Query 004891
Match_columns 725
No_of_seqs 540 out of 4600
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 08:58:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004891.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004891hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 1E-133 4E-138 1164.0 72.7 688 8-714 25-731 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 2E-125 6E-130 1103.6 73.8 707 1-714 4-717 (725)
3 1wdk_A Fatty oxidation complex 100.0 9E-125 3E-129 1097.2 68.0 695 3-713 5-715 (715)
4 3k6j_A Protein F01G10.3, confi 100.0 2.8E-79 9.6E-84 670.9 39.7 413 286-712 28-448 (460)
5 1zcj_A Peroxisomal bifunctiona 100.0 4.5E-74 1.6E-78 640.7 40.8 431 275-712 1-449 (463)
6 3mog_A Probable 3-hydroxybutyr 100.0 6.6E-73 2.3E-77 630.7 44.1 405 306-714 3-476 (483)
7 3hrx_A Probable enoyl-COA hydr 100.0 1.5E-53 5.2E-58 438.7 29.0 250 6-295 2-252 (254)
8 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 2.9E-53 9.8E-58 440.1 28.3 254 4-295 15-272 (274)
9 4fzw_A 2,3-dehydroadipyl-COA h 100.0 4.9E-53 1.7E-57 434.8 25.9 250 5-295 6-256 (258)
10 3ado_A Lambda-crystallin; L-gu 100.0 2.2E-52 7.5E-57 438.3 23.9 268 307-585 5-281 (319)
11 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 2.5E-52 8.5E-57 434.7 24.0 257 308-586 12-273 (293)
12 3kqf_A Enoyl-COA hydratase/iso 100.0 7.3E-52 2.5E-56 428.1 26.3 256 1-295 5-263 (265)
13 3pea_A Enoyl-COA hydratase/iso 100.0 7.6E-52 2.6E-56 427.0 25.8 255 3-295 5-259 (261)
14 3i47_A Enoyl COA hydratase/iso 100.0 1.2E-51 4.1E-56 426.5 26.3 257 1-296 1-261 (268)
15 4e12_A Diketoreductase; oxidor 100.0 9.1E-52 3.1E-56 433.4 25.0 275 307-584 3-283 (283)
16 3hin_A Putative 3-hydroxybutyr 100.0 6.4E-52 2.2E-56 429.4 22.9 255 1-296 13-268 (275)
17 3moy_A Probable enoyl-COA hydr 100.0 1.6E-51 5.3E-56 424.8 25.1 254 1-295 6-261 (263)
18 3h81_A Enoyl-COA hydratase ECH 100.0 2.2E-51 7.5E-56 426.1 25.2 254 1-295 22-276 (278)
19 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 1.7E-50 5.7E-55 428.2 31.9 283 303-585 10-302 (302)
20 3gow_A PAAG, probable enoyl-CO 100.0 1.1E-50 3.8E-55 416.9 28.9 250 6-295 2-252 (254)
21 3fdu_A Putative enoyl-COA hydr 100.0 9.3E-51 3.2E-55 419.7 27.0 253 1-296 1-258 (266)
22 3lke_A Enoyl-COA hydratase; ny 100.0 4E-51 1.4E-55 422.1 22.9 256 1-294 1-262 (263)
23 3swx_A Probable enoyl-COA hydr 100.0 4.4E-51 1.5E-55 422.5 22.8 256 1-295 5-263 (265)
24 3myb_A Enoyl-COA hydratase; ss 100.0 1.3E-50 4.4E-55 422.4 26.3 256 1-296 22-280 (286)
25 3p5m_A Enoyl-COA hydratase/iso 100.0 1.8E-50 6.2E-55 415.3 26.8 246 4-294 6-252 (255)
26 3g64_A Putative enoyl-COA hydr 100.0 2.8E-50 9.5E-55 419.7 28.1 256 3-296 16-276 (279)
27 3sll_A Probable enoyl-COA hydr 100.0 2.8E-50 9.7E-55 421.0 27.4 254 4-295 24-287 (290)
28 3qmj_A Enoyl-COA hydratase, EC 100.0 6.8E-51 2.3E-55 419.2 21.7 251 3-291 5-256 (256)
