BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004891
(725 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPI6|AIM1_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1
OS=Arabidopsis thaliana GN=AIM1 PE=1 SV=1
Length = 721
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/720 (74%), Positives = 632/720 (87%), Gaps = 5/720 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
VTMEVGNDGVA+IT+ NPPVN+LA PI++GLK+KF +A R+DVKAIVL GN GRFSGGF
Sbjct: 7 VTMEVGNDGVAVITISNPPVNSLASPIISGLKEKFRDANQRNDVKAIVLIGNNGRFSGGF 66
Query: 66 DINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIA 125
DINVFQ+VH GD+SLMP+VSVELV NL+ED +KP+VAAVEGLALGGGLELAM CHAR+A
Sbjct: 67 DINVFQQVHKTGDLSLMPEVSVELVCNLMEDSRKPVVAAVEGLALGGGLELAMACHARVA 126
Query: 126 APKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185
APK QLGLPELTLGVIPGFGGTQRLPRLVGL+KA +M+LLSKSI+SEEG KLGLIDA+V
Sbjct: 127 APKAQLGLPELTLGVIPGFGGTQRLPRLVGLAKATDMILLSKSISSEEGHKLGLIDALVP 186
Query: 186 SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245
++L SR WALDIA RKP+++SLHRTDK+GSLSEAR +LK +R AKK APNMPQH
Sbjct: 187 PGDVLSTSRKWALDIAEGRKPFLQSLHRTDKIGSLSEARAILKNSRQLAKKIAPNMPQHH 246
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
AC++VIEEGI+HGGYSGVLKEA+VFK+LV+ DT++GLVHVFFAQRATSKVPNVTD+GLKP
Sbjct: 247 ACIEVIEEGIIHGGYSGVLKEAEVFKQLVLSDTAKGLVHVFFAQRATSKVPNVTDVGLKP 306
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
R ++KVAVIGGGLMGSGIATA +L+NI VVLKE+NSE+L+KGIK++EAN++ LV+RGKLT
Sbjct: 307 RPIKKVAVIGGGLMGSGIATALLLSNIRVVLKEINSEFLMKGIKSVEANMKSLVSRGKLT 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
QDKA AL + KGVLDY+EF DVDMVIEAVIE++ LKQ IF E+EK C PHCILA+NTST
Sbjct: 367 QDKAGKALSLFKGVLDYTEFNDVDMVIEAVIENIQLKQNIFKEIEKVCSPHCILASNTST 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
IDL+++GEKT+S+DRI+GAHFFSPAH+MPLLEIVR++ TSAQVILDLM VGK IKKVPVV
Sbjct: 427 IDLDVIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILDLMAVGKAIKKVPVV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
VGNC GFAVNR FFPYSQ+A +L +LGVD+FRIDS I SFGLP+GPFQL DLAG+G+ A
Sbjct: 487 VGNCIGFAVNRTFFPYSQAAHMLANLGVDLFRIDSVITSFGLPLGPFQLGDLAGHGIGLA 546
Query: 546 TSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRR 605
+ K + DR F+SP+ +LLLKSGRNGK NG+G Y YEKGSKPKPDPSVL I+E+ R+
Sbjct: 547 VGPIYAKVYGDRMFRSPMTELLLKSGRNGKINGRGYYIYEKGSKPKPDPSVLSIVEKSRK 606
Query: 606 LSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYR 665
L+NIMPGGK PISVT+KEIVEMILFPVVNE+CRVL+EG+V+RASDLD ASVLGMSFPSYR
Sbjct: 607 LTNIMPGGK-PISVTDKEIVEMILFPVVNEACRVLDEGVVIRASDLDIASVLGMSFPSYR 665
Query: 666 GGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRARL 725
GGIVFWAD VG Y+Y LKK S+ YG+FFKPSR+LEERA G+ L S S +SR++L
Sbjct: 666 GGIVFWADTVGPKYIYERLKKLSETYGSFFKPSRYLEERAMNGMLL----SESKSSRSKL 721
>sp|Q8W1L6|MFP_ORYSJ Peroxisomal fatty acid beta-oxidation multifunctional protein
OS=Oryza sativa subsp. japonica GN=MFP PE=1 SV=2
Length = 726
Score = 1039 bits (2687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/724 (69%), Positives = 611/724 (84%), Gaps = 2/724 (0%)
Query: 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFS 62
A RVTMEVG DGVA++T+ NPPVNAL I+ GLK+K+ EA RDDVKAIVLTG GG+F
Sbjct: 4 AIRVTMEVGADGVAVVTICNPPVNALHPIIIQGLKEKYAEAMDRDDVKAIVLTGAGGKFC 63
Query: 63 GGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHA 122
GGFDINVF +VH G+VSLMPDVSVELV NL+E KKP VAA++GLALGGGLEL MGCHA
Sbjct: 64 GGFDINVFTEVHKTGNVSLMPDVSVELVSNLMEAGKKPSVAAIQGLALGGGLELTMGCHA 123
Query: 123 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
RI+ P+ QLGLPELTLG+IPGFGGTQRLPRLVGL KAIEMML SK IT++EG + GL+DA
Sbjct: 124 RISTPEAQLGLPELTLGIIPGFGGTQRLPRLVGLPKAIEMMLQSKFITAKEGKEGGLVDA 183
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242
+ + +EL+K+SRLWAL+IA RKPWIRSL RTD+LGSLSEAR VL AR QAKK A N+P
Sbjct: 184 LCSPDELIKMSRLWALEIANYRKPWIRSLARTDRLGSLSEARSVLNSARQQAKKVAANLP 243
Query: 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIG 302
QHQACLDV+EEG++ GG++GVLKEAKVFKELV+ TS+ LVH FFAQR T+KVP VTD+
Sbjct: 244 QHQACLDVMEEGVLCGGHAGVLKEAKVFKELVLSPTSKALVHAFFAQRLTTKVPGVTDVQ 303
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
LKPR +RKVAVIGGGLMGSGIATA +++N VVLKEVN ++L +G K I AN+ GLV RG
Sbjct: 304 LKPRKIRKVAVIGGGLMGSGIATALLVSNTSVVLKEVNPQFLQRGQKMIAANLEGLVKRG 363
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
LT+DK N A+ +LKG LDYS+FKDVDMVIEAVIE +PLKQ IFS+LEK CPPHCILATN
Sbjct: 364 SLTKDKMNKAMSLLKGALDYSDFKDVDMVIEAVIEKIPLKQSIFSDLEKVCPPHCILATN 423
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TSTIDLN+VGEKT+SQDRIIGAHFFSPAH+MPLLEIVRTE+TS Q ILDL+TVGK+IKKV
Sbjct: 424 TSTIDLNVVGEKTNSQDRIIGAHFFSPAHIMPLLEIVRTEKTSPQAILDLITVGKMIKKV 483
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 542
PVVVGNCTGFAVNR FFPY+Q + LLVS+G+DVFRID I SFG+P+GPFQL DLAGYGV
Sbjct: 484 PVVVGNCTGFAVNRTFFPYTQGSHLLVSIGIDVFRIDRVISSFGMPMGPFQLQDLAGYGV 543
Query: 543 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEE 602
A A + AF R+ S LVDL++++GR GK+NGKG Y YEKG KPKPDPSV +I+E
Sbjct: 544 ALAVKDIYAAAFGTRNLDSNLVDLMVQNGRQGKSNGKGYYLYEKGGKPKPDPSVQVVIDE 603
Query: 603 CRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFP 662
RR + MPGGK P+++++++I+EMI FPVVNE+CRV++E +V+RASDLD AS+LGM FP
Sbjct: 604 YRRCAKTMPGGK-PVTLSDQDILEMIFFPVVNEACRVMDENVVIRASDLDIASILGMGFP 662
Query: 663 SYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP-VSSSSTS 721
+RGG+VFWAD +GA Y+++ L KW+++YG+FFKPS +LE+RA + +PLSAP + ++S
Sbjct: 663 KFRGGLVFWADTIGAPYIHSKLSKWTEIYGDFFKPSSYLEDRAKRSLPLSAPNATQQASS 722
