243
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 827 (296.2 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 200/502 (39%), Positives = 275/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 706 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 764
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI-GPKFPIVV--- 262
APLST+ NW E + P + + Y G K R IR AI G K P +
Sbjct: 765 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRGGKKPSKMKKE 824
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W LVVDE HRLKN + K + L P+ +KLLL
Sbjct: 825 ASVKFHVLLTSYELITIDTAVLGSIDWACLVVDEAHRLKNNQSKFFRILNNYPLQHKLLL 884
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ FS+LE F F +++ KE+ + K
Sbjct: 885 TGTPLQNNLEELFHLLNFLTPERFSNLEGFLEEF-------ADIAKED--------QIKK 929
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + ++ + E + +
Sbjct: 930 LHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKFILTRNFE-----ALNTR 984
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VEQ--IVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L +A ++ P E + + GK
Sbjct: 985 GGGNQVSLLNVVMDLKKCCNHPYLFPAAAMEAAKMPNGMYEGGGLTKSSGKLLLLQKMLR 1044
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 1045 KLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAIDRFNAPGAPQF 1104
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+FLLSTRAGGLGINL ADT ++YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1105 VFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASV 1164
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1165 EERITQVAKKKMMLTHLVVRPG 1186
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 826 (295.8 bits), Expect = 5.4e-81, P = 5.4e-81
Identities = 199/502 (39%), Positives = 276/502 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 732 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 790
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIV--- 261
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 791 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRGGKKASKMKKE 850
Query: 262 -VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ + L +W LVVDE HRLKN + K + L P+ +KLLL
Sbjct: 851 AAVKFHVLLTSYELITIDQAILGSIDWACLVVDEAHRLKNNQSKFFRVLNNYPLQHKLLL 910
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 911 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADIAKED--------QIKK 955
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 956 LHDMLGPHMLRRLKADVFKHMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNTR 1010
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L +A +++ P + + GK
Sbjct: 1011 GGGNQVSLLNVVMDLKKCCNHPYLFPTAATEAPKMPNGMYDGSALTKASGKLMLLFKMLK 1070
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG V R+ I FN +
Sbjct: 1071 KLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAIDRFNAPGAPQF 1130
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1131 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTKASV 1190
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1191 EERITQVAKKKMMLTHLVVRPG 1212
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 492 (178.3 bits), Expect = 1.0e-80, Sum P(2) = 1.0e-80
Identities = 124/311 (39%), Positives = 171/311 (54%)
Query: 342 EEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEI 401
E+F SW D EE K R A LH L PFLLRR+K DVE+ LP K E
Sbjct: 655 EKFSSWEDF----------EEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQ 704
Query: 402 ILYATMTEHQRNFQDHLINKTLENHLREKVFSAG-RGMKGKLNNLMVQLRKNCNHPDLLE 460
IL M+ Q+ + ++ + N+ K S G +G N+M++L+K CNH L++
Sbjct: 705 ILRMEMSALQKQYYKWILTR---NY---KALSKGSKGSTSGFLNIMMELKKCCNHCYLIK 758
Query: 461 SAFSDSCFY---PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFN 517
D+ FY ++ ++ GK ++VL+FSQ ++LDI+ Y
Sbjct: 759 PP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLK 817
Query: 518 EKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSD 577
+ + R+DGS++ + RK+ + FN S FLLSTRAGGLGINL +ADT +++DSD
Sbjct: 818 YRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSD 877
Query: 578 WNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVI------GK 631
WNPQ DLQA R HRIGQ K V++YRL T SVE IL+RA K+ L+H+VI GK
Sbjct: 878 WNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGK 937
Query: 632 GQFHQERTKSN 642
H T S+
Sbjct: 938 TVLHTGSTPSS 948
Score = 366 (133.9 bits), Expect = 1.0e-80, Sum P(2) = 1.0e-80
Identities = 88/214 (41%), Positives = 127/214 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPL 213
+L+ YQL G+ WL W G + ILAD+MGLGKTIQTI+FL +L + L+GP+L++ PL
Sbjct: 477 ELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 535
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM--PRAIGPKFPIVVTSYEVALSD 271
STL++W EI + P ++A++Y G R+ IR P+ KF I++T+YE+ L D
Sbjct: 536 STLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD 595
Query: 272 ARKYLRHYNWKYLVVDEGHRLKNPKCKLLKEL-KYIPIGNKLLLTGTPLQNNLAELWSLL 330
+ +L NW ++ VDE HRLKN L K L + I + + T Q ELWSL
Sbjct: 596 -KSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVTIDSDTAPSCTIPQ----ELWSL- 649
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELE 364
HFI+P+ FSS E+F+ + + +ELE
Sbjct: 650 HFIMPEKFSSWEDFEEEHGKGREYGYASLHKELE 683
Score = 41 (19.5 bits), Expect = 8.2e-29, Sum P(2) = 8.2e-29
Identities = 13/72 (18%), Positives = 35/72 (48%)
Query: 359 MKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHL 418
+K+E EEKR + + R + K ++++ ++K T+ ++ ++
Sbjct: 1395 IKKEAEEKRETKEKENKRELKREKKEKEDKKELKEKDNKEKRENKVKESTQKEKEVKEEK 1454
Query: 419 INKTLENHLREK 430
+N+ +++ +EK
Sbjct: 1455 VNE-IKSENKEK 1465
Score = 39 (18.8 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 11/53 (20%), Positives = 24/53 (45%)
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
+++LP + A + + ++ L+NK L +++ AG + K N
Sbjct: 1278 QKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRN 1330
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 492 (178.3 bits), Expect = 1.0e-80, Sum P(2) = 1.0e-80
Identities = 124/311 (39%), Positives = 171/311 (54%)
Query: 342 EEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEI 401
E+F SW D EE K R A LH L PFLLRR+K DVE+ LP K E
Sbjct: 655 EKFSSWEDF----------EEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQ 704
Query: 402 ILYATMTEHQRNFQDHLINKTLENHLREKVFSAG-RGMKGKLNNLMVQLRKNCNHPDLLE 460
IL M+ Q+ + ++ + N+ K S G +G N+M++L+K CNH L++
Sbjct: 705 ILRMEMSALQKQYYKWILTR---NY---KALSKGSKGSTSGFLNIMMELKKCCNHCYLIK 758
Query: 461 SAFSDSCFY---PPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFN 517
D+ FY ++ ++ GK ++VL+FSQ ++LDI+ Y
Sbjct: 759 PP-DDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLK 817
Query: 518 EKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSD 577
+ + R+DGS++ + RK+ + FN S FLLSTRAGGLGINL +ADT +++DSD
Sbjct: 818 YRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSD 877
Query: 578 WNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVI------GK 631
WNPQ DLQA R HRIGQ K V++YRL T SVE IL+RA K+ L+H+VI GK
Sbjct: 878 WNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGK 937
Query: 632 GQFHQERTKSN 642
H T S+
Sbjct: 938 TVLHTGSTPSS 948
Score = 366 (133.9 bits), Expect = 1.0e-80, Sum P(2) = 1.0e-80
Identities = 88/214 (41%), Positives = 127/214 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAPL 213
+L+ YQL G+ WL W G + ILAD+MGLGKTIQTI+FL +L + L+GP+L++ PL
Sbjct: 477 ELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPL 535
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHM--PRAIGPKFPIVVTSYEVALSD 271
STL++W EI + P ++A++Y G R+ IR P+ KF I++T+YE+ L D
Sbjct: 536 STLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKD 595
Query: 272 ARKYLRHYNWKYLVVDEGHRLKNPKCKLLKEL-KYIPIGNKLLLTGTPLQNNLAELWSLL 330
+ +L NW ++ VDE HRLKN L K L + I + + T Q ELW LL
Sbjct: 596 -KSFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDLVTIDSDTAPSCTIPQ----ELW-LL 649
Query: 331 HFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELE 364
HFI+P+ FSS E+F+ + + +ELE
Sbjct: 650 HFIMPEKFSSWEDFEEEHGKGREYGYASLHKELE 683
Score = 41 (19.5 bits), Expect = 8.3e-29, Sum P(2) = 8.3e-29
Identities = 13/72 (18%), Positives = 35/72 (48%)
Query: 359 MKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHL 418
+K+E EEKR + + R + K ++++ ++K T+ ++ ++
Sbjct: 1396 IKKEAEEKRETKEKENKRELKREKKEKEDKKELKEKDNKEKRENKVKESTQKEKEVKEEK 1455
Query: 419 INKTLENHLREK 430
+N+ +++ +EK
Sbjct: 1456 VNE-IKSENKEK 1466
Score = 39 (18.8 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 11/53 (20%), Positives = 24/53 (45%)
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNN 444
+++LP + A + + ++ L+NK L +++ AG + K N
Sbjct: 1279 QKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGAGNSKRRKTRN 1331
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 822 (294.4 bits), Expect = 1.2e-80, P = 1.2e-80
Identities = 197/502 (39%), Positives = 279/502 (55%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W NG + ILAD+MGLGKT+Q++ FL L G GP+L+
Sbjct: 612 TGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIA 671
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKH---MPRAI--GPKFPIVVT-- 263
APLST+ NW E + P + Y G ++ R IR + A+ GPK + T
Sbjct: 672 APLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLE 731
Query: 264 --SYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L +W LVVDE HRLKN + K L+ I ++LLT
Sbjct: 732 NLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLT 791
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ PD F+ LE F + F SE+ KE+ + KL
Sbjct: 792 GTPLQNNLEELFHLLNFLAPDRFNQLESFTAEF-------SEISKED--------QIEKL 836
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV +P K+E+I+ ++ Q+ + +++ + + L K + G
Sbjct: 837 HNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDA-LNVK--NGG 893
Query: 436 RGMKGKLNNLMVQLRKNCNHPDL-----LESAFSDSCFYPPVEQIVEQCGKXXXXXXXXX 490
M L N++++L+K CNHP L LE+ + Y +++ GK
Sbjct: 894 TQMS--LINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEG-SALIKNAGKFVLLQKMLR 950
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ T +LDI+E + + +GY+ RIDGS+ +R+ I +N +
Sbjct: 951 KLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQF 1010
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HR+GQ V +YR T SV
Sbjct: 1011 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSV 1070
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI A K+ L H+V+ G
Sbjct: 1071 EERITSVAKKKMLLTHLVVRAG 1092
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 822 (294.4 bits), Expect = 1.2e-80, P = 1.2e-80
Identities = 197/502 (39%), Positives = 279/502 (55%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W NG + ILAD+MGLGKT+Q++ FL L G GP+L+
Sbjct: 612 TGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIA 671
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKH---MPRAI--GPKFPIVVT-- 263
APLST+ NW E + P + Y G ++ R IR + A+ GPK + T
Sbjct: 672 APLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSKIKTLE 731
Query: 264 --SYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L +W LVVDE HRLKN + K L+ I ++LLT
Sbjct: 732 NLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQYRVLLT 791
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ PD F+ LE F + F SE+ KE+ + KL
Sbjct: 792 GTPLQNNLEELFHLLNFLAPDRFNQLESFTAEF-------SEISKED--------QIEKL 836
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV +P K+E+I+ ++ Q+ + +++ + + L K + G
Sbjct: 837 HNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDA-LNVK--NGG 893
Query: 436 RGMKGKLNNLMVQLRKNCNHPDL-----LESAFSDSCFYPPVEQIVEQCGKXXXXXXXXX 490
M L N++++L+K CNHP L LE+ + Y +++ GK
Sbjct: 894 TQMS--LINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEG-SALIKNAGKFVLLQKMLR 950
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ T +LDI+E + + +GY+ RIDGS+ +R+ I +N +
Sbjct: 951 KLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQF 1010
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HR+GQ V +YR T SV
Sbjct: 1011 VFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSV 1070
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI A K+ L H+V+ G
Sbjct: 1071 EERITSVAKKKMLLTHLVVRAG 1092
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 554 (200.1 bits), Expect = 2.1e-80, Sum P(2) = 2.1e-80
Identities = 129/305 (42%), Positives = 186/305 (60%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
+LK YQL G+ WL+ L QN L+GILAD+MGLGKTIQ I+FLAHL G HGP+L+ P S
Sbjct: 428 QLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGNHGPHLITVPAS 487
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA-- 272
TL NWV E++ + PS ++Y+GS +R +R + + + + ++ I+V++Y +A+ ++
Sbjct: 488 TLDNWVRELNLWCPSFKVLVYYGSADDRKYMRYEILNQIV--EYNIIVSTYNLAIGNSSD 545
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
R +Y V DEGH LKN + L I +LLLTGTPLQNNL EL SLL+F
Sbjct: 546 RSLFCKLKLEYAVFDEGHLLKNMNSLRYRHLMAINAKYRLLLTGTPLQNNLLELMSLLNF 605
Query: 333 ILPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV 391
I+P++FSS + F + K + E + E R AKL I++PF+LRR+KS+V
Sbjct: 606 IMPNMFSSSTSQIAKMFSM--KSSEE--QSSFERDRITH--AKL--IMKPFILRRVKSEV 657
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRK 451
+ LP K+E + + M+E Q+ L++K H + G K +L N+M+QLRK
Sbjct: 658 LKQLPAKEEQVEFCAMSERQQELYSALLHKL--KH-------SSNGEKRELTNVMMQLRK 708
Query: 452 NCNHP 456
NHP
Sbjct: 709 MSNHP 713
Score = 287 (106.1 bits), Expect = 2.1e-80, Sum P(2) = 2.1e-80
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + + R+DGS + +R I FN + +FLLSTR
Sbjct: 800 RVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDRIGLIDQFNTDQDIF-VFLLSTR 858
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA RCHR+GQTK V V +L + S+E +L+
Sbjct: 859 AGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKTVKVIKLISKDSIEDTMLRI 918
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 919 GERKLKLE 926
Score = 38 (18.4 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 27/123 (21%), Positives = 48/123 (39%)
Query: 213 LSTLSNWV--NEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS 270
L +L N++ N S ++ + S +E+ R + A P ++ + S
Sbjct: 599 LMSLLNFIMPNMFSSSTSQIAKMFSMKSSEEQSSFERDRITHAKLIMKPFILRRVK---S 655
Query: 271 DARKYL--RHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWS 328
+ K L + ++ + E R + LL +LK+ G K LT +Q
Sbjct: 656 EVLKQLPAKEEQVEFCAMSE--RQQELYSALLHKLKHSSNGEKRELTNVMMQLRKMSNHP 713
Query: 329 LLH 331
LLH
Sbjct: 714 LLH 716
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 195/505 (38%), Positives = 286/505 (56%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILA-DQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPL 213
LK +Q++GV WLI + G+N +L DQMGLGKT+Q I+FL++LK GL GP+LV+ PL
Sbjct: 51 LKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLVLCPL 110
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRK---HMPRAIGPKF-P--IVVTSYEV 267
S WV+EI+RF P++ + Y G K R ++R+ H+ ++ F P +++T+Y++
Sbjct: 111 SVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHVKKSSKGHFLPFDVLLTTYDI 170
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKEL-KYIPIGNKLLLTGTPLQNNLAEL 326
AL D + +L W+Y ++DE RLKNP L L + I +LL+TGTP+QNNL EL
Sbjct: 171 ALVD-QDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLTEL 229
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+L+HF +P +F +L++F S F +G S L+ + L IL F+LRR
Sbjct: 230 WALMHFCMPLVFGTLDQFLSAFKETGDGLSG-----LDVSNDKETYKSLKFILGAFMLRR 284
Query: 387 MKSD-VEQ---MLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
KS +E +LP E+ + + Q+ ++ K L L S+G L
Sbjct: 285 TKSLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPGLLE---LSSGGSNHTSL 341
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVF 502
N+++QLRK C+HP L + + E +V+ GK H+VL+F
Sbjct: 342 QNIVIQLRKACSHPYLFPGIEPEP--FEEGEHLVQASGKLLVLDQLLKRLHDSGHRVLLF 399
Query: 503 SQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFN---------DVNSSYR-IF 552
SQ T LDI++ + + Y R+DGSVR +ER I++F+ +V+ S +F
Sbjct: 400 SQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDGSNAFVF 459
Query: 553 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 612
++STRAGG+G+NL AADT I Y+ DWNPQ+D QA+ R HRIGQ V L T SVE
Sbjct: 460 MISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVTEHSVEE 519
Query: 613 RILKRAFSKLKLEHVVIGKGQFHQE 637
IL+RA KL+L H V+G +E
Sbjct: 520 VILRRAERKLQLSHNVVGDNMEEKE 544
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 819 (293.4 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 688 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 747
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 748 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 807
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 808 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 867
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 868 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 912
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 913 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 967
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 968 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRK 1027
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1028 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1087
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1088 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1147
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1148 ERITQVAKRKMMLTHLVVRPG 1168
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 819 (293.4 bits), Expect = 3.2e-80, P = 3.2e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 732 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 791
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 792 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 851
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 852 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 911
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 956
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 957 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1011
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1012 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1071
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1192 ERITQVAKRKMMLTHLVVRPG 1212
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 819 (293.4 bits), Expect = 3.3e-80, P = 3.3e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 783 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 842
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 843 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 902
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 903 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 962
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 963 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 1007
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 1008 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1062
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1063 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRK 1122
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1123 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1182
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1183 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1242
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1243 ERITQVAKRKMMLTHLVVRPG 1263
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 819 (293.4 bits), Expect = 3.4e-80, P = 3.4e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 783 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 842
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 843 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 902
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 903 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 962
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 963 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 1007
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 1008 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1062
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1063 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLLLLQKMLRK 1122
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1123 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1182
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1183 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1242
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1243 ERITQVAKRKMMLTHLVVRPG 1263
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 819 (293.4 bits), Expect = 3.4e-80, P = 3.4e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 791 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 850
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 851 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 910
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 911 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 970
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 971 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 1015
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 1016 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1070
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1071 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRK 1130
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1131 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1190
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1191 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1250
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1251 ERITQVAKRKMMLTHLVVRPG 1271
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 818 (293.0 bits), Expect = 4.1e-80, P = 4.1e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 730 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 789
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 790 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 849
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 850 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 909
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 910 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 954
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 955 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1009
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1010 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRK 1069
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1070 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1129
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1130 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1189
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1190 ERITQVAKRKMMLTHLVVRPG 1210
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 818 (293.0 bits), Expect = 4.1e-80, P = 4.1e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 732 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 791
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 792 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 851
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 852 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 911
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 956
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 957 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1011
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1012 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRK 1071
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1072 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFC 1131
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1132 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1191