29 1nzy_A Dehalogenase, 4-chlorob 100.0 1.9E-50 6.4E-55 419.0 25.1 257 1-296 1-262 (269)
30 2ppy_A Enoyl-COA hydratase; be 100.0 6.1E-50 2.1E-54 414.2 28.0 252 3-294 8-262 (265)
31 3rsi_A Putative enoyl-COA hydr 100.0 4.9E-50 1.7E-54 414.7 26.9 253 1-295 5-263 (265)
32 2ej5_A Enoyl-COA hydratase sub 100.0 4.3E-50 1.5E-54 413.5 26.2 250 4-294 3-254 (257)
33 3qxz_A Enoyl-COA hydratase/iso 100.0 1E-50 3.4E-55 419.6 20.8 253 3-295 6-262 (265)
34 2pbp_A Enoyl-COA hydratase sub 100.0 6.1E-50 2.1E-54 412.6 26.0 253 1-294 1-255 (258)
35 3gkb_A Putative enoyl-COA hydr 100.0 3.1E-50 1.1E-54 419.4 23.9 248 3-291 8-261 (287)
36 4hdt_A 3-hydroxyisobutyryl-COA 100.0 9E-50 3.1E-54 427.2 27.1 291 3-296 8-324 (353)
37 3trr_A Probable enoyl-COA hydr 100.0 5.8E-50 2E-54 411.4 24.6 249 1-295 5-254 (256)
38 3tlf_A Enoyl-COA hydratase/iso 100.0 3.2E-50 1.1E-54 418.4 22.8 253 4-295 11-272 (274)
39 3qre_A Enoyl-COA hydratase, EC 100.0 8.3E-51 2.8E-55 426.0 17.8 256 3-296 28-293 (298)
40 1ef8_A Methylmalonyl COA decar 100.0 7.1E-50 2.4E-54 412.8 24.1 253 1-294 1-258 (261)
41 2vx2_A Enoyl-COA hydratase dom 100.0 1.1E-49 3.6E-54 415.7 24.8 252 4-294 33-285 (287)
42 3r9q_A Enoyl-COA hydratase/iso 100.0 2.8E-50 9.6E-55 414.9 20.2 248 5-295 12-260 (262)
43 3hp0_A Putative polyketide bio 100.0 2E-49 7E-54 409.2 26.2 253 1-296 4-258 (267)
44 4f47_A Enoyl-COA hydratase ECH 100.0 7.1E-50 2.4E-54 416.4 22.4 254 3-295 19-276 (278)
45 1dci_A Dienoyl-COA isomerase; 100.0 2.9E-49 1E-53 411.6 27.0 256 2-294 1-272 (275)
46 1wz8_A Enoyl-COA hydratase; ly 100.0 1.1E-49 3.7E-54 411.9 23.5 253 3-294 9-263 (264)
47 4eml_A Naphthoate synthase; 1, 100.0 1.7E-49 5.7E-54 412.0 24.9 256 2-296 8-270 (275)
48 3r9t_A ECHA1_1; ssgcid, seattl 100.0 6.4E-50 2.2E-54 413.7 21.7 253 3-295 8-265 (267)
49 2f6q_A Peroxisomal 3,2-trans-e 100.0 2.1E-49 7.2E-54 412.7 24.0 252 2-292 24-279 (280)
50 3qxi_A Enoyl-COA hydratase ECH 100.0 2.7E-49 9.1E-54 408.6 23.7 250 2-295 13-263 (265)
51 1sg4_A 3,2-trans-enoyl-COA iso 100.0 1E-49 3.4E-54 411.2 20.0 249 7-294 8-259 (260)
52 2uzf_A Naphthoate synthase; ly 100.0 7.9E-49 2.7E-53 407.1 26.8 252 3-295 12-267 (273)
53 3qk8_A Enoyl-COA hydratase ECH 100.0 1E-49 3.4E-54 413.3 19.7 253 3-296 12-268 (272)
54 2j5i_A P-hydroxycinnamoyl COA 100.0 4E-49 1.4E-53 410.0 23.9 251 3-290 8-265 (276)
55 3rrv_A Enoyl-COA hydratase/iso 100.0 3E-49 1E-53 409.9 22.9 247 4-290 28-276 (276)
56 3t89_A 1,4-dihydroxy-2-naphtho 100.0 5.9E-49 2E-53 410.1 24.7 258 1-296 24-284 (289)
57 3lao_A Enoyl-COA hydratase/iso 100.0 1.3E-49 4.3E-54 410.0 19.3 247 2-287 10-258 (258)
58 3oc7_A Enoyl-COA hydratase; se 100.0 7.6E-49 2.6E-53 406.5 24.9 252 1-294 5-265 (267)
59 2fbm_A Y chromosome chromodoma 100.0 3E-49 1E-53 412.7 21.7 256 2-296 21-282 (291)
60 2a7k_A CARB; crotonase, antibi 100.0 3.6E-49 1.2E-53 405.2 21.6 247 6-291 2-250 (250)