Query: 722 RARL 725
R+R+
Sbjct: 723 RSRM 726
>sp|Q39659|MFPA_CUCSA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Cucumis sativus PE=1 SV=1
Length = 725
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/714 (59%), Positives = 552/714 (77%), Gaps = 2/714 (0%)
Query: 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF 61
A R MEVG DGVAIIT+INPPVN+L+ ++ L+D +E+A RDDVKAIV+TG G+F
Sbjct: 5 AKGRTVMEVGTDGVAIITIINPPVNSLSFDVLFSLRDSYEQALRRDDVKAIVVTGAKGKF 64
Query: 62 SGGFDINVFQKVHGA-GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGC 120
SGGFDI F + G G+ + ++S+E++ ++ E +KP VAA++GLALGGGLE+AM C
Sbjct: 65 SGGFDITAFGVLQGGKGEQPNVRNISIEMITDIFEAARKPAVAAIDGLALGGGLEVAMAC 124
Query: 121 HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLI 180
HARI+ P QLGLPEL LG+IPGFGGTQRLPRLVGLSKA+EMML SK I +E LGL+
Sbjct: 125 HARISTPTAQLGLPELQLGIIPGFGGTQRLPRLVGLSKALEMMLTSKPIKGQEAHSLGLV 184
Query: 181 DAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240
DA+V EEL+ +R WAL+I RR+PW+ SLHRTDKL SL+EAR++ LAR QAKK PN
Sbjct: 185 DAIVPPEELINTARRWALEILERRRPWVHSLHRTDKLESLAEARKIFNLARAQAKKQYPN 244
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
+ AC+D +E G+V G +G+ KEA+ F+ L+ DT + L+H+FFAQR+T+KVP VTD
Sbjct: 245 LKHTIACIDAVETGVVSGPRAGLWKEAEEFQGLLHSDTCKSLIHIFFAQRSTTKVPGVTD 304
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT 360
+GL PR ++KVA++GGGLMGSGIATA IL+N +VVLKEVN ++L GI + AN++ V
Sbjct: 305 LGLVPRQIKKVAIVGGGLMGSGIATALILSNYHVVLKEVNDKFLQAGIDRVRANLQSRVK 364
Query: 361 RGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420
+G +T +K ++ +LKGVL+Y FKDVDMVIEAVIE+V LKQ+IFS+LEK CPPHC+LA
Sbjct: 365 KGNMTNEKFEKSISLLKGVLNYESFKDVDMVIEAVIENVSLKQQIFSDLEKYCPPHCMLA 424
Query: 421 TNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIK 480
TNTSTIDL ++GE+ S+DRIIGAHFFSPAH+MPLLEIVRT+ T+AQVI+DL+ VGK IK
Sbjct: 425 TNTSTIDLELIGERIKSRDRIIGAHFFSPAHIMPLLEIVRTKHTAAQVIVDLLDVGKNIK 484
Query: 481 KVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGY 540
K PVVVGNCTGFAVNR FFPYSQ+A LL GVD ++ID AI FG+P+GPF+L DL G+
Sbjct: 485 KTPVVVGNCTGFAVNRMFFPYSQAAILLAEHGVDPYQIDRAISKFGMPMGPFRLCDLVGF 544
Query: 541 GVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPII 600
GVAAAT+ +F +AFP+R+++S L+ L+ + G++ KG Y Y+K K P+P + I
Sbjct: 545 GVAAATASQFVQAFPERTYKSMLIPLMQEDKNAGESTRKGFYVYDKNRKAGPNPELKKYI 604
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
E+ R S + K+ + EK+IVEMI FPVVNE+CRVL EGI V+A+DLD A V+GM
Sbjct: 605 EKARNSSGVSVDPKL-TKLPEKDIVEMIFFPVVNEACRVLAEGIAVKAADLDIAGVMGMG 663
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAP 714
FPSYRGG++FWAD++G+NY+Y+ L++WS+ YG FFKP +L ERA +G LSAP
Sbjct: 664 FPSYRGGLMFWADSLGSNYIYSRLEEWSKQYGGFFKPCGYLAERAVQGATLSAP 717
>sp|O49809|MFPA_BRANA Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a
OS=Brassica napus PE=2 SV=2
Length = 725
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/721 (59%), Positives = 551/721 (76%), Gaps = 5/721 (0%)
Query: 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGF 65
T+EVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG G+FSGGF
Sbjct: 9 TTIEVGADGVAVITLINPPVNSLSFDVLYSLKSNYEEALSRNDVKAIVVTGAKGKFSGGF 68
Query: 66 DINVFQKVH-GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DI+ F ++ G + +S++++ +L+E KKP VAA++GLALGGGLEL+M CHARI
Sbjct: 69 DISGFGEIQKGTMKEPKVGYISIDILTDLLEAAKKPSVAAIDGLALGGGLELSMACHARI 128
Query: 125 AAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV 184
+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLIDAVV
Sbjct: 129 SAPGAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLIDAVV 188
Query: 185 TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
ELL +R WALDIA RRKPW+ S+ +TDKL L EARE+LK A+ Q ++ APNM
Sbjct: 189 PPAELLNAARRWALDIAERRKPWVSSVLKTDKLPPLGEAREILKFAKDQTRRQAPNMKHP 248
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
CL+ +E GIV G +G+ KEA+V E++ LDT++GL+HVFF+QR T+KVP VTD GL
Sbjct: 249 LMCLEAVEVGIVSGSRAGLEKEAQVGSEVINLDTTKGLIHVFFSQRGTTKVPGVTDRGLV 308
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
PR + KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +GK+
Sbjct: 309 PRKINKVAIIGGGLMGSGIATALILSNYSVILKEVNEKFLEAGIGRVKANLQSRVKKGKM 368
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
+++K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+NTS
Sbjct: 369 SKEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTS 428
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
TIDLN +GE+T SQDRIIGAHFFSPAHVMPLLEIVRT TSAQVI+DL+ VGK I+K PV
Sbjct: 429 TIDLNKIGERTKSQDRIIGAHFFSPAHVMPLLEIVRTNHTSAQVIVDLLDVGKKIRKTPV 488
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAA 544
VVGNCTGFAVNR FFPY+Q+A LV G D + ID A+ FG+P+GPF+L DL G+GVA
Sbjct: 489 VVGNCTGFAVNRMFFPYTQAAMFLVEHGTDPYLIDKAVSKFGMPMGPFRLCDLVGFGVAI 548
Query: 545 ATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECR 604
AT+ +F + FP+R+++S ++ L+ + R G+A KG Y Y+ K KPDP + I++ R
Sbjct: 549 ATATQFIENFPERTYKSMIIPLMQEDKRAGEATRKGFYLYDDRRKAKPDPEIKNYIDKAR 608
Query: 605 RLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSY 664
+S P K+ ++EKEI+EM FPVVNE+CRV EGI V+A+DLD A + GM FP Y
Sbjct: 609 SVSGAKPDPKLE-KLSEKEIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIFGMGFPPY 667
Query: 665 RGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSSTSRAR 724
RGGI+FWAD++G+ Y+Y+ L++WS+ YG FFKP FL ER +KG PLSAP+ SR+R
Sbjct: 668 RGGIMFWADSIGSKYIYSKLEEWSKAYGEFFKPCAFLAERGSKGAPLSAPLEQ---SRSR 724
Query: 725 L 725
L
