Query 004887
Match_columns 725
No_of_seqs 663 out of 3367
Neff 6.6
Searched_HMMs 46136
Date Thu Mar 28 14:32:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004887.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/004887hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1595 CCCH-type Zn-finger pr 100.0 1.4E-77 3.1E-82 651.8 18.6 474 80-678 38-524 (528)
2 PHA02874 ankyrin repeat protei 100.0 5.2E-28 1.1E-32 271.5 15.0 244 3-262 26-281 (434)
3 PHA02878 ankyrin repeat protei 99.9 3.9E-27 8.4E-32 267.6 15.2 230 8-247 33-311 (477)
4 PHA03095 ankyrin-like protein; 99.9 6.1E-27 1.3E-31 264.4 15.9 245 2-258 37-312 (471)
5 KOG4412 26S proteasome regulat 99.9 7.7E-28 1.7E-32 230.9 7.2 185 20-242 19-210 (226)
6 PHA02716 CPXV016; CPX019; EVM0 99.9 6.9E-27 1.5E-31 273.6 15.2 251 3-261 167-565 (764)
7 KOG4412 26S proteasome regulat 99.9 3.3E-27 7.2E-32 226.5 9.4 168 6-213 31-209 (226)
8 KOG0510 Ankyrin repeat protein 99.9 1.1E-27 2.4E-32 270.2 6.4 316 2-341 111-492 (929)
9 PHA02791 ankyrin-like protein; 99.9 1.6E-26 3.4E-31 245.4 14.8 192 4-266 22-224 (284)
10 PHA02876 ankyrin repeat protei 99.9 5.4E-27 1.2E-31 277.6 12.4 247 2-261 168-468 (682)
11 PHA02716 CPXV016; CPX019; EVM0 99.9 2.1E-26 4.5E-31 269.7 15.2 239 20-268 158-534 (764)
12 PHA02946 ankyin-like protein; 99.9 1.1E-26 2.4E-31 261.7 12.4 235 2-259 62-320 (446)
13 PHA03095 ankyrin-like protein; 99.9 3.1E-26 6.7E-31 258.6 15.0 200 2-217 73-299 (471)
14 PHA03100 ankyrin repeat protei 99.9 2.1E-26 4.6E-31 260.8 11.1 247 5-263 28-310 (480)
15 PHA02989 ankyrin repeat protei 99.9 7.1E-26 1.5E-30 258.5 14.5 234 2-266 26-286 (494)
16 PHA02875 ankyrin repeat protei 99.9 1.6E-25 3.5E-30 249.3 14.5 126 98-259 100-225 (413)
17 PHA02874 ankyrin repeat protei 99.9 3.1E-25 6.7E-30 249.1 15.0 211 2-253 58-306 (434)
18 PHA02946 ankyin-like protein; 99.9 1.1E-24 2.4E-29 245.6 17.0 210 12-258 37-265 (446)
19 PHA02791 ankyrin-like protein; 99.9 4.7E-24 1E-28 226.5 17.5 163 2-206 53-225 (284)
20 PHA02989 ankyrin repeat protei 99.9 1.9E-24 4.1E-29 246.8 13.4 228 2-259 60-312 (494)
21 PHA02876 ankyrin repeat protei 99.9 5.4E-24 1.2E-28 252.1 17.3 208 2-247 263-487 (682)
22 PHA02798 ankyrin-like protein; 99.9 2.5E-24 5.3E-29 245.6 13.9 227 2-257 61-312 (489)
23 PHA02875 ankyrin repeat protei 99.9 9.6E-24 2.1E-28 235.1 14.3 185 11-261 1-193 (413)
24 PHA03100 ankyrin repeat protei 99.9 2.4E-23 5.2E-28 235.9 16.0 202 2-217 58-292 (480)
25 PHA02878 ankyrin repeat protei 99.9 4.4E-23 9.5E-28 234.5 17.9 199 2-217 60-309 (477)
26 KOG0510 Ankyrin repeat protein 99.9 2E-23 4.4E-28 236.1 14.7 225 2-242 144-416 (929)
27 PHA02798 ankyrin-like protein; 99.9 1.5E-23 3.2E-28 239.2 13.1 230 10-266 34-288 (489)
28 KOG0509 Ankyrin repeat and DHH 99.9 2.3E-23 5E-28 232.1 12.5 188 20-246 60-255 (600)
29 PHA02859 ankyrin repeat protei 99.9 9.7E-23 2.1E-27 207.5 15.7 164 6-209 15-193 (209)
30 PHA02730 ankyrin-like protein; 99.9 9.9E-23 2.2E-27 235.0 14.0 115 151-266 359-492 (672)
31 PHA02917 ankyrin-like protein; 99.9 1.5E-22 3.3E-27 237.4 14.2 193 3-256 23-251 (661)
32 KOG0509 Ankyrin repeat and DHH 99.9 1.8E-22 3.8E-27 225.1 12.1 176 2-215 68-252 (600)
33 KOG4177 Ankyrin [Cell wall/mem 99.9 1.1E-22 2.4E-27 242.6 7.5 200 2-217 397-615 (1143)
34 PHA02795 ankyrin-like protein; 99.9 4.2E-21 9E-26 212.6 16.5 173 2-205 100-292 (437)
35 PHA02859 ankyrin repeat protei 99.8 1.4E-20 3.1E-25 191.5 15.1 147 4-181 43-202 (209)
36 KOG4177 Ankyrin [Cell wall/mem 99.8 4E-21 8.6E-26 229.4 12.2 197 2-214 430-650 (1143)
37 KOG0508 Ankyrin repeat protein 99.8 9.7E-22 2.1E-26 211.2 6.0 141 79-257 96-236 (615)
38 PHA02795 ankyrin-like protein; 99.8 2.8E-20 6E-25 206.1 10.5 176 3-248 73-266 (437)
39 PHA02730 ankyrin-like protein; 99.8 6.6E-20 1.4E-24 211.8 14.0 153 103-258 346-520 (672)
40 PLN03192 Voltage-dependent pot 99.8 1.4E-19 3E-24 218.6 17.0 162 9-211 522-692 (823)
41 PHA02743 Viral ankyrin protein 99.8 1.6E-19 3.6E-24 177.2 13.1 150 25-209 8-162 (166)
42 KOG0514 Ankyrin repeat protein 99.8 1.5E-19 3.1E-24 189.6 10.7 159 5-197 261-429 (452)
43 KOG0502 Integral membrane anky 99.8 7.5E-20 1.6E-24 180.6 7.2 173 8-249 92-272 (296)
44 TIGR00870 trp transient-recept 99.8 1.1E-19 2.4E-24 217.4 10.1 136 98-258 126-279 (743)
45 PHA02917 ankyrin-like protein; 99.8 1.4E-18 3E-23 204.2 16.7 162 2-203 58-258 (661)
46 PHA02792 ankyrin-like protein; 99.8 2.9E-18 6.2E-23 196.5 17.4 197 5-211 168-446 (631)
47 PHA02792 ankyrin-like protein; 99.8 4.6E-19 1E-23 202.9 9.3 246 2-266 61-440 (631)
48 KOG0508 Ankyrin repeat protein 99.8 1.2E-19 2.7E-24 195.1 4.0 165 37-257 40-204 (615)
49 PHA02736 Viral ankyrin protein 99.8 1.4E-18 3E-23 167.8 8.3 99 95-202 50-153 (154)
50 PLN03192 Voltage-dependent pot 99.8 8.7E-18 1.9E-22 203.1 16.3 142 2-180 548-698 (823)
51 PHA02741 hypothetical protein; 99.7 1.5E-17 3.4E-22 163.5 11.8 139 30-201 14-158 (169)
52 KOG0505 Myosin phosphatase, re 99.7 7.3E-18 1.6E-22 185.0 10.3 184 2-197 63-285 (527)
53 KOG0514 Ankyrin repeat protein 99.7 2.7E-18 5.9E-23 180.2 6.4 157 29-252 260-423 (452)
54 KOG0502 Integral membrane anky 99.7 1.1E-17 2.3E-22 165.4 9.6 169 3-211 120-294 (296)
55 PHA02743 Viral ankyrin protein 99.7 3.1E-17 6.8E-22 161.1 12.8 138 3-172 11-162 (166)
56 PHA02741 hypothetical protein; 99.7 7E-18 1.5E-22 166.0 7.8 129 95-256 16-152 (169)
57 PHA02884 ankyrin repeat protei 99.7 2.1E-16 4.6E-21 168.7 9.8 112 95-214 27-143 (300)
58 PHA02736 Viral ankyrin protein 99.7 2.3E-16 5E-21 152.4 8.9 131 5-166 10-154 (154)
59 KOG4369 RTK signaling protein 99.7 5.9E-17 1.3E-21 186.5 5.1 243 3-263 781-1054(2131)
60 PF12796 Ank_2: Ankyrin repeat 99.7 1.1E-15 2.3E-20 133.6 11.8 89 104-205 1-89 (89)
61 TIGR00870 trp transient-recept 99.6 5.6E-16 1.2E-20 185.6 12.7 194 2-211 42-293 (743)
62 KOG0505 Myosin phosphatase, re 99.6 8.9E-16 1.9E-20 168.7 10.2 189 20-244 56-272 (527)
63 KOG0507 CASK-interacting adapt 99.6 3.6E-16 7.7E-21 176.7 6.9 186 5-258 42-243 (854)
64 KOG0195 Integrin-linked kinase 99.6 6.8E-16 1.5E-20 157.7 8.1 117 92-217 26-142 (448)
65 PHA02884 ankyrin repeat protei 99.6 7.6E-15 1.6E-19 156.8 13.8 99 83-185 49-151 (300)
66 KOG0195 Integrin-linked kinase 99.6 3.7E-15 8.1E-20 152.3 8.4 142 23-203 20-161 (448)
67 KOG0512 Fetal globin-inducing 99.6 1.5E-14 3.3E-19 138.8 11.3 113 94-214 91-204 (228)
68 KOG0507 CASK-interacting adapt 99.6 2.2E-15 4.7E-20 170.5 6.5 170 29-257 41-210 (854)
69 KOG3676 Ca2+-permeable cation 99.6 7.1E-15 1.5E-19 168.4 10.3 120 98-253 182-325 (782)
70 KOG0512 Fetal globin-inducing 99.6 7.2E-15 1.6E-19 141.0 8.5 138 103-248 66-210 (228)
71 KOG4369 RTK signaling protein 99.5 6.6E-15 1.4E-19 169.9 7.5 167 79-254 904-1078(2131)
72 cd00204 ANK ankyrin repeats; 99.5 8.6E-14 1.9E-18 125.8 9.0 119 97-252 4-122 (126)
73 PF12796 Ank_2: Ankyrin repeat 99.5 2.8E-13 6E-18 118.3 9.7 64 100-168 26-89 (89)
74 KOG3676 Ca2+-permeable cation 99.4 5.6E-13 1.2E-17 153.0 12.1 174 3-198 134-331 (782)
75 cd00204 ANK ankyrin repeats; 99.4 2.7E-12 5.9E-17 116.0 13.1 121 38-195 6-126 (126)
76 KOG4214 Myotrophin and similar 99.4 1.3E-12 2.8E-17 113.6 7.9 98 103-210 5-102 (117)
77 COG0666 Arp FOG: Ankyrin repea 99.4 5.4E-12 1.2E-16 125.4 12.7 125 37-198 71-203 (235)
78 PTZ00322 6-phosphofructo-2-kin 99.3 4.1E-12 8.8E-17 150.4 11.3 105 102-215 84-195 (664)
79 KOG4214 Myotrophin and similar 99.3 6.8E-12 1.5E-16 109.2 8.9 96 77-178 12-107 (117)
80 COG0666 Arp FOG: Ankyrin repea 99.3 1.6E-11 3.5E-16 121.9 12.0 128 96-257 69-201 (235)
81 PF13857 Ank_5: Ankyrin repeat 99.3 2.5E-12 5.4E-17 103.6 4.3 55 119-178 1-56 (56)
82 PF13637 Ank_4: Ankyrin repeat 99.2 1.9E-11 4.2E-16 97.3 6.6 54 100-158 1-54 (54)
83 PF13637 Ank_4: Ankyrin repeat 99.1 6.7E-11 1.5E-15 94.2 5.2 54 135-195 1-54 (54)
84 KOG0515 p53-interacting protei 99.1 8.9E-11 1.9E-15 128.5 7.4 92 98-196 581-673 (752)
85 PTZ00322 6-phosphofructo-2-kin 99.1 1.9E-10 4.1E-15 136.3 10.4 96 79-179 94-196 (664)
86 KOG0515 p53-interacting protei 99.1 2.1E-10 4.5E-15 125.7 7.7 91 104-203 554-644 (752)
87 KOG1710 MYND Zn-finger and ank 99.0 6.3E-10 1.4E-14 114.5 9.5 92 90-185 35-126 (396)
88 PF13857 Ank_5: Ankyrin repeat 99.0 4.4E-10 9.6E-15 90.4 4.4 50 91-142 7-56 (56)
89 KOG1710 MYND Zn-finger and ank 98.9 4.3E-09 9.4E-14 108.5 9.1 103 100-211 12-115 (396)
90 KOG0783 Uncharacterized conser 98.6 3.1E-08 6.6E-13 113.6 4.4 87 90-180 42-128 (1267)
91 KOG0818 GTPase-activating prot 98.6 1.3E-07 2.9E-12 103.4 8.8 87 103-193 136-222 (669)
92 KOG1677 CCCH-type Zn-finger pr 98.6 5.8E-08 1.3E-12 105.9 6.0 87 288-374 103-210 (332)
93 PF00023 Ank: Ankyrin repeat H 98.4 3E-07 6.4E-12 65.8 4.4 33 134-169 1-33 (33)
94 KOG0506 Glutaminase (contains 98.4 2E-07 4.4E-12 101.7 5.2 92 98-198 504-596 (622)
95 PF13606 Ank_3: Ankyrin repeat 98.4 3.3E-07 7.1E-12 64.4 3.8 28 135-165 2-29 (30)
96 KOG1595 CCCH-type Zn-finger pr 98.4 2.6E-07 5.7E-12 102.9 4.0 198 134-368 57-262 (528)
97 KOG0783 Uncharacterized conser 98.3 2.4E-07 5.2E-12 106.5 2.7 89 118-214 36-125 (1267)
98 PF13606 Ank_3: Ankyrin repeat 98.3 6.3E-07 1.4E-11 62.9 3.8 30 99-129 1-30 (30)
99 KOG0522 Ankyrin repeat protein 98.2 1.3E-06 2.8E-11 97.1 6.4 80 102-185 22-102 (560)
100 PF00023 Ank: Ankyrin repeat H 98.2 1.8E-06 4E-11 61.6 4.0 31 99-130 1-31 (33)
101 KOG0705 GTPase-activating prot 98.2 3.3E-06 7.1E-11 94.3 7.9 91 104-202 628-721 (749)
102 KOG0782 Predicted diacylglycer 98.1 5.6E-06 1.2E-10 91.9 6.3 92 98-197 897-989 (1004)
103 KOG0506 Glutaminase (contains 98.0 5.5E-06 1.2E-10 90.8 4.1 77 82-162 521-597 (622)
104 KOG0521 Putative GTPase activa 98.0 1E-05 2.2E-10 96.7 6.7 80 97-181 653-732 (785)
105 COG5063 CTH1 CCCH-type Zn-fing 97.9 5.4E-06 1.2E-10 86.4 3.0 69 307-375 225-308 (351)
106 KOG0818 GTPase-activating prot 97.9 5.2E-06 1.1E-10 91.3 3.0 92 132-258 124-222 (669)
107 KOG0705 GTPase-activating prot 97.8 3.2E-05 6.9E-10 86.6 7.3 62 98-164 659-720 (749)
108 KOG0782 Predicted diacylglycer 97.8 3.7E-05 7.9E-10 85.7 6.8 100 104-212 870-971 (1004)
109 KOG0511 Ankyrin repeat protein 97.8 7.8E-05 1.7E-09 80.0 8.3 73 101-178 37-109 (516)
110 KOG3609 Receptor-activated Ca2 97.7 2.6E-05 5.6E-10 91.4 3.5 150 100-285 25-177 (822)
111 KOG2384 Major histocompatibili 97.6 0.00014 3.1E-09 71.8 6.9 75 91-170 3-78 (223)
112 KOG2384 Major histocompatibili 97.6 0.00011 2.3E-09 72.6 6.0 67 124-198 2-69 (223)
113 KOG0522 Ankyrin repeat protein 97.5 0.00014 2.9E-09 81.4 6.5 66 90-160 45-110 (560)
114 KOG0521 Putative GTPase activa 97.5 6.8E-05 1.5E-09 89.9 4.1 81 124-211 644-725 (785)
115 KOG0520 Uncharacterized conser 97.4 0.00016 3.4E-09 86.5 4.6 128 98-256 572-700 (975)
116 KOG0520 Uncharacterized conser 97.3 0.00015 3.4E-09 86.6 4.1 125 37-197 572-702 (975)
117 KOG3609 Receptor-activated Ca2 97.1 0.0006 1.3E-08 80.2 5.8 97 91-203 53-159 (822)
118 KOG0511 Ankyrin repeat protein 96.9 0.0014 3E-08 70.7 6.0 68 136-210 37-104 (516)
119 KOG2494 C3H1-type Zn-finger pr 96.9 0.00032 7E-09 74.4 0.8 66 311-378 38-106 (331)
120 PF00642 zf-CCCH: Zinc finger 96.5 0.00046 9.9E-09 47.3 -0.6 25 308-332 1-26 (27)
121 KOG1677 CCCH-type Zn-finger pr 96.5 0.0022 4.9E-08 70.0 3.9 66 273-338 130-206 (332)
122 KOG2505 Ankyrin repeat protein 96.1 0.0086 1.9E-07 66.9 5.9 64 113-180 404-472 (591)
123 COG5063 CTH1 CCCH-type Zn-fing 96.1 0.0074 1.6E-07 63.5 4.8 83 286-369 248-342 (351)
124 smart00356 ZnF_C3H1 zinc finge 96.0 0.0051 1.1E-07 41.6 2.4 25 308-332 2-26 (27)
125 smart00248 ANK ankyrin repeats 96.0 0.011 2.3E-07 38.3 3.9 27 135-164 2-28 (30)
126 smart00248 ANK ankyrin repeats 95.8 0.014 3E-07 37.7 3.8 29 99-128 1-29 (30)
127 PF00642 zf-CCCH: Zinc finger 95.6 0.0028 6.1E-08 43.4 -0.3 23 343-365 1-27 (27)
128 KOG3702 Nuclear polyadenylated 94.6 0.039 8.4E-07 63.8 4.7 89 274-366 543-646 (681)
129 PF14608 zf-CCCH_2: Zinc finge 92.7 0.074 1.6E-06 33.4 1.6 17 347-363 1-18 (19)
130 smart00356 ZnF_C3H1 zinc finge 92.5 0.087 1.9E-06 35.4 1.9 23 343-365 2-27 (27)
131 KOG1492 C3H1-type Zn-finger pr 91.0 0.14 3.1E-06 51.6 2.3 65 281-364 216-282 (377)
132 KOG2505 Ankyrin repeat protein 90.4 0.24 5.1E-06 55.8 3.6 43 99-143 429-471 (591)
133 KOG1040 Polyadenylation factor 89.6 0.17 3.8E-06 55.0 1.8 53 306-365 73-129 (325)
134 PF06128 Shigella_OspC: Shigel 88.9 1.7 3.6E-05 44.8 8.0 96 99-201 178-280 (284)
135 KOG2333 Uncharacterized conser 88.9 0.21 4.5E-06 56.2 1.7 60 309-370 75-145 (614)
136 COG5252 Uncharacterized conser 86.6 0.086 1.9E-06 53.8 -2.6 61 307-367 82-177 (299)
137 KOG1763 Uncharacterized conser 85.7 0.15 3.3E-06 53.7 -1.4 27 308-334 90-116 (343)
138 PF14608 zf-CCCH_2: Zinc finge 84.9 0.71 1.5E-05 29.0 1.8 19 312-332 1-19 (19)
139 KOG1040 Polyadenylation factor 83.8 0.97 2.1E-05 49.3 3.5 16 318-333 114-129 (325)
140 KOG2185 Predicted RNA-processi 75.4 1.6 3.5E-05 48.1 1.9 30 336-365 131-163 (486)
141 COG5084 YTH1 Cleavage and poly 75.1 2.6 5.7E-05 45.1 3.3 52 307-365 101-158 (285)
142 KOG2494 C3H1-type Zn-finger pr 72.7 2.1 4.6E-05 46.2 1.9 67 258-335 29-95 (331)
143 COG5152 Uncharacterized conser 71.9 1.8 3.9E-05 43.4 1.1 30 305-334 136-166 (259)
144 PF11929 DUF3447: Domain of un 70.1 8 0.00017 32.9 4.6 47 102-160 8-54 (76)
145 KOG3702 Nuclear polyadenylated 70.0 6.5 0.00014 46.2 5.1 75 278-366 588-666 (681)
146 KOG4791 Uncharacterized conser 67.0 4.2 9.1E-05 45.8 2.7 68 285-368 16-87 (667)
147 KOG2185 Predicted RNA-processi 61.7 4.6 0.0001 44.8 1.8 54 276-333 100-163 (486)
148 PF06128 Shigella_OspC: Shigel 60.6 14 0.00031 38.3 4.9 50 111-163 228-279 (284)
149 KOG1492 C3H1-type Zn-finger pr 60.0 4.8 0.0001 40.9 1.5 52 311-371 207-262 (377)
150 KOG1813 Predicted E3 ubiquitin 57.1 4.5 9.8E-05 43.2 0.8 33 304-336 180-213 (313)
151 PF11929 DUF3447: Domain of un 49.8 18 0.00039 30.7 3.2 47 137-197 8-54 (76)
152 KOG2333 Uncharacterized conser 41.1 14 0.00031 42.1 1.5 48 287-337 94-144 (614)
153 COG5084 YTH1 Cleavage and poly 39.4 1.9E+02 0.0041 31.3 9.5 74 273-366 110-190 (285)
154 KOG4791 Uncharacterized conser 35.6 9.9 0.00021 43.0 -0.7 50 313-368 6-57 (667)
155 PF03158 DUF249: Multigene fam 34.0 67 0.0015 32.4 4.8 46 138-196 146-191 (192)
156 PF03158 DUF249: Multigene fam 31.5 74 0.0016 32.2 4.7 46 103-159 146-191 (192)
157 KOG0153 Predicted RNA-binding 30.5 27 0.00057 38.3 1.5 26 308-333 159-184 (377)
158 PF10650 zf-C3H1: Putative zin 27.8 35 0.00076 22.7 1.1 11 353-363 11-21 (23)
159 KOG1039 Predicted E3 ubiquitin 27.8 24 0.00052 39.0 0.6 24 311-334 9-32 (344)
160 COG5252 Uncharacterized conser 21.0 22 0.00047 36.9 -1.2 29 343-371 83-114 (299)
No 1
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=100.00 E-value=1.4e-77 Score=651.80 Aligned_cols=474 Identities=42% Similarity=0.594 Sum_probs=362.4
Q ss_pred chhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHH
Q 004887 80 RNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLF 159 (725)
Q Consensus 80 ~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~ 159 (725)
.+...+||....+.+.+..+.+|+|++|+.+|.++++.+++...-.++|..|..++. |+|+.+...+.+|++..|+.
T Consensus 38 ~~~~~~~~r~~~~~k~~~~~qR~~~~v~~~~Gs~~~~~~i~~~~~~e~~~~C~~~~~---~C~~~g~s~~~~e~~~hL~~ 114 (528)
T KOG1595|consen 38 LQHKCLQHRPFVCFKWHFLNQRRRRPVARRDGSFNYSPDIYCTKYDEVTGICPDGDE---HCAVLGRSVGDTERTYHLRY 114 (528)
T ss_pred hhhhhcccccchhhhhhhhccccccchhhhcCccccccceeecchhhccccCCCCcc---cchhcccccCCcceeEeccc
Confidence 445568888888888889999999999999999999999998867889988654444 99988887777999999999
Q ss_pred CCCCCCCcCCCCCcHHHHH---HhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCC
Q 004887 160 AGADSNLTDAHGNRPFDVI---VVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSD 236 (725)
Q Consensus 160 ~GADin~~D~~G~TPLhlA---~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G 236 (725)
+++..+.+|..|+-+...+ ... ...+...+++.|++.+. +... .+..+
T Consensus 115 ~k~~~~~tda~g~~~~~v~~~~~~~-~~~~~r~~~~~l~e~~~--------~~~~--------------------~~~e~ 165 (528)
T KOG1595|consen 115 YKTLPCVTDARGNCVKNVLHCAFAH-GPNDLRPPVEDLLELQG--------GSGL--------------------PDDEP 165 (528)
T ss_pred cccccCccccCCCcccCcccccccC-CccccccHHHHHHhccc--------ccCc--------------------cCCCc
Confidence 9999999999998765443 332 23456778888888762 0100 00000
Q ss_pred CCcccccccCCCcCccCCCCccccccccchhhhhccccccccccccCCCCCCCCCCCCCCcccCCCCccCccCcCCCCCc
Q 004887 237 DVHAFVAPEKKEYPIDPSLPDIKDSIYASDEFRMYSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYSCMPCPDH 316 (725)
Q Consensus 237 ~TpL~~A~e~g~~~vd~~Lpdi~~~iy~~Defrm~~fkv~~Csr~~~hd~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~ 316 (725)
+.... ...-.|++|+.||||+ ++|++|+||||+|||++|.|.++|||++|||+|++||+||||||+|+|.++.||+|
T Consensus 166 ~~~~~--~~~~~y~~Dp~~pdi~-~~ys~DeFrMy~fKir~C~R~~shDwteCPf~HpgEkARRRDPRkyhYs~tpCPef 242 (528)
T KOG1595|consen 166 EVESK--LDVTEYPEDPSWPDIN-GIYSSDEFRMYSFKIRRCSRPRSHDWTECPFAHPGEKARRRDPRKYHYSSTPCPEF 242 (528)
T ss_pred ccccc--cccccccCCCCccccc-ccccccceEEEeeeecccCCccCCCcccCCccCCCcccccCCcccccccCccCccc
Confidence 00000 0111899999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccCCccccccCCcccccccCCCCCCCCCCccccCCCcCcccccccCCCCCCCC-cccccccc-CCCCC
Q 004887 317 RKGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDGTSCMRRVCFFAHALDELRPLYASTGSGMPS-PQSATAMN-MLPGS 394 (725)
Q Consensus 317 ~~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~~~C~~~~C~faH~~~elr~~~~~~~~~~~~-~~~~~~~~-~~~~~ 394 (725)
++|.|.+||.|+||||++|||+||++|||++|+++++|+|++|||||.++|||++|.++|+..++ |+++++++ .....
T Consensus 243 rkG~C~rGD~CEyaHgvfEcwLHPa~YRT~~CkDg~~C~RrvCfFAH~~eqLR~l~~s~~s~~~~sp~~s~~sp~~~~~~ 322 (528)
T KOG1595|consen 243 RKGSCERGDSCEYAHGVFECWLHPARYRTRKCKDGGYCPRRVCFFAHSPEQLRPLPPSTGSDRPSSPSSSSASPMMASLR 322 (528)
T ss_pred ccCCCCCCCccccccceehhhcCHHHhccccccCCCCCccceEeeecChHHhcccCCCCCCCCCCCcccccCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999887 55433221 11111
Q ss_pred CCccCCCCCCCCCCCCCC-C--CCCCCCCCCCCCCCCCccCCCCCcccc-ccccccccCCCCChhhhhhhhhhhhHHhhh
Q 004887 395 PSAVSAMLPSPFTPPMSP-S--NDILCLSMAWPQQNIPTLHLPSSNLQA-SRLRSSLNARDIPVEDLGMLRDFEMQNQLI 470 (725)
Q Consensus 395 ~~~~~~~~~~~~~~p~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (725)
..+.+|++.+||++| + ..+++.++.|.+++++++..|+.+|+. |||++.++||+|...
T Consensus 323 ---~~~~s~~~~~~p~sp~~~~~~~~~~~~~s~~~~~~~~~~p~~~~~~~Srl~s~~~a~~i~~~--------------- 384 (528)
T KOG1595|consen 323 ---SLPFSPSPGSPPLSPSANGVSSPIASGGSRSLNSNSPSSPAAPLRSFSRLSSSLSAADISMS--------------- 384 (528)
T ss_pred ---cCCCCCCCCCCCCCccccccccccccccccccCCCCCCCccccccccccccccccccccccc---------------
Confidence 123345558899999 4 446667888999999999999999988 999999999998321
Q ss_pred hhcccCCCCCCCCCCCCcccccCCCCCCcccccccCCCCCCCccccccccccccccchhhhhhHHHHHhhhcCCCCCcCc
Q 004887 471 NEFSHSQPQFGTSSGGNMSVRLNRLTPTKLDQLSYPEISSPQYSDQFAASNVFSPSHKSMVLNQLQQQQQNMSSPINTNV 550 (725)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (725)
+ + ++.- ||+++|++++++ +.-+|+|+.++.+.+|++|++
T Consensus 385 ~------------~-~~~~---------~l~~~f~s~~ss-------------------sl~~~~~~~~~~~tsP~~~~~ 423 (528)
T KOG1595|consen 385 S------------P-MNLG---------NLSELFSSPDSS-------------------SLNPQLQVLSSAPTSPVFTDT 423 (528)
T ss_pred c------------c-cccc---------cchhhhcCcccc-------------------ccchhhhhcccCCcCCcCCcc
Confidence 0 0 1110 899999998875 122456544355677776652
Q ss_pred CCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCcccc-ccchhhHHHHHhhhccccccCCCCCccCCCCCCCCCCCCCC
Q 004887 551 FSPMNVDHPLLQASFGISSPGRMSPRKMEPISPMSPRV-STLTPREKLLQQLHSLSLREHGPRLSCDLKSDSPIGSVLNS 629 (725)
Q Consensus 551 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (725)
++. .+++..+..|.-+ ..+|++|. .+|++|+-+ ++ .+...+.+ ...+.
T Consensus 424 ~~~----------~~~~e~s~~~~~~----~~~~~~r~l~~~l~~~~~------~s-~~~~~~~~----------~~~~~ 472 (528)
T KOG1595|consen 424 ASF----------GSSVESSPAMEGR----SQVMSSRELRASLKRSST------LS-DKPAMNSS----------GQFSF 472 (528)
T ss_pred ccc----------ccccccchhhhcc----cccccchhhhhhhccccc------cc-ccccccCc----------ccccc
Confidence 221 1222322233322 25888888 777777421 11 12111111 01122
Q ss_pred C-CCCCCCCC-CcccccChhhhccccccCCCCCC-CCCCCcchhhhcccCCC
Q 004887 630 W-SKLESPSM-KIDWSIQADELNHLRRSHSFGRN-GEGLDVSTVQSHMRETP 678 (725)
Q Consensus 630 ~-s~wgs~~g-k~dw~~~~~el~~~~~s~s~~~~-~~epd~swv~~~vk~~~ 678 (725)
| +|||+.+| ++||++|+|||+|+|++.||+.+ ..||||||||+||||.+
T Consensus 473 ~~~d~g~~~g~~~d~~~~~~~l~~~r~~~s~~~~~~~~pd~swv~~ll~~~~ 524 (528)
T KOG1595|consen 473 NNSDWGPRAGELLDWGVQSDLLNKLRESTSFELGSAGEPDVSWVQSLLKEPA 524 (528)
T ss_pred ccCCcCcccCcccchhhhHHHHhhcccCcccccCCCCCcCcchhhhhccccc
Confidence 3 79999999 99999999999999999999983 46999999999999986
No 2
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.95 E-value=5.2e-28 Score=271.53 Aligned_cols=244 Identities=16% Similarity=0.119 Sum_probs=195.5
Q ss_pred cCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCC
Q 004887 3 AVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPS 74 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~ 74 (725)
.++++.+.+|.||||+| +++|+++|+++|..+. .|.||||+|+..++.++.......+.......
T Consensus 26 ~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~--~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~----- 98 (434)
T PHA02874 26 NCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINT--KIPHPLLTAIKIGAHDIIKLLIDNGVDTSILP----- 98 (434)
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCHHHHHHHHHCCCCCCcch-----
Confidence 34678888999999999 8899999999999998 99999999999988877433322211110000
Q ss_pred CCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHH
Q 004887 75 KPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVV 154 (725)
Q Consensus 75 ~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiV 154 (725)
........+.+++..+.+.+..+..|.||||+|+..|+.++|++|+++ |+++|.+ +.+|.||||+|+..|+ .+++
T Consensus 99 ~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~-gad~n~~-d~~g~tpLh~A~~~~~---~~iv 173 (434)
T PHA02874 99 IPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEY-GADVNIE-DDNGCYPIHIAIKHNF---FDII 173 (434)
T ss_pred hccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhC-CCCCCCc-CCCCCCHHHHHHHCCc---HHHH
Confidence 111234566677777777788888999999999999999999999999 9999999 8999999999999999 9999
Q ss_pred HHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCC---CCCCCCccc
Q 004887 155 KLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSS---SDDSSLSSL 231 (725)
Q Consensus 155 klLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s---~~~~~~~~~ 231 (725)
++|++.|++++..|..|+||||+|+..|+ .+++++|+++|++++.++..|.||++.+....... ...+.+++.
T Consensus 174 ~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~----~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~ 249 (434)
T PHA02874 174 KLLLEKGAYANVKDNNGESPLHNAAEYGD----YACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIELLINNASIND 249 (434)
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCC
Confidence 99999999999999999999999999855 45999999999999999999999998876522111 122667888
Q ss_pred cccCCCCcccccccCC-CcCccCCCCcccccc
Q 004887 232 TCKSDDVHAFVAPEKK-EYPIDPSLPDIKDSI 262 (725)
Q Consensus 232 ~~~~G~TpL~~A~e~g-~~~vd~~Lpdi~~~i 262 (725)
++..|.||||+|+..+ +.+++..|.+.+..+
T Consensus 250 ~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~ 281 (434)
T PHA02874 250 QDIDGSTPLHHAINPPCDIDIIDILLYHKADI 281 (434)
T ss_pred cCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCC
Confidence 9999999999999865 566766555444333
No 3
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.94 E-value=3.9e-27 Score=267.63 Aligned_cols=230 Identities=19% Similarity=0.105 Sum_probs=182.4
Q ss_pred CCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCc---------------------
Q 004887 8 TMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGS--------------------- 58 (725)
Q Consensus 8 ~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~--------------------- 58 (725)
.+..+.||||+| +++|+++|+|+|.+|. .|+||||+||..|+.+.....
T Consensus 33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~--~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~a~~ 110 (477)
T PHA02878 33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDH--RDLTPLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKDAFN 110 (477)
T ss_pred ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHCccHhHHHHHHHHHhccccccchhhHHHHHH
Confidence 445789999999 8899999999999998 999999999998887652111
Q ss_pred ---hhhhhcccCCCCCCC------------CCCCccchhHHHHHHhhCCchhhhcC-CChHHHHHHHcCCHHHHHHHHhc
Q 004887 59 ---EKLSSKALAPSASPP------------SKPSLQRNMIGLWYSFQRLSKKIVLQ-HRTPLMVAAEYGSVDVVKLILSL 122 (725)
Q Consensus 59 ---~~l~~~lL~~aa~~~------------~~~~~~~~~~~L~~a~~~g~~~~~~~-G~TPLh~Aa~~G~~eiVk~LLe~ 122 (725)
.++...++....... .....+.+.+.+++..+.+.+..+.. |.||||+|+..|+.+++++||++
T Consensus 111 ~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~ 190 (477)
T PHA02878 111 NRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSY 190 (477)
T ss_pred cCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHC
Confidence 111111111100000 00001123666777778888888878 99999999999999999999999
Q ss_pred CCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCC
Q 004887 123 TKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVS 202 (725)
Q Consensus 123 ~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn 202 (725)
|+++|.. +..|.||||+|+..|+ .++|++|++.|++++.+|..|+||||+|+..+ ...+++++|+++|++++
T Consensus 191 -gad~n~~-d~~g~tpLh~A~~~~~---~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~---~~~~iv~~Ll~~gadvn 262 (477)
T PHA02878 191 -GANVNIP-DKTNNSPLHHAVKHYN---KPIVHILLENGASTDARDKCGNTPLHISVGYC---KDYDILKLLLEHGVDVN 262 (477)
T ss_pred -CCCCCCc-CCCCCCHHHHHHHhCC---HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhc---CCHHHHHHHHHcCCCCC
Confidence 9999999 9999999999999999 99999999999999999999999999999742 34569999999999999
Q ss_pred Cccc-cccccccccccC---CCCCCCCCCCccccccCCCCcccccccCC
Q 004887 203 FDEL-QVSSVDLRSSSS---LSSSSDDSSLSSLTCKSDDVHAFVAPEKK 247 (725)
Q Consensus 203 ~~d~-~g~Tp~~~ass~---ls~s~~~~~~~~~~~~~G~TpL~~A~e~g 247 (725)
.++. .|.||++.+... .....+.+.+++..+..|.||||+|++.+
T Consensus 263 ~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~~d~~g~TpL~~A~~~~ 311 (477)
T PHA02878 263 AKSYILGLTALHSSIKSERKLKLLLEYGADINSLNSYKLTPLSSAVKQY 311 (477)
T ss_pred ccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHc
Confidence 9886 899999988331 11113348899999999999999998743
No 4
>PHA03095 ankyrin-like protein; Provisional
Probab=99.94 E-value=6.1e-27 Score=264.41 Aligned_cols=245 Identities=16% Similarity=0.111 Sum_probs=181.5
Q ss_pred ccCCccCCCCCCcHHHHH-----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCC-hhh------hcCchh---
Q 004887 2 VAVPAVTMRNKSSPLKIS-----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNY-LIM------CGGSEK--- 60 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA-----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~-~ei------~ga~~~--- 60 (725)
.||+|..+..|.||||+| +++|+++|+|+|.++. .|+||||+|+..++ .++ .|++.+
T Consensus 37 ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~--~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~ 114 (471)
T PHA03095 37 GADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER--CGFTPLHLYLYNATTLDVIKLLIKAGADVNAKD 114 (471)
T ss_pred CCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCC
Confidence 589999999999999998 6789999999999998 99999999998884 544 222221
Q ss_pred -hhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcC--CHHHHHHHHhcCCCCcccccCCCCch
Q 004887 61 -LSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYG--SVDVVKLILSLTKADVNLTCGLDKST 137 (725)
Q Consensus 61 -l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G--~~eiVk~LLe~~GadVN~~~d~~G~T 137 (725)
.+.++|+.++. ........+.+++..+.+.+..+..|.||||+|+..+ +.+++++|+++ |++++.. +..|.|
T Consensus 115 ~~g~tpLh~a~~---~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~-g~~~~~~-d~~g~t 189 (471)
T PHA03095 115 KVGRTPLHVYLS---GFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDA-GADVYAV-DDRFRS 189 (471)
T ss_pred CCCCCHHHHHhh---CCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCccc-CCCCCC
Confidence 12233332220 0112233444445555555556678888888888765 57888888888 8888888 888888
Q ss_pred HHHHHHhC--CCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccc
Q 004887 138 ALHCAASG--GSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRS 215 (725)
Q Consensus 138 pLH~Aa~~--G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~a 215 (725)
|||+|+.. +. .+++++|++.|++++.+|..|+||||+|+..|+. ...+++.|+..|++++.+|..|.||++.+
T Consensus 190 ~Lh~~~~~~~~~---~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~--~~~~v~~ll~~g~din~~d~~g~TpLh~A 264 (471)
T PHA03095 190 LLHHHLQSFKPR---ARIVRELIRAGCDPAATDMLGNTPLHSMATGSSC--KRSLVLPLLIAGISINARNRYGQTPLHYA 264 (471)
T ss_pred HHHHHHHHCCCc---HHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCc--hHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 88888765 44 7888888888888888888888888888887542 34577888888888888888888888877
Q ss_pred ccCCCCC-----CCCCCCccccccCCCCcccccccCCCcCccCCCCcc
Q 004887 216 SSSLSSS-----SDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDI 258 (725)
Q Consensus 216 ss~ls~s-----~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi 258 (725)
....... .+.+.++++++..|.||||+|+++++.+++..|...
T Consensus 265 ~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~ 312 (471)
T PHA03095 265 AVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAK 312 (471)
T ss_pred HHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHh
Confidence 6522222 233778888888888888888888888887766544
No 5
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=7.7e-28 Score=230.86 Aligned_cols=185 Identities=20% Similarity=0.173 Sum_probs=139.6
Q ss_pred HHHHHHCCC-CccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHH-HhhCCchhhh
Q 004887 20 ISIFQKHTQ-NVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWY-SFQRLSKKIV 97 (725)
Q Consensus 20 vklLL~~GA-DVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~-a~~~g~~~~~ 97 (725)
++.|++..- .+|.++ |.+||||||+||..|+.++. -+++ ......++.|
T Consensus 19 veel~~s~~kSL~~r~-dqD~Rt~LHwa~S~g~~eiv----------------------------~fLlsq~nv~~ddkD 69 (226)
T KOG4412|consen 19 VEELIQSDPKSLNARD-DQDGRTPLHWACSFGHVEIV----------------------------YFLLSQPNVKPDDKD 69 (226)
T ss_pred HHHHHhcChhhhhccc-cccCCceeeeeeecCchhHH----------------------------HHHHhcCCCCCCCcc
Confidence 555555544 678888 78899999999976665543 1222 2344556667
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDV 177 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhl 177 (725)
..|+||||+||..|+.++|+.||.+.|+|||+. +..|.|+||||+..|. .+|+++||+.||.|+++|..|.||||-
T Consensus 70 daGWtPlhia~s~g~~evVk~Ll~r~~advna~-tn~G~T~LHyAagK~r---~eIaqlLle~ga~i~~kD~~~qtplHR 145 (226)
T KOG4412|consen 70 DAGWTPLHIAASNGNDEVVKELLNRSGADVNAT-TNGGQTCLHYAAGKGR---LEIAQLLLEKGALIRIKDKQGQTPLHR 145 (226)
T ss_pred ccCCchhhhhhhcCcHHHHHHHhcCCCCCccee-cCCCcceehhhhcCCh---hhHHHHHHhcCCCCcccccccCchhHH
Confidence 889999999999999999999999889999998 8999999999999999 999999999999999999999999999
Q ss_pred HHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccccc-CCCCC----CCCCCCccccccCCCCcccc
Q 004887 178 IVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSS-SLSSS----SDDSSLSSLTCKSDDVHAFV 242 (725)
Q Consensus 178 A~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass-~ls~s----~~~~~~~~~~~~~G~TpL~~ 242 (725)
|+..|+++ ++++|+..|+.+|..|..|.||++.+-. ..... .+.+++.+++|+.| ||+-.