61 2gtr_A CDY-like, chromodomain 100.0 4.3E-49 1.5E-53 406.9 21.9 252 3-293 4-260 (261)
62 1mj3_A Enoyl-COA hydratase, mi 100.0 1.1E-48 3.7E-53 403.5 24.0 253 2-294 2-257 (260)
63 1uiy_A Enoyl-COA hydratase; ly 100.0 8.8E-49 3E-53 403.0 23.0 248 6-293 2-252 (253)
64 3h0u_A Putative enoyl-COA hydr 100.0 1.5E-48 5.2E-53 407.1 25.0 248 2-288 6-257 (289)
65 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 5.7E-49 2E-53 416.5 21.6 256 3-296 54-329 (334)
66 3l3s_A Enoyl-COA hydratase/iso 100.0 1.4E-48 4.9E-53 403.0 23.2 251 1-289 3-258 (263)
67 3pe8_A Enoyl-COA hydratase; em 100.0 6.3E-49 2.1E-53 403.1 19.8 244 3-294 8-255 (256)
68 3he2_A Enoyl-COA hydratase ECH 100.0 3.4E-48 1.1E-52 398.4 21.8 242 3-295 20-262 (264)
69 4di1_A Enoyl-COA hydratase ECH 100.0 5.6E-48 1.9E-52 400.0 23.3 243 1-293 22-264 (277)
70 1hzd_A AUH, AU-binding protein 100.0 6.8E-48 2.3E-52 399.9 21.1 253 4-294 8-269 (272)
71 3bpt_A 3-hydroxyisobutyryl-COA 100.0 5.5E-47 1.9E-51 407.9 24.6 290 3-296 5-331 (363)
72 3isa_A Putative enoyl-COA hydr 100.0 2.6E-47 9E-52 391.5 20.9 242 5-296 8-250 (254)
73 2q35_A CURF; crotonase, lyase; 100.0 2.9E-47 9.8E-52 388.6 19.6 239 5-287 3-243 (243)
74 1pjh_A Enoyl-COA isomerase; EC 100.0 1.1E-46 3.8E-51 392.7 21.7 244 1-294 6-267 (280)
75 3ju1_A Enoyl-COA hydratase/iso 100.0 3.5E-47 1.2E-51 413.3 18.4 290 4-296 42-376 (407)
76 3r6h_A Enoyl-COA hydratase, EC 100.0 3.7E-46 1.3E-50 378.0 19.3 230 1-271 3-232 (233)
77 2j5g_A ALR4455 protein; enzyme 100.0 5.4E-46 1.9E-50 382.5 20.5 238 3-290 22-262 (263)
78 3ot6_A Enoyl-COA hydratase/iso 100.0 1E-45 3.6E-50 374.4 17.2 225 4-270 6-231 (232)
79 3m6n_A RPFF protein; enoyl-COA 100.0 1.6E-44 5.4E-49 379.9 24.7 256 3-296 29-301 (305)
80 3njd_A Enoyl-COA hydratase; ss 100.0 4.4E-44 1.5E-48 381.2 24.7 204 1-209 32-265 (333)
81 1szo_A 6-oxocamphor hydrolase; 100.0 2.7E-44 9.2E-49 369.2 20.9 237 4-291 16-254 (257)
82 2np9_A DPGC; protein inhibitor 100.0 3.4E-44 1.2E-48 388.8 20.8 246 4-292 167-440 (440)
83 3t3w_A Enoyl-COA hydratase; ss 100.0 1.8E-43 6.1E-48 367.8 22.0 204 1-208 17-225 (279)
84 2dpo_A L-gulonate 3-dehydrogen 100.0 1.9E-42 6.6E-47 366.0 25.2 245 306-551 4-256 (319)
85 2w3p_A Benzoyl-COA-dihydrodiol 100.0 1.6E-39 5.6E-44 353.8 15.5 204 3-209 20-245 (556)
86 3mog_A Probable 3-hydroxybutyr 99.9 2.6E-22 9E-27 223.4 16.3 149 422-576 324-475 (483)
87 3ctv_A HBD-10, 3-hydroxyacyl-C 99.9 1.8E-23 6.2E-28 185.4 4.4 103 478-580 3-109 (110)
88 3bf0_A Protease 4; bacterial, 99.8 1.1E-20 3.9E-25 215.6 7.8 169 12-198 300-516 (593)
89 3rst_A Signal peptide peptidas 99.8 8E-19 2.7E-23 177.9 14.8 168 12-198 2-225 (240)
90 3tri_A Pyrroline-5-carboxylate 99.8 4.5E-18 1.5E-22 177.0 16.6 189 308-522 3-206 (280)
91 2ewd_A Lactate dehydrogenase,; 99.8 3.1E-19 1E-23 189.4 7.2 203 309-547 5-237 (317)
92 3viv_A 441AA long hypothetical 99.8 4.1E-18 1.4E-22 169.8 14.7 148 12-186 7-174 (230)