Sbjct: 725 L 725
>sp|Q9ZPI5|MFP2_ARATH Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2
OS=Arabidopsis thaliana GN=MFP2 PE=1 SV=1
Length = 725
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/719 (59%), Positives = 548/719 (76%), Gaps = 6/719 (0%)
Query: 5 RVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG 64
+ MEVG DGVA+ITLINPPVN+L+ ++ LK +EEA SR+DVKAIV+TG GRFSGG
Sbjct: 8 KTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITGAKGRFSGG 67
Query: 65 FDINVFQKVHGAGDVSLMPD---VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCH 121
FDI+ F ++ G+V P +S++++ +L+E +KP VAA++GLALGGGLELAM CH
Sbjct: 68 FDISGFGEMQ-KGNVK-EPKAGYISIDIITDLLEAARKPSVAAIDGLALGGGLELAMACH 125
Query: 122 ARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
ARI+AP QLGLPEL LGVIPGFGGTQRLPRLVGL+KA+EM+L SK + +EEG LGLID
Sbjct: 126 ARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLTKALEMILTSKPVKAEEGHSLGLID 185
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241
AVV EL+ +R WALDI RRKPW+ S+ +TDKL L EARE+L A+ Q K APNM
Sbjct: 186 AVVPPAELVTTARRWALDIVGRRKPWVSSVSKTDKLPPLGEAREILTFAKAQTLKRAPNM 245
Query: 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDI 301
CLD IE GIV G +G+ KEA+V ++V LDT++GL+HVFF+QR T+KVP VTD
Sbjct: 246 KHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDR 305
Query: 302 GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
GL PR ++KVA+IGGGLMGSGIATA IL+N V+LKEVN ++L GI ++AN++ V +
Sbjct: 306 GLVPRKIKKVAIIGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRK 365
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
G ++Q+K + +LKG LDY F+DVDMVIEAVIE++ LKQ+IF++LEK CP HCILA+
Sbjct: 366 GSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEAVIENISLKQQIFADLEKYCPQHCILAS 425
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTSTIDLN +GE+T SQDRI+GAHFFSPAH+MPLLEIVRT TSAQVI+DL+ VGK IKK
Sbjct: 426 NTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLDVGKKIKK 485
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 541
PVVVGNCTGFAVNR FFPY+Q+A LV G D + ID AI FG+P+GPF+L DL G+G
Sbjct: 486 TPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFG 545
Query: 542 VAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIE 601
VA AT+ +F + F +R+++S ++ L+ + R G+A KG Y Y+ K KPDP + IE
Sbjct: 546 VAIATATQFIENFSERTYKSMIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIE 605
Query: 602 ECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSF 661
+ R +S + K+ +++EK+I+EM FPVVNE+CRV EGI V+A+DLD A ++GM F
Sbjct: 606 KARSISGVKLDPKLA-NLSEKDIIEMTFFPVVNEACRVFAEGIAVKAADLDIAGIMGMGF 664
Query: 662 PSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSAPVSSSST 720
P YRGGI+FWAD++G+ Y+Y+ L +WS+ YG FFKP FL ER +KG+ LSAPV +S+
Sbjct: 665 PPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSAPVKQASS 723
>sp|Q6NYL3|ECHP_DANRE Peroxisomal bifunctional enzyme OS=Danio rerio GN=ehhadh PE=2 SV=1
Length = 718
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 261/723 (36%), Positives = 388/723 (53%), Gaps = 46/723 (6%)
Query: 9 EVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDIN 68
E+ VA+ITL NPPVNAL+ + + E A S V A+V+ G GRF GG DI
Sbjct: 5 ELVKRSVALITLTNPPVNALSSAVRHAISKTMERALSDPKVTAVVICGENGRFCGGADIR 64
Query: 69 VFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK 128
F AG + P V + ++ IE +KP+VAA+EG+ALGGG ELA+ CH RIA K
Sbjct: 65 EF-----AGPLRGPPLVPL---LDAIEAGEKPVVAAIEGVALGGGFELALVCHYRIAHYK 116
Query: 129 TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEE 188
+LGLPE+TLG++P GGTQRLPRL+G+ A+E++ + ++++E KLG++D V T +
Sbjct: 117 ARLGLPEVTLGILPAAGGTQRLPRLIGIPAALELITTGRHVSAQEALKLGMVDQV-TEQN 175
Query: 189 LLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEA--REVLKLARLQAKKTAPNMPQHQA 246
+V+ +AL KP S R L + + + A +Q +K A + A
Sbjct: 176 TCEVALEFALKAVG--KPL--SSRRLSMLTTPCPPGLDGIFEAATMQVQKKARGVMAPLA 231
Query: 247 CLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK--VPNVTDIG- 302
C+ + + YS G+ +E ++ L ++ L + FFAQR K +P+
Sbjct: 232 CVQAVRAATLP--YSEGIKREGELMATLFSSGQAQALQYSFFAQRTAEKWTLPSGAQWNN 289
Query: 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG 362
KPR ++ AVIG G MG GI + L + + + V SE L ++T V G++ R
Sbjct: 290 SKPREIQSAAVIGLGTMGRGIVVS--LARVGISVIAVESEKKL--LETGRQMVIGMLER- 344
Query: 363 KLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422
+ + +L +LK L + KDVD+VIEAV E + LK++IF EL + C P +L +N
Sbjct: 345 DAKRRGVSASLNLLKFSLSLQDLKDVDLVIEAVFEDMALKKQIFRELSRVCRPATLLCSN 404
Query: 423 TSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKV 482
TS +D++ + + T + G HFFSPAHVM LLE+V R+S + I M++GK + KV
Sbjct: 405 TSGLDVDALADVTDRPQLVAGMHFFSPAHVMKLLEVVCGPRSSKEAIATAMSLGKRMGKV 464
Query: 483 PVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 542
V VGNC GF NR PY + A L+ G +ID A+ FG +G F++ DLAG V
Sbjct: 465 SVAVGNCPGFVGNRMLMPYLEQATFLLEEGATPQQIDKALEDFGFAMGVFRMSDLAGLDV 524
Query: 543 AAATSKE-------FDKAFPDRSFQ----SPLVDLLLKSGRNGKANGKGLYTYEK--GSK 589
KE D P R Q P+ D++ + GR G+ G+G Y Y+K +
Sbjct: 525 GWRVRKESGLTGPDVDPKDPPRRRQGRKYCPIPDMVCQQGRFGQKTGRGWYMYDKPGDTN 584
Query: 590 PKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRAS 649
KPDP + ++E R I P +T++EI+E LF + NE R+L++ I +
Sbjct: 585 AKPDPLIQNLLETYRSRYGIQPR-----KITDQEIIERCLFALANEGFRILKDKIAGQPE 639
Query: 650 DLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATK 707
D+D + G FP +RGG +F+A VG V L+ + + +PS L++ +
Sbjct: 640 DIDVIYLFGYGFPRHRGGPMFYASMVGLERVLERLEYYHHALPDVPHLEPSPLLKKLVAR 699
Query: 708 GIP 710
G P
Sbjct: 700 GSP 702