T Consensus 146 AAavGklk----vie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~ 210 (226)
T KOG4412|consen 146 AAAVGKLK----VIEYLISQGAPLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRI 210 (226)
T ss_pred HHhccchh----hHHHHHhcCCCCCcccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHH
Confidence 99987766 9999999999998766666666555422 21111 11245555666655 55443
No 6
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.94 E-value=6.9e-27 Score=273.62 Aligned_cols=251 Identities=15% Similarity=0.034 Sum_probs=179.0
Q ss_pred cCCccC-CCCCCcHHHHH----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCCh--hh------hcCchhh--
Q 004887 3 AVPAVT-MRNKSSPLKIS----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYL--IM------CGGSEKL-- 61 (725)
Q Consensus 3 Adpdv~-d~~G~TPLhiA----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~--ei------~ga~~~l-- 61 (725)
||+|.. |..|.||||+| +++|+++|+|||.+|. +|+||||+|+..++. ++ .|++.+.
T Consensus 167 ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~--~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD 244 (764)
T PHA02716 167 VNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNN--HLITPLHTYLITGNVCASVIKKIIELGGDMDMKC 244 (764)
T ss_pred CCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCC--CCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCC
Confidence 677777 77788888875 7788888888888877 788888888877753 22 3444322
Q ss_pred --hhcccCCCCC------------------CC--------------CCCCccchhHHHHHHhhCCchhhhcCCChHHHHH
Q 004887 62 --SSKALAPSAS------------------PP--------------SKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVA 107 (725)
Q Consensus 62 --~~~lL~~aa~------------------~~--------------~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~A 107 (725)
+.++|+.++. .. ....+..+.+.+++..+.+.+..+..|+||||+|
T Consensus 245 ~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~A 324 (764)
T PHA02716 245 VNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQY 324 (764)
T ss_pred CCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHH
Confidence 2233332110 00 0011234455666666777777788999999998
Q ss_pred HH--cCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhC--------------CCCCHHHHHHHHHHCCCCCCCcCCCC
Q 004887 108 AE--YGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASG--------------GSVNAVDVVKLLLFAGADSNLTDAHG 171 (725)
Q Consensus 108 a~--~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~--------------G~~~~~eiVklLL~~GADin~~D~~G 171 (725)
+. +++.+++++||+. |+++|.+ |..|+||||+|+.. ++ .++|++|+++|||++.+|..|
T Consensus 325 aa~~~~~~eIVklLLe~-GADIN~k-D~~G~TPLH~A~~~lav~~~ld~~~~~~~~---~eVVklLL~~GADIn~kn~~G 399 (764)
T PHA02716 325 ILRHNISTDIIKLLHEY-GNDLNEP-DNIGNTVLHTYLSMLSVVNILDPETDNDIR---LDVIQCLISLGADITAVNCLG 399 (764)
T ss_pred HHHhCCCchHHHHHHHc-CCCCccC-CCCCCCHHHHHHHhhhhhccccccccccCh---HHHHHHHHHCCCCCCCcCCCC
Confidence 74 5689999999999 9999999 99999999998752 45 899999999999999999999
Q ss_pred CcHHHHHH-hCCCCCCHHHHHHHHHHCC----------------------------------------------------
Q 004887 172 NRPFDVIV-VHPNVPDSRVSLEDLLKNG---------------------------------------------------- 198 (725)
Q Consensus 172 ~TPLhlA~-~~g~~e~~~~ivelLL~~G---------------------------------------------------- 198 (725)
+||||.++ ...+ .+..+++++|++.|
T Consensus 400 ~TPLh~y~~~a~n-~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~ 478 (764)
T PHA02716 400 YTPLTSYICTAQN-YMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHD 478 (764)
T ss_pred CChHHHHHHHHHh-cChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccch
Confidence 99999432 2111 13455666666543
Q ss_pred ---------CCCCCccccccccccccccC-CC---------CCCCCCCCccccccCCCCcccccccCCCc-----CccCC
Q 004887 199 ---------GSVSFDELQVSSVDLRSSSS-LS---------SSSDDSSLSSLTCKSDDVHAFVAPEKKEY-----PIDPS 254 (725)
Q Consensus 199 ---------advn~~d~~g~Tp~~~ass~-ls---------~s~~~~~~~~~~~~~G~TpL~~A~e~g~~-----~vd~~ 254 (725)
.+++..|..|.||++.+... .. ...+.+.+++.+++.|.||||+|+++|++ +|+..
T Consensus 479 v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~ 558 (764)
T PHA02716 479 VYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKN 558 (764)
T ss_pred hhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHH
Confidence 23455677899999988762 22 12334889999999999999999999988 77776
Q ss_pred CCccccc
Q 004887 255 LPDIKDS 261 (725)
Q Consensus 255 Lpdi~~~ 261 (725)
|.+.+..
T Consensus 559 LL~~ga~ 565 (764)
T PHA02716 559 ILDKRPN 565 (764)
T ss_pred HHhcCCC
Confidence 6654433
No 7
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=3.3e-27 Score=226.50 Aligned_cols=168 Identities=17% Similarity=0.117 Sum_probs=146.1
Q ss_pred ccCCC-CCCcHHHHH--------HHHHH-HCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCC
Q 004887 6 AVTMR-NKSSPLKIS--------ISIFQ-KHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSK 75 (725)
Q Consensus 6 dv~d~-~G~TPLhiA--------vklLL-~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~ 75 (725)
+.++. +|+||||+| +++|+ ..+..+|.+|. .||||||+|+..|+.+++.
T Consensus 31 ~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDd--aGWtPlhia~s~g~~evVk------------------- 89 (226)
T KOG4412|consen 31 NARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDD--AGWTPLHIAASNGNDEVVK------------------- 89 (226)
T ss_pred hccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccc--cCCchhhhhhhcCcHHHHH-------------------
Confidence 45555 999999999 77888 55778888876 9999999999766555432
Q ss_pred CCccchhHHHHHHh-hCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHH
Q 004887 76 PSLQRNMIGLWYSF-QRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVV 154 (725)
Q Consensus 76 ~~~~~~~~~L~~a~-~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiV 154 (725)
-+|.+ +.+.+.+...|.|+||+|+..|..+|+++||++ |+.|+.+ |..|.||||-|+..|. .+++
T Consensus 90 ---------~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~-ga~i~~k-D~~~qtplHRAAavGk---lkvi 155 (226)
T KOG4412|consen 90 ---------ELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEK-GALIRIK-DKQGQTPLHRAAAVGK---LKVI 155 (226)
T ss_pred ---------HHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhc-CCCCccc-ccccCchhHHHHhccc---hhhH
Confidence 33344 567777788999999999999999999999999 9999999 9999999999999999 9999
Q ss_pred HHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccc
Q 004887 155 KLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDL 213 (725)
Q Consensus 155 klLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~ 213 (725)
++|+..||.+|.+|..|+||||+|..-| ..++..+|+++||+++..|+.| |+..
T Consensus 156 e~Li~~~a~~n~qDk~G~TpL~~al~e~----~~d~a~lLV~~gAd~~~edke~-t~~~ 209 (226)
T KOG4412|consen 156 EYLISQGAPLNTQDKYGFTPLHHALAEG----HPDVAVLLVRAGADTDREDKEG-TALR 209 (226)
T ss_pred HHHHhcCCCCCcccccCccHHHHHHhcc----CchHHHHHHHhccceeeccccC-chHH
Confidence 9999999999999999999999997654 5559999999999999999988 8753
No 8
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.94 E-value=1.1e-27 Score=270.24 Aligned_cols=316 Identities=19% Similarity=0.146 Sum_probs=223.4
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPP 73 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~ 73 (725)
.||++.+|.++.+|||+| .+.|+++|+|||..|. +|+||||+||..++.+... .+++..+.+
T Consensus 111 gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de--~~~TpLh~A~~~~~~E~~k-------~Li~~~a~~- 180 (929)
T KOG0510|consen 111 GADTPLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLEDE--NGFTPLHLAARKNKVEAKK-------ELINKGADP- 180 (929)
T ss_pred CCCCChhhhhccCchhhccccchHHHHHHHHHhcCCcccccc--CCCchhhHHHhcChHHHHH-------HHHhcCCCC-
Confidence 589999999999999999 7899999999999999 9999999999888777411 111112211
Q ss_pred CCCCccchhHHHHHH-------------------hhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCC--------
Q 004887 74 SKPSLQRNMIGLWYS-------------------FQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKAD-------- 126 (725)
Q Consensus 74 ~~~~~~~~~~~L~~a-------------------~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~Gad-------- 126 (725)
.+.+..+..++|.+ +..+++..+.+|.||||.|+..|++++++.+|+. |..
T Consensus 181 -~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n-~~~~a~~~~~~ 258 (929)
T KOG0510|consen 181 -CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQN-GKKIADVQLDA 258 (929)
T ss_pred -CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhC-ccccchhhhHH
Confidence 11122223333333 4445555558899999999999999999999988 432
Q ss_pred -------cccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHH-CC
Q 004887 127 -------VNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLK-NG 198 (725)
Q Consensus 127 -------VN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~-~G 198 (725)
||.. |++|.||||+||+.|+ .+.|+.|+..||+|+.+++++.||||.|+..|+++ .++-||+ .|
T Consensus 259 ~~q~kelv~~~-d~dg~tpLH~a~r~G~---~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~n----tv~rLL~~~~ 330 (929)
T KOG0510|consen 259 MQQEKELVNDE-DNDGCTPLHYAARQGG---PESVDNLLGFGASINSKNKDEESPLHFAAIYGRIN----TVERLLQESD 330 (929)
T ss_pred HHHHHHHhhcc-cccCCchHHHHHHcCC---hhHHHHHHHcCCcccccCCCCCCchHHHHHcccHH----HHHHHHhCcC
Confidence 3445 8899999999999999 99999999999999999999999999999987666 8888888 44
Q ss_pred -CCCCCcccccccccccccc-CCCCCCCC----CCCcc---ccccCCCCcccccccCCCcCccCCCCccccccccchhhh
Q 004887 199 -GSVSFDELQVSSVDLRSSS-SLSSSSDD----SSLSS---LTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIYASDEFR 269 (725)
Q Consensus 199 -advn~~d~~g~Tp~~~ass-~ls~s~~~----~~~~~---~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy~~Defr 269 (725)
..++..|..|.||+|.++. ++....+- ++... ..|.+|.||||+|+..|+..++..|..-+..|-..++--
T Consensus 331 ~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g 410 (929)
T KOG0510|consen 331 TRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKG 410 (929)
T ss_pred ccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccc
Confidence 6779999999999998876 33222221 33222 348999999999999999999998887777775555555
Q ss_pred hccccccccc--cccC--CCCCCCCCCCCCCcccCCCCccCccCcCCCCCcCC--CCCCCCC--------cccccCCccc
Q 004887 270 MYSFKIRPCS--RAYS--HDWTECPFAHPGENARRRDPRKFHYSCMPCPDHRK--GACSRGD--------MCEYAHGIFE 335 (725)
Q Consensus 270 m~~fkv~~Cs--r~~~--hd~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~~~--g~C~~Gd--------~C~yaH~~~E 335 (725)
+..|.+++|. .... .+...||+-+-.+ .-|+.+..--.-|-...+ ..|+... +-+.-|+..|
T Consensus 411 ~SA~~~~~~~~~p~~~~~~~~n~c~~~~~i~----~~pe~~e~vlD~c~l~~~e~~~~~~~~Q~~~~~~~~~mv~~~~~e 486 (929)
T KOG0510|consen 411 KSAFDTRPDRCLPVFVHRSPFNKCPTTELIE----PLPECFEIVLDFCILKSQERKDSPTPLQDEAAPILNIMVDKEQIE 486 (929)
T ss_pred cccccccccccccHHHhhCCCCCcchhhhhc----cchHHHHHHHHHHHHHHhhccCCCChhhhhhhhHHHHHhhhhHHH
Confidence 5555555444 2221 1233488777443 233333332223333222 1122111 1234579999
Q ss_pred cccCCc
Q 004887 336 SWLHPA 341 (725)
Q Consensus 336 ~~~hP~ 341 (725)
++.||.
T Consensus 487 LL~HPL 492 (929)
T KOG0510|consen 487 LLEHPL 492 (929)
T ss_pred HhcChh
Confidence 999995
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.94 E-value=1.6e-26 Score=245.43 Aligned_cols=192 Identities=15% Similarity=0.031 Sum_probs=149.3
Q ss_pred CCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCC
Q 004887 4 VPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSK 75 (725)
Q Consensus 4 dpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~ 75 (725)
+.+..|.+|+||||+| +++|+++|++++..+ |+||||+|+..++.+++
T Consensus 22 ~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d----~~TpLh~Aa~~g~~eiV-------------------- 77 (284)
T PHA02791 22 DAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE----NEFPLHQAATLEDTKIV-------------------- 77 (284)
T ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC----CCCHHHHHHHCCCHHHH--------------------
Confidence 3467899999999999 789999999998765 48999999976554443
Q ss_pred CCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCc-hHHHHHHhCCCCCHHHHH
Q 004887 76 PSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKS-TALHCAASGGSVNAVDVV 154 (725)
Q Consensus 76 ~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~-TpLH~Aa~~G~~~~~eiV 154 (725)
.+++..+.+.+..+..|+||||+|+..|+.+++++|+++ |+++|.+ +..|+ ||||+|+..|+ .++|
T Consensus 78 --------~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~-gadin~~-~~~g~~TpL~~Aa~~g~---~eiv 144 (284)
T PHA02791 78 --------KILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFY-GKTGWKTSFYHAVMLND---VSIV 144 (284)
T ss_pred --------HHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCcc-CCCCCcHHHHHHHHcCC---HHHH
Confidence 344444555566677899999999999999999999998 9999888 77774 89999999998 9999
Q ss_pred HHHHHCCCCCCCcC-CCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccc
Q 004887 155 KLLLFAGADSNLTD-AHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTC 233 (725)
Q Consensus 155 klLL~~GADin~~D-~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~ 233 (725)
++||+.|++. .| ..|.||||+|+..|+. +++++||++|++++.+|
T Consensus 145 k~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~----eiv~lLL~~gAd~n~~d---------------------------- 190 (284)
T PHA02791 145 SYFLSEIPST--FDLAILLSCIHITIKNGHV----DMMILLLDYMTSTNTNN---------------------------- 190 (284)
T ss_pred HHHHhcCCcc--cccccCccHHHHHHHcCCH----HHHHHHHHCCCCCCccc----------------------------
Confidence 9999887653 23 2588999999997554 49999999999988544
Q ss_pred cCCCCc-ccccccCCCcCccCCCCccccccccch
Q 004887 234 KSDDVH-AFVAPEKKEYPIDPSLPDIKDSIYASD 266 (725)
Q Consensus 234 ~~G~Tp-L~~A~e~g~~~vd~~Lpdi~~~iy~~D 266 (725)
..|.|| ||+|++.|+.+++..|.+.+..++..|
T Consensus 191 ~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~ 224 (284)
T PHA02791 191 SLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVN 224 (284)
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCc
Confidence 444454 777888888777777777666666554
No 10
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.94 E-value=5.4e-27 Score=277.64 Aligned_cols=247 Identities=18% Similarity=0.116 Sum_probs=195.4
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCch--------------
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSE-------------- 59 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~-------------- 59 (725)
.||+|..|..|.||||+| +++|+++|+|++..+. +|.||||+|+..++.++.....
T Consensus 168 Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~--~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~ 245 (682)
T PHA02876 168 GADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIAL--DDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLL 245 (682)
T ss_pred CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCC--CCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHH
Confidence 589999999999999999 8899999999999998 9999999999998876632211
Q ss_pred --------hhhhcccCCCCCCCCCCCccchhHHHHHHhhCCch---------------hhhcCCChHHHHHHHcC-CHHH
Q 004887 60 --------KLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSK---------------KIVLQHRTPLMVAAEYG-SVDV 115 (725)
Q Consensus 60 --------~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~---------------~~~~~G~TPLh~Aa~~G-~~ei 115 (725)
+....++..++.. ...+..+.++|++++..+.. ..+..|.||||+|+..| ..++
T Consensus 246 ~ai~~~~~~~~~~Ll~~g~~v--n~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~ 323 (682)
T PHA02876 246 KAIRNEDLETSLLLYDAGFSV--NSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTEN 323 (682)
T ss_pred HHHHcCCHHHHHHHHHCCCCC--CCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHH
Confidence 1111222222221 12234566777777765542 23467999999999999 5899
Q ss_pred HHHHHhcCCCCcccccCCCCchHHHHHHhCC-CCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHH
Q 004887 116 VKLILSLTKADVNLTCGLDKSTALHCAASGG-SVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDL 194 (725)
Q Consensus 116 Vk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G-~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelL 194 (725)
+++|+.. |+++|.. +..|.||||+|+..+ . .+++++|++.|++++.+|..|+||||+|+..|+ .+++++|
T Consensus 324 v~~Ll~~-gadin~~-d~~g~TpLh~A~~~~~~---~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~----~~iv~~L 394 (682)
T PHA02876 324 IRTLIML-GADVNAA-DRLYITPLHQASTLDRN---KDIVITLLELGANVNARDYCDKTPIHYAAVRNN----VVIINTL 394 (682)
T ss_pred HHHHHHc-CCCCCCc-ccCCCcHHHHHHHhCCc---HHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCC----HHHHHHH
Confidence 9999998 9999998 899999999999854 5 899999999999999999999999999999754 5599999
Q ss_pred HHCCCCCCCcccccccccccccc-CCC-----CCCCCCCCccccccCCCCcccccccCC-CcCccCCCCccccc
Q 004887 195 LKNGGSVSFDELQVSSVDLRSSS-SLS-----SSSDDSSLSSLTCKSDDVHAFVAPEKK-EYPIDPSLPDIKDS 261 (725)
Q Consensus 195 L~~Gadvn~~d~~g~Tp~~~ass-~ls-----~s~~~~~~~~~~~~~G~TpL~~A~e~g-~~~vd~~Lpdi~~~ 261 (725)
+++|++++..+..|.||++.+.. ... ...+.+.+++.++..|.||||+|++.+ +.+++..|.+.+..
T Consensus 395 l~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad 468 (682)
T PHA02876 395 LDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGAD 468 (682)
T ss_pred HHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCC
Confidence 99999999999999999998765 221 123347789999999999999999876 56777766654433
No 11
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.94 E-value=2.1e-26 Score=269.66 Aligned_cols=239 Identities=15% Similarity=0.025 Sum_probs=169.5
Q ss_pred HHHHHHCC-CCccCc-CCCCCCChHHHHHHHcC--Chhh------hcCchh----hhhcccCCCCCCCCCCCccchhHHH
Q 004887 20 ISIFQKHT-QNVFLV-DFAINDRTLLILLFFQN--YLIM------CGGSEK----LSSKALAPSASPPSKPSLQRNMIGL 85 (725)
Q Consensus 20 vklLL~~G-ADVN~~-D~D~~G~TpLHlAa~~g--~~ei------~ga~~~----l~~~lL~~aa~~~~~~~~~~~~~~L 85 (725)
+++|+++| +|+|.+ |. .|+||||+|+... +.++ .|++.+ .+.++|+.++.. .....+.+.+
T Consensus 158 Vk~LLe~G~ADIN~~~d~--~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~---g~~~~eIVkl 232 (764)
T PHA02716 158 IKYMVDVGIVNLNYVCKK--TGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLIT---GNVCASVIKK 232 (764)
T ss_pred HHHHHHCCCCCcccccCC--CCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHc---CCCCHHHHHH
Confidence 99999999 999999 66 9999999987542 2233 222221 122333333210 0001133444
Q ss_pred HHHhhCCchhhhcCCChHHHHH-------------------------------------HHcCCHHHHHHHHhcCCCCcc
Q 004887 86 WYSFQRLSKKIVLQHRTPLMVA-------------------------------------AEYGSVDVVKLILSLTKADVN 128 (725)
Q Consensus 86 ~~a~~~g~~~~~~~G~TPLh~A-------------------------------------a~~G~~eiVk~LLe~~GadVN 128 (725)
++..+++++..+..|.||||+| +..|+.+++++||+. |+++|
T Consensus 233 LLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~-GAdIN 311 (764)
T PHA02716 233 IIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQP-GVKLH 311 (764)
T ss_pred HHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhC-CCcee
Confidence 4444444455557899999975 445889999999999 99999
Q ss_pred cccCCCCchHHHHHHh--CCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCC----------CCCCHHHHHHHHHH
Q 004887 129 LTCGLDKSTALHCAAS--GGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHP----------NVPDSRVSLEDLLK 196 (725)
Q Consensus 129 ~~~d~~G~TpLH~Aa~--~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g----------~~e~~~~ivelLL~ 196 (725)
.+ |..|+||||+|+. .++ .++|++|++.|+|++.+|..|+||||+|+... ...+..+++++|++
T Consensus 312 ~k-D~~G~TPLH~Aaa~~~~~---~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~ 387 (764)
T PHA02716 312 YK-DSAGRTCLHQYILRHNIS---TDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLIS 387 (764)
T ss_pred cc-CCCCCCHHHHHHHHhCCC---chHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHH
Confidence 99 9999999999875 456 89999999999999999999999999987520 01246789999999
Q ss_pred CCCCCCCcccccccccccc---c-cCC---------C----------------------C-----------------C--
Q 004887 197 NGGSVSFDELQVSSVDLRS---S-SSL---------S----------------------S-----------------S-- 222 (725)
Q Consensus 197 ~Gadvn~~d~~g~Tp~~~a---s-s~l---------s----------------------~-----------------s-- 222 (725)
+|++++.+|..|.||++.+ . ... + . .
T Consensus 388 ~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~ 467 (764)
T PHA02716 388 LGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDE 467 (764)
T ss_pred CCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhh
Confidence 9999999999999999721 0 000 0 0 0
Q ss_pred ----------------CCCCCCccccccCCCCcccccccCCCcCcc-----CCCCccccccccchhh
Q 004887 223 ----------------SDDSSLSSLTCKSDDVHAFVAPEKKEYPID-----PSLPDIKDSIYASDEF 268 (725)
Q Consensus 223 ----------------~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd-----~~Lpdi~~~iy~~Def 268 (725)
......++..+..|.||||+|+..|+..++ ..|...+..+...|..
T Consensus 468 ~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~ 534 (764)
T PHA02716 468 YEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKN 534 (764)
T ss_pred hhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCC
Confidence 000123466788999999999999988765 7777777666665543
No 12
>PHA02946 ankyin-like protein; Provisional
Probab=99.94 E-value=1.1e-26 Score=261.74 Aligned_cols=235 Identities=15% Similarity=0.120 Sum_probs=131.5
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCC--hhh------hcCchh-----
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNY--LIM------CGGSEK----- 60 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~--~ei------~ga~~~----- 60 (725)
.||+|..|.+|+||||+| +++|+++|+|+|.+|. +|+||||+|+..+. .++ .|++.+
T Consensus 62 Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~--~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~ 139 (446)
T PHA02946 62 GYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDK--QHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDE 139 (446)
T ss_pred cCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCC--CCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCC
Confidence 578999999999999998 7889999999999888 99999999885432 111 122111
Q ss_pred hhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcC--CHHHHHHHHhcCCCCcccccCCCCchH
Q 004887 61 LSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYG--SVDVVKLILSLTKADVNLTCGLDKSTA 138 (725)
Q Consensus 61 l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G--~~eiVk~LLe~~GadVN~~~d~~G~Tp 138 (725)
.+.++++.+. .+....+.+++..+.+.+..+..|+||||+|+..+ +.+++++|++. |+++|.+ |.+|.||
T Consensus 140 ~g~tpL~aa~------~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~-Gadin~~-d~~G~Tp 211 (446)
T PHA02946 140 EGCGPLLACT------DPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKL-GISPSKP-DHDGNTP 211 (446)
T ss_pred CCCcHHHHHH------CCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHc-CCCCccc-CCCCCCH
Confidence 0111111111 11223333344444444444556666666655533 34566666666 6666666 5666666
Q ss_pred HHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccC
Q 004887 139 LHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSS 218 (725)
Q Consensus 139 LH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ 218 (725)
||+|+..|. +..+++++|+. |+|+|.+|..|.||||+|+..++ ..+++++|+.+|++++.. |. +.+...
T Consensus 212 LH~Aa~~~~-~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~---~~~~~~~Ll~~g~~~~~~-----~~-~~a~~~ 280 (446)
T PHA02946 212 LHIVCSKTV-KNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLS---PAHLINKLLSTSNVITDQ-----TV-NICIFY 280 (446)
T ss_pred HHHHHHcCC-CcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCC---hHHHHHHHHhCCCCCCCc-----HH-HHHHHc
Confidence 666665541 01566666653 56666666666666666665422 134566666666544321 10 000000
Q ss_pred CCCCCCCCCCcccc-ccCCCCcccccccCCCcCccCCCCccc
Q 004887 219 LSSSSDDSSLSSLT-CKSDDVHAFVAPEKKEYPIDPSLPDIK 259 (725)
Q Consensus 219 ls~s~~~~~~~~~~-~~~G~TpL~~A~e~g~~~vd~~Lpdi~ 259 (725)
......+ .++.+ ...|.||||+|+++|+.+++..|.+.+
T Consensus 281 ~~~~~~e--~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~ 320 (446)
T PHA02946 281 DRDDVLE--IINDKGKQYDSTDFKMAVEVGSIRCVKYLLDND 320 (446)
T ss_pred CchHHHH--HHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 0000000 01111 134679999999999999988887653
No 13
>PHA03095 ankyrin-like protein; Provisional
Probab=99.93 E-value=3.1e-26 Score=258.63 Aligned_cols=200 Identities=19% Similarity=0.120 Sum_probs=159.8
Q ss_pred ccCCccCCCCCCcHHHHH---------HHHHHHCCCCccCcCCCCCCChHHHHHHHc--CChhhhcCchhhhhcccCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS---------ISIFQKHTQNVFLVDFAINDRTLLILLFFQ--NYLIMCGGSEKLSSKALAPSA 70 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA---------vklLL~~GADVN~~D~D~~G~TpLHlAa~~--g~~ei~ga~~~l~~~lL~~aa 70 (725)
.||+|..|..|.||||+| +++|+++|+++|.+|. .|+||||+|+.. ++.++ ...++..++
T Consensus 73 Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~--~g~tpLh~a~~~~~~~~~i-------v~~Ll~~ga 143 (471)
T PHA03095 73 GADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDK--VGRTPLHVYLSGFNINPKV-------IRLLLRKGA 143 (471)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCC--CCCCHHHHHhhCCcCCHHH-------HHHHHHcCC
Confidence 589999999999999999 7899999999999998 999999999943 33333 222222222
Q ss_pred CCCCCC--------------CccchhHHHHHHhhCCchhhhcCCChHHHHHHHc--CCHHHHHHHHhcCCCCcccccCCC
Q 004887 71 SPPSKP--------------SLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEY--GSVDVVKLILSLTKADVNLTCGLD 134 (725)
Q Consensus 71 ~~~~~~--------------~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~--G~~eiVk~LLe~~GadVN~~~d~~ 134 (725)
...... ......+.+++..+.+....+..|.||||+|+.. ++.+++++|++. |++++.+ |..
T Consensus 144 d~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~-g~~~~~~-d~~ 221 (471)
T PHA03095 144 DVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRA-GCDPAAT-DML 221 (471)
T ss_pred CCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHc-CCCCccc-CCC
Confidence 211100 1123344444444555555567899999999975 788999999999 9999999 999
Q ss_pred CchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccc
Q 004887 135 KSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLR 214 (725)
Q Consensus 135 G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ 214 (725)
|+||||+|+..|+. ...+++.|++.|+++|.+|..|+||||+|+..|+ .+++++|+++|++++.+|..|.||.+.
T Consensus 222 g~tpLh~Aa~~~~~-~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~----~~~v~~LL~~gad~n~~~~~g~tpl~~ 296 (471)
T PHA03095 222 GNTPLHSMATGSSC-KRSLVLPLLIAGISINARNRYGQTPLHYAAVFNN----PRACRRLIALGADINAVSSDGNTPLSL 296 (471)
T ss_pred CCCHHHHHHhcCCc-hHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 99999999999872 1468999999999999999999999999999754 459999999999999999999999887
Q ss_pred ccc
Q 004887 215 SSS 217 (725)
Q Consensus 215 ass 217 (725)
+..
T Consensus 297 A~~ 299 (471)
T PHA03095 297 MVR 299 (471)
T ss_pred HHH
Confidence 654
No 14
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.93 E-value=2.1e-26 Score=260.78 Aligned_cols=247 Identities=18% Similarity=0.138 Sum_probs=197.8
Q ss_pred CccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHH-----HHHcCChhhhc------Cchh----h
Q 004887 5 PAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLIL-----LFFQNYLIMCG------GSEK----L 61 (725)
Q Consensus 5 pdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHl-----Aa~~g~~ei~g------a~~~----l 61 (725)
.+..+.++.||||+| +++|+++|++++..+. .|.||||+ |+..++.+++. ++.+ .
T Consensus 28 ~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~--~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~ 105 (480)
T PHA03100 28 NDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTK--NNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNN 105 (480)
T ss_pred chhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccc--cCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCC
Confidence 456677899999999 8899999999999987 89999999 99888777632 2211 1
Q ss_pred hhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcC--CHHHHHHHHhcCCCCcccccCCCCchHH
Q 004887 62 SSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYG--SVDVVKLILSLTKADVNLTCGLDKSTAL 139 (725)
Q Consensus 62 ~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G--~~eiVk~LLe~~GadVN~~~d~~G~TpL 139 (725)
+.++++.++. ...+..+.+.+++..+.+.+..+..|.||||+|+..| +.+++++|+++ |+++|.+ +..|.|||
T Consensus 106 g~tpL~~A~~---~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~-g~din~~-d~~g~tpL 180 (480)
T PHA03100 106 GITPLLYAIS---KKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK-GVDINAK-NRYGYTPL 180 (480)
T ss_pred CCchhhHHHh---cccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHC-CCCcccc-cCCCCCHH
Confidence 2223333320 0233444555555555555556688999999999999 99999999999 9999999 88999999
Q ss_pred HHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCC------CcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccc
Q 004887 140 HCAASGGSVNAVDVVKLLLFAGADSNLTDAHG------NRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDL 213 (725)
Q Consensus 140 H~Aa~~G~~~~~eiVklLL~~GADin~~D~~G------~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~ 213 (725)
|+|+..|+ .+++++|+++|++++..+..| .||||+|+..++ ...+++++|+++|++++.+|..|.||++
T Consensus 181 ~~A~~~~~---~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~iv~~Ll~~g~din~~d~~g~TpL~ 255 (480)
T PHA03100 181 HIAVEKGN---IDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNE--ITLEVVNYLLSYGVPINIKDVYGFTPLH 255 (480)
T ss_pred HHHHHhCC---HHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCc--CcHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 99999999 999999999999999999999 999999999755 1156999999999999999999999999
Q ss_pred ccccCCCCC-----CCCCCCccccccCCCCcccccccCCCcCccCCCCccccccc
Q 004887 214 RSSSSLSSS-----SDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIY 263 (725)
Q Consensus 214 ~ass~ls~s-----~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy 263 (725)
.+....... .+.+.+++..+..|.|||++|++.++.+++..|.+.+..+.
T Consensus 256 ~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~ 310 (480)
T PHA03100 256 YAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK 310 (480)
T ss_pred HHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence 877632222 33477999999999999999999999999887776554443
No 15
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.93 E-value=7.1e-26 Score=258.52 Aligned_cols=234 Identities=15% Similarity=0.092 Sum_probs=171.7
Q ss_pred ccCCccCCCCCCcHHHHH----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSAS 71 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~ 71 (725)
+||+|.. .+|.||||++ +++|+++|||||.++ .+.||||.|+.++....
T Consensus 26 GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~---~~~tpL~~a~~~~~~~~----------------- 84 (494)
T PHA02989 26 GFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG---YIETPLCAVLRNREITS----------------- 84 (494)
T ss_pred CCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC---CCCCcHHHHHhccCcch-----------------
Confidence 6899988 6799999764 889999999999887 57999999885543211
Q ss_pred CCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHc---CCHHHHHHHHhcCCCCc-ccccCCCCchHHHHHHhC--
Q 004887 72 PPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEY---GSVDVVKLILSLTKADV-NLTCGLDKSTALHCAASG-- 145 (725)
Q Consensus 72 ~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~---G~~eiVk~LLe~~GadV-N~~~d~~G~TpLH~Aa~~-- 145 (725)
.+..+.+.+++..+.+.+..+..|.||||.|+.. |+.++|++||++ |+|+ +.+ +..|.||||+|+..
T Consensus 85 -----~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~-Gadin~~~-d~~g~tpLh~a~~~~~ 157 (494)
T PHA02989 85 -----NKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSK-GINVNDVK-NSRGYNLLHMYLESFS 157 (494)
T ss_pred -----hhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHC-CCCccccc-CCCCCCHHHHHHHhcc
Confidence 1123445566677777777778888888887755 578888888888 8888 666 78888888888764
Q ss_pred CCCCHHHHHHHHHHCCCCCCC-cCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCC---C
Q 004887 146 GSVNAVDVVKLLLFAGADSNL-TDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLS---S 221 (725)
Q Consensus 146 G~~~~~eiVklLL~~GADin~-~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls---~ 221 (725)
++ .++|++|+++|+|++. .|..|.||||+|+..+...+..+++++|+++|++++.+|..+.|+.+.+..... .
T Consensus 158 ~~---~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~ 234 (494)
T PHA02989 158 VK---KDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSK 234 (494)
T ss_pred CC---HHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcc
Confidence 45 7888888888888887 577888888888776533456678888888888888888777777654322100 0
Q ss_pred C-------CCCCCCccccccCCCCcccccccCCCcCccCCCCccccccccch
Q 004887 222 S-------SDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIYASD 266 (725)
Q Consensus 222 s-------~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy~~D 266 (725)
. .....+++.+|..|.||||+|++.++.+++..|.+.+.++...|
T Consensus 235 ~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d 286 (494)
T PHA02989 235 KEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVS 286 (494)
T ss_pred cchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccC
Confidence 0 11245677888888888888888888888877776665555444
No 16
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.93 E-value=1.6e-25 Score=249.29 Aligned_cols=126 Identities=21% Similarity=0.262 Sum_probs=102.6
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDV 177 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhl 177 (725)
.+|.||||+|+..|+.+++++|+++ |+|++.+ +.+|.||||+|+..|+ .++|++|+++|++++.+|..|.||||+
T Consensus 100 ~~g~tpL~~A~~~~~~~iv~~Ll~~-gad~~~~-~~~g~tpLh~A~~~~~---~~~v~~Ll~~g~~~~~~d~~g~TpL~~ 174 (413)
T PHA02875 100 KDGMTPLHLATILKKLDIMKLLIAR-GADPDIP-NTDKFSPLHLAVMMGD---IKGIELLIDHKACLDIEDCCGCTPLII 174 (413)
T ss_pred CCCCCHHHHHHHhCCHHHHHHHHhC-CCCCCCC-CCCCCCHHHHHHHcCC---HHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence 4688999999999999999999998 9999988 8889999999999998 899999999999999999999999999
Q ss_pred HHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCCc
Q 004887 178 IVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPD 257 (725)
Q Consensus 178 A~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpd 257 (725)
|+..|+. +++++|+++|++++..+..|. .||+|+|++.++.+++..|.+
T Consensus 175 A~~~g~~----eiv~~Ll~~ga~~n~~~~~~~---------------------------~t~l~~A~~~~~~~iv~~Ll~ 223 (413)
T PHA02875 175 AMAKGDI----AICKMLLDSGANIDYFGKNGC---------------------------VAALCYAIENNKIDIVRLFIK 223 (413)
T ss_pred HHHcCCH----HHHHHHHhCCCCCCcCCCCCC---------------------------chHHHHHHHcCCHHHHHHHHH
Confidence 9987554 489999999998885443322 366777777777777666654
Q ss_pred cc
Q 004887 258 IK 259 (725)
Q Consensus 258 i~ 259 (725)
.+
T Consensus 224 ~g 225 (413)
T PHA02875 224 RG 225 (413)
T ss_pred CC
Confidence 43
No 17
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.92 E-value=3.1e-25 Score=249.10 Aligned_cols=211 Identities=18% Similarity=0.143 Sum_probs=173.6
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCC-----------------------CCccCcCCCCCCChHHHHHHHcC
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHT-----------------------QNVFLVDFAINDRTLLILLFFQN 50 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~G-----------------------ADVN~~D~D~~G~TpLHlAa~~g 50 (725)
.||+|..+..|.||||+| +++|+++| +|++.++. .|.||||+|+..+
T Consensus 58 Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~--~g~T~Lh~A~~~~ 135 (434)
T PHA02874 58 GADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDA--ELKTFLHYAIKKG 135 (434)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCC--CCccHHHHHHHCC
Confidence 589999999999999999 56666554 56777777 9999999999765
Q ss_pred ChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccc
Q 004887 51 YLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLT 130 (725)
Q Consensus 51 ~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~ 130 (725)
+.+++ .+++..+.+.+..+..|.||||+|+..|+.+++++|+++ |++++..
T Consensus 136 ~~~~v----------------------------~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~-g~~~n~~ 186 (434)
T PHA02874 136 DLESI----------------------------KMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEK-GAYANVK 186 (434)
T ss_pred CHHHH----------------------------HHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-CCCCCCC
Confidence 54442 244444555566678899999999999999999999999 9999998
Q ss_pred cCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccc
Q 004887 131 CGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSS 210 (725)
Q Consensus 131 ~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~T 210 (725)
+..|.||||+|+..|+ .++|++|++.|++++.++..|.||||+|+..+ ..++++|+ .|++++.+|..|.|
T Consensus 187 -~~~g~tpL~~A~~~g~---~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~-----~~~i~~Ll-~~~~in~~d~~G~T 256 (434)
T PHA02874 187 -DNNGESPLHNAAEYGD---YACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN-----RSAIELLI-NNASINDQDIDGST 256 (434)
T ss_pred -CCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCC-----hHHHHHHH-cCCCCCCcCCCCCC
Confidence 8999999999999999 99999999999999999999999999999853 24666666 68999999999999
Q ss_pred ccccccc-CCCCC-----CCCCCCccccccCCCCcccccccCC-CcCccC
Q 004887 211 VDLRSSS-SLSSS-----SDDSSLSSLTCKSDDVHAFVAPEKK-EYPIDP 253 (725)
Q Consensus 211 p~~~ass-~ls~s-----~~~~~~~~~~~~~G~TpL~~A~e~g-~~~vd~ 253 (725)
|++.+.. ..... ...+.+++.++..|.||||+|++.+ +.++..
T Consensus 257 pLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik 306 (434)
T PHA02874 257 PLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIK 306 (434)
T ss_pred HHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHH
Confidence 9998765 22211 2337889999999999999998876 444543
No 18
>PHA02946 ankyin-like protein; Provisional
Probab=99.92 E-value=1.1e-24 Score=245.57 Aligned_cols=210 Identities=14% Similarity=0.064 Sum_probs=173.0
Q ss_pred CCcHHHHH----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccch
Q 004887 12 KSSPLKIS----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRN 81 (725)
Q Consensus 12 G~TPLhiA----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~ 81 (725)
+.++||++ +++|+++|+++|.+|. +|+||||+|+..++.++
T Consensus 37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~--~G~TpLh~Aa~~g~~ei--------------------------- 87 (446)
T PHA02946 37 NYHILHAYCGIKGLDERFVEELLHRGYSPNETDD--DGNYPLHIASKINNNRI--------------------------- 87 (446)
T ss_pred CChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCC--CCCCHHHHHHHcCCHHH---------------------------
Confidence 47999986 8899999999999998 99999999997766544
Q ss_pred hHHHHHHhhCCchhhhcCCChHHHHHHHcCC--HHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHH
Q 004887 82 MIGLWYSFQRLSKKIVLQHRTPLMVAAEYGS--VDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLF 159 (725)
Q Consensus 82 ~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~--~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~ 159 (725)
+.+++..+.+++..+..|+||||+|+..++ .+++++|+++ |+++|...+.+|.|||| ||..|+ .+++++|++
T Consensus 88 -v~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~-Gadin~~~d~~g~tpL~-aa~~~~---~~vv~~Ll~ 161 (446)
T PHA02946 88 -VAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQY-GAKINNSVDEEGCGPLL-ACTDPS---ERVFKKIMS 161 (446)
T ss_pred -HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCcccccCCCCCcHHH-HHHCCC---hHHHHHHHh
Confidence 335556666777788899999999998764 7999999999 99999644889999998 666678 899999999
Q ss_pred CCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCC-CC-C----CCCCCCccccc
Q 004887 160 AGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSL-SS-S----SDDSSLSSLTC 233 (725)
Q Consensus 160 ~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~l-s~-s----~~~~~~~~~~~ 233 (725)
.|++++.+|..|+||||+|+..++ ...+++++|+++|++++.+|..|.||++.+.... .. . ...+.+++.+|
T Consensus 162 ~gad~~~~d~~G~t~Lh~A~~~~~--~~~~~v~~Ll~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~gadin~~d 239 (446)
T PHA02946 162 IGFEARIVDKFGKNHIHRHLMSDN--PKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDVNKQN 239 (446)
T ss_pred ccccccccCCCCCCHHHHHHHhcC--CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHcCCCCCCCC
Confidence 999999999999999999987543 3356899999999999999999999999887622 11 1 12367899999
Q ss_pred cCCCCcccccccCCCc-CccCCCCcc
Q 004887 234 KSDDVHAFVAPEKKEY-PIDPSLPDI 258 (725)
Q Consensus 234 ~~G~TpL~~A~e~g~~-~vd~~Lpdi 258 (725)
..|.||||+|++.++. ++...|+..