93 3d1l_A Putative NADP oxidoredu 99.7 2.9E-17 1E-21 169.8 14.4 211 309-549 11-247 (266)
94 3ctv_A HBD-10, 3-hydroxyacyl-C 99.7 9.1E-18 3.1E-22 148.7 8.2 84 620-707 15-99 (110)
95 3gt0_A Pyrroline-5-carboxylate 99.7 8.6E-17 2.9E-21 164.4 16.1 188 309-522 3-204 (247)
96 3obb_A Probable 3-hydroxyisobu 99.7 1.6E-17 5.5E-22 174.0 10.6 188 307-526 2-213 (300)
97 3ggo_A Prephenate dehydrogenas 99.7 3.8E-16 1.3E-20 164.9 17.6 164 306-495 31-213 (314)
98 2h78_A Hibadh, 3-hydroxyisobut 99.7 1.1E-16 3.7E-21 168.8 13.4 192 307-526 2-213 (302)
99 4gbj_A 6-phosphogluconate dehy 99.7 6.4E-17 2.2E-21 169.5 8.9 187 309-526 6-214 (297)
100 3doj_A AT3G25530, dehydrogenas 99.7 1.6E-16 5.6E-21 167.9 10.3 191 306-525 19-230 (310)
101 3g0o_A 3-hydroxyisobutyrate de 99.6 5.3E-16 1.8E-20 163.5 13.2 191 308-525 7-218 (303)
102 3qsg_A NAD-binding phosphogluc 99.6 2E-16 7E-21 167.2 9.1 188 306-525 22-231 (312)
103 3qha_A Putative oxidoreductase 99.6 5.3E-16 1.8E-20 162.9 12.1 185 308-522 15-222 (296)
104 3pdu_A 3-hydroxyisobutyrate de 99.6 1.4E-16 4.8E-21 166.6 6.3 186 308-525 1-210 (287)
105 3pef_A 6-phosphogluconate dehy 99.6 5.3E-16 1.8E-20 162.2 10.6 187 309-525 2-210 (287)
106 2i76_A Hypothetical protein; N 99.6 9.6E-16 3.3E-20 159.3 11.0 210 309-554 3-240 (276)
107 4dll_A 2-hydroxy-3-oxopropiona 99.6 2.1E-15 7.2E-20 160.1 13.3 187 307-525 30-238 (320)
108 3dfu_A Uncharacterized protein 99.6 2.9E-15 9.8E-20 149.3 11.5 159 307-518 5-173 (232)
109 3c24_A Putative oxidoreductase 99.6 1.7E-14 5.9E-19 150.6 15.9 188 308-522 11-228 (286)
110 2izz_A Pyrroline-5-carboxylate 99.6 2E-14 6.8E-19 152.7 15.5 189 307-522 21-228 (322)
111 2y0c_A BCEC, UDP-glucose dehyd 99.6 1.4E-14 4.9E-19 161.3 13.2 205 308-522 8-257 (478)
112 1zej_A HBD-9, 3-hydroxyacyl-CO 99.6 1.8E-15 6.2E-20 157.1 5.5 94 623-718 174-275 (293)
113 4ezb_A Uncharacterized conserv 99.5 1.7E-13 5.9E-18 145.0 18.0 193 308-525 24-233 (317)
114 3l6d_A Putative oxidoreductase 99.5 3.4E-14 1.2E-18 149.8 12.4 187 307-522 8-211 (306)
115 3g79_A NDP-N-acetyl-D-galactos 99.5 4.7E-14 1.6E-18 156.0 13.9 206 307-525 17-274 (478)
116 3ktd_A Prephenate dehydrogenas 99.5 3E-14 1E-18 151.3 10.9 153 307-487 7-186 (341)
117 2f9y_B Acetyl-coenzyme A carbo 99.5 4.9E-14 1.7E-18 146.4 11.8 157 15-204 120-281 (304)
118 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 3.1E-14 1.1E-18 149.8 10.5 89 622-714 204-301 (302)
119 2uyy_A N-PAC protein; long-cha 99.5 2.7E-14 9.3E-19 151.3 9.6 189 307-522 29-235 (316)
120 1yqg_A Pyrroline-5-carboxylate 99.5 2.9E-13 1E-17 139.3 17.1 183 309-522 1-196 (263)
121 1y7o_A ATP-dependent CLP prote 99.5 9.1E-14 3.1E-18 138.1 12.5 140 27-188 53-214 (218)
122 4e21_A 6-phosphogluconate dehy 99.5 4E-14 1.4E-18 151.7 10.0 175 307-511 21-233 (358)
123 3b1f_A Putative prephenate deh 99.5 1.5E-13 5.2E-18 143.7 14.0 159 306-488 4-181 (290)