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1192 ERITQVAKRKMMLTHLVVRPG 1212
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 785 (281.4 bits), Expect = 5.2e-80, Sum P(2) = 5.2e-80
Identities = 162/363 (44%), Positives = 231/363 (63%)
Query: 280 NWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFS 339
+W +LV+DE HR+KN K L ++++ N+LL+TGTPL NNL ELWSLL+F++P IF
Sbjct: 442 DWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFD 501
Query: 340 SLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKK 399
+ EEF + F++S K + ++ +++ +LH IL+PF+LRR+K +VEQ LP K+
Sbjct: 502 NSEEFDNLFNIS--------KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKR 553
Query: 400 EIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLL 459
EI ++ M++ Q+ +++K ++ V +A G K ++ N+++QLRK CNHP L
Sbjct: 554 EIYIFVGMSKLQKKLYSDILSKNID------VLNAMTGSKNQMLNILMQLRKCCNHPYLF 607
Query: 460 ESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEK 519
+ Y ++E GK N +VL+FSQ T++LDI++ Y K
Sbjct: 608 DGIEEPP--YIEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWK 665
Query: 520 GYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWN 579
Y RIDGS DER+ +I FN+ NS Y IFLLSTRAGG+GINLT AD IL+DSD+N
Sbjct: 666 NYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYN 725
Query: 580 PQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
PQMD+QAMDR HRIGQ K V VYR T SVE +I++RA KLKL+ ++I KG+ +
Sbjct: 726 PQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSA 785
Query: 640 KSN 642
K N
Sbjct: 786 KEN 788
Score = 561 (202.5 bits), Expect = 6.9e-56, Sum P(2) = 6.9e-56
Identities = 108/272 (39%), Positives = 176/272 (64%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAP 212
G +K YQL+G+ WL L++ +NGILAD+MGLGKT+QTI+ L +L+ N + ++I P
Sbjct: 320 GTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICP 379
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
STL NW EI ++ + A Y+G+K +R E+ R + F +++T+YE+ + D
Sbjct: 380 RSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRN----LLHSDFDVLLTTYEIVIKD- 434
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
+ L +W +LV+DE HR+KN K L ++++ N+LL+TGTPL NNL ELWSLL+F
Sbjct: 435 KSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNF 494
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
++P IF + EEF + F++S K + ++ +++ +LH IL+PF+LRR+K +VE
Sbjct: 495 LMPKIFDNSEEFDNLFNIS--------KISTNDNKQSEIITQLHTILKPFMLRRLKVEVE 546
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
Q LP K+EI ++ M++ Q+ +++K ++
Sbjct: 547 QSLPPKREIYIFVGMSKLQKKLYSDILSKNID 578
Score = 57 (25.1 bits), Expect = 5.2e-80, Sum P(2) = 5.2e-80
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFL 72
N +N +E+ N LQ KL++LL QT+ Y E L
Sbjct: 235 NHNDDNNYNSEEKPNYLQ-EKLEQLLAQTKRYTEKL 269
Score = 41 (19.5 bits), Expect = 2.5e-78, Sum P(2) = 2.5e-78
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 37 NVEQENVSKNEDHLN--DLQFNKLDELLTQTQMYAEFLLEKMEDI 79
N +N + NED+ N D N D+ ++ +L EK+E +
Sbjct: 214 NHNDDNNNHNEDNNNHNDDNNNHNDDNNYNSEEKPNYLQEKLEQL 258
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 785 (281.4 bits), Expect = 5.2e-80, Sum P(2) = 5.2e-80
Identities = 162/363 (44%), Positives = 231/363 (63%)
Query: 280 NWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFS 339
+W +LV+DE HR+KN K L ++++ N+LL+TGTPL NNL ELWSLL+F++P IF
Sbjct: 442 DWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFD 501
Query: 340 SLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKK 399
+ EEF + F++S K + ++ +++ +LH IL+PF+LRR+K +VEQ LP K+
Sbjct: 502 NSEEFDNLFNIS--------KISTNDNKQSEIITQLHTILKPFMLRRLKVEVEQSLPPKR 553
Query: 400 EIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLL 459
EI ++ M++ Q+ +++K ++ V +A G K ++ N+++QLRK CNHP L
Sbjct: 554 EIYIFVGMSKLQKKLYSDILSKNID------VLNAMTGSKNQMLNILMQLRKCCNHPYLF 607
Query: 460 ESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEK 519
+ Y ++E GK N +VL+FSQ T++LDI++ Y K
Sbjct: 608 DGIEEPP--YIEGNHLIETSGKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWK 665
Query: 520 GYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWN 579
Y RIDGS DER+ +I FN+ NS Y IFLLSTRAGG+GINLT AD IL+DSD+N
Sbjct: 666 NYPYLRIDGSTPGDERQVRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYN 725
Query: 580 PQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
PQMD+QAMDR HRIGQ K V VYR T SVE +I++RA KLKL+ ++I KG+ +
Sbjct: 726 PQMDIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLIIQKGKLNLNSA 785
Query: 640 KSN 642
K N
Sbjct: 786 KEN 788
Score = 561 (202.5 bits), Expect = 6.9e-56, Sum P(2) = 6.9e-56
Identities = 108/272 (39%), Positives = 176/272 (64%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAP 212
G +K YQL+G+ WL L++ +NGILAD+MGLGKT+QTI+ L +L+ N + ++I P
Sbjct: 320 GTMKPYQLEGLNWLYQLYRFKINGILADEMGLGKTLQTISLLCYLRFNKNIKKKSIIICP 379
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
STL NW EI ++ + A Y+G+K +R E+ R + F +++T+YE+ + D
Sbjct: 380 RSTLDNWYEEIKKWCTPMKAFKYYGNKDQRKELNRN----LLHSDFDVLLTTYEIVIKD- 434
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
+ L +W +LV+DE HR+KN K L ++++ N+LL+TGTPL NNL ELWSLL+F
Sbjct: 435 KSALYDIDWFFLVIDEAHRIKNEKSVLSSSVRFLRSENRLLITGTPLHNNLKELWSLLNF 494
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
++P IF + EEF + F++S K + ++ +++ +LH IL+PF+LRR+K +VE
Sbjct: 495 LMPKIFDNSEEFDNLFNIS--------KISTNDNKQSEIITQLHTILKPFMLRRLKVEVE 546
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
Q LP K+EI ++ M++ Q+ +++K ++
Sbjct: 547 QSLPPKREIYIFVGMSKLQKKLYSDILSKNID 578
Score = 57 (25.1 bits), Expect = 5.2e-80, Sum P(2) = 5.2e-80
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFL 72
N +N +E+ N LQ KL++LL QT+ Y E L
Sbjct: 235 NHNDDNNYNSEEKPNYLQ-EKLEQLLAQTKRYTEKL 269
Score = 41 (19.5 bits), Expect = 2.5e-78, Sum P(2) = 2.5e-78
Identities = 13/45 (28%), Positives = 22/45 (48%)
Query: 37 NVEQENVSKNEDHLN--DLQFNKLDELLTQTQMYAEFLLEKMEDI 79
N +N + NED+ N D N D+ ++ +L EK+E +
Sbjct: 214 NHNDDNNNHNEDNNNHNDDNNNHNDDNNYNSEEKPNYLQEKLEQL 258
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 817 (292.7 bits), Expect = 5.2e-80, P = 5.2e-80
Identities = 202/501 (40%), Positives = 273/501 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGG L YQL+G+ WL W G + ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 728 TGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVS 787
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI---V 261
APLST+ NW E + P + Y G K R IR AI G K F +
Sbjct: 788 APLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREA 847
Query: 262 VTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
+ V L+ + L W LVVDE HRLKN + K + L I +KLLLT
Sbjct: 848 QVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLT 907
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKL 375
GTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + KL
Sbjct: 908 GTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKKL 952
Query: 376 HAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG 435
H +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + S G
Sbjct: 953 HDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFE-----ALNSRG 1007
Query: 436 RGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP--VE--QIVEQCGKXXXXXXXXXX 491
G + L N+M+ L+K CNHP L A +S P E +++ GK
Sbjct: 1008 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKASGKLMLLQKMLRK 1067
Query: 492 XXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRI 551
H+VL+FSQ TK+LD++E + + +GY+ RIDG + R+ I FN +
Sbjct: 1068 LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAHGAQQFC 1127
Query: 552 FLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVE 611
FLLSTRAGGLGINL ADT I++DSDWNP D+QA R HRIGQ V +YR T SVE
Sbjct: 1128 FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVE 1187
Query: 612 GRILKRAFSKLKLEHVVIGKG 632
RI + A K+ L H+V+ G
Sbjct: 1188 ERITQVAKRKMMLTHLVVRPG 1208
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 550 (198.7 bits), Expect = 8.0e-80, Sum P(2) = 8.0e-80
Identities = 129/316 (40%), Positives = 187/316 (59%)
Query: 145 RELVSLLTGG-KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGL 203
RE SLL LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G
Sbjct: 480 REQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN 539
Query: 204 HGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP+L++ P ST+ NW+ E++ + PS++ + Y+GS++ER +IR + + ++VT
Sbjct: 540 KGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKY--EDYNVIVT 597
Query: 264 SYEVALS--DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQN 321
+Y A+S D R R Y + DEGH LKN + L I N+LLLTGTP+QN
Sbjct: 598 TYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQN 657
Query: 322 NLAELWSLLHFILPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILR 380
NL EL SLL+F++P +FSS E + F K E + + EK R +A I++
Sbjct: 658 NLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADE---QSIYEKER---IAHAKQIIK 711
Query: 381 PFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG 440
PF+LRR+K +V ++LP KK+ I M+E Q L N+ L++ + + + +
Sbjct: 712 PFILRRVKEEVLKLLPPKKDRIELCAMSEKQEQLYSGLFNR-----LKKSINNLEKNTE- 765
Query: 441 KLNNLMVQLRKNCNHP 456
+ N+M+QLRK NHP
Sbjct: 766 -MCNVMMQLRKMANHP 780
Score = 288 (106.4 bits), Expect = 8.0e-80, Sum P(2) = 8.0e-80
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 867 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 925
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 926 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 985
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 986 NQQKLKLE 993
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 497 (180.0 bits), Expect = 8.2e-80, Sum P(2) = 8.2e-80
Identities = 115/322 (35%), Positives = 182/322 (56%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHG 205
+L L G L YQL GVKWLI ++ LN IL D+MGLGKTIQ +AFL++LK G G
Sbjct: 384 QLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTG 443
Query: 206 PYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSY 265
P+L++ P ST+ NW+ E ++ PS+ + Y+GS+ ER +R H + +++T+Y
Sbjct: 444 PHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLR--HRVKKQKDHIDVILTTY 501
Query: 266 EVALS--DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
+ S D +K+ ++++ Y++ DEGH LKN + + L + K+LLTGTPLQNNL
Sbjct: 502 NMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNL 561
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
EL SL++F+L +F+ E + K + + + + + + AIL+P++
Sbjct: 562 IELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYI 621
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN 443
LRR+K+ V LP K E I+ M + Q+ D+++ ++ E S G
Sbjct: 622 LRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSE--ESGDSYG-------- 671
Query: 444 NLMVQLRKNCNHPDLLESAFSD 465
+LM +LR+ NHP L S ++D
Sbjct: 672 SLM-RLRQAANHPLLRRSEYTD 692
Score = 342 (125.4 bits), Expect = 8.2e-80, Sum P(2) = 8.2e-80
Identities = 77/167 (46%), Positives = 104/167 (62%)
Query: 473 EQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRL 532
EQ+ + GK KVL+FSQ+T +LDI+E Y N +GY R+DG +
Sbjct: 746 EQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPV 805
Query: 533 DERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHR 592
+R+ I +FN ++ +FLLSTRAGGLGINLT+A+ I++D D+NP D QA DRCHR
Sbjct: 806 LDRQEMINEFN-LSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHR 864
Query: 593 IGQTKPVHVYRLATAQSVEGRILKRAFSKLKLE-HVVIG-KGQFHQE 637
+GQ KPVHV RL + +VE +L A KL+LE V G KGQ ++
Sbjct: 865 MGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDED 911
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 802 (287.4 bits), Expect = 9.4e-80, P = 9.4e-80
Identities = 171/389 (43%), Positives = 244/389 (62%)
Query: 241 ERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLL 300
+++E + +G F +V+ SYE+ + + + L+ NW+Y+++DE HR+KN + L
Sbjct: 279 DKEERAELIQKKLLGCDFDVVIASYEIIIRE-KSPLKKINWEYIIIDEAHRIKNEESMLS 337
Query: 301 KELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMK 360
+ L+ N+LL+TGTPLQNNL ELW+LL+F+LPDIFS ++F WF +SE +
Sbjct: 338 QVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWF------SSESTE 391
Query: 361 EELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLIN 420
E+ ++K +V +LH +L+PFLLRR+KSDVE L KKE+ LY M+ Q+ + ++
Sbjct: 392 ED-QDK----IVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILE 446
Query: 421 KTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCG 480
K L+ + + K +L N+M+QLRK CNHP L + A Y E +V
Sbjct: 447 KDLD---AVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGA-EPGPPYTTDEHLVYNAA 502
Query: 481 KXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQ 540
K +VL+FSQ +++LDI+E Y + YE CRIDGS ++R + I
Sbjct: 503 KLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAID 562
Query: 541 DFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVH 600
D+N +S +FLL+TRAGGLGINLT+AD +LYDSDWNPQ DLQAMDR HRIGQ K V
Sbjct: 563 DYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVK 622
Query: 601 VYRLATAQSVEGRILKRAFSKLKLEHVVI 629
V+RL T SVE +IL+RA KL+L+ +VI
Sbjct: 623 VFRLVTDNSVEEKILERATQKLRLDQLVI 651
Score = 632 (227.5 bits), Expect = 6.4e-61, P = 6.4e-61
Identities = 127/272 (46%), Positives = 190/272 (69%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAP 212
G+L+ YQ++GV WL+SL +N + GILAD+MGLGKT+QTI+FL +L+ + GP+LVIAP
Sbjct: 194 GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAP 253
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
STL+NW+ EI+R+ P V+A I G K+ER E+ +K + +G F +V+ SYE+ + +
Sbjct: 254 KSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKL---LGCDFDVVIASYEIIIRE- 309
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
+ L+ NW+Y+++DE HR+KN + L + L+ N+LL+TGTPLQNNL ELW+LL+F
Sbjct: 310 KSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNF 369
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+LPDIFS ++F WF +SE +E+ ++K +V +LH +L+PFLLRR+KSDVE
Sbjct: 370 LLPDIFSDAQDFDDWF------SSESTEED-QDK----IVKQLHTVLQPFLLRRIKSDVE 418
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
L KKE+ LY M+ Q+ + ++ K L+
Sbjct: 419 TSLLPKKELNLYVGMSSMQKKWYKKILEKDLD 450
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 550 (198.7 bits), Expect = 2.3e-79, Sum P(2) = 2.3e-79
Identities = 134/304 (44%), Positives = 182/304 (59%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL++YQL G+KWLI L Q+ L+GILAD+MGLGKTIQ IAFLAHL G+ GP+L+ P S
Sbjct: 447 KLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKGIKGPHLITVPSS 506
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA-- 272
TL NWV E+ + PS+ +IY+GS ++R +R+ + I F I+V++Y + + +
Sbjct: 507 TLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQDILTGLID--FNIIVSTYNLTIGNDHD 564
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
R R KY V DEGH LKN + L I ++LLLTGTPLQNNL EL SLL+F
Sbjct: 565 RSLFRKLKLKYAVFDEGHMLKNMNSLRYRHLMTINAEHRLLLTGTPLQNNLLELMSLLNF 624
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
I+P +FSS S +S K S EE E +A+ I++PF+LRR+KS+V
Sbjct: 625 IMPSMFSS-----STSQIS-KMFSTRSSEE-ESSFHKDRIAQARLIMKPFILRRVKSEVL 677
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP K E I M++ Q D L + L++ G K +L N+M+QLRK
Sbjct: 678 KELPPKMEKIEMCPMSDAQHKLYDILFKR-----LKK----TPNGDKRELCNVMMQLRKM 728
Query: 453 CNHP 456
NHP
Sbjct: 729 ANHP 732
Score = 282 (104.3 bits), Expect = 2.3e-79, Sum P(2) = 2.3e-79
Identities = 63/151 (41%), Positives = 87/151 (57%)
Query: 475 IVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDE 534
++ GK +V++FSQ+T +LDI+E ++ R+DGS + E
Sbjct: 796 LILDSGKFALLTKTLAKLKEKGDRVVLFSQFTMMLDIVEILLKHLDHQYVRLDGSTPMAE 855
Query: 535 RKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIG 594
R I +N N +FLLSTRAGG GINL +A+T IL+D D NP D QA DRCHR+G
Sbjct: 856 RIGLIDKYN-TNPEIFVFLLSTRAGGQGINLASANTVILHDIDCNPFNDKQAEDRCHRMG 914
Query: 595 QTKPVHVYRLATAQSVEGRILKRAFSKLKLE 625
QT+ V V +L + S+E +L+ KLKLE
Sbjct: 915 QTRTVQVIKLISKDSIEDCMLRVGQEKLKLE 945
Score = 47 (21.6 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 14/50 (28%), Positives = 22/50 (44%)
Query: 214 STLSNWVNEISRFVP---SVSAIIYHGSKKERDEIRRKHMPRAIGPKFPI 260
S+LS W+ S VP S+SA+ S + + R G + P+
Sbjct: 253 SSLSRWLTAASSHVPEVSSMSALKTQKSALSKSTSKNSSFKRKRGDEMPL 302
Score = 45 (20.9 bits), Expect = 4.6e-21, Sum P(3) = 4.6e-21
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 341 LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR-RMKSDVEQMLPRKK 399
L+E Q DL G+C E + +++ + + A + +I +P +L +K Q++ K
Sbjct: 401 LKERQVVLDLMGRC--EKIAQKMTKDVTQVIEAGMGSIKQPKVLNSNLKLQAYQLIGLKW 458
Query: 400 EIILY 404
I+L+
Sbjct: 459 LILLH 463
Score = 37 (18.1 bits), Expect = 3.1e-20, Sum P(3) = 3.1e-20
Identities = 12/33 (36%), Positives = 14/33 (42%)
Query: 299 LLKELKYIPIGNKLLLTGTPLQNNLAELWSLLH 331
L K LK P G+K L +Q LLH
Sbjct: 703 LFKRLKKTPNGDKRELCNVMMQLRKMANHPLLH 735
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 547 (197.6 bits), Expect = 3.7e-79, Sum P(2) = 3.7e-79
Identities = 124/304 (40%), Positives = 182/304 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G GP+L++ P ST
Sbjct: 499 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGPHLIVVPAST 558
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--DAR 273
+ NW+ E++ + P++ + Y+GS++ER +IR R ++ ++VT+Y A+S D R
Sbjct: 559 IDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSRY--EEYNVIVTTYNCAISSSDDR 616
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
R Y + DEGH LKN + L I N+LLLTGTP+QNNL EL SLL+F+
Sbjct: 617 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 676
Query: 334 LPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P +FSS E + F K E + + EK R +A I++PF+LRR+K +V
Sbjct: 677 MPHMFSSSTSEIRRMFSSKTKPADE---QSIYEKER---IAHAKQIIKPFILRRVKEEVL 730
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP KK+ I M+E Q +L N+ L++ + + + + + N+M+QLRK
Sbjct: 731 KQLPPKKDRIELCAMSEKQEQLYMNLFNR-----LKKSINNMEKNTE--MCNVMMQLRKM 783
Query: 453 CNHP 456
NHP
Sbjct: 784 ANHP 787
Score = 285 (105.4 bits), Expect = 3.7e-79, Sum P(2) = 3.7e-79
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 874 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 932
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L ++E +LK
Sbjct: 933 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKI 992
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 993 NQQKLKLE 1000
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 544 (196.6 bits), Expect = 3.8e-79, Sum P(2) = 3.8e-79
Identities = 124/304 (40%), Positives = 181/304 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G +GP+L++ P ST
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPAST 556
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--DAR 273
+ NW+ E++ + P++ + Y+GS++ER +IR R + ++VT+Y A+S D R
Sbjct: 557 IDNWLREVNLWCPTLKVLCYYGSQEERKQIRFNIHSRY--EDYNVIVTTYNCAISSSDDR 614
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
R Y + DEGH LKN + L I N+LLLTGTP+QNNL EL SLL+F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 334 LPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P +FSS E + F K E + + EK R +A I++PF+LRR+K +V
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADE---QSIYEKER---IAHAKQIIKPFILRRVKEEVL 728
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP KK+ I M+E Q L N+ L++ + + + + + N+M+QLRK
Sbjct: 729 KQLPPKKDRIELCAMSEKQEQLYLGLFNR-----LKKSINNLEKNTE--MCNVMMQLRKM 781
Query: 453 CNHP 456
NHP
Sbjct: 782 ANHP 785
Score = 288 (106.4 bits), Expect = 3.8e-79, Sum P(2) = 3.8e-79
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 872 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 931 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 990
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 991 NQQKLKLE 998
Score = 40 (19.1 bits), Expect = 1.0e-20, Sum P(2) = 1.0e-20
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 396 PRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG-KLNNLMVQLRK 451
PRK+++ + E D I KT +H E SA K +++++L+K
Sbjct: 205 PRKRKLSSSSEPYEEDEFNDDQSIKKTRLDHGEESNESAESSSNWEKQESIVLKLQK 261
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 542 (195.9 bits), Expect = 6.1e-79, Sum P(2) = 6.1e-79
Identities = 127/315 (40%), Positives = 186/315 (59%)
Query: 146 ELVSLLTGG-KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH 204
E SLL LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G
Sbjct: 484 EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK 543
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L++ P ST+ NW+ E++ + P+++ + Y+GS++ER +IR + + ++VT+
Sbjct: 544 GPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKY--EDYNVIVTT 601
Query: 265 YEVALS--DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNN 322
Y A+S D R R Y + DEGH LKN + L I N+LLLTGTP+QNN
Sbjct: 602 YNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNN 661
Query: 323 LAELWSLLHFILPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
L EL SLL+F++P +FSS E + F K E + + EK R +A I++P
Sbjct: 662 LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADE---QSIYEKER---IAHAKQIIKP 715
Query: 382 FLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
F+LRR+K +V ++LP KK+ I M+E Q L N+ L++ + + + +
Sbjct: 716 FILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNR-----LKKSINNLEKNTE-- 768
Query: 442 LNNLMVQLRKNCNHP 456
+ N+M+QLRK NHP
Sbjct: 769 MCNVMMQLRKMANHP 783
Score = 288 (106.4 bits), Expect = 6.1e-79, Sum P(2) = 6.1e-79
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 870 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 928
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 929 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 988
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 989 NQQKLKLE 996
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 542 (195.9 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 123/304 (40%), Positives = 181/304 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G GP+L++ P ST
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGPHLIVVPAST 556
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--DAR 273
+ NW+ E++ + P++ + Y+GS++ER +IR + ++ ++VT+Y A+S D R
Sbjct: 557 IDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY--EEYNVIVTTYNCAISSSDDR 614
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
R Y + DEGH LKN + L I N+LLLTGTP+QNNL EL SLL+F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 334 LPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P +FSS E + F K E + + EK R +A I++PF+LRR+K +V
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADE---QSIYEKER---IAHAKQIIKPFILRRVKEEVL 728
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP KK+ I M+E Q L N+ L++ + + + + + N+M+QLRK
Sbjct: 729 KQLPPKKDQIELCAMSEKQEQLYLGLFNR-----LKKSINNIEKSTE--MCNVMMQLRKM 781
Query: 453 CNHP 456
NHP
Sbjct: 782 ANHP 785
Score = 288 (106.4 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 872 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 931 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 990
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 991 NQQKLKLE 998
Score = 38 (18.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 28/124 (22%), Positives = 49/124 (39%)
Query: 336 DIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRG-------QMVAKLHAILRPFLLRRMK 388
D S LE+ + D+ G + +E L + R + + + + LL M
Sbjct: 140 DDISELEDLFTVDDIKGSKIRHLSREFLRRQCRTLHLKNLIESTSTMDGAIAAALL--MF 197
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG-KLNNLMV 447
D E PRK+++ + E D I K +H E SA K ++++
Sbjct: 198 GDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEESNESAESSNNWEKQESIVL 257
Query: 448 QLRK 451
+L+K
Sbjct: 258 KLQK 261
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 542 (195.9 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 123/304 (40%), Positives = 181/304 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G GP+L++ P ST