T Consensus 240 ~~G~TpLh~A~~~~~~~~~~~~Ll~~ 265 (446)
T PHA02946 240 KFGDSPLTLLIKTLSPAHLINKLLST 265 (446)
T ss_pred CCCCCHHHHHHHhCChHHHHHHHHhC
Confidence 9999999999998774 555445443
No 19
>PHA02791 ankyrin-like protein; Provisional
Probab=99.91 E-value=4.7e-24 Score=226.54 Aligned_cols=163 Identities=17% Similarity=0.081 Sum_probs=135.7
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPP 73 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~ 73 (725)
.|+++.. +|+||||+| +++|+++|++++.+|. .|+||||+|+..++.++.
T Consensus 53 ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~--~G~TpLh~Aa~~g~~eiv------------------ 110 (284)
T PHA02791 53 GALKNLL--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDD--KGNTALYYAVDSGNMQTV------------------ 110 (284)
T ss_pred cCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcCCHHHH------------------
Confidence 3566665 479999999 8899999999999998 999999999987665553
Q ss_pred CCCCccchhHHHHHHhhCCchhhhcCC-ChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHH
Q 004887 74 SKPSLQRNMIGLWYSFQRLSKKIVLQH-RTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVD 152 (725)
Q Consensus 74 ~~~~~~~~~~~L~~a~~~g~~~~~~~G-~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~e 152 (725)
.+++..+.+.+..+..| .||||+|+..|+.++|++||++ +.+... ...|.||||+|+..|+ .+
T Consensus 111 ----------k~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~-~~~~~d--~~~g~TpLh~Aa~~g~---~e 174 (284)
T PHA02791 111 ----------KLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE-IPSTFD--LAILLSCIHITIKNGH---VD 174 (284)
T ss_pred ----------HHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhc-CCcccc--cccCccHHHHHHHcCC---HH
Confidence 24444444555555666 4899999999999999999998 654321 2358999999999999 99
Q ss_pred HHHHHHHCCCCCCCcCCCCCcH-HHHHHhCCCCCCHHHHHHHHHHCCCCCCCccc
Q 004887 153 VVKLLLFAGADSNLTDAHGNRP-FDVIVVHPNVPDSRVSLEDLLKNGGSVSFDEL 206 (725)
Q Consensus 153 iVklLL~~GADin~~D~~G~TP-LhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~ 206 (725)
+|++||++|||++.+|..|.|| ||+|+..|+. +++++|+++|++++.+|.
T Consensus 175 iv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~----e~v~lLl~~Ga~in~~~~ 225 (284)
T PHA02791 175 MMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDL----EMLQALFKYDINIYSVNL 225 (284)
T ss_pred HHHHHHHCCCCCCcccCCCCChHHHHHHHcCCH----HHHHHHHHCCCCCccCcc
Confidence 9999999999999999999987 9999998555 599999999999997665
No 20
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.91 E-value=1.9e-24 Score=246.79 Aligned_cols=228 Identities=14% Similarity=0.060 Sum_probs=182.1
Q ss_pred ccCCccCCCCCCcHHHHH--------------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccC
Q 004887 2 VAVPAVTMRNKSSPLKIS--------------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALA 67 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~ 67 (725)
+||+|..+ .+.||||+| +++|+++|||+|.+|. .|.||||.|+..+.
T Consensus 60 GAdvn~~~-~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~--~g~tpL~~a~~~~~---------------- 120 (494)
T PHA02989 60 GADVNYKG-YIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTF--NGVSPIVCFIYNSN---------------- 120 (494)
T ss_pred CCCccCCC-CCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCC--CCCcHHHHHHHhcc----------------
Confidence 58999887 679999987 6789999999999998 99999999884321
Q ss_pred CCCCCCCCCCccchhHHHHHHhhCCc-hhhhcCCChHHHHHHHc--CCHHHHHHHHhcCCCCcccccCCCCchHHHHHHh
Q 004887 68 PSASPPSKPSLQRNMIGLWYSFQRLS-KKIVLQHRTPLMVAAEY--GSVDVVKLILSLTKADVNLTCGLDKSTALHCAAS 144 (725)
Q Consensus 68 ~aa~~~~~~~~~~~~~~L~~a~~~g~-~~~~~~G~TPLh~Aa~~--G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~ 144 (725)
.+..+.+.+++..+.+. +..+..|+||||+|+.. ++.++|++||++ |+|++...+..|.||||+|+.
T Consensus 121 ---------~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~-Gadi~~~~~~~g~tpL~~a~~ 190 (494)
T PHA02989 121 ---------INNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSF-GVNLFEKTSLYGLTPMNIYLR 190 (494)
T ss_pred ---------cCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCccccccccCCChHHHHHh
Confidence 12345566777777777 66778999999998764 688999999999 999998437899999999987
Q ss_pred CCC-CCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCC--CCCHHHHHHHHHHCCCCCCCccccccccccccccCCCC
Q 004887 145 GGS-VNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPN--VPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSS 221 (725)
Q Consensus 145 ~G~-~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~--~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~ 221 (725)
.+. ....++|++|++.|++++.+|..|.|+||.++..+. .....+++++|++ |++++.+|..|.||++.+......
T Consensus 191 ~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~ 269 (494)
T PHA02989 191 NDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNY 269 (494)
T ss_pred cccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCH
Confidence 651 112899999999999999999999999998876432 1233567776665 699999999999999987652222
Q ss_pred -----CCCCCCCccccccCCCCcccccccCCCcCccCCCCccc
Q 004887 222 -----SSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIK 259 (725)
Q Consensus 222 -----s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~ 259 (725)
..+.+.+++.+++.|.||||+|++.++.+++..|.+.+
T Consensus 270 ~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~ 312 (494)
T PHA02989 270 EAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLK 312 (494)
T ss_pred HHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence 23448899999999999999999999999987666543
No 21
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.91 E-value=5.4e-24 Score=252.14 Aligned_cols=208 Identities=18% Similarity=0.150 Sum_probs=135.7
Q ss_pred ccCCccCCCCCCcHHHHH---------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCC-hhhhcCchhhhhcccCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS---------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNY-LIMCGGSEKLSSKALAPSAS 71 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA---------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~-~ei~ga~~~l~~~lL~~aa~ 71 (725)
.++++..|..|.||||+| +++|++.|++++.+|. +|+||||+|+..|+ .++
T Consensus 263 g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~--~g~TpLh~Aa~~g~~~~~----------------- 323 (682)
T PHA02876 263 GFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNI--KGETPLYLMAKNGYDTEN----------------- 323 (682)
T ss_pred CCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCC--CCCCHHHHHHHhCCCHHH-----------------
Confidence 367888888889999988 5678888999988887 88999999886653 221
Q ss_pred CCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHc-CCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCH
Q 004887 72 PPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEY-GSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNA 150 (725)
Q Consensus 72 ~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~-G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~ 150 (725)
+.+++..+.+.+..+..|.||||+|+.. ++.+++++|++. |+++|.+ |..|.||||+|+..|+
T Consensus 324 -----------v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~-gadin~~-d~~G~TpLh~Aa~~~~--- 387 (682)
T PHA02876 324 -----------IRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLEL-GANVNAR-DYCDKTPIHYAAVRNN--- 387 (682)
T ss_pred -----------HHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHc-CCCCccC-CCCCCCHHHHHHHcCC---
Confidence 2223333334444455666666666664 345666666666 6666666 6666666666666666
Q ss_pred HHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccccc-CCCCC-----CC
Q 004887 151 VDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSS-SLSSS-----SD 224 (725)
Q Consensus 151 ~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass-~ls~s-----~~ 224 (725)
.++|++|+++|++++..+..|.||||+|+..+ ....++++|+++|++++.+|..|.||++.+.. ..... .+
T Consensus 388 ~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~---~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~ 464 (682)
T PHA02876 388 VVIINTLLDYGADIEALSQKIGTALHFALCGT---NPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD 464 (682)
T ss_pred HHHHHHHHHCCCCccccCCCCCchHHHHHHcC---CHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHH
Confidence 66666666666666666666666666666542 23345666666666666666666666666544 21111 22
Q ss_pred CCCCccccccCCCCcccccccCC
Q 004887 225 DSSLSSLTCKSDDVHAFVAPEKK 247 (725)
Q Consensus 225 ~~~~~~~~~~~G~TpL~~A~e~g 247 (725)
.+.+++.++..|.|||++|++.+
T Consensus 465 ~Gad~n~~d~~g~tpl~~a~~~~ 487 (682)
T PHA02876 465 NGADVNAINIQNQYPLLIALEYH 487 (682)
T ss_pred CCCCCCCCCCCCCCHHHHHHHhC
Confidence 35566677888888888887644
No 22
>PHA02798 ankyrin-like protein; Provisional
Probab=99.91 E-value=2.5e-24 Score=245.58 Aligned_cols=227 Identities=16% Similarity=0.076 Sum_probs=142.4
Q ss_pred ccCCccCCCCCCcHHHHH-------------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCC
Q 004887 2 VAVPAVTMRNKSSPLKIS-------------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAP 68 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA-------------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~ 68 (725)
+||+|..|..|.||||+| +++|+++|+|+|.+|. +|+||||+|+..+..
T Consensus 61 Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~--~G~TpLh~a~~~~~~---------------- 122 (489)
T PHA02798 61 GANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNS--DGETPLYCLLSNGYI---------------- 122 (489)
T ss_pred CCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCC--CcCcHHHHHHHcCCc----------------
Confidence 466666677777777653 4566667777777666 677777766643211
Q ss_pred CCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCC---HHHHHHHHhcCCCCcccccCCCCchHHHHHHhC
Q 004887 69 SASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGS---VDVVKLILSLTKADVNLTCGLDKSTALHCAASG 145 (725)
Q Consensus 69 aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~---~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~ 145 (725)
...+.+.+++..+.+.+..+..|.||||+|+..|+ .+++++||++ |+|+|...+..|.||||+++..
T Consensus 123 ---------~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~-gadin~~~~~~~~t~Lh~~~~~ 192 (489)
T PHA02798 123 ---------NNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEK-GVDINTHNNKEKYDTLHCYFKY 192 (489)
T ss_pred ---------ChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHh-CCCcccccCcCCCcHHHHHHHh
Confidence 11233445555556666666777777777777776 7777777777 7777776445677777777653
Q ss_pred CC-CCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHH---hCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCC
Q 004887 146 GS-VNAVDVVKLLLFAGADSNLTDAHGNRPFDVIV---VHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSS 221 (725)
Q Consensus 146 G~-~~~~eiVklLL~~GADin~~D~~G~TPLhlA~---~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~ 221 (725)
+. ....+++++|+++|++++..|..|.|+++-.. .........+++++|+. ++|+|.+|..|.||++.+......
T Consensus 193 ~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~ 271 (489)
T PHA02798 193 NIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNR 271 (489)
T ss_pred ccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcH
Confidence 30 01167777777777777777777777665111 00011234556666554 477777788888888776552222
Q ss_pred C-----CCCCCCccccccCCCCcccccccCCCcCccCCCCc
Q 004887 222 S-----SDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPD 257 (725)
Q Consensus 222 s-----~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpd 257 (725)
. .+.+++++.++..|.||||+|+++++..++..|.+
T Consensus 272 ~~v~~LL~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~ 312 (489)
T PHA02798 272 KIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILN 312 (489)
T ss_pred HHHHHHHHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHc
Confidence 1 23377788888888888888888888777655443
No 23
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.90 E-value=9.6e-24 Score=235.08 Aligned_cols=185 Identities=18% Similarity=0.115 Sum_probs=156.0
Q ss_pred CCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchh
Q 004887 11 NKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNM 82 (725)
Q Consensus 11 ~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~ 82 (725)
+.+++||.| +++|+++|+|+|..+. +|.||||+|+..++.++..
T Consensus 1 ~~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~--~g~tpL~~A~~~~~~~~v~-------------------------- 52 (413)
T PHA02875 1 MDQVALCDAILFGELDIARRLLDIGINPNFEIY--DGISPIKLAMKFRDSEAIK-------------------------- 52 (413)
T ss_pred CCchHHHHHHHhCCHHHHHHHHHCCCCCCccCC--CCCCHHHHHHHcCCHHHHH--------------------------
Confidence 358999999 8899999999999987 9999999999776655432
Q ss_pred HHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCC
Q 004887 83 IGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGA 162 (725)
Q Consensus 83 ~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GA 162 (725)
+++..+...+..+.++.||||+|+..|+.++|++|++. |++++...+.+|.||||+|+..|+ .++|++|+++|+
T Consensus 53 --~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~g~tpL~~A~~~~~---~~iv~~Ll~~ga 126 (413)
T PHA02875 53 --LLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDL-GKFADDVFYKDGMTPLHLATILKK---LDIMKLLIARGA 126 (413)
T ss_pred --HHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHc-CCcccccccCCCCCHHHHHHHhCC---HHHHHHHHhCCC
Confidence 33333333344456789999999999999999999999 887765447789999999999999 999999999999
Q ss_pred CCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccc
Q 004887 163 DSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFV 242 (725)
Q Consensus 163 Din~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~ 242 (725)
|++.+|..|.||||+|+..|+ .+++++|+++|++++. ++..|.||||+
T Consensus 127 d~~~~~~~g~tpLh~A~~~~~----~~~v~~Ll~~g~~~~~----------------------------~d~~g~TpL~~ 174 (413)
T PHA02875 127 DPDIPNTDKFSPLHLAVMMGD----IKGIELLIDHKACLDI----------------------------EDCCGCTPLII 174 (413)
T ss_pred CCCCCCCCCCCHHHHHHHcCC----HHHHHHHHhcCCCCCC----------------------------CCCCCCCHHHH
Confidence 999999999999999999855 4599999999999874 56677899999
Q ss_pred cccCCCcCccCCCCccccc
Q 004887 243 APEKKEYPIDPSLPDIKDS 261 (725)
Q Consensus 243 A~e~g~~~vd~~Lpdi~~~ 261 (725)
|+..|+.+++..|.+.+..
T Consensus 175 A~~~g~~eiv~~Ll~~ga~ 193 (413)
T PHA02875 175 AMAKGDIAICKMLLDSGAN 193 (413)
T ss_pred HHHcCCHHHHHHHHhCCCC
Confidence 9999999998777655433
No 24
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.90 E-value=2.4e-23 Score=235.86 Aligned_cols=202 Identities=23% Similarity=0.186 Sum_probs=165.2
Q ss_pred ccCCccCCCCCCcHHHH-----H--------HHHHHHCCCCccCcCCCCCCChHHHHHH--HcCChhhhcCchhh-----
Q 004887 2 VAVPAVTMRNKSSPLKI-----S--------ISIFQKHTQNVFLVDFAINDRTLLILLF--FQNYLIMCGGSEKL----- 61 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhi-----A--------vklLL~~GADVN~~D~D~~G~TpLHlAa--~~g~~ei~ga~~~l----- 61 (725)
.||++..+.+|.||||+ | +++|+++|++++..|. .|.||||+|+ ..++.++.....+.
T Consensus 58 g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~--~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~ 135 (480)
T PHA03100 58 GADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDN--NGITPLLYAISKKSNSYSIVEYLLDNGANVN 135 (480)
T ss_pred CCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCC--CCCchhhHHHhcccChHHHHHHHHHcCCCCC
Confidence 58999999999999999 8 8899999999999998 9999999999 88877773322211
Q ss_pred -----hhcccCCCCCCCCCCCc--cchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCC
Q 004887 62 -----SSKALAPSASPPSKPSL--QRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLD 134 (725)
Q Consensus 62 -----~~~lL~~aa~~~~~~~~--~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~ 134 (725)
+.++++.++. .+ ....+.+++..+.+.+..+..|.||||+|+..|+.+++++|+++ |++++.. +..
T Consensus 136 ~~~~~g~t~L~~A~~-----~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~-ga~~~~~-~~~ 208 (480)
T PHA03100 136 IKNSDGENLLHLYLE-----SNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDN-GADINAG-DIE 208 (480)
T ss_pred ccCCCCCcHHHHHHH-----cCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHc-CCCccCC-CCC
Confidence 1222222221 11 33444444444555555567899999999999999999999999 9999998 788
Q ss_pred C------chHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccc
Q 004887 135 K------STALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQV 208 (725)
Q Consensus 135 G------~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g 208 (725)
| .||||+|+..|+ ...++|++|++.|++++.+|..|.||||+|+..|+ .+++++|+++|++++.+|..|
T Consensus 209 ~~~~~~~~t~l~~a~~~~~-~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~----~~iv~~Ll~~gad~n~~d~~g 283 (480)
T PHA03100 209 TLLFTIFETPLHIAACYNE-ITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNN----PEFVKYLLDLGANPNLVNKYG 283 (480)
T ss_pred CCcHHHHHhHHHHHHHhCc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCccCCCC
Confidence 8 899999999886 33799999999999999999999999999999855 559999999999999999999
Q ss_pred ccccccccc
Q 004887 209 SSVDLRSSS 217 (725)
Q Consensus 209 ~Tp~~~ass 217 (725)
.||.+.+..
T Consensus 284 ~tpl~~A~~ 292 (480)
T PHA03100 284 DTPLHIAIL 292 (480)
T ss_pred CcHHHHHHH
Confidence 999887654
No 25
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.90 E-value=4.4e-23 Score=234.48 Aligned_cols=199 Identities=16% Similarity=0.130 Sum_probs=160.3
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhc-----------------
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCG----------------- 56 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~g----------------- 56 (725)
.||+|..|.+|.||||+| ++.|++.+.+.+. . .+.++|+.|+..++.++..
T Consensus 60 gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~--~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~ 135 (477)
T PHA02878 60 GHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--F--YTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVY 135 (477)
T ss_pred CCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--c--cchhhHHHHHHcCCHHHHHHHHhCcccCcccCcHHH
Confidence 589999999999999999 6678887766555 2 5688999998888766510
Q ss_pred ---------CchhhhhcccCCCCCCCCCCCccc-hhHHHHHHhhCCchhh--------------hcCCChHHHHHHHcCC
Q 004887 57 ---------GSEKLSSKALAPSASPPSKPSLQR-NMIGLWYSFQRLSKKI--------------VLQHRTPLMVAAEYGS 112 (725)
Q Consensus 57 ---------a~~~l~~~lL~~aa~~~~~~~~~~-~~~~L~~a~~~g~~~~--------------~~~G~TPLh~Aa~~G~ 112 (725)
...++...++..++..+. .+.. +.++|++++..+..++ +..|.||||+|+..|+
T Consensus 136 ~~~~~~~~~~~~~iv~~Ll~~gadin~--~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~ 213 (477)
T PHA02878 136 IDKKSKDDIIEAEITKLLLSYGADINM--KDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYN 213 (477)
T ss_pred HhhccchhhHHHHHHHHHHHcCCCCCc--cCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCC
Confidence 012266666666654322 2223 6677777776655443 3689999999999999
Q ss_pred HHHHHHHHhcCCCCcccccCCCCchHHHHHHhC-CCCCHHHHHHHHHHCCCCCCCcCC-CCCcHHHHHHhCCCCCCHHHH
Q 004887 113 VDVVKLILSLTKADVNLTCGLDKSTALHCAASG-GSVNAVDVVKLLLFAGADSNLTDA-HGNRPFDVIVVHPNVPDSRVS 190 (725)
Q Consensus 113 ~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~-G~~~~~eiVklLL~~GADin~~D~-~G~TPLhlA~~~g~~e~~~~i 190 (725)
.+++++||+. |+++|.+ +..|.||||+|+.. ++ .+++++|+++|++++.++. .|.||||+|+ ...++
T Consensus 214 ~~iv~~Ll~~-ga~in~~-d~~g~TpLh~A~~~~~~---~~iv~~Ll~~gadvn~~~~~~g~TpLh~A~------~~~~~ 282 (477)
T PHA02878 214 KPIVHILLEN-GASTDAR-DKCGNTPLHISVGYCKD---YDILKLLLEHGVDVNAKSYILGLTALHSSI------KSERK 282 (477)
T ss_pred HHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHhcCC---HHHHHHHHHcCCCCCccCCCCCCCHHHHHc------cCHHH
Confidence 9999999999 9999999 99999999999975 67 9999999999999999986 7999999993 23569
Q ss_pred HHHHHHCCCCCCCcccccccccccccc
Q 004887 191 LEDLLKNGGSVSFDELQVSSVDLRSSS 217 (725)
Q Consensus 191 velLL~~Gadvn~~d~~g~Tp~~~ass 217 (725)
+++|+++|+|++..|..|.||.+.+..
T Consensus 283 v~~Ll~~gadin~~d~~g~TpL~~A~~ 309 (477)
T PHA02878 283 LKLLLEYGADINSLNSYKLTPLSSAVK 309 (477)
T ss_pred HHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 999999999999999999999987643
No 26
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.90 E-value=2e-23 Score=236.09 Aligned_cols=225 Identities=16% Similarity=0.092 Sum_probs=179.3
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCch--------------
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSE-------------- 59 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~-------------- 59 (725)
.||+|..|.+|.||||+| .++|++.|+|+-..|. +|.+|+|.|++.+..+...-..
T Consensus 144 ~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~--~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~ 221 (929)
T KOG0510|consen 144 GADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDI--DGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFD 221 (929)
T ss_pred cCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccC--cCCchHHHHHHhcchhhhhhhhccccchhhcccccc
Confidence 589999999999999999 6789999999999988 9999999999998876622111
Q ss_pred -hhhhcccCCCCCCCCCCCccchhHHHHHHhhC---------------CchhhhcCCChHHHHHHHcCCHHHHHHHHhcC
Q 004887 60 -KLSSKALAPSASPPSKPSLQRNMIGLWYSFQR---------------LSKKIVLQHRTPLMVAAEYGSVDVVKLILSLT 123 (725)
Q Consensus 60 -~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~---------------g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~ 123 (725)
+-..++|+.++ +.++.......+..++ -+++.|.+|.||||+||..|+.+.|..||..
T Consensus 222 ~n~~~~pLhlAv-----e~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~- 295 (929)
T KOG0510|consen 222 NNEKATPLHLAV-----EGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGF- 295 (929)
T ss_pred cCCCCcchhhhh-----hcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHc-
Confidence 11223333333 1233333333332211 1222347899999999999999999999999
Q ss_pred CCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHH-CC-CCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCC
Q 004887 124 KADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLF-AG-ADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSV 201 (725)
Q Consensus 124 GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~-~G-ADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadv 201 (725)
|+++|.+ +.++.||||.||.+|+ .++|+-||+ .| ..+|..|..|.||||+|+.. ++.+++++||++||+.
T Consensus 296 Ga~I~~k-n~d~~spLH~AA~yg~---~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~----gH~~v~qlLl~~GA~~ 367 (929)
T KOG0510|consen 296 GASINSK-NKDEESPLHFAAIYGR---INTVERLLQESDTRLLNESDLHGMTPLHLAAKS----GHDRVVQLLLNKGALF 367 (929)
T ss_pred CCccccc-CCCCCCchHHHHHccc---HHHHHHHHhCcCccccccccccCCCchhhhhhc----CHHHHHHHHHhcChhh
Confidence 9999999 8999999999999999 999999999 54 56889999999999999986 6666999999999998
Q ss_pred C---Ccccccccccccccc-CCCCCC----CCCCCccccccCCCCcccc
Q 004887 202 S---FDELQVSSVDLRSSS-SLSSSS----DDSSLSSLTCKSDDVHAFV 242 (725)
Q Consensus 202 n---~~d~~g~Tp~~~ass-~ls~s~----~~~~~~~~~~~~G~TpL~~ 242 (725)
. ..|.+|.|++|-++- +....+ .++.+++.+|+.|.+++++
T Consensus 368 ~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~ 416 (929)
T KOG0510|consen 368 LNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT 416 (929)
T ss_pred hcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence 7 669999999999887 333332 3388999999999999886
No 27
>PHA02798 ankyrin-like protein; Provisional
Probab=99.90 E-value=1.5e-23 Score=239.19 Aligned_cols=230 Identities=14% Similarity=0.047 Sum_probs=184.3
Q ss_pred CCCCcHHHHH----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCcc
Q 004887 10 RNKSSPLKIS----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQ 79 (725)
Q Consensus 10 ~~G~TPLhiA----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~ 79 (725)
.+|.|+++.+ +++|+++|+|||.+|. .|.||||+|+.+. ... ...
T Consensus 34 ~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~--~g~TpL~~~~~n~--~~~---------------------~~~ 88 (489)
T PHA02798 34 VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDN--EYSTPLCTILSNI--KDY---------------------KHM 88 (489)
T ss_pred cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCC--CCCChHHHHHHhH--HhH---------------------HhH
Confidence 4577887755 8999999999999998 9999999988430 000 012
Q ss_pred chhHHHHHHhhCCchhhhcCCChHHHHHHHcC---CHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHH
Q 004887 80 RNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYG---SVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKL 156 (725)
Q Consensus 80 ~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G---~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVkl 156 (725)
.+.+.+++..+.+.+..+..|+||||+|+..+ +.+++++|+++ |+|+|.+ +.+|.||||+|+..|+....+++++
T Consensus 89 ~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~-Gadvn~~-d~~g~tpL~~a~~~~~~~~~~vv~~ 166 (489)
T PHA02798 89 LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIEN-GADTTLL-DKDGFTMLQVYLQSNHHIDIEIIKL 166 (489)
T ss_pred HHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHc-CCCcccc-CCCCCcHHHHHHHcCCcchHHHHHH
Confidence 45666788888888888999999999999986 78999999999 9999999 9999999999999875334899999
Q ss_pred HHHCCCCCCCcC-CCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccc-------cCCCCC----CC
Q 004887 157 LLFAGADSNLTD-AHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSS-------SSLSSS----SD 224 (725)
Q Consensus 157 LL~~GADin~~D-~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~as-------s~ls~s----~~ 224 (725)
|++.|+|++.++ ..|.||||.++..+-.....+++++|+++|++++..+..+.++.+... ...... ..
T Consensus 167 Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~ 246 (489)
T PHA02798 167 LLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIF 246 (489)
T ss_pred HHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHH
Confidence 999999999985 578999999987543345678999999999999999988888754210 000000 11
Q ss_pred CCCCccccccCCCCcccccccCCCcCccCCCCccccccccch
Q 004887 225 DSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIYASD 266 (725)
Q Consensus 225 ~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy~~D 266 (725)
...+++.+|..|.||||+|+..++.+++..|.+.+..+...|
T Consensus 247 ~~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d 288 (489)
T PHA02798 247 SYIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIIT 288 (489)
T ss_pred hcCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccC
Confidence 146888999999999999999999999998887776666544
No 28
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.89 E-value=2.3e-23 Score=232.13 Aligned_cols=188 Identities=24% Similarity=0.186 Sum_probs=105.8
Q ss_pred HHHHHHC-CCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhh-
Q 004887 20 ISIFQKH-TQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIV- 97 (725)
Q Consensus 20 vklLL~~-GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~- 97 (725)
++.|++. |.++|..|. +|.|+||+|+.++++.++. +++..+++++...
T Consensus 60 v~~lve~~g~~v~~~D~--~g~tlLHWAAiNNrl~v~r----------------------------~li~~gadvn~~gG 109 (600)
T KOG0509|consen 60 VKELVESEGESVNNPDR--EGVTLLHWAAINNRLDVAR----------------------------YLISHGADVNAIGG 109 (600)
T ss_pred HHHHHhhcCcCCCCCCc--CCccceeHHHHcCcHHHHH----------------------------HHHHcCCCccccCC
Confidence 5555555 666666665 6666666666555444321 2233333333333
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDV 177 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhl 177 (725)
.-+.||||+|+.+|++.+|++||++ |||++.+ |..|.||||+||..|+ .-+|-+||.+|+|+|.+|.+|+||||+
T Consensus 110 ~l~stPLHWAar~G~~~vv~lLlqh-GAdpt~~-D~~G~~~lHla~~~~~---~~~vayll~~~~d~d~~D~~grTpLmw 184 (600)
T KOG0509|consen 110 VLGSTPLHWAARNGHISVVDLLLQH-GADPTLK-DKQGLTPLHLAAQFGH---TALVAYLLSKGADIDLRDNNGRTPLMW 184 (600)
T ss_pred CCCCCcchHHHHcCcHHHHHHHHHc-CCCCcee-cCCCCcHHHHHHHhCc---hHHHHHHHHhcccCCCcCCCCCCHHHH
Confidence 3455666666666666666666666 6666666 6666666666666666 666666666666666666666666666
Q ss_pred HHhCCCCCCHHHHHHHHHHCCCCCCCcc-ccccccccccccCCCCC----C-CCCCCccccccCCCCcccccccC
Q 004887 178 IVVHPNVPDSRVSLEDLLKNGGSVSFDE-LQVSSVDLRSSSSLSSS----S-DDSSLSSLTCKSDDVHAFVAPEK 246 (725)
Q Consensus 178 A~~~g~~e~~~~ivelLL~~Gadvn~~d-~~g~Tp~~~ass~ls~s----~-~~~~~~~~~~~~G~TpL~~A~e~ 246 (725)
|+.+|+.. .++.||+.|+.++.+| .+|.||+|.+...+... . +.+.+.+..|.+|.||+.+|.++
T Consensus 185 Aaykg~~~----~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 185 AAYKGFAL----FVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred HHHhcccH----HHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 66653322 3666666666666655 56666666544422111 1 11345556666777888887666
No 29
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.89 E-value=9.7e-23 Score=207.49 Aligned_cols=164 Identities=12% Similarity=0.071 Sum_probs=131.4
Q ss_pred ccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCC
Q 004887 6 AVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPS 77 (725)
Q Consensus 6 dv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~ 77 (725)
|+....+.||||.| ++.|++. +|..|. .|.||||+|+..+.
T Consensus 15 ~~~~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~--~g~TpLh~a~~~~~-------------------------- 63 (209)
T PHA02859 15 DYLFYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCND--LYETPIFSCLEKDK-------------------------- 63 (209)
T ss_pred HHHhhccCcHHHHHHHhCcHHHHHHHHHh---hhccCc--cCCCHHHHHHHcCC--------------------------
Confidence 45567889999999 6777764 567777 89999999995421
Q ss_pred ccchhHHHHHHhhCCchhhh-cCCChHHHHHHHc---CCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhC--CCCCHH
Q 004887 78 LQRNMIGLWYSFQRLSKKIV-LQHRTPLMVAAEY---GSVDVVKLILSLTKADVNLTCGLDKSTALHCAASG--GSVNAV 151 (725)
Q Consensus 78 ~~~~~~~L~~a~~~g~~~~~-~~G~TPLh~Aa~~---G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~--G~~~~~ 151 (725)
+....+.+++..+.+.+..+ ..|.||||+|+.. ++.+++++|+++ |+++|.+ +.+|.||||+|+.. ++ .
T Consensus 64 ~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~-gadin~~-d~~G~TpLh~a~~~~~~~---~ 138 (209)
T PHA02859 64 VNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDS-GSSITEE-DEDGKNLLHMYMCNFNVR---I 138 (209)
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHhccCC---H
Confidence 12344556667777777665 4799999998864 479999999999 9999999 99999999998863 56 8
Q ss_pred HHHHHHHHCCCCCCCcCCCCCcHHHHH-HhCCCCCCHHHHHHHHHHCCCCCCCcccccc
Q 004887 152 DVVKLLLFAGADSNLTDAHGNRPFDVI-VVHPNVPDSRVSLEDLLKNGGSVSFDELQVS 209 (725)
Q Consensus 152 eiVklLL~~GADin~~D~~G~TPLhlA-~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~ 209 (725)
+++++|++.|+|++.+|.+|.||||.+ +.. +..+++++|+++|++++.+|..|.
T Consensus 139 ~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~----~~~~iv~~Ll~~Gadi~~~d~~g~ 193 (209)
T PHA02859 139 NVIKLLIDSGVSFLNKDFDNNNILYSYILFH----SDKKIFDFLTSLGIDINETNKSGY 193 (209)
T ss_pred HHHHHHHHcCCCcccccCCCCcHHHHHHHhc----CCHHHHHHHHHcCCCCCCCCCCCC
Confidence 999999999999999999999999965 444 456799999999999985443333
No 30
>PHA02730 ankyrin-like protein; Provisional
Probab=99.88 E-value=9.9e-23 Score=234.97 Aligned_cols=115 Identities=13% Similarity=0.096 Sum_probs=89.2
Q ss_pred HHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCC--CCCCccccccccccc---cccCC------
Q 004887 151 VDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGG--SVSFDELQVSSVDLR---SSSSL------ 219 (725)
Q Consensus 151 ~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Ga--dvn~~d~~g~Tp~~~---ass~l------ 219 (725)
.++|++||++|||+|.. ..|+||||+|+..++.....+++++|+++|+ +++.+|..|.||++. +....
T Consensus 359 ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~ 437 (672)
T PHA02730 359 IPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCY 437 (672)
T ss_pred HHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhcccccccc
Confidence 67888999999999975 7999999999886431123789999999998 699999999999873 21110
Q ss_pred --------CCCCCCCCCccccccCCCCcccccccCCCcCccCCCCccccccccch
Q 004887 220 --------SSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIYASD 266 (725)
Q Consensus 220 --------s~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy~~D 266 (725)
.-....+++++.+|..|.||||+|+..++.+++..|...+..+...+
T Consensus 438 e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d 492 (672)
T PHA02730 438 ETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTS 492 (672)
T ss_pred chhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCC
Confidence 01112377899999999999999999999999888877766665554
No 31
>PHA02917 ankyrin-like protein; Provisional
Probab=99.88 E-value=1.5e-22 Score=237.44 Aligned_cols=193 Identities=10% Similarity=0.048 Sum_probs=147.0
Q ss_pred cCCccCCCCCCcHHHHH-----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCC
Q 004887 3 AVPAVTMRNKSSPLKIS-----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSAS 71 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiA-----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~ 71 (725)
++++..|.+|+||||+| +++|+++|+|++.++. +|+||||+|+..++.++.... ..
T Consensus 23 ~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~--~g~TpL~~Aa~~g~~~v~~~~---~~-------- 89 (661)
T PHA02917 23 DPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNW--RQLTPLEEYTNSRHVKVNKDI---AM-------- 89 (661)
T ss_pred CcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCC--CCCCHHHHHHHcCChhHHHHH---HH--------
Confidence 45677799999999995 8899999999999988 999999999988775543211 11
Q ss_pred CCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHH--hCCCCC
Q 004887 72 PPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAA--SGGSVN 149 (725)
Q Consensus 72 ~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa--~~G~~~ 149 (725)
+++......+. .+..+++|+|+.+|+.++|++||++ |+|+|.+ |.+|+||||+|+ ..|+
T Consensus 90 -------------~Ll~~~~~~n~--~~~~~~~~~a~~~~~~e~vk~Ll~~-Gadin~~-d~~g~T~L~~~~a~~~~~-- 150 (661)
T PHA02917 90 -------------ALLEATGYSNI--NDFNIFSYMKSKNVDVDLIKVLVEH-GFDLSVK-CENHRSVIENYVMTDDPV-- 150 (661)
T ss_pred -------------HHHhccCCCCC--CCcchHHHHHhhcCCHHHHHHHHHc-CCCCCcc-CCCCccHHHHHHHccCCC--
Confidence 12111110110 1234678889999999999999999 9999999 999999999654 4678
Q ss_pred HHHHHHHHHHCCCCCCCcCCC---C-----------CcHHHHHHhCC------C-CCCHHHHHHHHHHCCCCCCCccccc
Q 004887 150 AVDVVKLLLFAGADSNLTDAH---G-----------NRPFDVIVVHP------N-VPDSRVSLEDLLKNGGSVSFDELQV 208 (725)
Q Consensus 150 ~~eiVklLL~~GADin~~D~~---G-----------~TPLhlA~~~g------~-~e~~~~ivelLL~~Gadvn~~d~~g 208 (725)
.++|++||++|||+|.+|.. | .||||+|+..+ + -.+..+++++|+++|++++.
T Consensus 151 -~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~----- 224 (661)
T PHA02917 151 -PEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS----- 224 (661)
T ss_pred -HHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCccc-----
Confidence 99999999999999876643 4 59999998621 0 02367899999999999985
Q ss_pred cccccccccCCCCCCCCCCCccccccCCCCcccccccCCCc--CccCCCC
Q 004887 209 SSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEY--PIDPSLP 256 (725)
Q Consensus 209 ~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~--~vd~~Lp 256 (725)
++..|.||||+|+++++. +|++.|.
T Consensus 225 -----------------------~d~~G~TpLh~A~~~g~~~~eivk~Li 251 (661)
T PHA02917 225 -----------------------IDKNYCTALQYYIKSSHIDIDIVKLLM 251 (661)
T ss_pred -----------------------CCCCCCcHHHHHHHcCCCcHHHHHHHH
Confidence 556666778888888876 4666553
No 32
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.87 E-value=1.8e-22 Score=225.10 Aligned_cols=176 Identities=24% Similarity=0.213 Sum_probs=142.9
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPP 73 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~ 73 (725)
+.+++..|++|.|+||+| +++|+++|||||..+ ..-|-||||+|+++|++.+
T Consensus 68 g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~g-G~l~stPLHWAar~G~~~v------------------- 127 (600)
T KOG0509|consen 68 GESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIG-GVLGSTPLHWAARNGHISV------------------- 127 (600)
T ss_pred CcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccC-CCCCCCcchHHHHcCcHHH-------------------
Confidence 356777888888888888 788888888888888 3478888888887665444
Q ss_pred CCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHH
Q 004887 74 SKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDV 153 (725)
Q Consensus 74 ~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~ei 153 (725)
+.+++..+++...+|.+|.||||+||.+|+.-+|-|||.+ |+|+|.+ |.+|+||||+|+..|. ...
T Consensus 128 ---------v~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~-~~d~d~~-D~~grTpLmwAaykg~---~~~ 193 (600)
T KOG0509|consen 128 ---------VDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSK-GADIDLR-DNNGRTPLMWAAYKGF---ALF 193 (600)
T ss_pred ---------HHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHh-cccCCCc-CCCCCCHHHHHHHhcc---cHH
Confidence 3477788888888888888888888888888888888888 8888888 8888888888888888 555
Q ss_pred HHHHHHCCCCCCCcC-CCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccc
Q 004887 154 VKLLLFAGADSNLTD-AHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRS 215 (725)
Q Consensus 154 VklLL~~GADin~~D-~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~a 215 (725)
+.+||..|++++.+| .+|+||||+|+..||.. ++.+|++.|++.+..|..|.||..-+
T Consensus 194 v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~----~v~Ll~~g~~~~d~~~~~g~tp~~LA 252 (600)
T KOG0509|consen 194 VRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLT----AVKLLLEGGADLDKTNTNGKTPFDLA 252 (600)
T ss_pred HHHHHHhcccccccccccCCchHHHHHhcCCcc----eEehhhhcCCcccccccCCCCHHHHH
Confidence 888888888888887 78888888888887766 66677777888888888888886443
No 33
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=1.1e-22 Score=242.60 Aligned_cols=200 Identities=26% Similarity=0.242 Sum_probs=135.7
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcC-Chhh------hcCchhh----h
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQN-YLIM------CGGSEKL----S 62 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g-~~ei------~ga~~~l----~ 62 (725)
.++||..+++|.||||.| +++++++|++++.++. .|.|++|+|+..+ +.++ .+.+.++ +
T Consensus 397 ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~--lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G 474 (1143)
T KOG4177|consen 397 GADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAK--LGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQG 474 (1143)
T ss_pred cCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhh--cCCChhhhhhhcccHhhhhhhHhhcCCCcchhcccc
Confidence 367788888888888887 6777788888888887 8888888888776 3332 2222211 1
Q ss_pred hcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHH
Q 004887 63 SKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCA 142 (725)
Q Consensus 63 ~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~A 142 (725)
.+.|+.++ ..++.....++.......+.-...+.|+||.|...+...+++.++++ |++++.+ +..|.||||.|
T Consensus 475 ~T~Lhlaa-----q~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~-ga~v~~~-~~r~~TpLh~A 547 (1143)
T KOG4177|consen 475 FTPLHLAA-----QEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEH-GANVDLR-TGRGYTPLHVA 547 (1143)
T ss_pred Ccchhhhh-----ccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhc-CCceehh-cccccchHHHH
Confidence 11222221 11222222222222222222225677888888888888888888888 8888888 78888888888
Q ss_pred HhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccccc
Q 004887 143 ASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSS 217 (725)
Q Consensus 143 a~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass 217 (725)
|..|+ +.+|++||++|||++.+|+.|+||||.|+..| ..+|+++|+++|+++|..|.+|.||++.+..
T Consensus 548 ~~~g~---v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G----~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~ 615 (1143)
T KOG4177|consen 548 VHYGN---VDLVKFLLEHGADVNAKDKLGYTPLHQAAQQG----HNDIAELLLKHGASVNAADLDGFTPLHIAVR 615 (1143)
T ss_pred HhcCC---chHHHHhhhCCccccccCCCCCChhhHHHHcC----hHHHHHHHHHcCCCCCcccccCcchhHHHHH
Confidence 88888 88888888888888888888888888888864 4558888888888888766666655554443
No 34
>PHA02795 ankyrin-like protein; Provisional
Probab=99.86 E-value=4.2e-21 Score=212.55 Aligned_cols=173 Identities=18% Similarity=0.122 Sum_probs=139.4
Q ss_pred ccCCc------cCCCCCCcHHHHH----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcc
Q 004887 2 VAVPA------VTMRNKSSPLKIS----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKA 65 (725)
Q Consensus 2 ~Adpd------v~d~~G~TPLhiA----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~l 65 (725)
.||+| ..+..++|+||+| +++|+++||||+.++ +.||||.|+..++.++..- +
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~~----~~t~lh~A~~~~~~eIVk~-------L 168 (437)
T PHA02795 100 NYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKIE----CLNAYFRGICKKESSVVEF-------I 168 (437)
T ss_pred ccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCCC----CCCHHHHHHHcCcHHHHHH-------H
Confidence 46777 6778899999999 889999999999855 4899999997766555322 2
Q ss_pred cCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhC
Q 004887 66 LAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASG 145 (725)
Q Consensus 66 L~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~ 145 (725)
+..++.. .+...+++ ....+.|++|.|+..++.+++++|+++ |+|+|.+ +..|.||||+|+..