124 3cky_A 2-hydroxymethyl glutara 99.5 1.4E-13 4.8E-18 144.7 12.2 187 308-522 4-209 (301)
125 2ahr_A Putative pyrroline carb 99.5 4.3E-13 1.5E-17 137.8 15.5 185 308-522 3-197 (259)
126 4a7p_A UDP-glucose dehydrogena 99.5 6.3E-13 2.2E-17 146.1 16.0 203 309-522 9-251 (446)
127 3ojo_A CAP5O; rossmann fold, c 99.5 4.3E-13 1.5E-17 146.3 14.5 194 309-522 12-250 (431)
128 2q3e_A UDP-glucose 6-dehydroge 99.4 2.5E-13 8.6E-18 151.4 12.6 202 308-522 5-256 (467)
129 3gg2_A Sugar dehydrogenase, UD 99.4 9.4E-13 3.2E-17 145.5 16.9 203 309-522 3-247 (450)
130 3pid_A UDP-glucose 6-dehydroge 99.4 9.2E-13 3.2E-17 143.4 16.3 196 307-522 35-268 (432)
131 2ew2_A 2-dehydropantoate 2-red 99.4 2.3E-12 7.9E-17 136.1 18.9 168 308-489 3-184 (316)
132 2g5c_A Prephenate dehydrogenas 99.4 1.3E-12 4.4E-17 136.0 16.5 155 308-488 1-173 (281)
133 1vpd_A Tartronate semialdehyde 99.4 5.5E-13 1.9E-17 140.0 13.9 188 309-522 6-210 (299)
134 2gf2_A Hibadh, 3-hydroxyisobut 99.4 9E-14 3.1E-18 145.8 7.3 181 310-522 2-205 (296)
135 2f1k_A Prephenate dehydrogenas 99.4 1.4E-12 4.9E-17 135.4 16.2 155 309-488 1-167 (279)
136 1zcj_A Peroxisomal bifunctiona 99.4 2.6E-13 8.9E-18 150.9 11.0 108 463-572 331-446 (463)
137 1yb4_A Tartronic semialdehyde 99.4 2.3E-13 7.8E-18 142.6 9.3 183 308-522 3-207 (295)
138 1mv8_A GMD, GDP-mannose 6-dehy 99.4 7.1E-13 2.4E-17 146.6 13.5 198 309-522 1-245 (436)
139 4huj_A Uncharacterized protein 99.4 3.3E-13 1.1E-17 135.2 8.8 154 306-488 21-198 (220)
140 2rcy_A Pyrroline carboxylate r 99.4 1.1E-12 3.9E-17 134.8 13.0 147 308-488 4-156 (262)
141 2o3j_A UDP-glucose 6-dehydroge 99.4 1.3E-12 4.6E-17 145.8 14.5 201 306-522 7-262 (481)
142 4gwg_A 6-phosphogluconate dehy 99.4 2.2E-13 7.7E-18 150.7 6.3 192 307-522 3-221 (484)
143 3k96_A Glycerol-3-phosphate de 99.4 3.5E-12 1.2E-16 136.7 15.1 171 304-491 25-208 (356)
144 4e12_A Diketoreductase; oxidor 99.4 1.6E-13 5.6E-18 142.9 4.3 85 623-714 191-283 (283)
145 2p4q_A 6-phosphogluconate dehy 99.4 1.4E-12 4.7E-17 145.7 11.5 191 308-522 10-226 (497)
146 2zyd_A 6-phosphogluconate dehy 99.4 2.9E-12 1E-16 142.8 14.0 193 305-522 12-231 (480)
147 2iz1_A 6-phosphogluconate dehy 99.3 5.6E-12 1.9E-16 140.6 15.1 190 308-522 5-222 (474)
148 2cvz_A Dehydrogenase, 3-hydrox 99.3 2.3E-12 7.9E-17 134.5 11.2 184 308-522 1-200 (289)
149 2f9i_A Acetyl-coenzyme A carbo 99.3 5.3E-12 1.8E-16 132.3 13.7 138 26-186 139-276 (327)
150 2pv7_A T-protein [includes: ch 99.3 3.2E-12 1.1E-16 134.1 12.1 140 307-488 20-166 (298)
151 1np3_A Ketol-acid reductoisome 99.3 4.1E-12 1.4E-16 135.5 11.1 182 308-518 16-223 (338)
152 3vtf_A UDP-glucose 6-dehydroge 99.3 2.2E-11 7.5E-16 132.6 16.1 204 307-527 20-271 (444)
153 1i36_A Conserved hypothetical 99.3 1.4E-11 4.7E-16 126.9 13.7 173 310-522 2-193 (264)
154 2f9y_A Acetyl-COA carboxylase, 99.3 9.3E-12 3.2E-16 130.8 12.4 138 26-186 153-290 (339)
155 1jay_A Coenzyme F420H2:NADP+ o 99.3 1.3E-11 4.6E-16 122.5 11.4 157 309-488 1-181 (212)