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGPHLIVVPAST 556
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--DAR 273
+ NW+ E++ + P++ + Y+GS++ER +IR + ++ ++VT+Y A+S D R
Sbjct: 557 IDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY--EEYNVIVTTYNCAISSSDDR 614
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
R Y + DEGH LKN + L I N+LLLTGTP+QNNL EL SLL+F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 334 LPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P +FSS E + F K E + + EK R +A I++PF+LRR+K +V
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADE---QSIYEKER---IAHAKQIIKPFILRRVKEEVL 728
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP KK+ I M+E Q L N+ L++ + + + + + N+M+QLRK
Sbjct: 729 KQLPPKKDQIELCAMSEKQEQLYLGLFNR-----LKKSINNIEKSTE--MCNVMMQLRKM 781
Query: 453 CNHP 456
NHP
Sbjct: 782 ANHP 785
Score = 288 (106.4 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 872 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 931 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 990
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 991 NQQKLKLE 998
Score = 38 (18.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 27/123 (21%), Positives = 48/123 (39%)
Query: 336 DIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMV------AKLHAILRPFLLRRMKS 389
D S LE+ DL + +KE ++ ++ + + + LL M
Sbjct: 142 DDISELEDLSELEDLKD-AKLQTLKELFPQRSDNDLLKLIESTSTMDGAIAAALL--MFG 198
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG-KLNNLMVQ 448
D E PRK+++ + E D I K +H E SA K +++++
Sbjct: 199 DAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEESNESAESSNNWEKQESIVLK 258
Query: 449 LRK 451
L+K
Sbjct: 259 LQK 261
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 542 (195.9 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 123/304 (40%), Positives = 181/304 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G GP+L++ P ST
Sbjct: 497 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGPHLIVVPAST 556
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--DAR 273
+ NW+ E++ + P++ + Y+GS++ER +IR + ++ ++VT+Y A+S D R
Sbjct: 557 IDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY--EEYNVIVTTYNCAISSSDDR 614
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
R Y + DEGH LKN + L I N+LLLTGTP+QNNL EL SLL+F+
Sbjct: 615 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 674
Query: 334 LPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P +FSS E + F K E + + EK R +A I++PF+LRR+K +V
Sbjct: 675 MPHMFSSSTSEIRRMFSSKTKSADE---QSIYEKER---IAHAKQIIKPFILRRVKEEVL 728
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP KK+ I M+E Q L N+ L++ + + + + + N+M+QLRK
Sbjct: 729 KQLPPKKDQIELCAMSEKQEQLYLGLFNR-----LKKSINNIEKSTE--MCNVMMQLRKM 781
Query: 453 CNHP 456
NHP
Sbjct: 782 ANHP 785
Score = 288 (106.4 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 872 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 930
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 931 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 990
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 991 NQQKLKLE 998
Score = 37 (18.1 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG-KLNNL 445
M D E PRK+++ + E D I K +H E SA K ++
Sbjct: 196 MFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEESNESAESSNNWEKQESI 255
Query: 446 MVQLRK 451
+++L+K
Sbjct: 256 VLKLQK 261
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 481 (174.4 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 114/308 (37%), Positives = 177/308 (57%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYL 208
S+ +G LKSYQ+ G+ WL +++ L+GILAD+MGLGKT Q I+FLA LK G+ +L
Sbjct: 407 SIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISFLASLKEKGIQNRHL 466
Query: 209 VIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVA 268
V+ P STL NW+ E +F PS+ Y G++ ER I +++ + F ++VT+Y++A
Sbjct: 467 VVVPSSTLGNWLREFEKFCPSLRVESYSGTQSER--INKRYY--LMDTDFDVLVTTYQLA 522
Query: 269 LS--DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
D R +LR + + DEGH LKN + K L IP +LL+TGTPLQNNL EL
Sbjct: 523 SGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLITGTPLQNNLKEL 582
Query: 327 WSLLHFILPDIF-SSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR 385
SLL F+LP +F ++++ + + + ++ + L ++R +++ I+ PF+LR
Sbjct: 583 ISLLAFMLPKVFDNNMQGLDIIYKIKTTSDGDIERAYLSQER----ISRAKTIMNPFILR 638
Query: 386 RMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLIN-KTLENHLREKVFSAGRGMKGKLNN 444
R K +V LP K + + Y M E Q + ++ K L N RE + R K L+
Sbjct: 639 RRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNANRENILMQLR--KAALHQ 696
Query: 445 LMVQLRKN 452
L+ + + N
Sbjct: 697 LLFRSQYN 704
Score = 349 (127.9 bits), Expect = 6.2e-79, Sum P(2) = 6.2e-79
Identities = 66/130 (50%), Positives = 94/130 (72%)
Query: 496 NHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
N ++L+FSQ+T++LDI+EY N E R+DGS ++ R++ I DF+ N +Y++FLLS
Sbjct: 780 NERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFH-TNENYKVFLLS 838
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
T++GG GINLT A+ IL+D +NP D+QA DR HR+GQT+PVHVYRL T ++E I
Sbjct: 839 TKSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIR 898
Query: 616 KRAFSKLKLE 625
+ A +KL LE
Sbjct: 899 RLANTKLTLE 908
Score = 244 (91.0 bits), Expect = 4.3e-49, Sum P(2) = 4.3e-49
Identities = 75/210 (35%), Positives = 109/210 (51%)
Query: 258 FPIVVTSYEVALS--DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLT 315
F ++VT+Y++A D R +LR + + DEGH LKN + K L IP +LL+T
Sbjct: 512 FDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMNIPANFRLLIT 571
Query: 316 GTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQ-MVAK 374
GTPLQNNL EL SLL F+LP +F + Q D+ K + ++E Q +++
Sbjct: 572 GTPLQNNLKELISLLAFMLPKVFDN--NMQG-LDIIYKIKT-TSDGDIERAYLSQERISR 627
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
I+ PF+LRR K +V LP K + + Y M E Q + L LE L+ V +A
Sbjct: 628 AKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLS----LYLSVLE--LKNLV-NA 680
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFS 464
R N+++QLRK H L S ++
Sbjct: 681 NR------ENILMQLRKAALHQLLFRSQYN 704
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 542 (195.9 bits), Expect = 6.4e-79, Sum P(2) = 6.4e-79
Identities = 123/304 (40%), Positives = 181/304 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL + ++GLNGILAD+MGLGKTIQ IAFLA+L G GP+L++ P ST
Sbjct: 500 LKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNKGPHLIVVPAST 559
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALS--DAR 273
+ NW+ E++ + P++ + Y+GS++ER +IR + ++ ++VT+Y A+S D R
Sbjct: 560 IDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKY--EEYNVIVTTYNCAISSSDDR 617
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
R Y + DEGH LKN + L I N+LLLTGTP+QNNL EL SLL+F+
Sbjct: 618 SLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFV 677
Query: 334 LPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P +FSS E + F K E + + EK R +A I++PF+LRR+K +V
Sbjct: 678 MPHMFSSSTSEIRRMFSSKTKSADE---QSIYEKER---IAHAKQIIKPFILRRVKEEVL 731
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ LP KK+ I M+E Q L N+ L++ + + + + + N+M+QLRK
Sbjct: 732 KQLPPKKDQIELCAMSEKQEQLYLGLFNR-----LKKSINNMEKNTE--MCNVMMQLRKM 784
Query: 453 CNHP 456
NHP
Sbjct: 785 ANHP 788
Score = 288 (106.4 bits), Expect = 6.4e-79, Sum P(2) = 6.4e-79
Identities = 61/128 (47%), Positives = 84/128 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T +LDI+E + R+DG ++ ER I +FN + +FLLST+
Sbjct: 875 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFN-TDMDIFVFLLSTK 933
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGGLGINLT+A+ IL+D D NP D QA DRCHR+GQTK V V +L + ++E +LK
Sbjct: 934 AGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKI 993
Query: 618 AFSKLKLE 625
KLKLE
Sbjct: 994 NQQKLKLE 1001
Score = 38 (18.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG-KLNNL 445
M D E PRK+++ + E D I K +H E SA K ++
Sbjct: 199 MFGDAEGGGPRKRKLSSSSEPYEEDEFNDDQSIKKKRLDHGEESNESAESSSNWEKQESI 258
Query: 446 MVQLRK 451
+++L+K
Sbjct: 259 VLKLQK 264
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 715 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 773
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 774 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 833
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 834 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 893
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 894 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 938
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 939 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 993
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 994 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1053
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1054 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1113
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1114 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1173
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1174 EERITQVAKKKMMLTHLVVRPG 1195
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 722 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 780
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 781 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 840
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 841 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 900
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 901 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 945
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 946 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 1000
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 1001 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1060
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1061 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1120
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1121 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1180
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1181 EERITQVAKKKMMLTHLVVRPG 1202
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 722 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 780
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 781 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 840
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 841 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 900
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 901 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 945
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 946 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 1000
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 1001 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1060
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1061 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1120
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1121 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1180
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1181 EERITQVAKKKMMLTHLVVRPG 1202
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 722 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 780
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 781 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 840
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 841 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 900
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 901 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 945
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 946 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 1000
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 1001 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1060
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1061 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1120
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1121 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1180
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1181 EERITQVAKKKMMLTHLVVRPG 1202
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 715 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 773
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 774 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 833
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 834 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 893
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 894 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 938
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 939 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 993
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 994 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1053
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1054 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1113
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1114 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1173
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1174 EERITQVAKKKMMLTHLVVRPG 1195
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 715 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 773
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 774 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 833
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 834 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 893
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 894 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 938
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 939 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 993
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 994 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1053
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1054 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1113
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1114 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1173
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1174 EERITQVAKKKMMLTHLVVRPG 1195
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 742 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 800
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 801 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 860
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 861 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 920
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 921 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 965
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 966 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 1020
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 1021 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1080
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1081 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1140
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1141 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1200
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1201 EERITQVAKKKMMLTHLVVRPG 1222
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 744 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 802
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 803 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 862
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 863 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 922
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 923 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 967
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 968 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 1022
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 1023 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1082
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1083 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1142
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1143 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1202
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1203 EERITQVAKKKMMLTHLVVRPG 1224
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 803 (287.7 bits), Expect = 1.5e-78, P = 1.5e-78
Identities = 195/502 (38%), Positives = 271/502 (53%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQ++G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+LV
Sbjct: 743 TGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFLV 801
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIVV-- 262
APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 802 SAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKE 861
Query: 263 --TSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ L +W L+VDE HRLKN + K + L + +KLLL
Sbjct: 862 ASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLL 921
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ + K
Sbjct: 922 TGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIKK 966
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 967 LHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNAR 1021
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 1022 GGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLK 1081
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1082 NLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQF 1141
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K V +YR T SV
Sbjct: 1142 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASV 1201
Query: 611 EGRILKRAFSKLKLEHVVIGKG 632
E RI + A K+ L H+V+ G
Sbjct: 1202 EERITQVAKKKMMLTHLVVRPG 1223
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 744 (267.0 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 148/318 (46%), Positives = 216/318 (67%)
Query: 150 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLV 209
+ TGG ++ YQ++G++WL LW+NG+NGILAD+MGLGKTIQ IA +A + G+ GP+LV
Sbjct: 216 IFTGGVMRWYQVEGMEWLRMLWENGINGILADEMGLGKTIQCIATIALMVERGVPGPFLV 275
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKF-PIVVTSYEVA 268
PLSTL NW++E RF P + ++YHG+++ER ++ RK R K P+V+TS+E+A
Sbjct: 276 CGPLSTLPNWMSEFKRFTPEIPLMLYHGAQQERRKLVRKIHGRQGSLKIHPVVITSFEIA 335
Query: 269 LSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWS 328
+ D R L+ WKYL+VDEGHR+KN C+L++ELK NKLLLTGTPLQNNLAELWS
Sbjct: 336 MRD-RNALQSCFWKYLIVDEGHRIKNMNCRLIRELKRFNADNKLLLTGTPLQNNLAELWS 394
Query: 329 LLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
LL+F+LPD+F L+ F+SWFD++ +E ++ + +++ ++ LH IL PFLLRR+K
Sbjct: 395 LLNFLLPDVFDDLKSFESWFDITSI--TETAEDIIAKEKEQNILHMLHQILTPFLLRRLK 452
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHL---REKVFS---AGRGMKGKL 442
SDV +P K+E+++YA + + Q F ++N+T+ N L E+V GR K +
Sbjct: 453 SDVALEVPPKREVVVYAPLAKKQETFYTAIVNRTIRNLLGNNEEEVVELSPTGRP-KRRS 511
Query: 443 NNLMVQLRKNCNHPDLLE 460
L+ ++ PD LE
Sbjct: 512 RKLVDYCEEHNGSPDDLE 529
Score = 503 (182.1 bits), Expect = 1.5e-51, Sum P(2) = 1.5e-51
Identities = 131/347 (37%), Positives = 190/347 (54%)
Query: 358 VMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLP------RKKEIILYATMTEHQ 411
V+ L +K+ A ++ +R LL + +V ++ P R ++++ Y EH
Sbjct: 466 VVYAPLAKKQETFYTAIVNRTIRN-LLGNNEEEVVELSPTGRPKRRSRKLVDYCE--EHN 522
Query: 412 RNFQD--HLINKTLENHLREK-VFSAGRGMKG----KLNNLMVQLRKNCNHPDLLESAFS 464
+ D LIN+T E ++E+ V M KL N+M+ LRK CNHP L+E
Sbjct: 523 GSPDDLEKLINRTQEEVVKERPVVEVSMPMDSEVNLKLQNIMMLLRKCCNHPYLIEYPLD 582
Query: 465 DSCFYPPV-EQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEV 523
+ V E +V+ GK HKVL+FSQ T +LDI+ Y +G++
Sbjct: 583 PATQQFKVDEDLVKNSGKFLLLDRMLPELKKRGHKVLMFSQMTMMLDILMDYCYLRGFKF 642
Query: 524 CRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMD 583
R+DGS+ +R+ + FN+ + +FL+STRAGGLGINLTAADT I+YDSDWNPQ D
Sbjct: 643 SRLDGSMSYSDREENMHQFNNDPEVF-LFLVSTRAGGLGINLTAADTVIIYDSDWNPQSD 701
Query: 584 LQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERT---- 639
LQA DRCHRIGQTKPV VYRL TA +++ +I++RA +K KLE ++I K QF ++
Sbjct: 702 LQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVERAAAKRKLEKLIIHKNQFKGGKSGLAQ 761
Query: 640 KSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDLERVLDRADLI 686
+C+ + I ++DLE +LDR+DLI
Sbjct: 762 SKSCLDPQELIELLKSRDYEREVKGSKEKV-ISDKDLELLLDRSDLI 807
Score = 62 (26.9 bits), Expect = 2.8e-78, Sum P(2) = 2.8e-78
Identities = 10/27 (37%), Positives = 21/27 (77%)
Query: 51 NDLQFNKLDELLTQTQMYAEFLLEKME 77
+++++ +L LL ++ +Y++FLL KME
Sbjct: 60 SEMRYKRLQHLLEKSNIYSKFLLTKME 86
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 797 (285.6 bits), Expect = 5.8e-78, P = 5.8e-78
Identities = 196/503 (38%), Positives = 277/503 (55%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGGKL YQL+G+ WL W NG + ILAD+MGLGKT+Q++ FL L G GP+L+
Sbjct: 598 TGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIA 657
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKH----MPRAI--GPKFPIVVTS 264
APLST+ NW E ++ P + Y G + R + R+H + A+ GPK + T+
Sbjct: 658 APLSTIINWEREAEQWCPDFYVVTYVGLRDAR-VVLREHEFSFVEGAVRSGPKASKMKTT 716
Query: 265 ----YEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ + L W LVVDE HRLKN + K L I ++LL
Sbjct: 717 ENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLL 776
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ + F+ LE F + F+ E+ KE+ + K
Sbjct: 777 TGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN-------EISKED--------QIEK 821
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV +P K E+I+ ++ Q+ + +++ + + L K +
Sbjct: 822 LHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDA-LNVK--NG 878
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL-----LESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
G M L N++++L+K CNHP L LE+ + Y +++ GK
Sbjct: 879 GTQMS--LMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTA-LIKNSGKFVLLQKML 935
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
H+VL+FSQ T++LDIME +GY RIDGS+ R+ I +N +
Sbjct: 936 RKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQ 995
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IFLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HR+GQ V +YR T +S
Sbjct: 996 FIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKS 1055
Query: 610 VEGRILKRAFSKLKLEHVVIGKG 632
VE +I A K+ L H+V+ G
Sbjct: 1056 VEEKITSVAKKKMLLNHLVVRAG 1078
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 797 (285.6 bits), Expect = 5.8e-78, P = 5.8e-78
Identities = 196/503 (38%), Positives = 277/503 (55%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVI 210
TGGKL YQL+G+ WL W NG + ILAD+MGLGKT+Q++ FL L G GP+L+
Sbjct: 598 TGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIA 657
Query: 211 APLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKH----MPRAI--GPKFPIVVTS 264
APLST+ NW E ++ P + Y G + R + R+H + A+ GPK + T+
Sbjct: 658 APLSTIINWEREAEQWCPDFYVVTYVGLRDAR-VVLREHEFSFVEGAVRSGPKASKMKTT 716
Query: 265 ----YEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
+ V L+ + L W LVVDE HRLKN + K L I ++LL
Sbjct: 717 ENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLL 776
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ + F+ LE F + F+ E+ KE+ + K
Sbjct: 777 TGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN-------EISKED--------QIEK 821
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV +P K E+I+ ++ Q+ + +++ + + L K +
Sbjct: 822 LHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDA-LNVK--NG 878
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDL-----LESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