T Consensus 169 ls~Ga~~-----~n~~~~~l----------~~~~~~t~l~~a~~~~~~eIve~LIs~-GADIN~k-D~~G~TpLh~Aa~~ 231 (437)
T PHA02795 169 LNCGIPD-----ENDVKLDL----------YKIIQYTRGFLVDEPTVLEIYKLCIPY-IEDINQL-DAGGRTLLYRAIYA 231 (437)
T ss_pred HhcCCcc-----cccccchh----------hhhhccchhHHHHhcCHHHHHHHHHhC-cCCcCcC-CCCCCCHHHHHHHc
Confidence 2222210 00001111 113477999999999999999999999 9999999 99999999999999
Q ss_pred CCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCC----CCHHHHHHHHHHCCCCCCCcc
Q 004887 146 GSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNV----PDSRVSLEDLLKNGGSVSFDE 205 (725)
Q Consensus 146 G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~----e~~~~ivelLL~~Gadvn~~d 205 (725)
|+ .++|++|++.||+++.+|..|+||||+|+..|+. ....+++++|+++|++++...
T Consensus 232 g~---~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~ 292 (437)
T PHA02795 232 GY---IDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK 292 (437)
T ss_pred CC---HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence 99 9999999999999999999999999999998752 346789999999999998643
No 35
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.84 E-value=1.4e-20 Score=191.53 Aligned_cols=147 Identities=13% Similarity=0.104 Sum_probs=125.8
Q ss_pred CCccCCCCCCcHHHHH----------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCC
Q 004887 4 VPAVTMRNKSSPLKIS----------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPP 73 (725)
Q Consensus 4 dpdv~d~~G~TPLhiA----------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~ 73 (725)
.+|..|..|.||||+| +++|+++|+|+|.++ +..|+||||+|+..+.
T Consensus 43 ~~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~-~~~g~TpLh~a~~~~~---------------------- 99 (209)
T PHA02859 43 FVNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKT-RDNNLSALHHYLSFNK---------------------- 99 (209)
T ss_pred hhhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccC-CCCCCCHHHHHHHhCc----------------------
Confidence 4678899999999998 789999999999997 3389999999874211
Q ss_pred CCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHH--cCCHHHHHHHHhcCCCCcccccCCCCchHHHH-HHhCCCCCH
Q 004887 74 SKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAE--YGSVDVVKLILSLTKADVNLTCGLDKSTALHC-AASGGSVNA 150 (725)
Q Consensus 74 ~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~--~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~-Aa~~G~~~~ 150 (725)
....+.+.+++..+.+.+..+..|.||||+|+. .++.+++++|+++ |+++|.+ |.+|.||||. |+..++
T Consensus 100 ---~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~-gadin~~-d~~g~t~Lh~~a~~~~~--- 171 (209)
T PHA02859 100 ---NVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDS-GVSFLNK-DFDNNNILYSYILFHSD--- 171 (209)
T ss_pred ---cccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHc-CCCcccc-cCCCCcHHHHHHHhcCC---
Confidence 012345556777788888889999999999986 4689999999999 9999999 9999999996 566778
Q ss_pred HHHHHHHHHCCCCCCCcCCCCCcHHHHHHhC
Q 004887 151 VDVVKLLLFAGADSNLTDAHGNRPFDVIVVH 181 (725)
Q Consensus 151 ~eiVklLL~~GADin~~D~~G~TPLhlA~~~ 181 (725)
.+++++|++.|+|++.+|..|+||||+|...
T Consensus 172 ~~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~ 202 (209)
T PHA02859 172 KKIFDFLTSLGIDINETNKSGYNCYDLIKFR 202 (209)
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence 9999999999999999999999999999874
No 36
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.84 E-value=4e-21 Score=229.40 Aligned_cols=197 Identities=22% Similarity=0.160 Sum_probs=164.7
Q ss_pred ccCCccCCCCCCcHHHHH---------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhh----------h
Q 004887 2 VAVPAVTMRNKSSPLKIS---------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKL----------S 62 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA---------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l----------~ 62 (725)
.|+++..+..|+||||+| ...+++.|+++|..-. .|.||||+|+..|+.++.....+. .
T Consensus 430 gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~--~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~ 507 (1143)
T KOG4177|consen 430 GASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSK--QGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKG 507 (1143)
T ss_pred CCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhcc--ccCcchhhhhccCCchHHHHhhhcCCccCccchhc
Confidence 689999999999999999 3357888999999999 999999999999998884332221 1
Q ss_pred hcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHH
Q 004887 63 SKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCA 142 (725)
Q Consensus 63 ~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~A 142 (725)
-..++.+. ..+.......++..+..++.....|.||||+|+.+|++++|++||++ |+|++.+ ++.|+||||.|
T Consensus 508 l~~lhla~-----~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~-gAdv~ak-~~~G~TPLH~A 580 (1143)
T KOG4177|consen 508 LTPLHLAA-----DEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEH-GADVNAK-DKLGYTPLHQA 580 (1143)
T ss_pred cchhhhhh-----hhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhC-Ccccccc-CCCCCChhhHH
Confidence 12222222 23345566667777777777888999999999999999999999999 9999999 89999999999
Q ss_pred HhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCC-----CCCccccccccccc
Q 004887 143 ASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGS-----VSFDELQVSSVDLR 214 (725)
Q Consensus 143 a~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gad-----vn~~d~~g~Tp~~~ 214 (725)
|..|+ .+|+++|+++||++|..|.+|.|||++|+..|++. ++++|+..+++ ....+..|.+|...
T Consensus 581 a~~G~---~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~----~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v 650 (1143)
T KOG4177|consen 581 AQQGH---NDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLS----VVKLLKVVTATPAATDPVKENRKGAVPEDV 650 (1143)
T ss_pred HHcCh---HHHHHHHHHcCCCCCcccccCcchhHHHHHhcccc----hhhHHHhccCccccccchhhhhcccChhhH
Confidence 99999 99999999999999999999999999999997776 99999999988 56666667666543
No 37
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.84 E-value=9.7e-22 Score=211.18 Aligned_cols=141 Identities=23% Similarity=0.244 Sum_probs=105.9
Q ss_pred cchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHH
Q 004887 79 QRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLL 158 (725)
Q Consensus 79 ~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL 158 (725)
+.+.+.+++..+..++.......|||--||..|++++||+|+++ |+|++.. ++.|.|.||+||..|+ .+|+++|+
T Consensus 96 Hl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~-gad~~Ia-nrhGhTcLmIa~ykGh---~~I~qyLl 170 (615)
T KOG0508|consen 96 HLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEH-GADPEIA-NRHGHTCLMIACYKGH---VDIAQYLL 170 (615)
T ss_pred cHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHc-CCCCccc-ccCCCeeEEeeeccCc---hHHHHHHH
Confidence 33444444444444444445666788888888888888888877 8888877 7788888888888888 78888888
Q ss_pred HCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCC
Q 004887 159 FAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDV 238 (725)
Q Consensus 159 ~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~T 238 (725)
+.|||+|.++..|+|+||.++..|+++ |+++|+++|+.++ +|..|-|
T Consensus 171 e~gADvn~ks~kGNTALH~caEsG~vd----ivq~Ll~~ga~i~-----------------------------~d~~Gmt 217 (615)
T KOG0508|consen 171 EQGADVNAKSYKGNTALHDCAESGSVD----IVQLLLKHGAKID-----------------------------VDGHGMT 217 (615)
T ss_pred HhCCCcchhcccCchHHHhhhhcccHH----HHHHHHhCCceee-----------------------------ecCCCCc
Confidence 888888888888888888888775555 8888888877764 4666889
Q ss_pred cccccccCCCcCccCCCCc
Q 004887 239 HAFVAPEKKEYPIDPSLPD 257 (725)
Q Consensus 239 pL~~A~e~g~~~vd~~Lpd 257 (725)
||..|+..|+.+|+..|.+
T Consensus 218 PL~~Aa~tG~~~iVe~L~~ 236 (615)
T KOG0508|consen 218 PLLLAAVTGHTDIVERLLQ 236 (615)
T ss_pred hHHHHhhhcchHHHHHHhc
Confidence 9999999999999887764
No 38
>PHA02795 ankyrin-like protein; Provisional
Probab=99.82 E-value=2.8e-20 Score=206.06 Aligned_cols=176 Identities=14% Similarity=0.054 Sum_probs=137.3
Q ss_pred cCCccCCCCCCcHHHHH-------HHHHHHCCCCcc------CcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCC
Q 004887 3 AVPAVTMRNKSSPLKIS-------ISIFQKHTQNVF------LVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPS 69 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiA-------vklLL~~GADVN------~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~a 69 (725)
+++|..+.+| ..| +++|+.+|+++| .++. .++|+||+|+.+++
T Consensus 73 ~~i~~~~~~~----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~--~~~~~L~~~~~n~~------------------ 128 (437)
T PHA02795 73 DNIDQYIVDR----LFAYITYKDIISALVSKNYMEDIFSIIIKNCN--SVQDLLLYYLSNAY------------------ 128 (437)
T ss_pred cchhhhhhhh----HHhhcchHHHHHHHHhcccccchhhhhhhccc--cccHHHHHHHHhcC------------------
Confidence 5666666666 222 889999999988 6666 89999999996311
Q ss_pred CCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccC-----CCCchHHHHHHh
Q 004887 70 ASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCG-----LDKSTALHCAAS 144 (725)
Q Consensus 70 a~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d-----~~G~TpLH~Aa~ 144 (725)
+..+.+.+++..+++.+. .++.||||.|+..|+.+++++|+++ |++.+...+ ..+.|++|.|+.
T Consensus 129 --------n~~eiV~~LI~~GADIn~--~~~~t~lh~A~~~~~~eIVk~Lls~-Ga~~~n~~~~~l~~~~~~t~l~~a~~ 197 (437)
T PHA02795 129 --------VEIDIVDFMVDHGAVIYK--IECLNAYFRGICKKESSVVEFILNC-GIPDENDVKLDLYKIIQYTRGFLVDE 197 (437)
T ss_pred --------CCHHHHHHHHHCCCCCCC--CCCCCHHHHHHHcCcHHHHHHHHhc-CCcccccccchhhhhhccchhHHHHh
Confidence 223444456666665553 3568999999999999999999999 875433211 347889999999
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCC
Q 004887 145 GGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSD 224 (725)
Q Consensus 145 ~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~ 224 (725)
.++ .+++++|+++|||+|.+|..|.||||+|+..| ..+++++|+++|++++.
T Consensus 198 ~~~---~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g----~~eiVelLL~~GAdIN~--------------------- 249 (437)
T PHA02795 198 PTV---LEIYKLCIPYIEDINQLDAGGRTLLYRAIYAG----YIDLVSWLLENGANVNA--------------------- 249 (437)
T ss_pred cCH---HHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcC----CHHHHHHHHHCCCCCCC---------------------
Confidence 998 99999999999999999999999999999974 45599999999999985
Q ss_pred CCCCccccccCCCCcccccccCCC
Q 004887 225 DSSLSSLTCKSDDVHAFVAPEKKE 248 (725)
Q Consensus 225 ~~~~~~~~~~~G~TpL~~A~e~g~ 248 (725)
++..|.||||+|+++|.
T Consensus 250 -------~d~~G~TpLh~Aa~~g~ 266 (437)
T PHA02795 250 -------VMSNGYTCLDVAVDRGS 266 (437)
T ss_pred -------cCCCCCCHHHHHHHcCC
Confidence 55667788899988874
No 39
>PHA02730 ankyrin-like protein; Provisional
Probab=99.82 E-value=6.6e-20 Score=211.76 Aligned_cols=153 Identities=12% Similarity=0.061 Sum_probs=86.1
Q ss_pred HHHHHHHcC---CHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCC-CCHHHHHHHHHHCCC--CCCCcCCCCCcHHH
Q 004887 103 PLMVAAEYG---SVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGS-VNAVDVVKLLLFAGA--DSNLTDAHGNRPFD 176 (725)
Q Consensus 103 PLh~Aa~~G---~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~-~~~~eiVklLL~~GA--Din~~D~~G~TPLh 176 (725)
.||.=..++ +.+++++||++ |||+|.. ..|.||||+|+..++ .-..++|++||++|| |+|.+|.+|.||||
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs~-GAdIN~k--~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh 422 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLDN-GATMDKT--TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMY 422 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHHC-CCCCCcC--CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHh
Confidence 344444444 35666666666 6666653 466666666665542 001466666666665 46666666666666
Q ss_pred H---HHhCCC----CCC-HHHHHHHHHHCCCCCCCccccccccccccccCCCC-----CCCCCCCcccccc-CCCCcccc
Q 004887 177 V---IVVHPN----VPD-SRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSS-----SSDDSSLSSLTCK-SDDVHAFV 242 (725)
Q Consensus 177 l---A~~~g~----~e~-~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~-----s~~~~~~~~~~~~-~G~TpL~~ 242 (725)
. |...+. .+. ..+++++|+.+|++++.+|..|.||++.++..... ....+++++.++. .|.||||.
T Consensus 423 ~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~ 502 (672)
T PHA02730 423 GLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQK 502 (672)
T ss_pred HHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHH
Confidence 2 221111 011 23456666666666666666666666655441111 1222556667776 48899999
Q ss_pred cccC--CCcCccCCCCcc
Q 004887 243 APEK--KEYPIDPSLPDI 258 (725)
Q Consensus 243 A~e~--g~~~vd~~Lpdi 258 (725)
|+.. ++.+++..|.+.
T Consensus 503 Aa~~~~~~~eIv~~LLs~ 520 (672)
T PHA02730 503 SSYRRENKTKLVDLLLSY 520 (672)
T ss_pred HHHhhcCcHHHHHHHHHc
Confidence 9863 567776655443
No 40
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.81 E-value=1.4e-19 Score=218.65 Aligned_cols=162 Identities=17% Similarity=0.084 Sum_probs=139.4
Q ss_pred CCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccc
Q 004887 9 MRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQR 80 (725)
Q Consensus 9 d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~ 80 (725)
+.++.++||.| ++.|++.|+|+|..|. +|+||||+|+..|+.++.
T Consensus 522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~--~G~TpLh~Aa~~g~~~~v------------------------- 574 (823)
T PLN03192 522 DPNMASNLLTVASTGNAALLEELLKAKLDPDIGDS--KGRTPLHIAASKGYEDCV------------------------- 574 (823)
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHcChHHHH-------------------------
Confidence 33567899988 8899999999999998 999999999977665543
Q ss_pred hhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHC
Q 004887 81 NMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFA 160 (725)
Q Consensus 81 ~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~ 160 (725)
.+++..+.+.+..+.+|.||||+|+..|+.+++++|++. ++..+ ...|.++||+|+..|+ .+++++|+++
T Consensus 575 ---~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~-~~~~~---~~~~~~~L~~Aa~~g~---~~~v~~Ll~~ 644 (823)
T PLN03192 575 ---LVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHF-ASISD---PHAAGDLLCTAAKRND---LTAMKELLKQ 644 (823)
T ss_pred ---HHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhc-CcccC---cccCchHHHHHHHhCC---HHHHHHHHHC
Confidence 345555666777788999999999999999999999987 77655 3467799999999999 9999999999
Q ss_pred CCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccc-ccc
Q 004887 161 GADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQV-SSV 211 (725)
Q Consensus 161 GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g-~Tp 211 (725)
|+|+|.+|.+|+||||+|+..| ..+++++|+++|++++..|..| .||
T Consensus 645 Gadin~~d~~G~TpLh~A~~~g----~~~iv~~Ll~~GAdv~~~~~~g~~t~ 692 (823)
T PLN03192 645 GLNVDSEDHQGATALQVAMAED----HVDMVRLLIMNGADVDKANTDDDFSP 692 (823)
T ss_pred CCCCCCCCCCCCCHHHHHHHCC----cHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence 9999999999999999999974 4559999999999999877666 444
No 41
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.81 E-value=1.6e-19 Score=177.23 Aligned_cols=150 Identities=15% Similarity=0.115 Sum_probs=123.1
Q ss_pred HCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHH
Q 004887 25 KHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPL 104 (725)
Q Consensus 25 ~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPL 104 (725)
.+|+|++..+. ++.++||.||+.++...+.. .+.+++..+...+..+..|+|||
T Consensus 8 ~~~~~~~~~~~--~~~~~l~~a~~~g~~~~l~~------------------------~~~~l~~~g~~~~~~d~~g~t~L 61 (166)
T PHA02743 8 GNNLGAVEIDE--DEQNTFLRICRTGNIYELME------------------------VAPFISGDGHLLHRYDHHGRQCT 61 (166)
T ss_pred ccchHHhhhcc--CCCcHHHHHHHcCCHHHHHH------------------------HHHHHhhcchhhhccCCCCCcHH
Confidence 46788888887 89999999997766543211 11123333344455678899999
Q ss_pred HHHHHcCCHHH---HHHHHhcCCCCcccccC-CCCchHHHHHHhCCCCCHHHHHHHHHH-CCCCCCCcCCCCCcHHHHHH
Q 004887 105 MVAAEYGSVDV---VKLILSLTKADVNLTCG-LDKSTALHCAASGGSVNAVDVVKLLLF-AGADSNLTDAHGNRPFDVIV 179 (725)
Q Consensus 105 h~Aa~~G~~ei---Vk~LLe~~GadVN~~~d-~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADin~~D~~G~TPLhlA~ 179 (725)
|+|+.+|+.++ +++|++. |+++|.+ + ..|.||||+|+..|+ .+++++|++ .|++++.+|..|.||||+|+
T Consensus 62 h~Aa~~g~~~~~~~i~~Ll~~-Gadin~~-d~~~g~TpLh~A~~~g~---~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~ 136 (166)
T PHA02743 62 HMVAWYDRANAVMKIELLVNM-GADINAR-ELGTGNTLLHIAASTKN---YELAEWLCRQLGVNLGAINYQHETAYHIAY 136 (166)
T ss_pred HHHHHhCccCHHHHHHHHHHc-CCCCCCC-CCCCCCcHHHHHHHhCC---HHHHHHHHhccCCCccCcCCCCCCHHHHHH
Confidence 99999998654 8999999 9999998 6 589999999999999 999999995 79999999999999999999
Q ss_pred hCCCCCCHHHHHHHHHHCCCCCCCcccccc
Q 004887 180 VHPNVPDSRVSLEDLLKNGGSVSFDELQVS 209 (725)
Q Consensus 180 ~~g~~e~~~~ivelLL~~Gadvn~~d~~g~ 209 (725)
..+ ..+++++|+++|++++.++..|.
T Consensus 137 ~~~----~~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 137 KMR----DRRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred HcC----CHHHHHHHHHcCCCCCCcccCCc
Confidence 974 45699999999999998887765
No 42
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.80 E-value=1.5e-19 Score=189.62 Aligned_cols=159 Identities=27% Similarity=0.330 Sum_probs=129.5
Q ss_pred CccCCCCCCcHHHHH--------HHHHHHCC-CCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCC
Q 004887 5 PAVTMRNKSSPLKIS--------ISIFQKHT-QNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSK 75 (725)
Q Consensus 5 pdv~d~~G~TPLhiA--------vklLL~~G-ADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~ 75 (725)
+|+.|.+|.|+||+| |+.||+.| .||+..+. -|.||+|+|+.. .+..
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNr--AGYtpiMLaALA----~lk~------------------ 316 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNR--AGYTPVMLAALA----KLKQ------------------ 316 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCccccccccc--ccccHHHHHHHH----hhcc------------------
Confidence 688999999999999 88999987 59999998 999999999932 1111
Q ss_pred CCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHH
Q 004887 76 PSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVK 155 (725)
Q Consensus 76 ~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVk 155 (725)
..+...+.-++..+.-....-..|.|+||+|+..|+.++|+.||.. |+|||.+ |.+|.|+|+|||.+|+ .|||+
T Consensus 317 -~~d~~vV~~LF~mgnVNaKAsQ~gQTALMLAVSHGr~d~vk~LLac-gAdVNiQ-DdDGSTALMCA~EHGh---kEivk 390 (452)
T KOG0514|consen 317 -PADRTVVERLFKMGDVNAKASQHGQTALMLAVSHGRVDMVKALLAC-GADVNIQ-DDDGSTALMCAAEHGH---KEIVK 390 (452)
T ss_pred -hhhHHHHHHHHhccCcchhhhhhcchhhhhhhhcCcHHHHHHHHHc-cCCCccc-cCCccHHHhhhhhhCh---HHHHH
Confidence 1122222223333322223336899999999999999999999998 9999999 9999999999999999 99999
Q ss_pred HHHHC-CCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHC
Q 004887 156 LLLFA-GADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKN 197 (725)
Q Consensus 156 lLL~~-GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~ 197 (725)
+||.. ++|+...|.+|-|+|.+|...|+.+ |.-+|..+
T Consensus 391 lLLA~p~cd~sLtD~DgSTAl~IAleagh~e----Ia~mlYa~ 429 (452)
T KOG0514|consen 391 LLLAVPSCDISLTDVDGSTALSIALEAGHRE----IAVMLYAH 429 (452)
T ss_pred HHhccCcccceeecCCCchhhhhHHhcCchH----HHHHHHHH
Confidence 99987 8999999999999999999985554 87777654
No 43
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.79 E-value=7.5e-20 Score=180.60 Aligned_cols=173 Identities=25% Similarity=0.182 Sum_probs=138.6
Q ss_pred CCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCcc
Q 004887 8 TMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQ 79 (725)
Q Consensus 8 ~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~ 79 (725)
.+.+|+..+|.| +..++..|+..|..+. -+++|+.+++.+.++..+
T Consensus 92 t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~--~p~s~~slsVhql~L~~~------------------------ 145 (296)
T KOG0502|consen 92 TDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSL--MPWSPLSLSVHQLHLDVV------------------------ 145 (296)
T ss_pred CCchhhhhhhhcCCCCCcceeeeeecccccCCcccc--ccCChhhHHHHHHHHHHH------------------------
Confidence 344566666666 4456666666666666 667777766643222211
Q ss_pred chhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHH
Q 004887 80 RNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLF 159 (725)
Q Consensus 80 ~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~ 159 (725)
.......++.+|..|.|||+||+.+|++.+|++||+. |+|++.. ++...|+|.+|+.+|. .+||++||.
T Consensus 146 ------~~~~~n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~-GAdp~~l-gk~resALsLAt~ggy---tdiV~lLL~ 214 (296)
T KOG0502|consen 146 ------DLLVNNKVNACDEFGFTPLIWAAAKGHIPVVQFLLNS-GADPDAL-GKYRESALSLATRGGY---TDIVELLLT 214 (296)
T ss_pred ------HHHhhccccCccccCchHhHHHHhcCchHHHHHHHHc-CCChhhh-hhhhhhhHhHHhcCCh---HHHHHHHHh
Confidence 1112345667789999999999999999999999999 9999999 9999999999999999 999999999
Q ss_pred CCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCc
Q 004887 160 AGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVH 239 (725)
Q Consensus 160 ~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~Tp 239 (725)
++.|+|..|-+|-|||-||++. ++.++++.||..|++++. .+..|+++
T Consensus 215 r~vdVNvyDwNGgTpLlyAvrg----nhvkcve~Ll~sGAd~t~----------------------------e~dsGy~~ 262 (296)
T KOG0502|consen 215 REVDVNVYDWNGGTPLLYAVRG----NHVKCVESLLNSGADVTQ----------------------------EDDSGYWI 262 (296)
T ss_pred cCCCcceeccCCCceeeeeecC----ChHHHHHHHHhcCCCccc----------------------------ccccCCcH
Confidence 9999999999999999999996 666799999999999984 56677788
Q ss_pred ccccccCCCc
Q 004887 240 AFVAPEKKEY 249 (725)
Q Consensus 240 L~~A~e~g~~ 249 (725)
+.+|+.-|+.
T Consensus 263 mdlAValGyr 272 (296)
T KOG0502|consen 263 MDLAVALGYR 272 (296)
T ss_pred HHHHHHhhhH
Confidence 8888777765
No 44
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.79 E-value=1.1e-19 Score=217.40 Aligned_cols=136 Identities=21% Similarity=0.113 Sum_probs=110.9
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccC-------------CCCchHHHHHHhCCCCCHHHHHHHHHHCCCCC
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCG-------------LDKSTALHCAASGGSVNAVDVVKLLLFAGADS 164 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d-------------~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADi 164 (725)
..|.||||+||..|+.++|++||++ |+|+|.++. ..|.||||+|+..|+ .+++++|++.|+|+
T Consensus 126 ~~G~TpLhlAa~~~~~eiVklLL~~-GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~---~~iv~lLl~~gadi 201 (743)
T TIGR00870 126 TPGITALHLAAHRQNYEIVKLLLER-GASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGS---PSIVALLSEDPADI 201 (743)
T ss_pred CCCCcHHHHHHHhCCHHHHHHHHhC-CCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCC---HHHHHHHhcCCcch
Confidence 4699999999999999999999999 999997632 358999999999999 99999999999999
Q ss_pred CCcCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCc
Q 004887 165 NLTDAHGNRPFDVIVVHPN-----VPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVH 239 (725)
Q Consensus 165 n~~D~~G~TPLhlA~~~g~-----~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~Tp 239 (725)
+.+|..|+||||+|+..+. .+....+.++++..++....... ..+++|..|.||
T Consensus 202 n~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~e---------------------l~~i~N~~g~TP 260 (743)
T TIGR00870 202 LTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKE---------------------LEVILNHQGLTP 260 (743)
T ss_pred hhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHh---------------------hhhhcCCCCCCc
Confidence 9999999999999998641 11234466777777665532100 012678899999
Q ss_pred ccccccCCCcCccCCCCcc
Q 004887 240 AFVAPEKKEYPIDPSLPDI 258 (725)
Q Consensus 240 L~~A~e~g~~~vd~~Lpdi 258 (725)
||+|++.|+.++...|..+
T Consensus 261 L~~A~~~g~~~l~~lLL~~ 279 (743)
T TIGR00870 261 LKLAAKEGRIVLFRLKLAI 279 (743)
T ss_pred hhhhhhcCCccHHHHHHHH
Confidence 9999999999998766655
No 45
>PHA02917 ankyrin-like protein; Provisional
Probab=99.78 E-value=1.4e-18 Score=204.20 Aligned_cols=162 Identities=14% Similarity=0.061 Sum_probs=130.6
Q ss_pred ccCCccCCCCCCcHHHHH------------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS------------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPS 69 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA------------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~a 69 (725)
+||++..|.+|.||||+| +++|++++.++|..+. .+++|+|+..++.
T Consensus 58 ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~~~~----~~~~~~a~~~~~~----------------- 116 (661)
T PHA02917 58 GTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNINDF----NIFSYMKSKNVDV----------------- 116 (661)
T ss_pred CCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCCCCc----chHHHHHhhcCCH-----------------
Confidence 689999999999999998 2467777665666553 3667777754433
Q ss_pred CCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHH--HcCCHHHHHHHHhcCCCCcccccCC---CC---------
Q 004887 70 ASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAA--EYGSVDVVKLILSLTKADVNLTCGL---DK--------- 135 (725)
Q Consensus 70 a~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa--~~G~~eiVk~LLe~~GadVN~~~d~---~G--------- 135 (725)
+.+.+++..+.+.+..+..|+||||+|+ ..|+.++|++||++ |+++|.. +. .|
T Consensus 117 -----------e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~-Ga~vn~~-d~~~~~g~~~~~~~~~ 183 (661)
T PHA02917 117 -----------DLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIEN-GCSVLYE-DEDDEYGYAYDDYQPR 183 (661)
T ss_pred -----------HHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHc-CCCcccc-cccccccccccccccc
Confidence 3445677778888888899999999654 57899999999999 9999875 33 34
Q ss_pred --chHHHHHHh-----------CCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCC
Q 004887 136 --STALHCAAS-----------GGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVS 202 (725)
Q Consensus 136 --~TpLH~Aa~-----------~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn 202 (725)
.||||+|+. .++ .++|++|++.|||+|.+|.+|.||||+|+..|+.+ .+++++|++ |++++
T Consensus 184 ~~~t~L~~a~~~~~~~~~~~~~~~~---~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~--~eivk~Li~-g~d~~ 257 (661)
T PHA02917 184 NCGTVLHLYIISHLYSESDTRAYVR---PEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHID--IDIVKLLMK-GIDNT 257 (661)
T ss_pred ccccHHHHHHhhcccccccccccCc---HHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCc--HHHHHHHHh-CCccc
Confidence 599999986 346 89999999999999999999999999999987643 569999985 88876
Q ss_pred C
Q 004887 203 F 203 (725)
Q Consensus 203 ~ 203 (725)
.
T Consensus 258 ~ 258 (661)
T PHA02917 258 A 258 (661)
T ss_pred c
Confidence 3
No 46
>PHA02792 ankyrin-like protein; Provisional
Probab=99.78 E-value=2.9e-18 Score=196.47 Aligned_cols=197 Identities=16% Similarity=0.073 Sum_probs=132.6
Q ss_pred CccCCCCCCcHHHHH---------------HHHHHHCCCCccCcCCCCCCChHHHHHHHcC--ChhhhcC----------
Q 004887 5 PAVTMRNKSSPLKIS---------------ISIFQKHTQNVFLVDFAINDRTLLILLFFQN--YLIMCGG---------- 57 (725)
Q Consensus 5 pdv~d~~G~TPLhiA---------------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g--~~ei~ga---------- 57 (725)
.|..|+.|.||||+| +++|+.+|++++.+|. .|.||||+|+.+. ..++...
T Consensus 168 i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~--~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~ 245 (631)
T PHA02792 168 TDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTY--REHTTLYYYVDKCDIKREIFDALFDSNYSGNE 245 (631)
T ss_pred cccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCC--CCChHHHHHHHcccchHHHHHHHHhccccccc
Confidence 467788999999999 6899999999999998 9999999999887 3333110
Q ss_pred --------------------chhhhhcccCCCCCCC------CCCC---------------------------ccchhHH
Q 004887 58 --------------------SEKLSSKALAPSASPP------SKPS---------------------------LQRNMIG 84 (725)
Q Consensus 58 --------------------~~~l~~~lL~~aa~~~------~~~~---------------------------~~~~~~~ 84 (725)
+..+...+|....... .... ...+.+.
T Consensus 246 ~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK 325 (631)
T PHA02792 246 LMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIK 325 (631)
T ss_pred hHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHH
Confidence 0011222222111000 0000 0011111
Q ss_pred HHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCC--chHHHHHHhCCCCCHHHHHHHHHHCCC
Q 004887 85 LWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDK--STALHCAASGGSVNAVDVVKLLLFAGA 162 (725)
Q Consensus 85 L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G--~TpLH~Aa~~G~~~~~eiVklLL~~GA 162 (725)
+++..+. ..........++.||..|+.++|++|+++ |||+|.+ |.+| .||||+|+........+++++|+++||
T Consensus 326 ~LId~Ga--~~~r~~~~n~~~~Aa~~gn~eIVelLIs~-GADIN~k-D~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GA 401 (631)
T PHA02792 326 CMIDEGA--TLYRFKHINKYFQKFDNRDPKVVEYILKN-GNVVVED-DDNIINIMPLFPTLSIHESDVLSILKLCKPYID 401 (631)
T ss_pred HHHHCCC--ccccCCcchHHHHHHHcCCHHHHHHHHHc-CCchhhh-cCCCCChhHHHHHHHhccHhHHHHHHHHHhcCC
Confidence 1111111 11012356678889999999999999999 9999988 6654 689998877766333457888899999
Q ss_pred CCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccc
Q 004887 163 DSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSV 211 (725)
Q Consensus 163 Din~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp 211 (725)
|+|.+|..|+||||+|+.. +..+++++|+++|++++.+|..|.||
T Consensus 402 DIN~kD~~G~TPLh~Aa~~----~n~eivelLLs~GADIN~kD~~G~Tp 446 (631)
T PHA02792 402 DINKIDKHGRSILYYCIES----HSVSLVEWLIDNGADINITTKYGSTC 446 (631)
T ss_pred ccccccccCcchHHHHHHc----CCHHHHHHHHHCCCCCCCcCCCCCCH
Confidence 9999999999999999986 45569999999999998644444433
No 47
>PHA02792 ankyrin-like protein; Provisional
Probab=99.77 E-value=4.6e-19 Score=202.91 Aligned_cols=246 Identities=12% Similarity=0.005 Sum_probs=173.2
Q ss_pred ccCCccCCCCCCcHHHHH---------HHHHHHCCCCccCcCCCCCCChHHHHHHH-cCChhhhcCchhhhhcccCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS---------ISIFQKHTQNVFLVDFAINDRTLLILLFF-QNYLIMCGGSEKLSSKALAPSAS 71 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA---------vklLL~~GADVN~~D~D~~G~TpLHlAa~-~g~~ei~ga~~~l~~~lL~~aa~ 71 (725)
+-+|+..|.+|.+++|+- |++|+++|||||.+++ .|+|+||+|+. .++.++ ...++..++.
T Consensus 61 ~~~~~~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~n--~~~~~l~ya~~~~~~~ei-------vk~Ll~~Gad 131 (631)
T PHA02792 61 LSSVDYKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIKN--GINIVEKYATTSNPNVDV-------FKLLLDKGIP 131 (631)
T ss_pred HhCCCcCccCCccHHHHHHHhcccHHHHHHHHHcCCCcccccC--CCCcceeEeecCCCChHH-------HHHHHHCCCC
Confidence 346788888888888764 8999999999999997 78999999975 466655 2223332321
Q ss_pred CCCCCCccchhHHHHHHh-----------------hCCchhhhcCCChHHHHHHHcC-------CHHHHHHHHhcCCCCc
Q 004887 72 PPSKPSLQRNMIGLWYSF-----------------QRLSKKIVLQHRTPLMVAAEYG-------SVDVVKLILSLTKADV 127 (725)
Q Consensus 72 ~~~~~~~~~~~~~L~~a~-----------------~~g~~~~~~~G~TPLh~Aa~~G-------~~eiVk~LLe~~GadV 127 (725)
... ....+.+++.... +...+..+..|.||||+|+..+ +.+++++||++ |+++
T Consensus 132 ~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~-g~~~ 208 (631)
T PHA02792 132 TCS--NIQYGYKIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISH-EKEM 208 (631)
T ss_pred ccc--ccccCcchhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhC-CCCc
Confidence 100 0112222221111 1122234567999999999999 89999999999 9999
Q ss_pred ccccCCCCchHHHHHHhCCCC-----------------------------------------------------------
Q 004887 128 NLTCGLDKSTALHCAASGGSV----------------------------------------------------------- 148 (725)
Q Consensus 128 N~~~d~~G~TpLH~Aa~~G~~----------------------------------------------------------- 148 (725)
+.. |..|.||||+|+...++
T Consensus 209 ~~~-d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~ 287 (631)
T PHA02792 209 RYY-TYREHTTLYYYVDKCDIKREIFDALFDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCN 287 (631)
T ss_pred Ccc-CCCCChHHHHHHHcccchHHHHHHHHhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhh
Confidence 999 89999999999977720
Q ss_pred -------------------------------CHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHC
Q 004887 149 -------------------------------NAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKN 197 (725)
Q Consensus 149 -------------------------------~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~ 197 (725)
-..+++++|++.|++++ .......++.|+.. +..+++++|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~--r~~~~n~~~~Aa~~----gn~eIVelLIs~ 361 (631)
T PHA02792 288 SLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY--RFKHINKYFQKFDN----RDPKVVEYILKN 361 (631)
T ss_pred hhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc--cCCcchHHHHHHHc----CCHHHHHHHHHc
Confidence 24568888888888875 22345678888876 445599999999
Q ss_pred CCCCCCccccc--cccccccccCCCCC--------CCCCCCccccccCCCCcccccccCCCcCccCCCCccccccccch
Q 004887 198 GGSVSFDELQV--SSVDLRSSSSLSSS--------SDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIYASD 266 (725)
Q Consensus 198 Gadvn~~d~~g--~Tp~~~ass~ls~s--------~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy~~D 266 (725)
||+++.+|..| .||++.+....... ...+++++.++..|.||||+|+..++.+++..|.+.+..+...|
T Consensus 362 GADIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD 440 (631)
T PHA02792 362 GNVVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITT 440 (631)
T ss_pred CCchhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 99999888775 57776533322111 22366888899999999999999998888877776655544433
No 48
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.77 E-value=1.2e-19 Score=195.14 Aligned_cols=165 Identities=25% Similarity=0.252 Sum_probs=133.8
Q ss_pred CCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHH
Q 004887 37 INDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVV 116 (725)
Q Consensus 37 ~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiV 116 (725)
.+|.|||.+|+++||..++....+. +.+.+........+ .-..+|.+||..|+..||++||
T Consensus 40 ~~g~tPL~iaaRnGH~~vVeyLle~------~~a~~e~~GsV~FD-------------ge~IegappLWaAsaAGHl~vV 100 (615)
T KOG0508|consen 40 QNGGTPLLIAARNGHADVVEYLLEH------CRASPEQGGSVRFD-------------GETIEGAPPLWAASAAGHLEVV 100 (615)
T ss_pred cCCCCceeeehhcCcHHHHHHHHHH------hcCCccCCceEEeC-------------CcccCCCchhhHHhccCcHHHH
Confidence 3899999999999998875332110 12211000000000 1135799999999999999999
Q ss_pred HHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHH
Q 004887 117 KLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLK 196 (725)
Q Consensus 117 k~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~ 196 (725)
|.|+.+ |++||.. .....|||--||.-|+ .+|||+|+++|||+++.|..|+|.||+|+.+||.+ |+++|++
T Consensus 101 k~L~~~-ga~VN~t-T~TNStPLraACfDG~---leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~----I~qyLle 171 (615)
T KOG0508|consen 101 KLLLRR-GASVNDT-TRTNSTPLRAACFDGH---LEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVD----IAQYLLE 171 (615)
T ss_pred HHHHHh-cCccccc-cccCCccHHHHHhcch---hHHHHHHHHcCCCCcccccCCCeeEEeeeccCchH----HHHHHHH
Confidence 999999 9999998 7888899999999999 99999999999999999999999999999986666 9999999
Q ss_pred CCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCCc
Q 004887 197 NGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPD 257 (725)
Q Consensus 197 ~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpd 257 (725)
.|+|+|. ++..|+|+||.++|.|+++|+..|..
T Consensus 172 ~gADvn~----------------------------ks~kGNTALH~caEsG~vdivq~Ll~ 204 (615)
T KOG0508|consen 172 QGADVNA----------------------------KSYKGNTALHDCAESGSVDIVQLLLK 204 (615)
T ss_pred hCCCcch----------------------------hcccCchHHHhhhhcccHHHHHHHHh
Confidence 9999985 55667788999999999999876653
No 49
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.75 E-value=1.4e-18 Score=167.84 Aligned_cols=99 Identities=15% Similarity=0.180 Sum_probs=89.6
Q ss_pred hhhcCCChHHHHHHHcCCH---HHHHHHHhcCCCCcccccC-CCCchHHHHHHhCCCCCHHHHHHHHHH-CCCCCCCcCC
Q 004887 95 KIVLQHRTPLMVAAEYGSV---DVVKLILSLTKADVNLTCG-LDKSTALHCAASGGSVNAVDVVKLLLF-AGADSNLTDA 169 (725)
Q Consensus 95 ~~~~~G~TPLh~Aa~~G~~---eiVk~LLe~~GadVN~~~d-~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADin~~D~ 169 (725)
..+.+|.||||+|+..|+. +++++|++. |+++|.+ + ..|+||||+|+..|+ .+++++||. .|++++.+|.
T Consensus 50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~-gadin~~-~~~~g~T~Lh~A~~~~~---~~i~~~Ll~~~g~d~n~~~~ 124 (154)
T PHA02736 50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEW-GADINGK-ERVFGNTPLHIAVYTQN---YELATWLCNQPGVNMEILNY 124 (154)
T ss_pred HhcCCCCEEEEeecccCchhHHHHHHHHHHc-CCCcccc-CCCCCCcHHHHHHHhCC---HHHHHHHHhCCCCCCccccC
Confidence 3467899999999999987 468999999 9999998 6 599999999999999 999999998 4999999999
Q ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCC
Q 004887 170 HGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVS 202 (725)
Q Consensus 170 ~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn 202 (725)
.|.||||+|+..| ..+++++|+++|++++
T Consensus 125 ~g~tpL~~A~~~~----~~~i~~~Ll~~ga~~~ 153 (154)
T PHA02736 125 AFKTPYYVACERH----DAKMMNILRAKGAQCK 153 (154)
T ss_pred CCCCHHHHHHHcC----CHHHHHHHHHcCCCCC
Confidence 9999999999974 4559999999999876
No 50
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.75 E-value=8.7e-18 Score=203.12 Aligned_cols=142 Identities=23% Similarity=0.242 Sum_probs=123.3
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCC
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPP 73 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~ 73 (725)
.+|+|..|.+|+||||+| +++|+++|+|+|.+|. +|+||||+|+..++.++.... +..++
T Consensus 548 G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~--~G~TpL~~A~~~g~~~iv~~L-------~~~~~--- 615 (823)
T PLN03192 548 KLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDA--NGNTALWNAISAKHHKIFRIL-------YHFAS--- 615 (823)
T ss_pred CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCC--CCCCHHHHHHHhCCHHHHHHH-------HhcCc---
Confidence 589999999999999999 8899999999999998 999999999988776654322 11111
Q ss_pred CCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHH
Q 004887 74 SKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDV 153 (725)
Q Consensus 74 ~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~ei 153 (725)
.. ....+.++||+|+..|+.+++++||++ |+|+|.+ |.+|+||||+|+..|+ .++
T Consensus 616 ------------------~~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~-Gadin~~-d~~G~TpLh~A~~~g~---~~i 670 (823)
T PLN03192 616 ------------------IS--DPHAAGDLLCTAAKRNDLTAMKELLKQ-GLNVDSE-DHQGATALQVAMAEDH---VDM 670 (823)
T ss_pred ------------------cc--CcccCchHHHHHHHhCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHCCc---HHH
Confidence 11 123577999999999999999999999 9999999 9999999999999999 999
Q ss_pred HHHHHHCCCCCCCcCCCC-CcHHHHHHh
Q 004887 154 VKLLLFAGADSNLTDAHG-NRPFDVIVV 180 (725)
Q Consensus 154 VklLL~~GADin~~D~~G-~TPLhlA~~ 180 (725)
|++|+++|||++..|..| .||++++..
