BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004891
(725 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/708 (55%), Positives = 513/708 (72%), Gaps = 6/708 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP M CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
ARI+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+
Sbjct: 426 NTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKK 485
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 541
NCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+L DL G+G
Sbjct: 486 TPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFG 545
Query: 542 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 601
VA AT+ +F + F +R+++S ++ L+ + R G+A KG Y Y+ K KPDP + IE
Sbjct: 546 VAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIE 605
Query: 602 ECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 661
+ R +S + K+ +++EK+I+EM FPVVNE+CRV EGI V+A+DLD A ++GM F
Sbjct: 606 KARSISGVKLDPKLA-NLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGF 664
Query: 662 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGI 709
P YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP FL ER +KG+
Sbjct: 665 PPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGV 712
>pdb|3ZW8|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW8|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) In Apo Form
pdb|3ZW9|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZW9|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
(2s,3s)-3-hydroxy-2- Methylbutanoyl-coa
pdb|3ZWA|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWA|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-hexanoyl-coa
pdb|3ZWC|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
pdb|3ZWC|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
3s-hydroxy-decanoyl-coa
Length = 742
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 359/719 (49%), Gaps = 50/719 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP+ +GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXX 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M+
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 485 XXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 543
NC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 550
Query: 544 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 591
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 610
Query: 592 PDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 651
PDP + + + R + +I +++++EI+E L+ ++NE+ R+LEEG+ R +
Sbjct: 611 PDPWLSTFLSQYREVHHIEQR-----TISKEEILERCLYSLINEAFRILEEGMAARPEHI 665
Query: 652 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 708
D + G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 666 DVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG 724
>pdb|2X58|A Chain A, The Crystal Structure Of Mfe1 Liganded With Coa
pdb|2X58|B Chain B, The Crystal Structure Of Mfe1 Liganded With Coa
Length = 727
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 359/719 (49%), Gaps = 50/719 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 16 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 72
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP+ +GCH RIA K ++GLP
Sbjct: 73 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 127
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 128 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 187
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 188 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 237
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 238 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 297
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 298 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 356
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 357 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 415
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXX 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M+
Sbjct: 416 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 475
Query: 485 XXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 543
NC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 476 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 535
Query: 544 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 591
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 536 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 595
Query: 592 PDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 651
PDP + + + R + +I +++++EI+E L+ ++NE+ R+LEEG+ R +
Sbjct: 596 PDPWLSTFLSQYREVHHIEQR-----TISKEEILERCLYSLINEAFRILEEGMAARPEHI 650
Query: 652 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 708
D + G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 651 DVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG 709
>pdb|3ZWB|A Chain A, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
pdb|3ZWB|B Chain B, Crystal Structure Of Rat Peroxisomal Multifunctional
Enzyme Type 1 (rpmfe1) Complexed With
2trans-hexenoyl-coa
Length = 742
Score = 324 bits (831), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 223/719 (31%), Positives = 358/719 (49%), Gaps = 50/719 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 31 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 87
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP+ +GCH RIA K ++GLP
Sbjct: 88 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 142
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 143 AVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 202
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 203 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 312
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 313 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 371
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 372 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 430
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXX 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M+
Sbjct: 431 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490
Query: 485 XXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 543
NC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 550
Query: 544 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 591
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 551 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 610
Query: 592 PDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 651
PDP + + + R + +I +++++EI+E L+ ++NE+ R+LEEG+ R +
Sbjct: 611 PDPWLSTFLSQYREVHHIEQR-----TISKEEILERCLYSLINEAFRILEEGMAARPEHI 665
Query: 652 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKG 708
D + G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 666 DVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQG 724
>pdb|1WDK|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|A Chain A, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|B Chain B, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 715
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 203/678 (29%), Positives = 327/678 (48%), Gaps = 38/678 (5%)
Query: 49 VKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-DVSVELVVNLIEDCKKPIXXXXXX 107
VK ++++ F G DI F + D L+ ++ + + ED P
Sbjct: 53 VKGVIVSSGKDVFIVGADITEFVENFKLPDAELIAGNLEANKIFSDFEDLNVPTVAAING 112
Query: 108 XXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167
+ R+ A ++GLPE+ LG+ PGFGGT RLPRL+G+ A+E + K
Sbjct: 113 IALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGK 172
Query: 168 SITSEEGWKLGLIDAVVTSE-------ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSL 220
+E+ K+ +DAVVT++ +L+K + LD A+R+P + L KL ++
Sbjct: 173 ENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKL----KLNAI 228
Query: 221 SEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 280
+ A + PN P + I++ G + EA F +L S
Sbjct: 229 EQMMAFETAKGFVAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASN 288
Query: 281 GLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVN 340
L+ +F + K V D K V++ AV+G G+MG GIA +++K++N
Sbjct: 289 CLIGLFLNDQELKKKAKVYDKIAKD--VKQAAVLGAGIMGGGIAYQSASKGTPILMKDIN 346
Query: 341 SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVP 400
+ +G+ + G V +G++T K L ++ L Y +F +VD+V+EAV+E+
Sbjct: 347 EHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPK 406
Query: 401 LKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVR 460
+KQ + +E+E ILA+NTSTI ++++ + + +G HFF+P H+MPL+E++R
Sbjct: 407 VKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIR 466
Query: 461 TERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDS 520
E++S + + +C GF VNR FPY LVS GVD RID
Sbjct: 467 GEKSSDLAVATTVAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDK 526
Query: 521 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQSPLVDLLLKSGRNGKANG 578
+ FG P+GP L+D+ G + FPDR + +D L ++ R G+ NG
Sbjct: 527 VMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNG 586
Query: 579 KGLYTYEKGSKPKP----DPSVL----PIIEECRRLSNIMPGGKVPISVTEKEIVEMILF 630
KG Y YE K K D SVL PI+ E R VT+++I+ ++
Sbjct: 587 KGFYAYEADKKGKQKKLVDSSVLEVLKPIVYEQR-------------DVTDEDIINWMMI 633
Query: 631 PVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQL 690
P+ E+ R LE+GIV A++ D V G+ FP +RGG + + D++G ++++L
Sbjct: 634 PLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQYAEL 693
Query: 691 YGNFFKPSRFLEERATKG 708
G + P+ L E A G
Sbjct: 694 -GALYHPTAKLREMAKNG 710
>pdb|1ZCJ|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase
Length = 463
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 219/448 (48%), Gaps = 25/448 (5%)
Query: 279 SRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKVAVIGGGLMGSGIATAHILNNIYVV 335
++ L + FFA+++ +K + K + V V V+G G MG GIA + I VV
Sbjct: 5 AKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVV 64
Query: 336 LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAV 395
E + + L K I + +R Q+ +A L+ E VD+V+EAV
Sbjct: 65 AVESDPKQLDAAKKIITFTLEKEASRAH--QNGQASAKPKLRFSSSTKELSTVDLVVEAV 122
Query: 396 IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPL 455
E + LK+K+F+EL C P L TNTS ++++ + T +IG HFFSPAHVM L
Sbjct: 123 FEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRL 182
Query: 456 LEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDV 515
LE++ + +S I +M+ NC GF NR PY L+ G
Sbjct: 183 LEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEEGSKP 242
Query: 516 FRIDSAIRSFGLPIGPFQLLDLAGYGVA-------AATSKEFDKAFPDR----SFQSPLV 564
+D + FG +GPF++ DLAG V T P R S SPL
Sbjct: 243 EDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLG 302
Query: 565 DLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLPIIEECRRLSNIMPGGKVPISVTEK 622
D+L ++GR G+ GKG Y Y+K G KPDP + + + R + +I +++++
Sbjct: 303 DMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIE-----QRTISKE 357
Query: 623 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT 682
EI+E L+ ++NE+ R+LEEG+ R +D + G +P ++GG +F+A +VG V
Sbjct: 358 EILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLE 417
Query: 683 SLKKWSQLYGNF--FKPSRFLEERATKG 708
L+K+ + + +PS +L +G
Sbjct: 418 KLQKYYRQNPDIPQLEPSDYLRRLVAQG 445
>pdb|3K6J|A Chain A, Crystal Structure Of The Dehydrogenase Part Of
Multifuctional Enzyme 1 From C.Elegans
Length = 460
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 185/385 (48%), Gaps = 16/385 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V VA+IGGG MG +A L I L N + + ++ + A + +
Sbjct: 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIE 113
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
K N LK+ D+ + + D+++E+VIE + LK+++F+ LE C CI TNTS++D
Sbjct: 114 KINANLKITS---DFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLD 170
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXX 487
LN + ++G HFF+PA+V+ L+EI+ TS+Q I
Sbjct: 171 LNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVG 230
Query: 488 NCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAAT 546
NC F NR Y QS +L+ G +ID I +FG +GP + D+ G+ V
Sbjct: 231 NCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFDVMEKL 290
Query: 547 SKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRL 606
KE + P+ P+ + + R G+ KG Y Y+ ++ K + + + I RR+
Sbjct: 291 KKE-NGLEPN-----PIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEMEQI--IRRV 342
Query: 607 SNIMPGGKVPIS-VTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 665
S K I + +++++ +L+P VNE R +EEG++ S +D +LG +P +
Sbjct: 343 S---QNAKSNIQIINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHS 399
Query: 666 GGIVFWADAVGANYVYTSLKKWSQL 690
GG + + G + + L WS L
Sbjct: 400 GGPMRFGKTEGLDKIANMLVHWSSL 424
>pdb|3MOG|A Chain A, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|B Chain B, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
pdb|3MOG|C Chain C, Crystal Structure Of 3-Hydroxybutyryl-Coa Dehydrogenase
From Escherichia Coli K12 Substr. Mg1655
Length = 483
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 150/281 (53%), Gaps = 4/281 (1%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ VAVIG G MG+GIA + V+L ++++E L + I I A + VTRGKLT +
Sbjct: 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAE 64
Query: 368 KANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427
LK L V D D+VIEA E + +K+ +F++L + CPP +L TNTS+I
Sbjct: 65 TCERTLKRLIPVTDIHALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS 124
Query: 428 LNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXX 487
+ + + + +R+ G HFF+PA VM L+E+V T+A+V+ L
Sbjct: 125 ITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCH 184
Query: 488 NCTGFAVNRAFFP-YSQSARLLVSLGVDVFRIDSAIRS-FGLPIGPFQLLDLAGYGVA-A 544
+ GF VNR P YS++ R L ID+A+R G P+GP +L DL G V A
Sbjct: 185 STPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVNFA 244
Query: 545 ATSKEFDKAFPDRSFQSPLVDL-LLKSGRNGKANGKGLYTY 584
T F+ + +R F LV L+ GR GK +G G+Y +
Sbjct: 245 VTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDW 285
>pdb|3HAD|A Chain A, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
pdb|3HAD|B Chain B, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
Length = 308
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKRAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1F0Y|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With
Acetoacetyl-Coa And Nad+
pdb|1F0Y|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With
Acetoacetyl-Coa And Nad+
Length = 302
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|3HDH|A Chain A, Pig Heart Short Chain L-3-Hydroxyacyl Coa Dehydrogenase
Revisited: Sequence Analysis And Crystal Structure
Determination
pdb|3HDH|B Chain B, Pig Heart Short Chain L-3-Hydroxyacyl Coa Dehydrogenase
Revisited: Sequence Analysis And Crystal Structure
Determination
pdb|3HDH|C Chain C, Pig Heart Short Chain L-3-Hydroxyacyl Coa Dehydrogenase
Revisited: Sequence Analysis And Crystal Structure
Determination
Length = 302
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 144/290 (49%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSSISTSTDAASVVHSTDLVVEAIVENLKVKSELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P +M L+E+V+T TS + + L+
Sbjct: 135 NTSSLQITSLANATTRQDRFAGLHFFNPVPLMKLVEVVKTPMTSQKTLESLVDFSKTLGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPY-SQSARLLVSLGVDVFRIDSAIR-SFGLPIGPFQLLDLAG 539
+ GF VNR PY ++ RL ID+A++ G P+GPF+LLD G
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLIEAVRLYERGDASKEDIDTAMKLGAGYPMGPFELLDYVG 254
Query: 540 YGVAAAT---SKEFDKAFPDRSFQ-SPLVDLLLKSGRNGKANGKGLYTYE 585
E D P FQ SP ++ L+ + GK G+G Y Y+
Sbjct: 255 LDTTKFIIDGWHEMDSQNP--LFQPSPAMNKLVAENKFGKKTGEGFYKYK 302
>pdb|1F12|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With 3-
Hydroxybutyryl-Coa
pdb|1F12|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With 3-
Hydroxybutyryl-Coa
pdb|1F14|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase (Apo)
pdb|1F14|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase (Apo)
pdb|1F17|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
pdb|1F17|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
Length = 310
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDECVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1LSO|A Chain A, Crystal Structure Of The S137a Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
pdb|1LSO|B Chain B, Crystal Structure Of The S137a Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
Length = 302
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NT+++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTASLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1LSJ|A Chain A, Crystal Structure Of The E110q Mutant Of L-3-hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
pdb|1LSJ|B Chain B, Crystal Structure Of The E110q Mutant Of L-3-hydroxyacyl-
Coa Dehydrogenase In Complex With Nad
Length = 302
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA+++++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVQNLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1IL0|A Chain A, X-Ray Crystal Structure Of The E170q Mutant Of Human L-3-
Hydroxyacyl-Coa Dehydrogenase
pdb|1IL0|B Chain B, X-Ray Crystal Structure Of The E170q Mutant Of Human L-3-
Hydroxyacyl-Coa Dehydrogenase
Length = 302
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P VM L+++++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVQVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1M76|A Chain A, Crystal Structure Of The S137c Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