G M L N++++L+K CNHP L LE+ + Y +++ GK
Sbjct: 879 GTQMS--LMNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTA-LIKNSGKFVLLQKML 935
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
H+VL+FSQ T++LDIME +GY RIDGS+ R+ I +N +
Sbjct: 936 RKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQ 995
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IFLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HR+GQ V +YR T +S
Sbjct: 996 FIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKS 1055
Query: 610 VEGRILKRAFSKLKLEHVVIGKG 632
VE +I A K+ L H+V+ G
Sbjct: 1056 VEEKITSVAKKKMLLNHLVVRAG 1078
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 543 (196.2 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 130/341 (38%), Positives = 197/341 (57%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYL 208
+L + +LKSYQL GV WL L+Q L+GILAD+MGLGKT Q +AF A L G HGP+L
Sbjct: 543 TLASDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKTCQVVAFFALLLEQGHHGPHL 602
Query: 209 VIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVA 268
V+ P STL NW+ E++RF PS+ Y+GS++ER IR I K+ I+VT+Y++A
Sbjct: 603 VVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIREAIEENEI--KYDILVTTYQLA 660
Query: 269 LSDA--RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
++ R +L+H N+ V DEGH LKN + K L + +LLLTGTPLQNNL EL
Sbjct: 661 TNNKEDRSFLKHQNFDVCVYDEGHYLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKEL 720
Query: 327 WSLLHFILPDIFSS-LEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLR 385
SLL FILP++F S +++ F ++++ ++ L K+R +++ ++ PF+LR
Sbjct: 721 VSLLAFILPNMFDSDMDDLDVIFKAKPTADADI-EQALLSKQR---ISRAKTMMTPFVLR 776
Query: 386 RMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLI----NKTL----ENHLREKVFSAGRG 437
R K+ V LP+K +II + ++E+Q + N+ L + + R K G
Sbjct: 777 RRKNQVLNDLPKKTQIIEHCKLSENQLEIYNRYAALQKNQQLRRDDKRNKRSKNDEESDG 836
Query: 438 MKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQ 478
++++QLRK NH L + D + I+++
Sbjct: 837 KSLSAGHVLMQLRKAANHALLFRKFYDDEKLKQMAKDIMQE 877
Score = 270 (100.1 bits), Expect = 1.4e-76, Sum P(2) = 1.4e-76
Identities = 59/140 (42%), Positives = 86/140 (61%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
++L+FSQ+T++LDI+E + R+DGS +++ R+ I F+ +FLLST+
Sbjct: 942 RILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHK-EEDVTVFLLSTK 1000
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGG GINL A+ ILYD +NP DLQA DR HR+GQ + V V RL T ++E I K
Sbjct: 1001 AGGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKL 1060
Query: 618 AFSKLKLEHVVIGKGQFHQE 637
A +KL L+ + G+ +E
Sbjct: 1061 ANTKLALDMSLSSDGKDREE 1080
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 777 (278.6 bits), Expect = 1.7e-76, P = 1.7e-76
Identities = 192/467 (41%), Positives = 255/467 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 696 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 754
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 755 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 814
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 815 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 874
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 875 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 919
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 920 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 974
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 975 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 1034
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 1035 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1094
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTK 597
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQTK
Sbjct: 1095 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQTK 1141
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 447 (162.4 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 116/335 (34%), Positives = 179/335 (53%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPY 207
SLL G L+ YQ +G+ WL SL+ N NGILAD+MGLGKTIQTI+ LA+L + GP+
Sbjct: 817 SLLRG-TLRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPH 875
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRK-HMPRAIGPKFPIVVTSYE 266
L+I P S + NW E +F P + Y+GS ++R + R+ + P A F + +TSY+
Sbjct: 876 LIIVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQRAQKRKGWNKPDA----FHVCITSYQ 931
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + D + + R W Y+++DE H +KN + + L N+LLLTGTPLQNNL EL
Sbjct: 932 LVVQDQQSFKRR-RWTYMILDEAHNIKNFRSTRWRALLNFNTENRLLLTGTPLQNNLMEL 990
Query: 327 WSLLHFILPDI---------FSSLEEFQSWFDLSGKCNSEVMKEE-------LEEKRRGQ 370
WSLL+F++P F++L++FQ WF GK + ++++ ++E R
Sbjct: 991 WSLLYFLMPSSKVNQAMPEGFANLDDFQQWF---GKPVNRILEQTSAGNSDLIDENER-- 1045
Query: 371 MVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKT--LENHLR 428
K+ R + R + +L R K+ + +++ L + L +
Sbjct: 1046 TTQKMDEETRNTVARLHQVLRPYLLRRLKKDVEKQMPGKYEHIVYCRLSKRQRFLYDDFM 1105
Query: 429 EKVFSAGRGMKGK---LNNLMVQLRKNCNHPDLLE 460
+ + G + N ++QLRK CNHPDL E
Sbjct: 1106 SRAKTKETLASGNFLSIINCLMQLRKVCNHPDLFE 1140
Score = 401 (146.2 bits), Expect = 1.9e-76, Sum P(2) = 1.9e-76
Identities = 74/169 (43%), Positives = 106/169 (62%)
Query: 466 SCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCR 525
S +P + CGK H+ L+F+Q TK+LDI+E + N GY R
Sbjct: 1352 SIAFPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNIHGYRYMR 1411
Query: 526 IDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQ 585
+DG+ ++++R+ + FN + +F+LSTR+GGLGINLT ADT I YDSDWNP MD Q
Sbjct: 1412 LDGATKIEDRQLLTEKFNR-DPKIPVFILSTRSGGLGINLTGADTVIFYDSDWNPAMDKQ 1470
Query: 586 AMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQF 634
DRCHRIGQ + VH+YR + ++E I+K+A K +L++VVI +G+F
Sbjct: 1471 CQDRCHRIGQVRDVHIYRFVSEYTIESNIIKKANQKRQLDNVVIQEGEF 1519
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 772 (276.8 bits), Expect = 2.5e-76, P = 2.5e-76
Identities = 165/376 (43%), Positives = 236/376 (62%)
Query: 257 KFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTG 316
+F +++TSYE+ + + + L+ W+Y+V+DE HR+KN + L + ++ N+LL+TG
Sbjct: 283 RFDVLITSYEMVIRE-KNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITG 341
Query: 317 TPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLH 376
TPLQNNL ELW+LL+F+LPDIF E F WF+ + NSE +E+ ++ +LH
Sbjct: 342 TPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQN---NSE-QDQEI-------VIQQLH 390
Query: 377 AILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGR 436
++L PFLLRR+K+DVE+ L K E +Y MT+ Q + L+ K ++ + V R
Sbjct: 391 SVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDA-VNGAV--GKR 447
Query: 437 GMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXN 496
K +L N+++QLRK CNHP L E A Y E ++ GK
Sbjct: 448 EGKTRLLNIVMQLRKCCNHPYLFEGA-EPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKG 506
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
+VL+FSQ +++LDI+E Y + +E CRIDGS +ER I ++N NS +FLL+T
Sbjct: 507 SRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTT 566
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGGLGINL ADT IL+DSDWNPQ DLQAMDR HRIGQ K VHVYR T ++E ++++
Sbjct: 567 RAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIE 626
Query: 617 RAFSKLKLEHVVIGKG 632
RA KL+L+ +VI +G
Sbjct: 627 RAAQKLRLDQLVIQQG 642
Score = 589 (212.4 bits), Expect = 2.7e-56, P = 2.7e-56
Identities = 121/280 (43%), Positives = 184/280 (65%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + GKL+ YQ++G+ WLISL +N L+GILAD+MGLGKT+QTI+FL +L+ +
Sbjct: 174 ESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P STL NW E ++ P+V+ ++ HG K R +I R + A +F +++TS
Sbjct: 234 GPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEA---RFDVLITS 290
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
YE+ + + + L+ W+Y+V+DE HR+KN + L + ++ N+LL+TGTPLQNNL
Sbjct: 291 YEMVIRE-KNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLH 349
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
ELW+LL+F+LPDIF E F WF+ + NSE +E+ ++ +LH++L PFLL
Sbjct: 350 ELWALLNFLLPDIFGDSELFDEWFEQN---NSE-QDQEI-------VIQQLHSVLNPFLL 398
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
RR+K+DVE+ L K E +Y MT+ Q + L+ K ++
Sbjct: 399 RRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDID 438
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 761 (272.9 bits), Expect = 4.9e-76, Sum P(2) = 4.9e-76
Identities = 158/357 (44%), Positives = 229/357 (64%)
Query: 277 RHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPD 336
+ ++W+Y+++DE HR+KN L K ++ +LL+TGTPLQNNL ELWSLL+F+LPD
Sbjct: 394 KKFSWRYIIIDEAHRIKNENSVLSKGVRMFNSQFRLLITGTPLQNNLHELWSLLNFLLPD 453
Query: 337 IFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLP 396
+FSS ++F WFDL+ N+E +E ++ KLH +LRPFLLRR+K++VE+ LP
Sbjct: 454 VFSSSDDFDKWFDLAN--NTENQQEVID---------KLHKVLRPFLLRRIKTEVEKSLP 502
Query: 397 RKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHP 456
KKEI L+ ++ Q+ + L++K L+ + V + G + +L N+ +QLRK CNHP
Sbjct: 503 PKKEIKLFVGLSTMQKEWYKRLLSKDLDAVV---VGAKGNTGRVRLLNICMQLRKACNHP 559
Query: 457 DLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYF 516
L + A + Y E +++ GK +VL+FSQ +++LDI+E Y
Sbjct: 560 YLFDGAEEEP--YTTGEHLIDNSGKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYM 617
Query: 517 NEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDS 576
+GY+ RIDGS R+ I+++N S FLL+TRAGGLGI L AD IL+DS
Sbjct: 618 LYRGYKYARIDGSTESIVRENSIENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDS 677
Query: 577 DWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGKGQ 633
DWNPQMDLQA DR HRIGQTKPV VYR T S+E +++++A KL+L+ +VI +G+
Sbjct: 678 DWNPQMDLQAQDRAHRIGQTKPVTVYRFVTENSMEEKMVEKAEMKLQLDALVIQQGR 734
Score = 646 (232.5 bits), Expect = 2.5e-65, Sum P(3) = 2.5e-65
Identities = 123/275 (44%), Positives = 190/275 (69%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLV 209
+ G ++ YQ+ G+ WLI L++ G+NGILAD+MGLGKT+QTI+ L +L G+ GP+L+
Sbjct: 271 IKSGTMRDYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEYKGIRGPHLI 330
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 269
IAP STLS W E +R+ P + + +HGSK+ER++I++ + I KF + +T+YEVA+
Sbjct: 331 IAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEEREDIKKNQL---IFKKFDVCITTYEVAI 387
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
+ + + ++W+Y+++DE HR+KN L K ++ +LL+TGTPLQNNL ELWSL
Sbjct: 388 REKSTF-KKFSWRYIIIDEAHRIKNENSVLSKGVRMFNSQFRLLITGTPLQNNLHELWSL 446
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
L+F+LPD+FSS ++F WFDL+ N+E +E ++ KLH +LRPFLLRR+K+
Sbjct: 447 LNFLLPDVFSSSDDFDKWFDLAN--NTENQQEVID---------KLHKVLRPFLLRRIKT 495
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+VE+ LP KKEI L+ ++ Q+ + L++K L+
Sbjct: 496 EVEKSLPPKKEIKLFVGLSTMQKEWYKRLLSKDLD 530
Score = 40 (19.1 bits), Expect = 2.5e-65, Sum P(3) = 2.5e-65
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 575 DSDWNPQMDLQAMDRCHRIG 594
+ ++N + D+ + CHR+G
Sbjct: 1032 NKNYNDEEDIFLVCMCHRLG 1051
Score = 38 (18.4 bits), Expect = 4.9e-76, Sum P(2) = 4.9e-76
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 38 VEQENVSKNEDHLND 52
+E+E V NE++ ND
Sbjct: 75 MEEEEVDDNEENGND 89
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 772 (276.8 bits), Expect = 5.1e-76, P = 5.1e-76
Identities = 191/467 (40%), Positives = 254/467 (54%)
Query: 152 TGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYLV 209
TGG L YQL+G+ WL W G + ILAD+MGLGKT+QTI FL L G H GPYLV
Sbjct: 670 TGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEG-HSKGPYLV 728
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPK-FPI--- 260
APLST+ NW E + P + Y G K+ R IR AI G K F +
Sbjct: 729 SAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKE 788
Query: 261 VVTSYEVALSDA------RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
V + V L+ + L W LVVDE HRLKN + K + L I KLLL
Sbjct: 789 VQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLL 848
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
TGTPLQNNL EL+ LL+F+ P+ F++LE F F +++ KE+ + K
Sbjct: 849 TGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF-------ADISKED--------QIKK 893
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
LH +L P +LRR+K+DV + +P K E+I+ +++ Q+ + ++ + E L K
Sbjct: 894 LHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEA-LNSK---- 948
Query: 435 GRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXXX 490
G G + L N+M+ L+K CNHP L A ++ P +V+ GK
Sbjct: 949 GGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLK 1008
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ TK+LD++E + +GY+ RIDG + R+ I FN +
Sbjct: 1009 KLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQF 1068
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTK 597
FLLSTRAGGLGINL ADT I+YDSDWNP D+QA R HRIGQ K
Sbjct: 1069 CFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK 1115
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 519 (187.8 bits), Expect = 7.4e-75, Sum P(2) = 7.4e-75
Identities = 125/335 (37%), Positives = 182/335 (54%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL+ YQ+ G+ WL L++ L GILAD+MGLGKT QTIAF + L ++GP+LVIAP S
Sbjct: 386 KLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDKNINGPHLVIAPAS 445
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA-- 272
T+ NW+ E ++F P + +Y+GS+ ER+EIR + + +++T+Y +A +
Sbjct: 446 TMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNK--DSYNVMLTTYRLAATSKAD 503
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
R +LR+ + V DEGH LKN + + L IP ++LLTGTPLQNNL EL SLL F
Sbjct: 504 RLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELISLLAF 563
Query: 333 ILPDIFS-SLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV 391
ILP +F L+ F + S+ + L E+R V++ ++ PF+LRR KS V
Sbjct: 564 ILPHVFDYGLKSLDVIFTMKKSPESDFERALLSEQR----VSRAKMMMAPFVLRRKKSQV 619
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLR-EKVFSAGRGMKGKLNN------ 444
LP+K II + +E +R D +K N L E V L
Sbjct: 620 LDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKSTAG 679
Query: 445 -LMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQ 478
++VQLRK +HP L + D + I+ +
Sbjct: 680 FVLVQLRKLADHPMLFRIHYKDDILRQMAKAIMNE 714
Score = 270 (100.1 bits), Expect = 7.4e-75, Sum P(2) = 7.4e-75
Identities = 56/136 (41%), Positives = 83/136 (61%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+V++FSQ+T++LDI++ + R DGS ++D R+ I F + S +FLLST+
Sbjct: 779 RVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFY-ADESINVFLLSTK 837
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGG GINL A+ ILYD +NP DLQA DR HR+GQ K V VY+ ++E I +
Sbjct: 838 AGGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRL 897
Query: 618 AFSKLKLEHVVIGKGQ 633
A +K+ L+ + G +
Sbjct: 898 ANAKIALDATLSGNAE 913
>SGD|S000000017 [details] [associations]
symbol:FUN30 "Snf2p family member with ATP-dependent
chromatin remodeling activity" species:4932 "Saccharomyces
cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0070870
"heterochromatin maintenance involved in chromatin silencing"
evidence=IGI;IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=IMP] [GO:0031934 "mating-type region
heterochromatin" evidence=IPI] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IMP] [GO:0006348 "chromatin silencing
at telomere" evidence=IMP] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0070869 "heterochromatin assembly
involved in chromatin silencing" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SGD:S000000017 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0000775 EMBL:L05146 EMBL:BK006935 GO:GO:0003677 GO:GO:0003682
GO:GO:0030466 GO:GO:0000183 GO:GO:0006348 GO:GO:0004386
GO:GO:0031934 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0070869 GO:GO:0000729
GO:GO:0008094 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
PIR:S22266 RefSeq:NP_009383.1 ProteinModelPortal:P31380 SMR:P31380
DIP:DIP-2541N IntAct:P31380 MINT:MINT-425278 STRING:P31380
PaxDb:P31380 PeptideAtlas:P31380 EnsemblFungi:YAL019W GeneID:851214
KEGG:sce:YAL019W CYGD:YAL019w GeneTree:ENSGT00630000089890
OMA:KIEPYYG NextBio:968097 Genevestigator:P31380 GermOnline:YAL019W
GO:GO:0070870 Uniprot:P31380
Length = 1131
Score = 499 (180.7 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 121/333 (36%), Positives = 181/333 (54%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLST 215
LK YQ G+ WL L+QN ++ ILAD MGLGKT Q I+F A+LK GP+LV+ P ST
Sbjct: 572 LKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINEPGPHLVVVPSST 631
Query: 216 LSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDAR-- 273
L NW+ E +F P++ Y+GS +ER+E+R + R G K+ ++VT+Y +A +
Sbjct: 632 LENWLREFQKFAPALKIEPYYGSLQEREELR-DILERNAG-KYDVIVTTYNLAAGNKYDV 689
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
+L++ N+ +V DEGH LKN + +L I +LLLTGTPLQNNL EL SLL FI
Sbjct: 690 SFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFI 749
Query: 334 LPDIF-SSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+P++F S E F + F K + + + + + +++PF+LRR K V
Sbjct: 750 MPNLFISKKESFDAIFKQRAKTTDD--NKNHNPLLAQEAITRAKTMMKPFILRRRKDQVL 807
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENH--LREKVFSAGRGMKGKLN-----NL 445
+ LP K I Y + Q+ D I LE+ +++ K KL NL
Sbjct: 808 KHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDAKEKSKLQSSSSKNL 867
Query: 446 MVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQ 478
++ LRK HP L + ++D + I+++
Sbjct: 868 IMALRKASLHPLLFRNIYNDKIITKMSDAILDE 900
Score = 277 (102.6 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 56/131 (42%), Positives = 86/131 (65%)
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
KVL+FS +T++LDI+E + Y+ R+DGS ++++R+ I F + + IF+LST+
Sbjct: 968 KVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYE-DKDIPIFILSTK 1026
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
AGG GINL A+ I++D +NP D QA DR HR+GQTK V++ L T S+E +I +
Sbjct: 1027 AGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQL 1086
Query: 618 AFSKLKLEHVV 628
A +KL L+ +
Sbjct: 1087 AKNKLALDSYI 1097
Score = 40 (19.1 bits), Expect = 1.3e-74, Sum P(3) = 1.3e-74
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 37 NVEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESE 89
N + V ++ED +D+ +D+ L Q++ + E+ ED N E++ E
Sbjct: 472 NTTKPKVVEDED--DDVDLEAIDDELPQSEHEDDDYEEEDEDY--NDEEEDVE 520
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 748 (268.4 bits), Expect = 5.2e-73, P = 5.2e-73
Identities = 184/494 (37%), Positives = 267/494 (54%)
Query: 150 LLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLV 209
++TGG++ YQ G+ WL W N ILAD+MGLGKTIQ I LA L + P+L+
Sbjct: 600 IMTGGEIMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLVQDHKCWPFLI 659
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGP--KFPIVVTSYEV 267
+ P ST NW E+ +VPS+ A+ Y+GS R + M P + +V+TSYE
Sbjct: 660 VVPNSTCPNWRKELKTWVPSLRAVTYYGSSLARKMAQEHEMFIRGDPDLRCHVVITSYET 719
Query: 268 ALSDA-RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ D+ RK L W L+VDEG RLK+ K ++ + L + K+L+TGTPLQNN EL
Sbjct: 720 MVDDSCRKVLSRIPWAGLIVDEGQRLKSDKSQIYEGLSKMKFPFKVLMTGTPLQNNTKEL 779
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
++LL F D + EE + + + KE + E LH ++RPF LRR
Sbjct: 780 FNLLQFC--DQSKNAEELEEKY-------GTLSKENIPE---------LHELIRPFFLRR 821
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAG---RGMKG--- 440
K+ V LP +II+ TM+ Q+ ++ K + L + +F + +K
Sbjct: 822 TKAQVLTFLPPVVQIIVPVTMSVLQKKLYKSILAKNTQ--LIKAIFQRNEEDQPLKQTER 879
Query: 441 -KLNNLMVQLRKNCNHPDLLESAFSDSCFYPPV--EQIVEQCGKXXXXXXXXXXXXXXNH 497
LNN+++QLRK HP + A + P V +V+ GK H
Sbjct: 880 HNLNNILMQLRKCLCHPFIFSKAIEERTDDPEVAHRNLVDAAGKLQLLELMLPKLQARGH 939
Query: 498 KVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTR 557
+VLVFSQ+ + LD+ME + + G R+DG + E++R I D+N NS Y FLLSTR
Sbjct: 940 RVLVFSQFLENLDVMEDFLDGLGLPHRRLDGRMTSLEKQRMIDDYNAENSPYFAFLLSTR 999
Query: 558 AGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKR 617
+GG+GINL ADT I+ D D+NP D+QA+ R HRIGQ V V++L S E +I++
Sbjct: 1000 SGGVGINLATADTVIIMDPDFNPHQDMQALSRAHRIGQKNKVLVFQLMIRGSAEEKIMQI 1059
Query: 618 AFSKLKLEHVVIGK 631
K+ L+HV+I +
Sbjct: 1060 GRKKMVLDHVLIDR 1073
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 734 (263.4 bits), Expect = 1.6e-71, P = 1.6e-71
Identities = 188/493 (38%), Positives = 266/493 (53%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYL 208
S + GG L YQLKG+ WL W ILAD+MGLGKT+Q I+F++ L P L
Sbjct: 549 SFIKGGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCFPVL 608
Query: 209 VIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVA 268
VI P +T++NW E+ ++ P + + GS+K R +R R I K P V+++ +
Sbjct: 609 VIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDY---RLINQKDPKHVSTHVLV 665
Query: 269 LSDAR-----KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
+S + LR + WK L+VDEG RLKN + L L + KLLLTGTPLQNN+
Sbjct: 666 ISASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNV 725
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
EL++LL F+ P ++ E L K S + E++ E LH IL+PF
Sbjct: 726 RELFNLLQFLNPMKINAAE-------LE-KRYSIIDTEKVTE---------LHQILKPFF 768
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE-----KVFSAGRGM 438
LRR+KS+V P K E+I+ +MT Q+ +++K L + LR S+G
Sbjct: 769 LRRVKSEVLDNFPTKVEVIIPLSMTPVQKGLYKSILSKNL-SLLRNITGYANTSSSGGQR 827
Query: 439 KGKLNNLMVQLRKNCNHPDLLESAFSDSCF-YPPVEQIVEQCG-KXXXXXXXXXXXXXXN 496
LNN+++QLRK HP + D Y + +E+ K
Sbjct: 828 TTSLNNILMQLRKTLAHPYIYSPDIEDRNLPYELAMRSLEEASCKFLILRLLVPKLITRG 887
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
H++L+FSQ+ + LDI+E +F K R DG+ ER+ I FN NS FLLST
Sbjct: 888 HRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLST 947
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGG+GINL +ADT I+ D D+NP D+QA+ R HR GQ K V V+ L T SVE +I++
Sbjct: 948 RAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQ 1007
Query: 617 RAFSKLKLEHVVI 629
A KL L+H+++
Sbjct: 1008 NAQKKLVLDHLIV 1020
>CGD|CAL0000882 [details] [associations]
symbol:orf19.607 species:5476 "Candida albicans" [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000882 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000108 HOGENOM:HOG000170952 KO:K10841
RefSeq:XP_714234.1 ProteinModelPortal:Q59XB8 STRING:Q59XB8
GeneID:3644142 KEGG:cal:CaO19.607 Uniprot:Q59XB8
Length = 1055
Score = 579 (208.9 bits), Expect = 2.1e-71, Sum P(2) = 2.1e-71
Identities = 145/443 (32%), Positives = 224/443 (50%)
Query: 195 LAHLKGNGLHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAI 254
+ H G+G++G S L ++ P + HG K + I + + +
Sbjct: 350 ILHSIGSGMNGS----VSESKLEEYLESTD---PDATQSSLHGIKSQ---INAQEIVDRV 399
Query: 255 GPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLL 314
K ++VT+Y V L K++ W Y+V+DEGH+++NP + K I N+++L
Sbjct: 400 MEKGHVLVTTY-VGLRIYSKHILPREWGYVVLDEGHKIRNPDSDISLTCKKIKTVNRIIL 458
Query: 315 TGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK 374
+GTP+QNNL ELWSL F+ P +L FQ F + L+ K +
Sbjct: 459 SGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINIGGYANSNNLQVKTAYKCAVV 518
Query: 375 LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSA 434
L ++ P++LRR+KSDV Q LP+K E++L+ +T+ Q L L++ E +
Sbjct: 519 LRDLISPYMLRRLKSDVAQDLPKKNEMVLFVKLTK----IQQELYESFLQSEDLESI--- 571
Query: 435 GRGMKGKLNNLM-VQ-LRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXX 492
+KGK N LM V LRK CNHPDL+ + D+ + GK
Sbjct: 572 ---LKGKRNVLMGVDILRKICNHPDLV---YRDTLMKRKNYGDPAKSGKMQVLKNLLRLW 625
Query: 493 XXXNHKVLVFSQWTKILDIMEYY------FNEKGYEVCRIDGSVRLDERKRQIQDFNDVN 546
NHK L+F Q ++LDI+E + N + R+DGS + +R+ + FN +
Sbjct: 626 QSENHKTLLFCQTRQMLDILEKFVANLSLINGGDFNYLRMDGSTPISKRQMLVDAFNQ-D 684
Query: 547 SSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLAT 606