>sp|Q08426|ECHP_HUMAN Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3
Length = 723
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 246/725 (33%), Positives = 389/725 (53%), Gaps = 51/725 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI F
Sbjct: 8 HNALALIRLRNPPVNAISTTLLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIRGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G +++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------LTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHAEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLTGVPAALDLITSGRRILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDSI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + G+ KE ++F L+ +R L + FFA+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGIKKEEELFLYLLQSGQARALQYAFFAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSV--KELGGVDLVIEAVFEEMSLKKQVFAELSAVCKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 541
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 542 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 587
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLLPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 588 SKPKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 647
KPDP + + R+ +I P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKPDPWLSKFLSRYRKTHHIEPR-----TISQDEILERCLYSLINEAFRILGEGIAAS 642
Query: 648 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERA 705
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A
Sbjct: 643 PEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLA 702
Query: 706 TKGIP 710
++G P
Sbjct: 703 SQGNP 707
>sp|Q5R5M8|ECHP_PONAB Peroxisomal bifunctional enzyme OS=Pongo abelii GN=EHHADH PE=2 SV=1
Length = 723
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 245/725 (33%), Positives = 387/725 (53%), Gaps = 51/725 (7%)
Query: 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ 71
++ +A+I L NPPVNA++ ++ +K+ ++A +KAIV+ G G+FS G DI+ F
Sbjct: 8 HNALALIRLRNPPVNAISTALLRDIKEGLQKAVIDHTIKAIVICGAEGKFSAGADIHGFS 67
Query: 72 KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQL 131
G ++ VV+ I+ +KP+VAA++G+A GGGLELA+GCH RIA + Q+
Sbjct: 68 APRTFG-------FTLGHVVDEIQRNEKPVVAAIQGMAFGGGLELALGCHYRIAHSEAQV 120
Query: 132 GLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EE 188
GLPE+TLG++PG GTQ LPRL+G+ A++++ + I ++E KLG++D VV S EE
Sbjct: 121 GLPEVTLGLLPGARGTQLLPRLIGVPAALDLITSGRHILADEALKLGILDKVVNSDPVEE 180
Query: 189 LLKVS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244
++ + R+ + +RR KP I+SL D + SEA +LK+ R P
Sbjct: 181 AIRFAQRVSDQPLESRRLCNKP-IQSLPNMDTI--FSEA--LLKMRRQH-----PGCLAQ 230
Query: 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK 304
+AC+ ++ + + GV KE ++F L +R L + F A+R +K + K
Sbjct: 231 EACVRAVQAAVQYPYEVGVKKEEELFLYLFQSGQARALQYAFLAERKANKWSTPSGASWK 290
Query: 305 ---PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361
R V V V+G G MG GI + I V+ + + L K I + + ++
Sbjct: 291 TASARPVSSVGVVGLGTMGRGIVISFARARIPVIAVDSDKNQLATANKMITSVLEKEASK 350
Query: 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421
+ + + L + E VD+VIEAV E + LK+++F+EL C P L T
Sbjct: 351 MQQSGHPWSGPKPRLTSSM--KELGGVDLVIEAVFEEMSLKKQVFAELSAICKPEAFLCT 408
Query: 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKK 481
NTS +D++ + T +IG HFFSPAHVM LLE++ ++ +S I +M + K IKK
Sbjct: 409 NTSALDVDEIASSTDRPHLVIGTHFFSPAHVMKLLEVIPSQYSSPTTIATVMNLSKKIKK 468
Query: 482 VPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYG 541
+ VVVGNC GF NR PY A L+ G +D + FG +GPF++ DLAG
Sbjct: 469 IGVVVGNCFGFVGNRMLNPYYNQAYFLLEEGSKPEEVDQVLEEFGFKMGPFRVSDLAGLD 528
Query: 542 VAAATSKEFDKAFP------------DRSFQSPLVDLLLKSGRNGKANGKGLYTYEK--G 587
V + K P +R + P+ D+L + GR G+ GKG Y Y+K G
Sbjct: 529 VGWKSRKGQGLTGPTLPPGTPARKRGNRRY-CPIPDVLCELGRFGQKTGKGWYQYDKPLG 587
Query: 588 SKPKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVR 647
K DP + + + R +I P ++++ EI+E L+ ++NE+ R+L EGI
Sbjct: 588 RIHKADPWLSKFLSQYRETHHIEPR-----TISQDEILERCLYSLINEAFRILGEGIAAS 642
Query: 648 ASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERA 705
+D + G +P ++GG +F+A VG V L+K+ + + +PS +L++ A
Sbjct: 643 PEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLA 702
Query: 706 TKGIP 710
++G P
Sbjct: 703 SQGNP 707
>sp|A8A2L0|FADJ_ECOHS Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O9:H4 (strain HS) GN=fadJ PE=3 SV=1
Length = 714
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 236/715 (33%), Positives = 374/715 (52%), Gaps = 33/715 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPGSD 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
P + V ++GGGLMG+GIA + V +K++N + + +K + G
Sbjct: 303 ---APPAPLNSVGILGGGLMGAGIAYVTACKAGLPVRIKDINPQGINHALKYSWDQLEGK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 360 VRRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 420 FASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 538
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEV 539
Query: 539 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 593
G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVD 598
Query: 594 PSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 653
P++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 599 PAIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDI 647
Query: 654 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|A4WCW6|FADJ_ENT38 Fatty acid oxidation complex subunit alpha OS=Enterobacter sp.