pdb|1M76|B Chain B, Crystal Structure Of The S137c Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
Length = 302
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 141/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NT ++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTCSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF VNR PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVNRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|1M75|A Chain A, Crystal Structure Of The N208s Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
pdb|1M75|B Chain B, Crystal Structure Of The N208s Mutant Of L-3-Hydroxyacyl-
Coa Dehydrogenase In Complex With Nad And
Acetoacetyl-Coa
Length = 302
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 142/290 (48%), Gaps = 14/290 (4%)
Query: 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD 367
V+ V VIGGGLMG+GIA VVL + + L K K IE ++R + +
Sbjct: 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENP 74
Query: 368 KANNAL--KMLKGVLDYSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
KA + K L + ++ V D+V+EA++E++ +K ++F L+K H I A+
Sbjct: 75 KAGDEFVEKTLSTIATSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFAS 134
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXX 481
NTS++ + + T+ QDR G HFF+P VM L+E+++T TS + L+
Sbjct: 135 NTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLVEVIKTPMTSQKTFESLVDFSKALGK 194
Query: 482 XXXXXXNCTGFAVNRAFFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLA 538
+ GF V+R PY A L G D + ID+A++ G P+GPF+LLD
Sbjct: 195 HPVSCKDTPGFIVSRLLVPYLMEAIRLYERG-DASKEDIDTAMKLGAGYPMGPFELLDYV 253
Query: 539 GYGVAAATS---KEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
G E D P SP ++ L+ + GK G+G Y Y+
Sbjct: 254 GLDTTKFIVDGWHEMDAENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 302
>pdb|3PEA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
pdb|3PEA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Anthracis Str. 'ames Ancestor'
Length = 261
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 125/282 (44%), Gaps = 37/282 (13%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A+ TL + P NA + + + + ++ D+++ +V+ G G FS G DI F
Sbjct: 13 EDHIAVATLNHAPANAXSSQVXHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFT 72
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
V A + + + ++ +E C KP+ CH R A +L
Sbjct: 73 SVTEAKQATELAQLG-QVTFERVEKCSKPVIAAIHGAALGGGLEFAXSCHXRFATESAKL 131
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
GLPELTLG+IPGF GTQRLPR VG +KA E L S IT E K GL++ V E L
Sbjct: 132 GLPELTLGLIPGFAGTQRLPRYVGKAKACEXXLTSTPITGAEALKWGLVNGVFAEETFLD 191
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVI 251
+ A IA + S + AR VL+L LQ K++
Sbjct: 192 DTLKVAKQIAGK---------------SPATARAVLEL--LQTTKSSHY----------- 223
Query: 252 EEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293
Y GV +EA++F E+ + R V F +R S
Sbjct: 224 --------YEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPS 257
>pdb|2HDH|A Chain A, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
pdb|2HDH|B Chain B, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
Length = 293
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 127/273 (46%), Gaps = 17/273 (6%)
Query: 324 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL--KMLKGVLD 381
AT H VVL + + L K K IE ++R + + KA + K L +
Sbjct: 25 ATGHT-----VVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVAKTLSTIAT 79
Query: 382 YSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 437
++ V D+V+EA++E++ +K ++F L+K H I A+NTS++ + + T+
Sbjct: 80 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKRAAEHTIFASNTSSLQITSIANATTR 139
Query: 438 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRA 497
QDR G HFF+P V L+E+++T TS + L+ + GF VNR
Sbjct: 140 QDRFAGLHFFNPVPVXKLVEVIKTPXTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRL 199
Query: 498 FFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554
PY A L G D + ID+A + G P GPF+LLD G + +
Sbjct: 200 LVPYLXEAIRLYERG-DASKEDIDTAXKLGAGYPXGPFELLDYVGLDTTKFIVDGWHEXD 258
Query: 555 PDRSFQ--SPLVDLLLKSGRNGKANGKGLYTYE 585
+ SP ++ L+ + GK G+G Y Y+
Sbjct: 259 AENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 291
>pdb|3RQS|A Chain A, Crystal Structure Of Human L-3- Hydroxyacyl-Coa
Dehydrogenase (Ec1.1.1.35) From Mitochondria At The
Resolution 2.0 A, Northeast Structural Genomics
Consortium Target Hr487, Mitochondrial Protein
Partnership
pdb|3RQS|B Chain B, Crystal Structure Of Human L-3- Hydroxyacyl-Coa
Dehydrogenase (Ec1.1.1.35) From Mitochondria At The
Resolution 2.0 A, Northeast Structural Genomics
Consortium Target Hr487, Mitochondrial Protein
Partnership
Length = 324
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 127/274 (46%), Gaps = 19/274 (6%)
Query: 324 ATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNAL--KMLKGVLD 381
AT H VVL + + L K K IE ++R + + KA + K L +
Sbjct: 58 ATGHT-----VVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIAT 112
Query: 382 YSEFKDV----DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS 437
++ V D+V+EA++E++ +K ++F L+K H I A+NTS++ + + T+
Sbjct: 113 STDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTR 172
Query: 438 QDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNCTGFAVNRA 497
QDR G HFF+P V L+E+++T TS + L+ + GF VNR
Sbjct: 173 QDRFAGLHFFNPVPVXKLVEVIKTPXTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRL 232
Query: 498 FFPYSQSARLLVSLGVDVFR--IDSAIR-SFGLPIGPFQLLDLAGYGVAAATS---KEFD 551
PY A L G D + ID+A + G P GPF+LLD G E D
Sbjct: 233 LVPYLXEAIRLYERG-DASKEDIDTAXKLGAGYPXGPFELLDYVGLDTTKFIVDGWHEXD 291
Query: 552 KAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYE 585
P SP ++ L+ + GK G+G Y Y+
Sbjct: 292 AENPLHQ-PSPSLNKLVAENKFGKKTGEGFYKYK 324
>pdb|3MOY|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycob Smegmatis
Length = 263
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 14 GVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
GV +I L P +NAL + A + D + + ++ AIV+TG+ F+ G DI
Sbjct: 19 GVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADI----- 73
Query: 73 VHGAGDVSLMPDVSVELVV----NLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
A V+L P + E + + + +KPI M C IAA
Sbjct: 74 ---AEMVTLTPHQARERNLLSGWDSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADT 130
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
+ G PE+TLG++PG GGTQRL R VG +KA+++ L +S+T+EE ++GL+ +V + +
Sbjct: 131 ARFGQPEITLGILPGLGGTQRLTRAVGKAKAMDLCLTGRSLTAEEAERVGLVSRIVPAAD 190
Query: 189 LLKVSRLWALDIAARRKPWIRSL 211
LL + A IA +P R++
Sbjct: 191 LLDEALAVAQRIARMSRPAGRAV 213
>pdb|4DYD|A Chain A, Substrate-Directed Dual Catalysis Of Dicarbonyl Compounds
By Diketoreductase
pdb|4E12|A Chain A, Substrate-Directed Dual Catalysis Of Dicarbonyl Compounds
By Diketoreductase
pdb|4E13|A Chain A, Substrate-Directed Dual Catalysis Of Dicarbonyl Compounds
By Diketoreductase
Length = 283
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 132/292 (45%), Gaps = 25/292 (8%)
Query: 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT-RGKLT 365
G+ V V+G G++GS IA + V ++N++ L K E GL K
Sbjct: 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFE----GLAAVYEKEV 58
Query: 366 QDKANNALKMLKGVLDYSE-----FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
A+ A + G + YS+ KD D+VIEAV ES+ LK+ I+++L + P I A
Sbjct: 59 AGAADGAAQKALGGIRYSDDLAQAVKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFA 118
Query: 421 TNTST-IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXX 479
TN+ST + ++VG T D+ + HF + V E++ T +T +V ++
Sbjct: 119 TNSSTLLPSDLVG-YTGRGDKFLALHFANHVWVNNTAEVMGTTKTDPEVYQQVVEFASAI 177
Query: 480 XXX-XXXXXNCTGFAVNRAFFP-YSQSARLLVSLGVDVFRIDSAIR-SFGLPIGPFQLLD 536
G+ +N P +A LLV D ID R G P GPF++ D
Sbjct: 178 GMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFD 237
Query: 537 LAG----YGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTY 584
+ G Y +++ + + R F + L + + G+ G A G+G Y Y
Sbjct: 238 IVGLTTAYNISSVSGPK------QREFAAYLKENYIDKGKLGLATGEGFYRY 283
>pdb|1ZEJ|A Chain A, Crystal Structure Of The 3-Hydroxyacyl-Coa Dehydrogenase
(Hbd-9, Af2017) From Archaeoglobus Fulgidus Dsm 4304 At
2.00 A Resolution
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 125/281 (44%), Gaps = 29/281 (10%)
Query: 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369
KV VIG GL G GIA A I + VVL++V+ K +EA R + L++ +
Sbjct: 14 KVFVIGAGLXGRGIAIA-IASKHEVVLQDVSE-------KALEA-AREQIPEELLSKIEF 64
Query: 370 NNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429
L+ +K D D+V EAV E + K ++ E+E+ + L +NTS I ++
Sbjct: 65 TTTLEKVK---------DCDIVXEAVFEDLNTKVEVLREVERLT--NAPLCSNTSVISVD 113
Query: 430 IVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTXXXXXXXXXXXXXNC 489
+ E+ S R +G H+ +P HV PL+EIV + T ++ + + C
Sbjct: 114 DIAERLDSPSRFLGVHWXNPPHVXPLVEIVISRFTDSKTVAFVEGFLRELGKEVVV---C 170
Query: 490 TGFA-VNRAFFPYSQSARLLVSLGVDVFRIDSAIR-SFGL---PIGPFQLLDLAGYGVAA 544
G + VNR A + GV +D + GL GP LD G VA
Sbjct: 171 KGQSLVNRFNAAVLSEASRXIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAY 230
Query: 545 ATSKEFDKAFPDRSFQSP-LVDLLLKSGRNGKANGKGLYTY 584
S K F D F+ P + +K G G GKG+Y Y
Sbjct: 231 YASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEY 271
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 632 VVNESCRVLEEGIVVRASDLDDA--SVLGMSFPSYRGGIVFWADAVGANYVY-TSLKKWS 688
V++E+ R +EEG VRA D+D LG+ + + G + D +G + Y SL +
Sbjct: 183 VLSEASRXIEEG--VRAEDVDRVWKHHLGLLYTLF--GPLGNLDYIGLDVAYYASLYLYK 238
Query: 689 QLYGNFFKPSRFLEERATKG 708
+ FKP +L+E+ KG
Sbjct: 239 RFGDEKFKPPEWLQEKIKKG 258
>pdb|4FZW|A Chain A, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|B Chain B, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 258
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V ++TL P NAL ++ L ++ E A + + V+TGN F+ G D+N +
Sbjct: 15 VLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEK 74
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGL 133
A ++ D +L L + KP+ + C +A + GL
Sbjct: 75 DLAATLN---DTRPQLWARL-QAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGL 130
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
PE+TLG++PG GGTQRL R VG S A +M+L +SIT+++ + GL+ V S+ L+
Sbjct: 131 PEITLGIMPGAGGTQRLIRSVGKSLASKMVLSGESITAQQAQQAGLVSDVFPSDLTLE-- 188
Query: 194 RLWALDIA---ARRKP 206
+AL +A AR P
Sbjct: 189 --YALQLASKMARHSP 202
>pdb|3H81|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3H81|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 278
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI
Sbjct: 35 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEM--- 91
Query: 74 HGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
D++ + + + + P M C IAA +
Sbjct: 92 ---ADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKF 148
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+ LGV+PG GG+QRL R +G +KA++++L +++ + E + GL+ VV +++LL
Sbjct: 149 GQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLT 208
Query: 192 VSRLWALDIA 201
+R A I+
Sbjct: 209 EARATATTIS 218
>pdb|3Q0J|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
pdb|3Q0J|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Complex With The Inhibitor Acetoacetylcoa
Length = 258
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI
Sbjct: 15 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEM--- 71
Query: 74 HGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
D++ + + + + P M C IAA +
Sbjct: 72 ---ADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKF 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+ LGV+PG GG+QRL R +G +KA++++L +++ + E + GL+ VV +++LL
Sbjct: 129 GQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLT 188
Query: 192 VSRLWALDIA 201
+R A I+
Sbjct: 189 EARATATTIS 198
>pdb|3PZK|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3PZK|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase In Apo Form
pdb|3Q0G|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|C Chain C, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|D Chain D, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|E Chain E, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
pdb|3Q0G|F Chain F, Crystal Structure Of The Mycobacterium Tuberculosis
Crotonase Bound To A Reaction Intermediate Derived From
Crotonyl Coa
Length = 257
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI
Sbjct: 14 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEM--- 70
Query: 74 HGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
D++ + + + + P M C IAA +
Sbjct: 71 ---ADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKF 127
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
G PE+ LGV+PG GG+QRL R +G +KA++++L +++ + E + GL+ VV +++LL
Sbjct: 128 GQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLT 187
Query: 192 VSRLWALDIA 201
+R A I+
Sbjct: 188 EARATATTIS 197
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN-- 68
N V +I L P +NAL ++ L E V AIVLTG F+ G DI
Sbjct: 12 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM 71
Query: 69 ---VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
FQ + +S ++ KKP+ M C A
Sbjct: 72 QNRTFQDCYSGKFLSHWDHIT---------RIKKPVIAAVNGYALGGGCELAMMCDIIYA 122
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
K Q G PE+ LG IPG GGTQRL R VG S A+EM+L I++++ + GL+ +
Sbjct: 123 GEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFP 182
Query: 186 SEELLKVSRLWALDIAARRK 205
E L++ + A IA K
Sbjct: 183 VETLVEEAIQCAEKIANNSK 202
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN-- 68
N V +I L P +NAL ++ L E V AIVLTG F+ G DI
Sbjct: 14 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM 73
Query: 69 ---VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
FQ + +S ++ KKP+ M C A
Sbjct: 74 QNRTFQDCYSGKFLSHWDHIT---------RIKKPVIAAVNGYALGGGCELAMMCDIIYA 124
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
K Q G PE+ LG IPG GGTQRL R VG S A+EM+L I++++ + GL+ +
Sbjct: 125 GEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFP 184
Query: 186 SEELLKVSRLWALDIAARRK 205
E L++ + A IA K
Sbjct: 185 VETLVEEAIQCAEKIANNSK 204
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN-- 68
N V +I L P +NAL ++ L E V AIVLTG F+ G DI
Sbjct: 15 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEM 74
Query: 69 ---VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
FQ + +S ++ KKP+ M C A
Sbjct: 75 QNRTFQDCYSGKFLSHWDHIT---------RIKKPVIAAVNGYALGGGCELAMMCDIIYA 125
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
K Q G PE+ LG IPG GGTQRL R VG S A+EM+L I++++ + GL+ +
Sbjct: 126 GEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFP 185
Query: 186 SEELLKVSRLWALDIAARRK 205
E L++ + A IA K
Sbjct: 186 VETLVEEAIQCAEKIANNSK 205
>pdb|2PBP|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) From Geobacillus Kaustophilus Hta426
pdb|2QQ3|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|G Chain G, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|H Chain H, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|I Chain I, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|J Chain J, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|K Chain K, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
pdb|2QQ3|L Chain L, Crystal Structure Of Enoyl-Coa Hydrates Subunit I
(Gk_2039) Other Form From Geobacillus Kaustophilus
Hta426
Length = 258
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 14 GVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
V II L P V NAL+ +VA + E + V+ IVLTG G F+ G DI K
Sbjct: 14 AVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAK 73
Query: 73 VHGAGDVSLMPDVSVEL-VVNLIED------CKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
D + L +N D K P+ + C +A
Sbjct: 74 -----------DDPIRLEWLNQFADWDRLSIVKTPMIAAVNGLALGGGFELALSCDLIVA 122
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ + G PE+ LGV+PG GGTQRL +L+G +A+E + ++++E +LG+++ VV+
Sbjct: 123 SSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKRALEWLWTGARMSAKEAEQLGIVNRVVS 182
Query: 186 SEELLK 191
E L++
Sbjct: 183 PELLME 188
>pdb|3HRX|A Chain A, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|B Chain B, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|C Chain C, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|D Chain D, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|E Chain E, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
pdb|3HRX|F Chain F, Crystal Structure Of Phenylacetic Acid Degradation Protein
Paag
Length = 254
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 96/196 (48%), Gaps = 14/196 (7%)
Query: 12 NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGV ++TL P +NA+ ++ L +E +V+A++LTG G FS G D+ F
Sbjct: 7 QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEF 66
Query: 71 QKVHGAGDVSLMPDVSVEL-----VVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
GD PD L VV + +KP+ + R+A
Sbjct: 67 ------GDRK--PDYEAHLRRYNRVVEALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLA 118
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
A + +G++P G + LPRLVGL+KA E++LLS +++EE LGL+ VV
Sbjct: 119 AVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLLLSPRLSAEEALALGLVHRVVP 178
Query: 186 SEELLKVSRLWALDIA 201
+E+L++ + A ++A
Sbjct: 179 AEKLMEEALSLAKELA 194
>pdb|3KQF|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|C Chain C, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|D Chain D, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|E Chain E, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis.