+FLL+T+ GGLG+NLT AD I+YD DWNP D+QA +R R+GQ + + +YRL T
Sbjct: 685 PDMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMT 744
Query: 607 AQSVEGRILKRAFSKLKLEHVVI 629
S+E +I R K L + ++
Sbjct: 745 TGSIEEKIYHRQIFKTFLTNKIL 767
Score = 179 (68.1 bits), Expect = 2.1e-71, Sum P(2) = 2.1e-71
Identities = 39/82 (47%), Positives = 50/82 (60%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGL-HGPYLVIAPLS 214
L YQ V+WL L+ GI+ D+MGLGKTIQ I+FLA L +GL P LV+ P +
Sbjct: 271 LFDYQKTCVQWLWELYTQKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLDKPVLVVVPAT 330
Query: 215 TLSNWVNEISRFVPSVSAIIYH 236
L+ WVNE R+ P + II H
Sbjct: 331 VLNQWVNEFHRWWPPLRCIILH 352
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 126/280 (45%), Positives = 193/280 (68%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K +
Sbjct: 155 ESPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIP 214
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP++V+ P STL NW+NE R+VP++ A+ G K +R R + + ++ + VTS
Sbjct: 215 GPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVL---LPGEWDVCVTS 271
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
YE+ + + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL
Sbjct: 272 YEMLIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLH 330
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLL 384
ELW+LL+F+LPD+F+S E+F SWFD + C L +++ +V +LH +LRPFLL
Sbjct: 331 ELWALLNFLLPDVFNSSEDFDSWFD-TNNC--------LGDQK---LVERLHMVLRPFLL 378
Query: 385 RRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
RR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 379 RRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 418
Score = 547 (197.6 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 120/340 (35%), Positives = 191/340 (56%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE-SEPVXXXXXXX 98
QE E+ + + N+ + LL QT+++A F+ + + ++ + P
Sbjct: 59 QEADPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQ 118
Query: 99 XXXXAAPQCNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKS 158
+ R + +LT S V E S + GKL+
Sbjct: 119 NLLSVGDYRHRRTEQEEDEELLTESSKTT-----------NVCTRFEESPSYVKWGKLRD 167
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPLSTLS 217
YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP++V+ P STL
Sbjct: 168 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 227
Query: 218 NWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLR 277
NW+NE R+VP++ A+ G K +R R + + ++ + VTSYE+ + + + +
Sbjct: 228 NWMNEFKRWVPTLRAVCLIGDKDQRAAFVRDVL---LPGEWDVCVTSYEMLIKE-KSVFK 283
Query: 278 HYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDI 337
+NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL ELW+LL+F+LPD+
Sbjct: 284 KFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDV 343
Query: 338 FSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHA 377
F+S E+F SWFD + + + E L R ++ ++ A
Sbjct: 344 FNSSEDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKA 383
Score = 192 (72.6 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 40/93 (43%), Positives = 64/93 (68%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 364 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 419
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESA 462
+ SAG+ K +L N+++QLRK CNHP L + A
Sbjct: 420 -LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGA 451
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 734 (263.4 bits), Expect = 3.4e-71, P = 3.4e-71
Identities = 178/502 (35%), Positives = 277/502 (55%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPY 207
S ++ G L+ YQ++G+ WL+ W N N ILAD+MGLGKTIQTI+FL++L + GP+
Sbjct: 748 SWISAGTLRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFNEQDIKGPF 807
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
LV+ PLST+ NW E +++ P+++ I+Y G+ + RD IR + ++ V
Sbjct: 808 LVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFYTT--NRLGKKKLNFNV 865
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
L+ L+ N L + L + LK + + + L L T N L
Sbjct: 866 LLTTYDFILKDKNT--LGTIKWEFLAVDEAHRLKNSESV-LHEVLKLYNTT--NRLLVTG 920
Query: 328 SLLHFILPDIFSSLEEFQSWFDLSGKCNS-EVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
+ L L ++++ L F + K S + +++ + + +A+LH++L+P LLRR
Sbjct: 921 TPLQNSLKELWNLLN-----FLMPNKFTSLKDFQDQYSDLKENDQIAQLHSVLKPHLLRR 975
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLM 446
+K DVE+ LP K E IL ++ Q+ + ++ K + + G+G K L N+M
Sbjct: 976 IKKDVEKSLPPKTERILRVDLSNVQKKYYKWILTKNFQE------LNKGKGEKTTLLNIM 1029
Query: 447 VQLRKNCNHPDLLESAFSDSCFYPP---VEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFS 503
+L+K CNHP L ++A D C ++ ++ GK H+VL+FS
Sbjct: 1030 TELKKTCNHPYLYQNA-RDECELGAKDLLDSMIRASGKLVLLDKLLIRLKETGHRVLIFS 1088
Query: 504 QWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGI 563
Q ++LDI+ Y + ++ R+DGS+ ++R + + FN V+S FLLST+AGGLGI
Sbjct: 1089 QMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAMDRFNAVDSPDFCFLLSTKAGGLGI 1148
Query: 564 NLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLK 623
NL+ ADT I++DSDWNPQ DLQA R HRIGQ V++YRL + SVE IL+RA K+
Sbjct: 1149 NLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHVNIYRLVSKSSVEEDILERAKQKMV 1208
Query: 624 LEHVVIG---KGQFHQERTKSN 642
L+H+VI K Q + T +N
Sbjct: 1209 LDHLVIQTMEKSQTAKSNTPNN 1230
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 441 (160.3 bits), Expect = 7.9e-71, Sum P(2) = 7.9e-71
Identities = 117/330 (35%), Positives = 178/330 (53%)
Query: 156 LKSYQLKGVKWLISLWQNGLNG-ILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAPL 213
LK YQL GV +L+ L++ G+ G ILAD+MGLGKTIQ I +L L N GP+LV+ P
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIG--PKFPIVVTSYEV---- 267
S L NW E+ ++ PS + + YHG+ + + +A G P F +++ Y +
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAARAAYSRELNSLSKA-GKPPPFNVLLVCYSLFERH 331
Query: 268 --ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIP--IGNKLLLTGTPLQNNL 323
D RK L+ + W +++DE H LK+ K L + +L+LTGTPLQN+L
Sbjct: 332 SEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTPLQNDL 391
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSLL F+LPDIF++ E DL N+E + E ++ ++ +IL PF+
Sbjct: 392 HELWSLLEFMLPDIFTT-ENV----DLKKLLNAE----DTE------LITRMKSILGPFI 436
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLR------EKVFSAGR 436
LRR+KSDV Q L K + + Y M Q + +++ + + R + + S +
Sbjct: 437 LRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAK 496
Query: 437 GM-KGKLNNLMVQLRKNCNHPDLLESAFSD 465
+ K +++N Q RK NHP L+ +SD
Sbjct: 497 ALPKRQISNYFTQFRKIANHPLLIRRIYSD 526
Score = 340 (124.7 bits), Expect = 7.9e-71, Sum P(2) = 7.9e-71
Identities = 68/136 (50%), Positives = 94/136 (69%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
H+VL+FSQWT +LDI+E+ + G R+DGS ++ +R+ + FN+ S + LLST
Sbjct: 605 HRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFAC-LLST 663
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGG G+NLT ADT I++D D+NPQ+D QA DRCHRIGQTKPV ++RL T +V+ I +
Sbjct: 664 RAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYE 723
Query: 617 RAFSKLKLEHVVIGKG 632
A KL L+ V+ G
Sbjct: 724 IAKRKLVLDAAVLESG 739
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 464 (168.4 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 96/269 (35%), Positives = 166/269 (61%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLS 214
+++YQL G+ W+ L++ +NGILAD+MGLGKT+QTI+ LAH+K +GP+LV+ P +
Sbjct: 542 MRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHIKEAYNDNGPHLVVVPAT 601
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA-R 273
L+NW E + PS+S + Y+G+ +ER+E+R + + G F +++T+Y + ++ R
Sbjct: 602 ILANWEREFQTWCPSLSIVRYYGNLREREELRYELKKKRPGKDFNVILTTYNLLFANNDR 661
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
+L+ +++ +L++DE +KN K K + I ++LLLTGTPLQNNL ELWSLL+F+
Sbjct: 662 GFLKRFDYSFLILDEAQNIKNSDSKRYKNIFKIGAHHRLLLTGTPLQNNLYELWSLLNFL 721
Query: 334 LPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQ 393
+P IF S+++ + + N + + + + ++ IL PF+LRR+KS V +
Sbjct: 722 MPHIFGSVKKDNYLLNQLLEYNGD----DCDSA-----ITRMKKILSPFILRRLKSTVSK 772
Query: 394 MLPRKKEIILYATMTEHQRNFQDHLINKT 422
L K E + + + Q ++I ++
Sbjct: 773 ELKPKIEHVEICKLPKFQDETYKNIIERS 801
Score = 314 (115.6 bits), Expect = 2.9e-70, Sum P(2) = 2.9e-70
Identities = 75/189 (39%), Positives = 104/189 (55%)
Query: 453 CNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNH-KVLVFSQWTKILDI 511
C H DL D ++ P EQ +E K N KVL+FSQ T++LDI
Sbjct: 963 CEHEDL-----GDK-YWIPDEQFIETSTKCLKLKEILAKEIGVNKSKVLIFSQMTRVLDI 1016
Query: 512 MEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTC 571
+E + GY R+DGS ++ER+ I F+ + +FLLST +GGLGINLT A+
Sbjct: 1017 LEDVLDIFGYNFTRLDGSTPVNERQSIIDHFSS-KETIPVFLLSTNSGGLGINLTCANVV 1075
Query: 572 ILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGK 631
I YD +NPQ+D QA DR HR+GQ + V +Y+L +V+ I + A K KL V+ +
Sbjct: 1076 IFYDLSFNPQVDRQAEDRAHRLGQEREVIIYKLLAENTVDINIHESANQKKKLNDNVLEE 1135
Query: 632 GQFHQERTK 640
G F+ TK
Sbjct: 1136 GTFNNAETK 1144
Score = 73 (30.8 bits), Expect = 6.9e-27, Sum P(2) = 6.9e-27
Identities = 31/114 (27%), Positives = 56/114 (49%)
Query: 355 NSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNF 414
N ++K+E EEK + + + +++ +R S + + +K+ I+
Sbjct: 809 NELLLKKEKEEKEKEKQ-SLINSSNSSIKKKRKTSSIYKNNKIEKDEIIEID----DGGD 863
Query: 415 QDHLINKTLENHLRE-----KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAF 463
D LI+ T N ++ K+ S G G + LNN+++QLRK NHP L ++ F
Sbjct: 864 DDGLIDLTKTNDEKDMELSIKLKSNGSG-QFVLNNILMQLRKAANHPLLCKNIF 916
Score = 40 (19.1 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 621 KLKLEHVVIGKGQFHQERTKSNCI 644
K K+EHV I K Q+ T N I
Sbjct: 775 KPKIEHVEICKLPKFQDETYKNII 798
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 669 (240.6 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 140/323 (43%), Positives = 204/323 (63%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKLK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+IA LAHL + + GP+L+I+P
Sbjct: 516 GKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISP 575
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPK---FPIVVTSYEVAL 269
STL+NW E +RFVP + Y G+ +R IRR + + + F +V+TSY++ +
Sbjct: 576 ASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITSYQLVV 635
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D KY + W+Y+V+DE LK+ K L N+LLLTGTP+QN +AELW+L
Sbjct: 636 QDV-KYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQNTMAELWAL 694
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
LHFI+P +F S EEF WF + ++E K ++E + +++LH IL+PF+LRR+K
Sbjct: 695 LHFIMPTLFDSHEEFNEWFSKDIESHAE-NKSAIDENQ----LSRLHMILKPFMLRRIKK 749
Query: 390 DVEQMLPRKKEIILYATMTEHQRNFQDHLINK-TLENHLREKVFSAGRGMK--GKLNNLM 446
DVE L K EI++Y +T Q+ L NK ++E+ L+ + S + L NL+
Sbjct: 750 DVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLV 809
Query: 447 VQLRKNCNHPDLLESAFSDSCFY 469
+Q RK CNHP+L E + S F+
Sbjct: 810 MQFRKVCNHPELFERQETWSPFH 832
Score = 68 (29.0 bits), Expect = 1.8e-69, Sum P(2) = 1.8e-69
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++YA F+ K D+ +G+++E
Sbjct: 381 QQRKLNFLITQTELYAHFMSRK-RDMGHDGIQEE 413
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 709 (254.6 bits), Expect = 6.9e-69, P = 6.9e-69
Identities = 194/574 (33%), Positives = 304/574 (52%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPL 213
G L YQL+G+ +L W + ILAD+MGLGKTIQ+IA LA L L P+LVIAPL
Sbjct: 271 GLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI-PHLVIAPL 329
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDAR 273
STL NW E + + P ++ ++Y G+ + R IR + K S +++ +
Sbjct: 330 STLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQ 389
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKY----IPIGNKLLLTGTPLQNNLAELWSL 329
K + K+ V+ + + N +LK +K+ + G++L + L ++L + +S
Sbjct: 390 KRI-----KFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQ-YSS 443
Query: 330 LHFIL---PDIFSSLEE-FQSWFDL-SGKCNS-EVMKEELEEKRRGQMVAKLHAILRPFL 383
H IL + ++L+E F L +GK S E +EE ++ + + +++LH +L P L
Sbjct: 444 NHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKDINQEEQISRLHKMLAPHL 503
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN 443
LRR+K DV + +P KKE+IL ++ Q+ + + + N+ +V + G + LN
Sbjct: 504 LRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTR---NY---QVLTKKGGAQISLN 557
Query: 444 NLMVQLRKNCNHPDLLESAFSDSCFYPPVE---QIVEQCGKXXXXXXXXXXXXXXNHKVL 500
N+M++LRK C HP +LE + + E Q++E CGK H+VL
Sbjct: 558 NIMMELRKVCCHPYMLEGV--EPVIHDANEAFKQLLESCGKLQLLDKMMVKLKEQGHRVL 615
Query: 501 VFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGG 560
+++Q+ +LD++E Y K ++ RIDG V ER+ +I FN NS+ FLLSTRAGG
Sbjct: 616 IYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGG 675
Query: 561 LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFS 620
LGINL ADT I+YDSDWNP DLQAM R HR+GQT V +YRL ++E R+++
Sbjct: 676 LGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQLTKK 735
Query: 621 KLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQTDIGEEDLERVL 680
K+ LEH+V+GK + + K + + ++++L
Sbjct: 736 KMVLEHLVVGK--LKTQNINQEELDDIIRYGSKELFASEDDEAGKSGKIHYDDAAIDKLL 793
Query: 681 DRADLIAG---CLDDEEKPNAAVYPLKGPGWEVV 711
DR DL+ +DDEE+ N + K +E +
Sbjct: 794 DR-DLVEAEEVSVDDEEE-NGFLKAFKVANFEYI 825
>SGD|S000003796 [details] [associations]
symbol:RAD26 "Protein involved in transcription-coupled
nucleotide excision repair" species:4932 "Saccharomyces cerevisiae"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IGI;IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 SGD:S000003796 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006283 GO:GO:0008094
GeneTree:ENSGT00590000083118 HOGENOM:HOG000170952 KO:K10841
EMBL:X81635 EMBL:L26910 EMBL:Z49535 PIR:JC2227 RefSeq:NP_012569.1
ProteinModelPortal:P40352 SMR:P40352 DIP:DIP-3008N IntAct:P40352
MINT:MINT-439055 STRING:P40352 PaxDb:P40352 PeptideAtlas:P40352
EnsemblFungi:YJR035W GeneID:853492 KEGG:sce:YJR035W CYGD:YJR035w
OMA:DENRIME OrthoDB:EOG44TSGZ NextBio:974125 Genevestigator:P40352
GermOnline:YJR035W Uniprot:P40352
Length = 1085
Score = 548 (198.0 bits), Expect = 6.9e-69, Sum P(2) = 6.9e-69
Identities = 126/375 (33%), Positives = 206/375 (54%)
Query: 260 IVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPL 319
I++T+Y V L L W+Y V+DEGH+++NP ++ K + N+++L+GTP+
Sbjct: 443 ILITTY-VGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPI 501
Query: 320 QNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAIL 379
QNNL ELWSL FI P +L FQ F + ++ + + L ++
Sbjct: 502 QNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLI 561
Query: 380 RPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMK 439
P+LLRR+K+DV + LP+KKE++L+ +T++QR+ ++ + N ++ G +
Sbjct: 562 SPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQN-------GKR 614
Query: 440 GKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKV 499
L + + LRK CNHPDLL+ D+ + P ++ GK +K
Sbjct: 615 NVLFGIDI-LRKICNHPDLLDR---DTKRHNPDYGDPKRSGKMQVVKQLLLLWHKQGYKA 670
Query: 500 LVFSQWTKILDIMEYYFNEKGYEVC-----RIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
L+F+Q ++LDI+E + + K ++ R+DG+ + R+ + FN N S+ +FLL
Sbjct: 671 LLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFN--NESFDVFLL 728
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
+TR GGLG+NLT A+ I++D DWNP D+QA +R RIGQ + V +YRL S+E +I
Sbjct: 729 TTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKI 788
Query: 615 LKRAFSKLKLEHVVI 629
R K L + ++
Sbjct: 789 YHRQIFKQFLTNRIL 803
Score = 188 (71.2 bits), Expect = 6.9e-69, Sum P(2) = 6.9e-69
Identities = 39/92 (42%), Positives = 54/92 (58%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGL-HGPYLVIAPLS 214
L +YQ V+WL L+Q GI+ D+MGLGKTIQ IAF+A L +GL GP L++ P +
Sbjct: 297 LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPAT 356
Query: 215 TLSNWVNEISRFVPSVSAIIYH--GSKKERDE 244
+ W NE + P + +I H GS D+
Sbjct: 357 VMKQWCNEFQHWWPPLRTVILHSMGSGMASDQ 388
Score = 40 (19.1 bits), Expect = 2.7e-53, Sum P(2) = 2.7e-53
Identities = 12/54 (22%), Positives = 22/54 (40%)
Query: 121 TRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKSYQLKGVKWLISLWQNG 174
TR+K +V + L++ G ++ S +L VKW ++ G
Sbjct: 418 TRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEG 471
>DICTYBASE|DDB_G0281441 [details] [associations]
symbol:ercc6 "DNA excision repair protein 6"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006289 "nucleotide-excision repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0281441 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000152_GR GO:GO:0003677
EMBL:AAFI02000041 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006289 GO:GO:0008094 KO:K10841
RefSeq:XP_640679.1 ProteinModelPortal:Q54TY2 STRING:Q54TY2
EnsemblProtists:DDB0232361 GeneID:8623063 KEGG:ddi:DDB_G0281441
InParanoid:Q54TY2 OMA:NIHKERW ProtClustDB:CLSZ2736745
Uniprot:Q54TY2
Length = 1655
Score = 704 (252.9 bits), Expect = 3.9e-68, P = 3.9e-68
Identities = 160/479 (33%), Positives = 264/479 (55%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLS 214
L YQ+ V+WL L GI+ D+MGLGKT+Q ++FLA L L GP L++AP +
Sbjct: 795 LFEYQVTCVRWLYELHCQETGGIVGDEMGLGKTVQIVSFLASLHYSRRLGGPALIVAPAT 854
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKE---RDEIRRKHMPRAIGPKFPIVVTSYEVALSD 271
LSNW+ E ++ P ++H S D ++ + + I K I++T+++ ++
Sbjct: 855 LLSNWIKEFHKWWPPFRVGLFHSSGSGGGGNDGSDKEDIVKKIAEKGHILLTTFD-SIRI 913
Query: 272 ARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLH 331
++ L Y+W+Y+++DEGH+++NP ++ K + ++++L+G+P+QN L ELWSL
Sbjct: 914 NQEILLKYHWEYVILDEGHKIRNPDAEITLSCKQLQTPHRVILSGSPIQNKLTELWSLFD 973
Query: 332 FILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDV 391
F+ P +L F+S F L ++ + + L ++ P++LRR+KSDV
Sbjct: 974 FVFPGRLGTLPIFKSQFSLPISVGGFANASPIQVQAAYKCAVALRDLISPYMLRRVKSDV 1033
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRK 451
+ LP K E +L +T FQ+ L + L+++ + V G + L + + L+K
Sbjct: 1034 LKSLPSKNEQVLMCPLTP----FQEKLYLEFLDSNDIKSVLD---GRRNALYGIDI-LKK 1085
Query: 452 NCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDI 511
CNHPD+L SD P +E+ K KVL+F Q ++LDI
Sbjct: 1086 ICNHPDILHMDASDED-RPHDYGNIERSAKLKVVETILPLWFKQGDKVLLFCQTRQMLDI 1144
Query: 512 MEYYFNEKG-YEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADT 570
+E Y + + R+DG+ + +R+ ++ FN ++ S IFLL+T+ GGLG+NLT A+
Sbjct: 1145 VEQYIRDSTQFNYLRMDGTTSIRQRQCLVEQFN-IDPSLFIFLLTTKVGGLGLNLTGANR 1203
Query: 571 CILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVI 629
IL+D DWNP D+QA +R +RIGQ K V +YRL T ++E +I R K L + ++
Sbjct: 1204 VILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQIYKQFLTNKIL 1262
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 670 (240.9 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 132/272 (48%), Positives = 190/272 (69%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-KGNGLHGPYLVIAP 212
GKL+ YQL G+ WLI L++NG+NGILAD+MGLGKT+QTI+ LA+L + G++GP++V+AP
Sbjct: 192 GKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAP 251
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
STL NW+NEI RF P + A+ + G+ +ER IR + + + KF I VTS+E+A+ +
Sbjct: 252 KSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREELL---VAGKFDICVTSFEMAIKE- 307
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
+ LR ++W+Y+++DE HR+KN L K ++ +LL+TGTPLQNNL ELW+LL+F
Sbjct: 308 KTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNF 367
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+LP++FSS E F WF +SG E + ++V +LH +LRPFLLRR+KSDVE
Sbjct: 368 LLPEVFSSAETFDEWFQISG------------ENDQQEVVQQLHKVLRPFLLRRLKSDVE 415
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+ LP KKE IL M++ Q+ + L+ K LE
Sbjct: 416 KGLPPKKETILKVGMSQMQKQYYKALLQKDLE 447
Score = 591 (213.1 bits), Expect = 1.2e-58, Sum P(2) = 1.2e-58
Identities = 125/275 (45%), Positives = 173/275 (62%)
Query: 365 EKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
E + ++V +LH +LRPFLLRR+KSDVE+ LP KKE IL M++ Q+ + L+ K LE
Sbjct: 388 ENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 447
Query: 425 NHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXX 484
V + G G + +L N+ +QLRK CNHP L + A Y + +V GK
Sbjct: 448 ------VVNGG-GERKRLLNIAMQLRKCCNHPYLFQGA-EPGPPYTTGDHLVTNAGKMVL 499
Query: 485 XXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFND 544
+ +VL+FSQ T++LDI+E Y +GY+ CRIDG+ DER I+ +N
Sbjct: 500 LDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDASIEAYNK 559
Query: 545 VNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRL 604
S +FLLSTRAGGLGINL AD ILYDSDWNPQ+DLQA DR HRIGQ K V V+R
Sbjct: 560 PGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRF 619
Query: 605 ATAQSVEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
T ++E ++++RA+ KL L+ +VI +G+ +++T
Sbjct: 620 CTENAIEAKVIERAYKKLALDALVIQQGRLAEQKT 654
Score = 46 (21.3 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 10/34 (29%), Positives = 21/34 (61%)
Query: 38 VEQENVSKNEDHLNDLQFNKLDELLTQTQMYAEF 71
++ +N S + D +N+ ++ LL QT+++A F
Sbjct: 104 LDSQNASIDAD-MNNKGKGRIKYLLQQTELFAHF 136
>POMBASE|SPCP25A2.02c [details] [associations]
symbol:rhp26 "SNF2 family helicase Rhp26" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCP25A2.02c GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003677 GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006283
HOGENOM:HOG000170952 KO:K10841 OrthoDB:EOG44TSGZ EMBL:AB022912
PIR:T50449 RefSeq:NP_588091.1 ProteinModelPortal:Q9UR24
STRING:Q9UR24 EnsemblFungi:SPCP25A2.02c.1 GeneID:2539473
KEGG:spo:SPCP25A2.02c NextBio:20800635 Uniprot:Q9UR24
Length = 973
Score = 553 (199.7 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 134/388 (34%), Positives = 204/388 (52%)
Query: 248 KHMPRAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIP 307
K++ ++ + I++T+Y L + W Y V+DEGH+++NP ++ K I
Sbjct: 403 KNLVESVFTRGHILITTY-AGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIR 461
Query: 308 IGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKR 367
N+++L+GTP+QNNL ELW+L F+ P +L FQ+ F L ++ +
Sbjct: 462 TVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQT 521
Query: 368 RGQMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENH 426
+ L ++ P+LLRRMK DV LP+K E +L+ +T QR +QD L ++
Sbjct: 522 AYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQDFLQGSDMQ-- 579
Query: 427 LREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAF----SDSCFYPPVEQIVEQCGKX 482
K+ + R M L + + LRK CNHPDL+ + D + P E+ GK
Sbjct: 580 ---KILNGKRQM---LYGIDI-LRKICNHPDLVTREYLLHKEDYNYGDP-----EKSGKL 627
Query: 483 XXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNE-KGYEVCRIDGSVRLDERKRQIQD 541
H+ L+FSQ ++LDI+E + CR+DGS + R+ + +
Sbjct: 628 KVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVDN 687
Query: 542 FNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHV 601
FN N + +FLL+TR GGLG+NLT AD IL+D DWNP D QA +R R+GQ K V V
Sbjct: 688 FNK-NEYFDVFLLTTRVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVV 746
Query: 602 YRLATAQSVEGRILKRAFSKLKLEHVVI 629
YRL TA ++E +I R K L + ++
Sbjct: 747 YRLMTAGTIEEKIYHRQIFKQFLTNKIL 774
Score = 158 (60.7 bits), Expect = 1.3e-66, Sum P(2) = 1.3e-66
Identities = 43/139 (30%), Positives = 69/139 (49%)
Query: 159 YQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG-LHGPYLVIAPLSTLS 217
YQ+ V+WL L+ GI+ D+MGLGKTIQ ++FL+ L +G P L++ P + +
Sbjct: 280 YQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPATLMK 339
Query: 218 NWVNEISRFVPSVSAIIYH--GSKKERDEIRRKHMPRAIGPKFPIVVTSYEV--ALSDAR 273
WVNE + + ++ H GS + +R++ A + TS ++ A S
Sbjct: 340 QWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASSSFH 399
Query: 274 KYLRHYNWKYLVVDEGHRL 292
+Y + N V GH L
Sbjct: 400 RYAK--NLVESVFTRGHIL 416
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 661 (237.7 bits), Expect = 7.5e-66, Sum P(2) = 7.5e-66