T Consensus 671 v~~Ll~~GAdv~~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 671 VRLLIMNGADVDKANTDDDFSPTELREL 698 (823)
T ss_pred HHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 999999999999999998 899988754
No 51
>PHA02741 hypothetical protein; Provisional
Probab=99.73 E-value=1.5e-17 Score=163.52 Aligned_cols=139 Identities=15% Similarity=0.156 Sum_probs=111.7
Q ss_pred ccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHH
Q 004887 30 VFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAE 109 (725)
Q Consensus 30 VN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~ 109 (725)
++.+|. .|+|+||+|+..|+.+++........ . ...+...+..+..|.||||+|+.
T Consensus 14 ~~~~~~--~g~t~Lh~Aa~~g~~~~v~~l~~~~~-----~-----------------~~~ga~in~~d~~g~T~Lh~A~~ 69 (169)
T PHA02741 14 IAEKNS--EGENFFHEAARCGCFDIIARFTPFIR-----G-----------------DCHAAALNATDDAGQMCIHIAAE 69 (169)
T ss_pred hhcccc--CCCCHHHHHHHcCCHHHHHHHHHHhc-----c-----------------chhhhhhhccCCCCCcHHHHHHH
Confidence 456676 99999999999888776432110000 0 01123345567789999999999
Q ss_pred cCC----HHHHHHHHhcCCCCcccccCC-CCchHHHHHHhCCCCCHHHHHHHHHH-CCCCCCCcCCCCCcHHHHHHhCCC
Q 004887 110 YGS----VDVVKLILSLTKADVNLTCGL-DKSTALHCAASGGSVNAVDVVKLLLF-AGADSNLTDAHGNRPFDVIVVHPN 183 (725)
Q Consensus 110 ~G~----~eiVk~LLe~~GadVN~~~d~-~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADin~~D~~G~TPLhlA~~~g~ 183 (725)
.|+ .+++++|++. |+++|.+ +. +|+||||+|+..++ .+++++||+ .|++++.+|.+|+||||+|+..+
T Consensus 70 ~g~~~~~~~ii~~Ll~~-gadin~~-~~~~g~TpLh~A~~~~~---~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~- 143 (169)
T PHA02741 70 KHEAQLAAEIIDHLIEL-GADINAQ-EMLEGDTALHLAAHRRD---HDLAEWLCCQPGIDLHFCNADNKSPFELAIDNE- 143 (169)
T ss_pred cCChHHHHHHHHHHHHc-CCCCCCC-CcCCCCCHHHHHHHcCC---HHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC-
Confidence 999 5899999999 9999998 64 89999999999999 999999998 59999999999999999999974
Q ss_pred CCCHHHHHHHHHHCCCCC
Q 004887 184 VPDSRVSLEDLLKNGGSV 201 (725)
Q Consensus 184 ~e~~~~ivelLL~~Gadv 201 (725)
..+++++|++.++..
T Consensus 144 ---~~~iv~~L~~~~~~~ 158 (169)
T PHA02741 144 ---DVAMMQILREIVATS 158 (169)
T ss_pred ---CHHHHHHHHHHHHHh
Confidence 456999999887554
No 52
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.73 E-value=7.3e-18 Score=184.98 Aligned_cols=184 Identities=24% Similarity=0.210 Sum_probs=138.3
Q ss_pred ccCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCC-
Q 004887 2 VAVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASP- 72 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~- 72 (725)
.|+||.+|.+|.|+||-+ |++|+++|++||..|. +|+||||.|+..+|+.+....+.++..++......
T Consensus 63 ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~--e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~ 140 (527)
T KOG0505|consen 63 GASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDN--EGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGN 140 (527)
T ss_pred CCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCcccccc--ccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCC
Confidence 378999999999999988 8999999999999999 99999999999999888555555554443332211
Q ss_pred --CCCCCc--cchhH--------------------------HHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhc
Q 004887 73 --PSKPSL--QRNMI--------------------------GLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSL 122 (725)
Q Consensus 73 --~~~~~~--~~~~~--------------------------~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~ 122 (725)
...... ..++. ..|+..+...+.....|.|.||+|+.+|..++.++||+.
T Consensus 141 ~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~a 220 (527)
T KOG0505|consen 141 MPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQA 220 (527)
T ss_pred CccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHh
Confidence 000000 01111 111121211122224589999999999999999999999
Q ss_pred CCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHC
Q 004887 123 TKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKN 197 (725)
Q Consensus 123 ~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~ 197 (725)
|.+++.+ |.+||||||.|+..|. .+++++|+++|++++..+..|.||+++|..- ....++++.++
T Consensus 221 -g~~~~~~-D~dgWtPlHAAA~Wg~---~~~~elL~~~ga~~d~~t~~g~~p~dv~dee-----~~~l~eLe~k~ 285 (527)
T KOG0505|consen 221 -GYSVNIK-DYDGWTPLHAAAHWGQ---EDACELLVEHGADMDAKTKMGETPLDVADEE-----ELYLLELELKQ 285 (527)
T ss_pred -ccCcccc-cccCCCcccHHHHhhh---HhHHHHHHHhhcccchhhhcCCCCccchhhh-----hHHHHHHHHHH
Confidence 9999999 9999999999999999 9999999999999999999999999998762 22455555544
No 53
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.73 E-value=2.7e-18 Score=180.16 Aligned_cols=157 Identities=27% Similarity=0.245 Sum_probs=128.2
Q ss_pred CccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHh-hCCchhhhcCCChHHHHH
Q 004887 29 NVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSF-QRLSKKIVLQHRTPLMVA 107 (725)
Q Consensus 29 DVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~-~~g~~~~~~~G~TPLh~A 107 (725)
-||..|. +|+|+||||+.+.++.++. +++.. -++++..+.-|+||+|+|
T Consensus 260 vVNlaDs--NGNTALHYsVSHaNF~VV~----------------------------~LLDSgvC~VD~qNrAGYtpiMLa 309 (452)
T KOG0514|consen 260 VVNLADS--NGNTALHYAVSHANFDVVS----------------------------ILLDSGVCDVDQQNRAGYTPVMLA 309 (452)
T ss_pred HhhhhcC--CCCeeeeeeecccchHHHH----------------------------HHhccCcccccccccccccHHHHH
Confidence 3678887 9999999999766555532 22222 245566678899999999
Q ss_pred HHc-----CCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCC
Q 004887 108 AEY-----GSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHP 182 (725)
Q Consensus 108 a~~-----G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g 182 (725)
+.. .+.++|..|... .|||++-...|+|+|++|+.+|+ +++|+.||..|||+|++|.+|-|+|+.|+.+
T Consensus 310 ALA~lk~~~d~~vV~~LF~m--gnVNaKAsQ~gQTALMLAVSHGr---~d~vk~LLacgAdVNiQDdDGSTALMCA~EH- 383 (452)
T KOG0514|consen 310 ALAKLKQPADRTVVERLFKM--GDVNAKASQHGQTALMLAVSHGR---VDMVKALLACGADVNIQDDDGSTALMCAAEH- 383 (452)
T ss_pred HHHhhcchhhHHHHHHHHhc--cCcchhhhhhcchhhhhhhhcCc---HHHHHHHHHccCCCccccCCccHHHhhhhhh-
Confidence 864 467899999876 68888867899999999999999 9999999999999999999999999999998
Q ss_pred CCCCHHHHHHHHHHC-CCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCcc
Q 004887 183 NVPDSRVSLEDLLKN-GGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPID 252 (725)
Q Consensus 183 ~~e~~~~ivelLL~~-Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd 252 (725)
++++|+++||.. ++|+. +.|.+|-|+|.+|.+.||.+|.
T Consensus 384 ---GhkEivklLLA~p~cd~s----------------------------LtD~DgSTAl~IAleagh~eIa 423 (452)
T KOG0514|consen 384 ---GHKEIVKLLLAVPSCDIS----------------------------LTDVDGSTALSIALEAGHREIA 423 (452)
T ss_pred ---ChHHHHHHHhccCcccce----------------------------eecCCCchhhhhHHhcCchHHH
Confidence 555699999975 46665 4556666789999999999985
No 54
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.72 E-value=1.1e-17 Score=165.44 Aligned_cols=169 Identities=21% Similarity=0.184 Sum_probs=136.5
Q ss_pred cCCccCCCCCCcHHHHHH------HHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCC
Q 004887 3 AVPAVTMRNKSSPLKISI------SIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKP 76 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiAv------klLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~ 76 (725)
+..|-.+-.+.+|++++| ..++.....||..|+ .|.|||++|+.+|++.++
T Consensus 120 ~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN~~De--~GfTpLiWAaa~G~i~vV--------------------- 176 (296)
T KOG0502|consen 120 ARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVNACDE--FGFTPLIWAAAKGHIPVV--------------------- 176 (296)
T ss_pred ccCCccccccCChhhHHHHHHHHHHHHHHhhccccCccc--cCchHhHHHHhcCchHHH---------------------
Confidence 345666777899999992 233445678999999 999999999987666553
Q ss_pred CccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHH
Q 004887 77 SLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKL 156 (725)
Q Consensus 77 ~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVkl 156 (725)
.+++.-+.+.....+...|+|++|+..|..+||++||++ ++|||.. |.+|.|||-||++.++ ++||+.
T Consensus 177 -------~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r-~vdVNvy-DwNGgTpLlyAvrgnh---vkcve~ 244 (296)
T KOG0502|consen 177 -------QFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTR-EVDVNVY-DWNGGTPLLYAVRGNH---VKCVES 244 (296)
T ss_pred -------HHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhc-CCCccee-ccCCCceeeeeecCCh---HHHHHH
Confidence 355555556666667889999999999999999999999 9999999 9999999999999999 999999
Q ss_pred HHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccc
Q 004887 157 LLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSV 211 (725)
Q Consensus 157 LL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp 211 (725)
||..|||++..|..|++++++|+..|. + +|+..|++-+.....|....+|
T Consensus 245 Ll~sGAd~t~e~dsGy~~mdlAValGy----r-~Vqqvie~h~lkl~Q~~~~~~~ 294 (296)
T KOG0502|consen 245 LLNSGADVTQEDDSGYWIMDLAVALGY----R-IVQQVIEKHALKLCQDSEKRTP 294 (296)
T ss_pred HHhcCCCcccccccCCcHHHHHHHhhh----H-HHHHHHHHHHHHHhhcccCCCC
Confidence 999999999999999999999999743 3 6666666655555444444433
No 55
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.72 E-value=3.1e-17 Score=161.08 Aligned_cols=138 Identities=12% Similarity=0.040 Sum_probs=115.9
Q ss_pred cCCccCCCCCCcHHHHH------------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCC
Q 004887 3 AVPAVTMRNKSSPLKIS------------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSA 70 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiA------------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa 70 (725)
+|++..+.++.++||.| +++|+++|++++.+|. .|+||||+|+..++.+..
T Consensus 11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~--~g~t~Lh~Aa~~g~~~~~--------------- 73 (166)
T PHA02743 11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDH--HGRQCTHMVAWYDRANAV--------------- 73 (166)
T ss_pred hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCC--CCCcHHHHHHHhCccCHH---------------
Confidence 57777899999999988 3357789999999998 999999999976543321
Q ss_pred CCCCCCCccchhHHHHHHhhCCchhhh-cCCChHHHHHHHcCCHHHHHHHHh-cCCCCcccccCCCCchHHHHHHhCCCC
Q 004887 71 SPPSKPSLQRNMIGLWYSFQRLSKKIV-LQHRTPLMVAAEYGSVDVVKLILS-LTKADVNLTCGLDKSTALHCAASGGSV 148 (725)
Q Consensus 71 ~~~~~~~~~~~~~~L~~a~~~g~~~~~-~~G~TPLh~Aa~~G~~eiVk~LLe-~~GadVN~~~d~~G~TpLH~Aa~~G~~ 148 (725)
..+.+++..+.+++..+ ..|.||||+|+..|+.+++++|+. . |++++.+ +..|.||||+|+..++
T Consensus 74 ----------~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~-gad~~~~-d~~g~tpL~~A~~~~~- 140 (166)
T PHA02743 74 ----------MKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQL-GVNLGAI-NYQHETAYHIAYKMRD- 140 (166)
T ss_pred ----------HHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhcc-CCCccCc-CCCCCCHHHHHHHcCC-
Confidence 11234555566666666 479999999999999999999996 6 9999999 9999999999999999
Q ss_pred CHHHHHHHHHHCCCCCCCcCCCCC
Q 004887 149 NAVDVVKLLLFAGADSNLTDAHGN 172 (725)
Q Consensus 149 ~~~eiVklLL~~GADin~~D~~G~ 172 (725)
.+++++|+++|++++.++..|.
T Consensus 141 --~~iv~~Ll~~ga~~~~~~~~~~ 162 (166)
T PHA02743 141 --RRMMEILRANGAVCDDPLSIGL 162 (166)
T ss_pred --HHHHHHHHHcCCCCCCcccCCc
Confidence 9999999999999999998875
No 56
>PHA02741 hypothetical protein; Provisional
Probab=99.72 E-value=7e-18 Score=165.96 Aligned_cols=129 Identities=18% Similarity=0.183 Sum_probs=108.7
Q ss_pred hhhcCCChHHHHHHHcCCHHHHHHHHhc-----CCCCcccccCCCCchHHHHHHhCCCCC-HHHHHHHHHHCCCCCCCcC
Q 004887 95 KIVLQHRTPLMVAAEYGSVDVVKLILSL-----TKADVNLTCGLDKSTALHCAASGGSVN-AVDVVKLLLFAGADSNLTD 168 (725)
Q Consensus 95 ~~~~~G~TPLh~Aa~~G~~eiVk~LLe~-----~GadVN~~~d~~G~TpLH~Aa~~G~~~-~~eiVklLL~~GADin~~D 168 (725)
..+..|.|+||+|+..|+.+++++|+.. .|+++|.+ |..|.||||+|+..|+.. ..+++++|++.|+++|.+|
T Consensus 16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~ 94 (169)
T PHA02741 16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQE 94 (169)
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCC
Confidence 3457899999999999999999998643 16899999 999999999999999721 1388999999999999998
Q ss_pred C-CCCcHHHHHHhCCCCCCHHHHHHHHHH-CCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccC
Q 004887 169 A-HGNRPFDVIVVHPNVPDSRVSLEDLLK-NGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEK 246 (725)
Q Consensus 169 ~-~G~TPLhlA~~~g~~e~~~~ivelLL~-~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~ 246 (725)
. +|+||||+|+..+ ..+++++|++ .|++++. ++..|.||||+|+..
T Consensus 95 ~~~g~TpLh~A~~~~----~~~iv~~Ll~~~g~~~~~----------------------------~n~~g~tpL~~A~~~ 142 (169)
T PHA02741 95 MLEGDTALHLAAHRR----DHDLAEWLCCQPGIDLHF----------------------------CNADNKSPFELAIDN 142 (169)
T ss_pred cCCCCCHHHHHHHcC----CHHHHHHHHhCCCCCCCc----------------------------CCCCCCCHHHHHHHC
Confidence 5 9999999999985 4459999998 5888874 566777889999999
Q ss_pred CCcCccCCCC
Q 004887 247 KEYPIDPSLP 256 (725)
Q Consensus 247 g~~~vd~~Lp 256 (725)
++.+++..|.
T Consensus 143 ~~~~iv~~L~ 152 (169)
T PHA02741 143 EDVAMMQILR 152 (169)
T ss_pred CCHHHHHHHH
Confidence 9888875444
No 57
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.66 E-value=2.1e-16 Score=168.69 Aligned_cols=112 Identities=24% Similarity=0.221 Sum_probs=93.6
Q ss_pred hhhcCCCh-HHHHHHHcCCHHHHHHHHhcCCCCccccc---CCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCc-CC
Q 004887 95 KIVLQHRT-PLMVAAEYGSVDVVKLILSLTKADVNLTC---GLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLT-DA 169 (725)
Q Consensus 95 ~~~~~G~T-PLh~Aa~~G~~eiVk~LLe~~GadVN~~~---d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~-D~ 169 (725)
..+..|+| +||.|+.+|+.+++++||++ |+|+|.+. +..|.||||+|+..|+ .+++++|+++|||+|.+ +.
T Consensus 27 ~~d~~~~~~lL~~A~~~~~~eivk~LL~~-GAdiN~~~~~sd~~g~TpLh~Aa~~~~---~eivklLL~~GADVN~~~~~ 102 (300)
T PHA02884 27 KKNKICIANILYSSIKFHYTDIIDAILKL-GADPEAPFPLSENSKTNPLIYAIDCDN---DDAAKLLIRYGADVNRYAEE 102 (300)
T ss_pred ccCcCCCCHHHHHHHHcCCHHHHHHHHHC-CCCccccCcccCCCCCCHHHHHHHcCC---HHHHHHHHHcCCCcCcccCC
Confidence 34556666 56677778999999999999 99999872 3589999999999999 99999999999999997 46
Q ss_pred CCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccc
Q 004887 170 HGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLR 214 (725)
Q Consensus 170 ~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ 214 (725)
.|.||||+|+..+ ..+++++|+.+|++++.+|..|.||++.
T Consensus 103 ~g~TpLh~Aa~~~----~~eivklLL~~GAdin~kd~~G~TpL~~ 143 (300)
T PHA02884 103 AKITPLYISVLHG----CLKCLEILLSYGADINIQTNDMVTPIEL 143 (300)
T ss_pred CCCCHHHHHHHcC----CHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 8999999999974 4569999999999999766555555443
No 58
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.65 E-value=2.3e-16 Score=152.37 Aligned_cols=131 Identities=9% Similarity=0.063 Sum_probs=101.7
Q ss_pred CccCCCCCCcHHHHH------HHHHHHCCCC-------ccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCC
Q 004887 5 PAVTMRNKSSPLKIS------ISIFQKHTQN-------VFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSAS 71 (725)
Q Consensus 5 pdv~d~~G~TPLhiA------vklLL~~GAD-------VN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~ 71 (725)
++..|.+|.||||+| +++|...+.. ++.+|. +|+||||+|+..++...
T Consensus 10 ~~~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~--~g~t~Lh~a~~~~~~~~----------------- 70 (154)
T PHA02736 10 ASEPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNR--HGKQCVHIVSNPDKADP----------------- 70 (154)
T ss_pred HHhcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcC--CCCEEEEeecccCchhH-----------------
Confidence 456788999999999 3344333332 234566 89999999996544321
Q ss_pred CCCCCCccchhHHHHHHhhCCchhhh-cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCH
Q 004887 72 PPSKPSLQRNMIGLWYSFQRLSKKIV-LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNA 150 (725)
Q Consensus 72 ~~~~~~~~~~~~~L~~a~~~g~~~~~-~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~ 150 (725)
...+.+++..+.+.+..+ ..|.||||+|+..|+.+++++||...|+++|.+ +..|.||||+|+..|+
T Consensus 71 --------~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~-~~~g~tpL~~A~~~~~--- 138 (154)
T PHA02736 71 --------QEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEIL-NYAFKTPYYVACERHD--- 138 (154)
T ss_pred --------HHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccc-cCCCCCHHHHHHHcCC---
Confidence 112335555666667666 489999999999999999999998449999999 9999999999999999
Q ss_pred HHHHHHHHHCCCCCCC
Q 004887 151 VDVVKLLLFAGADSNL 166 (725)
Q Consensus 151 ~eiVklLL~~GADin~ 166 (725)
.+++++|++.|+++++
T Consensus 139 ~~i~~~Ll~~ga~~~~ 154 (154)
T PHA02736 139 AKMMNILRAKGAQCKV 154 (154)
T ss_pred HHHHHHHHHcCCCCCC
Confidence 9999999999998763
No 59
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.65 E-value=5.9e-17 Score=186.49 Aligned_cols=243 Identities=17% Similarity=0.082 Sum_probs=153.6
Q ss_pred cCCccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCC
Q 004887 3 AVPAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPS 74 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~ 74 (725)
|++..+|+.|.+||.+| |+.|+++.+||.... |..+.|+|-+||..|..++ .+.+|..++..
T Consensus 781 aniehrdkkgf~plImaatagh~tvV~~llk~ha~veaQs-drtkdt~lSlacsggr~~v-------velLl~~gank-- 850 (2131)
T KOG4369|consen 781 ANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQS-DRTKDTMLSLACSGGRTRV-------VELLLNAGANK-- 850 (2131)
T ss_pred ccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhc-ccccCceEEEecCCCcchH-------HHHHHHhhccc--
Confidence 56666666666666666 666666666666655 4566666666664444433 22222222210
Q ss_pred CCCccchhHHHHHHhhCCchhhh----------------cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchH
Q 004887 75 KPSLQRNMIGLWYSFQRLSKKIV----------------LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTA 138 (725)
Q Consensus 75 ~~~~~~~~~~L~~a~~~g~~~~~----------------~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~Tp 138 (725)
....-.+.+||-+++..++.+++ +.|..||++|.++||.+.++.||+. |.|||+....+.+|+
T Consensus 851 ehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~-gsdiNaqIeTNrnTa 929 (2131)
T KOG4369|consen 851 EHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQP-GSDINAQIETNRNTA 929 (2131)
T ss_pred cccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcc-cchhccccccccccc
Confidence 00011223333333333322222 5678888888888888888888887 888888766777888
Q ss_pred HHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccc--cccccccccc
Q 004887 139 LHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDEL--QVSSVDLRSS 216 (725)
Q Consensus 139 LH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~--~g~Tp~~~as 216 (725)
|-+|+..|. .++|.+||.+.+++..+-+.|.|||+-++..| +.++-++||..|+|+|..-. .-.|++-...
T Consensus 930 ltla~fqgr---~evv~lLLa~~anvehRaktgltplme~AsgG----yvdvg~~li~~gad~nasPvp~T~dtalti~a 1002 (2131)
T KOG4369|consen 930 LTLALFQGR---PEVVFLLLAAQANVEHRAKTGLTPLMEMASGG----YVDVGNLLIAAGADTNASPVPNTWDTALTIPA 1002 (2131)
T ss_pred eeeccccCc---chHHHHHHHHhhhhhhhcccCCcccchhhcCC----ccccchhhhhcccccccCCCCCcCCccceeec
Confidence 888888888 88888888888888888888888888888764 44488888888888875322 1112222222
Q ss_pred c-CCCCCCCC----CCCccccccCCCCcccccccCCCcCccCCCCccccccc
Q 004887 217 S-SLSSSSDD----SSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDIKDSIY 263 (725)
Q Consensus 217 s-~ls~s~~~----~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi~~~iy 263 (725)
. +.....+. ...+++.|++|.|+|.+|+..|++.+.+.|.+-..++-
T Consensus 1003 ~kGh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d 1054 (2131)
T KOG4369|consen 1003 NKGHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADAD 1054 (2131)
T ss_pred CCCchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChh
Confidence 2 11111111 34678899999999999999999999887766544443
No 60
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.65 E-value=1.1e-15 Score=133.63 Aligned_cols=89 Identities=37% Similarity=0.568 Sum_probs=81.1
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCC
Q 004887 104 LMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPN 183 (725)
Q Consensus 104 Lh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~ 183 (725)
||+||..|+.+++++|++. +.+++. |.||||+|+..|+ .+++++|++.|++++.+|.+|+||||+|+..
T Consensus 1 L~~A~~~~~~~~~~~ll~~-~~~~~~-----~~~~l~~A~~~~~---~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-- 69 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEK-GADINL-----GNTALHYAAENGN---LEIVKLLLENGADINSQDKNGNTALHYAAEN-- 69 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHT-TSTTTS-----SSBHHHHHHHTTT---HHHHHHHHHTTTCTT-BSTTSSBHHHHHHHT--
T ss_pred CHHHHHcCCHHHHHHHHHC-cCCCCC-----CCCHHHHHHHcCC---HHHHHHHHHhcccccccCCCCCCHHHHHHHc--
Confidence 7999999999999999998 888775 8899999999999 9999999999999999999999999999997
Q ss_pred CCCHHHHHHHHHHCCCCCCCcc
Q 004887 184 VPDSRVSLEDLLKNGGSVSFDE 205 (725)
Q Consensus 184 ~e~~~~ivelLL~~Gadvn~~d 205 (725)
+..+++++|+++|++++.+|
T Consensus 70 --~~~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 70 --GNLEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp --THHHHHHHHHHTTT-TTSS-
T ss_pred --CCHHHHHHHHHcCCCCCCcC
Confidence 66679999999999999865
No 61
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.64 E-value=5.6e-16 Score=185.64 Aligned_cols=194 Identities=15% Similarity=0.054 Sum_probs=135.1
Q ss_pred ccCCccCCCCCCcHHH-HH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCC--
Q 004887 2 VAVPAVTMRNKSSPLK-IS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSA-- 70 (725)
Q Consensus 2 ~Adpdv~d~~G~TPLh-iA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa-- 70 (725)
.+|+|..|..|+|||| +| +++|+++|+ .+. .|.||||.|+..++..+ . .+...++....
T Consensus 42 ~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~--~G~T~Lh~A~~~~~~~v-~---~ll~~l~~~~~~~ 111 (743)
T TIGR00870 42 KLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGA--VGDTLLHAISLEYVDAV-E---AILLHLLAAFRKS 111 (743)
T ss_pred ccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCC--cChHHHHHHHhccHHHH-H---HHHHHHhhccccc
Confidence 3578999999999999 66 788999987 454 89999999996322211 0 01000000000
Q ss_pred ------CCCCCCCccchhHHHHHHhhCCchhhh----------------------------cCCChHHHHHHHcCCHHHH
Q 004887 71 ------SPPSKPSLQRNMIGLWYSFQRLSKKIV----------------------------LQHRTPLMVAAEYGSVDVV 116 (725)
Q Consensus 71 ------~~~~~~~~~~~~~~L~~a~~~g~~~~~----------------------------~~G~TPLh~Aa~~G~~eiV 116 (725)
..........+.+|||+|+..+..+++ ..|.||||+|+..|+.+++
T Consensus 112 ~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv 191 (743)
T TIGR00870 112 GPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIV 191 (743)
T ss_pred CchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHH
Confidence 000011123467777777766555543 2489999999999999999
Q ss_pred HHHHhcCCCCcccccCCCCchHHHHHHhCCCCC------HHHHHHHHHHCCCCC-------CCcCCCCCcHHHHHHhCCC
Q 004887 117 KLILSLTKADVNLTCGLDKSTALHCAASGGSVN------AVDVVKLLLFAGADS-------NLTDAHGNRPFDVIVVHPN 183 (725)
Q Consensus 117 k~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~------~~eiVklLL~~GADi-------n~~D~~G~TPLhlA~~~g~ 183 (725)
++|++. |+|+|.+ |..|+||||+|+..+... ...+.+++++.++.. +..|.+|.||||+|+..|+
T Consensus 192 ~lLl~~-gadin~~-d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~ 269 (743)
T TIGR00870 192 ALLSED-PADILTA-DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGR 269 (743)
T ss_pred HHHhcC-CcchhhH-hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCC
Confidence 999999 9999999 999999999999987210 134566666665554 7789999999999999866
Q ss_pred CCCHHHHHHHHHHCCCCCCCcccccccc
Q 004887 184 VPDSRVSLEDLLKNGGSVSFDELQVSSV 211 (725)
Q Consensus 184 ~e~~~~ivelLL~~Gadvn~~d~~g~Tp 211 (725)
.+ ++++|++.+.+......+...+
T Consensus 270 ~~----l~~lLL~~~~~~kk~~a~~~~~ 293 (743)
T TIGR00870 270 IV----LFRLKLAIKYKQKKFVAWPNGQ 293 (743)
T ss_pred cc----HHHHHHHHHHhcceeeccCcch
Confidence 66 9999998765544433333333
No 62
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.62 E-value=8.9e-16 Score=168.70 Aligned_cols=189 Identities=16% Similarity=0.135 Sum_probs=123.5
Q ss_pred HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcC
Q 004887 20 ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQ 99 (725)
Q Consensus 20 vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~ 99 (725)
++.|+..|+++|..+. +|.|+||-+|.- .+..++++++..+++++..+.+
T Consensus 56 v~~ll~~ga~~~~~n~--DglTalhq~~id----------------------------~~~e~v~~l~e~ga~Vn~~d~e 105 (527)
T KOG0505|consen 56 VRKLLNRGASPNLCNV--DGLTALHQACID----------------------------DNLEMVKFLVENGANVNAQDNE 105 (527)
T ss_pred HHHHhccCCCccccCC--ccchhHHHHHhc----------------------------ccHHHHHHHHHhcCCccccccc
Confidence 8899999999999998 999999999932 3456777888999999999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCC------------CC-----------HHHHHHH
Q 004887 100 HRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGS------------VN-----------AVDVVKL 156 (725)
Q Consensus 100 G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~------------~~-----------~~eiVkl 156 (725)
|+||||.|+..|++.++++||.+ |+++-.. +.+|..|+-++..--. +. ..+=+..
T Consensus 106 ~wtPlhaaascg~~~i~~~li~~-gA~~~av-Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q 183 (527)
T KOG0505|consen 106 GWTPLHAAASCGYLNIVEYLIQH-GANLLAV-NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQ 183 (527)
T ss_pred cCCcchhhcccccHHHHHHHHHh-hhhhhhc-cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHH
Confidence 99999999999999999999999 8877655 5555444433211000 00 0001122
Q ss_pred HHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccccc-CCCCC----CCCCCCccc
Q 004887 157 LLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSS-SLSSS----SDDSSLSSL 231 (725)
Q Consensus 157 LL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass-~ls~s----~~~~~~~~~ 231 (725)
.+..|.+.++.+..|-|.||+|+.+ ++.+++++||..|.+++++|.+|+||+|.++. +.... .+++.+.++
T Consensus 184 ~l~~G~~~d~~~~rG~T~lHvAaa~----Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~ 259 (527)
T KOG0505|consen 184 WLNAGAELDARHARGATALHVAAAN----GYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDA 259 (527)
T ss_pred HHhccccccccccccchHHHHHHhh----hHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccch
Confidence 2335555555555555555555554 44445555555555555555555555555544 21111 112445556
Q ss_pred cccCCCCcccccc
Q 004887 232 TCKSDDVHAFVAP 244 (725)
Q Consensus 232 ~~~~G~TpL~~A~ 244 (725)
+.+.|.||+.+|.
T Consensus 260 ~t~~g~~p~dv~d 272 (527)
T KOG0505|consen 260 KTKMGETPLDVAD 272 (527)
T ss_pred hhhcCCCCccchh
Confidence 7777777777764
No 63
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.62 E-value=3.6e-16 Score=176.73 Aligned_cols=186 Identities=18% Similarity=0.158 Sum_probs=113.3
Q ss_pred CccCCCCCCcHHHHH--------HHHHHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCC
Q 004887 5 PAVTMRNKSSPLKIS--------ISIFQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKP 76 (725)
Q Consensus 5 pdv~d~~G~TPLhiA--------vklLL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~ 76 (725)
.|..|.+|.|.||.| +++|+++.+-++..|. .|.+|||+|+.+|+.++..
T Consensus 42 ~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~--kg~~plhlaaw~g~~e~vk-------------------- 99 (854)
T KOG0507|consen 42 HNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDT--KGILPLHLAAWNGNLEIVK-------------------- 99 (854)
T ss_pred ccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhc--cCcceEEehhhcCcchHHH--------------------
Confidence 345555667777666 5666666666666665 6677777776655544422
Q ss_pred CccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHH
Q 004887 77 SLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKL 156 (725)
Q Consensus 77 ~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVkl 156 (725)
+++....+.+....+|.||||.|+..|+.+++.+||.+ |+|+-.+ +..+.|+|-+|++.|. .++|++
T Consensus 100 --------mll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~-~adp~i~-nns~~t~ldlA~qfgr---~~Vvq~ 166 (854)
T KOG0507|consen 100 --------MLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKK-NADPFIR-NNSKETVLDLASRFGR---AEVVQM 166 (854)
T ss_pred --------HHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhc-CCCcccc-CcccccHHHHHHHhhh---hHHHHH
Confidence 22222233344445677777777777777777777777 7777666 6667777777777777 777777
Q ss_pred HHHCCCC--------CCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCC
Q 004887 157 LLFAGAD--------SNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSL 228 (725)
Q Consensus 157 LL~~GAD--------in~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~ 228 (725)
|+....+ -..++..+.+|||+|+++| ..++++.|+..|.++|...
T Consensus 167 ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakng----h~~~~~~ll~ag~din~~t----------------------- 219 (854)
T KOG0507|consen 167 LLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNG----HVECMQALLEAGFDINYTT----------------------- 219 (854)
T ss_pred HhhhccchhhcccCCCCCCCCCCcCCcchhhhcc----hHHHHHHHHhcCCCccccc-----------------------
Confidence 7654211 1233455667777777753 3347777777777776433
Q ss_pred ccccccCCCCcccccccCCCcCccCCCCcc
Q 004887 229 SSLTCKSDDVHAFVAPEKKEYPIDPSLPDI 258 (725)
Q Consensus 229 ~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi 258 (725)
+.| |+||.|+-.|..+|++.|.++
T Consensus 220 -----~~g-talheaalcgk~evvr~ll~~ 243 (854)
T KOG0507|consen 220 -----EDG-TALHEAALCGKAEVVRFLLEI 243 (854)
T ss_pred -----ccc-hhhhhHhhcCcchhhhHHHhh
Confidence 332 566666666666666666554
No 64
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.62 E-value=6.8e-16 Score=157.72 Aligned_cols=117 Identities=30% Similarity=0.309 Sum_probs=107.8
Q ss_pred CchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCC
Q 004887 92 LSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHG 171 (725)
Q Consensus 92 g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G 171 (725)
+.+.-|..|.+|||+||..|+..+|+.||.+ |+.||.. +....||||+|+.+|+ .+||+.||.+.+|+|++|..|
T Consensus 26 dln~gddhgfsplhwaakegh~aivemll~r-garvn~t-nmgddtplhlaaahgh---rdivqkll~~kadvnavnehg 100 (448)
T KOG0195|consen 26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSR-GARVNST-NMGDDTPLHLAAAHGH---RDIVQKLLSRKADVNAVNEHG 100 (448)
T ss_pred ccccccccCcchhhhhhhcccHHHHHHHHhc-ccccccc-cCCCCcchhhhhhccc---HHHHHHHHHHhcccchhhccC
Confidence 4444567899999999999999999999999 9999998 8888999999999999 999999999999999999999
Q ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCcccccccccccccc
Q 004887 172 NRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSS 217 (725)
Q Consensus 172 ~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass 217 (725)
+|||||||.- ++..|.+-|+..|+.+++.|+.|.||+..+..
T Consensus 101 ntplhyacfw----gydqiaedli~~ga~v~icnk~g~tpldkakp 142 (448)
T KOG0195|consen 101 NTPLHYACFW----GYDQIAEDLISCGAAVNICNKKGMTPLDKAKP 142 (448)
T ss_pred CCchhhhhhh----cHHHHHHHHHhccceeeecccCCCCchhhhch
Confidence 9999999986 77889999999999999999999999766554
No 65
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.60 E-value=7.6e-15 Score=156.83 Aligned_cols=99 Identities=23% Similarity=0.243 Sum_probs=85.3
Q ss_pred HHHHHHhhCCchhh----hcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHH
Q 004887 83 IGLWYSFQRLSKKI----VLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLL 158 (725)
Q Consensus 83 ~~L~~a~~~g~~~~----~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL 158 (725)
+.+++..+.+.+.. +..|.||||+|+..|+.+++++|+++ |+|+|.+.+..|.||||+|+..|+ .+++++|+
T Consensus 49 vk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~-GADVN~~~~~~g~TpLh~Aa~~~~---~eivklLL 124 (300)
T PHA02884 49 IDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRY-GADVNRYAEEAKITPLYISVLHGC---LKCLEILL 124 (300)
T ss_pred HHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcCcccCCCCCCHHHHHHHcCC---HHHHHHHH
Confidence 33555555555544 35899999999999999999999999 999998635689999999999999 99999999
Q ss_pred HCCCCCCCcCCCCCcHHHHHHhCCCCC
Q 004887 159 FAGADSNLTDAHGNRPFDVIVVHPNVP 185 (725)
Q Consensus 159 ~~GADin~~D~~G~TPLhlA~~~g~~e 185 (725)
+.|||++.+|..|.||||+|+..++.+
T Consensus 125 ~~GAdin~kd~~G~TpL~~A~~~~~~~ 151 (300)
T PHA02884 125 SYGADINIQTNDMVTPIELALMICNNF 151 (300)
T ss_pred HCCCCCCCCCCCCCCHHHHHHHhCChh
Confidence 999999999999999999999865443
No 66
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.57 E-value=3.7e-15 Score=152.33 Aligned_cols=142 Identities=25% Similarity=0.220 Sum_probs=116.6
Q ss_pred HHHCCCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCCh
Q 004887 23 FQKHTQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRT 102 (725)
Q Consensus 23 LL~~GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~T 102 (725)
|-+..-|.|.-|. .|.+|||+||+.|+..+. ..++.++..++..+....|
T Consensus 20 ld~tehdln~gdd--hgfsplhwaakegh~aiv----------------------------emll~rgarvn~tnmgddt 69 (448)
T KOG0195|consen 20 LDDTEHDLNVGDD--HGFSPLHWAAKEGHVAIV----------------------------EMLLSRGARVNSTNMGDDT 69 (448)
T ss_pred ecCcccccccccc--cCcchhhhhhhcccHHHH----------------------------HHHHhcccccccccCCCCc
Confidence 3345668888887 999999999976655443 2444555566666667789
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCC
Q 004887 103 PLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHP 182 (725)
Q Consensus 103 PLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g 182 (725)
|||+|+..||-+||+.||++ .+|||+. +..|+|||||||..|. ..|++-|+..||-+++.|++|.|||+.|.-.
T Consensus 70 plhlaaahghrdivqkll~~-kadvnav-nehgntplhyacfwgy---dqiaedli~~ga~v~icnk~g~tpldkakp~- 143 (448)
T KOG0195|consen 70 PLHLAAAHGHRDIVQKLLSR-KADVNAV-NEHGNTPLHYACFWGY---DQIAEDLISCGAAVNICNKKGMTPLDKAKPM- 143 (448)
T ss_pred chhhhhhcccHHHHHHHHHH-hcccchh-hccCCCchhhhhhhcH---HHHHHHHHhccceeeecccCCCCchhhhchH-
Confidence 99999999999999999999 9999999 9999999999999999 9999999999999999999999999998652
Q ss_pred CCCCHHHHHHHHHHCCCCCCC
Q 004887 183 NVPDSRVSLEDLLKNGGSVSF 203 (725)
Q Consensus 183 ~~e~~~~ivelLL~~Gadvn~ 203 (725)
....+.++.-++|-+++.
T Consensus 144 ---l~~~l~e~aek~gq~~nr 161 (448)
T KOG0195|consen 144 ---LKNTLLEIAEKHGQSPNR 161 (448)
T ss_pred ---HHHHHHHHHHHhCCCCCc
Confidence 334455555567777763
No 67
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.57 E-value=1.5e-14 Score=138.79 Aligned_cols=113 Identities=25% Similarity=0.155 Sum_probs=62.8
Q ss_pred hhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCc
Q 004887 94 KKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNR 173 (725)
Q Consensus 94 ~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~T 173 (725)
+..|.+|.||||-|+.+|+.+||+.||.. |++++++ ...||||||-||...+ .+++-+||.+|||+|+......|
T Consensus 91 NtrD~D~YTpLHRAaYn~h~div~~ll~~-gAn~~a~-T~~GWTPLhSAckWnN---~~va~~LLqhgaDVnA~t~g~lt 165 (228)
T KOG0512|consen 91 NTRDEDEYTPLHRAAYNGHLDIVHELLLS-GANKEAK-TNEGWTPLHSACKWNN---FEVAGRLLQHGADVNAQTKGLLT 165 (228)
T ss_pred cccccccccHHHHHHhcCchHHHHHHHHc-cCCcccc-cccCccchhhhhcccc---hhHHHHHHhccCcccccccccch
Confidence 33445566666666666666666666655 6666665 5566666666666555 56666666666666665555556
Q ss_pred HHHHHHhCCCCCCHHHHHHHHH-HCCCCCCCccccccccccc
Q 004887 174 PFDVIVVHPNVPDSRVSLEDLL-KNGGSVSFDELQVSSVDLR 214 (725)
Q Consensus 174 PLhlA~~~g~~e~~~~ivelLL-~~Gadvn~~d~~g~Tp~~~ 214 (725)
|||+|+... ..+..+++|+ ..+.+...++..+.|+...
T Consensus 166 pLhlaa~~r---n~r~t~~~Ll~dryi~pg~~nn~eeta~~i 204 (228)
T KOG0512|consen 166 PLHLAAGNR---NSRDTLELLLHDRYIHPGLKNNLEETAFDI 204 (228)
T ss_pred hhHHhhccc---chHHHHHHHhhccccChhhhcCccchHHHH
Confidence 666665542 2333444433 2345555555555555443
No 68
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.57 E-value=2.2e-15 Score=170.47 Aligned_cols=170 Identities=20% Similarity=0.166 Sum_probs=136.6
Q ss_pred CccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHH
Q 004887 29 NVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAA 108 (725)
Q Consensus 29 DVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa 108 (725)
.+|..|. +|.|+||.|+.+|+..+.. |++....-...++.+|.+|||+|+
T Consensus 41 s~n~qd~--~gfTalhha~Lng~~~is~----------------------------llle~ea~ldl~d~kg~~plhlaa 90 (854)
T KOG0507|consen 41 SHNLQDY--SGFTLLHHAVLNGQNQISK----------------------------LLLDYEALLDLCDTKGILPLHLAA 90 (854)
T ss_pred cccccCc--cchhHHHHHHhcCchHHHH----------------------------HHhcchhhhhhhhccCcceEEehh
Confidence 5666666 9999999999876665532 333333334444578999999999
Q ss_pred HcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHH
Q 004887 109 EYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSR 188 (725)
Q Consensus 109 ~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~ 188 (725)
..|+.++||+||.. +..+|+. ...|.||||.||+.|+ .++|.+||.+|+|+-++|+.+.|+|++|++.|..+
T Consensus 91 w~g~~e~vkmll~q-~d~~na~-~~e~~tplhlaaqhgh---~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~--- 162 (854)
T KOG0507|consen 91 WNGNLEIVKMLLLQ-TDILNAV-NIENETPLHLAAQHGH---LEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAE--- 162 (854)
T ss_pred hcCcchHHHHHHhc-ccCCCcc-cccCcCccchhhhhcc---hHHHHHHHhcCCCccccCcccccHHHHHHHhhhhH---
Confidence 99999999999999 8999999 8999999999999999 99999999999999999999999999999985554
Q ss_pred HHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCCc
Q 004887 189 VSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPD 257 (725)
Q Consensus 189 ~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpd 257 (725)
+++.|+.....+...+..| .+.+.-.+-+|||+|+++||.++...|..