156 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 3E-11 1E-15 134.7 13.7 194 309-523 2-221 (478)
157 3dtt_A NADP oxidoreductase; st 99.2 3.4E-11 1.2E-15 122.6 12.0 165 307-488 18-213 (245)
158 2pgd_A 6-phosphogluconate dehy 99.2 2.3E-11 7.7E-16 136.0 11.0 191 309-523 3-220 (482)
159 2wtb_A MFP2, fatty acid multif 99.2 1.7E-11 5.9E-16 143.0 8.8 87 622-715 495-589 (725)
160 2raf_A Putative dinucleotide-b 99.2 4.5E-11 1.5E-15 118.5 10.5 135 307-488 18-176 (209)
161 1wdk_A Fatty oxidation complex 99.2 1.2E-11 4E-16 144.4 6.6 87 623-715 498-593 (715)
162 2hjr_A Malate dehydrogenase; m 99.2 2.8E-11 9.4E-16 128.3 8.5 122 309-444 15-155 (328)
163 2vns_A Metalloreductase steap3 99.2 1.9E-11 6.5E-16 121.8 6.7 149 307-488 27-194 (215)
164 1evy_A Glycerol-3-phosphate de 99.2 4.1E-11 1.4E-15 129.5 9.9 170 308-490 15-201 (366)
165 1dlj_A UDP-glucose dehydrogena 99.2 2.1E-10 7.3E-15 125.2 15.2 200 309-522 1-239 (402)
166 3zwc_A Peroxisomal bifunctiona 99.2 5.6E-11 1.9E-15 138.0 10.6 120 465-586 612-739 (742)
167 3k6j_A Protein F01G10.3, confi 99.1 1.5E-11 5.3E-16 134.7 4.9 90 490-579 355-452 (460)
168 1t2d_A LDH-P, L-lactate dehydr 99.1 6.6E-11 2.2E-15 125.0 8.2 124 307-444 3-150 (322)
169 1x0v_A GPD-C, GPDH-C, glycerol 99.1 8.9E-11 3.1E-15 126.2 8.4 171 307-491 7-201 (354)
170 3fr7_A Putative ketol-acid red 99.1 1.6E-10 5.5E-15 124.9 9.8 154 308-484 54-232 (525)
171 1ks9_A KPA reductase;, 2-dehyd 99.1 6.8E-11 2.3E-15 123.2 6.7 168 309-499 1-179 (291)
172 1pzg_A LDH, lactate dehydrogen 99.1 1E-10 3.6E-15 124.0 7.4 123 308-444 9-156 (331)
173 1z82_A Glycerol-3-phosphate de 99.1 8.4E-10 2.9E-14 117.6 13.2 159 309-489 15-181 (335)
174 1yj8_A Glycerol-3-phosphate de 99.0 4E-10 1.4E-14 122.1 9.9 170 308-491 21-218 (375)
175 2qyt_A 2-dehydropantoate 2-red 99.0 5.3E-10 1.8E-14 118.0 10.3 170 307-490 7-195 (317)
176 1txg_A Glycerol-3-phosphate de 99.0 5.4E-10 1.8E-14 119.0 10.4 164 309-490 1-183 (335)
177 3hwr_A 2-dehydropantoate 2-red 99.0 3.2E-09 1.1E-13 112.2 13.9 174 307-500 18-201 (318)
178 2i6t_A Ubiquitin-conjugating e 99.0 6E-10 2.1E-14 116.4 7.5 122 304-444 10-149 (303)
179 2cby_A ATP-dependent CLP prote 98.9 3.7E-09 1.3E-13 104.2 11.6 141 27-193 35-200 (208)
180 2yjz_A Metalloreductase steap4 98.5 1.1E-10 3.8E-15 114.8 0.0 148 309-488 20-182 (201)
181 1a5z_A L-lactate dehydrogenase 98.9 2.2E-09 7.7E-14 113.3 10.0 150 309-495 1-170 (319)
182 3ghy_A Ketopantoate reductase 98.9 6.1E-09 2.1E-13 110.9 12.4 169 308-492 3-202 (335)
183 1ur5_A Malate dehydrogenase; o 98.9 2.9E-09 9.8E-14 111.9 8.6 99 309-420 3-116 (309)
184 3hn2_A 2-dehydropantoate 2-red 98.9 2.4E-08 8.2E-13 105.2 15.4 175 309-499 3-189 (312)
185 2v6b_A L-LDH, L-lactate dehydr 98.8 6.7E-09 2.3E-13 108.9 7.2 120 309-444 1-138 (304)
186 2w2k_A D-mandelate dehydrogena 98.7 5.5E-09 1.9E-13 111.5 5.3 117 309-449 164-285 (348)