Identities = 132/310 (42%), Positives = 200/310 (64%)
Query: 154 GKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPYLVIAP 212
G ++ YQ+ G+ WLISL +NG++GILAD+MGLGKT+QTI+FL +L+ G+ GP+LVI P
Sbjct: 184 GTMRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHIMGITGPHLVIVP 243
Query: 213 LSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDA 272
STL NW E ++ P V+ ++ G+K+ER + + R + F + +TSYE+ L +
Sbjct: 244 KSTLDNWKREFGKWTPEVNVLVLQGAKEERAALIAE---RLVDESFDVCITSYEMILRE- 299
Query: 273 RKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHF 332
+ +L+ + W+Y+++DE HR+KN + L + ++ N+LL+TGTPLQNN+ ELW+LL+F
Sbjct: 300 KSHLKKFAWEYIIIDEAHRIKNEESSLAQVIRLFNSRNRLLITGTPLQNNIHELWALLNF 359
Query: 333 ILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVE 392
+LPD+F E F WF G+ + V+++ LH +LRPFLLRR+K+DVE
Sbjct: 360 LLPDVFGDSEAFDQWFSGEGQDSDTVVQQ-------------LHRVLRPFLLRRVKADVE 406
Query: 393 QMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKN 452
+ L KKE+ LY MTE QR + ++ K ++ + R K +L N+++QLRK
Sbjct: 407 KSLLPKKEVNLYLKMTEMQRTWYQKILEKDID---AVNGANGKRESKTRLLNIVMQLRKC 463
Query: 453 CNHPDLLESA 462
CNHP L E A
Sbjct: 464 CNHPYLFEGA 473
Score = 548 (198.0 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 119/263 (45%), Positives = 162/263 (61%)
Query: 371 MVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREK 430
+V +LH +LRPFLLRR+K+DVE+ L KKE+ LY MTE QR + ++ K ++
Sbjct: 385 VVQQLHRVLRPFLLRRVKADVEKSLLPKKEVNLYLKMTEMQRTWYQKILEKDID---AVN 441
Query: 431 VFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXX 490
+ R K +L N+++QLRK CNHP L E A Y E +V GK
Sbjct: 442 GANGKRESKTRLLNIVMQLRKCCNHPYLFEGA-EPGPPYTTDEHLVYNSGKMVVLDKLLK 500
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
+VL+FSQ +++LDI+E Y + Y+ RIDG ++R I ++N S
Sbjct: 501 RLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGTAHEDRIAAIDEYNKPGSEKF 560
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+FLL+TRAGGLGINLT AD IL+DSDWNPQ DLQAMDR HRIGQTK V+VYR ++
Sbjct: 561 VFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRAHRIGQTKQVYVYRFLVDNTI 620
Query: 611 EGRILKRAFSKLKLEHVVIGKGQ 633
E ++L+RA KL L+ +VI +G+
Sbjct: 621 EEKVLERAAQKLHLDRLVIQQGR 643
Score = 43 (20.2 bits), Expect = 7.5e-66, Sum P(2) = 7.5e-66
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 576 SDWNPQMDLQAMDRCHRIGQ 595
S+WN + Q ++ CH+ G+
Sbjct: 866 SEWNRRDFQQFVNGCHKFGR 885
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 675 (242.7 bits), Expect = 3.1e-65, P = 3.1e-65
Identities = 171/514 (33%), Positives = 259/514 (50%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLA-----HLKGNGLH----- 204
KL YQ GV+W+ L GIL D+MGLGKTIQ IAFLA LK G +
Sbjct: 483 KLFKYQQTGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYAG 542
Query: 205 -GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP +++ P + + WV E + P + H + + + K +P + I++T
Sbjct: 543 LGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSK-KEKLIPEIVA-SHGILIT 600
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY + + Y++ Y+W Y+++DEGH+++NP + K ++ +L+G+P+QNNL
Sbjct: 601 SYSY-IRIMQDYIQRYDWHYVILDEGHKIRNPNAGVTTACKQFRTPHRFILSGSPMQNNL 659
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSL F+ P +L F F + ++ + + L + P+L
Sbjct: 660 KELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCACVLRDTINPYL 719
Query: 384 LRRMKSDVEQ--MLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLRE--KVFSAGRGM 438
LRRMK+DV+ LP K E +L+ +TE QR +Q L +K + L +VFS
Sbjct: 720 LRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEVYQILNGDMQVFSG---- 775
Query: 439 KGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQ--------CGKXXXXXXXXX 490
++ LRK CNHPDL P +Q+ E+ GK
Sbjct: 776 -------LIALRKICNHPDLFTGG-PRLLRGIPHDQLTEEEHFGYWKRSGKMIVVESLLR 827
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+F+Q ++L+I+E + E G+ ++DG+ + R+ I FN N
Sbjct: 828 LWHKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQFNQ-NKDIF 886
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+F+L+TR GGLG+NLT A+ ++YD DWNP D QA +R RIGQ + V VYRL TA ++
Sbjct: 887 VFILTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTI 946
Query: 611 EGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCI 644
E +I R K L + V+ K + KSN I
Sbjct: 947 EEKIYHRQIFKQFLTNRVL-KDPKQRRFFKSNDI 979
>TAIR|locus:2054011 [details] [associations]
symbol:CHR8 "chromatin remodeling 8" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0010332 "response to
gamma radiation" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0010332 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AC005724 HOGENOM:HOG000170952 KO:K10841 IPI:IPI00524515
PIR:C84568 RefSeq:NP_179466.1 UniGene:At.39947
ProteinModelPortal:Q9ZV43 SMR:Q9ZV43 STRING:Q9ZV43 PaxDb:Q9ZV43
PRIDE:Q9ZV43 EnsemblPlants:AT2G18760.1 GeneID:816391
KEGG:ath:AT2G18760 TAIR:At2g18760 InParanoid:Q9ZV43 OMA:TETSNIF
PhylomeDB:Q9ZV43 ProtClustDB:CLSN2683061 ArrayExpress:Q9ZV43
Genevestigator:Q9ZV43 Uniprot:Q9ZV43
Length = 1187
Score = 540 (195.1 bits), Expect = 3.7e-65, Sum P(2) = 3.7e-65
Identities = 127/383 (33%), Positives = 199/383 (51%)
Query: 252 RAIGPKFPIVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNK 311
R + + +++T+YE K L + W Y V+DEGHR++NP + K + ++
Sbjct: 511 RVLNSESGLLITTYEQLRLQGEKLL-NIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHR 569
Query: 312 LLLTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQM 371
+++TG P+QN L ELWSL F+ P L F++ F + L+ +
Sbjct: 570 IIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRC 629
Query: 372 VAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLREK 430
L ++ P+LLRRMK+DV L +K E +L+ ++T QR+ ++ L + +E +
Sbjct: 630 AVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVE-----Q 684
Query: 431 VFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXX 490
+F G + L + V +RK CNHPDLLE S P E+ GK
Sbjct: 685 IFD---GNRNSLYGIDV-MRKICNHPDLLEREHSHQ---NPDYGNPERSGKMKVVAEVLK 737
Query: 491 XXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYR 550
H+VL+FSQ ++LDI+E + Y R+DG + +R I +FN+ +
Sbjct: 738 VWKQQGHRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMF- 796
Query: 551 IFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSV 610
+F+L+T+ GGLG NLT A+ I++D DWNP D+QA +R RIGQ K V VYRL T ++
Sbjct: 797 VFVLTTKVGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTI 856
Query: 611 EGRILKRAFSKLKLEHVVIGKGQ 633
E ++ R K L + ++ Q
Sbjct: 857 EEKVYHRQIYKHFLTNKILKNPQ 879
Score = 163 (62.4 bits), Expect = 3.7e-65, Sum P(2) = 3.7e-65
Identities = 33/87 (37%), Positives = 49/87 (56%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPLS 214
KL YQ GV+WL L GI+ D+MGLGKTIQ ++FL L + ++ P ++I P++
Sbjct: 384 KLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLHFSKMYKPSIIICPVT 443
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKE 241
L W E ++ P I H S ++
Sbjct: 444 LLRQWRREAQKWYPDFHVEILHDSAQD 470
Score = 50 (22.7 bits), Expect = 5.2e-08, Sum P(2) = 5.2e-08
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 397 RKKEIILYATMTE--------HQRNFQDHLINKTLENHLREKVFSAGRGMK 439
+KK++ +Y +T H++ ++ L NK L+N + + F A R MK
Sbjct: 841 QKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFKA-RDMK 890
Score = 39 (18.8 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 153 GGKL--KSYQLKGVKWLISLWQNGLNGILADQM---GLGKTIQTIAFLAHLKG 200
GG + KS QL+G L S LN + A + + T++ + +A KG
Sbjct: 40 GGSVEEKSTQLEGTNLLSSSQNELLNKLRAVKFEIDAVASTVENVDEIAAEKG 92
>ASPGD|ASPL0000068126 [details] [associations]
symbol:cshA species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 EMBL:BN001304
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000119 HOGENOM:HOG000170952 KO:K10841
OrthoDB:EOG44TSGZ RefSeq:XP_664707.1 ProteinModelPortal:Q5AX77
STRING:Q5AX77 EnsemblFungi:CADANIAT00000362 GeneID:2869817
KEGG:ani:AN7103.2 OMA:HSALEHD Uniprot:Q5AX77
Length = 1193
Score = 526 (190.2 bits), Expect = 5.2e-65, Sum P(2) = 5.2e-65
Identities = 128/417 (30%), Positives = 207/417 (49%)
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDAR 273
S + N +E SR + + G + RK + R + + ++VT+Y L
Sbjct: 483 SGMVNIKSESSREDALMYGTYWSGGSSSGLKAARKVVKRVV-EEGHVLVTTYS-GLQSYA 540
Query: 274 KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFI 333
L W ++DEGH+++NP + K + ++++L+GTP+QNNL ELWSL F+
Sbjct: 541 SLLIPVEWGGTILDEGHKIRNPNTSITMHAKELRTPHRIILSGTPMQNNLTELWSLFDFV 600
Query: 334 LPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQ 393
P +L F++ F+ + L+ + + L + P+LL+R K DV
Sbjct: 601 FPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAA 660
Query: 394 MLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNC 453
LP+K E +L+ +T+ QR + + E++ S RG + L + + LRK C
Sbjct: 661 DLPKKSEQVLFCRLTKPQRQAYEAFLGS-------EEMQSILRGRRQVLYGVDI-LRKIC 712
Query: 454 NHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIME 513
NHPDL + P + GK HK L+F+Q +LDI+E
Sbjct: 713 NHPDLQNHKL---LYAKPNYGNPTKSGKMQVVRSLLELWKETGHKTLLFAQHRIMLDILE 769
Query: 514 YYFNE-KGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCI 572
+ G+ R+DG+ + R+ + +FN + +FLL+T+ GGLG+NLT AD I
Sbjct: 770 KFVKSLSGFNYRRMDGTTPIQHRQTMVDEFNK-DPDLHVFLLTTKVGGLGVNLTGADRVI 828
Query: 573 LYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVI 629
+YD DWNP D+QA +R R+GQ + V +YRL TA ++E +I R K L + ++
Sbjct: 829 IYDPDWNPSTDVQARERAWRLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL 885
Score = 176 (67.0 bits), Expect = 5.2e-65, Sum P(2) = 5.2e-65
Identities = 38/84 (45%), Positives = 48/84 (57%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLK-GNGLHGPYLVIAPLS 214
L YQ GV+W+ L Q + GI+ D+MGLGKTIQ IAFLA L L P +V+ P +
Sbjct: 398 LFDYQKTGVQWMWELHQQQVGGIIGDEMGLGKTIQAIAFLAGLHYSKRLTKPIIVVCPAT 457
Query: 215 TLSNWVNEISRFVPSVSAIIYHGS 238
+ WVNE R+ P I H S
Sbjct: 458 VMKQWVNEFHRWWPPFRVSILHTS 481
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 664 (238.8 bits), Expect = 6.0e-65, Sum P(2) = 6.0e-65
Identities = 173/508 (34%), Positives = 253/508 (49%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-------KGNGLH--- 204
KL YQ GV+WL L GIL D+MGLGKTIQ IAFLA L +G+
Sbjct: 502 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFKG 561
Query: 205 -GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYH--GSKKERDEIRRKHMPRAIGPKFPIV 261
GP +++ P + + WV E + P I H GS ++ E + R I I+
Sbjct: 562 LGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKE----KLIRDIAHCHGIL 617
Query: 262 VTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQN 321
+TSY RH +W Y+++DEGH+++NP + K ++++L+G+P+QN
Sbjct: 618 ITSYSYIRLMQDDISRH-DWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQN 676
Query: 322 NLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
NL ELWSL FI P +L F F + ++ K + L + P
Sbjct: 677 NLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINP 736
Query: 382 FLLRRMKSDVEQML--PRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMK 439
+LLRRMKSDV+ L P K E +L+ +TE Q + I+ ++V+ G
Sbjct: 737 YLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDS-------KEVYRILNGDM 789
Query: 440 GKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQ-----IVEQCGKXXXXXXXXXXXXX 494
+ L V LRK CNHPDL + P ++ ++ GK
Sbjct: 790 QIFSGL-VALRKICNHPDLFSGGPKNLKTIPDDDEEDQFGYWKRSGKMIVVESLLKIWHK 848
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
+VL+FSQ ++LDI+E + + Y ++DG+ + R+ I +N+ S + +FLL
Sbjct: 849 QGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRYNEDTSIF-VFLL 907
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
+TR GG+G+NLT A+ I+YD DWNP D QA +R RIGQ K V VYRL TA ++E +I
Sbjct: 908 TTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 967
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERTKSN 642
R K L + V+ K + KSN
Sbjct: 968 YHRQIFKQFLTNRVL-KDPKQRRFFKSN 994
Score = 39 (18.8 bits), Expect = 6.0e-65, Sum P(2) = 6.0e-65
Identities = 6/13 (46%), Positives = 11/13 (84%)
Query: 107 CNTRKAKRAVAAM 119
CN R A++A+A++
Sbjct: 296 CNKRAARKAIASV 308
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 664 (238.8 bits), Expect = 7.6e-65, Sum P(2) = 7.6e-65
Identities = 174/507 (34%), Positives = 253/507 (49%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-------KGNGLH--- 204
KL YQ GV+WL L GIL D+MGLGKTIQ IAFLA L +G+
Sbjct: 495 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 554
Query: 205 -GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP +++ P + + WV E + P I H + +++ + R I I++T
Sbjct: 555 LGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTH--KKEKLVRDIAHCHGILIT 612
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY RH +W Y+++DEGH+++NP + K ++++L+G+P+QNNL
Sbjct: 613 SYSYIRLMQDDISRH-DWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNL 671
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSL FI P +L F F + ++ K + L + P+L
Sbjct: 672 RELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYL 731
Query: 384 LRRMKSDVEQML--PRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
LRRMKSDV+ L P K E +L+ +T+ Q + I+ ++V+ G
Sbjct: 732 LRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDS-------KEVYRILNGEMQI 784
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCG--KXXXXXXXXXXXXXXNHK- 498
+ L V LRK CNHPDL + P E +Q G K HK
Sbjct: 785 FSGL-VALRKICNHPDLFSGGPKNFKGIPGEELEEDQFGYWKRSGKMIVVESLLKIWHKQ 843
Query: 499 ---VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
VL+FSQ ++LDI+E + + Y ++DG+ + R+ I +N+ ++S +FLL+
Sbjct: 844 GQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRYNE-DASIFVFLLT 902
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TR GGLG+NLT A+ I+YD DWNP D QA +R RIGQ K V VYRL TA ++E +I
Sbjct: 903 TRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIY 962
Query: 616 KRAFSKLKLEHVVIGKGQFHQERTKSN 642
R K L + V+ K + KSN
Sbjct: 963 HRQIFKQFLTNRVL-KDPKQRRFFKSN 988
Score = 38 (18.4 bits), Expect = 7.6e-65, Sum P(2) = 7.6e-65
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 107 CNTRKAKRAVAAMLTRSKXXXXXXXXXXXXXXRVDKEQRELVSLLTGGKLKSYQLKG 163
CN R A++A+A++ + + K++R L + + K+ Q +G
Sbjct: 291 CNKRAARKALASVTSEPSSTRSENKPDKKGTVLLKKDKR-LEKRIRKLQKKALQFQG 346
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 672 (241.6 bits), Expect = 8.0e-65, P = 8.0e-65
Identities = 170/508 (33%), Positives = 254/508 (50%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-------KGNGLH--- 204
KL YQ GV+WL L GIL D+MGLGKTIQ IAFLA L +G+
Sbjct: 501 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYQG 560
Query: 205 -GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP +++ P + + WV E + P I H + + ++ + R I I++T
Sbjct: 561 LGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTN--KKVKLIREIASCHGILIT 618
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY + + + Y+W Y+++DEGH+++NP + K ++++L+G+P+QNNL
Sbjct: 619 SYSY-IRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNL 677
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSL F+ P +L F F + ++ K + L + P+L
Sbjct: 678 KELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDAINPYL 737
Query: 384 LRRMKSDVEQML--PRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
LRRMK+DV+ L P K E +L+ +T+ QR + I+ ++V+ G
Sbjct: 738 LRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDS-------KEVYQILNGDMQV 790
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVE-QIVEQ------CGKXXXXXXXXXXXXX 494
+ L V LRK CNHPDL P + + +Q GK
Sbjct: 791 FSGL-VALRKICNHPDLFSGGPKILKCVPDADLEEADQFGYWKRSGKMIVVESLLKIWHK 849
Query: 495 XNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLL 554
H+VL F+Q ++L I+E + ++ Y R+DG+ + R+ I +N+ S + IFLL
Sbjct: 850 QGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLITRYNEDKSIF-IFLL 908
Query: 555 STRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRI 614
+TR GG+G+NLT AD I+YD DWNP D QA +R RIGQ K V VYRL TA ++E +I
Sbjct: 909 TTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKI 968
Query: 615 LKRAFSKLKLEHVVIGKGQFHQERTKSN 642
R K L + V+ K + KSN
Sbjct: 969 YHRQIFKQFLTNRVL-KDPKQRRFFKSN 995
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 648 (233.2 bits), Expect = 8.1e-65, Sum P(2) = 8.1e-65
Identities = 131/281 (46%), Positives = 194/281 (69%)
Query: 146 ELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLH 204
E S + G L+ YQ++G+ W+ISL++NG+NGILAD+MGLGKT+QTIA L +LK +
Sbjct: 133 ESPSYIKNGTLRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKHYRNIP 192
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVT 263
GP++V+ P STL NW+NE R+VP++ A+ G+K ER IR MP G ++ + VT
Sbjct: 193 GPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRDVMMP---G-EWDVCVT 248
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SYE+ + + + + +NW+YLV+DE HR+KN K KL + + N+LLLTGTPLQNNL
Sbjct: 249 SYEMVIRE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTPLQNNL 307
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSLL+F+LPD+F+S +F SWFD + C L +++ +V +LHA+LRPFL
Sbjct: 308 HELWSLLNFLLPDVFNSASDFDSWFDTN--C--------LGDQK---LVERLHAVLRPFL 354
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
LRR+K++VE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 355 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDID 395
Score = 592 (213.5 bits), Expect = 1.4e-58, Sum P(2) = 1.4e-58
Identities = 126/271 (46%), Positives = 177/271 (65%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LHA+LRPFLLRR+K++VE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 341 KLVERLHAVLRPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDI---- 396
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 397 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDTHLVINSGKMVALDKLL 454
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y +G+E CR+DG+ + R++ I FN NSS
Sbjct: 455 PKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSK 514
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IF+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +
Sbjct: 515 FIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNT 574
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTK 640
VE RI++RA KL+L+ +VI +G+ ++ K
Sbjct: 575 VEERIVERAEMKLRLDSIVIQQGRLIDQQNK 605
Score = 43 (20.2 bits), Expect = 8.1e-65, Sum P(2) = 8.1e-65
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 56 NKLDELLTQTQMYAEFL 72
N+ + LL QT+++A F+
Sbjct: 53 NRFEFLLKQTELFAHFI 69
>GENEDB_PFALCIPARUM|PFF1185w [details] [associations]
symbol:PFF1185w "iswi protein homologue"
species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 401 (146.2 bits), Expect = 9.7e-64, Sum P(3) = 9.7e-64
Identities = 87/208 (41%), Positives = 131/208 (62%)
Query: 143 EQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG 202
E+R LV + +LK +Q GV+WL+ + G ILAD+MGLGKTIQT+ FL++LK N
Sbjct: 328 ERRPLVDNV---QLKPHQEDGVEWLLKSFLTG-GAILADEMGLGKTIQTLCFLSYLKCNK 383
Query: 203 LHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVV 262
+ GP+L++ PLST+ NW+ EI RF P ++ I GSK ER + + G + + V
Sbjct: 384 IDGPHLIVVPLSTVGNWLREIHRFTPHLTCIKICGSKNERTHAKEDRLAEK-G-LYDLYV 441
Query: 263 TSYEVALSDARKYLRHY-NWKYLVVDEGHRLKNPKCKLLKELKYIPIGN-KLLLTGTPLQ 320
T+YE ++ ++ W+ +V+DE HR+KN + + + +GN +LLLTGTPLQ
Sbjct: 442 TTYETVKNEEEFFVETIPKWQCIVLDEAHRIKNQSGAIRHSMDRV-VGNMRLLLTGTPLQ 500
Query: 321 NNLAELWSLLHFILPDIFSSLEEFQSWF 348
NN AEL++L++F+ PDIF + E + F
Sbjct: 501 NNSAELFTLINFMFPDIFKNSEIIEQAF 528
Score = 330 (121.2 bits), Expect = 9.7e-64, Sum P(3) = 9.7e-64
Identities = 67/133 (50%), Positives = 95/133 (71%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
HKVL+F+Q+ +LD +E Y + ++ R+DGS R+ I++FN +S Y I+L+ST
Sbjct: 1094 HKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIYLIST 1153
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGGLGINLTAA+ I+YD DWNP +DLQA+DR HRIGQ + V+V++L T +VE R+
Sbjct: 1154 RAGGLGINLTAANHVIMYDEDWNPFIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAF 1213
Query: 617 RAFSKLKLEHVVI 629
R KLKL+ +V+
Sbjct: 1214 RREQKLKLDKLVV 1226
Score = 58 (25.5 bits), Expect = 9.7e-64, Sum P(3) = 9.7e-64
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 351 SGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRK--KEIIL-YATM 407
+ K N + +L+ + + + + +L +LRR+K LP+K ++ L T+
Sbjct: 575 TSKVNVNIGNIDLKSAIKEEDLKSIRCLLDKIMLRRLKEQAIT-LPKKIFHDVWLPLGTL 633
Query: 408 TEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHP 456
+ H + L++ + + + EKV +K KL L++++R C HP
Sbjct: 634 SAH---WYKRLLD--IRSMVEEKV-----SVK-KLLGLVIKMRIICGHP 671
Score = 50 (22.7 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 20/91 (21%), Positives = 38/91 (41%)
Query: 386 RMKSDVEQMLPRK--KEI---ILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG 440
+++ E + P KE+ I +A M + + +D+ N +K + +
Sbjct: 1637 QLRKAYENVFPNNFVKELVNRIEHAKMLKQKGIVEDNNNNNNNNKETNKK--KSTTFLHT 1694
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
KL + ++ L +NC P + C YPP
Sbjct: 1695 KLPSKLLVLCENCKLPCHANYKYPGKCCYPP 1725
Score = 46 (21.3 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 398 KKEIIL-YATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNH 455
+K II Y ++ HL T++ L+E + R NN+ + N N+
Sbjct: 2340 EKSIIQNYLNKMKNSLKNSSHLDKNTIKEKLKELNYVNSRSNSNTKNNMNTNIINNNNN 2398
>UNIPROTKB|C6KT82 [details] [associations]
symbol:PFF1185w "Smarca-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 401 (146.2 bits), Expect = 9.7e-64, Sum P(3) = 9.7e-64
Identities = 87/208 (41%), Positives = 131/208 (62%)
Query: 143 EQRELVSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNG 202
E+R LV + +LK +Q GV+WL+ + G ILAD+MGLGKTIQT+ FL++LK N
Sbjct: 328 ERRPLVDNV---QLKPHQEDGVEWLLKSFLTG-GAILADEMGLGKTIQTLCFLSYLKCNK 383
Query: 203 LHGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVV 262
+ GP+L++ PLST+ NW+ EI RF P ++ I GSK ER + + G + + V
Sbjct: 384 IDGPHLIVVPLSTVGNWLREIHRFTPHLTCIKICGSKNERTHAKEDRLAEK-G-LYDLYV 441
Query: 263 TSYEVALSDARKYLRHY-NWKYLVVDEGHRLKNPKCKLLKELKYIPIGN-KLLLTGTPLQ 320
T+YE ++ ++ W+ +V+DE HR+KN + + + +GN +LLLTGTPLQ
Sbjct: 442 TTYETVKNEEEFFVETIPKWQCIVLDEAHRIKNQSGAIRHSMDRV-VGNMRLLLTGTPLQ 500
Query: 321 NNLAELWSLLHFILPDIFSSLEEFQSWF 348
NN AEL++L++F+ PDIF + E + F
Sbjct: 501 NNSAELFTLINFMFPDIFKNSEIIEQAF 528
Score = 330 (121.2 bits), Expect = 9.7e-64, Sum P(3) = 9.7e-64
Identities = 67/133 (50%), Positives = 95/133 (71%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLST 556
HKVL+F+Q+ +LD +E Y + ++ R+DGS R+ I++FN +S Y I+L+ST
Sbjct: 1094 HKVLIFTQFQLVLDELEEYCKYRCWKYMRLDGSTNKLIRELDIREFNLSDSIYFIYLIST 1153
Query: 557 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILK 616
RAGGLGINLTAA+ I+YD DWNP +DLQA+DR HRIGQ + V+V++L T +VE R+
Sbjct: 1154 RAGGLGINLTAANHVIMYDEDWNPFIDLQAIDRAHRIGQKREVNVWKLMTEWTVEERMAF 1213
Query: 617 RAFSKLKLEHVVI 629
R KLKL+ +V+
Sbjct: 1214 RREQKLKLDKLVV 1226
Score = 58 (25.5 bits), Expect = 9.7e-64, Sum P(3) = 9.7e-64
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 351 SGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKSDVEQMLPRK--KEIIL-YATM 407
+ K N + +L+ + + + + +L +LRR+K LP+K ++ L T+
Sbjct: 575 TSKVNVNIGNIDLKSAIKEEDLKSIRCLLDKIMLRRLKEQAIT-LPKKIFHDVWLPLGTL 633
Query: 408 TEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHP 456
+ H + L++ + + + EKV +K KL L++++R C HP
Sbjct: 634 SAH---WYKRLLD--IRSMVEEKV-----SVK-KLLGLVIKMRIICGHP 671
Score = 50 (22.7 bits), Expect = 2.7e-33, Sum P(2) = 2.7e-33
Identities = 20/91 (21%), Positives = 38/91 (41%)
Query: 386 RMKSDVEQMLPRK--KEI---ILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG 440
+++ E + P KE+ I +A M + + +D+ N +K + +
Sbjct: 1637 QLRKAYENVFPNNFVKELVNRIEHAKMLKQKGIVEDNNNNNNNNKETNKK--KSTTFLHT 1694
Query: 441 KLNNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
KL + ++ L +NC P + C YPP
Sbjct: 1695 KLPSKLLVLCENCKLPCHANYKYPGKCCYPP 1725
Score = 46 (21.3 bits), Expect = 7.1e-33, Sum P(2) = 7.1e-33
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 398 KKEIIL-YATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNH 455
+K II Y ++ HL T++ L+E + R NN+ + N N+