pdb|3KQF|F Chain F, 1.8 Angstrom Resolution Crystal Structure Of Enoyl-Coa
Hydratase From Bacillus Anthracis
Length = 265
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 9/146 (6%)
Query: 41 EEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGDVSLMPDVS-VELVVNLIEDCK 98
EEA +R ++LTG G + F G D+ ++ G + + VS + +E
Sbjct: 50 EEANTR----VVILTGAGEKAFCAGADL---KERAGXNEEQVRHAVSXIRTTXEXVEQLP 102
Query: 99 KPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158
+P+ + C RIAA LGL E TL +IPG GGTQRLPRL+G+ +
Sbjct: 103 QPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVGR 162
Query: 159 AIEMMLLSKSITSEEGWKLGLIDAVV 184
A E++ + I+++E + GL++ VV
Sbjct: 163 AKELIYTGRRISAQEAKEYGLVEFVV 188
>pdb|2HW5|A Chain A, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|B Chain B, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|C Chain C, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|D Chain D, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|E Chain E, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
pdb|2HW5|F Chain F, The Crystal Structure Of Human Enoyl-Coenzyme A (Coa)
Hydratase Short Chain 1, Echs1
Length = 286
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 9/197 (4%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
N+ V +I L P +NAL ++ L + V AIVLTG F+ G DI
Sbjct: 40 NNTVGLIQLNRPKALNALCDGLIDELNQALKIFEEDPAVGAIVLTGGDKAFAAGADIKEM 99
Query: 71 QKVHGAGDVSLMPDVSVELVVNL--IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
Q ++S S + + + + KKP+ M C A K
Sbjct: 100 Q------NLSFQDCYSSKFLKHWDHLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEK 153
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
Q PE+ +G IPG GGTQRL R VG S A+EM+L I++++ + GL+ + E
Sbjct: 154 AQFAQPEILIGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVET 213
Query: 189 LLKVSRLWALDIAARRK 205
L++ + A IA+ K
Sbjct: 214 LVEEAIQCAEKIASNSK 230
>pdb|2IEX|A Chain A, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|B Chain B, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
pdb|2IEX|C Chain C, Crystal Structure Of Dihydroxynapthoic Acid Synthetase
(Gk2873) From Geobacillus Kaustophilus Hta426
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVF 70
+G+A IT+ P V NA V + D F +A ++ I+LTG GG+ F G D
Sbjct: 20 NGIAKITINRPEVHNAFRPKTVNEMIDAFTKARDDSNIGVIILTGAGGKAFCSGGD---- 75
Query: 71 QKVHGAGDV---SLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
QKV G G +P ++V + LI KP+ + C IAA
Sbjct: 76 QKVRGHGGYVGEDEIPRLNVLDLQRLIRVIPKPVIAMVAGYAIGGGHVLHVVCDLTIAAD 135
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
G +G G G L R+VG KA E+ L + T++E ++GL++ VV E
Sbjct: 136 NAIFGQTGPKVGSFDGGYGAGYLARIVGHKKAREIWYLCRQYTAQEALEMGLVNKVVPLE 195
Query: 188 ELLKVSRLWALDIAARRKPWIRSL 211
+L + + WA +I + IR L
Sbjct: 196 QLEEETVKWAQEILEKSPTAIRFL 219
>pdb|4DI1|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
pdb|4DI1|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa17 From
Mycobacterium Marinum
Length = 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 10 VGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V + G+A + + PP NA+ + + +E RDD+ A+VL G FS G D+
Sbjct: 29 VADQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPE 88
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
+ ++ A + V +E ++ + KP + R++
Sbjct: 89 LRTLN-APEADTAARVRLE-AIDAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNV 146
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+ G E+ G+IPG GG RL R+VG S+A E++ + +EE LGLID +V +++
Sbjct: 147 KFGATEILAGLIPGGGGMGRLTRVVGSSRAKELVFSGRFFDAEEALALGLIDDMVAPDDV 206
Query: 190 LKVSRLWA 197
+ WA
Sbjct: 207 YDSAVAWA 214
>pdb|3HIN|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
pdb|3HIN|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Rhodopseudomonas Palustris Cga009
Length = 275
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NAL ++A LKD + D ++A+V+ G G FS G D++ ++ L+
Sbjct: 38 NALNDGLMAALKDCLTDIP--DQIRAVVIHGIGDHFSAGLDLSELRERDAT--EGLVHSQ 93
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFG 145
+ V + I+ C+ P+ H R+A LPE + G+ G G
Sbjct: 94 TWHRVFDKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGG 153
Query: 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEG 174
G+ RLPRL+G+++ +MML + ++ EG
Sbjct: 154 GSVRLPRLIGVARMADMMLTGRVYSAAEG 182
>pdb|3QKA|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
pdb|3QKA|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa5 From
Mycobacterium Marinum
Length = 261
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
Query: 8 MEVGNDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
++V +G +IN P NA+ P A L F E + VL GNGG F G
Sbjct: 10 VQVERNGPVTTVIINRPQARNAVNGPTAAALYSAFAEFDRDESASVAVLCGNGGTFCAGA 69
Query: 66 DINVF-----QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGC 120
D+ F VH G + P + KP+ + C
Sbjct: 70 DLKAFGTAEANAVHRTGPGPMGPSRMM---------LSKPVIAAVSGYAVAGGLELALWC 120
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
R+A G+ GV GGT RLPRL+G S+A++M+L +++ ++E +GL
Sbjct: 121 DLRVAEQDAVFGVFCRRWGVPLIDGGTVRLPRLIGHSRAMDMILTGRAVQADEALAIGLA 180
Query: 181 DAVV 184
+ VV
Sbjct: 181 NRVV 184
>pdb|3G64|A Chain A, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|B Chain B, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
pdb|3G64|C Chain C, Crystal Structure Of Putative Enoyl-Coa Hydratase From
Streptomyces Coelicolor A3(2)
Length = 279
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGVA +TL P +NAL A L+D E + R V+A+VL G G F G D++
Sbjct: 24 TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEI 83
Query: 71 QKVHGAGDVSLMPDVS--VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ D + + D + VV + +C P+ + R+A P
Sbjct: 84 IGATLSXDTARLLDFNRXTGQVVRAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPS 143
Query: 129 TQLGLPELTLGVIPG-FGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
T+ +G+ G G LPR+VGL A ++ L ++ + E ++GLI +
Sbjct: 144 TRFAFLFTRVGLSGGDXGAAYLLPRVVGLGHATRLLXLGDTVRAPEAERIGLISELTEEG 203
Query: 188 ELLKVSRLWALDIA 201
+ +R A +A
Sbjct: 204 RADEAARTLARRLA 217
>pdb|2PPY|A Chain A, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|B Chain B, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|C Chain C, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|D Chain D, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|E Chain E, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
pdb|2PPY|F Chain F, Crystal Structure Of Enoyl-Coa Hydrates (Gk_1992) From
Geobacillus Kaustophilus Hta426
Length = 265
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 118 MGCHARIAAPKT-QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
+ C R + ++GLPE++LGV+ G GGTQRL RL+G S+A++ + ++IT +E +
Sbjct: 121 LACDLRFXGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRALDXNITGETITPQEALE 180
Query: 177 LGLIDAVVTSEELLKVSRLWALDIA 201
+GL++ V E + +R +A +A
Sbjct: 181 IGLVNRVFPQAETRERTREYARKLA 205
>pdb|1HZD|A Chain A, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|B Chain B, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|C Chain C, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|D Chain D, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|E Chain E, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|1HZD|F Chain F, Crystal Structure Of Human Auh Protein, An Rna-Binding
Homologue Of Enoyl-Coa Hydratase
pdb|2ZQQ|A Chain A, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|B Chain B, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|C Chain C, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|D Chain D, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|E Chain E, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQQ|F Chain F, Crystal Structure Of Human Auh (3-Methylglutaconyl-Coa
Hydratase) Mixed With (Auuu)24a Rna
pdb|2ZQR|A Chain A, Crystal Structure Of Auh Without Rna
pdb|2ZQR|B Chain B, Crystal Structure Of Auh Without Rna
pdb|2ZQR|C Chain C, Crystal Structure Of Auh Without Rna
pdb|2ZQR|D Chain D, Crystal Structure Of Auh Without Rna
pdb|2ZQR|E Chain E, Crystal Structure Of Auh Without Rna
pdb|2ZQR|F Chain F, Crystal Structure Of Auh Without Rna
Length = 272
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMPD 84
N+L+ ++ L + S V+ I++ G F G D+ K+ + + P
Sbjct: 34 NSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSSS---EVGPF 90
Query: 85 VS-VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPG 143
VS + V+N I + P + C R+AA ++GL E L +IPG
Sbjct: 91 VSKIRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPG 150
Query: 144 FGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201
GGTQRLPR +G+S A E++ ++ + +E +GLI V+ + + ALD+A
Sbjct: 151 GGGTQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLA 208
>pdb|3RSI|A Chain A, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|B Chain B, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3RSI|C Chain C, The Structure Of A Putative Enoyl-Coa HydrataseISOMERASE
FROM Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 265
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 4/196 (2%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG 58
M+A R + V DG +I +N P NAL+ +V+ ++E D ++A +LTG G
Sbjct: 5 MSAARELL-VERDGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAG 63
Query: 59 GRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXM 118
+ G D++ V L P ++ + L KP+
Sbjct: 64 SAYCVGGDLSDGWMVRDGSAPPLDP-ATIGKGLLLSHTLTKPLIAAVNGACLGGGCEMLQ 122
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
R++ GLPE+ G++PG G RL R + +KA+EM+L + +T+ E + G
Sbjct: 123 QTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQIPYTKAMEMILTGEPLTAFEAYHFG 182
Query: 179 LIDAVVTSEELLKVSR 194
L+ VV + L +R
Sbjct: 183 LVGHVVPAGTALDKAR 198
>pdb|3T88|A Chain A, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|B Chain B, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|C Chain C, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|D Chain D, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|E Chain E, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T88|F Chain F, Crystal Structure Of Escherichia Coli Menb In Complex With
Substrate Analogue, Osb-Ncoa
pdb|3T89|A Chain A, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|B Chain B, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|C Chain C, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|D Chain D, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|E Chain E, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
pdb|3T89|F Chain F, Crystal Structure Of Escherichia Coli Menb, The
1,4-Dihydroxy-2- Naphthoyl-Coa Synthase In Vitamin K2
Biosynthesis
Length = 289
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 2/197 (1%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E DG+A IT+ P V NA V + +A D++ I+LTG G + F
Sbjct: 29 IRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS 88
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D V G D S + ++V I C KP+ M C
Sbjct: 89 GGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLT 148
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IAA G +G G G + R+VG KA E+ L + +++ +GL++ V
Sbjct: 149 IAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTV 208
Query: 184 VTSEELLKVSRLWALDI 200
V +L K + W ++
Sbjct: 209 VPLADLEKETVRWCREM 225
>pdb|4ELS|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELS|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Bicarbonate
pdb|4ELW|A Chain A, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|B Chain B, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|C Chain C, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|D Chain D, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|E Chain E, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELW|F Chain F, Structure Of E. Coli. 1,4-Dihydroxy-2- Naphthoyl Coenzyme
A Synthases (Menb) In Complex With Nitrate
pdb|4ELX|A Chain A, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|B Chain B, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|C Chain C, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|D Chain D, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|E Chain E, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
pdb|4ELX|F Chain F, Structure Of Apo E.Coli. 1,4-Dihydroxy-2- Naphthoyl Coa
Synthases With Cl
Length = 285
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 2/197 (1%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E DG+A IT+ P V NA V + +A D++ I+LTG G + F
Sbjct: 25 IRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCS 84
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D V G D S + ++V I C KP+ M C
Sbjct: 85 GGDQKVRGDYGGYKDDSGVHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLT 144
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IAA G +G G G + R+VG KA E+ L + +++ +GL++ V
Sbjct: 145 IAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTV 204
Query: 184 VTSEELLKVSRLWALDI 200
V +L K + W ++
Sbjct: 205 VPLADLEKETVRWCREM 221
>pdb|3TRR|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3TRR|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 256
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 84/198 (42%), Gaps = 25/198 (12%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF- 70
D V +IT+ P NA+ + GL ++ S D+ ++TG GG F G D+ F
Sbjct: 15 DRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFV 74
Query: 71 -----QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
G G ++ P +KPI + C +A
Sbjct: 75 SGEAVLSERGLGFTNVPP--------------RKPIIAAVEGFALAGGTELVLSCDLVVA 120
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ G+PE+ G++ G GG RLP + A+E+ L +S T+E+ K G I+ +V
Sbjct: 121 GRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVAMELALTGESFTAEDAAKYGFINRLVD 180
Query: 186 SEELLKVSRLWALDIAAR 203
+ L AL++AA+
Sbjct: 181 DGQALDT----ALELAAK 194
>pdb|3P85|A Chain A, Crystal Structure Enoyl-Coa Hydratase From Mycobacterium
Avium
Length = 270
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKF----EEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V +TL P NAL+ A L+D+F +A + DDV +++TG F G D+
Sbjct: 35 VRTLTLNRPQARNALS----AALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKE 90
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
G S +PD+S KP+ + C IA+
Sbjct: 91 L------GGSSALPDISPRWPA-----LTKPVIGAINGAAVTGGLELALYCDILIASENA 139
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+ +G++P +G + RLP+ VG+ A M L +++ + + GL+ VV ++L
Sbjct: 140 RFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQL 199
Query: 190 LKVSRLWALDIAARRKPWIRSL----HRTD 215
L +R A I + +R+L HR D
Sbjct: 200 LGAARAVAASIVGNNQNAVRALLTSYHRID 229
>pdb|3SLL|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|D Chain D, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|E Chain E, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SLL|F Chain F, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 9/208 (4%)
Query: 15 VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
+A++TL P +NA+A ++ K + + +DV+A+V+TG G F G D +
Sbjct: 34 IALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPI 93
Query: 74 HGAGDVSLMPDV---SVELVVNLIEDCKK---PIXXXXXXXXXXXXXXXXMGCHARIAAP 127
G ++ P + S+EL+ +I ++ P+ + C R+A+
Sbjct: 94 PHIGGLT-QPTIALRSMELLDEVILTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQ 152
Query: 128 KTQLGLPELTLGVIPG-FGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
+ G+ G + LPR +G S+A ++ML + + ++E ++GL+ V S
Sbjct: 153 DAYFRAAGINNGLTASELGLSYLLPRAIGTSRASDIMLTGRDVDADEAERIGLVSRKVAS 212
Query: 187 EELLKVSRLWALDIAARRKPWIRSLHRT 214
E LL+ IA +P I RT
Sbjct: 213 ESLLEECYAIGERIAGFSRPGIELTKRT 240
>pdb|3H02|A Chain A, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|B Chain B, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|C Chain C, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|D Chain D, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|E Chain E, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium.