187 3i83_A 2-dehydropantoate 2-red 98.7 4.7E-08 1.6E-12 103.4 12.2 172 309-497 3-189 (320)
188 2d4a_B Malate dehydrogenase; a 98.7 2.1E-08 7.2E-13 105.1 8.7 120 310-444 1-140 (308)
189 2gcg_A Glyoxylate reductase/hy 98.7 5.5E-09 1.9E-13 110.8 4.3 117 309-450 156-276 (330)
190 3tl2_A Malate dehydrogenase; c 98.7 3.1E-08 1E-12 103.9 9.6 107 304-423 4-127 (315)
191 1hyh_A L-hicdh, L-2-hydroxyiso 98.7 8.1E-08 2.8E-12 101.0 11.8 99 308-421 1-120 (309)
192 3ldh_A Lactate dehydrogenase; 98.6 2.5E-08 8.6E-13 104.6 6.8 103 306-422 19-137 (330)
193 2dbq_A Glyoxylate reductase; D 98.6 7E-09 2.4E-13 110.1 2.6 116 308-449 150-269 (334)
194 3p7m_A Malate dehydrogenase; p 98.6 4.3E-08 1.5E-12 103.1 8.4 124 306-444 3-146 (321)
195 3gvi_A Malate dehydrogenase; N 98.6 6.1E-08 2.1E-12 101.9 9.2 104 306-422 5-123 (324)
196 1guz_A Malate dehydrogenase; o 98.6 1.3E-07 4.5E-12 99.3 11.5 100 309-421 1-116 (310)
197 3ba1_A HPPR, hydroxyphenylpyru 98.6 1.4E-08 4.7E-13 107.4 3.5 111 309-448 165-279 (333)
198 2d0i_A Dehydrogenase; structur 98.6 1.7E-08 5.8E-13 107.0 3.9 113 309-448 147-263 (333)
199 1lld_A L-lactate dehydrogenase 98.6 1.5E-07 5E-12 99.5 10.7 107 308-428 7-129 (319)
200 1ldn_A L-lactate dehydrogenase 98.6 5.6E-08 1.9E-12 102.4 7.1 111 307-433 5-131 (316)
201 3c7a_A Octopine dehydrogenase; 98.6 6.5E-08 2.2E-12 105.7 7.7 106 309-427 3-120 (404)
202 1bg6_A N-(1-D-carboxylethyl)-L 98.6 1.4E-07 4.9E-12 101.1 9.8 103 308-422 4-108 (359)
203 1obb_A Maltase, alpha-glucosid 98.6 2.2E-07 7.6E-12 102.3 11.4 77 308-396 3-86 (480)
204 3ado_A Lambda-crystallin; L-gu 98.5 1E-07 3.6E-12 99.6 7.3 91 621-715 191-288 (319)
205 3gvx_A Glycerate dehydrogenase 98.5 3.2E-08 1.1E-12 102.3 1.9 124 309-461 123-255 (290)
206 1ygy_A PGDH, D-3-phosphoglycer 98.5 5.7E-08 2E-12 109.5 3.5 149 309-483 143-308 (529)
207 2f6i_A ATP-dependent CLP prote 98.4 1E-06 3.5E-11 86.9 11.7 136 27-186 47-203 (215)
208 1gdh_A D-glycerate dehydrogena 98.4 2.2E-07 7.4E-12 97.9 7.1 102 309-435 147-252 (320)
209 1oju_A MDH, malate dehydrogena 98.4 5.9E-07 2E-11 93.1 10.1 102 309-423 1-118 (294)
210 3qwd_A ATP-dependent CLP prote 98.4 1.9E-06 6.6E-11 83.9 12.6 137 27-187 35-193 (203)
211 3ego_A Probable 2-dehydropanto 98.4 8.3E-07 2.8E-11 93.1 10.6 110 309-436 3-113 (307)
212 1yg6_A ATP-dependent CLP prote 98.4 4.7E-07 1.6E-11 88.0 7.4 134 27-186 34-191 (193)
213 3g17_A Similar to 2-dehydropan 98.4 4.6E-08 1.6E-12 102.1 -0.1 163 309-500 3-173 (294)
214 3evt_A Phosphoglycerate dehydr 98.3 2.5E-07 8.5E-12 97.3 4.9 113 309-447 138-254 (324)
215 4fgw_A Glycerol-3-phosphate de 98.3 7.1E-08 2.4E-12 103.4 0.6 110 309-427 35-155 (391)
216 3nep_X Malate dehydrogenase; h 98.3 8.2E-07 2.8E-11 92.9 8.6 102 309-423 1-118 (314)
217 4dgs_A Dehydrogenase; structur 98.3 1.8E-06 6.1E-11 91.2 11.0 111 309-448 172-286 (340)