Sbjct: 2340 EKSIIQNYLNKMKNSLKNSSHLDKNTIKEKLKELNYVNSRSNSNTKNNMNTNIINNNNN 2398
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 131/278 (47%), Positives = 194/278 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 294
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 295 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 353
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 354 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 401
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 130/270 (48%), Positives = 179/270 (66%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LHA+L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID----- 439
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y E IV GK
Sbjct: 440 VLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLL 498
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y +GYE CR+DG +ER+ I+ FN NSS
Sbjct: 499 AKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSR 558
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +
Sbjct: 559 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 618
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
VE RI++RA KL+L+ +VI +G+ +++
Sbjct: 619 VEERIVERAEIKLRLDSIVIQQGRLIDQQS 648
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 660 (237.4 bits), Expect = 1.5e-63, P = 1.5e-63
Identities = 169/507 (33%), Positives = 254/507 (50%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-------KGNGLH--- 204
KL YQ GV+WL L GIL D+MGLGKTIQ IAFLA L +G+
Sbjct: 506 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 565
Query: 205 -GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
GP +++ P + + WV E + P I H + +++ + R + I++T
Sbjct: 566 LGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTH--KKEKLIRDVAHCHGILIT 623
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY + + + Y+W Y+++DEGH+++NP + K ++++L+G+P+QNNL
Sbjct: 624 SYSY-IRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNL 682
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
ELWSL FI P +L F F + ++ K + L + P+L
Sbjct: 683 RELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYL 742
Query: 384 LRRMKSDVEQML--PRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGK 441
LRRMKSDV+ L P K E +L+ +T+ Q + ++ ++V+ G
Sbjct: 743 LRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDS-------KEVYRILNGEMQI 795
Query: 442 LNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCG--KXXXXXXXXXXXXXXNHK- 498
+ L + LRK CNHPDL + P E +Q G K HK
Sbjct: 796 FSGL-IALRKICNHPDLFSGGPKNLKGLPDDELEEDQFGYWKRSGKMIVVESLLKIWHKQ 854
Query: 499 ---VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLS 555
VL+FSQ ++LDI+E + + Y ++DG+ + R+ I +N+ S + +FLL+
Sbjct: 855 GQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIF-VFLLT 913
Query: 556 TRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRIL 615
TR GGLG+NLT A+ ++YD DWNP D QA +R RIGQ K V VYRL TA ++E +I
Sbjct: 914 TRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIY 973
Query: 616 KRAFSKLKLEHVVIGKGQFHQERTKSN 642
R K L + V+ K + KSN
Sbjct: 974 HRQIFKQFLTNRVL-KDPKQRRFFKSN 999
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 660 (237.4 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 168/502 (33%), Positives = 265/502 (52%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S L G+LK +Q+KGV ++ W N +LAD+MGLGKT+QT+AF++ L+ GP+
Sbjct: 439 SFLHNGQLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFISWLRHVRRQQGPF 498
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEV 267
+V+ PLST+ +W + P ++ ++Y+G++ R+ ++ + P+ P + V
Sbjct: 499 VVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDGNPRRP----KFNV 554
Query: 268 ALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELW 327
L+ ++Y++VD L + + + ++L + L L E
Sbjct: 555 LLT---------TYEYVLVDSSF-LSQFNWQFMA----VDEAHRLKNRDSQLYIKLQEFN 600
Query: 328 SLLHFILPD--IFSSLEEFQSWFDL--SGKCNSEVMKEELEEKRRGQMVAKLHAILRPFL 383
S ++ I ++L E + D G N + +L + + +A+L + PF+
Sbjct: 601 SPARLLITGTPIQNNLAELSALLDFLNPGLVNVDA-DMDLNSEAASEKLAELTKAISPFM 659
Query: 384 LRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKLN 443
LRR K+ VE LP K E I+ +++ Q + +++ K L E +G K L
Sbjct: 660 LRRTKTKVESDLPPKTEKIIRVELSDVQLEYYKNILTKNYAA-LNEGT----KGQKQSLL 714
Query: 444 NLMVQLRKNCNHPDLLESA----FSDSCFYPPV-EQIVEQCGKXXXXXXXXXXXXXXNHK 498
N+M++L+K NHP + SA S V ++ GK H+
Sbjct: 715 NIMMELKKASNHPFMFPSAETKILEGSTRREDVLRALITSSGKMMLLDQLLAKLKRDGHR 774
Query: 499 VLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFLLSTRA 558
VL+FSQ K+LDI+ Y +GY R+DG++ R+ I+ +N +SS F+LSTRA
Sbjct: 775 VLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAIEHYNAPDSSDFAFILSTRA 834
Query: 559 GGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRA 618
GGLGINL ADT IL+DSDWNPQ DLQAM R HRIGQTKPV VYRL + +VE +++RA
Sbjct: 835 GGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPVSVYRLVSKDTVEEEVIERA 894
Query: 619 FSKLKLEHVVIGKGQFHQERTK 640
+KL LE + I +G +E ++
Sbjct: 895 RNKLLLEFITIQRGVTDKEASE 916
>UNIPROTKB|D3ZZZ1 [details] [associations]
symbol:Ercc6 "Protein Ercc6" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1311509
GO:GO:0005524 GO:GO:0008630 GO:GO:0005730 GO:GO:0006284
GO:GO:0003677 GO:GO:0009636 GO:GO:0003682 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257
GO:GO:0006283 GO:GO:0008094 GO:GO:0008023 GO:GO:0032786
GO:GO:0006290 GO:GO:0007256 GO:GO:0000303 IPI:IPI00358023
Ensembl:ENSRNOT00000038493 ArrayExpress:D3ZZZ1 Uniprot:D3ZZZ1
Length = 1475
Score = 658 (236.7 bits), Expect = 2.4e-63, P = 2.4e-63
Identities = 176/510 (34%), Positives = 254/510 (49%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL-------KGNGLH--- 204
KL YQ GV+WL L GIL D+MGLGKTIQ IAFLA L +G+
Sbjct: 500 KLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEG 559
Query: 205 -GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYH--GSKKERDEIRRKHMPRAIGPKFPIV 261
GP L++ P + + WV E + P I H GS R E + R I ++
Sbjct: 560 LGPTLIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSCAHRKE----RLVRDIVHCHGVL 615
Query: 262 VTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQN 321
+TSY RH +W Y+++DEGH+++NP + K ++++L+G+P+QN
Sbjct: 616 ITSYSYIRLMQDDISRH-DWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQN 674
Query: 322 NLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRP 381
NL ELWSL F P +L F F + ++ K + L + P
Sbjct: 675 NLRELWSLFDFTFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINP 734
Query: 382 FLLRRMKSDVEQML--PRKKEIILYATMTEHQRNFQDHLINKTLENHLREK-VFSAGRGM 438
+LLRRMKSDV+ L P K E +L+ +T+ Q H K +N + K V+ G
Sbjct: 735 YLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQ-----H---KVYQNFIDSKAVYRILNG- 785
Query: 439 KGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPP----VEQIV--EQCGKXXXXXXXXXXX 492
+ ++ + +V LRK CNHPDL ++ P EQ ++ GK
Sbjct: 786 ENQIFSGLVALRKICNHPDLFSGGPKNTSALPEDGLEEEQFGYWKRSGKMIVVESLLKIW 845
Query: 493 XXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIF 552
+VL+FSQ ++L I+E + Y ++DG+ + R+ I +N+ S + +F
Sbjct: 846 HKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIF-VF 904
Query: 553 LLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEG 612
LL+TR GGLG+NLT A+ I+YD DWNP D QA +R RIGQ K V VYRL TA ++E
Sbjct: 905 LLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE 964
Query: 613 RILKRAFSKLKLEHVVIGKGQFHQERTKSN 642
+I R K L + V+ K + KSN
Sbjct: 965 KIYHRQIFKQFLTNRVL-KDPKQRRFFKSN 993
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 650 (233.9 bits), Expect = 5.2e-63, P = 5.2e-63
Identities = 131/278 (47%), Positives = 194/278 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 179 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 238
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 239 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMP---G-EWDVCVTSYE 294
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 295 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 353
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 354 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 401
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 402 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 439
Score = 611 (220.1 bits), Expect = 9.2e-59, P = 9.2e-59
Identities = 130/270 (48%), Positives = 179/270 (66%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LHA+L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 385 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID----- 439
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y E IV GK
Sbjct: 440 VLNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDEHIVSNSGKMVVLDKLL 498
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y +GYE CR+DG +ER+ I+ FN NSS
Sbjct: 499 AKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIEAFNVPNSSR 558
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +
Sbjct: 559 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 618
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
VE RI++RA KL+L+ +VI +G+ +++
Sbjct: 619 VEERIVERAEIKLRLDSIVIQQGRLIDQQS 648
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 649 (233.5 bits), Expect = 6.2e-63, P = 6.2e-63
Identities = 131/278 (47%), Positives = 194/278 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GG L+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTIA L +LK + GP+
Sbjct: 180 SYVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPH 239
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ I + G K R IR + MP G ++ + VTSYE
Sbjct: 240 MVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMP---G-EWDVCVTSYE 295
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + + + ++W+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 296 MVIKE-KSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHEL 354
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S ++F SWFD C L +++ +V +LHA+L+PFLLRR
Sbjct: 355 WALLNFLLPDVFNSADDFDSWFDTKN-C--------LGDQK---LVERLHAVLKPFLLRR 402
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 403 IKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID 440
Score = 596 (214.9 bits), Expect = 3.7e-57, P = 3.7e-57
Identities = 128/270 (47%), Positives = 177/270 (65%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LHA+L+PFLLRR+K+DVE+ LP KKEI +Y +++ QR + ++ K ++
Sbjct: 386 KLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID----- 440
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ S+G+ K +L N+++QLRK CNHP L + A Y E IV GK
Sbjct: 441 VLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDEHIVGNSGKMVALDKLL 499
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y +GYE R+DG +ER+ I FN NSS
Sbjct: 500 ARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSK 559
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
IF+LSTRAGGLGINL +AD ILYDSDWNPQ+DLQAMDR HRIGQ KPV V+RL T +
Sbjct: 560 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 619
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERT 639
VE RI++RA KL+L+ +VI +G+ +++
Sbjct: 620 VEERIVERAEIKLRLDSIVIQQGRLIDQQS 649
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 624 (224.7 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 602 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 659
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 660 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 716
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 717 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 775
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 776 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 828
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 829 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 882
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 883 INILMQLRKVCNHPNLFDPRPVTSPFITP 911
Score = 39 (18.8 bits), Expect = 2.4e-62, Sum P(2) = 2.4e-62
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQESE 89
+EN+ E+ DL+ + +TQ E E+ T N E++ E
Sbjct: 346 EENIE--EEPSQDLEVHPPSSAVTQCNKQRWHPDEDDEEFTANEDEEDEE 393
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 647 (232.8 bits), Expect = 6.2e-62, P = 6.2e-62
Identities = 176/507 (34%), Positives = 260/507 (51%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGNGLH--GPYL 208
+TGG L YQL+G+ WL W G + ILAD+MGLGKT+QT FL L G H GP+L
Sbjct: 691 VTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEG-HSKGPFL 749
Query: 209 VIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMP---RAI--GPKFPIV-- 261
V APLST+ NW E + P + + Y G K R IR AI G K +
Sbjct: 750 VSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRGGKKASRMKK 809
Query: 262 --VTSYEVALSDAR------KYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLL 313
+ V L+ L +W L+VDE HRLKN + K + L + +KLL
Sbjct: 810 EAAVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLL 869
Query: 314 LTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVA 373
LTGTPLQNNL EL+ LL+F+ P+ F +LE F F +++ KE+ +
Sbjct: 870 LTGTPLQNNLEELFHLLNFLTPERFHNLEGFLEEF-------ADIAKED--------QIK 914
Query: 374 KLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFS 433
KLH +L P +LRR+K+DV + +P K E+I+ ++ Q+ + +++ + E + +
Sbjct: 915 KLHDMLGPHMLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFE-----ALNA 969
Query: 434 AGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYP----PVEQIVEQCGKXXXXXXXX 489
G G + L N+++ L+K CNHP L A ++ P ++ GK
Sbjct: 970 RGGGNQVSLLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKML 1029
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
H+VL+FSQ TK+LD++E + +GY+ RIDG + + R+ I FN +
Sbjct: 1030 KNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQG 1089
Query: 550 RIFLLSTRAGG--LGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATA 607
FLLSTRAGG L L +++ + DS + + + R HR+GQ K V+ R T
Sbjct: 1090 FCFLLSTRAGGPCLWSPLRSSERNV--DSSLSRKTMQKTYSRAHRLGQNKKVNDIRFVT- 1146
Query: 608 QSVEGRILKR--AFSKLKLEHVVIGKG 632
+S+ GR A ++ L H+V+ G
Sbjct: 1147 KSISGRSASSQVAQKEMMLTHLVVRPG 1173
>ASPGD|ASPL0000018137 [details] [associations]
symbol:AN4187 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005576
"extracellular region" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 EMBL:BN001302
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI
InterPro:IPR022707 Pfam:PF12054 EMBL:AACD01000068 OrthoDB:EOG44XNQZ
RefSeq:XP_661791.1 ProteinModelPortal:Q5B5J3 STRING:Q5B5J3
EnsemblFungi:CADANIAT00004481 GeneID:2873610 KEGG:ani:AN4187.2
Uniprot:Q5B5J3
Length = 1904
Score = 432 (157.1 bits), Expect = 8.5e-62, Sum P(2) = 8.5e-62
Identities = 109/318 (34%), Positives = 167/318 (52%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLA---HLKGNGLHG------ 205
+L+ YQ +GV WL L + L+GIL D MGLGKT+QTI +A H++
Sbjct: 1317 ELRPYQQEGVNWLAFLNRYNLHGILCDDMGLGKTLQTICIVASDHHMRAEDFAKTQRPES 1376
Query: 206 ---PYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVV 262
P L+I P S +W E+ ++ P ++ + Y G ER +++ + A IVV
Sbjct: 1377 RKVPSLIICPPSLSGHWQQEVKQYAPFLNCVAYVGPPAERSKLQGS-LADA-----DIVV 1430
Query: 263 TSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNN 322
TSY++ +D LR +W Y V+DEGH +KNPK K+ +K I ++L+L+GTP+QNN
Sbjct: 1431 TSYDICRND-NDVLRPISWNYCVLDEGHLIKNPKAKVTMAVKRINSNHRLILSGTPIQNN 1489
Query: 323 LAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
+ ELWSL F++P + + F F S K E++ + LH + PF
Sbjct: 1490 VLELWSLFDFLMPGFLGTEKVFLDRF-AKPIATSRFSKSSKEQEAGALAIEALHKQVLPF 1548
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLREKVFSAGRGMKGK 441
LLRR+K +V LP K Y +E Q+ F+D K + L+EK+ S+ + K
Sbjct: 1549 LLRRLKEEVLNDLPPKIIQNYYCDPSELQKKLFED--FTKKEQKALQEKMGSSEKADKEH 1606
Query: 442 LNNLMVQLRKNCNHPDLL 459
+ + +R+ CN P L+
Sbjct: 1607 IFQALQYMRRLCNSPALV 1624
Score = 282 (104.3 bits), Expect = 8.5e-62, Sum P(2) = 8.5e-62
Identities = 60/138 (43%), Positives = 85/138 (61%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEK---GYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+ LVF Q ++LDI++ +K + R+DG+V R+ + FN + SY + L
Sbjct: 1686 HRALVFCQMKEMLDIVQSEVLQKLLPSVQFLRLDGAVEATRRQDIVNRFNS-DPSYDVLL 1744
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
L+T GGLG+NLT ADT I + DWNPQ D+QAMDR HRIGQ K V+VYRL T ++E +
Sbjct: 1745 LTTSVGGLGLNLTGADTVIFVEHDWNPQKDIQAMDRAHRIGQKKVVNVYRLITRGTLEEK 1804
Query: 614 ILKRAFSKLKLEHVVIGK 631
IL K+ + V+ +
Sbjct: 1805 ILNLQRFKIDVASTVVNQ 1822
Score = 49 (22.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 239 KKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDARKYLRHY-NWKYLVVDEGHRLKNPKC 297
KK ++ +K +A+ K + + + A +Y+R N LVV EGH+ N
Sbjct: 1578 KKLFEDFTKKEQ-KALQEKMGSSEKADKEHIFQALQYMRRLCNSPALVVKEGHKQYNEVQ 1636
Query: 298 KLLKELK 304
+ L+E K
Sbjct: 1637 QYLQEKK 1643
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 638 (229.6 bits), Expect = 9.3e-62, P = 9.3e-62
Identities = 128/278 (46%), Positives = 192/278 (69%)
Query: 149 SLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKG-NGLHGPY 207
S + GKL+ YQ++G+ WLISL++NG+NGILAD+MGLGKT+QTI+ L ++K + GP+
Sbjct: 156 SYVKTGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 215
Query: 208 LVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDE-IRRKHMPRAIGPKFPIVVTSYE 266
+V+ P STL NW+NE R+VPS+ A+ G ++ER IR +P G ++ + VTSYE
Sbjct: 216 MVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRDTLLP---G-EWDVCVTSYE 271
Query: 267 VALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAEL 326
+ + + R + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPLQNNL EL
Sbjct: 272 MLIIE-RAVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHEL 330
Query: 327 WSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRR 386
W+LL+F+LPD+F+S E+F +WFD + C + ++V +LH +LRPFLLRR
Sbjct: 331 WALLNFLLPDVFNSSEDFDAWFD-TNNCLGDT-----------KLVERLHTVLRPFLLRR 378
Query: 387 MKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
+K+DVE+ L KKEI +Y +++ QR + ++ K ++
Sbjct: 379 IKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDID 416
Score = 559 (201.8 bits), Expect = 3.6e-53, P = 3.6e-53
Identities = 120/264 (45%), Positives = 169/264 (64%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ L KKEI +Y +++ QR + ++ K ++
Sbjct: 362 KLVERLHTVLRPFLLRRIKADVEKSLLPKKEIKIYVGLSKMQREWYTKILMKDIDI---- 417
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A + + +V GK
Sbjct: 418 -LNSAGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNS-GKMVVLDKLL 475
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + Y CR+DG +ER+ I FN+ NSS
Sbjct: 476 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISINAFNEPNSSK 535
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD I+YDSDWNPQ+DLQAMDR HRIGQ K V V+R T +
Sbjct: 536 FLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQVRVFRFITDNT 595
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQ 633
VE RI++RA KL+L+ +VI +G+
Sbjct: 596 VEERIVERAEMKLRLDSIVIQQGR 619
>POMBASE|SPBC1826.01c [details] [associations]
symbol:mot1 "TATA-binding protein associated factor
Mot1 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017025 "TBP-class
protein binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPBC1826.01c GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0006355 GO:GO:0003677 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006366 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0017025 EMBL:AB027981 PIR:T39739
RefSeq:NP_596080.2 ProteinModelPortal:O43065 STRING:O43065
EnsemblFungi:SPBC1826.01c.1 GeneID:2539633 KEGG:spo:SPBC1826.01c
OrthoDB:EOG44XNQZ NextBio:20800788 Uniprot:O43065
Length = 1953
Score = 450 (163.5 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 120/346 (34%), Positives = 180/346 (52%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLA--HLKGNGL---------- 203
L+ YQ +GV WL L + L+GIL D MGLGKT+QTI +A H L
Sbjct: 1358 LRKYQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFA 1417
Query: 204 HGPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
H P L++ P + +W E+S + P + Y G ER +IR K K +VVT
Sbjct: 1418 HVPSLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMK------KSDVVVT 1471
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY++ +D + ++ +W Y V+DEGH +KN + KL K +K + ++L+L+GTP+QNN+
Sbjct: 1472 SYDICRNDVDELVK-IDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNV 1530
Query: 324 AELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK-LHAILRPF 382
ELWSL F++P + + FQ F + S K +E+ RG + + +H + PF
Sbjct: 1531 LELWSLFDFLMPGFLGTEKTFQERF-VRPIAASRDAKSSSKERERGTLALEAIHKQVLPF 1589
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQR----NFQDHL-INKTLENHLREKVFSAGR- 436
+LRR+K DV LP K Y M++ QR +F L IN+ LE+ EK +
Sbjct: 1590 MLRRLKEDVLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKK 1649
Query: 437 -GMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGK 481
K + + +RK CNHP L+ ++ +P IV+Q K
Sbjct: 1650 KSQKAHIFQALQYMRKLCNHPALI---LTEK--HPKRNAIVKQLAK 1690
Score = 264 (98.0 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 59/138 (42%), Positives = 84/138 (60%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEKGY-EVC--RIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+VL+F Q +LD++E + +V R+DGSV +R+ + FN+ + S + L
Sbjct: 1737 HRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNN-DPSIDVLL 1795
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
L+T GGLG+NLT ADT I + DWNP DLQAMDR HRIGQ K V+VYRL T +E +
Sbjct: 1796 LTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEK 1855
Query: 614 ILKRAFSKLKLEHVVIGK 631
I+ K+ + V+ +
Sbjct: 1856 IMGLQRFKMNVASTVVNQ 1873
Score = 37 (18.1 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 62 LTQTQMYAEFLLEKMEDITVNGVE 85
LT + LLE+ EDI+ + E
Sbjct: 653 LTLRLCFQNVLLEQQEDISKSSCE 676
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 612 (220.5 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 132/322 (40%), Positives = 192/322 (59%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLVIAPLS 214
LK YQLKG+ WL +L++ G+NGILAD+MGLGKT+Q+I+ LA+L + GP+LV+ P S
Sbjct: 672 LKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNMWGPFLVVTPAS 731
Query: 215 TLSNWVNEISRFVPSVSAIIYHGSKKERDEIR----RKHMPRAIGPKFPIVVTSYEVALS 270
TL NW EI++FVP + Y G+ K+R +R RK + F ++VTSY++ ++
Sbjct: 732 TLHNWQQEITKFVPEFKVLPYWGNAKDRKILRKFWDRKSLRYDKDSPFHVLVTSYQLIVA 791
Query: 271 DARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLL 330
D Y + W+Y+++DE +K+ K L + N+LLLTGTP+QN++ ELW+LL
Sbjct: 792 DIA-YFQKMKWQYMILDEAQAIKSSSSSRWKSLLNLTCRNRLLLTGTPIQNSMQELWALL 850
Query: 331 HFILPDIFSSLEEFQSWF--DLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMK 388
HFI+P IF S +EF WF D+ S +E Q + +LH IL+PF+LRR+K
Sbjct: 851 HFIMPSIFDSHDEFSDWFAKDIESHAQSNTSLDE-------QQLRRLHMILKPFMLRRIK 903
Query: 389 SDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTL--ENHLREKVFSAGRGMKGKLNNLM 446
+V+ L K EI +Y +T Q+ L ++ + L E + S L NL+
Sbjct: 904 KNVQSELGDKVEIDVYCDLTTRQKKLYQQLRSQISMSDTDLLE-LESNSTSSDSSLANLV 962
Query: 447 VQLRKNCNHPDLLESAFSDSCF 468
+Q RK CNHPDL E A +S F
Sbjct: 963 MQFRKVCNHPDLFERADVNSPF 984
Score = 379 (138.5 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 80/219 (36%), Positives = 123/219 (56%)
Query: 413 NFQDHLINKTLENHLREKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCF-YPP 471
NF + + N ++++R + + KL + L + L F S P
Sbjct: 1168 NFTNKMNNTLFDSNIRSSLIPLSLSTELKLMKDQIPLEQYPKSNMLPMPIFDYSNIRMPS 1227
Query: 472 VEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVR 531
+++ + + GK H++L++ Q T+++ I E Y K Y+ R+DGS
Sbjct: 1228 MDRFIAESGKLAKLDELLIDLKRGGHRILIYFQMTRMMQIFEEYLAYKSYKYIRLDGSTT 1287
Query: 532 LDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCH 591
++ R+ +Q + N IF+LSTRAGGLG+NLT+ADT I YDSDWNP +D QAMDR H
Sbjct: 1288 IESRREMVQAWQ-TNPEIFIFMLSTRAGGLGLNLTSADTVIFYDSDWNPTIDSQAMDRAH 1346
Query: 592 RIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIG 630