pdb|3H02|F Chain F, 2.15 Angstrom Resolution Crystal Structure Of Naphthoate
Synthase From Salmonella Typhimurium
Length = 288
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 76/194 (39%), Gaps = 2/194 (1%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E DG+A IT+ P V NA V +A D+V I+LTG G + F
Sbjct: 28 IRYEKSTDGIAKITINRPQVRNAFRPLTVKEXIQALADARYDDNVGVIILTGEGDKAFCA 87
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D V G D S + ++V I C KP+ C
Sbjct: 88 GGDQKVRGDYGGYQDDSGVHHLNVLDFQRQIRTCPKPVVAXVAGYSIGGGHVLHXXCDLT 147
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IAA G +G G G R+VG KA E+ L + +++ GL++ V
Sbjct: 148 IAAENAIFGQTGPKVGSFDGGWGASYXARIVGQKKAREIWFLCRQYDAQQALDXGLVNTV 207
Query: 184 VTSEELLKVSRLWA 197
V +L K + W
Sbjct: 208 VPLADLEKETVRWC 221
>pdb|2UZF|A Chain A, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
pdb|2UZF|B Chain B, Crystal Structure Of Staphylococcus Aureus
1,4-Dihydroxy-2- Naphthoyl Coa Synthase (Menb) In
Complex With Acetoacetyl Coa
Length = 273
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 89/220 (40%), Gaps = 14/220 (6%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVF 70
+G+A +T+ P V NA VA + D F A +V IVLTG G F G D
Sbjct: 21 EGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGD---- 76
Query: 71 QKVHGAGDV---SLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
QK G G +P ++V + LI KP+ + C IAA
Sbjct: 77 QKKRGHGGYVGEDQIPRLNVLDLQRLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAAD 136
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
G +G G+ L R+VG KA E+ L + ++E +GL++ VV E
Sbjct: 137 NAIFGQTGPKVGSFDAGYGSGYLARIVGHKKAREIWYLCRQYNAQEALDMGLVNTVVPLE 196
Query: 188 ELLKVSRLWALDIAARRKPWIRSLH-----RTDKLGSLSE 222
++ + W +I +R L TD L L +
Sbjct: 197 KVEDETVQWCKEIMKHSPTALRFLKAAMNADTDGLAGLQQ 236
>pdb|3QRE|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase Echa12_1 From
Mycobacterium Marinum
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 9/209 (4%)
Query: 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
V E GVAIIT +NA + AG + A + ++ IVLTG G F G
Sbjct: 31 VLYEATPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAG 90
Query: 65 FDINVFQKVHG-------AGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXX 117
+ G A D +L D+ E + + +KP+
Sbjct: 91 AYLGSADAAAGYDKTMAKAKDANLA-DLVGERPPHFVTMLRKPVIAAINGPCVGIGLTQA 149
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
+ C R AA + G+I FG + LPRL + A++++L ++ +EE +L
Sbjct: 150 LMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRLTSWAVALDLLLSGRTFLAEEAAQL 209
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKP 206
GL+ VVT E+L+ + +A DIA P
Sbjct: 210 GLVKEVVTPEQLMPRALEYAEDIARYCSP 238
>pdb|3QYR|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
pdb|3QYR|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa16_2
Mycobacterium Paratuberculosis Atcc Baa-968 K-10
Length = 253
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 24/210 (11%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKF----EEATSRDDVKAIVLTGNGGRFSGGFDINV 69
V +TL P NAL+ A L+D+F +A + DDV +++TG F G D+
Sbjct: 18 VRTLTLNRPQARNALS----AALRDRFFGALADAETDDDVDVVIITGADPVFCAGLDLKE 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
G S +PD+S KP+ + C IA+
Sbjct: 74 L------GGSSALPDISPRWPA-----LTKPVIGAINGAAVTGGLELALYCDILIASENA 122
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+ +G++P +G + RLP+ VG+ A M L +++ + + GL+ VV ++L
Sbjct: 123 RFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAADALRAGLVTEVVPHDQL 182
Query: 190 LKVSRLWALDIAARRKPWIRSL----HRTD 215
L ++ A I + +R+L HR D
Sbjct: 183 LGAAQAVAASIVGNNQNAVRALLASYHRID 212
>pdb|1JXZ|A Chain A, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|B Chain B, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
pdb|1JXZ|C Chain C, Structure Of The H90q Mutant Of 4-Chlorobenzoyl-Coenzyme A
Dehalogenase Complexed With 4-Hydroxybenzoyl-Coenzyme A
(Product)
Length = 269
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF---DI 67
DGVA IT+ P NAL++ + + D A D V A+++TG F GF +I
Sbjct: 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
+ + V G D + + + +++ I K+P+ + I A
Sbjct: 70 PLDKGVAGVRDHFRIAALWWQQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICAD 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
+ T+G+ + L R+VG+ +A+E+ML ++++ EE GL+ V +
Sbjct: 130 SAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD 189
Query: 188 ELLKVSRLWALDIAA 202
E +V+ A ++AA
Sbjct: 190 EFREVAWKVARELAA 204
>pdb|1NZY|A Chain A, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
pdb|1NZY|C Chain C, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF---DI 67
DGVA IT+ P NAL++ + + D A D V A+++TG F GF +I
Sbjct: 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
+ + V G D + + +++ I K+P+ + I A
Sbjct: 70 PLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICAD 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
+ T+G+ + L R+VG+ +A+E+ML ++++ EE GL+ V +
Sbjct: 130 SAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTNRTLYPEEAKDWGLVSRVYPKD 189
Query: 188 ELLKVSRLWALDIAA 202
E +V+ A ++AA
Sbjct: 190 EFREVAWKVARELAA 204
>pdb|1NZY|B Chain B, 4-Chlorobenzoyl Coenzyme A Dehalogenase From Pseudomonas
Sp. Strain Cbs-3
Length = 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF---DI 67
DGVA IT+ P NAL++ + + D A D V A+++TG F GF +I
Sbjct: 10 EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREI 69
Query: 68 NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
+ + V G D + + +++ I K+P+ + I A
Sbjct: 70 PLDKGVAGVRDHFRIAALWWHQMIHKIIRVKRPVLAAINGVAAGGGLGISLASDMAICAD 129
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
+ T+G+ + L R+VG+ +A+E+ML +++ EE GL+ V +
Sbjct: 130 SAKFVCAWHTIGIGNDTATSYSLARIVGMRRAMELMLTDRTLYPEEAKDWGLVSRVYPKD 189
Query: 188 ELLKVSRLWALDIAA 202
E +V+ A ++AA
Sbjct: 190 EFREVAWKVARELAA 204
>pdb|3QXZ|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3QXZ|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 4/196 (2%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
DGVA++TL P N+ + + L ++ V+ IVLTG F G I+
Sbjct: 14 RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAA 73
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
+ A PD S V + + P+ + RI A + +
Sbjct: 74 AETFAA---PRNPDFSASPVQPAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGR 130
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
+P++ GV P LPRLVG + A E++L S +++ + GL + + + ++L
Sbjct: 131 YAIPQVRFGVAPDALAHWTLPRLVGTAVAAELLLTGASFSAQRAVETGLANRCLPAGKVL 190
Query: 191 KVSRLWALDIAARRKP 206
+ A DIA P
Sbjct: 191 GAALRMAHDIATNVAP 206
>pdb|4FZW|C Chain C, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
pdb|4FZW|D Chain D, Crystal Structure Of The Paaf-paag Hydratase-isomerase
Complex From E.coli
Length = 274
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 3/193 (1%)
Query: 14 GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN--VF 70
GV +TL P +N+ + A L + ++ D ++ ++LTG G F G D+N
Sbjct: 24 GVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNV 83
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
A D+ + + +V + KP+ +G IAA +
Sbjct: 84 DPTGPAPDLGMSVERFYNPLVRRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAK 143
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
+ LG+IP GGT LPR+ G ++A+ + LL +++E+ + G+I VV E L
Sbjct: 144 FVMAFSKLGLIPDCGGTWLLPRVAGRARAMGLALLGNQLSAEQAHEWGMIWQVVDDETLA 203
Query: 191 KVSRLWALDIAAR 203
++ A +A +
Sbjct: 204 DTAQQLARHLATQ 216
>pdb|3P5M|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
pdb|3P5M|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Avium
Length = 255
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 81/187 (43%), Gaps = 10/187 (5%)
Query: 8 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
+ V +DG + ++ P +NA+ P++ L +A + + V+A++LTG G F G
Sbjct: 8 ISVEHDGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGG 67
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
D+ + VV I KP+ + C +A
Sbjct: 68 DLTGGDTA--------GAADAANRVVRAITSLPKPVIAGVHGAAVGFGCSLALACDLVVA 119
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
AP + L +G++P G + LP L+G ++ M + ++ I++ ++ G+I + +
Sbjct: 120 APASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRMAMTAEKISAATAFEWGMISHITS 179
Query: 186 SEELLKV 192
++E V
Sbjct: 180 ADEYESV 186
>pdb|3PE8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 256
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
D V +TL P NAL+ + + +A + DDV +++TG F G D+
Sbjct: 16 TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKEL 75
Query: 71 QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
GD + +PD+S + D KP+ + C IA+ +
Sbjct: 76 ------GDTTELPDISPKW-----PDMTKPVIGAINGAAVTGGLELALYCDILIASENAK 124
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
+G++P +G + RLP+ VG+ A M L +++++ + GL+ VV ++LL
Sbjct: 125 FADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEVVAHDDLL 184
Query: 191 KVSRLWALDIAARRKPWIRSL----HRTDKL 217
+R A I + +R+L HR D L
Sbjct: 185 TAARRVAASIVGNNQKAVRALLDSYHRIDAL 215
>pdb|2VX2|A Chain A, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|B Chain B, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|C Chain C, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|D Chain D, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|E Chain E, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|F Chain F, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|G Chain G, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|H Chain H, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
pdb|2VX2|I Chain I, Crystal Structure Of Human Enoyl Coenzyme A Hydratase
Domain-Containing Protein 3 (Echdc3)
Length = 287
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 87/209 (41%), Gaps = 9/209 (4%)
Query: 4 PRVTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
PR T DG+ I L NP N L++ ++ L+ +D+K I+++ G FS
Sbjct: 32 PRPTSARQLDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFS 91
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHA 122
G D+ + G D + V+ I + P+ C
Sbjct: 92 SGHDLKELTEEQGR-DYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLATAAGCQLVASCDI 150
Query: 123 RIAAPKTQLGLPELTLGVI---PGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGL 179
+A+ K+ P + +G+ PG + +PR V A+EM+ + I+++E GL
Sbjct: 151 AVASDKSSFATPGVNVGLFCSTPGVALARAVPRKV----ALEMLFTGEPISAQEALLHGL 206
Query: 180 IDAVVTSEELLKVSRLWALDIAARRKPWI 208
+ VV EL + + A IA+ +P +
Sbjct: 207 LSKVVPEAELQEETMRIARKIASLSRPVV 235
>pdb|3Q1T|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
pdb|3Q1T|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 278
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 4/192 (2%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P + E+G+DGV + L +P +N++ + L D + V+A+++ G G FS
Sbjct: 19 PSLRCELGDDGVLTVVLDSPGLNSVGPQMHRDLADIWPVIDRDPAVRAVLVRGEGKAFSS 78
Query: 64 GFDINVFQKVHG--AGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCH 121
G ++ + G G + +M + +LV N+I +C P+ +
Sbjct: 79 GGSFDLIDETIGDYQGRIRIMREAR-DLVHNMI-NCDTPVVSAIRGPAVGAGLVVALLAD 136
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A +L LGV G P LVG++KA +L +++ EE ++GL+
Sbjct: 137 ISVAGRTAKLIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLLGEEAERIGLVS 196
Query: 182 AVVTSEELLKVS 193
V +++L +
Sbjct: 197 LCVDDDDVLSTA 208
>pdb|3QK8|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|D Chain D, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|E Chain E, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
pdb|3QK8|F Chain F, Crystal Structure Of Enoyl-Coa Hydratase Echa15 From
Mycobacterium Marinum In Complex With An Unknown Ligand
Length = 272
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 4/213 (1%)
Query: 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
P + E G GV + L +P +N++ + L D + DV+ +++ G G FS
Sbjct: 13 PSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSS 72
Query: 64 GFDINVFQKVHG--AGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCH 121
G + + G G + +M + +LV+NL+ + KP+ +
Sbjct: 73 GGSFELIDETIGDYEGRIRIMREAR-DLVLNLV-NLDKPVVSAIRGPAVGAGLVVALLAD 130
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+A+ ++ LGV G P LVG++KA +L ++++ EE ++GL+
Sbjct: 131 ISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKYYLLTCETLSGEEAERIGLVS 190
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRT 214
V +E+L + A ++A + IR R+
Sbjct: 191 TCVDDDEVLPTATRLAENLAQGAQNAIRWTKRS 223
>pdb|2EJ5|A Chain A, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
pdb|2EJ5|B Chain B, Crystal Structure Of Gk2038 Protein (Enoyl-Coa Hydratase
Subunit Ii) From Geobacillus Kaustophilus
Length = 257
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
VA +TL P +NA + A + ++A + +V+ +V+TG G F G D++ +
Sbjct: 13 VAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEE 72
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGL 133
GDV + ++ +E KP+ + C R+ + K
Sbjct: 73 MDHGDVLRSRYAPMMKALHHLE---KPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAP 129
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSIT 170
+ +G++P G LPRLVG +KA+E+ +L + +T
Sbjct: 130 AFIHVGLVPDAGHLYYLPRLVGRAKALELAVLGEKVT 166
>pdb|4EML|A Chain A, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|B Chain B, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|C Chain C, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|D Chain D, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|E Chain E, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
pdb|4EML|F Chain F, Synechocystis Sp. Pcc 6803
1,4-Dihydroxy-2-Naphthoyl-Coenzyme A Synthase (Menb) In
Complex With Bicarbonate
Length = 275
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 83/204 (40%), Gaps = 6/204 (2%)
Query: 14 GVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG--GFDINVF 70
G+A I + P NA V L D F A + + ++LTG G G F
Sbjct: 19 GIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGD 78
Query: 71 QKVHGAG---DVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
Q V G G D P ++V + LI K + + C IAA