(strain 638) GN=fadJ PE=3 SV=1
Length = 715
Score = 359 bits (922), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 231/711 (32%), Positives = 371/711 (52%), Gaps = 31/711 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L ++ ++ +++ ++ ++ F
Sbjct: 8 TLNVRLDNIAVVTIDVPGEKMNTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH+R
Sbjct: 68 GADINMIARAKSAQEAEELARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHSR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L K + + K+GL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL A+++A + + R L +++ G L A ++ + +KT
Sbjct: 187 EVVPHSILLTA----AVELAQKERQASRHLPVRERILAGPLGRALLFNRVGKKTEQKTKG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EAK F EL M S+ L +FFA K P +
Sbjct: 243 NYPATKRILDVIETGLSQGSSSGYAAEAKAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
++ P V G G TA + V +K++N++ + ++ + V
Sbjct: 302 EVAPGPLNAIGVLGGGLMGGGISFVTAS-KGKLPVRIKDINAKGINHALQYSWQLLDQKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R + + + AL ++ G +D+S FK D+VIEAV E + LKQ++ +++E+ C PH I
Sbjct: 361 KRRHIKASERDRALALISGTIDFSGFKHRDVVIEAVFEDLQLKQQMVADVEQYCAPHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+E++ E TSAQ + ++ + K
Sbjct: 421 ASNTSSLPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHESTSAQTVATVVKLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A L++ G V +D A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLTEGEKVENVDDALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 594
+ A+ +R F P +V +L R G+ NG+G Y Y + SK + DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSPPANVVSAILNDDRKGRKNGRGFYLYAAKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
SV +I N GK +T ++ E + ++NE+ R +E ++ A D D
Sbjct: 600 SVYGLI-------NASGQGK----LTAQQCAERCVMMMLNEAARCFDEKVIKNARDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERA 705
+V G+ FP + GG + D++GA V +L++ + LYG+ F P L++ A
Sbjct: 649 AVFGIGFPPFLGGPFRYMDSLGAGEVVATLQRLASLYGSRFTPCETLKQMA 699
>sp|Q8FFG4|FADJ_ECOL6 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=fadJ PE=3
SV=1
Length = 714
Score = 358 bits (920), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 234/714 (32%), Positives = 370/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ D++ +V ++ F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKDLRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIANCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + +KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATKRILDVIETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIADIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>sp|Q8XCP2|FADJ_ECO57 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 GN=fadJ PE=3 SV=1
Length = 714
Score = 355 bits (911), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 232/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A+ + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRAQLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B2TWV4|FADJ_SHIB3 Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 18 (strain CDC 3083-94 / BS512) GN=fadJ PE=3
SV=1
Length = 714
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 232/714 (32%), Positives = 368/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B5XVW2|FADJ_KLEP3 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
(strain 342) GN=fadJ PE=3 SV=1
Length = 714
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 238/716 (33%), Positives = 371/716 (51%), Gaps = 36/716 (5%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKTDNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML + + + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPASRDMPVRERVLAGPLGRHLLFHFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K D
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMTPQSQALRSIFFASTDLKK-----D 298
Query: 301 IGLK--PRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRG 357
G + P + +AV+GGGLMG GIA + V +K++ + +K +
Sbjct: 299 RGAEAEPGPLTSIAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNK 358
Query: 358 LVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHC 417
V + +L + + + M+ G DY F D+VIEAV E + LKQ++ SE+E+ C P
Sbjct: 359 QVRQRRLRPSERDRQMAMISGATDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYCGPQT 418
Query: 418 ILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGK 477
I A+NTS++ + + + R+IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 419 IFASNTSSLPIGDIAAQARRPGRVIGLHFFSPVEKMPLVEVIPHKGTDPQAIATVVQLAK 478
Query: 478 IIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDL 537
K P+VV + GF VNR PY A L+ G V ID A+ FG P+GP QLLD
Sbjct: 479 RQGKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPVEEIDKALVKFGFPVGPIQLLDE 538
Query: 538 AGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKP 592
G + AF +R F SP ++D +LK R G+ N +G Y YE + SK +P
Sbjct: 539 VGIDTGTKIIPVLESAFGER-FSSPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRP 597
Query: 593 DPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLD 652
DP+V P++ R S + + +++ E + ++NE+ R +E I+ A D D
Sbjct: 598 DPAVYPLLGIDRPQSRL----------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGD 647
Query: 653 DASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D +GA V L++ + YG F P L A +G
Sbjct: 648 IGAVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQYGPRFTPCDTLLRMAEQG 703
>sp|B7UFZ8|FADJ_ECO27 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O127:H6 (strain E2348/69 / EPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 368/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASSEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>sp|P07896|ECHP_RAT Peroxisomal bifunctional enzyme OS=Rattus norvegicus GN=Ehhadh PE=1
SV=2
Length = 722
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 244/721 (33%), Positives = 385/721 (53%), Gaps = 50/721 (6%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A S VKAIV+ G G F G DI+ F
Sbjct: 11 LAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFS--- 67
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
+ P +++ +V+ I+ +KP++AA++G+ALGGGLELA+GCH RIA K ++GLP
Sbjct: 68 -----AFTPGLALGSLVDEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLP 122
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTS---EELLK 191
E+TLG++PG GTQ LPR+VG+ A++++ K ++++E +LG++DAVV S EE +K
Sbjct: 123 EVTLGILPGARGTQLLPRVVGVPVALDLITSGKYLSADEALRLGILDAVVKSDPVEEAIK 182
Query: 192 VS-RLWALDIAARR---KPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247
+ ++ I RR KP + SL V A + +K P + + C
Sbjct: 183 FAQKIIDKPIEPRRIFNKP----------VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 232
Query: 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK--- 304
+ I+ + H G+ +E K+F L ++ L + FFA+++ +K + K
Sbjct: 233 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTAS 292
Query: 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL 364
+ V V V+G G MG GIA + I VV E + + L K I + +R
Sbjct: 293 AQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAH- 351
Query: 365 TQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424
Q+ +A L+ E VD+V+EAV E + LK+K+F+EL C P L TNTS
Sbjct: 352 -QNGQASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTS 410
Query: 425 TIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484
++++ + T +IG HFFSPAHVM LLE++ + +S I +M++ K I K+ V
Sbjct: 411 ALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 470
Query: 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA- 543
VVGNC GF NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 471 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGW 530
Query: 544 ------AATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPK 591
T P R S SPL D+L ++GR G+ GKG Y Y+K G K
Sbjct: 531 KIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHK 590
Query: 592 PDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDL 651
PDP + + + R + +I +++++EI+E L+ ++NE+ R+LEEG+ R +
Sbjct: 591 PDPWLSTFLSQYREVHHIEQR-----TISKEEILERCLYSLINEAFRILEEGMAARPEHI 645
Query: 652 DDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGI 709
D + G +P ++GG +F+A +VG V L+K+ + + +PS +L +G
Sbjct: 646 DVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 705
Query: 710 P 710
P
Sbjct: 706 P 706
>sp|B5YXY4|FADJ_ECO5E Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O157:H7 (strain EC4115 / EHEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 232/714 (32%), Positives = 366/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVAHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|Q1R972|FADJ_ECOUT Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain UTI89 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 368/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>sp|A1ADI8|FADJ_ECOK1 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O1:K1 / APEC GN=fadJ PE=3 SV=1