T Consensus 163 -Vvq~ll~~~~~~~~~~~~~--------------------~~~~~~~~~~plHlaakngh~~~~~~ll~ 210 (854)
T KOG0507|consen 163 -VVQMLLQKKFPVQSSLRVG--------------------DIKRPFPAIYPLHLAAKNGHVECMQALLE 210 (854)
T ss_pred -HHHHHhhhccchhhcccCC--------------------CCCCCCCCcCCcchhhhcchHHHHHHHHh
Confidence 9999998833332211111 23566678899999999999999766643
No 69
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.56 E-value=7.1e-15 Score=168.36 Aligned_cols=120 Identities=23% Similarity=0.262 Sum_probs=107.8
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCccccc--------C--------------CCCchHHHHHHhCCCCCHHHHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTC--------G--------------LDKSTALHCAASGGSVNAVDVVK 155 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~--------d--------------~~G~TpLH~Aa~~G~~~~~eiVk 155 (725)
..|.||||+|+.+.+.++|++||+. |||||+++ | +.|..||-+||..++ .||++
T Consensus 182 Y~GqSaLHiAIv~~~~~~V~lLl~~-gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq---~eivr 257 (782)
T KOG3676|consen 182 YYGQSALHIAIVNRDAELVRLLLAA-GADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQ---PEIVR 257 (782)
T ss_pred hcCcchHHHHHHhccHHHHHHHHHc-CCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCC---HHHHH
Confidence 6799999999999999999999999 99999864 1 247789999999999 99999
Q ss_pred HHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCC--CCCccccccccccccccCCCCCCCCCCCccccc
Q 004887 156 LLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGS--VSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTC 233 (725)
Q Consensus 156 lLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gad--vn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~ 233 (725)
+|+++|||++++|.+|+|.||..+.. ...++..++|.+|++ .. +.|
T Consensus 258 lLl~~gAd~~aqDS~GNTVLH~lVi~----~~~~My~~~L~~ga~~l~~----------------------------v~N 305 (782)
T KOG3676|consen 258 LLLAHGADPNAQDSNGNTVLHMLVIH----FVTEMYDLALELGANALEH----------------------------VRN 305 (782)
T ss_pred HHHhcCCCCCccccCCChHHHHHHHH----HHHHHHHHHHhcCCCcccc----------------------------ccc
Confidence 99999999999999999999999986 677799999999999 32 677
Q ss_pred cCCCCcccccccCCCcCccC
Q 004887 234 KSDDVHAFVAPEKKEYPIDP 253 (725)
Q Consensus 234 ~~G~TpL~~A~e~g~~~vd~ 253 (725)
+.|-|||.+|++.|..+|-.
T Consensus 306 ~qgLTPLtLAaklGk~emf~ 325 (782)
T KOG3676|consen 306 NQGLTPLTLAAKLGKKEMFQ 325 (782)
T ss_pred cCCCChHHHHHHhhhHHHHH
Confidence 88889999999999988754
No 70
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.56 E-value=7.2e-15 Score=140.95 Aligned_cols=138 Identities=24% Similarity=0.233 Sum_probs=116.2
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCC
Q 004887 103 PLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHP 182 (725)
Q Consensus 103 PLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g 182 (725)
-+.+|+..+.+..|+.||+...--||.+ |.+|.||||-|+.+|+ .+||+.||..||+++.+...||||||-||.-.
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vNtr-D~D~YTpLHRAaYn~h---~div~~ll~~gAn~~a~T~~GWTPLhSAckWn 141 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVNTR-DEDEYTPLHRAAYNGH---LDIVHELLLSGANKEAKTNEGWTPLHSACKWN 141 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhcccccccc-ccccccHHHHHHhcCc---hHHHHHHHHccCCcccccccCccchhhhhccc
Confidence 4678999999999999999834458999 9999999999999999 99999999999999999999999999999985
Q ss_pred CCCCHHHHHHHHHHCCCCCCCcccccccccccccc-CCCCC-----C-CCCCCccccccCCCCcccccccCCC
Q 004887 183 NVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSS-SLSSS-----S-DDSSLSSLTCKSDDVHAFVAPEKKE 248 (725)
Q Consensus 183 ~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass-~ls~s-----~-~~~~~~~~~~~~G~TpL~~A~e~g~ 248 (725)
+.+ ++-+||.+|+|||.......||++.+.- .-... + .-......++..+.||+.+|-+-+.
T Consensus 142 N~~----va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~ 210 (228)
T KOG0512|consen 142 NFE----VAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM 210 (228)
T ss_pred chh----HHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence 555 9999999999999999999999997655 21111 1 1133556888899999999965543
No 71
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.54 E-value=6.6e-15 Score=169.91 Aligned_cols=167 Identities=21% Similarity=0.164 Sum_probs=95.6
Q ss_pred cchhHHHHHHhhCCchhhh-cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHH
Q 004887 79 QRNMIGLWYSFQRLSKKIV-LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLL 157 (725)
Q Consensus 79 ~~~~~~L~~a~~~g~~~~~-~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklL 157 (725)
+...+.+++.-+.+++..+ .+.+|+|-+|+..|+.++|.+||.+ .++|..+ -+.|.|||+-++.+|. +|+=++|
T Consensus 904 h~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~-~anvehR-aktgltplme~AsgGy---vdvg~~l 978 (2131)
T KOG4369|consen 904 HQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAA-QANVEHR-AKTGLTPLMEMASGGY---VDVGNLL 978 (2131)
T ss_pred ccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHH-hhhhhhh-cccCCcccchhhcCCc---cccchhh
Confidence 3344444444444444333 3455666666666666666666665 5666555 5566666666666666 6666666
Q ss_pred HHCCCCCCCc--CCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCC-----CCCCCCcc
Q 004887 158 LFAGADSNLT--DAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSS-----SDDSSLSS 230 (725)
Q Consensus 158 L~~GADin~~--D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s-----~~~~~~~~ 230 (725)
|++|||+|.- -..-.|+|.+++..||. +.+++|+...+.+..+|+.|.|++..++.++..+ .+...+++
T Consensus 979 i~~gad~nasPvp~T~dtalti~a~kGh~----kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d 1054 (2131)
T KOG4369|consen 979 IAAGADTNASPVPNTWDTALTIPANKGHT----KFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADAD 1054 (2131)
T ss_pred hhcccccccCCCCCcCCccceeecCCCch----hhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChh
Confidence 6666665543 12233555555555333 3666666666666666666666655444421111 11244556
Q ss_pred ccccCCCCcccccccCCCcCccCC
Q 004887 231 LTCKSDDVHAFVAPEKKEYPIDPS 254 (725)
Q Consensus 231 ~~~~~G~TpL~~A~e~g~~~vd~~ 254 (725)
..+..-.++++-|.+|||+.|++.
T Consensus 1055 ~qdnr~~S~~maafRKgh~~iVk~ 1078 (2131)
T KOG4369|consen 1055 QQDNRTNSRTMAAFRKGHFAIVKK 1078 (2131)
T ss_pred hhhcccccccHHHHHhchhheecc
Confidence 677777788899999999999774
No 72
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.49 E-value=8.6e-14 Score=125.84 Aligned_cols=119 Identities=37% Similarity=0.460 Sum_probs=104.2
Q ss_pred hcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHH
Q 004887 97 VLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFD 176 (725)
Q Consensus 97 ~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLh 176 (725)
+.+|.||||+|+..|+.+++++|++. +.+++.. +..|.||||+|+..+. .+++++|++.|++++..+..|.||+|
T Consensus 4 ~~~g~t~l~~a~~~~~~~~i~~li~~-~~~~~~~-~~~g~~~l~~a~~~~~---~~~~~~ll~~~~~~~~~~~~~~~~l~ 78 (126)
T cd00204 4 DEDGRTPLHLAASNGHLEVVKLLLEN-GADVNAK-DNDGRTPLHLAAKNGH---LEIVKLLLEKGADVNARDKDGNTPLH 78 (126)
T ss_pred CcCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcc-CCCCCcHHHHHHHcCC---HHHHHHHHHcCCCccccCCCCCCHHH
Confidence 35799999999999999999999999 9998888 8999999999999999 99999999999999999999999999
Q ss_pred HHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCcc
Q 004887 177 VIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPID 252 (725)
Q Consensus 177 lA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd 252 (725)
+|+..++ .+++++|+++|.+++. .+..|.|||++|...+..+++
T Consensus 79 ~a~~~~~----~~~~~~L~~~~~~~~~----------------------------~~~~~~~~l~~~~~~~~~~~~ 122 (126)
T cd00204 79 LAARNGN----LDVVKLLLKHGADVNA----------------------------RDKDGRTPLHLAAKNGHLEVV 122 (126)
T ss_pred HHHHcCc----HHHHHHHHHcCCCCcc----------------------------cCCCCCCHHHHHHhcCCHHHH
Confidence 9999854 6699999999977764 455666778888777655543
No 73
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.46 E-value=2.8e-13 Score=118.30 Aligned_cols=64 Identities=45% Similarity=0.630 Sum_probs=59.6
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcC
Q 004887 100 HRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTD 168 (725)
Q Consensus 100 G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D 168 (725)
|.||||+|+.+|+.+++++|+++ |+++|.+ +.+|+||||+|+..|+ .+++++|+++|++++.+|
T Consensus 26 ~~~~l~~A~~~~~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~n 89 (89)
T PF12796_consen 26 GNTALHYAAENGNLEIVKLLLEN-GADINSQ-DKNGNTALHYAAENGN---LEIVKLLLEHGADVNIRN 89 (89)
T ss_dssp SSBHHHHHHHTTTHHHHHHHHHT-TTCTT-B-STTSSBHHHHHHHTTH---HHHHHHHHHTTT-TTSS-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHh-ccccccc-CCCCCCHHHHHHHcCC---HHHHHHHHHcCCCCCCcC
Confidence 88999999999999999999999 9999999 8999999999999999 999999999999999876
No 74
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.43 E-value=5.6e-13 Score=153.03 Aligned_cols=174 Identities=14% Similarity=0.153 Sum_probs=127.8
Q ss_pred cCCccCCCCCCcHHHHH-----------HHHHHHC----CCCccCcCCCCCCChHHHHHHHcCChhhhcCchhhhhcccC
Q 004887 3 AVPAVTMRNKSSPLKIS-----------ISIFQKH----TQNVFLVDFAINDRTLLILLFFQNYLIMCGGSEKLSSKALA 67 (725)
Q Consensus 3 Adpdv~d~~G~TPLhiA-----------vklLL~~----GADVN~~D~D~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~ 67 (725)
.+.+.+-..|+|.||+| +..|++. -.|+..-+ .+.|.||||+|+.+.+.+.+ ..++.
T Consensus 134 w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~e-eY~GqSaLHiAIv~~~~~~V-------~lLl~ 205 (782)
T KOG3676|consen 134 WKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSE-EYYGQSALHIAIVNRDAELV-------RLLLA 205 (782)
T ss_pred hccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhH-hhcCcchHHHHHHhccHHHH-------HHHHH
Confidence 45566667899999999 4445543 34666666 67999999999977666552 22222
Q ss_pred CCCCCCCCCCccchhHHHHHH-------hhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHH
Q 004887 68 PSASPPSKPSLQRNMIGLWYS-------FQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALH 140 (725)
Q Consensus 68 ~aa~~~~~~~~~~~~~~L~~a-------~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH 140 (725)
.+++.+....+. ++.. ...+.......|..||.+||..++.+|+++|+++ |||+|++ |..|+|.||
T Consensus 206 ~gADV~aRa~G~-----FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~-gAd~~aq-DS~GNTVLH 278 (782)
T KOG3676|consen 206 AGADVHARACGA-----FFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAH-GADPNAQ-DSNGNTVLH 278 (782)
T ss_pred cCCchhhHhhcc-----ccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhc-CCCCCcc-ccCCChHHH
Confidence 222111000000 0000 1111222236799999999999999999999998 9999999 999999999
Q ss_pred HHHhCCCCCHHHHHHHHHHCCCC--CCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCC
Q 004887 141 CAASGGSVNAVDVVKLLLFAGAD--SNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNG 198 (725)
Q Consensus 141 ~Aa~~G~~~~~eiVklLL~~GAD--in~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~G 198 (725)
..+..-. .++-.++|++|++ ...+|+.|.|||.+|++. +.++|.+.+++..
T Consensus 279 ~lVi~~~---~~My~~~L~~ga~~l~~v~N~qgLTPLtLAakl----Gk~emf~~ile~~ 331 (782)
T KOG3676|consen 279 MLVIHFV---TEMYDLALELGANALEHVRNNQGLTPLTLAAKL----GKKEMFQHILERR 331 (782)
T ss_pred HHHHHHH---HHHHHHHHhcCCCccccccccCCCChHHHHHHh----hhHHHHHHHHHhh
Confidence 9999866 8999999999999 999999999999999997 5566888888874
No 75
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.41 E-value=2.7e-12 Score=115.96 Aligned_cols=121 Identities=36% Similarity=0.409 Sum_probs=101.7
Q ss_pred CCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHH
Q 004887 38 NDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVK 117 (725)
Q Consensus 38 ~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk 117 (725)
+|.||||+|+..++.++.. .+...+......+..|.||||+|+..++.++++
T Consensus 6 ~g~t~l~~a~~~~~~~~i~----------------------------~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~ 57 (126)
T cd00204 6 DGRTPLHLAASNGHLEVVK----------------------------LLLENGADVNAKDNDGRTPLHLAAKNGHLEIVK 57 (126)
T ss_pred CCCCHHHHHHHcCcHHHHH----------------------------HHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHH
Confidence 8999999999776554321 222223333556678999999999999999999
Q ss_pred HHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHH
Q 004887 118 LILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLL 195 (725)
Q Consensus 118 ~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL 195 (725)
+|++. +++++.. +..|.||+|+|+..++ .+++++|++.|.+++..|..|.||+++|... ...+++++|+
T Consensus 58 ~ll~~-~~~~~~~-~~~~~~~l~~a~~~~~---~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~Ll 126 (126)
T cd00204 58 LLLEK-GADVNAR-DKDGNTPLHLAARNGN---LDVVKLLLKHGADVNARDKDGRTPLHLAAKN----GHLEVVKLLL 126 (126)
T ss_pred HHHHc-CCCcccc-CCCCCCHHHHHHHcCc---HHHHHHHHHcCCCCcccCCCCCCHHHHHHhc----CCHHHHHHhC
Confidence 99999 9999988 8999999999999999 9999999999999999999999999999997 4555887764
No 76
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.37 E-value=1.3e-12 Score=113.65 Aligned_cols=98 Identities=24% Similarity=0.302 Sum_probs=79.0
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCC
Q 004887 103 PLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHP 182 (725)
Q Consensus 103 PLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g 182 (725)
-++|++++|.++-|+-.+.. |.+||.. ..|+||||+|+..|. .+++++|+..||+|+.+|+.|-|||.-|+..
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~-g~nVn~~--~ggR~plhyAAD~GQ---l~ilefli~iGA~i~~kDKygITPLLsAvwE- 77 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNE-GLNVNEI--YGGRTPLHYAADYGQ---LSILEFLISIGANIQDKDKYGITPLLSAVWE- 77 (117)
T ss_pred hHhhhhccCcHHHHHHHHHc-cccHHHH--hCCcccchHhhhcch---HHHHHHHHHhccccCCccccCCcHHHHHHHH-
Confidence 45788888888888888888 8888876 588888888888888 8888888888888888888888888888884
Q ss_pred CCCCHHHHHHHHHHCCCCCCCccccccc
Q 004887 183 NVPDSRVSLEDLLKNGGSVSFDELQVSS 210 (725)
Q Consensus 183 ~~e~~~~ivelLL~~Gadvn~~d~~g~T 210 (725)
++..+|++||.+|++-.++--+|.+
T Consensus 78 ---GH~~cVklLL~~GAdrt~~~PdG~~ 102 (117)
T KOG4214|consen 78 ---GHRDCVKLLLQNGADRTIHAPDGTA 102 (117)
T ss_pred ---hhHHHHHHHHHcCcccceeCCCchh
Confidence 5566888888888887765444443
No 77
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.36 E-value=5.4e-12 Score=125.38 Aligned_cols=125 Identities=30% Similarity=0.307 Sum_probs=107.5
Q ss_pred CCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCC----
Q 004887 37 INDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGS---- 112 (725)
Q Consensus 37 ~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~---- 112 (725)
..+.+++|.++..+.... +.+.+..+.+.+..+.+|.||||+|+..|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~----------------------------~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 122 (235)
T COG0666 71 LDGRLPLHSAASKGDDKI----------------------------VKLLLASGADVNAKDADGDTPLHLAALNGNPPEG 122 (235)
T ss_pred ccccCHHHHHHHcCcHHH----------------------------HHHHHHcCCCcccccCCCCcHHHHHHhcCCcccc
Confidence 378999999985433332 235566667777788999999999999999
Q ss_pred -HHHHHHHHhcCCC---CcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHH
Q 004887 113 -VDVVKLILSLTKA---DVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSR 188 (725)
Q Consensus 113 -~eiVk~LLe~~Ga---dVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~ 188 (725)
.+++++||+. |+ +.+.+ +..|.||||+|+..|+ .+++++|++.|++++.++..|.|++++|+.. +..
T Consensus 123 ~~~~~~~ll~~-g~~~~~~~~~-~~~g~tpl~~A~~~~~---~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~----~~~ 193 (235)
T COG0666 123 NIEVAKLLLEA-GADLDVNNLR-DEDGNTPLHWAALNGD---ADIVELLLEAGADPNSRNSYGVTALDPAAKN----GRI 193 (235)
T ss_pred hHHHHHHHHHc-CCCCCCcccc-CCCCCchhHHHHHcCc---hHHHHHHHhcCCCCcccccCCCcchhhhccc----chH
Confidence 9999999999 88 55555 9999999999999999 8999999999999999999999999999997 555
Q ss_pred HHHHHHHHCC
Q 004887 189 VSLEDLLKNG 198 (725)
Q Consensus 189 ~ivelLL~~G 198 (725)
++++.|+..+
T Consensus 194 ~~~~~l~~~~ 203 (235)
T COG0666 194 ELVKLLLDKG 203 (235)
T ss_pred HHHHHHHhcC
Confidence 6999999876
No 78
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.33 E-value=4.1e-12 Score=150.37 Aligned_cols=105 Identities=29% Similarity=0.373 Sum_probs=96.3
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhC
Q 004887 102 TPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVH 181 (725)
Q Consensus 102 TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~ 181 (725)
+.||.|+..|+.+++++||+. |+|+|.+ |.+|+||||+||..|+ .++|++||++|+|++.+|..|+||||+|+..
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~-Gadin~~-d~~G~TpLh~Aa~~g~---~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~ 158 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTG-GADPNCR-DYDGRTPLHIACANGH---VQVVRVLLEFGADPTLLDKDGKTPLELAEEN 158 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCcHHHHHHHCCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 469999999999999999999 9999999 9999999999999999 9999999999999999999999999999997
Q ss_pred CCCCCHHHHHHHHHHC-------CCCCCCcccccccccccc
Q 004887 182 PNVPDSRVSLEDLLKN-------GGSVSFDELQVSSVDLRS 215 (725)
Q Consensus 182 g~~e~~~~ivelLL~~-------Gadvn~~d~~g~Tp~~~a 215 (725)
+..+++++|+++ |++++..+..|.++....
T Consensus 159 ----g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~ 195 (664)
T PTZ00322 159 ----GFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLED 195 (664)
T ss_pred ----CcHHHHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence 455699999999 888888888888775443
No 79
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.32 E-value=6.8e-12 Score=109.24 Aligned_cols=96 Identities=26% Similarity=0.321 Sum_probs=84.2
Q ss_pred CccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHH
Q 004887 77 SLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKL 156 (725)
Q Consensus 77 ~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVkl 156 (725)
.+..+++.-....+.++++.- .|+||||+|+.+|.++++++|+.. |++|+.+ |+.|-|||.-|+..|+ .++|++
T Consensus 12 NG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~i-GA~i~~k-DKygITPLLsAvwEGH---~~cVkl 85 (117)
T KOG4214|consen 12 NGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISI-GANIQDK-DKYGITPLLSAVWEGH---RDCVKL 85 (117)
T ss_pred cCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHh-ccccCCc-cccCCcHHHHHHHHhh---HHHHHH
Confidence 345566666666666666654 899999999999999999999999 9999999 9999999999999999 999999
Q ss_pred HHHCCCCCCCcCCCCCcHHHHH
Q 004887 157 LLFAGADSNLTDAHGNRPFDVI 178 (725)
Q Consensus 157 LL~~GADin~~D~~G~TPLhlA 178 (725)
||+.|||-..+.-+|.+.+..+
T Consensus 86 LL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 86 LLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHcCcccceeCCCchhHHhhc
Confidence 9999999999999998877654
No 80
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.30 E-value=1.6e-11 Score=121.93 Aligned_cols=128 Identities=34% Similarity=0.359 Sum_probs=110.0
Q ss_pred hhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCC--CCHHHHHHHHHHCCC---CCCCcCCC
Q 004887 96 IVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGS--VNAVDVVKLLLFAGA---DSNLTDAH 170 (725)
Q Consensus 96 ~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~--~~~~eiVklLL~~GA---Din~~D~~ 170 (725)
.+..+.+++|.++..+..+++++|+.. |++++.+ +.+|.||||+|+..++ ....+++++||+.|+ +.+.+|..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~ 146 (235)
T COG0666 69 RDLDGRLPLHSAASKGDDKIVKLLLAS-GADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED 146 (235)
T ss_pred CCccccCHHHHHHHcCcHHHHHHHHHc-CCCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence 345689999999999999999999999 9999998 9999999999999986 223699999999999 66677999
Q ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcC
Q 004887 171 GNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYP 250 (725)
Q Consensus 171 G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~ 250 (725)
|+||||+|+..|+. +++++|++.|++++. .+..|.|+|+.|+..++.+
T Consensus 147 g~tpl~~A~~~~~~----~~~~~ll~~~~~~~~----------------------------~~~~g~t~l~~a~~~~~~~ 194 (235)
T COG0666 147 GNTPLHWAALNGDA----DIVELLLEAGADPNS----------------------------RNSYGVTALDPAAKNGRIE 194 (235)
T ss_pred CCchhHHHHHcCch----HHHHHHHhcCCCCcc----------------------------cccCCCcchhhhcccchHH
Confidence 99999999998655 599999999999985 3566778889998888888
Q ss_pred ccCCCCc
Q 004887 251 IDPSLPD 257 (725)
Q Consensus 251 vd~~Lpd 257 (725)
+...+.+
T Consensus 195 ~~~~l~~ 201 (235)
T COG0666 195 LVKLLLD 201 (235)
T ss_pred HHHHHHh
Confidence 8665543
No 81
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.29 E-value=2.5e-12 Score=103.56 Aligned_cols=55 Identities=42% Similarity=0.533 Sum_probs=33.2
Q ss_pred HHhcCC-CCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Q 004887 119 ILSLTK-ADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVI 178 (725)
Q Consensus 119 LLe~~G-adVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA 178 (725)
||++ | +++|.+ |..|.||||+||..|+ .++|++||+.|+|++.+|..|+||||+|
T Consensus 1 LL~~-~~~~~n~~-d~~G~T~LH~A~~~g~---~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEH-GPADVNAQ-DKYGNTPLHWAARYGH---SEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp ------T--TT----TTS--HHHHHHHHT----HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCcc-CcCCCcCc-CCCCCcHHHHHHHcCc---HHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 6777 6 999999 9999999999999999 9999999999999999999999999997
No 82
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.23 E-value=1.9e-11 Score=97.33 Aligned_cols=54 Identities=48% Similarity=0.695 Sum_probs=41.4
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHH
Q 004887 100 HRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLL 158 (725)
Q Consensus 100 G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL 158 (725)
|+||||+|+..|+.+++++|+++ |+|+|.+ |.+|+||||+|+..|+ .+++++||
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~-~~din~~-d~~g~t~lh~A~~~g~---~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEH-GADINAQ-DEDGRTPLHYAAKNGN---IDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHT-TSGTT-B--TTS--HHHHHHHTT----HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHccC---HHHHHHHC
Confidence 67888888888888888888888 8888888 8888888888888888 88888886
No 83
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.13 E-value=6.7e-11 Score=94.21 Aligned_cols=54 Identities=39% Similarity=0.495 Sum_probs=45.0
Q ss_pred CchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHH
Q 004887 135 KSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLL 195 (725)
Q Consensus 135 G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL 195 (725)
|+||||+||..|+ .+++++|++.|+|+|.+|.+|+||||+|+..|+ .+++++||
T Consensus 1 g~t~lh~A~~~g~---~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~----~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGN---LEIVKLLLEHGADINAQDEDGRTPLHYAAKNGN----IDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT----HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-----HHHHHHHH
T ss_pred CChHHHHHHHhCC---HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccC----HHHHHHHC
Confidence 7899999999999 999999999999999999999999999999855 55999986
No 84
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.12 E-value=8.9e-11 Score=128.49 Aligned_cols=92 Identities=25% Similarity=0.216 Sum_probs=73.5
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcC-CCCCcHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTD-AHGNRPFD 176 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D-~~G~TPLh 176 (725)
.+|.|+||-|+..||.+||+|||+. |+|||+. |.+||||||||+..++ +.+++.|++.||-|-+.. .++.|+..
T Consensus 581 dEGITaLHNAiCaghyeIVkFLi~~-ganVNa~-DSdGWTPLHCAASCNn---v~~ckqLVe~GaavfAsTlSDmeTa~e 655 (752)
T KOG0515|consen 581 DEGITALHNAICAGHYEIVKFLIEF-GANVNAA-DSDGWTPLHCAASCNN---VPMCKQLVESGAAVFASTLSDMETAAE 655 (752)
T ss_pred ccchhHHhhhhhcchhHHHHHHHhc-CCcccCc-cCCCCchhhhhhhcCc---hHHHHHHHhccceEEeeecccccchhh
Confidence 6788999999999999999999988 8999988 8899999999988888 889999999888776554 35678776
Q ss_pred HHHhCCCCCCHHHHHHHHHH
Q 004887 177 VIVVHPNVPDSRVSLEDLLK 196 (725)
Q Consensus 177 lA~~~g~~e~~~~ivelLL~ 196 (725)
-+-.. -+++..+.++|..
T Consensus 656 KCee~--eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 656 KCEEM--EEGYDQCSQYLYG 673 (752)
T ss_pred hcchh--hhhHHHHHHHHHH
Confidence 65332 2567778888864
No 85
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.11 E-value=1.9e-10 Score=136.26 Aligned_cols=96 Identities=27% Similarity=0.255 Sum_probs=85.7
Q ss_pred cchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHH
Q 004887 79 QRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLL 158 (725)
Q Consensus 79 ~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL 158 (725)
+...+.+++..+.+.+..+..|.||||+|+.+|+.+++++||++ |+|+|.+ |.+|.||||+|+..|+ .+++++|+
T Consensus 94 ~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~-Gadvn~~-d~~G~TpLh~A~~~g~---~~iv~~Ll 168 (664)
T PTZ00322 94 DAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEF-GADPTLL-DKDGKTPLELAEENGF---REVVQLLS 168 (664)
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHCCc---HHHHHHHH
Confidence 34455566667777777888999999999999999999999999 9999999 9999999999999999 99999999
Q ss_pred HC-------CCCCCCcCCCCCcHHHHHH
Q 004887 159 FA-------GADSNLTDAHGNRPFDVIV 179 (725)
Q Consensus 159 ~~-------GADin~~D~~G~TPLhlA~ 179 (725)
++ |++++..+..|.+|+..+.
T Consensus 169 ~~~~~~~~~ga~~~~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 169 RHSQCHFELGANAKPDSFTGKPPSLEDS 196 (664)
T ss_pred hCCCcccccCCCCCccccCCCCccchhh
Confidence 99 9999999998988877655
No 86
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=2.1e-10 Score=125.69 Aligned_cols=91 Identities=29% Similarity=0.362 Sum_probs=83.0
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCC
Q 004887 104 LMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPN 183 (725)
Q Consensus 104 Lh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~ 183 (725)
|.-|+..|-+++|+-++.. --|+... +.+|.||||-|+..|+ .+||++||++|+|+|..|.+||||||.|+..
T Consensus 554 LLDaaLeGEldlVq~~i~e-v~DpSqp-NdEGITaLHNAiCagh---yeIVkFLi~~ganVNa~DSdGWTPLHCAASC-- 626 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYE-VTDPSQP-NDEGITALHNAICAGH---YEIVKFLIEFGANVNAADSDGWTPLHCAASC-- 626 (752)
T ss_pred HHhhhhcchHHHHHHHHHh-hcCCCCC-CccchhHHhhhhhcch---hHHHHHHHhcCCcccCccCCCCchhhhhhhc--
Confidence 4558899999999999988 7888888 8899999999999999 9999999999999999999999999999997
Q ss_pred CCCHHHHHHHHHHCCCCCCC
Q 004887 184 VPDSRVSLEDLLKNGGSVSF 203 (725)
Q Consensus 184 ~e~~~~ivelLL~~Gadvn~ 203 (725)
+...+++.|++.|+-|-.
T Consensus 627 --Nnv~~ckqLVe~GaavfA 644 (752)
T KOG0515|consen 627 --NNVPMCKQLVESGAAVFA 644 (752)
T ss_pred --CchHHHHHHHhccceEEe
Confidence 445599999999988765
No 87
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.04 E-value=6.3e-10 Score=114.54 Aligned_cols=92 Identities=30% Similarity=0.250 Sum_probs=85.6
Q ss_pred hCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCC
Q 004887 90 QRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDA 169 (725)
Q Consensus 90 ~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~ 169 (725)
...++..|..|+|+|..|+..|+.+.|++||+. |+|||...+..+.||||+|+..|+ .++.++||+.||.+..+|.
T Consensus 35 vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~-gaDvN~~qhg~~YTpLmFAALSGn---~dvcrllldaGa~~~~vNs 110 (396)
T KOG1710|consen 35 VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLEL-GADVNDKQHGTLYTPLMFAALSGN---QDVCRLLLDAGARMYLVNS 110 (396)
T ss_pred hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHh-CCCcCcccccccccHHHHHHHcCC---chHHHHHHhccCccccccc
Confidence 445677789999999999999999999999999 999999877889999999999999 9999999999999999999
Q ss_pred CCCcHHHHHHhCCCCC
Q 004887 170 HGNRPFDVIVVHPNVP 185 (725)
Q Consensus 170 ~G~TPLhlA~~~g~~e 185 (725)
-|+|+-.+|+..|+-+
T Consensus 111 vgrTAaqmAAFVG~H~ 126 (396)
T KOG1710|consen 111 VGRTAAQMAAFVGHHE 126 (396)
T ss_pred hhhhHHHHHHHhcchH
Confidence 9999999999987665
No 88
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.98 E-value=4.4e-10 Score=90.45 Aligned_cols=50 Identities=38% Similarity=0.383 Sum_probs=32.5
Q ss_pred CCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHH
Q 004887 91 RLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCA 142 (725)
Q Consensus 91 ~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~A 142 (725)
.+.+..+..|.||||+||.+|+.++|++||+. |+|++.+ |.+|+||||+|
T Consensus 7 ~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~-g~d~~~~-d~~G~Tpl~~A 56 (56)
T PF13857_consen 7 ADVNAQDKYGNTPLHWAARYGHSEVVRLLLQN-GADPNAK-DKDGQTPLHYA 56 (56)
T ss_dssp --TT---TTS--HHHHHHHHT-HHHHHHHHHC-T--TT----TTS--HHHH-
T ss_pred CCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHC-cCCCCCC-cCCCCCHHHhC
Confidence 45667788999999999999999999999987 9999999 99999999997
No 89
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=98.90 E-value=4.3e-09 Score=108.48 Aligned_cols=103 Identities=23% Similarity=0.234 Sum_probs=89.7
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCc-CCCCCcHHHHH
Q 004887 100 HRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLT-DAHGNRPFDVI 178 (725)
Q Consensus 100 G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~-D~~G~TPLhlA 178 (725)
-..||.-++..|..+....||+. --+||.+ |..|+|+|..|+..|+ .++|++||+.|||+|.. +..+.||||+|
T Consensus 12 ~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~-D~sGMs~LahAaykGn---l~~v~lll~~gaDvN~~qhg~~YTpLmFA 86 (396)
T KOG1710|consen 12 PKSPLLEAIDKNDTEAALALLST-VRQVNQR-DPSGMSVLAHAAYKGN---LTLVELLLELGADVNDKQHGTLYTPLMFA 86 (396)
T ss_pred hhhHHHHHHccCcHHHHHHHHHH-hhhhhcc-CCCcccHHHHHHhcCc---HHHHHHHHHhCCCcCcccccccccHHHHH
Confidence 45789999999999999999987 6669999 9999999999999999 99999999999999976 56789999999
Q ss_pred HhCCCCCCHHHHHHHHHHCCCCCCCcccccccc
Q 004887 179 VVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSV 211 (725)
Q Consensus 179 ~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp 211 (725)
+..|+.+ +.++|++.|+.....|.-|.|+
T Consensus 87 ALSGn~d----vcrllldaGa~~~~vNsvgrTA 115 (396)
T KOG1710|consen 87 ALSGNQD----VCRLLLDAGARMYLVNSVGRTA 115 (396)
T ss_pred HHcCCch----HHHHHHhccCccccccchhhhH
Confidence 9986665 9999999999998544444433
No 90
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.59 E-value=3.1e-08 Score=113.61 Aligned_cols=87 Identities=26% Similarity=0.277 Sum_probs=81.2
Q ss_pred hCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCC
Q 004887 90 QRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDA 169 (725)
Q Consensus 90 ~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~ 169 (725)
..-.+..|..|+|+||+|+..|..++++.||++ |+|++.++...|+||||-|+..|+ ++++-+||.+|+.+.++|+
T Consensus 42 ~n~anikD~~GR~alH~~~S~~k~~~l~wLlqh-Gidv~vqD~ESG~taLHRaiyyG~---idca~lLL~~g~SL~i~Dk 117 (1267)
T KOG0783|consen 42 QNLANIKDRYGRTALHIAVSENKNSFLRWLLQH-GIDVFVQDEESGYTALHRAIYYGN---IDCASLLLSKGRSLRIKDK 117 (1267)
T ss_pred hhhhhHHHhhccceeeeeeccchhHHHHHHHhc-CceeeeccccccchHhhHhhhhch---HHHHHHHHhcCCceEEecc
Confidence 344666788999999999999999999999999 999999966689999999999999 9999999999999999999
Q ss_pred CCCcHHHHHHh
Q 004887 170 HGNRPFDVIVV 180 (725)
Q Consensus 170 ~G~TPLhlA~~ 180 (725)
+|..||.+.++
T Consensus 118 eglsplq~~~r 128 (1267)
T KOG0783|consen 118 EGLSPLQFLSR 128 (1267)
T ss_pred cCCCHHHHHhh
Confidence 99999999887
No 91
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.58 E-value=1.3e-07 Score=103.42 Aligned_cols=87 Identities=26% Similarity=0.277 Sum_probs=77.3
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCC
Q 004887 103 PLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHP 182 (725)
Q Consensus 103 PLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g 182 (725)
-||-.+..|++++.--||.. ||++|......|.||||.|++.|+ .--+++|+-+|||++..|.+|.||+.||-..|
T Consensus 136 QLhasvRt~nlet~LRll~l-GA~~N~~hpekg~TpLHvAAk~Gq---~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~g 211 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSL-GAQANFFHPEKGNTPLHVAAKAGQ---ILQAELLAVYGADPGAQDSSGMTPVDYARQGG 211 (669)
T ss_pred HHHHHhhcccHHHHHHHHHc-ccccCCCCcccCCchhHHHHhccc---hhhhhHHhhccCCCCCCCCCCCcHHHHHHhcC
Confidence 48999999999988888888 999999977799999999999999 88999999999999999999999999999987
Q ss_pred CCCCHHHHHHH
Q 004887 183 NVPDSRVSLED 193 (725)
Q Consensus 183 ~~e~~~~ivel 193 (725)
|-+....++++
T Consensus 212 H~~laeRl~e~ 222 (669)
T KOG0818|consen 212 HHELAERLVEI 222 (669)
T ss_pred chHHHHHHHHH
Confidence 77644444443
No 92
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=98.58 E-value=5.8e-08 Score=105.91 Aligned_cols=87 Identities=32% Similarity=0.611 Sum_probs=67.9
Q ss_pred CCCCCCCCCcccCCC-------CccCccCcCCCCCcC-CCCCCC-CCcccccCCccccc--------cCCcccccccCCC
Q 004887 288 ECPFAHPGENARRRD-------PRKFHYSCMPCPDHR-KGACSR-GDMCEYAHGIFESW--------LHPAQYRTKLCKD 350 (725)
Q Consensus 288 eCp~~H~~E~arrr~-------Pr~y~Ykt~~Cp~~~-~g~C~~-Gd~C~yaH~~~E~~--------~hP~~ykt~~C~~ 350 (725)
.|++.|+....+.+. -..-.|++..|..|+ .|.|++ |+.|.|+|+..|++ ..|..|||++|.+
T Consensus 103 ~~~~~~p~~~~~~~~~~~~~~~~~p~~~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~~~~~~~~~~~~~kt~lC~~ 182 (332)
T KOG1677|consen 103 SCRYNHPDLRLRPRPVRRSRGERKPERYKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLPSSENQVGNPPKYKTKLCPK 182 (332)
T ss_pred CCCccCcccccccCCccccccccCcccccCCcceeeecCccccccCchhhhcCCcccccccccchhhcCCCCCCCcCCCc
Confidence 577777642122221 122568999999986 789999 99999999999988 2377999999999
Q ss_pred C---CCCCCCc-cccCCCcCcccccccC
Q 004887 351 G---TSCMRRV-CFFAHALDELRPLYAS 374 (725)
Q Consensus 351 ~---~~C~~~~-C~faH~~~elr~~~~~ 374 (725)
| +.|+|+. |.|+|+..|.+.....
T Consensus 183 f~~tG~C~yG~rC~F~H~~~~~~~~~~~ 210 (332)
T KOG1677|consen 183 FQKTGLCKYGSRCRFIHGEPEDRASNRH 210 (332)
T ss_pred cccCCCCCCCCcCeecCCCccccccccC
Confidence 7 5899975 9999999999976543
No 93
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.43 E-value=3e-07 Score=65.77 Aligned_cols=33 Identities=55% Similarity=0.671 Sum_probs=23.5
Q ss_pred CCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCC
Q 004887 134 DKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDA 169 (725)
Q Consensus 134 ~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~ 169 (725)
+|.||||+|+..|+ .++|++||++|++++.+|+
T Consensus 1 dG~TpLh~A~~~~~---~~~v~~Ll~~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGH---PDIVKLLLKHGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTC---HHHHHHHHHTTSCTTCBCT
T ss_pred CcccHHHHHHHHHH---HHHHHHHHHCcCCCCCCCC
Confidence 46777777777777 7777777777777776653
No 94
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.43 E-value=2e-07 Score=101.67 Aligned_cols=92 Identities=28% Similarity=0.342 Sum_probs=83.2
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHC-CCCCCCcCCCCCcHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFA-GADSNLTDAHGNRPFD 176 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~-GADin~~D~~G~TPLh 176 (725)
.++...+++|+..|++..++-+.-. |.|++.+ |++.+|+||.||..|+ +++|++||+. +.|++.+|..|+|||+
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~-DyD~RTaLHvAAaEG~---v~v~kfl~~~~kv~~~~kDRw~rtPlD 578 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQ-GMDLETK-DYDDRTALHVAAAEGH---VEVVKFLLNACKVDPDPKDRWGRTPLD 578 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHh-ccccccc-ccccchhheeecccCc---eeHHHHHHHHHcCCCChhhccCCCcch
Confidence 4567789999999999999988877 9999999 9999999999999999 9999999987 8999999999999999
Q ss_pred HHHhCCCCCCHHHHHHHHHHCC
Q 004887 177 VIVVHPNVPDSRVSLEDLLKNG 198 (725)
Q Consensus 177 lA~~~g~~e~~~~ivelLL~~G 198 (725)
-|... .+++++++|-+.-
T Consensus 579 dA~~F----~h~~v~k~L~~~~ 596 (622)
T KOG0506|consen 579 DAKHF----KHKEVVKLLEEAQ 596 (622)
T ss_pred HhHhc----CcHHHHHHHHHHh
Confidence 99997 5556888887653
No 95
>PF13606 Ank_3: Ankyrin repeat
Probab=98.39 E-value=3.3e-07 Score=64.36 Aligned_cols=28 Identities=54% Similarity=0.730 Sum_probs=14.9
Q ss_pred CchHHHHHHhCCCCCHHHHHHHHHHCCCCCC
Q 004887 135 KSTALHCAASGGSVNAVDVVKLLLFAGADSN 165 (725)
Q Consensus 135 G~TpLH~Aa~~G~~~~~eiVklLL~~GADin 165 (725)
|+||||+||..|+ .++|++||++|+|+|
T Consensus 2 G~T~Lh~A~~~g~---~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGN---IEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCC---HHHHHHHHHcCCCCC
Confidence 4555555555555 555555555555554
No 96
>KOG1595 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=98.35 E-value=2.6e-07 Score=102.93 Aligned_cols=198 Identities=14% Similarity=0.140 Sum_probs=114.8
Q ss_pred CCchHHHHHHhCCCCCHHHHHHHHHHCC-CCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccc
Q 004887 134 DKSTALHCAASGGSVNAVDVVKLLLFAG-ADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVD 212 (725)
Q Consensus 134 ~G~TpLH~Aa~~G~~~~~eiVklLL~~G-ADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~ 212 (725)
+.+|+|++|+..|. .+++..++..+ .++|-.--+|.. |.++.. ...+..+.+.+|+..++..+.+|-.|.-+.