Sbjct: 79 QSVRGEGGYIDDQGTPRLNVLDLQRLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAAD 138
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
G +G G G+ L R+VG KA E+ L + +++E ++G+++ VV +
Sbjct: 139 NAIFGQTGPKVGSFDGGFGSSYLARIVGQKKAREIWYLCRQYSAQEAERMGMVNTVVPVD 198
Query: 188 ELLKVSRLWALDIAARRKPWIRSL 211
L + WA +I ++ IR L
Sbjct: 199 RLEEEGIQWAKEILSKSPLAIRCL 222
>pdb|4F47|A Chain A, The Structure Of Enoyl-Coa Hydratase Echa19 From
Mycobacterium Marinum
Length = 278
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 5/205 (2%)
Query: 14 GVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
G +I +N P NAL+ ++ + + ++ + D++ +LTG GG F G D+
Sbjct: 28 GHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAAT 87
Query: 72 KVHGAGDVSLMPDVSVELVVNLIED--CKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
K GD + L++ KKP+ G R+AA
Sbjct: 88 K-KPPGDSFKDGSYDPSRIDALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESA 146
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+ G+ E + P G RL R + + A +++L + IT+ E ++GL+ VV +
Sbjct: 147 KFGISEAKWSLYPMGGSAVRLVRQIPYTVACDLLLTGRHITAAEAKEMGLVGHVVPDGQA 206
Query: 190 LKVSRLWALDIAARRKPWIRSLHRT 214
L + A IAA ++++ RT
Sbjct: 207 LTKALEIAEIIAANGPLAVQAILRT 231
>pdb|3R0O|A Chain A, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|B Chain B, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
pdb|3R0O|C Chain C, Crystal Structure Of Carnitinyl-Coa Hydratase From
Mycobacterium Avium
Length = 273
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 27/183 (14%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDI----- 67
VA+IT+ P NA+ + + D EEA +V A+V+TG G + F G D+
Sbjct: 25 VALITIDRPDARNAVNGAVSTAVGDALEEAQRDPEVWAVVITGAGDKSFCAGADLKAISR 84
Query: 68 --NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
N++ H P+ V+ D KP + IA
Sbjct: 85 GENLYHAEH--------PEWGFAGYVHHFID--KPTIAAVNGTALGGGSELALASDLVIA 134
Query: 126 APKTQLGLPELTLGVIPGFGG----TQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
GLPE+ G+I G GG ++LPR V A+E++L + +T+ + + GLI+
Sbjct: 135 CESASFGLPEVKRGLIAGAGGVFRIVEQLPRKV----ALELVLTGEPMTASDALRWGLIN 190
Query: 182 AVV 184
VV
Sbjct: 191 EVV 193
>pdb|3R9Q|A Chain A, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|B Chain B, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
pdb|3R9Q|C Chain C, Structure Of A Probable Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Abscessus Atcc 19977 DSM 44196
Length = 262
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 78/185 (42%), Gaps = 4/185 (2%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NA+ P A L F E + + VL G+ G F G D+ G L P
Sbjct: 33 NAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGN---ELHPHG 89
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFG 145
+ + + KP+ + C R+ LG+ GV G
Sbjct: 90 PGPMGPSRLR-LSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDG 148
Query: 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 205
GT RLPRL+G S+A++++L + + + E +GL++ VV + + + A +IAA +
Sbjct: 149 GTIRLPRLIGHSRAMDLILTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQ 208
Query: 206 PWIRS 210
+R+
Sbjct: 209 QCVRA 213
>pdb|3ISA|A Chain A, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|B Chain B, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|C Chain C, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|D Chain D, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|E Chain E, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
pdb|3ISA|F Chain F, Crystal Structure Of Putative Enoyl-Coa HydrataseISOMERASE
FROM Bordetella Parapertussis
Length = 254
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NAL+ +V L D + A R+ V +V G G FS GFD ++ GD+ L+ V
Sbjct: 29 NALSAELVEALIDGVD-AAHREQVPLLVFAGAGRNFSAGFDFTDYE-TQSEGDL-LLRMV 85
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFG 145
+E+++ + C R P+ +P L G++ G
Sbjct: 86 RIEMLLQRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVLG-- 143
Query: 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
T+R +VG +A+ ++ +++ ++E ++G +
Sbjct: 144 -TRRFRDIVGADQALSILGSARAFDADEARRIGFV 177
>pdb|1SG4|A Chain A, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|B Chain B, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
pdb|1SG4|C Chain C, Crystal Structure Of Human Mitochondrial Delta3-delta2-
Enoyl-coa Isomerase
Length = 260
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 77/183 (42%), Gaps = 13/183 (7%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVF-- 70
GVA++ NPPVN+L++ + L E+ + + ++LT + G FS G D+
Sbjct: 14 GVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCG 73
Query: 71 -QKVHGAGDVSLMPDVSVELV-VNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA-- 126
H AG + ++ + L NL+ + + C RI A
Sbjct: 74 RSPAHYAGYWKAVQELWLRLYQSNLV------LVSAINGACPAGGCLVALTCDYRILADN 127
Query: 127 PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186
P+ +GL E LG+I F L +G A + L E ++G++D VV
Sbjct: 128 PRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERALQLGLLFPPAEALQVGIVDQVVPE 187
Query: 187 EEL 189
E++
Sbjct: 188 EQV 190
>pdb|3R9T|A Chain A, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|B Chain B, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
pdb|3R9T|C Chain C, Structure Of Echa1_1 From Mycobacterium Paratuberculosis
Atcc Baa-968 K-10
Length = 267
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDI----- 67
V +IT+ P NA+ + G+ D EEA +V+A+VLTG G + F G D+
Sbjct: 19 VMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIAR 78
Query: 68 --NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
N++ H P+ V D KP + +A
Sbjct: 79 RENLYHPDH--------PEWGFAGYVRHFID--KPTIAAVNGTALGGGTELALASDLVVA 128
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ Q GLPE+ G+I GG R+ + A+ ++L + +++ GLI+ VV
Sbjct: 129 DERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVE 188
Query: 186 S 186
+
Sbjct: 189 A 189
>pdb|4HC8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
pdb|4HC8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase Echa3
(Rv0632c, Nysgrc-019494) From Mycobacterium Tuberculosis
H37rv
Length = 255
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 13/219 (5%)
Query: 13 DGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK 72
D +A+I+ + VNAL L + A RDDV A+V+TGNG FSGGFD+ K
Sbjct: 13 DSIAVISXDDGKVNALGPAXQQALNAAIDNA-DRDDVGALVITGNGRVFSGGFDL----K 67
Query: 73 VHGAGDVSLMPDV---SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
+ +G+V D EL L+ K + G H R+AA
Sbjct: 68 ILTSGEVQPAIDXLRGGFELAYRLLSYPKPVVXACTGHAIAXGAFLLSCGDH-RVAAHAY 126
Query: 130 QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL 189
+ E+ +G + + + S + L+K+ E G ID + E +
Sbjct: 127 NIQANEVAIGXTIPYAALEIXKLRLTRSAYQQATGLAKTFFGETALAAGFIDEIALPEVV 186
Query: 190 LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 228
+ + A + A + H KL S ++A ++
Sbjct: 187 VSRAEEAAREFAGLNQ----HAHAATKLRSRADALTAIR 221
>pdb|3SWX|A Chain A, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|B Chain B, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
pdb|3SWX|C Chain C, Crystal Structure Of A Probable Enoyl-Coa
HydrataseISOMERASE FROM Mycobacterium Abscessus
Length = 265
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 81/203 (39%), Gaps = 6/203 (2%)
Query: 7 TMEVGNDGVAIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
T+ + DG ++ +N P NA ++ L E + D++A VL G G F+ G
Sbjct: 10 TLRIRRDGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAG 69
Query: 65 FDI-NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
D+ +V ++ G SL P+ + KP+ +
Sbjct: 70 LDLASVAAEIQGG--ASLTPEGGINPWQVDGRQLSKPLLVAVHGKVLTLGIELALAADIV 127
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
IA E+ G+ P G T R PR G A+ ML + + + E ++G++ +
Sbjct: 128 IADETATFAQLEVNRGIYPFGGATIRFPRTAGWGNAMRWMLTADTFDAVEAHRIGIVQEI 187
Query: 184 VTSEELLKVSRLWALDIAARRKP 206
V E + + A I AR+ P
Sbjct: 188 VPVGEHVDTAIAIAQTI-ARQAP 209
>pdb|3R9S|A Chain A, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|B Chain B, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
pdb|3R9S|C Chain C, Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Avium 104
Length = 267
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 19/181 (10%)
Query: 15 VAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDI----- 67
V +IT+ P NA+ + G+ D EEA +V+A+VLTG G + F G D+
Sbjct: 19 VMVITINRPEARNAVNAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIAR 78
Query: 68 --NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
N++ H P+ V D KP + +A
Sbjct: 79 RENLYHPDH--------PEWGFAGYVRHFID--KPTIAAVNGTALGGGTELALASDLVVA 128
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ Q GLPE+ G+I GG R+ + A+ ++L + +++ GLI+ VV
Sbjct: 129 DERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAMRLLLTGEPLSAAAARDWGLINEVVE 188
Query: 186 S 186
+
Sbjct: 189 A 189
>pdb|3QMJ|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa8_6 From
Mycobacterium Marinum
Length = 256
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 6 VTMEVGNDG-VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSG 63
VT+++ +D V +TL P +NA + +A V ++LTG+G FS
Sbjct: 6 VTLQIDDDNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSA 65
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D+ Q + S ++ + KP+
Sbjct: 66 GTDLAEMQARITDPNFS-EGKFGFRGLIKALAGFPKPLICAVNGLGVGIGATILGYADLA 124
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ +L P +LGV P + LP+LVG A +++ S+ I +EE ++GL+ +
Sbjct: 125 FMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAWLLMSSEWIDAEEALRMGLVWRI 184
Query: 184 VTSEELLKVSRLWALDIAAR 203
+ EELL +R A +AA+
Sbjct: 185 CSPEELLPEARRHAEILAAK 204
>pdb|2VRE|A Chain A, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|B Chain B, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
pdb|2VRE|C Chain C, Crystal Structure Of Human Peroxisomal Delta3,5,
Delta2,4-Dienoyl Coa Isomerase
Length = 296
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 11/157 (7%)
Query: 45 SRD-DVKAIVLTGNGGRFSGGFDI-----NVFQ-KVHGAGDVS-LMPDV--SVELVVNLI 94
SRD D +A+V++G G F+ G D+ ++ Q K +S + D+ + N+I
Sbjct: 71 SRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVI 130
Query: 95 EDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154
E C KP+ C R A + E+ +G+ G QRLP+++
Sbjct: 131 ERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVI 190
Query: 155 GLSKAI-EMMLLSKSITSEEGWKLGLIDAVVTSEELL 190
G + E+ ++ + ++E GL+ V +E++
Sbjct: 191 GNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVM 227
>pdb|1WZ8|A Chain A, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|B Chain B, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|C Chain C, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|D Chain D, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|E Chain E, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
pdb|1WZ8|F Chain F, Crystal Structure Of Probable Enoyl-Coa Dehydratase From
Thermus Thermophilus Hb8
Length = 264
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 83/190 (43%), Gaps = 4/190 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
GV IT +NA+ + GL + + + + V+A++L G GG FS G + +++
Sbjct: 20 GVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFGLIEEM 79
Query: 74 HGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGL 133
+ + L +V + +P+ + + T+L
Sbjct: 80 RASHEALLRVFWEARDLVLGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLD 139
Query: 134 PELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 193
L LGV G P LVG++KA +LL++ +T EE +LGL+ V E++ +
Sbjct: 140 GHLRLGVAAGDHAVLLWPLLVGMAKAKYHLLLNEPLTGEEAERLGLVALAVEDEKVYEK- 198
Query: 194 RLWALDIAAR 203
AL++A R
Sbjct: 199 ---ALEVAER 205
>pdb|3LKE|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
pdb|3LKE|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Bacillus
Halodurans
Length = 263
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
+ C RIA + + +G+ P G + LPR++G + + ++L K TSEE +L
Sbjct: 121 LACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIGYEQTMNLLLEGKLFTSEEALRL 180
Query: 178 GLIDAVVTSEELLK 191
GLI + +++ L+
Sbjct: 181 GLIQEICENKQELQ 194
>pdb|3L3S|A Chain A, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|B Chain B, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|C Chain C, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|D Chain D, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|E Chain E, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|F Chain F, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|G Chain G, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|H Chain H, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|I Chain I, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|J Chain J, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|K Chain K, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
pdb|3L3S|L Chain L, Crystal Structure Of An Enoyl-Coa HydrotaseISOMERASE
FAMILY Protein From Silicibacter Pomeroyi
Length = 263
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 79/213 (37%), Gaps = 21/213 (9%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
EV ++GV +TL P + L+ +A L D A D V +V+ G G F G D+
Sbjct: 11 EVLSEGVLTLTLGRAPAHPLSRAXIAALHDALRRAXGDDHVHVLVIHGPGRIFCAGHDLK 70
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIE----------DCKKPIXXXXXXXXXXXXXXXXM 118
+ H A PD V +L E C KP
Sbjct: 71 EIGR-HRAD-----PDEGRAFVTDLFEACSALXLDLAHCPKPTIALVEGIATAAGLQLXA 124
Query: 119 GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWK 176
C A+P + LP + G GF T + R++G E L + ++
Sbjct: 125 ACDLAYASPAARFCLPGVQNG---GFXTTPAVAVSRVIGRRAVTEXALTGATYDADWALA 181
Query: 177 LGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209
GLI+ ++ L A +AAR + +R
Sbjct: 182 AGLINRILPEAALATHVADLAGALAARNQAPLR 214
>pdb|3F3S|A Chain A, The Crystal Structure Of Human Lambda-Crystallin, Cryl1
pdb|3F3S|B Chain B, The Crystal Structure Of Human Lambda-Crystallin, Cryl1
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 12/248 (4%)
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KA 369
V ++G G++G A V L ++ + + ++ I ++ L G L