Length = 714
Score = 354 bits (908), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 368/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>sp|B7MY16|FADJ_ECO81 Fatty acid oxidation complex subunit alpha OS=Escherichia coli O81
(strain ED1a) GN=fadJ PE=3 SV=1
Length = 714
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 368/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>sp|A7ZPF8|FADJ_ECO24 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O139:H28 (strain E24377A / ETEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 232/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B7MGV7|FADJ_ECO45 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O45:K1 (strain S88 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 353 bits (907), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 368/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQIRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPRGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGCKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCDRLVEMSERG 702
>sp|B6I6Q4|FADJ_ECOSE Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SE11) GN=fadJ PE=3 SV=1
Length = 714
Score = 353 bits (906), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 232/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B7NP24|FADJ_ECO7I Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 353 bits (905), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 369/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>sp|Q3YZM2|FADJ_SHISS Fatty acid oxidation complex subunit alpha OS=Shigella sonnei
(strain Ss046) GN=fadJ PE=3 SV=1
Length = 714
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|Q83QQ0|FADJ_SHIFL Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
GN=fadJ PE=3 SV=1
Length = 714
Score = 352 bits (903), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|Q0T2E6|FADJ_SHIF8 Fatty acid oxidation complex subunit alpha OS=Shigella flexneri
serotype 5b (strain 8401) GN=fadJ PE=3 SV=1
Length = 714
Score = 352 bits (902), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-INALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B7N5V2|FADJ_ECOLU Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O17:K52:H18 (strain UMN026 / ExPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 352 bits (902), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 231/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 MCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDRQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R L+E ++ D D
Sbjct: 600 AIYPLI-----------GTQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>sp|Q0TFA6|FADJ_ECOL5 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
O6:K15:H31 (strain 536 / UPEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 352 bits (902), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 230/709 (32%), Positives = 368/709 (51%), Gaps = 32/709 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQAVKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCATHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDTALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIMPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ L+E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVCCLDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKP-SRFLE 702
+V G+ FP + GG + D++GA V +++ + YG+ F P +RF+E
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCNRFVE 697
>sp|B1IXA5|FADJ_ECOLC Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1
Length = 714
Score = 351 bits (900), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 367/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++ + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELVKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>sp|Q31YB7|FADJ_SHIBS Fatty acid oxidation complex subunit alpha OS=Shigella boydii
serotype 4 (strain Sb227) GN=fadJ PE=3 SV=1
Length = 714
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 366/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F
Sbjct: 8 TLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTVQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S +EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTTLEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTKGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVSERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|P77399|FADJ_ECOLI Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12) GN=fadJ PE=1 SV=1
Length = 714
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 365/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B1X9L4|FADJ_ECODH Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / DH10B) GN=fadJ PE=3 SV=1
Length = 714
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 365/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|C4ZVN2|FADJ_ECOBW Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain K12 / MC4100 / BW2952) GN=fadJ PE=3 SV=1
Length = 714
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 365/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I ++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIQVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKKERPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA I V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGIPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTQGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GTQGQGRISAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B1LME7|FADJ_ECOSM Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 350 bits (897), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 230/718 (32%), Positives = 369/718 (51%), Gaps = 31/718 (4%)
Query: 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGG 59
A T+ V D +AIIT+ P +N L + ++ ++ +++ +V +
Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPD 63
Query: 60 RFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMG 119
F G DIN+ A + ++ +L+ I P++AA+ G LGGGLELA+
Sbjct: 64 NFIAGADINMIGNCKTAQEAEVLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALA 122
Query: 120 CHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKL 177
CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KL
Sbjct: 123 CHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKL 182
Query: 178 GLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAK 235
GL+D VV LL+ A+++A + +P R L +++ G L A + +
Sbjct: 183 GLVDDVVPQSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEH 238
Query: 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295
KT N P + L+V+E G+ G SG EA+ F EL M S+ L ++FFA K
Sbjct: 239 KTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRNIFFASTEVKK- 297
Query: 296 PNVTDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANV 355
+ +D P + G G TA + V +K++N + + +K +
Sbjct: 298 DSGSDAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLSVRIKDINPQGINHALKYSWDQL 356
Query: 356 RGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPP 415
G V R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C
Sbjct: 357 EGKVRRRHLKASERDKQLALISGTTDYCGFAHRDLIIEAVFENLELKQQMVAEVEQNCAT 416
Query: 416 HCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTV 475
H I A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + +
Sbjct: 417 HTIFASNTSSLPIGDIAAHAARPEQVIGLHFFSPVEKMPLVEIIPHASTSAQTIATTVKL 476
Query: 476 GKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLL 535
K K P+VV + GF VNR PY A +++ G + ID+A+ FG P+GP QLL
Sbjct: 477 AKKQGKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERIEHIDAALVKFGFPVGPIQLL 536
Query: 536 DLAGYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP 592
D G + A+ +R F +P +V +L R G+ NG+G Y Y +KG K K
Sbjct: 537 DEVGIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKK 595
Query: 593 --DPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASD 650
DP++ P+I G + ++ ++ E + ++NE+ R L+E ++ D
Sbjct: 596 QVDPAIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCLDEQVIRSVRD 644
Query: 651 LDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
D +V G+ FP + GG + D++GA V +++ + YG+ F P L E + +G
Sbjct: 645 GDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMSKRG 702
>sp|Q32DJ4|FADJ_SHIDS Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae
serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1
Length = 714