RIGQTK V V+RL T ++E +IL+RA K +++ +V+G
Sbjct: 1347 RIGQTKQVKVFRLVTRNTIEQKILERAKEKEEIQKLVVG 1385
Score = 58 (25.5 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/34 (32%), Positives = 22/34 (64%)
Query: 54 QFNKLDELLTQTQMYAEFLLEKMEDITVNGVEQE 87
Q KL+ L+TQT++Y+ F+ +K++ + G +
Sbjct: 539 QSRKLNFLITQTELYSHFIGKKIKTDELEGTNAD 572
Score = 41 (19.5 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 16/51 (31%), Positives = 23/51 (45%)
Query: 293 KNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSSLEE 343
K + L E YIP KLL+T N + + + L F D+ S E+
Sbjct: 1089 KLERINYLYEGDYIPKNKKLLITDHSTSTNSSFISNSLVF--SDLVSIKEK 1137
Score = 39 (18.8 bits), Expect = 1.6e-59, Sum P(2) = 1.6e-59
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 144 QRELVSLLTGGKLKSYQLKG 163
Q EL S G K+K+ +L+G
Sbjct: 549 QTELYSHFIGKKIKTDELEG 568
Score = 37 (18.1 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 392 EQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
+Q ++ E + +AT+ + + +N ENHL E
Sbjct: 24 DQQQQQQAESVDHATINGNGQTSVS-AVNNVQENHLSE 60
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 624 (224.7 bits), Expect = 1.5e-60, P = 1.5e-60
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 600 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 657
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 658 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 714
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 715 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 773
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 774 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 826
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 827 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 880
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 881 INILMQLRKVCNHPNLFDPRPVTSPFITP 909
>CGD|CAL0002614 [details] [associations]
symbol:orf19.4502 species:5476 "Candida albicans" [GO:0000228
"nuclear chromosome" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0017025 "TBP-class protein binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045898 "regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0042790 "transcription of nuclear large rRNA transcript from
RNA polymerase I promoter" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0002614 GO:GO:0005524 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K15192 InterPro:IPR022707 Pfam:PF12054 EMBL:AACQ01000142
EMBL:AACQ01000141 RefSeq:XP_712896.1 RefSeq:XP_712928.1
ProteinModelPortal:Q59TC9 STRING:Q59TC9 GeneID:3645462
GeneID:3645500 KEGG:cal:CaO19.11978 KEGG:cal:CaO19.4502
Uniprot:Q59TC9
Length = 1915
Score = 432 (157.1 bits), Expect = 4.2e-60, Sum P(2) = 4.2e-60
Identities = 111/322 (34%), Positives = 177/322 (54%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLA---HLK-------GNGLHG 205
L+ YQ +GV WL L + L+GIL D MGLGKT+QTI ++ H++ G+ +
Sbjct: 1302 LRKYQQEGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIVSSDHHIREENFKETGSAEYR 1361
Query: 206 --PYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
P LVI P S + +W EI+++ P + ++Y GS R +R + +P A +VVT
Sbjct: 1362 KLPSLVICPPSLIGHWEQEINQYAPFMKVLVYAGSPSIRIPLRGQ-IPDA-----DVVVT 1415
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY+V +D +H ++ Y V+DEGH +KN KL K +K + ++L+L+GTP+QNN+
Sbjct: 1416 SYDVCRNDVESLTKH-DYNYCVLDEGHIIKNASSKLSKSVKRVKAEHRLILSGTPIQNNV 1474
Query: 324 AELWSLLHFILPDIFSSLEEFQSWF--DLSGKCNSEVMKEELEEKRRGQMVAK-LHAILR 380
ELWSL F++P + + F F ++ NS+ +E E G + + LH +
Sbjct: 1475 LELWSLFDFLMPGFLGTEKVFHEKFAKPIAASRNSKTSSKEQEA---GALAMESLHKQVL 1531
Query: 381 PFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLREKVFSAGRGMK 439
PF+LRR+K DV LP K Y +++ Q+ ++D KT + ++ V + + K
Sbjct: 1532 PFMLRRLKEDVLSDLPPKIIQDYYCELSDLQKKLYKDFA--KTQKETIKTDVQGSEKEGK 1589
Query: 440 GKLNNLMVQLRKNCNHPDLLES 461
+ + +RK CNHP L+ S
Sbjct: 1590 THVFQALQYMRKLCNHPALVMS 1611
Score = 266 (98.7 bits), Expect = 4.2e-60, Sum P(2) = 4.2e-60
Identities = 56/138 (40%), Positives = 83/138 (60%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEK---GYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+ L+F Q +LDI+E K R+DGS +R+ ++ FN+ + S + L
Sbjct: 1687 HRALIFCQLKDMLDIVENELLRKYLPSVTFMRLDGSTDPRDRQSIVRKFNE-DPSIDVLL 1745
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
L+T+ GGLG+NLT ADT I + DWNP DLQAMDR HR+GQ K V+VYRL T ++E +
Sbjct: 1746 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRLGQKKVVNVYRLITKDTLEEK 1805
Query: 614 ILKRAFSKLKLEHVVIGK 631
I+ K+ + ++ +
Sbjct: 1806 IMGLQKFKMNIASTIVNQ 1823
Score = 39 (18.8 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 438 MKGKLNNLMVQLRKNCNHPDLLESAFSDS 466
+ + ++M L K C+H +++E D+
Sbjct: 541 LSASIGSVMDLLAKLCSHKEVIEIMQQDA 569
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 460 (167.0 bits), Expect = 5.2e-60, Sum P(2) = 5.2e-60
Identities = 106/280 (37%), Positives = 162/280 (57%)
Query: 151 LTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHLKGN-GLHGPYLV 209
L G L+ YQ GV+WL SL + LNGILAD+ GLGKT+QT+A+ AHL N G+ GP+LV
Sbjct: 1056 LLHGSLREYQQVGVEWLASLHRKNLNGILADETGLGKTVQTVAYFAHLACNQGIWGPHLV 1115
Query: 210 IAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVAL 269
+ L NW E R+ P + ++Y GS+++R R K F + VTSY++ L
Sbjct: 1116 VVRTCKLLNWEMEFKRWCPGLKILLYLGSRRQR---RYKRSRWCEPNNFHVCVTSYKLLL 1172
Query: 270 SDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
D +LR WK+LV+DE +KN K + + I ++LL TPLQN L ELW++
Sbjct: 1173 KDQSHFLRR-RWKHLVLDEVQLIKNMTEKHWETIFNIKSQQRILLINTPLQNTLKELWTM 1231
Query: 330 LHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILRPFLLRRMKS 389
+HF+LP I F K ++ ++ + +V +LH +++PF+LRR K
Sbjct: 1232 IHFLLPGITHPYLNFPI------KPGTDQNQDYCHK-----LVIRLHRMIQPFILRRSKR 1280
Query: 390 DVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLR 428
DVE+ +P+K E IL +++ Q++ ++D LI + + L+
Sbjct: 1281 DVEKQMPKKYEHILKCRLSKRQKSMYEDILIQPSAQEALK 1320
Score = 235 (87.8 bits), Expect = 5.2e-60, Sum P(2) = 5.2e-60
Identities = 45/155 (29%), Positives = 83/155 (53%)
Query: 469 YPPVEQI-VEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRID 527
+P + ++ GK N +VL+F+Q +LDI+E + + + R+D
Sbjct: 1857 FPDAHMLEMDSAGKLEALSILLQKLSAENRRVLIFTQMASMLDILESFLDHRHLTYVRLD 1916
Query: 528 GSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 587
S+ L+ER+ Q++ +N + L + +G ++ ADT + YD+D NP MD++
Sbjct: 1917 ESLSLEERQEQVKKYNRNRQIFCTILTNRCCSAMG-HVFDADTIVFYDTDLNPSMDMRTQ 1975
Query: 588 DRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKL 622
+ C +IG++K +H+YRL + S+E ++LK L
Sbjct: 1976 EWCDKIGRSKDIHIYRLESGNSIEEKLLKNGTKDL 2010
Score = 153 (58.9 bits), Expect = 1.6e-25, Sum P(2) = 1.6e-25
Identities = 32/92 (34%), Positives = 60/92 (65%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRN-FQDHLINKTLENHLR 428
++V +LH +++PF+LRR K DVE+ +P+K E IL +++ Q++ ++D LI + + L+
Sbjct: 1261 KLVIRLHRMIQPFILRRSKRDVEKQMPKKYEHILKCRLSKRQKSMYEDILIQPSAQEALK 1320
Query: 429 EKVFSAGRGMKGKLNNLMVQLRKNCNHPDLLE 460
F ++ +++QL+K CNHPDL++
Sbjct: 1321 TGHFV-------RVLEVLMQLQKICNHPDLIQ 1345
>UNIPROTKB|J9PA15 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
EMBL:AAEX03004382 EMBL:AAEX03004383 EMBL:AAEX03004384
EMBL:AAEX03004387 EMBL:AAEX03004388 Ensembl:ENSCAFT00000048702
Uniprot:J9PA15
Length = 1555
Score = 624 (224.7 bits), Expect = 1.2e-59, P = 1.2e-59
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 616 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 673
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 674 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 730
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 731 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 789
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 790 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 842
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 843 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 896
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 897 INILMQLRKVCNHPNLFDPRPVTSPFITP 925
>UNIPROTKB|F6XHF3 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AAEX03004381 EMBL:AAEX03004385 EMBL:AAEX03004386
Ensembl:ENSCAFT00000026363 EMBL:AAEX03004382 EMBL:AAEX03004383
EMBL:AAEX03004384 EMBL:AAEX03004387 EMBL:AAEX03004388
Uniprot:F6XHF3
Length = 1823
Score = 624 (224.7 bits), Expect = 1.6e-59, P = 1.6e-59
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 616 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 673
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 674 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 730
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 731 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 789
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 790 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 842
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 843 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 896
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 897 INILMQLRKVCNHPNLFDPRPVTSPFITP 925
>UNIPROTKB|E2R6G6 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
Pfam:PF00176 GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 Ensembl:ENSCAFT00000026363
Uniprot:E2R6G6
Length = 1825
Score = 624 (224.7 bits), Expect = 1.6e-59, P = 1.6e-59
Identities = 136/329 (41%), Positives = 205/329 (62%)
Query: 148 VSLLTGGKLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLAHL---KGNGLH 204
+ LL G+L+ YQ G+ WL+++++ LNGILAD+MGLGKTIQTI+ LAHL KGN
Sbjct: 616 IPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNW-- 673
Query: 205 GPYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTS 264
GP+L+I P S + NW E+ R+ PS + Y+G++KER +++R+ + F + +TS
Sbjct: 674 GPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKER-KLKRQGWTKPNA--FHVCITS 730
Query: 265 YEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLA 324
Y++ L D + + R NW+YL++DE +KN K + + L +LLLTGTPLQN+L
Sbjct: 731 YKLVLQDHQAF-RRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 789
Query: 325 ELWSLLHFILPDIFSSLEEFQSWFD--LSGKCNSEVMKEELEEKRRGQMVAKLHAILRPF 382
ELWSL+HF++P +F S EF+ WF L+G M E +E G +V +LH +LRPF
Sbjct: 790 ELWSLMHFLMPHVFQSHREFKEWFSNPLTG------MIEGSQEYNEG-LVKRLHKVLRPF 842
Query: 383 LLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKGKL 442
LLRR+K DVE+ +P+K E ++ +++ QR D + +T ++ + G M +
Sbjct: 843 LLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTT----KETLATGHFMS--V 896
Query: 443 NNLMVQLRKNCNHPDLLESAFSDSCFYPP 471
N+++QLRK CNHP+L + S F P
Sbjct: 897 INILMQLRKVCNHPNLFDPRPVTSPFITP 925
>SGD|S000006003 [details] [associations]
symbol:MOT1 "Essential protein involved in regulation of
transcription" species:4932 "Saccharomyces cerevisiae" [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0000228 "nuclear chromosome" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045898 "regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0042790 "transcription of nuclear large rRNA
transcript from RNA polymerase I promoter" evidence=IMP;IDA]
[GO:0006364 "rRNA processing" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR016024 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000006003 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0003677 GO:GO:0016887 EMBL:BK006949
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:U41849 GO:GO:0000228 GO:GO:0006364
HOGENOM:HOG000210415 KO:K15192 OMA:TKQEGAI InterPro:IPR022707
Pfam:PF12054 GO:GO:0042790 GO:GO:0045898 OrthoDB:EOG44XNQZ
EMBL:M83224 PIR:S22775 RefSeq:NP_015243.1 ProteinModelPortal:P32333
SMR:P32333 DIP:DIP-2418N IntAct:P32333 MINT:MINT-623118
STRING:P32333 PaxDb:P32333 PeptideAtlas:P32333 PRIDE:P32333
EnsemblFungi:YPL082C GeneID:856023 KEGG:sce:YPL082C CYGD:YPL082c
GeneTree:ENSGT00630000089754 NextBio:980935 Genevestigator:P32333
GermOnline:YPL082C Uniprot:P32333
Length = 1867
Score = 409 (149.0 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 113/323 (34%), Positives = 165/323 (51%)
Query: 156 LKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLA---HL------KGNGLHG- 205
L+ YQ GV WL L + L+GIL D MGLGKT+QTI +A +L K +
Sbjct: 1272 LRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESR 1331
Query: 206 --PYLVIAPLSTLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVT 263
P L+I P S +W NE ++ P + ++Y G R +R P+ I+VT
Sbjct: 1332 ALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLR----PQLSDAD--IIVT 1385
Query: 264 SYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNL 323
SY+VA +D L + Y V+DEGH +KN + KL K +K I ++L+LTGTP+QNN+
Sbjct: 1386 SYDVARNDLA-VLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNV 1444
Query: 324 AELWSLLHFILPDIFSSLEEFQSWF--DLSGKCNSEVMKEELEEKRRGQMVAK-LHAILR 380
ELWSL F++P + + FQ F ++ NS+ +E E G + + LH +
Sbjct: 1445 LELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEA---GVLALEALHKQVL 1501
Query: 381 PFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGMKG 440
PF+LRR+K DV LP K Y + + Q+ K + ++ EK G
Sbjct: 1502 PFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKK--QKNVVEKDIENSEIADG 1559
Query: 441 KLN--NLMVQLRKNCNHPDLLES 461
K + + +RK CNHP L+ S
Sbjct: 1560 KQHIFQALQYMRKLCNHPALVLS 1582
Score = 265 (98.3 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 56/138 (40%), Positives = 85/138 (61%)
Query: 497 HKVLVFSQWTKILDIMEYYFNEK---GYEVCRIDGSVRLDERKRQIQDFNDVNSSYRIFL 553
H+ L+F Q +LD++E +K R+DGS+ +R++ ++ FN+ + S L
Sbjct: 1647 HRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNE-DPSIDCLL 1705
Query: 554 LSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGR 613
L+T+ GGLG+NLT ADT I + DWNP DLQAMDR HRIGQ K V+VYR+ T ++E +
Sbjct: 1706 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEK 1765
Query: 614 ILKRAFSKLKLEHVVIGK 631
I+ K+ + V+ +
Sbjct: 1766 IMGLQKFKMNIASTVVNQ 1783
Score = 49 (22.3 bits), Expect = 1.0e-17, Sum P(4) = 1.0e-17
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 355 NSEVMKEELEEKRRGQMVAK--LHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQ 411
N M EE + KR+G ++ L +L P +L Q LP+ + I L+ ++++H+
Sbjct: 1023 NLAKMSEEAQLKRKGGLITLKILFEVLGPSIL--------QKLPQLRSI-LFDSLSDHE 1072
Score = 46 (21.3 bits), Expect = 2.6e-57, Sum P(3) = 2.6e-57
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 40 QENVSKNEDHLNDLQFNKLDELLTQTQMYAEFLLEKMEDITVNG 83
Q N+ + + HL+ L KL+E+L ++ L M D V G
Sbjct: 118 QLNLLQEDHHLSSLSDWKLNEILKSGKV---LLASSMNDYNVLG 158
Score = 46 (21.3 bits), Expect = 2.1e-17, Sum P(4) = 2.1e-17
Identities = 18/62 (29%), Positives = 33/62 (53%)
Query: 307 PIGNKLL-LTGTPLQNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGK-CNSEVMKEELE 364
PI ++ + L + ++ + +WSLL + DI SS+ S DL K C+ + + + L+
Sbjct: 475 PITSEFVKLNNSTIEILVTTIWSLLARLDDDISSSVG---SIMDLLAKLCDHQEVLDILK 531
Query: 365 EK 366
K
Sbjct: 532 NK 533
Score = 42 (19.8 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
Identities = 34/146 (23%), Positives = 60/146 (41%)
Query: 287 DEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSLLHFILPDIFSS----LE 342
+EG L N + KL E+K I + L L SL + L +I S L
Sbjct: 90 NEGSPLDNAQVKLEHEMK-IKLEEATQNNQLNLLQEDHHLSSLSDWKLNEILKSGKVLLA 148
Query: 343 EFQSWFDLSGKCNSEVMKEELEE--KRRGQMV-AKLHAILRPFLLRRMKSDVEQMLPRKK 399
+ +++ GK + + K+ + K+ M+ A A + + + M RKK
Sbjct: 149 SSMNDYNVLGKADDNIRKQAKTDDIKQETSMLNASDKANENKSNANKKSARMLAMARRKK 208
Query: 400 EIILYATMTEHQRNFQDHLINKTLEN 425
++ T +H + + ++KTL N
Sbjct: 209 KMSAKNT-PKHPVDITESSVSKTLLN 233
Score = 37 (18.1 bits), Expect = 1.0e-17, Sum P(4) = 1.0e-17
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 246 RRKHMPRAIGPKFPIVVTSYEVA 268
R+K M PK P+ +T V+
Sbjct: 206 RKKKMSAKNTPKHPVDITESSVS 228
>ZFIN|ZDB-GENE-060531-56 [details] [associations]
symbol:ercc6l "excision repair cross-complementing
rodent repair deficiency, complementation group 6-like"
species:7955 "Danio rerio" [GO:0016539 "intein-mediated protein
splicing" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR006141 InterPro:IPR011990
InterPro:IPR019734 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50005
PROSITE:PS50293 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-060531-56 GO:GO:0005524 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 Gene3D:1.25.40.10 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0000777
GO:GO:0016539 CTD:54821 GeneTree:ENSGT00590000083118
OrthoDB:EOG4FR0RD EMBL:CR391924 EMBL:BX510925 EMBL:BC150168
IPI:IPI00635423 RefSeq:NP_001093563.1 UniGene:Dr.38615
ProteinModelPortal:A2BGR3 Ensembl:ENSDART00000015401
GeneID:100005291 KEGG:dre:100005291 InParanoid:A2BGR3
NextBio:20786618 Bgee:A2BGR3 Uniprot:A2BGR3
Length = 1451
Score = 370 (135.3 bits), Expect = 5.9e-57, Sum P(3) = 5.9e-57
Identities = 84/246 (34%), Positives = 142/246 (57%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNG-ILADQMGLGKTIQTIAFLAHLKGNGLHGPYLVIAPL 213
KL +Q +GV +L SL+++G G ILAD MGLGKTIQ I+FL+ + L L++ P
Sbjct: 104 KLYDHQKEGVAFLYSLYRDGRKGGILADDMGLGKTIQVISFLSGMYDAELANHTLLVMPT 163
Query: 214 STLSNWVNEISRFVPSVSAIIYHGSKKERDEIRRKHMPRAIGPKFPIVVTSYEVALSDAR 273
S + NWV E +++ P + +HGS K R +++ R I K +++T+Y++ +++
Sbjct: 164 SLIKNWVREFAKWTPGMRVKEFHGSSKTE---RNRNLER-IQRKGGVIITTYQMLINNYE 219
Query: 274 KY----LRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQNNLAELWSL 329
+ R + W Y+++DE H++K K K IP N++LLTGTP+QNNL E+W+L
Sbjct: 220 QLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLREMWAL 279
Query: 330 LHFILP-DIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAK-LHAILRPFLLRRM 387
F + + + F++ ++ + + EK G +++ L I++P+ LRR
Sbjct: 280 FDFACQGSLLGTSKTFKTEYE-NPITRAREKDATPGEKALGLRISQNLTDIIKPYFLRRT 338
Query: 388 KSDVEQ 393
K+DV+Q
Sbjct: 339 KADVQQ 344
Score = 296 (109.3 bits), Expect = 5.9e-57, Sum P(3) = 5.9e-57
Identities = 66/168 (39%), Positives = 96/168 (57%)
Query: 455 HPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXXXXXXXXNHKVLVFSQWTKILDIMEY 514
H D ESA S ++E+ GK H+ L+FSQ K+LDIME
Sbjct: 451 HSDESESAVSQIDNISD-HTLIEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMER 509
Query: 515 YFNEKGYEVCRIDGSV-RLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCIL 573
+ + + R+DG+V +L ER+++I F + Y IFLL+T+ GG+GI LT A+ ++
Sbjct: 510 VLRNRNFRLLRLDGTVTQLAEREKRISLFQ-TDKRYTIFLLTTQVGGVGITLTGANRVVI 568
Query: 574 YDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSK 621
+D WNP D QA+DR +RIGQT+ V +YRL T +VE +I +R K
Sbjct: 569 FDPSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQVFK 616
Score = 52 (23.4 bits), Expect = 5.9e-57, Sum P(3) = 5.9e-57
Identities = 18/66 (27%), Positives = 36/66 (54%)
Query: 395 LPRKKEIILYATMTEHQRNFQDHLINKTLE-NHLREKVFSAGRGMKGKLNNLMVQLRKNC 453
L RK ++I++ ++ + Q+ + NK + + ++E + + + L L V L+K C
Sbjct: 375 LTRKNDLIVWTYLS----SVQEDIYNKFISLDQIKELLTTT----RSPLAELTV-LKKLC 425
Query: 454 NHPDLL 459
+HP LL
Sbjct: 426 DHPRLL 431
Score = 46 (21.3 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 380 RPFLLRRMKSDVEQMLPRKKEIILYAT 406
R F L R+ V Q+ R+K I L+ T
Sbjct: 514 RNFRLLRLDGTVTQLAEREKRISLFQT 540
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 585 (211.0 bits), Expect = 7.5e-57, P = 7.5e-57
Identities = 130/313 (41%), Positives = 187/313 (59%)
Query: 370 QMVAKLHAILRPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLRE 429
++V +LH +LRPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 100 KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI---- 155
Query: 430 KVFSAGRGMKGKLNNLMVQLRKNCNHPDLLESAFSDSCFYPPVEQIVEQCGKXXXXXXXX 489
+ SAG+ K +L N+++QLRK CNHP L + A Y +V GK
Sbjct: 156 -LNSAGKMDKMRLLNILMQLRKCCNHPYLFDGA-EPGPPYTTDMHLVTNSGKMVVLDKLL 213
Query: 490 XXXXXXNHKVLVFSQWTKILDIMEYYFNEKGYEVCRIDGSVRLDERKRQIQDFNDVNSSY 549
+VL+FSQ T++LDI+E Y + YE CR+DG DER+ I +N+ NS+
Sbjct: 214 PKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTK 273
Query: 550 RIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQS 609
+F+LSTRAGGLGINL AD ILYDSDWNPQ+DLQAMDR HRIGQTK V V+R T +
Sbjct: 274 FVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNT 333
Query: 610 VEGRILKRAFSKLKLEHVVIGKGQFHQERTKSNCIXXXXXXXXXXXXXXXXXXXXKMIQT 669
VE RI++RA KL+L+ +VI +G+ + N I ++
Sbjct: 334 VEERIVERAEMKLRLDSIVIQQGRLVDQNL--NKIGKDEMLQMIRHGATHVFASK---ES 388
Query: 670 DIGEEDLERVLDR 682
+I +ED++ +L+R
Sbjct: 389 EITDEDIDGILER 401
Score = 391 (142.7 bits), Expect = 2.2e-33, P = 2.2e-33
Identities = 76/165 (46%), Positives = 115/165 (69%)
Query: 260 IVVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPL 319
+ VTSYE+ + + + + +NW+YLV+DE HR+KN K KL + ++ N+LLLTGTPL
Sbjct: 3 VCVTSYEMLIKE-KSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPL 61
Query: 320 QNNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAIL 379
QNNL ELWSLL+F+LPD+F+S ++F SWFD + C L +K+ +V +LH +L
Sbjct: 62 QNNLHELWSLLNFLLPDVFNSADDFDSWFD-TNNC--------LGDKK---LVERLHMVL 109
Query: 380 RPFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLE 424
RPFLLRR+K+DVE+ LP KKE+ +Y +++ QR + ++ K ++
Sbjct: 110 RPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID 154
>UNIPROTKB|B4E0W6 [details] [associations]
symbol:BTAF1 "TATA-binding protein-associated factor 172"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 UniGene:Hs.500526 HGNC:HGNC:17307
EMBL:AL365398 EMBL:AL359198 EMBL:AK303554 IPI:IPI01015564
SMR:B4E0W6 STRING:B4E0W6 Ensembl:ENST00000544642 HOVERGEN:HBG104002
Uniprot:B4E0W6
Length = 677
Score = 384 (140.2 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 107/328 (32%), Positives = 162/328 (49%)
Query: 155 KLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIAFLA----HLKGNGLHG----- 205
+L+ YQ GV WL L + L+GIL D MGLGKT+Q+I LA H
Sbjct: 93 ELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYARSKLAEC 152
Query: 206 ---PYLVIAPLSTLSNWVNEISRFVPS--VSAIIYHGSKKERDEIRRKHMPRAIGPKFPI 260
P LV+ P + +WV+E+ +F ++ + Y G ER IR +H + + +
Sbjct: 153 MPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTER--IRLQHQVK----RHNL 206
Query: 261 VVTSYEVALSDARKYLRHYNWKYLVVDEGHRLKNPKCKLLKELKYIPIGNKLLLTGTPLQ 320
+V SY+V +D + R+ + Y ++DEGH +KN K KL K +K + +++L+GTP+Q
Sbjct: 207 IVASYDVVRNDI-DFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQ 265
Query: 321 NNLAELWSLLHFILPDIFSSLEEFQSWFDLSGKCNSEVMKEELEEKRRGQMVAKLHAILR 380
NN+ ELWSL F++P + +F + + + + E++ + LH +
Sbjct: 266 NNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVL 325
Query: 381 PFLLRRMKSDVEQMLPRKKEIILYATMTEHQRNFQDHLINKTLENHLREKVFSAGRGM-- 438
PFLLRRMK DV Q LP K Y T++ Q + + + E V SA
Sbjct: 326 PFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSATLSEET 385
Query: 439 -KGKLN------NLMVQLRKNCNHPDLL 459
K KL + LRK CNHP L+
Sbjct: 386 EKPKLKATGHVFQALQYLRKLCNHPALV 413
Score = 270 (100.1 bits), Expect = 1.0e-56, Sum P(2) = 1.0e-56
Identities = 59/164 (35%), Positives = 91/164 (55%)
Query: 472 VEQIVEQCGKXXXXXXXXXXXXX-XNHKVLVFSQWTKILDIMEYYFNEK---GYEVCRID 527
++Q++ CG H++L+F Q +LDI+E+ + R+D
Sbjct: 447 LKQLLLDCGLGNGSTSESGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLD 506
Query: 528 GSVRLDERKRQIQDFNDVNSSYRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 587
GS+ +R + FN+ + S + LL+T GGLG+NLT ADT + + DWNP DLQAM
Sbjct: 507 GSIPPGQRHSIVSRFNN-DPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAM 565
Query: 588 DRCHRIGQTKPVHVYRLATAQSVEGRILKRAFSKLKLEHVVIGK 631
DR HRIGQ + V+VYRL T ++E +I+ K+ + + VI +
Sbjct: 566 DRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQ 609
WARNING: HSPs involving 321 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 725 651 0.00095 120 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 571
No. of states in DFA: 623 (66 KB)
Total size of DFA: 365 KB (2181 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.26u 0.08s 51.34t Elapsed: 00:00:02
Total cpu time: 51.38u 0.09s 51.47t Elapsed: 00:00:03
Start: Fri May 10 10:14:03 2013 End: Fri May 10 10:14:06 2013
WARNINGS ISSUED: 2