Sbjct: 6 VVIVGSGVIGRSWAMLFASGGFQVKLYDIEQQQIRNALENIRKEMKLLEQAGSLKGSLSV 65
Query: 370 NNALKMLKGVLDYSEFKDVDMVI-EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
L ++ G + E + M I E V E + LK+KIF++L+ IL+++TS +
Sbjct: 66 EEQLSLISGCPNIQEAVEGAMHIQECVPEDLELKKKIFAQLDSIIDDRVILSSSTSCLMP 125
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIV---RTERTSAQVILDLMTXXXXXXXXXXX 485
+ + + I AH +P + +PL+E+V T T+ LM
Sbjct: 126 SKLFAGLVHVKQCIVAHPVNPPYYIPLVELVPHPETAPTTVDRTHALMK--KIGQCPMRV 183
Query: 486 XXNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLP-----IGPFQLLDLAGY 540
GF +NR + A LV G+ + S GL IGP + + L
Sbjct: 184 QKEVAGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSEGLGMRYAFIGPLETMHLNAE 243
Query: 541 GVAAATSK 548
G+ + +
Sbjct: 244 GMLSYCDR 251
>pdb|2A7K|A Chain A, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|B Chain B, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|C Chain C, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|D Chain D, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|E Chain E, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|F Chain F, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|G Chain G, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|H Chain H, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A7K|I Chain I, Carboxymethylproline Synthase (carb) From Pectobacterium
Carotovora, Apo Enzyme
pdb|2A81|A Chain A, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|B Chain B, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
pdb|2A81|C Chain C, Carboxymethylproline Synthase (Carb) From Pectobacterium
Carotovora, Complexed With Acetyl Coa And Bicine
Length = 250
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 22/244 (9%)
Query: 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSG 63
+ E +D V +ITL +P N + + +KD A + D V+A+V+ G R FS
Sbjct: 1 MVFEENSDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSA 60
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
G D N +++ + D+ D ++L ++ + KP + R
Sbjct: 61 GGDFNEVKQLSRSEDIEEWIDRVIDLYQAVL-NVNKPTIAAVDGYAIGMGFQFALMFDQR 119
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ A +PEL G+ G L G S E++ +S+ + L++ V
Sbjct: 120 LMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEIIYQCQSLDAPRCVDYRLVNQV 178
Query: 184 VTSEELLKVSRLWALDIA------------ARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231
V S LL + A +A A KP+I L +T +A + + A
Sbjct: 179 VESSALLDAAITQAHVMASYPASAFINTKRAVNKPFIHLLEQT------RDASKAVHKAA 232
Query: 232 LQAK 235
QA+
Sbjct: 233 FQAR 236
>pdb|3HE2|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
pdb|3HE2|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Tuberculosis
Length = 264
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 12/176 (6%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NAL +V L +A +AIVLTG G F G D++ G + PD
Sbjct: 43 NALNSQLVEELTQAIRKAGD-GSARAIVLTGQGTAFCAGADLS------GDAFAADYPDR 95
Query: 86 SVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFG 145
+EL ++ P+ M C R+ AP P G+
Sbjct: 96 LIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNW 154
Query: 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201
+RL LVG +A M+L ++ +T+E G+ + + T L ++ WA +IA
Sbjct: 155 SIRRLSSLVGHGRARAMLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIA 206
>pdb|3OC7|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase From
Mycobacterium Avium
Length = 267
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 13/182 (7%)
Query: 15 VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV 73
VA +TL +P NAL+ +V+ L +A+S V+ +VL GG F G D++ +
Sbjct: 21 VARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLS---EA 77
Query: 74 HGAGDVSLMPDVSVE------LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
G S D++VE ++ I + + P+ C +A P
Sbjct: 78 GSGGSPSSAYDMAVERAREMAALMRAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGP 137
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
++ L E +GV P LP+L + A L + + ++GLI + +E
Sbjct: 138 RSSFALTEARIGVAPAIISLTLLPKLSARAAA-RYYLTGEKFDARRAEEIGLI--TMAAE 194
Query: 188 EL 189
+L
Sbjct: 195 DL 196
>pdb|3R6H|A Chain A, Crystal Structure Of An Enoyl-Coa Hydratase (Echa3) From
Mycobacterium Marinum
Length = 233
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 7/217 (3%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+D + +I + + VN L + L + + A RD+V A+V+ GN FSGGFD+ V
Sbjct: 12 DDAIGVIRMDDGKVNVLGPTMQQALNEAID-AADRDNVGALVIAGNHRVFSGGFDLKVLT 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
+ ++ EL L+ K + G H R+AA +
Sbjct: 71 SGEAKPAIDMLRG-GFELSYRLLSYPKPVVIACTGHAIAMGAFLLCSGDH-RVAAHAYNV 128
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK 191
E+ +G+ + + L + S + L+K+ E G ID + E +L
Sbjct: 129 QANEVAIGMTIPYAAMEVLKLRLTPSAYQQAAGLAKTFFGETALAAGFIDEISLPEVVLS 188
Query: 192 VSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 228
+ A + A + H KL + +EA + ++
Sbjct: 189 RAEEAAREFAGLNQ----QAHNATKLRARAEALKAIR 221
>pdb|1DCI|A Chain A, Dienoyl-Coa Isomerase
pdb|1DCI|B Chain B, Dienoyl-Coa Isomerase
pdb|1DCI|C Chain C, Dienoyl-Coa Isomerase
Length = 275
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 80/194 (41%), Gaps = 21/194 (10%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP-- 83
NA+ L + F++ + D +A+V++G G F+ G D+ + A D+ P
Sbjct: 26 NAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDL-----MDMASDILQPPGD 80
Query: 84 DVS------------VELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQL 131
DV+ + +IE C KP+ C R
Sbjct: 81 DVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFF 140
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAI-EMMLLSKSITSEEGWKLGLIDAVVTSEE-L 189
+ E+ +G+ G QRLP+++G + E+ ++ + ++E GL+ V ++ +
Sbjct: 141 QVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVM 200
Query: 190 LKVSRLWALDIAAR 203
L + A DI+++
Sbjct: 201 LNAAFALAADISSK 214
>pdb|1UIY|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Thermus
Thermophilus Hb8
Length = 253
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 5/198 (2%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
V +E G+ VA++ L +P N L+ L ++ + V+A+VLTG G FS G
Sbjct: 2 VQVEKGH--VAVVFLNDPERRNPLSPEXALSLLQALDDLEADPGVRAVVLTGRGKAFSAG 59
Query: 65 FDINVFQKVHGAG-DVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR 123
D+ ++V G + + +S+ + + + KP + C
Sbjct: 60 ADLAFLERVTELGAEENYRHSLSLXRLFHRVYTYPKPTVAAVNGPAVAGGAGLALACDLV 119
Query: 124 IAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
+ + +LG E+ +G + L R VG A +++L + + + E LGL++ +
Sbjct: 120 VXDEEARLGYTEVKIGFVAALVSVI-LVRAVGEKAAKDLLLTGRLVEAREAKALGLVNRI 178
Query: 184 VTSEELLKVSRLWALDIA 201
+ L+ ++ A ++A
Sbjct: 179 APPGKALEEAKALAEEVA 196
>pdb|3OME|A Chain A, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|B Chain B, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|C Chain C, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|D Chain D, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|E Chain E, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3OME|F Chain F, Crystal Structure Of A Probable Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 282
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 26/203 (12%)
Query: 13 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
D +A ITL P NA ++ L + A ++VK I+L NG FS G D+
Sbjct: 31 DSIATITLNRPEAANAQNPELLDELDAAWTRAAEDNEVKVIILRANGKHFSAGHDLR--- 87
Query: 72 KVHGAGDVSLMPDVSVELVVN-----------LIEDCKKPIXXXXXXXXXXXXXXXXMGC 120
G G+V +S+E ++ + KP C
Sbjct: 88 ---GGGEVP--EKISLEFIIQHEARRYLDYTLRWRNVPKPSIAAVQGRCISGGLLLCWPC 142
Query: 121 HARIAAPKTQLGLPELTLGV--IPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLG 178
+A+ P +G+ + G T L G KA E++ +++T+EE + G
Sbjct: 143 DLILASDDALFSDPVALMGIGGVEYHGHTWEL----GPRKAKEILFTGRALTAEEAERTG 198
Query: 179 LIDAVVTSEELLKVSRLWALDIA 201
+++ VV +EL +R A IA
Sbjct: 199 MVNRVVARDELDAQTRELAEQIA 221
>pdb|3H0U|A Chain A, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|B Chain B, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
pdb|3H0U|C Chain C, Crystal Structure Of A Putative Enoyl-Coa Hydratase From
Streptomyces Avermitilis
Length = 289
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Query: 118 MGCHARIAAPKTQ-LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
+ C R A+ + LG PE+ +G PG G Q L RL+G +A+E +L S ++ +
Sbjct: 123 LACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGRALEAVLTSSDFDADLAER 182
Query: 177 LGLIDAVVTSEEL 189
G ++ V EL
Sbjct: 183 YGWVNRAVPDAEL 195
>pdb|2FBM|A Chain A, Acetyltransferase Domain Of Cdy1
pdb|2FBM|B Chain B, Acetyltransferase Domain Of Cdy1
pdb|2FBM|C Chain C, Acetyltransferase Domain Of Cdy1
Length = 291
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 8/177 (4%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK--VHGAGDVSLMP 83
NAL ++ + + A + DD K ++ + G F G D F K + SL
Sbjct: 46 NALNTEVIKEIVNALNSAAA-DDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEM 104
Query: 84 DVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPG 143
+++ VN KKPI C A K P T G P
Sbjct: 105 VDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPD 164
Query: 144 FGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSEELLKVSRL 195
+ P+++G + A EM++ + +T+ E GL+ V T E ++++ L
Sbjct: 165 GCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKEL 221
>pdb|1EF8|A Chain A, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF8|B Chain B, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF8|C Chain C, Crystal Structure Of Methylmalonyl Coa Decarboxylase
pdb|1EF9|A Chain A, The Crystal Structure Of Methylmalonyl Coa Decarboxylase
Complexed With 2s-Carboxypropyl Coa
Length = 261
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 6/181 (3%)
Query: 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR--FSGGFDINVFQKVHGAGDVSLM 82
+NAL+ + L + +R +++ I+L G FS G DI+ ++ G L
Sbjct: 25 LNALSKVFIDDLMQALSD-LNRPEIRCIILRAPSGSKVFSAGHDIH---ELPSGGRDPLS 80
Query: 83 PDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP 142
D + + +I+ KPI M IAA + + + LGV
Sbjct: 81 YDDPLRQITRMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPY 140
Query: 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 202
G L R G E++ + IT++ +G+++ VV EEL + A I+
Sbjct: 141 NLVGIHNLTRDAGFHIVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISE 200
Query: 203 R 203
+
Sbjct: 201 K 201
>pdb|1XX4|A Chain A, Crystal Structure Of Rat Mitochondrial 3,2-Enoyl-Coa
Length = 261
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 11/190 (5%)
Query: 11 GNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINV 69
G G+A++ NPPVN+L++ + E+ + ++ ++LT G FS G D+
Sbjct: 12 GEAGIAVMKFKNPPVNSLSLEFLTEFVISLEKLENDKSIRGVILTSERPGIFSAGLDLME 71
Query: 70 F---QKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAA 126
H A + ++ + L ++ + + + C RI A
Sbjct: 72 MYGRNPAHYAEYWKAVQELWLRLYLSNL-----TLISAINGASPAGGCLMALTCDYRIMA 126
Query: 127 --PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
K +GL E LG++ F +G A + L E K+GL+D VV
Sbjct: 127 DNSKYTIGLNESLLGIVAPFWLKDNYVNTIGHRAAERALQLGTLFPPAEALKVGLVDEVV 186
Query: 185 TSEELLKVSR 194
+++ +R
Sbjct: 187 PEDQVHSKAR 196
>pdb|3I47|A Chain A, Crystal Structure Of Putative Enoyl Coa HydrataseISOMERASE
(Crotonase) From Legionella Pneumophila Subsp.
Pneumophila Str. Philadelphia 1
Length = 268
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85
NA ++ ++ + + A + +V+ IVL NG FS G D+ Q + + + D
Sbjct: 26 NAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEEENLEDS 85
Query: 86 SVELVVNL---IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP 142
V + NL I KP C IA+ + E+ LG+IP
Sbjct: 86 LV--LGNLMYSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIP 143
Query: 143 GFGGTQRLPRLVGLSKAIEMMLLSKSI-TSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201
+ + R +G +A +M+ +S + + + L L+ V + LL+ + +A I+
Sbjct: 144 AV-ISPYVVRAIG-ERAAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQIS 201
>pdb|2FW2|A Chain A, Catalytic Domain Of Cdy
pdb|2FW2|B Chain B, Catalytic Domain Of Cdy
pdb|2FW2|C Chain C, Catalytic Domain Of Cdy
pdb|2FW2|D Chain D, Catalytic Domain Of Cdy
pdb|2FW2|E Chain E, Catalytic Domain Of Cdy
pdb|2FW2|F Chain F, Catalytic Domain Of Cdy
Length = 260
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 69/178 (38%), Gaps = 10/178 (5%)
Query: 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---VSLM 82
NAL ++ + + A + DD K ++ + G F G D F + H D SL
Sbjct: 27 NALNTEVIKEMVNALNSAAA-DDSKLVLFSAAGSVFCCGLDFGYFVR-HLRNDRNTASLE 84
Query: 83 PDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIP 142
+++ VN KKPI C A K P T G P
Sbjct: 85 MVDTIKNFVNTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSP 144
Query: 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV-----VTSEELLKVSRL 195
+ P+++G + A EM++ + +T+ E GL+ V T E ++++ L
Sbjct: 145 DGCSSITFPKMMGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKEL 202
>pdb|3BPT|A Chain A, Crystal Structure Of Human Beta-Hydroxyisobutyryl-Coa
Hydrolase In Complex With Quercetin
Length = 363
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 11/202 (5%)
Query: 10 VGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFD 66
+G G + +N P +NAL + + + + ++ + I++ G GG+ F G D
Sbjct: 10 LGKKGCTGVITLNRPKFLNALTLNXIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGD 69
Query: 67 INVFQKVHGAGDVSLMPDVSVE--LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARI 124
I V + A + P E + N + C+KP + R+
Sbjct: 70 IRVISEAEKAKQ-KIAPVFFREEYXLNNAVGSCQKPYVALIHGITXGGGVGLSVHGQFRV 128
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
A K PE +G+ P GG LPRL G + L + + ++ G+ V
Sbjct: 129 ATEKCLFAXPETAIGLFPDVGGGYFLPRLQG-KLGYFLALTGFRLKGRDVYRAGIATHFV 187
Query: 185 TSEELLKVSRLWALDIAARRKP 206
SE+L + D+ A + P
Sbjct: 188 DSEKLAXLEE----DLLALKSP 205
>pdb|2VSU|C Chain C, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 275
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSU|A Chain A, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|B Chain B, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism.