T Consensus 57 ~qR~~~~v~~~~Gs---~~~~~~i~~~~~~e~~~~C~~~~~--~C~~~g-~s~~~~e~~~hL~~~k~~~~~tda~g~~~~ 130 (528)
T KOG1595|consen 57 NQRRRRPVARRDGS---FNYSPDIYCTKYDEVTGICPDGDE--HCAVLG-RSVGDTERTYHLRYYKTLPCVTDARGNCVK 130 (528)
T ss_pred ccccccchhhhcCc---cccccceeecchhhccccCCCCcc--cchhcc-cccCCcceeEeccccccccCccccCCCccc
Confidence 45699999999999 88988888764 567766666666 444432 222445578888889999988887777653
Q ss_pred cccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCCcc-ccccccchhhhhccccccccccccCCCCCCCCC
Q 004887 213 LRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDI-KDSIYASDEFRMYSFKIRPCSRAYSHDWTECPF 291 (725)
Q Consensus 213 ~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi-~~~iy~~Defrm~~fkv~~Csr~~~hd~~eCp~ 291 (725)
.......... -.....+|..-.+.+. ...+++- .+..+.. .++.| +.-...++-+ -+|
T Consensus 131 ~v~~~~~~~~----------~~~~r~~~~~l~e~~~---~~~~~~~e~~~~~~~---~~~~y----~~Dp~~pdi~-~~y 189 (528)
T KOG1595|consen 131 NVLHCAFAHG----------PNDLRPPVEDLLELQG---GSGLPDDEPEVESKL---DVTEY----PEDPSWPDIN-GIY 189 (528)
T ss_pred CcccccccCC----------ccccccHHHHHHhccc---ccCccCCCccccccc---ccccc----cCCCCccccc-ccc
Confidence 1110000000 0001111111111110 1111110 0000000 01001 1111111100 112
Q ss_pred CCCCCcccCCCCccCccCcCCCCCcCCCCCCCCCcccccC-CccccccCCcc--cccccCCCCC--CCCCCc-cccCCCc
Q 004887 292 AHPGENARRRDPRKFHYSCMPCPDHRKGACSRGDMCEYAH-GIFESWLHPAQ--YRTKLCKDGT--SCMRRV-CFFAHAL 365 (725)
Q Consensus 292 ~H~~E~arrr~Pr~y~Ykt~~Cp~~~~g~C~~Gd~C~yaH-~~~E~~~hP~~--ykt~~C~~~~--~C~~~~-C~faH~~ 365 (725)
.- . +-+-|.||+++|+-- .|..|..|.|+| |....+..|.. |+..+|..|+ .|.+|. |.||||.
T Consensus 190 s~-D------eFrMy~fKir~C~R~---~shDwteCPf~HpgEkARRRDPRkyhYs~tpCPefrkG~C~rGD~CEyaHgv 259 (528)
T KOG1595|consen 190 SS-D------EFRMYSFKIRRCSRP---RSHDWTECPFAHPGEKARRRDPRKYHYSSTPCPEFRKGSCERGDSCEYAHGV 259 (528)
T ss_pred cc-c------ceEEEeeeecccCCc---cCCCcccCCccCCCcccccCCcccccccCccCcccccCCCCCCCccccccce
Confidence 21 1 136699999999754 699999999999 88888888885 7888999985 799986 9999998
Q ss_pred Ccc
Q 004887 366 DEL 368 (725)
Q Consensus 366 ~el 368 (725)
.|-
T Consensus 260 fEc 262 (528)
T KOG1595|consen 260 FEC 262 (528)
T ss_pred ehh
Confidence 875
No 97
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.32 E-value=2.4e-07 Score=106.48 Aligned_cols=89 Identities=21% Similarity=0.166 Sum_probs=76.6
Q ss_pred HHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCC-CCcHHHHHHhCCCCCCHHHHHHHHHH
Q 004887 118 LILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAH-GNRPFDVIVVHPNVPDSRVSLEDLLK 196 (725)
Q Consensus 118 ~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~-G~TPLhlA~~~g~~e~~~~ivelLL~ 196 (725)
++-+.++--.|.+ |..|+|+||+|+..+. .+++++||.+|+|++.+|.+ |+||||-|+..|+++ ++-+||+
T Consensus 36 F~~k~c~n~anik-D~~GR~alH~~~S~~k---~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~id----ca~lLL~ 107 (1267)
T KOG0783|consen 36 FSEKSCQNLANIK-DRYGRTALHIAVSENK---NSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNID----CASLLLS 107 (1267)
T ss_pred HHHHhhhhhhhHH-Hhhccceeeeeeccch---hHHHHHHHhcCceeeeccccccchHhhHhhhhchHH----HHHHHHh
Confidence 3334433347778 9999999999999999 99999999999999999975 999999999997776 9999999
Q ss_pred CCCCCCCccccccccccc
Q 004887 197 NGGSVSFDELQVSSVDLR 214 (725)
Q Consensus 197 ~Gadvn~~d~~g~Tp~~~ 214 (725)
+|+.+.++|++|..|+..
T Consensus 108 ~g~SL~i~Dkeglsplq~ 125 (1267)
T KOG0783|consen 108 KGRSLRIKDKEGLSPLQF 125 (1267)
T ss_pred cCCceEEecccCCCHHHH
Confidence 999999888888888643
No 98
>PF13606 Ank_3: Ankyrin repeat
Probab=98.31 E-value=6.3e-07 Score=62.93 Aligned_cols=30 Identities=43% Similarity=0.644 Sum_probs=28.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCccc
Q 004887 99 QHRTPLMVAAEYGSVDVVKLILSLTKADVNL 129 (725)
Q Consensus 99 ~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~ 129 (725)
+|+||||+||..|+.++|++||++ |+|||.
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~-gadvn~ 30 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEH-GADVNA 30 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHc-CCCCCC
Confidence 589999999999999999999999 999984
No 99
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.25 E-value=1.3e-06 Score=97.08 Aligned_cols=80 Identities=26% Similarity=0.298 Sum_probs=66.7
Q ss_pred hHHHHHHHcCCHHHHHHHH-hcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHh
Q 004887 102 TPLMVAAEYGSVDVVKLIL-SLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVV 180 (725)
Q Consensus 102 TPLh~Aa~~G~~eiVk~LL-e~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~ 180 (725)
-|||+++.....+-+..++ ......|+.+ |..|.||||+|+..|+ .+.+++|+.+|||+.++|++|++|||.|+.
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~-D~~g~TpLhlAV~Lg~---~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~ 97 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRR-DPPGRTPLHLAVRLGH---VEAARILLSAGADVSIKNNEGWSPLHEAVS 97 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhhceeccc-cCCCCccHHHHHHhcC---HHHHHHHHhcCCCccccccccccHHHHHHH
Confidence 4689998888776555533 2236678888 8999999999999999 999999999999999999999999999999
Q ss_pred CCCCC
Q 004887 181 HPNVP 185 (725)
Q Consensus 181 ~g~~e 185 (725)
.|+-+
T Consensus 98 ~g~~q 102 (560)
T KOG0522|consen 98 TGNEQ 102 (560)
T ss_pred cCCHH
Confidence 86554
No 100
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.19 E-value=1.8e-06 Score=61.64 Aligned_cols=31 Identities=45% Similarity=0.599 Sum_probs=29.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccc
Q 004887 99 QHRTPLMVAAEYGSVDVVKLILSLTKADVNLT 130 (725)
Q Consensus 99 ~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~ 130 (725)
+|+||||+|+..|+.+++++||++ |++++.+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~-ga~~~~~ 31 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKH-GADINAR 31 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHT-TSCTTCB
T ss_pred CcccHHHHHHHHHHHHHHHHHHHC-cCCCCCC
Confidence 589999999999999999999999 9999987
No 101
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.19 E-value=3.3e-06 Score=94.28 Aligned_cols=91 Identities=32% Similarity=0.399 Sum_probs=77.7
Q ss_pred HHHHHHcCCHHHHHHHHhcCCC--Cccccc-CCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHh
Q 004887 104 LMVAAEYGSVDVVKLILSLTKA--DVNLTC-GLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVV 180 (725)
Q Consensus 104 Lh~Aa~~G~~eiVk~LLe~~Ga--dVN~~~-d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~ 180 (725)
|.-|+...++..+-+||.+ |. .+|..| +.+|+|+||+||..|+ +.+.++|+=+|+|+.++|.+|+|+|.||-.
T Consensus 628 Ll~A~~~~Dl~t~~lLLAh-g~~~e~~~t~~~~~grt~LHLa~~~gn---Vvl~QLLiWyg~dv~~rda~g~t~l~yar~ 703 (749)
T KOG0705|consen 628 LLRAVAAEDLQTAILLLAH-GSREEVNETCGEGDGRTALHLAARKGN---VVLAQLLIWYGVDVMARDAHGRTALFYARQ 703 (749)
T ss_pred HHHHHHHHHHHHHHHHHhc-cCchhhhccccCCCCcchhhhhhhhcc---hhHHHHHHHhCccceecccCCchhhhhHhh
Confidence 5667777888888899988 53 455554 4577999999999999 999999999999999999999999999998
Q ss_pred CCCCCCHHHHHHHHHHCCCCCC
Q 004887 181 HPNVPDSRVSLEDLLKNGGSVS 202 (725)
Q Consensus 181 ~g~~e~~~~ivelLL~~Gadvn 202 (725)
. +..+++.+||.+|+--+
T Consensus 704 a----~sqec~d~llq~gcp~e 721 (749)
T KOG0705|consen 704 A----GSQECIDVLLQYGCPDE 721 (749)
T ss_pred c----ccHHHHHHHHHcCCCcc
Confidence 6 66779999999997543
No 102
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.06 E-value=5.6e-06 Score=91.93 Aligned_cols=92 Identities=28% Similarity=0.288 Sum_probs=74.0
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCC-cccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKAD-VNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFD 176 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~Gad-VN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLh 176 (725)
.+.+|.||+|+..|+-+||+|||+++... ++.. +..|.|+||-|+..++ ..++.+|+++||.+...|..|.||-.
T Consensus 897 ~~~~sllh~a~~tg~~eivkyildh~p~elld~~-de~get~lhkaa~~~~---r~vc~~lvdagasl~ktd~kg~tp~e 972 (1004)
T KOG0782|consen 897 PDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMA-DETGETALHKAACQRN---RAVCQLLVDAGASLRKTDSKGKTPQE 972 (1004)
T ss_pred cchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHH-hhhhhHHHHHHHHhcc---hHHHHHHHhcchhheecccCCCChHH
Confidence 56678899999999999999999983333 3445 7889999999888888 88999999999999889999999998
Q ss_pred HHHhCCCCCCHHHHHHHHHHC
Q 004887 177 VIVVHPNVPDSRVSLEDLLKN 197 (725)
Q Consensus 177 lA~~~g~~e~~~~ivelLL~~ 197 (725)
-|-+.|+.+ +..+|-.+
T Consensus 973 raqqa~d~d----laayle~r 989 (1004)
T KOG0782|consen 973 RAQQAGDPD----LAAYLESR 989 (1004)
T ss_pred HHHhcCCch----HHHHHhhh
Confidence 888875554 77777543
No 103
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=97.96 E-value=5.5e-06 Score=90.76 Aligned_cols=77 Identities=30% Similarity=0.171 Sum_probs=66.7
Q ss_pred hHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCC
Q 004887 82 MIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAG 161 (725)
Q Consensus 82 ~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~G 161 (725)
...-++-.+.+....|.+.+|+||+||..|+++++|+||+.+++|++.+ |.+|+|||--|...++ .+++++|-++-
T Consensus 521 alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~k-DRw~rtPlDdA~~F~h---~~v~k~L~~~~ 596 (622)
T KOG0506|consen 521 ALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPK-DRWGRTPLDDAKHFKH---KEVVKLLEEAQ 596 (622)
T ss_pred HHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChh-hccCCCcchHhHhcCc---HHHHHHHHHHh
Confidence 3334444455666677899999999999999999999999999999999 9999999999999999 99999998764
Q ss_pred C
Q 004887 162 A 162 (725)
Q Consensus 162 A 162 (725)
-
T Consensus 597 ~ 597 (622)
T KOG0506|consen 597 Y 597 (622)
T ss_pred c
Confidence 3
No 104
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.96 E-value=1e-05 Score=96.72 Aligned_cols=80 Identities=34% Similarity=0.412 Sum_probs=76.8
Q ss_pred hcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHH
Q 004887 97 VLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFD 176 (725)
Q Consensus 97 ~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLh 176 (725)
...|.|+||.|+.+|...++++||+. |+++|.. |..|+||||.+...|+ ...+.+|++.||+.++.|.+|.+||+
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~-ga~vn~~-d~~g~~plh~~~~~g~---~~~~~~ll~~~a~~~a~~~~~~~~l~ 727 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQN-GADVNAL-DSKGRTPLHHATASGH---TSIACLLLKRGADPNAFDPDGKLPLD 727 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhc-CCcchhh-hccCCCcchhhhhhcc---cchhhhhccccccccccCccCcchhh
Confidence 35789999999999999999999999 9999999 9999999999999999 99999999999999999999999999
Q ss_pred HHHhC
Q 004887 177 VIVVH 181 (725)
Q Consensus 177 lA~~~ 181 (725)
+|...
T Consensus 728 ~a~~~ 732 (785)
T KOG0521|consen 728 IAMEA 732 (785)
T ss_pred HHhhh
Confidence 99876
No 105
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=97.93 E-value=5.4e-06 Score=86.38 Aligned_cols=69 Identities=29% Similarity=0.551 Sum_probs=57.8
Q ss_pred ccCc--CCCCCcC-CCCCCC---CCccccc---CCccccccC--CcccccccCCCC---CCCCCC-ccccCCCcCccccc
Q 004887 307 HYSC--MPCPDHR-KGACSR---GDMCEYA---HGIFESWLH--PAQYRTKLCKDG---TSCMRR-VCFFAHALDELRPL 371 (725)
Q Consensus 307 ~Ykt--~~Cp~~~-~g~C~~---Gd~C~ya---H~~~E~~~h--P~~ykt~~C~~~---~~C~~~-~C~faH~~~elr~~ 371 (725)
-|++ ..|..|. +|.|++ |+.|+|+ ||.-|+..- -..|||++|..| +.|+|+ +|.|+||.+++-.+
T Consensus 225 L~kt~~~lc~~ft~kg~~p~~~sG~~~q~a~~~HGlN~l~~k~k~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~ie~ 304 (351)
T COG5063 225 LYKTNPELCESFTRKGTCPYWISGVKCQFACRGHGLNELKSKKKKQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDIEM 304 (351)
T ss_pred hhcCCHHHhhccCcCCCCccccccccccccccccccccccccccccccccCCccchhhcccCccccccccccCChhhccc
Confidence 4566 8999995 899998 9999999 997776653 557999999998 579997 59999999999887
Q ss_pred ccCC
Q 004887 372 YAST 375 (725)
Q Consensus 372 ~~~~ 375 (725)
|--+
T Consensus 305 ~~~~ 308 (351)
T COG5063 305 YEEA 308 (351)
T ss_pred cccc
Confidence 7654
No 106
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=97.92 E-value=5.2e-06 Score=91.25 Aligned_cols=92 Identities=23% Similarity=0.239 Sum_probs=77.8
Q ss_pred CCCCch------HHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCC-CCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCc
Q 004887 132 GLDKST------ALHCAASGGSVNAVDVVKLLLFAGADSNLTDA-HGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFD 204 (725)
Q Consensus 132 d~~G~T------pLH~Aa~~G~~~~~eiVklLL~~GADin~~D~-~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~ 204 (725)
|.+|.| -||-.++.|+ .++.-.||..||++|..+. .|.||||+|++.|+. .-+|+|+-+|||++.
T Consensus 124 DdD~~~~~~LsrQLhasvRt~n---let~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~----~Q~ElL~vYGAD~~a- 195 (669)
T KOG0818|consen 124 DDDSVTAKDLSKQLHSSVRTGN---LETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQI----LQAELLAVYGADPGA- 195 (669)
T ss_pred CcchhhHHHHHHHHHHHhhccc---HHHHHHHHHcccccCCCCcccCCchhHHHHhccch----hhhhHHhhccCCCCC-
Confidence 555554 5899999999 9999999999999998875 699999999997554 489999999999984
Q ss_pred cccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCCcc
Q 004887 205 ELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLPDI 258 (725)
Q Consensus 205 d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lpdi 258 (725)
.|.+|.||+.+|-..||-++...|.++
T Consensus 196 ---------------------------~d~~GmtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 196 ---------------------------QDSSGMTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred ---------------------------CCCCCCcHHHHHHhcCchHHHHHHHHH
Confidence 566677889999999999998777665
No 107
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=97.84 E-value=3.2e-05 Score=86.64 Aligned_cols=62 Identities=31% Similarity=0.355 Sum_probs=58.8
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCC
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADS 164 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADi 164 (725)
.+|+|+||+||..|++.+.++||-+ |+|+-++ |..|+|+|.||-+.|. .|++.+||.+|+-.
T Consensus 659 ~~grt~LHLa~~~gnVvl~QLLiWy-g~dv~~r-da~g~t~l~yar~a~s---qec~d~llq~gcp~ 720 (749)
T KOG0705|consen 659 GDGRTALHLAARKGNVVLAQLLIWY-GVDVMAR-DAHGRTALFYARQAGS---QECIDVLLQYGCPD 720 (749)
T ss_pred CCCcchhhhhhhhcchhHHHHHHHh-Cccceec-ccCCchhhhhHhhccc---HHHHHHHHHcCCCc
Confidence 5789999999999999999999998 9999999 9999999999999999 99999999999754
No 108
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=97.79 E-value=3.7e-05 Score=85.66 Aligned_cols=100 Identities=18% Similarity=0.245 Sum_probs=81.8
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCC--CCCcCCCCCcHHHHHHhC
Q 004887 104 LMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGAD--SNLTDAHGNRPFDVIVVH 181 (725)
Q Consensus 104 Lh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GAD--in~~D~~G~TPLhlA~~~ 181 (725)
|.-|+..+++--++.+-.. |-++-.+ +.+..|.||+|+..|+ -+||++||++|.. ++..|..|.|+||-|+..
T Consensus 870 il~av~~~D~~klqE~h~~-gg~ll~~-~~~~~sllh~a~~tg~---~eivkyildh~p~elld~~de~get~lhkaa~~ 944 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLN-GGSLLIQ-GPDHCSLLHYAAKTGN---GEIVKYILDHGPSELLDMADETGETALHKAACQ 944 (1004)
T ss_pred HHHHHHhccHHHHHHHHhc-CCceEee-CcchhhHHHHHHhcCC---hHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHh
Confidence 4555666655444444445 7777777 8999999999999999 9999999999854 677889999999999886
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCccccccccc
Q 004887 182 PNVPDSRVSLEDLLKNGGSVSFDELQVSSVD 212 (725)
Q Consensus 182 g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~ 212 (725)
..+.+..+|++.|+.+-.+|..|.||.
T Consensus 945 ----~~r~vc~~lvdagasl~ktd~kg~tp~ 971 (1004)
T KOG0782|consen 945 ----RNRAVCQLLVDAGASLRKTDSKGKTPQ 971 (1004)
T ss_pred ----cchHHHHHHHhcchhheecccCCCChH
Confidence 556699999999999998888888884
No 109
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.75 E-value=7.8e-05 Score=80.03 Aligned_cols=73 Identities=32% Similarity=0.265 Sum_probs=64.9
Q ss_pred ChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Q 004887 101 RTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVI 178 (725)
Q Consensus 101 ~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA 178 (725)
.--|..||..|..+.|++|++. |++||.+ |.....||.+|+..|| .++|++||++||-...-..+|...+.-|
T Consensus 37 f~elceacR~GD~d~v~~LVet-gvnVN~v-D~fD~spL~lAsLcGH---e~vvklLLenGAiC~rdtf~G~RC~Yga 109 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVET-GVNVNAV-DRFDSSPLYLASLCGH---EDVVKLLLENGAICSRDTFDGDRCHYGA 109 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHh-CCCcchh-hcccccHHHHHHHcCc---HHHHHHHHHcCCcccccccCcchhhhhh
Confidence 3457899999999999999998 9999999 9999999999999999 9999999999998876667788775443
No 110
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.67 E-value=2.6e-05 Score=91.36 Aligned_cols=150 Identities=19% Similarity=0.196 Sum_probs=110.0
Q ss_pred CChHHHHHHHcCCHHHHHHHHhcCC---CCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHH
Q 004887 100 HRTPLMVAAEYGSVDVVKLILSLTK---ADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFD 176 (725)
Q Consensus 100 G~TPLh~Aa~~G~~eiVk~LLe~~G---adVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLh 176 (725)
+.--...|+++|+...|+.+|+... .++|.. |.-|+++||+|+.+.+ .+++++|++.+..+ | .+|.
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~-d~lGr~al~iai~nen---le~~eLLl~~~~~~------g-dALL 93 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAVSKLNINCR-DPLGRLALHIAIDNEN---LELQELLLDTSSEE------G-DALL 93 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccccccchhcc-ChHhhhceeccccccc---HHHHHHHhcCcccc------c-hHHH
Confidence 4445678999999999999998733 478888 9999999999999999 99999999987665 3 4788
Q ss_pred HHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCC
Q 004887 177 VIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLP 256 (725)
Q Consensus 177 lA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lp 256 (725)
+|+.. +...++|+++.+-.........+.++. ..-..+-|||++|+...+|+|+..|.
T Consensus 94 ~aI~~----~~v~~VE~ll~~~~~~~~~~~~~d~~~------------------~~ft~ditPliLAAh~NnyEil~~Ll 151 (822)
T KOG3609|consen 94 LAIAV----GSVPLVELLLVHFVDAPYLERSGDANS------------------PHFTPDITPLMLAAHLNNFEILQCLL 151 (822)
T ss_pred HHHHH----HHHHHHHHHHhcccccchhccccccCc------------------ccCCCCccHHHHHHHhcchHHHHHHH
Confidence 88885 667799999988655433222111110 11233559999999999999999888
Q ss_pred ccccccccchhhhhccccccccccccCCC
Q 004887 257 DIKDSIYASDEFRMYSFKIRPCSRAYSHD 285 (725)
Q Consensus 257 di~~~iy~~Defrm~~fkv~~Csr~~~hd 285 (725)
+-+..+-...+.|.. +..|.+...+|
T Consensus 152 ~kg~~i~~PH~~~C~---C~~C~~~~~~d 177 (822)
T KOG3609|consen 152 TRGHCIPIPHDIRCE---CKTCKRETVTD 177 (822)
T ss_pred HcCCCCCCCcccccC---chHhhhccccC
Confidence 888887776666653 33455444433
No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.60 E-value=0.00014 Score=71.81 Aligned_cols=75 Identities=24% Similarity=0.141 Sum_probs=62.1
Q ss_pred CCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCC-CCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCC
Q 004887 91 RLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTK-ADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDA 169 (725)
Q Consensus 91 ~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~G-adVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~ 169 (725)
.+++..|..|+|+||.|+..|..+++.+||.+ | ++|-.. |..|.+++.+|-+.|. .++|+.|.+.-.+-...++
T Consensus 3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgr-g~a~vgv~-d~ssldaaqlaek~g~---~~fvh~lfe~~~ets~p~n 77 (223)
T KOG2384|consen 3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGR-GVAFVGVT-DESSLDAAQLAEKGGA---QAFVHSLFENDRETSHPMN 77 (223)
T ss_pred CCccchhhhcchHHHHHhhhcchhHHHHHhcc-Cccccccc-ccccchHHHHHHhcCh---HHHHHHHHHHhccCCCccc
Confidence 35666788899999999999999999999999 7 888887 8999999999999998 8999999888655555444
Q ss_pred C
Q 004887 170 H 170 (725)
Q Consensus 170 ~ 170 (725)
.
T Consensus 78 s 78 (223)
T KOG2384|consen 78 S 78 (223)
T ss_pred C
Confidence 3
No 112
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.59 E-value=0.00011 Score=72.63 Aligned_cols=67 Identities=27% Similarity=0.265 Sum_probs=60.6
Q ss_pred CCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCC-CCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCC
Q 004887 124 KADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAG-ADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNG 198 (725)
Q Consensus 124 GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~G-ADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~G 198 (725)
+.+||.+ |..|||||++|+..|. .+.|.+|+.+| +++...|..|.+++.+|-+.| ..+++..|.+.-
T Consensus 2 e~~in~r-D~fgWTalmcaa~eg~---~eavsyllgrg~a~vgv~d~ssldaaqlaek~g----~~~fvh~lfe~~ 69 (223)
T KOG2384|consen 2 EGNINAR-DAFGWTALMCAAMEGS---NEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGG----AQAFVHSLFEND 69 (223)
T ss_pred CCCccch-hhhcchHHHHHhhhcc---hhHHHHHhccCcccccccccccchHHHHHHhcC----hHHHHHHHHHHh
Confidence 5789999 9999999999999999 99999999999 999999999999999999974 455888887763
No 113
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=97.53 E-value=0.00014 Score=81.43 Aligned_cols=66 Identities=27% Similarity=0.371 Sum_probs=57.9
Q ss_pred hCCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHC
Q 004887 90 QRLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFA 160 (725)
Q Consensus 90 ~~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~ 160 (725)
...+...|..|+||||+|+..|+.+.++.||.. |+|+-.+ +.+||+|||-|+..|+ .+++..+|.+
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a-~Adv~~k-N~~gWs~L~EAv~~g~---~q~i~~vlr~ 110 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSA-GADVSIK-NNEGWSPLHEAVSTGN---EQIITEVLRH 110 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhc-CCCcccc-ccccccHHHHHHHcCC---HHHHHHHHHH
Confidence 344556678899999999999999999999999 9999999 9999999999999999 7777666654
No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=97.51 E-value=6.8e-05 Score=89.86 Aligned_cols=81 Identities=25% Similarity=0.202 Sum_probs=66.9
Q ss_pred CCCcccc-cCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCC
Q 004887 124 KADVNLT-CGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVS 202 (725)
Q Consensus 124 GadVN~~-~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn 202 (725)
++++|.. .-..|.|+||.|+..|. .-++++||+.|+++|.+|..|+||||.+...|+.. ++.+|+++|++.+
T Consensus 644 ~~~~n~~~~~~~~~s~lh~a~~~~~---~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~----~~~~ll~~~a~~~ 716 (785)
T KOG0521|consen 644 GCCENWPVVLCIGCSLLHVAVGTGD---SGAVELLLQNGADVNALDSKGRTPLHHATASGHTS----IACLLLKRGADPN 716 (785)
T ss_pred hhhhccchhhhcccchhhhhhccch---HHHHHHHHhcCCcchhhhccCCCcchhhhhhcccc----hhhhhcccccccc
Confidence 5555542 03468999999999999 99999999999999999999999999999987766 9999999999998
Q ss_pred Ccccccccc
Q 004887 203 FDELQVSSV 211 (725)
Q Consensus 203 ~~d~~g~Tp 211 (725)
..+..|.++
T Consensus 717 a~~~~~~~~ 725 (785)
T KOG0521|consen 717 AFDPDGKLP 725 (785)
T ss_pred ccCccCcch
Confidence 644444433
No 115
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.36 E-value=0.00016 Score=86.55 Aligned_cols=128 Identities=15% Similarity=0.097 Sum_probs=96.6
Q ss_pred cCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHH-CCCCCCCcCCCCCcHHH
Q 004887 98 LQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLF-AGADSNLTDAHGNRPFD 176 (725)
Q Consensus 98 ~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~-~GADin~~D~~G~TPLh 176 (725)
..|+|-||+++..+..-.++.+++..|...+.. +.+|.-.+|+++..|. +.+-+|+. .|..++++|.+|+||||
T Consensus 572 ~r~~lllhL~a~~lyawLie~~~e~~~~~~~el-d~d~qgV~hfca~lg~----ewA~ll~~~~~~ai~i~D~~G~tpL~ 646 (975)
T KOG0520|consen 572 FRDMLLLHLLAELLYAWLIEKVIEWAGSGDLEL-DRDGQGVIHFCAALGY----EWAFLPISADGVAIDIRDRNGWTPLH 646 (975)
T ss_pred CcchHHHHHHHHHhHHHHHHHHhcccccCchhh-cccCCChhhHhhhcCC----ceeEEEEeecccccccccCCCCcccc
Confidence 679999999999999999999998534444444 7788888999666665 55555554 58999999999999999
Q ss_pred HHHhCCCCCCHHHHHHHHHHCCCCCCCccccccccccccccCCCCCCCCCCCccccccCCCCcccccccCCCcCccCCCC
Q 004887 177 VIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSSVDLRSSSSLSSSSDDSSLSSLTCKSDDVHAFVAPEKKEYPIDPSLP 256 (725)
Q Consensus 177 lA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~Tp~~~ass~ls~s~~~~~~~~~~~~~G~TpL~~A~e~g~~~vd~~Lp 256 (725)
+|+.. ++.+++..|+..|++.... .+. .-..-.|.|+..+|..+|+-.+.-+|-
T Consensus 647 wAa~~----G~e~l~a~l~~lga~~~~~-tdp---------------------s~~~p~g~ta~~la~s~g~~gia~~ls 700 (975)
T KOG0520|consen 647 WAAFR----GREKLVASLIELGADPGAV-TDP---------------------SPETPGGKTAADLARANGHKGIAGYLS 700 (975)
T ss_pred hHhhc----CHHHHHHHHHHhccccccc-cCC---------------------CCCCCCCCchhhhhhcccccchHHHHh
Confidence 99997 6667999999988877621 000 123345677777787888888765554
No 116
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=97.33 E-value=0.00015 Score=86.64 Aligned_cols=125 Identities=18% Similarity=0.088 Sum_probs=90.6
Q ss_pred CCCChHHHHHHHcCChhhhcCchhhhhcccCCCCCCCCCCCccchhHHHHHHhhCCchhhhcCCChHHHHHHHcCCHHHH
Q 004887 37 INDRTLLILLFFQNYLIMCGGSEKLSSKALAPSASPPSKPSLQRNMIGLWYSFQRLSKKIVLQHRTPLMVAAEYGSVDVV 116 (725)
Q Consensus 37 ~~G~TpLHlAa~~g~~ei~ga~~~l~~~lL~~aa~~~~~~~~~~~~~~L~~a~~~g~~~~~~~G~TPLh~Aa~~G~~eiV 116 (725)
..|.|.||+++..++....++..+. ++.+..+.+.+|.--+|+ |..+++++.
T Consensus 572 ~r~~lllhL~a~~lyawLie~~~e~---------------------------~~~~~~eld~d~qgV~hf-ca~lg~ewA 623 (975)
T KOG0520|consen 572 FRDMLLLHLLAELLYAWLIEKVIEW---------------------------AGSGDLELDRDGQGVIHF-CAALGYEWA 623 (975)
T ss_pred CcchHHHHHHHHHhHHHHHHHHhcc---------------------------cccCchhhcccCCChhhH-hhhcCCcee
Confidence 3788999988866554444332211 223334445566667777 666777777
Q ss_pred HHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCC------cCCCCCcHHHHHHhCCCCCCHHHH
Q 004887 117 KLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNL------TDAHGNRPFDVIVVHPNVPDSRVS 190 (725)
Q Consensus 117 k~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~------~D~~G~TPLhlA~~~g~~e~~~~i 190 (725)
-+|+...|..++.+ |..|+||||+|+..|+ ..++..|++.|++... .+-.|.|+..+|..+|+.. +
T Consensus 624 ~ll~~~~~~ai~i~-D~~G~tpL~wAa~~G~---e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~g----i 695 (975)
T KOG0520|consen 624 FLPISADGVAIDIR-DRNGWTPLHWAAFRGR---EKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKG----I 695 (975)
T ss_pred EEEEeecccccccc-cCCCCcccchHhhcCH---HHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccc----h
Confidence 77766669999999 9999999999999999 9999999988876543 3456999999999886655 6
Q ss_pred HHHHHHC
Q 004887 191 LEDLLKN 197 (725)
Q Consensus 191 velLL~~ 197 (725)
..+|-+.
T Consensus 696 a~~lse~ 702 (975)
T KOG0520|consen 696 AGYLSEK 702 (975)
T ss_pred HHHHhhh
Confidence 6665554
No 117
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=97.10 E-value=0.0006 Score=80.24 Aligned_cols=97 Identities=23% Similarity=0.205 Sum_probs=78.7
Q ss_pred CCchhhhcCCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCC------
Q 004887 91 RLSKKIVLQHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAGADS------ 164 (725)
Q Consensus 91 ~g~~~~~~~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADi------ 164 (725)
.+++.+|.-|+++|++|+.+.+.+++++||++ +..+ .-+|.+|+..|. +++|++|+.+-.+.
T Consensus 53 lninc~d~lGr~al~iai~nenle~~eLLl~~-~~~~--------gdALL~aI~~~~---v~~VE~ll~~~~~~~~~~~~ 120 (822)
T KOG3609|consen 53 LNINCRDPLGRLALHIAIDNENLELQELLLDT-SSEE--------GDALLLAIAVGS---VPLVELLLVHFVDAPYLERS 120 (822)
T ss_pred cchhccChHhhhceecccccccHHHHHHHhcC-cccc--------chHHHHHHHHHH---HHHHHHHHhcccccchhccc
Confidence 34555677899999999999999999999999 4443 358999999999 99999999873322
Q ss_pred ----CCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCC
Q 004887 165 ----NLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSF 203 (725)
Q Consensus 165 ----n~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~ 203 (725)
...-..+-|||.+||...|++ |+++||++|+.+..
T Consensus 121 ~d~~~~~ft~ditPliLAAh~NnyE----il~~Ll~kg~~i~~ 159 (822)
T KOG3609|consen 121 GDANSPHFTPDITPLMLAAHLNNFE----ILQCLLTRGHCIPI 159 (822)
T ss_pred cccCcccCCCCccHHHHHHHhcchH----HHHHHHHcCCCCCC
Confidence 122346789999999986666 99999999999865
No 118
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.92 E-value=0.0014 Score=70.73 Aligned_cols=68 Identities=25% Similarity=0.297 Sum_probs=59.3
Q ss_pred chHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHCCCCCCCccccccc
Q 004887 136 STALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKNGGSVSFDELQVSS 210 (725)
Q Consensus 136 ~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~Gadvn~~d~~g~T 210 (725)
.--|..||+.|. ++.|+.|++.|.++|.+|.....||.+|+..||.. ++++||++||-......+|.-
T Consensus 37 f~elceacR~GD---~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~----vvklLLenGAiC~rdtf~G~R 104 (516)
T KOG0511|consen 37 FGELCEACRAGD---VDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHED----VVKLLLENGAICSRDTFDGDR 104 (516)
T ss_pred hHHHHHHhhccc---HHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHH----HHHHHHHcCCcccccccCcch
Confidence 446889999999 99999999999999999999999999999986655 999999999887665555543
No 119
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=96.87 E-value=0.00032 Score=74.44 Aligned_cols=66 Identities=27% Similarity=0.544 Sum_probs=55.5
Q ss_pred CCCCCcCCCCCCCCCc-ccccCCccccccCCcccccccCCCC--CCCCCCccccCCCcCcccccccCCCCC
Q 004887 311 MPCPDHRKGACSRGDM-CEYAHGIFESWLHPAQYRTKLCKDG--TSCMRRVCFFAHALDELRPLYASTGSG 378 (725)
Q Consensus 311 ~~Cp~~~~g~C~~Gd~-C~yaH~~~E~~~hP~~ykt~~C~~~--~~C~~~~C~faH~~~elr~~~~~~~~~ 378 (725)
..|.+|.++.|.+||. |.|+|...- .+-..-|-.-|-++ +.|.|..|.|+|.+.+++.-|.-+|--
T Consensus 38 eVCReF~rn~C~R~d~~CkfaHP~~~--~~V~~g~v~aC~Ds~kgrCsR~nCkylHpp~hlkdql~ingrn 106 (331)
T KOG2494|consen 38 EVCREFLRNTCSRGDRECKFAHPPKN--CQVSNGRVIACFDSQKGRCSRENCKYLHPPQHLKDQLKINGRN 106 (331)
T ss_pred HHHHHHHhccccCCCccccccCCCCC--CCccCCeEEEEeccccCccCcccceecCCChhhhhhhhhcccc
Confidence 4899999999999998 999998662 23445666779987 579999999999999999998888854
No 120
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=96.54 E-value=0.00046 Score=47.27 Aligned_cols=25 Identities=40% Similarity=0.913 Sum_probs=16.4
Q ss_pred cCcCCCCCcCC-CCCCCCCcccccCC
Q 004887 308 YSCMPCPDHRK-GACSRGDMCEYAHG 332 (725)
Q Consensus 308 Ykt~~Cp~~~~-g~C~~Gd~C~yaH~ 332 (725)
|++.+|+.|.+ |.|++|+.|.|+|+
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~ 26 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHG 26 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSS
T ss_pred CccccChhhccCCccCCCCCcCccCC
Confidence 56777887754 78888888888886
No 121
>KOG1677 consensus CCCH-type Zn-finger protein [General function prediction only]
Probab=96.47 E-value=0.0022 Score=70.02 Aligned_cols=66 Identities=29% Similarity=0.511 Sum_probs=48.5
Q ss_pred ccccccc----cccCCC-CCCCCCCCCCCcccC-----CCCccCccCcCCCCCcCC-CCCCCCCcccccCCcccccc
Q 004887 273 FKIRPCS----RAYSHD-WTECPFAHPGENARR-----RDPRKFHYSCMPCPDHRK-GACSRGDMCEYAHGIFESWL 338 (725)
Q Consensus 273 fkv~~Cs----r~~~hd-~~eCp~~H~~E~arr-----r~Pr~y~Ykt~~Cp~~~~-g~C~~Gd~C~yaH~~~E~~~ 338 (725)
|+...|. .+.+.. ...|-|+|..+..+. ..-...+|++++|+.|.+ |.|++|..|.|.|+..|...
T Consensus 130 ~kt~lc~~~~~~g~c~y~ge~crfah~~~e~r~~~~~~~~~~~~~~kt~lC~~f~~tG~C~yG~rC~F~H~~~~~~~ 206 (332)
T KOG1677|consen 130 YKTPLCRSFRKSGTCKYRGEQCRFAHGLEELRLPSSENQVGNPPKYKTKLCPKFQKTGLCKYGSRCRFIHGEPEDRA 206 (332)
T ss_pred ccCCcceeeecCccccccCchhhhcCCcccccccccchhhcCCCCCCCcCCCccccCCCCCCCCcCeecCCCccccc
Confidence 4445554 333444 567999997654442 344667999999999975 99999999999999887764
No 122
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.11 E-value=0.0086 Score=66.89 Aligned_cols=64 Identities=27% Similarity=0.338 Sum_probs=55.1
Q ss_pred HHHHHHHHhcCCCCccccc-----CCCCchHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHh
Q 004887 113 VDVVKLILSLTKADVNLTC-----GLDKSTALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVV 180 (725)
Q Consensus 113 ~eiVk~LLe~~GadVN~~~-----d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~ 180 (725)
...|++|.+. +++.|... +..-.|+||+|+..|. .++|.+||+.|+|+..+|..|.||..++..
T Consensus 404 p~~ie~lken-~lsgnf~~~pe~~~~ltsT~LH~aa~qg~---~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~n 472 (591)
T KOG2505|consen 404 PDSIEALKEN-LLSGNFDVTPEANDYLTSTFLHYAAAQGA---RKCVKYFLEEGCDPSTKDGAGRTPYSLSAN 472 (591)
T ss_pred hhHHHHHHhc-CCcccccccccccccccchHHHHHHhcch---HHHHHHHHHhcCCchhcccCCCCccccccc
Confidence 5678888888 88776532 3346799999999999 999999999999999999999999999864
No 123
>COG5063 CTH1 CCCH-type Zn-finger protein [General function prediction only]
Probab=96.05 E-value=0.0074 Score=63.53 Aligned_cols=83 Identities=23% Similarity=0.414 Sum_probs=61.0
Q ss_pred CCCCCCC---CCCCcccCCCCccCccCcCCCCCcC-CCCCCCCCcccccCCcccccc---CC-cccccccCCC---CCCC
Q 004887 286 WTECPFA---HPGENARRRDPRKFHYSCMPCPDHR-KGACSRGDMCEYAHGIFESWL---HP-AQYRTKLCKD---GTSC 354 (725)
Q Consensus 286 ~~eCp~~---H~~E~arrr~Pr~y~Ykt~~Cp~~~-~g~C~~Gd~C~yaH~~~E~~~---hP-~~ykt~~C~~---~~~C 354 (725)
...|.|+ | |-+.....-.+-.|+|++|.++. -|.|++|..|.|+||..|..- |+ .-|+...|+. ++.|
T Consensus 248 G~~~q~a~~~H-GlN~l~~k~k~~~frTePcinwe~sGyc~yg~Rc~F~hgd~~~ie~~~~~~~~y~~~~crt~~~~g~~ 326 (351)
T COG5063 248 GVKCQFACRGH-GLNELKSKKKKQNFRTEPCINWEKSGYCPYGLRCCFKHGDDSDIEMYEEASLGYLDGPCRTRAKGGAF 326 (351)
T ss_pred ccccccccccc-ccccccccccccccccCCccchhhcccCccccccccccCChhhccccccccccccccccccccccCcc
Confidence 3346666 6 33444455566789999999997 689999999999999855443 44 3588899997 4689
Q ss_pred CCC-ccccCCCcCccc
Q 004887 355 MRR-VCFFAHALDELR 369 (725)
Q Consensus 355 ~~~-~C~faH~~~elr 369 (725)
+++ .|.|-|...-+-
T Consensus 327 p~g~~~c~~~dkkn~~ 342 (351)
T COG5063 327 PSGGAVCKSFDKKNLD 342 (351)
T ss_pred CCCCchhhccccchhh
Confidence 985 588888765543
No 124
>smart00356 ZnF_C3H1 zinc finger.
Probab=96.02 E-value=0.0051 Score=41.56 Aligned_cols=25 Identities=36% Similarity=0.846 Sum_probs=21.1
Q ss_pred cCcCCCCCcCCCCCCCCCcccccCC
Q 004887 308 YSCMPCPDHRKGACSRGDMCEYAHG 332 (725)
Q Consensus 308 Ykt~~Cp~~~~g~C~~Gd~C~yaH~ 332 (725)
|++.+|+.|.+|.|.+|+.|.|.|.