Score = 349 bits (895), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 365/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +AIIT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQDQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT L LPE+ LG++PG GTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+ A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEA----AVELAKQDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F ELVM S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELVMTPQSQALRSIFFASTEVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ C H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNCAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVIAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|A6TC19|FADJ_KLEP7 Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae
subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
GN=fadJ PE=3 SV=1
Length = 714
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 369/714 (51%), Gaps = 32/714 (4%)
Query: 8 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGG 64
+EV D +A+IT+ P +N L + ++ + V+ +V ++ F G
Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGSQVRGLIRQLRDDKSVRGVVFISAKADNFIAG 68
Query: 65 FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARI 124
DIN+ + A + + +++ I P++AA+ G LGGGLELA+ CH RI
Sbjct: 69 ADINMIARCRSAQEAEALARQGQQIMAE-IHGLSIPVIAAIHGACLGGGLELALACHGRI 127
Query: 125 AA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDA 182
+ KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML K + + K GL+D
Sbjct: 128 CSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGKQLRPRQALKAGLVDE 187
Query: 183 VVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK--LARLQAKKTAPN 240
VV LL+ A+++A + +P R + +++ + R +L + + +KT N
Sbjct: 188 VVPQAILLQA----AVELALKGRPTSREVPVRERVLAGPLGRHLLFQFVGKQTQRKTQGN 243
Query: 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTD 300
P + L V+E G+ HG SG +EA+ F EL M S+ L +FFA K P
Sbjct: 244 YPAVKRILQVVENGLAHGCSSGYAEEARAFGELAMSPQSQALRSIFFASTDLKKDPGAE- 302
Query: 301 IGLKPRGVRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLV 359
P +R VAV+GGGLMG GIA + V +K++ + +K + V
Sbjct: 303 --AGPGSLRSVAVLGGGLMGGGIAYVTACKGGLPVRIKDIQPRGINHALKYSWDLLNKQV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
+ +L + + + ++ G DY F D+VIEAV E + LKQ++ SE+E+ P I
Sbjct: 361 RQRRLRPVERDRQMALISGTTDYQGFAHRDVVIEAVFEDLALKQRMVSEVEQYGGPQTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + S ++IG HFFSP MPL+E++ + T Q I ++ + K
Sbjct: 421 ASNTSSLPIGDIAAHASRPGQVIGLHFFSPVEKMPLVEMIPHKGTDPQTIATVVQLAKRQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A L+ G + ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVADKAGFYVNRILAPYINEAMRLLVEGEPIEVIDNALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTYE---KGSKPKPDP 594
+ AF +R F P ++D +LK R G+ N +G Y YE + SK +PDP
Sbjct: 541 IDTGTKIIPVLESAFGER-FSPPANIIDAILKDDRKGRKNNRGFYLYETKGRKSKKRPDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
+V P++ R S + + +++ E + ++NE+ R +E I+ A D D
Sbjct: 600 AVYPLLGIGRPQSRL----------SAQQVAERCVMMMLNEAARCFDEQIIRSARDGDIG 649
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D +GA V L++ + +G F P L A +G
Sbjct: 650 AVFGIGFPPFLGGPFRYMDTIGAGEVAAILQRLAAQFGPRFTPCDTLLRMAEQG 703
>sp|B7M6M2|FADJ_ECO8A Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8
(strain IAI1) GN=fadJ PE=3 SV=1
Length = 714
Score = 348 bits (893), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 230/714 (32%), Positives = 366/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTA-CKAGLPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B7LBJ5|FADJ_ECO55 Fatty acid oxidation complex subunit alpha OS=Escherichia coli
(strain 55989 / EAEC) GN=fadJ PE=3 SV=1
Length = 714
Score = 347 bits (889), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 229/714 (32%), Positives = 366/714 (51%), Gaps = 31/714 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSG 63
T+ V D +A+IT+ P +N L + ++ ++ +++ +V + F
Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIGNCKTAQEAEALARQGQQLMAE-IHALPIPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D
Sbjct: 127 VCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
VV LL+V A+++A + +P R L +++ G L A + + KT
Sbjct: 187 DVVPHSILLEV----AVELAKKDRPSSRPLPVRERILAGPLGRALLFKMVGKKTEHKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P + L+V+E G+ G SG EA+ F EL M S+ L +FFA K P +
Sbjct: 243 NYPATERILEVVETGLAQGTSSGYDAEARAFGELAMTPQSQALRSIFFASTDVKKDPG-S 301
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV 359
D P + G G TA + + V +K++N + + +K + G V
Sbjct: 302 DAPPAPLNSVGILGGGLMGGGIAYVTACKVG-LPVRIKDINPQGINHALKYSWDQLEGKV 360
Query: 360 TRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCIL 419
R L + + L ++ G DY F D++IEAV E++ LKQ++ +E+E+ H I
Sbjct: 361 RRRHLKASERDKQLALISGTTDYRGFAHRDLIIEAVFENLELKQQMVAEVEQNSAAHTIF 420
Query: 420 ATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKII 479
A+NTS++ + + + +++IG HFFSP MPL+EI+ TSAQ I + + K
Sbjct: 421 ASNTSSLPIGDIAAHATRPEQVIGLHFFSPVEKMPLVEIIPHAGTSAQTIATTVKLAKKQ 480
Query: 480 KKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAG 539
K P+VV + GF VNR PY A +++ G V ID+ + FG P+GP QLLD G
Sbjct: 481 GKTPIVVRDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAVLVKFGFPVGPIQLLDEVG 540
Query: 540 YGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DP 594
+ A+ +R F +P +V +L R G+ NG+G Y Y +KG K K DP
Sbjct: 541 IDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDP 599
Query: 595 SVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDA 654
++ P+I G + ++ ++ E + ++NE+ R ++E ++ D D
Sbjct: 600 AIYPLI-----------GAQGQGRLSAPQVAERCVMLMLNEAVRCVDEQVIRSVRDGDIG 648
Query: 655 SVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA V +++ + YG+ F P L E +G
Sbjct: 649 AVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLATQYGSRFTPCERLVEMGARG 702
>sp|B7LLD0|FADJ_ESCF3 Fatty acid oxidation complex subunit alpha OS=Escherichia
fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73)
GN=fadJ PE=3 SV=1
Length = 714
Score = 346 bits (888), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 242/715 (33%), Positives = 373/715 (52%), Gaps = 33/715 (4%)
Query: 7 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSG 63
T+ V D +A++T+ P +N L A ++ +E +++ +V ++ F
Sbjct: 8 TLNVRLDHIAVVTIDVPGEKMNTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIA 67
Query: 64 GFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHAR 123
G DIN+ + A + + +L+ I P++AA+ G LGGGLELA+ CH R
Sbjct: 68 GADINMIDHCNTAMEAETLARQGQQLMAE-IHALPVPVIAAIHGACLGGGLELALACHGR 126
Query: 124 IAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLID 181
I PKT LGLPE+ LG++PG GGTQRLPRLVGLS A++M+L K + + K GL+D
Sbjct: 127 ICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVD 186
Query: 182 AVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAP 239
+V LL+ A++ A + + RSL +++ G L + +++ +KT
Sbjct: 187 EIVPQSILLQA----AVERAKQERQTPRSLPVRERILAGPLGRSLLFRFVSKKTDQKTQG 242
Query: 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT 299
N P LDVIE G+ G SG EA+ F EL M S+ L ++FFA K P T
Sbjct: 243 NYPATTRILDVIETGLSQGSSSGYDAEARAFGELAMTSQSQSLRNIFFASTEVKKDPGST 302
Query: 300 DIGLKPRGVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGL 358
++P + + ++GGGLMG GIA + V +K++N + + +K +
Sbjct: 303 ---VQPGTLDSIGILGGGLMGGGIAFVTACKAGLPVRIKDINPQGINHALKYSWQLLDAK 359
Query: 359 VTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCI 418
V R + + L + G DY F D+VIEAV E + LKQ++ +E+EK C H I
Sbjct: 360 VRRRHIKAGEQARQLAKISGTTDYQGFAHRDVVIEAVFEDLSLKQQMVAEVEKNCGLHTI 419
Query: 419 LATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKI 478
A+NTS+I ++ + + +++IG HFFSP MPL+E++ TS + I ++ + K
Sbjct: 420 FASNTSSIPISDIAAHATRPEQVIGLHFFSPVEKMPLVEVIPHAATSEKTIATIVKLAKK 479
Query: 479 IKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLA 538
K P+VV + GF VNR PY A L++ G V ID+A+ FG P+GP QLLD
Sbjct: 480 QGKTPIVVQDKAGFYVNRILAPYINEAIRLLTEGEKVETIDTALVKFGFPVGPIQLLDEV 539
Query: 539 GYGVAAATSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--D 593
G + A+ +R F +P +V +L R G+ NG+G Y Y KG K K D
Sbjct: 540 GIDTGTKIIPVLEAAYGER-FSAPANVVSSILNDDRKGRKNGRGFYLYGAKGRKSKKQVD 598
Query: 594 PSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDD 653
P + I I G+ +S ++I E + ++NE+ R EG++ A D D
Sbjct: 599 PEIYKI---------IAVQGQSKLSA--QQITERCVMLMLNEAARCYREGVIRHARDGDI 647
Query: 654 ASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 708
+V G+ FP + GG + D++GA+ V L++ + LYG+ F P L + A +G
Sbjct: 648 GAVFGIGFPPFLGGPFRYMDSLGASEVVAVLQRLTSLYGSRFTPCEQLLQMAERG 702
>sp|B5BBA1|FADJ_SALPK Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain AKU_12601) GN=fadJ PE=3 SV=1
Length = 715