pdb|2VSU|D Chain D, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2J5I|I Chain I, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSS|F Chain F, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSU|F Chain F, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPERRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSS|E Chain E, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2J5I|B Chain B, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|C Chain C, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|D Chain D, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|E Chain E, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|F Chain F, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|G Chain G, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|H Chain H, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|J Chain J, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|K Chain K, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2J5I|L Chain L, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
pdb|2VSS|A Chain A, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|B Chain B, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|C Chain C, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
pdb|2VSS|D Chain D, Wild-Type Hydroxycinnamoyl-Coa Hydratase Lyase In Complex
With Acetyl-Coa And Vanillin
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|2VSU|E Chain E, A Ternary Complex Of Hydroxycinnamoyl-Coa Hydratase-Lyase
( Hchl) With Acetyl-Coenzyme A And Vanillin Gives
Insights Into Substrate Specificity And Mechanism
Length = 276
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFAPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINYGIPPGNLVSKAMADTVGHRQSLYYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|4HDT|A Chain A, Crystal Structure Of A Carnitinyl-Coa Dehydratase From
Mycobacterium Thermoresistibile
Length = 353
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 10/187 (5%)
Query: 14 GVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR--FSGGFDINVF 70
GV ++TL P +N+L +V + ++ + D V+A++LTG G R +GG + ++
Sbjct: 18 GVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIY 77
Query: 71 Q--KVHGAGDVSLMPDVSVELVVNL-IEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP 127
K GA D E +N I KP + R+
Sbjct: 78 HSAKADGAEARRFWFD---EYRLNAHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTD 134
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
T++ +PE+ +G IP GGT L R G + L + + +G D V +
Sbjct: 135 TTKMAMPEVGIGFIPDVGGTYLLSRAPG-KLGLHAALTGAPFSGADAIVMGFADHYVPHD 193
Query: 188 ELLKVSR 194
++ + +R
Sbjct: 194 KIDEFTR 200
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 13 DGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
DG+A + L P NA++ + + D E +VLTG G ++ G D+ +
Sbjct: 17 DGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYF 76
Query: 72 KVHGAGDVSLMPDVSVE---LVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPK 128
+ AG L + E L+ KP + C I A +
Sbjct: 77 REVDAGPEILQEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADE 136
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
GL E+ G+ PG ++ + VG +++ ++ K+ ++ ++GL++ V +
Sbjct: 137 ATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGKTFGGQKAAEMGLVNESVPLAQ 196
Query: 189 LLKVS 193
L +V+
Sbjct: 197 LREVT 201
>pdb|3GKB|A Chain A, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|B Chain B, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
pdb|3GKB|C Chain C, Crystal Structure Of A Putative Enoyl-coa Hydratase From
Streptomyces Avermitilis
Length = 287
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 5/194 (2%)
Query: 14 GVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS-GGFDINVFQK 72
GVA I L NPPVN + ++ L+ V+ IV + F D+ + +K
Sbjct: 18 GVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEK 77
Query: 73 VHGAGDV--SLMPDVSV-ELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKT 129
+ ++ S DV+V + V LI + AA +T
Sbjct: 78 MDALQELAASAPADVNVFQAVGELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAET 137
Query: 130 Q-LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
LG E +G+IPG GGTQ L VG ++A+E++L + +E G I+ + ++E
Sbjct: 138 AGLGQIEALMGIIPGGGGTQYLRGRVGRNRALEVVLTADLFDAETAASYGWINRALPADE 197
Query: 189 LLKVSRLWALDIAA 202
L + A +IAA
Sbjct: 198 LDEYVDRVARNIAA 211
>pdb|2F6Q|A Chain A, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|B Chain B, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
pdb|2F6Q|C Chain C, The Crystal Structure Of Human Peroxisomal Delta3, Delta2
Enoyl Coa Isomerase (Peci)
Length = 280
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 59/157 (37%), Gaps = 4/157 (2%)
Query: 42 EATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVEL--VVNLIEDCKK 99
+A S+DD VLTGNG +S G D+ F + G + +V L V D K
Sbjct: 63 KAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFIDFPK 122
Query: 100 PIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159
P+ A A+ + P LG P + P++ +KA
Sbjct: 123 PLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIXSPAKA 182
Query: 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLW 196
E ++ K +T+ E GL+ V K +W
Sbjct: 183 TEXLIFGKKLTAGEACAQGLVTEVFPDSTFQK--EVW 217
>pdb|3ADO|A Chain A, Crystal Structure Of The Rabbit L-Gulonate 3-Dehydrogenase
pdb|3ADP|A Chain A, Crystal Structure Of The Rabbit L-Gulonate 3-Dehydrogenase
(
Length = 319
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 99/241 (41%), Gaps = 10/241 (4%)
Query: 311 VAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KA 369
V ++G GL+G A V L ++ + ++ I ++ L G L A
Sbjct: 9 VLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSA 68
Query: 370 NNALKMLKGVLDYSE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428
L ++ + +E + V + E V E++ LK+KIF++L+ +L++++S +
Sbjct: 69 EEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLP 128
Query: 429 NIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS-AQVILDLMTXXXXXXXXXXXXX 487
+ + + + I AH +P + +PL+E+V TS A V
Sbjct: 129 SKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLK 188
Query: 488 NCTGFAVNRAFFPYSQSARLLVSLGV------DVFRIDSAIRSFGLPIGPFQLLDLAGYG 541
GF +NR + A LV G+ D+ D + IGP + + L G
Sbjct: 189 EIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAF-IGPLETMHLNAEG 247
Query: 542 V 542
+
Sbjct: 248 M 248
>pdb|3MYB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
pdb|3MYB|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Mycobacterium
Smegm
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 76/200 (38%), Gaps = 23/200 (11%)
Query: 1 MAAPRVTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG 59
M+ P + + GV +TL P NAL+ ++A L + F + V+A+VL +G
Sbjct: 22 MSEPLLLQDRDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGK 81
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKK----------PIXXXXXXXX 109
F G D+ + + S E L C P+
Sbjct: 82 AFCAGHDLK-----------EMRAEPSREYYEKLFARCTDVMLAIQRLPAPVIARVHGIA 130
Query: 110 XXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169
C +A + + + +G+ G L R VG A EM++ + +
Sbjct: 131 TAAGCQLVAMCDLAVATRDARFAVSGINVGLFCSTPGVA-LSRNVGRKAAFEMLVTGEFV 189
Query: 170 TSEEGWKLGLIDAVVTSEEL 189
++++ LGL++ VV + L
Sbjct: 190 SADDAKGLGLVNRVVAPKAL 209
>pdb|3OT6|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE
FAMILY PROTEIN From Psudomonas Syringae
Length = 232
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 83/217 (38%), Gaps = 30/217 (13%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
+DGVA +TL N VNA++ ++ ++A D +++TG G SGG+D+ V
Sbjct: 13 DDGVATLTLNNGKVNAISPDVIIAFNAALDQA--EKDRAIVIVTGQPGILSGGYDLKVXT 70
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKK----------PIXXXXXXXXXXXXXXXXMGCH 121
S E +NL+ PI +
Sbjct: 71 S-------------SAEAAINLVAQGSTLARRXLSHPFPIIVACPGHAVAKGAFLLLSAD 117
Query: 122 ARIA-APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
RI A +GL E+ +G G + + S ++ ++ E G +
Sbjct: 118 YRIGVAGPFSIGLNEVQIGXTXHHAGIELARDRLRKSAFNRSVINAEXFDPEGAXAAGFL 177
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL 217
D VV+ EEL + AL +AA+ K + H+ KL
Sbjct: 178 DKVVSVEEL----QGAALAVAAQLKKINXNAHKKTKL 210
>pdb|3FDU|A Chain A, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|B Chain B, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|C Chain C, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|D Chain D, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|E Chain E, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
pdb|3FDU|F Chain F, Crystal Structure Of A Putative Enoyl-Coa
HydrataseISOMERASE FROM Acinetobacter Baumannii
Length = 266
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 90/227 (39%), Gaps = 12/227 (5%)
Query: 17 IITL-INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ-- 71
++TL IN P NAL + + +EA DV+ +VL G F+ G D+ F
Sbjct: 15 VLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGF 74
Query: 72 -KVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQ 130
+ AG +P +++ KP+ + A
Sbjct: 75 VQNPNAGPAGQVPPF---VLLKSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTAL 131
Query: 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---E 187
+P ++LG+ P G +Q L + G KA E++ +K +E + GL++ +V
Sbjct: 132 FQIPFVSLGLSPEGGASQLLVKQAGYHKAAELLFTAKKFNAETALQAGLVNEIVEDAYAT 191
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234
L AL +A+ ++ H D++ + + + R+Q+
Sbjct: 192 AQATAQHLTALPLASLKQTKALMKHDLDQIIECIDHEAEIFMQRVQS 238
>pdb|1RJM|A Chain A, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|B Chain B, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJM|C Chain C, Crystal Structure Of Menb (rv0548c) From Mycobacterium
Tuberculosis
pdb|1RJN|A Chain A, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|B Chain B, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
pdb|1RJN|C Chain C, The Crystal Structure Of Menb (Rv0548c) From Mycobacterium
Tuberculosis In Complex With The Coa Portion Of
Naphthoyl Coa
Length = 339
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 18/210 (8%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-------GRFSG 63
+D + P V NA V L + A DV ++LTGNG F
Sbjct: 69 DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCS 128
Query: 64 GFDINVFQKV---HGAGDVSLMPDVS------VELVVNLIEDCKKPIXXXXXXXXXXXXX 114
G D + + + +GD + DV+ + V LI K +
Sbjct: 129 GGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGH 188
Query: 115 XXXMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEE 173
+ C +A+ + + + +G G G+ L R VG A E+ L ++ T+E+
Sbjct: 189 SLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQ 248
Query: 174 GWKLGLIDAVVTSEELLKVSRLWALDIAAR 203
++G ++AV EL V WA +I A+
Sbjct: 249 MHQMGAVNAVAEHAELETVGLQWAAEINAK 278
>pdb|3T8A|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8A|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Substrate Analogue, Osb-Ncoa
pdb|3T8B|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
pdb|3T8B|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb With
Altered Hexameric Assembly
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 18/210 (8%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-------GRFSG 63
+D + P V NA V L + A DV ++LTGNG F
Sbjct: 64 DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCS 123
Query: 64 GFDINVFQKV---HGAGDVSLMPDVS------VELVVNLIEDCKKPIXXXXXXXXXXXXX 114
G D + + + +GD + DV+ + V LI K +
Sbjct: 124 GGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGH 183
Query: 115 XXXMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEE 173
+ C +A+ + + + +G G G+ L R VG A E+ L ++ T+E+
Sbjct: 184 SLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQ 243
Query: 174 GWKLGLIDAVVTSEELLKVSRLWALDIAAR 203
++G ++AV EL V WA +I A+
Sbjct: 244 MHQMGAVNAVAEHAELETVGLQWAAEINAK 273
>pdb|1Q51|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q51|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb In
Complex With Acetoacetyl-Coenzyme A, A Key Enzyme In
Vitamin K2 Biosynthesis
pdb|1Q52|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|C Chain C, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|D Chain D, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|E Chain E, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|F Chain F, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|G Chain G, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|H Chain H, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|I Chain I, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|J Chain J, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|K Chain K, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
pdb|1Q52|L Chain L, Crystal Structure Of Mycobacterium Tuberculosis Menb, A
Key Enzyme In Vitamin K2 Biosynthesis
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 18/210 (8%)
Query: 12 NDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-------GRFSG 63
+D + P V NA V L + A DV ++LTGNG F
Sbjct: 44 DDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCS 103
Query: 64 GFDINVFQKV---HGAGDVSLMPDVS------VELVVNLIEDCKKPIXXXXXXXXXXXXX 114
G D + + + +GD + DV+ + V LI K +
Sbjct: 104 GGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGH 163
Query: 115 XXXMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEE 173
+ C +A+ + + + +G G G+ L R VG A E+ L ++ T+E+
Sbjct: 164 SLHVVCDLTLASREYARFKQTDADVGSFDGGYGSAYLARQVGQKFAREIFFLGRTYTAEQ 223
Query: 174 GWKLGLIDAVVTSEELLKVSRLWALDIAAR 203
++G ++AV EL V WA +I A+
Sbjct: 224 MHQMGAVNAVAEHAELETVGLQWAAEINAK 253
>pdb|4J2U|A Chain A, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
pdb|4J2U|B Chain B, Crystal Structure Of An Enoyl-coa Hydratase From
Rhodobacter Sphaeroides 2.4.1
Length = 365
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 59/144 (40%), Gaps = 8/144 (5%)
Query: 18 ITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHG 75
ITL P +NAL V + +V+ +V+ G R F G DI
Sbjct: 37 ITLSRPAALNALTCAXVQEIDAALRGWIGDPEVELVVIDAEGPRAFCAGGDIAELHGRGV 96
Query: 76 AGDVSLMPDV-SVELVVN-LIEDCKKPIXXXXXXXXXXXXXXXXMGCHAR--IAAPKTQL 131
AGD + D VE N I KPI +GCHAR I +Q+
Sbjct: 97 AGDHAFGQDFWRVEYRXNDRIAAFPKPIVSLXQGFTXGGGVG--LGCHARHRIVGETSQI 154
Query: 132 GLPELTLGVIPGFGGTQRLPRLVG 155
PE +G++P GGT L R G
Sbjct: 155 SXPECAIGLVPDVGGTHLLARAPG 178
>pdb|3T3W|A Chain A, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|B Chain B, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|C Chain C, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|D Chain D, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|E Chain E, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