T Consensus 2 ~k~~~C~~~~~g~C~~g~~C~~~H~ 26 (27)
T smart00356 2 YKTELCKFFKRGYCPYGDRCKFAHP 26 (27)
T ss_pred CCCCcCcCccCCCCCCCCCcCCCCc
Confidence 5677899888888999999999886
No 125
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.00 E-value=0.011 Score=38.27 Aligned_cols=27 Identities=56% Similarity=0.696 Sum_probs=12.9
Q ss_pred CchHHHHHHhCCCCCHHHHHHHHHHCCCCC
Q 004887 135 KSTALHCAASGGSVNAVDVVKLLLFAGADS 164 (725)
Q Consensus 135 G~TpLH~Aa~~G~~~~~eiVklLL~~GADi 164 (725)
|.||||+|+..++ .+++++|++.|.++
T Consensus 2 ~~~~l~~~~~~~~---~~~~~~ll~~~~~~ 28 (30)
T smart00248 2 GRTPLHLAAENGN---LEVVKLLLDKGADI 28 (30)
T ss_pred CCCHHHHHHHcCC---HHHHHHHHHcCCCC
Confidence 3444555544444 45555555444433
No 126
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.82 E-value=0.014 Score=37.74 Aligned_cols=29 Identities=55% Similarity=0.803 Sum_probs=26.2
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcc
Q 004887 99 QHRTPLMVAAEYGSVDVVKLILSLTKADVN 128 (725)
Q Consensus 99 ~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN 128 (725)
.|.||||+|+..++.+++++|++. +.+++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~-~~~~~ 29 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDK-GADIN 29 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHc-CCCCC
Confidence 478999999999999999999998 77765
No 127
>PF00642 zf-CCCH: Zinc finger C-x8-C-x5-C-x3-H type (and similar); InterPro: IPR000571 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents C-x8-C-x5-C-x3-H (CCCH) type Zinc finger (Znf) domains. Proteins containing CCCH Znf domains include Znf proteins from eukaryotes involved in cell cycle or growth phase-related regulation, e.g. human TIS11B (butyrate response factor 1), a probable regulatory protein involved in regulating the response to growth factors, and the mouse TTP growth factor-inducible nuclear protein, which has the same function. The mouse TTP protein is induced by growth factors. Another protein containing this domain is the human splicing factor U2AF 35kDa subunit, which plays a critical role in both constitutive and enhancer-dependent splicing by mediating essential protein-protein interactions and protein-RNA interactions required for 3' splice site selection. It has been shown that different CCCH-type Znf proteins interact with the 3'-untranslated region of various mRNA [, ]. This type of Znf is very often present in two copies. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003676 nucleic acid binding, 0008270 zinc ion binding; PDB: 1M9O_A 1RGO_A 2CQE_A 2FC6_A 2D9M_A 2E5S_A 2RHK_C 2D9N_A 3D2S_A 3D2Q_C ....
Probab=95.61 E-value=0.0028 Score=43.38 Aligned_cols=23 Identities=43% Similarity=0.703 Sum_probs=16.9
Q ss_pred cccccCCCC---CCCCCCc-cccCCCc
Q 004887 343 YRTKLCKDG---TSCMRRV-CFFAHAL 365 (725)
Q Consensus 343 ykt~~C~~~---~~C~~~~-C~faH~~ 365 (725)
|||.+|+.| +.|+++. |.|+|++
T Consensus 1 ~k~~~C~~f~~~g~C~~G~~C~f~H~~ 27 (27)
T PF00642_consen 1 YKTKLCRFFMRTGTCPFGDKCRFAHGE 27 (27)
T ss_dssp TTSSB-HHHHHTS--TTGGGSSSBSSG
T ss_pred CccccChhhccCCccCCCCCcCccCCC
Confidence 799999975 6899975 9999974
No 128
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=94.56 E-value=0.039 Score=63.75 Aligned_cols=89 Identities=26% Similarity=0.450 Sum_probs=57.2
Q ss_pred cccccccccCCCCCCCCCCCCCCcc--cCCC-----CccCccCcCCCCCcCCCCCCCCCcccccCCccc----cccCCcc
Q 004887 274 KIRPCSRAYSHDWTECPFAHPGENA--RRRD-----PRKFHYSCMPCPDHRKGACSRGDMCEYAHGIFE----SWLHPAQ 342 (725)
Q Consensus 274 kv~~Csr~~~hd~~eCp~~H~~E~a--rrr~-----Pr~y~Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~E----~~~hP~~ 342 (725)
.+.+|.++.....-+|.|+|+.- + ..-. +.+..|.-..|..-.+ |..- .|.|.|+..- +...|..
T Consensus 543 ~l~~Cky~~~Ct~a~Ce~~HPta-a~~~~s~p~k~fa~~~~ks~p~Ck~~~k--Ctas-DC~~sH~~~~~pvq~t~ip~~ 618 (681)
T KOG3702|consen 543 ILTRCKYGPACTSAECEFAHPTA-AENAKSLPNKKFASKCLKSHPGCKFGKK--CTAS-DCNYSHAGRRIPVQPTRIPPP 618 (681)
T ss_pred eeccccCCCcCCchhhhhcCCcc-hhhhhccccccccccceecccccccccc--cccc-cCcccccCCCCCCccccCCCC
Confidence 35578888887888899999753 2 2222 2233444445554444 5554 6889996533 2223444
Q ss_pred cc----cccCCCCCCCCCCccccCCCcC
Q 004887 343 YR----TKLCKDGTSCMRRVCFFAHALD 366 (725)
Q Consensus 343 yk----t~~C~~~~~C~~~~C~faH~~~ 366 (725)
+. +.+|+++++|+...|.|.|-..
T Consensus 619 ~~~~ti~~~CrY~pnCrnm~C~F~HPk~ 646 (681)
T KOG3702|consen 619 FPGGTIRGLCRYRPNCRNMQCKFYHPKT 646 (681)
T ss_pred CCCCCccccceeccCcCCccccccCCcc
Confidence 44 6789999999999999999644
No 129
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=92.71 E-value=0.074 Score=33.40 Aligned_cols=17 Identities=41% Similarity=0.888 Sum_probs=14.4
Q ss_pred cCCCCCCCCCC-ccccCC
Q 004887 347 LCKDGTSCMRR-VCFFAH 363 (725)
Q Consensus 347 ~C~~~~~C~~~-~C~faH 363 (725)
+|++|.+|+++ .|.|+|
T Consensus 1 ~Ck~~~~C~~~~~C~f~H 18 (19)
T PF14608_consen 1 PCKFGPNCTNGDNCPFSH 18 (19)
T ss_pred CCcCcCCCCCCCcCccCC
Confidence 48888889987 799988
No 130
>smart00356 ZnF_C3H1 zinc finger.
Probab=92.49 E-value=0.087 Score=35.40 Aligned_cols=23 Identities=48% Similarity=0.746 Sum_probs=19.1
Q ss_pred cccccCCCC--CCCCCCc-cccCCCc
Q 004887 343 YRTKLCKDG--TSCMRRV-CFFAHAL 365 (725)
Q Consensus 343 ykt~~C~~~--~~C~~~~-C~faH~~ 365 (725)
+|+.+|++| +.|+++. |.|.|..
T Consensus 2 ~k~~~C~~~~~g~C~~g~~C~~~H~~ 27 (27)
T smart00356 2 YKTELCKFFKRGYCPYGDRCKFAHPL 27 (27)
T ss_pred CCCCcCcCccCCCCCCCCCcCCCCcC
Confidence 688899986 4799975 9999973
No 131
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=90.95 E-value=0.14 Score=51.65 Aligned_cols=65 Identities=22% Similarity=0.493 Sum_probs=46.3
Q ss_pred ccCCCCCCCCCCCCCCcccCCCCccCccCcCCCCCcCCCCCCCCCcccccCCccccccCCcccccccCCCC--CCCCCCc
Q 004887 281 AYSHDWTECPFAHPGENARRRDPRKFHYSCMPCPDHRKGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDG--TSCMRRV 358 (725)
Q Consensus 281 ~~~hd~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~--~~C~~~~ 358 (725)
+-+...-.|.|.|-. -.-++||.|-.|.|.+...|...|-... .|---|++| +.|+.+.
T Consensus 216 gicgkgaacrfvhep------------trkticpkflngrcnkaedcnlsheldp-------rripacryfllgkcnnpn 276 (377)
T KOG1492|consen 216 GICGKGAACRFVHEP------------TRKTICPKFLNGRCNKAEDCNLSHELDP-------RRIPACRYFLLGKCNNPN 276 (377)
T ss_pred CcccCCceeeeeccc------------cccccChHHhcCccCchhcCCcccccCc-------cccchhhhhhhccCCCCC
Confidence 334455568888832 2346999999999999999999986322 222358886 6888888
Q ss_pred cccCCC
Q 004887 359 CFFAHA 364 (725)
Q Consensus 359 C~faH~ 364 (725)
|.|.|-
T Consensus 277 cryvhi 282 (377)
T KOG1492|consen 277 CRYVHI 282 (377)
T ss_pred ceEEEE
Confidence 888774
No 132
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=90.39 E-value=0.24 Score=55.84 Aligned_cols=43 Identities=26% Similarity=0.135 Sum_probs=40.4
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHH
Q 004887 99 QHRTPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAA 143 (725)
Q Consensus 99 ~G~TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa 143 (725)
..-|+||+|+..|..++|.+||+. |+|+-.+ |..|.||..++.
T Consensus 429 ltsT~LH~aa~qg~~k~v~~~Lee-g~Dp~~k-d~~Grtpy~ls~ 471 (591)
T KOG2505|consen 429 LTSTFLHYAAAQGARKCVKYFLEE-GCDPSTK-DGAGRTPYSLSA 471 (591)
T ss_pred ccchHHHHHHhcchHHHHHHHHHh-cCCchhc-ccCCCCcccccc
Confidence 367999999999999999999999 8999999 999999999887
No 133
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=89.60 E-value=0.17 Score=54.98 Aligned_cols=53 Identities=25% Similarity=0.521 Sum_probs=38.1
Q ss_pred CccCcCCCCCcCCCCCCCCCcccccCCccccccCCcccccccCCCC---CCCCC-CccccCCCc
Q 004887 306 FHYSCMPCPDHRKGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDG---TSCMR-RVCFFAHAL 365 (725)
Q Consensus 306 y~Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~---~~C~~-~~C~faH~~ 365 (725)
-.++.+.|..|.+|.|..||.|.|.|.. ++-|.+.|..| +.|.+ ..|.|.|+.
T Consensus 73 ~~~~~~vcK~~l~glC~kgD~C~Flhe~-------~~~k~rec~ff~~~g~c~~~~~c~y~h~d 129 (325)
T KOG1040|consen 73 DSRGKVVCKHWLRGLCKKGDQCEFLHEY-------DLTKMRECKFFSLFGECTNGKDCPYLHGD 129 (325)
T ss_pred ccCCceeehhhhhhhhhccCcCcchhhh-------hhcccccccccccccccccccCCcccCCC
Confidence 3577789999999999999999999963 23444456553 45666 346666665
No 134
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=88.89 E-value=1.7 Score=44.84 Aligned_cols=96 Identities=19% Similarity=0.173 Sum_probs=67.8
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhcCC---CCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHCC-CCCCCc---CCCC
Q 004887 99 QHRTPLMVAAEYGSVDVVKLILSLTK---ADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFAG-ADSNLT---DAHG 171 (725)
Q Consensus 99 ~G~TPLh~Aa~~G~~eiVk~LLe~~G---adVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~G-ADin~~---D~~G 171 (725)
+-.++|-+|+..+..+++-+||.... .||-.. ..+.--+-++..... ....|++.+|.+| +++|.+ -+.|
T Consensus 178 dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~--~~~~ydieY~LS~h~-a~~kvL~~Fi~~Glv~vN~~F~~~NSG 254 (284)
T PF06128_consen 178 DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASM--EKELYDIEYLLSEHS-ASYKVLEYFINRGLVDVNKKFQKVNSG 254 (284)
T ss_pred HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhc--CcchhhHHHHHhhcC-CcHHHHHHHHhccccccchhhhccCCc
Confidence 45678889998899999999998621 222211 223233444443322 2378999999998 677754 5679
Q ss_pred CcHHHHHHhCCCCCCHHHHHHHHHHCCCCC
Q 004887 172 NRPFDVIVVHPNVPDSRVSLEDLLKNGGSV 201 (725)
Q Consensus 172 ~TPLhlA~~~g~~e~~~~ivelLL~~Gadv 201 (725)
.|-|+-|++. +..+++.+||++||-.
T Consensus 255 dtMLDNA~Ky----~~~emi~~Llk~GA~~ 280 (284)
T PF06128_consen 255 DTMLDNAMKY----KNSEMIAFLLKYGAIS 280 (284)
T ss_pred chHHHhHHhc----CcHHHHHHHHHcCccc
Confidence 9999999997 5566999999999854
No 135
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=88.87 E-value=0.21 Score=56.16 Aligned_cols=60 Identities=30% Similarity=0.414 Sum_probs=43.2
Q ss_pred CcCCCCCcCCC---CCCCCCcccccCCccccccC--CcccccccCCC---CCCCCCCc-ccc--CCCcCcccc
Q 004887 309 SCMPCPDHRKG---ACSRGDMCEYAHGIFESWLH--PAQYRTKLCKD---GTSCMRRV-CFF--AHALDELRP 370 (725)
Q Consensus 309 kt~~Cp~~~~g---~C~~Gd~C~yaH~~~E~~~h--P~~ykt~~C~~---~~~C~~~~-C~f--aH~~~elr~ 370 (725)
+..+||....| .|.+||+|.|.|.+.-.+-- |++- -.|.- ++.|+|++ |.| ||-..+-+.
T Consensus 75 ~n~LCPsli~g~~~~C~f~d~Crf~HDi~ayLatK~~Dig--~~Cp~f~s~G~Cp~G~~CRFl~aHld~~g~~ 145 (614)
T KOG2333|consen 75 QNRLCPSLIQGDISKCSFGDNCRFVHDIEAYLATKAPDIG--PSCPVFESLGFCPYGFKCRFLGAHLDIEGNN 145 (614)
T ss_pred hhccChHhhcCCCccCcccccccccccHHHHHhccCcccC--CccceeeccccCCccceeehhhcccCccccc
Confidence 56799998765 79999999999987554432 3332 24665 46899997 999 676666554
No 136
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=86.62 E-value=0.086 Score=53.78 Aligned_cols=61 Identities=26% Similarity=0.544 Sum_probs=44.5
Q ss_pred ccCcCCCCCcCCCCCCCCCcccccCCcccccc--C-------------------CcccccccCCCC-------C-----C
Q 004887 307 HYSCMPCPDHRKGACSRGDMCEYAHGIFESWL--H-------------------PAQYRTKLCKDG-------T-----S 353 (725)
Q Consensus 307 ~Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~E~~~--h-------------------P~~ykt~~C~~~-------~-----~ 353 (725)
.-+++.|-.|..+.|-+|+.|.|+|+..|-+- . |-+---+.|++| . .
T Consensus 82 dpK~~vcalF~~~~c~kg~~ckF~h~~ee~r~~eK~DLYsDvRd~~ed~pl~krP~intd~VCkffieA~e~GkYgw~W~ 161 (299)
T COG5252 82 DPKTVVCALFLNKTCAKGDACKFAHGKEEARKTEKPDLYSDVRDKEEDVPLGKRPWINTDRVCKFFIEAMESGKYGWGWT 161 (299)
T ss_pred CchhHHHHHhccCccccCchhhhhcchHHHhhhcccchhhhhhhhhccCCcccCCCCChhHHHHHHHHHHhcCCccceee
Confidence 45678999999999999999999999655332 1 222233457753 1 5
Q ss_pred CCCC--ccccCCCcCc
Q 004887 354 CMRR--VCFFAHALDE 367 (725)
Q Consensus 354 C~~~--~C~faH~~~e 367 (725)
||++ .|.|.|..-+
T Consensus 162 CPng~~~C~y~H~Lp~ 177 (299)
T COG5252 162 CPNGNMRCSYIHKLPD 177 (299)
T ss_pred CCCCCceeeeeeccCc
Confidence 9987 5999998665
No 137
>KOG1763 consensus Uncharacterized conserved protein, contains CCCH-type Zn-finger [General function prediction only]
Probab=85.74 E-value=0.15 Score=53.68 Aligned_cols=27 Identities=26% Similarity=0.822 Sum_probs=23.8
Q ss_pred cCcCCCCCcCCCCCCCCCcccccCCcc
Q 004887 308 YSCMPCPDHRKGACSRGDMCEYAHGIF 334 (725)
Q Consensus 308 Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~ 334 (725)
=++.+|-.|..|.|..|+.|.|+|+..
T Consensus 90 PKSvvCafFk~g~C~KG~kCKFsHdl~ 116 (343)
T KOG1763|consen 90 PKSVVCAFFKQGTCTKGDKCKFSHDLA 116 (343)
T ss_pred chHHHHHHHhccCCCCCCcccccchHH
Confidence 366899999999999999999999763
No 138
>PF14608 zf-CCCH_2: Zinc finger C-x8-C-x5-C-x3-H type
Probab=84.88 E-value=0.71 Score=29.00 Aligned_cols=19 Identities=37% Similarity=0.990 Sum_probs=15.3
Q ss_pred CCCCcCCCCCCCCCcccccCC
Q 004887 312 PCPDHRKGACSRGDMCEYAHG 332 (725)
Q Consensus 312 ~Cp~~~~g~C~~Gd~C~yaH~ 332 (725)
+|..+.. |++++.|.|.|.
T Consensus 1 ~Ck~~~~--C~~~~~C~f~HP 19 (19)
T PF14608_consen 1 PCKFGPN--CTNGDNCPFSHP 19 (19)
T ss_pred CCcCcCC--CCCCCcCccCCc
Confidence 4776655 999999999984
No 139
>KOG1040 consensus Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit) [RNA processing and modification]
Probab=83.80 E-value=0.97 Score=49.31 Aligned_cols=16 Identities=44% Similarity=0.980 Sum_probs=8.8
Q ss_pred CCCCCCCCcccccCCc
Q 004887 318 KGACSRGDMCEYAHGI 333 (725)
Q Consensus 318 ~g~C~~Gd~C~yaH~~ 333 (725)
.|-|.++..|.|-|+.
T Consensus 114 ~g~c~~~~~c~y~h~d 129 (325)
T KOG1040|consen 114 FGECTNGKDCPYLHGD 129 (325)
T ss_pred ccccccccCCcccCCC
Confidence 3445555566665553
No 140
>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]
Probab=75.42 E-value=1.6 Score=48.12 Aligned_cols=30 Identities=33% Similarity=0.512 Sum_probs=25.1
Q ss_pred cccCCcccccccCCCC--CCCCCC-ccccCCCc
Q 004887 336 SWLHPAQYRTKLCKDG--TSCMRR-VCFFAHAL 365 (725)
Q Consensus 336 ~~~hP~~ykt~~C~~~--~~C~~~-~C~faH~~ 365 (725)
+..||..-..++|++| +.|+.+ .|.|.||.
T Consensus 131 lfl~PTh~sMkpC~ffLeg~CRF~enCRfSHG~ 163 (486)
T KOG2185|consen 131 LFLTPTHESMKPCKFFLEGRCRFGENCRFSHGL 163 (486)
T ss_pred EeecCcchhhccchHhhccccccCcccccccCc
Confidence 4457999999999997 689986 49999994
No 141
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=75.07 E-value=2.6 Score=45.09 Aligned_cols=52 Identities=25% Similarity=0.437 Sum_probs=44.2
Q ss_pred ccCcCCCCCcCCCCCCCCCcccccCCccccccCCcccc--cccCCCC---CCCCCC-ccccCCCc
Q 004887 307 HYSCMPCPDHRKGACSRGDMCEYAHGIFESWLHPAQYR--TKLCKDG---TSCMRR-VCFFAHAL 365 (725)
Q Consensus 307 ~Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~E~~~hP~~yk--t~~C~~~---~~C~~~-~C~faH~~ 365 (725)
.+..+.|+.|-.|.|+.+..|.|.|+ ..+.+ +-.|+.| +.|..+ .|.+.|..
T Consensus 101 ~~s~V~c~~~~~g~c~s~~~c~~lh~-------~d~~~s~~~~c~~Fs~~G~cs~g~~c~~~h~d 158 (285)
T COG5084 101 LSSSVVCKFFLRGLCKSGFSCEFLHE-------YDLRSSQGPPCRSFSLKGSCSSGPSCGYSHID 158 (285)
T ss_pred ccCCcccchhccccCcCCCccccccC-------CCcccccCCCcccccccceeccCCCCCccccC
Confidence 68888999999999999999999998 55556 6779987 579985 59999984
No 142
>KOG2494 consensus C3H1-type Zn-finger protein [Transcription]
Probab=72.65 E-value=2.1 Score=46.16 Aligned_cols=67 Identities=34% Similarity=0.602 Sum_probs=45.2
Q ss_pred cccccccchhhhhccccccccccccCCCCCCCCCCCCCCcccCCCCccCccCcCCCCCcCCCCCCCCCcccccCCccc
Q 004887 258 IKDSIYASDEFRMYSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYSCMPCPDHRKGACSRGDMCEYAHGIFE 335 (725)
Q Consensus 258 i~~~iy~~Defrm~~fkv~~Csr~~~hd~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~~~g~C~~Gd~C~yaH~~~E 335 (725)
++..-+.+||. --+|.-..|+|+. .+|-|+|+.+ ++..-+-+..-|=++.+|.|.+. +|.|.|+..+
T Consensus 29 ~kd~~wl~~eV-CReF~rn~C~R~d----~~CkfaHP~~-----~~~V~~g~v~aC~Ds~kgrCsR~-nCkylHpp~h 95 (331)
T KOG2494|consen 29 VKDTKWLTLEV-CREFLRNTCSRGD----RECKFAHPPK-----NCQVSNGRVIACFDSQKGRCSRE-NCKYLHPPQH 95 (331)
T ss_pred ccccchhHHHH-HHHHHhccccCCC----ccccccCCCC-----CCCccCCeEEEEeccccCccCcc-cceecCCChh
Confidence 34444444543 2346667788775 4699999864 33444455578999999999985 6999999533
No 143
>COG5152 Uncharacterized conserved protein, contains RING and CCCH-type Zn-fingers [General function prediction only]
Probab=71.86 E-value=1.8 Score=43.40 Aligned_cols=30 Identities=27% Similarity=0.536 Sum_probs=26.6
Q ss_pred cCccCcCCCCCcC-CCCCCCCCcccccCCcc
Q 004887 305 KFHYSCMPCPDHR-KGACSRGDMCEYAHGIF 334 (725)
Q Consensus 305 ~y~Ykt~~Cp~~~-~g~C~~Gd~C~yaH~~~ 334 (725)
...|.+..|..|+ .|.|.|||.|.|-|.+.
T Consensus 136 viD~qpdVCKdyk~TGYCGYGDsCKflH~R~ 166 (259)
T COG5152 136 VIDTQPDVCKDYKETGYCGYGDSCKFLHDRS 166 (259)
T ss_pred eeecCcccccchhhcccccCCchhhhhhhhh
Confidence 3678889999996 89999999999999885
No 144
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=70.06 E-value=8 Score=32.90 Aligned_cols=47 Identities=15% Similarity=0.227 Sum_probs=35.2
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHHC
Q 004887 102 TPLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLFA 160 (725)
Q Consensus 102 TPLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~~ 160 (725)
.-|..|+..|+.|+++.+++. + .++ ...|..|+..-+ .+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~-~-~~~-------~~~l~~AI~~H~---n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKK-N-KPD-------NDCLEYAIKSHN---NEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHH-h-ccH-------HHHHHHHHHHhh---HHHHHHHHHh
Confidence 456888888888888888876 2 222 346888888877 8888888875
No 145
>KOG3702 consensus Nuclear polyadenylated RNA binding protein [RNA processing and modification]
Probab=69.99 E-value=6.5 Score=46.16 Aligned_cols=75 Identities=28% Similarity=0.576 Sum_probs=46.5
Q ss_pred cccccCCCCCCCCCCCCCCcccCCCCccCccCcCCCCCc---CCCCCCCCCcccccCCccccccCCcccccccCCCCCCC
Q 004887 278 CSRAYSHDWTECPFAHPGENARRRDPRKFHYSCMPCPDH---RKGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDGTSC 354 (725)
Q Consensus 278 Csr~~~hd~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~---~~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~~~C 354 (725)
|.-+-......|.|.|.+ ++.|- .|+...|+.- ..+.|+|+-+|.= .....+|| ..|+...+|
T Consensus 588 Ck~~~kCtasDC~~sH~~----~~~pv--q~t~ip~~~~~~ti~~~CrY~pnCrn---m~C~F~HP-----k~cRf~~~c 653 (681)
T KOG3702|consen 588 CKFGKKCTASDCNYSHAG----RRIPV--QPTRIPPPFPGGTIRGLCRYRPNCRN---MQCKFYHP-----KTCRFNTNC 653 (681)
T ss_pred cccccccccccCcccccC----CCCCC--ccccCCCCCCCCCccccceeccCcCC---ccccccCC-----ccccccccC
Confidence 444444455668888843 34443 3666666543 2456777666643 23334566 479999999
Q ss_pred C-CCccccCCCcC
Q 004887 355 M-RRVCFFAHALD 366 (725)
Q Consensus 355 ~-~~~C~faH~~~ 366 (725)
+ +..|.|+|-.-
T Consensus 654 ~~~~sc~fYh~r~ 666 (681)
T KOG3702|consen 654 PNNPSCTFYHERP 666 (681)
T ss_pred CCCcccccccCCc
Confidence 9 56799999743
No 146
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=67.01 E-value=4.2 Score=45.81 Aligned_cols=68 Identities=28% Similarity=0.527 Sum_probs=46.5
Q ss_pred CCCCCCCCCCCCcccCCCCccCccCcCCCCCcCCC-CCCCCCcccccCCccccccCCcccccccCCCC---CCCCCCccc
Q 004887 285 DWTECPFAHPGENARRRDPRKFHYSCMPCPDHRKG-ACSRGDMCEYAHGIFESWLHPAQYRTKLCKDG---TSCMRRVCF 360 (725)
Q Consensus 285 d~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~~~g-~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~---~~C~~~~C~ 360 (725)
...+|+|.|+ |.+ +.+ -+-|-+|..+ .|++ .|.|.|..+.+. .+.++|.++ ..|-...|-
T Consensus 16 k~d~c~~rh~-E~a-l~n-------~t~C~~w~~~~~C~k--~C~YRHSe~~~k-----r~e~~CYwe~~p~gC~k~~Cg 79 (667)
T KOG4791|consen 16 KGDSCPFRHC-EAA-LGN-------ETVCTLWQEGRCCRK--VCRYRHSEIDKK-----RSEIPCYWENQPTGCQKLNCG 79 (667)
T ss_pred ccCcCcchhh-HHH-hcC-------cchhhhhhhcCcccc--cccchhhHHhhh-----cCcccceeecCCCccCCCccc
Confidence 3456999995 433 111 2467777644 4665 899999976655 456789876 369999999
Q ss_pred cCCCcCcc
Q 004887 361 FAHALDEL 368 (725)
Q Consensus 361 faH~~~el 368 (725)
|-|.---|
T Consensus 80 fRH~~pPL 87 (667)
T KOG4791|consen 80 FRHNRPPL 87 (667)
T ss_pred cccCCCch
Confidence 99965333
No 147
>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]
Probab=61.70 E-value=4.6 Score=44.75 Aligned_cols=54 Identities=28% Similarity=0.563 Sum_probs=35.0
Q ss_pred cccccccCCCCCCCCCCCCCC------cccCCCCccCccCc----CCCCCcCCCCCCCCCcccccCCc
Q 004887 276 RPCSRAYSHDWTECPFAHPGE------NARRRDPRKFHYSC----MPCPDHRKGACSRGDMCEYAHGI 333 (725)
Q Consensus 276 ~~Csr~~~hd~~eCp~~H~~E------~arrr~Pr~y~Ykt----~~Cp~~~~g~C~~Gd~C~yaH~~ 333 (725)
..|+-.|.+.|- -+||++- .++-|- -|.|-| ++|+.|..|.|+.+.+|.|.||.
T Consensus 100 sKcsaph~ss~g--l~yHna~I~g~E~sarvRV--lfl~PTh~sMkpC~ffLeg~CRF~enCRfSHG~ 163 (486)
T KOG2185|consen 100 SKCSAPHTSSRG--LYYHNARIIGFEGSARVRV--LFLTPTHESMKPCKFFLEGRCRFGENCRFSHGL 163 (486)
T ss_pred CcccccccCCcc--ceecceeEEeeccccceEE--EeecCcchhhccchHhhccccccCcccccccCc
Confidence 347766666665 3455421 112221 133333 59999999999999999999985
No 148
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=60.56 E-value=14 Score=38.29 Aligned_cols=50 Identities=24% Similarity=0.191 Sum_probs=42.7
Q ss_pred CCHHHHHHHHhcCCCCccccc--CCCCchHHHHHHhCCCCCHHHHHHHHHHCCCC
Q 004887 111 GSVDVVKLILSLTKADVNLTC--GLDKSTALHCAASGGSVNAVDVVKLLLFAGAD 163 (725)
Q Consensus 111 G~~eiVk~LLe~~GadVN~~~--d~~G~TpLH~Aa~~G~~~~~eiVklLL~~GAD 163 (725)
.+..|+++.|+++-++||.+- -..|.|-|--|+..++ .+++.+||++||-
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~---~emi~~Llk~GA~ 279 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKN---SEMIAFLLKYGAI 279 (284)
T ss_pred CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCc---HHHHHHHHHcCcc
Confidence 456789999998778888642 3589999999999999 9999999999984
No 149
>KOG1492 consensus C3H1-type Zn-finger protein [General function prediction only]
Probab=59.98 E-value=4.8 Score=40.95 Aligned_cols=52 Identities=29% Similarity=0.664 Sum_probs=40.3
Q ss_pred CCCCCcC-CCCCCCCCcccccCCccccccCCcccccccCCCC--CCCCCC-ccccCCCcCccccc
Q 004887 311 MPCPDHR-KGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDG--TSCMRR-VCFFAHALDELRPL 371 (725)
Q Consensus 311 ~~Cp~~~-~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~--~~C~~~-~C~faH~~~elr~~ 371 (725)
..|..+. .|.|.+|..|.|-|- | .|...|..| +.|+.. .|-..|..+-.|.+
T Consensus 207 vycryynangicgkgaacrfvhe-------p--trkticpkflngrcnkaedcnlsheldprrip 262 (377)
T KOG1492|consen 207 VYCRYYNANGICGKGAACRFVHE-------P--TRKTICPKFLNGRCNKAEDCNLSHELDPRRIP 262 (377)
T ss_pred eEEEEecCCCcccCCceeeeecc-------c--cccccChHHhcCccCchhcCCcccccCccccc
Confidence 4677775 789999999999987 3 234468876 679975 59999998887765
No 150
>KOG1813 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=57.08 E-value=4.5 Score=43.17 Aligned_cols=33 Identities=27% Similarity=0.634 Sum_probs=28.1
Q ss_pred ccCccCcCCCCCcC-CCCCCCCCcccccCCcccc
Q 004887 304 RKFHYSCMPCPDHR-KGACSRGDMCEYAHGIFES 336 (725)
Q Consensus 304 r~y~Ykt~~Cp~~~-~g~C~~Gd~C~yaH~~~E~ 336 (725)
-.+.|.+.+|.++. +|.|.+||.|.|-|.+...
T Consensus 180 ~~~d~qpDicKdykeTgycg~gdSckFlh~r~Dy 213 (313)
T KOG1813|consen 180 ERIDYQPDICKDYKETGYCGYGDSCKFLHDRSDY 213 (313)
T ss_pred ceeecCchhhhhhHhhCcccccchhhhhhhhhhc
Confidence 34689999999996 8999999999999987643
No 151
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=49.77 E-value=18 Score=30.71 Aligned_cols=47 Identities=17% Similarity=0.312 Sum_probs=37.4
Q ss_pred hHHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHHC
Q 004887 137 TALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLKN 197 (725)
Q Consensus 137 TpLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~~ 197 (725)
.-|.+|+.+|+ .||++.+++.+ .++ ...+..|+.. -..++++.|++.
T Consensus 8 ~tl~~Ai~GGN---~eII~~c~~~~-~~~------~~~l~~AI~~----H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGN---FEIINICLKKN-KPD------NDCLEYAIKS----HNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCC---HHHHHHHHHHh-ccH------HHHHHHHHHH----hhHHHHHHHHHh
Confidence 46899999999 99999999765 222 4579999987 445599999886
No 152
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only]
Probab=41.09 E-value=14 Score=42.14 Aligned_cols=48 Identities=27% Similarity=0.439 Sum_probs=30.4
Q ss_pred CCCCCCCCCCcccCCCCccCccCcCCCCCcC-CCCCCCCCcccc--cCCccccc
Q 004887 287 TECPFAHPGENARRRDPRKFHYSCMPCPDHR-KGACSRGDMCEY--AHGIFESW 337 (725)
Q Consensus 287 ~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~~-~g~C~~Gd~C~y--aH~~~E~~ 337 (725)
..|-|.|+.+-.....+... -..||.|. .|.|++|-+|.| +|...|=.
T Consensus 94 d~Crf~HDi~ayLatK~~Di---g~~Cp~f~s~G~Cp~G~~CRFl~aHld~~g~ 144 (614)
T KOG2333|consen 94 DNCRFVHDIEAYLATKAPDI---GPSCPVFESLGFCPYGFKCRFLGAHLDIEGN 144 (614)
T ss_pred ccccccccHHHHHhccCccc---CCccceeeccccCCccceeehhhcccCcccc
Confidence 34777777652222222222 25899996 789999999999 46655533
No 153
>COG5084 YTH1 Cleavage and polyadenylation specificity factor (CPSF) Clipper subunit and related makorin family Zn-finger proteins [General function prediction only]
Probab=39.37 E-value=1.9e+02 Score=31.32 Aligned_cols=74 Identities=32% Similarity=0.653 Sum_probs=48.5
Q ss_pred ccccccccccCCCCCCCCCCCCCCcccCCCCccCccCcCCCCCc-CCCCCCCCCcccccCCccccccCCcccccccCCCC
Q 004887 273 FKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYSCMPCPDH-RKGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDG 351 (725)
Q Consensus 273 fkv~~Csr~~~hd~~eCp~~H~~E~arrr~Pr~y~Ykt~~Cp~~-~~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~ 351 (725)
|+...|..+. .|.|.|.. ++++- ....|..| ..|.|..|-.|.|.|.. |... -..|..+
T Consensus 110 ~~~g~c~s~~-----~c~~lh~~------d~~~s--~~~~c~~Fs~~G~cs~g~~c~~~h~d------p~~~-~~~~~~~ 169 (285)
T COG5084 110 FLRGLCKSGF-----SCEFLHEY------DLRSS--QGPPCRSFSLKGSCSSGPSCGYSHID------PDSF-AGNCDQY 169 (285)
T ss_pred hccccCcCCC-----ccccccCC------Ccccc--cCCCcccccccceeccCCCCCccccC------cccc-ccccccc
Confidence 4444455444 48888842 22222 45678888 68999999999999985 4322 2235544
Q ss_pred -----CCCCCCc-cccCCCcC
Q 004887 352 -----TSCMRRV-CFFAHALD 366 (725)
Q Consensus 352 -----~~C~~~~-C~faH~~~ 366 (725)
.-|+++. |.|-|+..
T Consensus 170 ~~~~~~f~p~g~~c~~~H~~~ 190 (285)
T COG5084 170 SGATYGFCPLGASCKFSHTLK 190 (285)
T ss_pred CcccccccCCCCccccccccc
Confidence 3599875 99999865
No 154
>KOG4791 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.62 E-value=9.9 Score=42.98 Aligned_cols=50 Identities=24% Similarity=0.465 Sum_probs=30.8
Q ss_pred CCCcCCCCCCCCCcccccCCccccccCCcccccccCCCCC--CCCCCccccCCCcCcc
Q 004887 313 CPDHRKGACSRGDMCEYAHGIFESWLHPAQYRTKLCKDGT--SCMRRVCFFAHALDEL 368 (725)
Q Consensus 313 Cp~~~~g~C~~Gd~C~yaH~~~E~~~hP~~ykt~~C~~~~--~C~~~~C~faH~~~el 368 (725)
|-.|....|+++|.|.|.|...-+.. -.-|.+|- .|-+.+|.|-|+...+
T Consensus 6 cyff~ys~cKk~d~c~~rh~E~al~n------~t~C~~w~~~~~C~k~C~YRHSe~~~ 57 (667)
T KOG4791|consen 6 CYFFFYSTCKKGDSCPFRHCEAALGN------ETVCTLWQEGRCCRKVCRYRHSEIDK 57 (667)
T ss_pred chhhhhhhhhccCcCcchhhHHHhcC------cchhhhhhhcCcccccccchhhHHhh
Confidence 44455556999999999997543322 12366652 2333477777776555
No 155
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=33.98 E-value=67 Score=32.45 Aligned_cols=46 Identities=22% Similarity=0.222 Sum_probs=36.7
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHCCCCCCCcCCCCCcHHHHHHhCCCCCCHHHHHHHHHH
Q 004887 138 ALHCAASGGSVNAVDVVKLLLFAGADSNLTDAHGNRPFDVIVVHPNVPDSRVSLEDLLK 196 (725)
Q Consensus 138 pLH~Aa~~G~~~~~eiVklLL~~GADin~~D~~G~TPLhlA~~~g~~e~~~~ivelLL~ 196 (725)
-|..|+..|- ...|.-.|++|.+++. +.|..|+.. +.++|+.+++.
T Consensus 146 hl~~a~~kgl---l~F~letlkygg~~~~------~vls~Av~y----nhRkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGL---LPFVLETLKYGGNVDI------IVLSQAVKY----NHRKILDYFIR 191 (192)
T ss_pred HHHHHHHCCC---HHHHHHHHHcCCcccH------HHHHHHHHh----hHHHHHHHhhc
Confidence 4667888888 8888888888887764 788888886 77778888774
No 156
>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=31.50 E-value=74 Score=32.15 Aligned_cols=46 Identities=20% Similarity=0.182 Sum_probs=39.9
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCcccccCCCCchHHHHHHhCCCCCHHHHHHHHHH
Q 004887 103 PLMVAAEYGSVDVVKLILSLTKADVNLTCGLDKSTALHCAASGGSVNAVDVVKLLLF 159 (725)
Q Consensus 103 PLh~Aa~~G~~eiVk~LLe~~GadVN~~~d~~G~TpLH~Aa~~G~~~~~eiVklLL~ 159 (725)
-|..|+..|-...|...|++ |-+++. ++|-.|+..++ ..|+.+++.
T Consensus 146 hl~~a~~kgll~F~letlky-gg~~~~-------~vls~Av~ynh---RkIL~yfi~ 191 (192)
T PF03158_consen 146 HLEKAAAKGLLPFVLETLKY-GGNVDI-------IVLSQAVKYNH---RKILDYFIR 191 (192)
T ss_pred HHHHHHHCCCHHHHHHHHHc-CCcccH-------HHHHHHHHhhH---HHHHHHhhc
Confidence 36789999999999999999 777664 69999999999 999998874
No 157
>KOG0153 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=30.48 E-value=27 Score=38.33 Aligned_cols=26 Identities=35% Similarity=0.621 Sum_probs=22.1
Q ss_pred cCcCCCCCcCCCCCCCCCcccccCCc
Q 004887 308 YSCMPCPDHRKGACSRGDMCEYAHGI 333 (725)
Q Consensus 308 Ykt~~Cp~~~~g~C~~Gd~C~yaH~~ 333 (725)
-.+.+|..|-+|.|++|+.|.|.|-.
T Consensus 159 n~p~Icsf~v~geckRG~ec~yrhEk 184 (377)
T KOG0153|consen 159 NRPHICSFFVKGECKRGAECPYRHEK 184 (377)
T ss_pred CCCccccceeeccccccccccccccC
Confidence 44568999999999999999999864
No 158
>PF10650 zf-C3H1: Putative zinc-finger domain; InterPro: IPR019607 This domain is conserved in fungi and might be a zinc-finger domain as it contains three conserved Cs and an H in the C-x8-C-x5-C-x3-H conformation typical of a zinc-finger.
Probab=27.85 E-value=35 Score=22.71 Aligned_cols=11 Identities=36% Similarity=0.745 Sum_probs=6.8
Q ss_pred CCCCCccccCC
Q 004887 353 SCMRRVCFFAH 363 (725)
Q Consensus 353 ~C~~~~C~faH 363 (725)
.|+...|.|-|
T Consensus 11 ~Cnd~~C~~QH 21 (23)
T PF10650_consen 11 VCNDPDCEFQH 21 (23)
T ss_pred eeCCCCCCccc
Confidence 56666666665
No 159
>KOG1039 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=27.77 E-value=24 Score=39.03 Aligned_cols=24 Identities=33% Similarity=0.758 Sum_probs=22.3
Q ss_pred CCCCCcCCCCCCCCCcccccCCcc
Q 004887 311 MPCPDHRKGACSRGDMCEYAHGIF 334 (725)
Q Consensus 311 ~~Cp~~~~g~C~~Gd~C~yaH~~~ 334 (725)
++|..+.+|.|++|+.|.|.|...
T Consensus 9 tic~~~~~g~c~~g~~cr~~h~~~ 32 (344)
T KOG1039|consen 9 TICKYYQKGNCKFGDLCRLSHSLP 32 (344)
T ss_pred hhhhhcccccccccceeeeeccCc
Confidence 899999999999999999999865
No 160
>COG5252 Uncharacterized conserved protein, contains CCCH-type Zn-finger protein [General function prediction only]
Probab=20.97 E-value=22 Score=36.91 Aligned_cols=29 Identities=31% Similarity=0.520 Sum_probs=23.9
Q ss_pred cccccCCCC--CCCCCCc-cccCCCcCccccc
Q 004887 343 YRTKLCKDG--TSCMRRV-CFFAHALDELRPL 371 (725)
Q Consensus 343 ykt~~C~~~--~~C~~~~-C~faH~~~elr~~ 371 (725)
-||..|..| ..|..+. |-|+|+.+|.|-.
T Consensus 83 pK~~vcalF~~~~c~kg~~ckF~h~~ee~r~~ 114 (299)
T COG5252 83 PKTVVCALFLNKTCAKGDACKFAHGKEEARKT 114 (299)
T ss_pred chhHHHHHhccCccccCchhhhhcchHHHhhh
Confidence 588889887 4798765 9999999998864
Done!