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 362/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINI 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|Q5PCX6|FADJ_SALPA Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi
A (strain ATCC 9150 / SARB42) GN=fadJ PE=3 SV=1
Length = 715
Score = 343 bits (881), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 362/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINI 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|B5FPN1|FADJ_SALDC Fatty acid oxidation complex subunit alpha OS=Salmonella dublin
(strain CT_02021853) GN=fadJ PE=3 SV=1
Length = 715
Score = 343 bits (880), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 362/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILVPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|B5R3R9|FADJ_SALEP Fatty acid oxidation complex subunit alpha OS=Salmonella
enteritidis PT4 (strain P125109) GN=fadJ PE=3 SV=1
Length = 715
Score = 343 bits (879), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 362/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|B5RCL3|FADJ_SALG2 Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum
(strain 287/91 / NCTC 13346) GN=fadJ PE=3 SV=1
Length = 715
Score = 342 bits (878), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 362/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
++ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ANERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINKAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|Q9DBM2|ECHP_MOUSE Peroxisomal bifunctional enzyme OS=Mus musculus GN=Ehhadh PE=1 SV=4
Length = 718
Score = 342 bits (877), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 233/714 (32%), Positives = 375/714 (52%), Gaps = 40/714 (5%)
Query: 15 VAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH 74
+A+I L NPPVNA++ ++ +++ ++A+ V+AIV+ G F G DI+ F+
Sbjct: 11 LAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPT 70
Query: 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP 134
G +++ +V+ I+ +KP+VAA++G+ALGGGLELA+GCH RIA K ++G P
Sbjct: 71 G---------LTLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFP 121
Query: 135 ELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSR 194
E+ LG++PG GTQ LPR+VG+ A++++ + I+++E KLG++D VV S+ + + +
Sbjct: 122 EVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVEEAIK 181
Query: 195 LWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEG 254
I +P R L++ + SL V A + +K P + C+ ++
Sbjct: 182 FAQTVIGKPIEPR-RILNKP--VPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQAS 238
Query: 255 IVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLK---PRGVRKV 311
+ H + +EAK+F L +R L + FFA+++ +K + K + V V
Sbjct: 239 VKHPYEVAIKEEAKLFMYLRGSGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSV 298
Query: 312 AVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN 371
V+G G MG GIA + I VV E + + L K I + + ++ K N
Sbjct: 299 GVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPN- 357
Query: 372 ALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431
L+ E VD+VIEAV E + LK+K+F+EL C P L TNTS +D++ +
Sbjct: 358 ----LRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDI 413
Query: 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491
T +IG HFFSPAH+M LLE++ + +S I +M++ K I K+ VVVGNC G
Sbjct: 414 ASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYG 473
Query: 492 FAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVA-------A 544
F NR PY L+ G +D + FG +GPF++ DLAG V
Sbjct: 474 FVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQG 533
Query: 545 ATSKEFDKAFPDR----SFQSPLVDLLLKSGRNGKANGKGLYTYEK--GSKPKPDPSVLP 598
T P R + SP+ D+L ++GR G+ GKG Y Y+K G KPDP +
Sbjct: 534 LTGPSLPPGTPTRKRGNTRYSPIADMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSE 593
Query: 599 IIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 658
+ + R +I S++++EI+E L+ ++NE+ R+LEEG+ +D + G
Sbjct: 594 FLSQYRETHHIKQR-----SISKEEILERCLYSLINEAFRILEEGMAASPEHIDVIYLHG 648
Query: 659 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRFLEERATKGIP 710
+P + GG +++A +VG V L+K+ + + +PS +L +G P
Sbjct: 649 YGWPRHVGGPMYYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 702
>sp|Q8Z4Z0|FADJ_SALTI Fatty acid oxidation complex subunit alpha OS=Salmonella typhi
GN=fadJ PE=3 SV=1
Length = 715
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 227/701 (32%), Positives = 359/701 (51%), Gaps = 31/701 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 701
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
>sp|B4TCA8|FADJ_SALHS Fatty acid oxidation complex subunit alpha OS=Salmonella heidelberg
(strain SL476) GN=fadJ PE=3 SV=1
Length = 715
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 361/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|B5EZR9|FADJ_SALA4 Fatty acid oxidation complex subunit alpha OS=Salmonella agona
(strain SL483) GN=fadJ PE=3 SV=1
Length = 715
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 228/707 (32%), Positives = 361/707 (51%), Gaps = 31/707 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCAAHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATK 707
FP + GG + DA+G + +L++ + LYG + P L A +
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
>sp|B4SZR0|FADJ_SALNS Fatty acid oxidation complex subunit alpha OS=Salmonella newport
(strain SL254) GN=fadJ PE=3 SV=1
Length = 715
Score = 342 bits (876), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 227/701 (32%), Positives = 359/701 (51%), Gaps = 31/701 (4%)
Query: 13 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINV 69
D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+
Sbjct: 14 DNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINM 73
Query: 70 FQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-- 127
A + + +L+ I+ P++AA+ G LGGGLE+A+ CH RI
Sbjct: 74 IGHCQNAQEAETLARQGQQLMAE-IQALPVPVIAAIHGACLGGGLEMALACHRRICTDDV 132
Query: 128 KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE 187
KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L K + + + K GL+D VV
Sbjct: 133 KTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILTGKQLRARQALKAGLVDDVVPQT 192
Query: 188 ELLKVSRLWALDIAARRKPWIRSLHRTDKL--GSLSEAREVLKLARLQAKKTAPNMPQHQ 245
LL+ A+++A + + R+L +++ G L A + + A+KT N P +
Sbjct: 193 ILLEA----AVELAKKERLAQRTLPVRERILAGPLGRALLFRLVRKKTAQKTQGNYPATE 248
Query: 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKP 305
+DVIE G+ G SG EA+ F EL M S+ L VFFA K P +D P
Sbjct: 249 RIIDVIETGLAQGSSSGYDAEARAFGELAMTPQSQALRAVFFASTEVKKDPG-SDAPPGP 307
Query: 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT 365
+ G G TA + V +K++N++ + +K + V R +
Sbjct: 308 LNSVGILGGGLMGGGIAWVTA-CKGGLPVRIKDINTQGINHALKYSWDLLETKVRRRHIK 366
Query: 366 QDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425
+ + L ++ G DY F D+VIEAV E +PLKQ++ +E+E+ C H I A+NTS+
Sbjct: 367 ASERDKQLALISGSTDYRGFSHRDLVIEAVFEDLPLKQQMVAEVEQNCATHTIFASNTSS 426
Query: 426 IDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVV 485
+ + + + +++IG HFFSP MPL+E++ TSAQ I + + K K P+V
Sbjct: 427 LPIGDIAANAARPEQVIGLHFFSPVEKMPLVEVIPHASTSAQTIATTVKLAKKQGKTPIV 486
Query: 486 VGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAA 545
V + GF VNR PY A +++ G V ID+A+ FG P+GP QLLD G
Sbjct: 487 VSDKAGFYVNRILAPYINEAIRMLTEGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTK 546
Query: 546 TSKEFDKAFPDRSFQSP--LVDLLLKSGRNGKANGKGLYTY-EKGSKPKP--DPSVLPII 600
+ A+ +R F +P +V +L R G+ NG+G Y Y EKG K K DP++ +I
Sbjct: 547 IIPVLEAAYGER-FSAPANVVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI 605
Query: 601 EECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMS 660
G + ++ +++ E + ++NE+ R +E ++ A D D +V G+
Sbjct: 606 -----------GVQGQSRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIG 654
Query: 661 FPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFL 701
FP + GG + DA+G + +L++ + LYG + P L
Sbjct: 655 FPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQL 695
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,182,550
Number of Sequences: 539616
Number of extensions: 11822122
Number of successful extensions: 35443
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 389
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 33847
Number of HSP's gapped (non-prelim): 451
length of query: 725
length of database: 191,569,459
effective HSP length: 125
effective length of query: 600
effective length of database: 124,117,459
effective search space: 74470475400
effective search space used: 74470475400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)