pdb|3T3W|F Chain F, Crystal Structure Of Probable Enoyl-Coa Hydratase From
Mycobacterium Thermoresistibile
Length = 279
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 83/205 (40%), Gaps = 28/205 (13%)
Query: 12 NDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF 70
+D +A ITL P NA ++ L + A +DV IVL NG FS G D+
Sbjct: 27 SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLR-- 84
Query: 71 QKVHGAGDVSLMPD-VSVELVV-----NLIE------DCKKPIXXXXXXXXXXXXXXXXM 118
G G V PD +++E + +E + KP
Sbjct: 85 ----GGGPV---PDKLTLEFIYAHESRRYLEYSLRWRNVPKPSIAAVQGRCISGGLLLCW 137
Query: 119 GCHARIAAPKTQLGLPE--LTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
C IAA P + +G + G T L G KA E++ +++T+EE +
Sbjct: 138 PCDLIIAAEDALFSDPVVLMDIGGVEYHGHTWEL----GPRKAKEILFTGRAMTAEEVAQ 193
Query: 177 LGLIDAVVTSEELLKVSRLWALDIA 201
G+++ VV + L +R A +IA
Sbjct: 194 TGMVNRVVPRDRLDAETRALAGEIA 218
>pdb|3TLF|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3TLF|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 274
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 18/198 (9%)
Query: 7 TMEVGNDG-VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
T++ DG A ITL P +NAL+ ++ L+ + EA + D V +V+TG G F G
Sbjct: 12 TIKYEVDGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSG 71
Query: 65 FDIN--------VFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXX 115
D+ ++++ + D P + KP+
Sbjct: 72 ADVKEIPEDGKVIYERPYLSTYDQWEAPQEGTPPFRTM----AKPVLTAVNGICCGAGMD 127
Query: 116 XXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKS--ITSEE 173
IA+ + P +++G++ G R+ R++ S A+ M L+ K ++++
Sbjct: 128 WVTTTDIVIASEQATFFDPHVSIGLVAG-RELVRVSRVLPRSIALRMALMGKHERMSAQR 186
Query: 174 GWKLGLIDAVVTSEELLK 191
++LGLI +V + LL+
Sbjct: 187 AYELGLISEIVEHDRLLE 204
>pdb|2GTR|A Chain A, Human Chromodomain Y-Like Protein
pdb|2GTR|B Chain B, Human Chromodomain Y-Like Protein
pdb|2GTR|C Chain C, Human Chromodomain Y-Like Protein
Length = 261
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 58/156 (37%), Gaps = 7/156 (4%)
Query: 47 DDVKAIVLTGNGGRFSGGFDINVFQK--VHGAGDVSLMPDVSVELVVNLIEDCKKPIXXX 104
DD K ++L+ G F G D F + S ++ VN KKPI
Sbjct: 48 DDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNTFIQFKKPIIVA 107
Query: 105 XXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164
C A K P T G P T P+++G + A EM+L
Sbjct: 108 VNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLL 167
Query: 165 LSKSITSEEGWKLGLIDAV-----VTSEELLKVSRL 195
+ +T++E GL+ V T E ++++ L
Sbjct: 168 SGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKEL 203
>pdb|3M6M|A Chain A, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|B Chain B, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6M|C Chain C, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
pdb|3M6N|A Chain A, Crystal Structure Of Rpff
pdb|3M6N|B Chain B, Crystal Structure Of Rpff
pdb|3M6N|C Chain C, Crystal Structure Of Rpff
Length = 305
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 118 MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
+ CH IA +GLPE+ + PG G + + + A ++ML ++E+ +
Sbjct: 160 LSCHTIIAEEGVMMGLPEVLFDLFPGMGAYSFMCQRISAHLAQKIMLEGNLYSAEQLLGM 219
Query: 178 GLIDAVV 184
GL+D VV
Sbjct: 220 GLVDRVV 226
>pdb|3RRV|A Chain A, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|B Chain B, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|C Chain C, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|D Chain D, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|E Chain E, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
pdb|3RRV|F Chain F, Crystal Structure Of An Enoyl-Coa HydrataseISOMERASE FROM
Mycobacterium Paratuberculosis
Length = 276
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 68/178 (38%), Gaps = 2/178 (1%)
Query: 8 MEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
++V DG I +N P +N++ + GL ++ T +A V+TG G FS G
Sbjct: 30 IDVRADGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGG 89
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXXXXXXXXXXXXXXMGCHARIA 125
D +++ D+ +V + C+ P+
Sbjct: 90 DFGYLKELSADADLRAKTIRDGREIVLGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYI 149
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAV 183
A L P + +G++ GG P + L A E L I+++ +LGL + V
Sbjct: 150 AENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKEYALTGTRISAQRAVELGLANHV 207
>pdb|2Q35|A Chain A, Crystal Structure Of The Y82f Variant Of Ech2
Decarboxylase Domain Of Curf From Lyngbya Majuscula
Length = 243
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+GN V I N + IV GL+ F K ++LTG G FS G
Sbjct: 8 ELGNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKE 67
Query: 69 -VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPI 101
+ +K G +V V + LI DC+ PI
Sbjct: 68 FLIRKTRG--------EVEVLDLSGLILDCEIPI 93
>pdb|2Q2X|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula
pdb|2Q34|A Chain A, Crystal Structure Of The Ech2 Decarboxylase Domain Of Curf
From Lyngbya Majuscula, Rhombohedral Crystal Form
Length = 243
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+GN V I N + IV GL+ F K ++LTG G FS G
Sbjct: 8 ELGNGVVQITXKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKE 67
Query: 69 -VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPI 101
+ +K G +V V + LI DC+ PI
Sbjct: 68 YLIRKTRG--------EVEVLDLSGLILDCEIPI 93
>pdb|2J5G|D Chain D, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
Length = 263
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
+P L G++PG G P +GL + + + +T+++ ++L ++ V+ +L++
Sbjct: 152 MPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLME- 210
Query: 193 SRLWALDIAARRKP 206
R W + ++P
Sbjct: 211 -RAWEIARTLAKQP 223
>pdb|2J5G|A Chain A, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|B Chain B, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|C Chain C, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|E Chain E, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|F Chain F, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|G Chain G, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|H Chain H, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|I Chain I, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|J Chain J, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|K Chain K, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5G|L Chain L, The Native Structure Of A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120
pdb|2J5S|A Chain A, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
pdb|2J5S|B Chain B, Structural Of Abdh, A Beta-Diketone Hydrolase From The
Cyanobacterium Anabaena Sp. Pcc 7120 Bound To (S)-3-
Oxocyclohexyl Acetic Acid
Length = 263
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 133 LPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKV 192
+P L G++PG G P +GL + + + +T+++ ++L ++ V+ +L++
Sbjct: 152 MPHLNAGIVPGDGVHILWPLALGLYRGRYFLFTQEKLTAQQAYELNVVHEVLPQSKLME- 210
Query: 193 SRLWALDIAARRKP 206
R W + ++P
Sbjct: 211 -RAWEIARTLAKQP 223
>pdb|3QXI|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
pdb|3QXI|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase Echa1 From
Mycobacterium Marinum
Length = 265
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 88/228 (38%), Gaps = 46/228 (20%)
Query: 4 PRVTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
P V +E D + IIT+ P N++ + L D + + + +LTG GG F
Sbjct: 15 PEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFC 73
Query: 63 GGFDINVFQK-----VHGAGDVSLMPDVSVELVVNLIE-DCKKPIXXXXXXXXXXXXXXX 116
G D+ F + V G G + E KP+
Sbjct: 74 AGMDLKAFARGENVVVEGRG-------------LGFTERPPAKPLIAAVEGYALAGGTEL 120
Query: 117 XMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176
+ +AA + G+PE+ G++ G GG RLP + + A+E+ L ++++E
Sbjct: 121 ALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAMELALTGDNLSAERAHA 180
Query: 177 LGLID-------------------------AVVTSEELLKVSRLWALD 199
LG+++ AV ++ ++ SR W+LD
Sbjct: 181 LGMVNVLAEPGAALDAAIALAEKITANGPLAVAATKRIITESRGWSLD 228
>pdb|3LAO|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
pdb|3LAO|C Chain C, Crystal Structure Of Enoyl-Coa Hydratase From Pseudomonas
Aeruginosa Pa01
Length = 258
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Query: 47 DDVKAIVLTGNGGRFSGGFDI-NVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIXXXX 105
++ + VL +G F+ G D+ + K+ +G PD V+ + KP+
Sbjct: 55 EESRCAVLFAHGEHFTAGLDLXELAPKLAASG--FRYPDGGVDPWGVVQPRRSKPLVVAV 112
Query: 106 XXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLL 165
+ +AA T+ E+ G+ P G T R PR G + A +L
Sbjct: 113 QGTCWTAGIELXLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDAXRYILT 172
Query: 166 SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201
++E + L+ VV E L + +A IA
Sbjct: 173 GDEFDADEALRXRLLTEVVEPGEELARALEYAERIA 208
>pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
pdb|3Q7J|B Chain B, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human
Aminopeptidase N (Apn) As A Target For Anticancer Drug
Development
Length = 780
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 319 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378
M S IATA+ L + LK + ++ + + E VR + GKL K+N L + G
Sbjct: 621 MRSSIATAYAL--VTGDLKGLLEKF--RSVDRDEDRVRIISAFGKL---KSNTDLSTVYG 673
Query: 379 VLDYSEFKDVDMV--IEAVIESVPLKQKIFSELEK 411
+++ +E K DM+ + +E++P ++ IF+ L++
Sbjct: 674 MVEKTEIKKQDMISFFSSALETLPGREFIFANLDR 708
>pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3
From Thermoplasma Acidophilum, A Zinc Aminopeptidase In
Three Different Conformations
pdb|1Z5H|A Chain A, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
pdb|1Z5H|B Chain B, Crystal Structures Of The Tricorn Interacting Factor F3
From Thermoplasma Acidophilum
Length = 780
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Query: 319 MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378
M S IATA+ L + LK + ++ + + E VR + GKL K+N L + G
Sbjct: 621 MRSSIATAYAL--VTGDLKGLLEKF--RSVDRDEDRVRIISAFGKL---KSNTDLSTVYG 673
Query: 379 VLDYSEFKDVDMV--IEAVIESVPLKQKIFSELEK 411
+++ +E K DM+ + +E++P ++ IF+ L++
Sbjct: 674 MVEKTEIKKQDMISFFSSALETLPGREFIFANLDR 708
>pdb|3HL2|A Chain A, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
pdb|3HL2|B Chain B, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
pdb|3HL2|C Chain C, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
pdb|3HL2|D Chain D, The Crystal Structure Of The Human Sepsecs-Trnasec Complex
Length = 501
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRS----FGLPIGPFQLLDLAGYGVAAATSKE 549
VN A+ S L+ G V RID+ ++S F +P+G +AG+ + +E
Sbjct: 251 VNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGG---AIIAGFN--DSFIQE 305
Query: 550 FDKAFPDRSFQSPLVDL---LLKSGRNG 574
K +P R+ SP +D+ LL G NG
Sbjct: 306 ISKMYPGRASASPSLDVLITLLSLGSNG 333
>pdb|3NJB|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJB|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis, Iodide Soak
pdb|3NJD|A Chain A, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
pdb|3NJD|B Chain B, Crystal Structure Of Enoyl-Coa Hydratase From
Mycobacterium Smegmatis
Length = 333
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 70/204 (34%), Gaps = 35/204 (17%)
Query: 6 VTMEVGNDGVAIITLINPPV-NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+T EV D VA IT P NA+ L E A DV I+++G G F G
Sbjct: 37 MTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAG 95
Query: 65 FDINVF----------------------QKVHGAGDVSLMPDVSVELVVNLIE------D 96
FD++ + Q ++ D P V +++ +
Sbjct: 96 FDLSAYAEGSSSAGGGSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGFASLMH 155
Query: 97 CKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFG-GTQRLPRLVG 155
C KP + IAA ++G P + + +P G RL G
Sbjct: 156 CDKPTVVKIHGYCVAGGTDIALHADQVIAAADAKIGYPPMRVWGVPAAGLWAHRL----G 211
Query: 156 LSKAIEMMLLSKSITSEEGWKLGL 179
+A ++ IT + + GL
Sbjct: 212 DQRAKRLLFTGDCITGAQAAEWGL 235
>pdb|2W3P|A Chain A, Boxc Crystal Structure
pdb|2W3P|B Chain B, Boxc Crystal Structure
Length = 556
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 22/163 (13%)
Query: 129 TQLGLPELTL-GVIPGFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
+ + LPE+ L GV+PG GG R+ R V +A + + + E L+D VV
Sbjct: 162 SSVSLPEVPLLGVLPGTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVK 221
Query: 186 SEELLKVSRLWALDIAARRK--------PWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237
+ + + AL++AA+ P R + RTD+ L+ + L + +AK+
Sbjct: 222 PNQFDQAIQARALELAAQSDRPAHAQGVPLTR-IERTDREDGLT--YKTLDVTIDRAKRI 278
Query: 238 A---PNMPQHQ--ACLDVIEEGIVHGGYSGVLKEAKVFKELVM 275
A PQ + A +D I + G LK A+ F + ++
Sbjct: 279 ATFTAKAPQTEPPASIDAI---VAAGANWWPLKFAREFDDAIL 318
>pdb|3UL5|A Chain A, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL5|B Chain B, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL5|C Chain C, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL5|D Chain D, Saccharum Officinarum Canecystatin-1 In Space Group C2221
pdb|3UL6|A Chain A, Saccharum Officinarum Canecystatin-1 In Space Group P6422
pdb|3UL6|B Chain B, Saccharum Officinarum Canecystatin-1 In Space Group P6422
Length = 139
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAH 327
GL PRG ++ GG MG G+A AH
Sbjct: 13 GLVPRGSHMASMTGGQQMGRGMAEAH 38
>pdb|3BC8|A Chain A, Crystal Structure Of Mouse Selenocysteine Synthase
pdb|3BCA|A Chain A, Crystal Structure Of Mouse Selenocysteine Synthase, Sodium
Iodide Soak
pdb|3BCB|A Chain A, Crystal Structure Of Mouse Selenocysteine Synthase, Sodium
Phosphate Soak
Length = 450
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 9/79 (11%)
Query: 494 VNRAFFPYSQSARLLVSLGVDVFRIDSAIRS----FGLPIGPFQLLDLAGYGVAAATSKE 549
VN A+ S L+ G V RID+ ++S F +P+G +AG+ ++
Sbjct: 233 VNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDXNFMVPVGG---AIIAGFN--EPFIQD 287
Query: 550 FDKAFPDRSFQSPLVDLLL 568
K +P R+ SP +D+L+
Sbjct: 288 ISKMYPGRASASPSLDVLI 306
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,564,888
Number of Sequences: 62578
Number of extensions: 799683
Number of successful extensions: 2690
Number of sequences better than 100.0: 139
Number of HSP's better than 100.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2449
Number of HSP's gapped (non-prelim): 160
length of query: 725
length of database: 14,973,337
effective HSP length: 106
effective length of query: 619
effective length of database: 8,340,069
effective search space: 5162502711
effective search space used: 5162502711
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)