218 1wwk_A Phosphoglycerate dehydr 98.3 7.3E-07 2.5E-11 93.3 7.9 114 309-448 143-260 (307)
219 3pqe_A L-LDH, L-lactate dehydr 98.3 8.8E-07 3E-11 93.2 8.5 104 305-423 2-122 (326)
220 3jtm_A Formate dehydrogenase, 98.3 3.3E-07 1.1E-11 97.3 4.8 104 309-436 165-271 (351)
221 4aj2_A L-lactate dehydrogenase 98.3 6.2E-07 2.1E-11 94.4 6.7 103 306-422 17-135 (331)
222 3fef_A Putative glucosidase LP 98.3 7.6E-07 2.6E-11 97.3 7.5 73 308-396 5-84 (450)
223 3gg9_A D-3-phosphoglycerate de 98.3 7.6E-07 2.6E-11 94.7 7.3 114 309-447 161-278 (352)
224 1u8x_X Maltose-6'-phosphate gl 98.3 2.1E-06 7.2E-11 94.7 10.9 100 309-421 29-169 (472)
225 1qp8_A Formate dehydrogenase; 98.3 1.1E-06 3.9E-11 91.6 8.2 109 309-447 125-237 (303)
226 2ekl_A D-3-phosphoglycerate de 98.3 2.5E-07 8.5E-12 97.2 2.5 102 309-436 143-247 (313)
227 1tg6_A Putative ATP-dependent 98.2 3.5E-06 1.2E-10 85.4 10.7 136 27-187 90-248 (277)
228 3k5p_A D-3-phosphoglycerate de 98.2 1.4E-06 4.8E-11 94.1 7.8 100 309-436 157-259 (416)
229 2w3p_A Benzoyl-COA-dihydrodiol 98.2 8.6E-06 3E-10 89.3 13.7 201 3-211 265-500 (556)
230 1sc6_A PGDH, D-3-phosphoglycer 98.2 7.5E-07 2.6E-11 96.5 4.9 100 309-436 146-248 (404)
231 2cuk_A Glycerate dehydrogenase 98.2 1.4E-06 4.8E-11 91.2 6.8 109 309-448 145-256 (311)
232 4hy3_A Phosphoglycerate oxidor 98.2 2.6E-06 8.9E-11 90.7 8.8 137 309-471 177-325 (365)
233 2nac_A NAD-dependent formate d 98.2 9.5E-07 3.3E-11 95.0 5.4 103 309-436 192-298 (393)
234 3hg7_A D-isomer specific 2-hyd 98.2 5E-07 1.7E-11 94.8 2.8 127 309-461 141-279 (324)
235 4g2n_A D-isomer specific 2-hyd 98.2 7.7E-07 2.7E-11 94.2 3.7 102 309-436 174-278 (345)
236 3p2l_A ATP-dependent CLP prote 98.1 3.3E-06 1.1E-10 82.2 7.6 137 27-189 38-199 (201)
237 2g76_A 3-PGDH, D-3-phosphoglyc 98.1 1.2E-06 4.2E-11 92.4 4.6 101 309-435 166-269 (335)
238 2x0j_A Malate dehydrogenase; o 98.1 5.2E-06 1.8E-10 85.7 9.0 103 309-424 1-119 (294)
239 2pi1_A D-lactate dehydrogenase 98.1 9.3E-07 3.2E-11 93.4 3.2 101 309-436 142-245 (334)
240 3d0o_A L-LDH 1, L-lactate dehy 98.1 1.2E-05 4.2E-10 84.4 11.7 109 308-432 6-130 (317)
241 4e5n_A Thermostable phosphite 98.1 4.9E-07 1.7E-11 95.5 1.0 102 309-435 146-250 (330)
242 3fi9_A Malate dehydrogenase; s 98.1 3.2E-06 1.1E-10 89.4 6.4 96 307-417 7-120 (343)
243 3pp8_A Glyoxylate/hydroxypyruv 98.1 3.9E-07 1.3E-11 95.4 -0.6 101 309-435 140-243 (315)
244 3vku_A L-LDH, L-lactate dehydr 98.1 5.1E-06 1.7E-10 87.2 7.3 100 307-422 8-124 (326)
245 1mx3_A CTBP1, C-terminal bindi 98.0 1.4E-06 4.9E-11 92.4 3.1 102 309-435 169-273 (347)
246 2j6i_A Formate dehydrogenase; 98.0 1.3E-06 4.5E-11 93.4 2.7 104 309-436 165-272 (364)
247 2dpo_A L-gulonate 3-dehydrogen 98.0 7.4E-06 2.5E-10 86.0 7.9 63 623-687 193-255 (319)
248 1y6j_A L-lactate dehydrogenase 98.0 3.8E-06 1.3E-10 88.3 5.6 119 308-444 7-147 (318)
249 1j4a_A D-LDH, D-lactate dehydr 98.0 2.3E-06 8E-11 90.5 4.0 101 309-436 147-250 (333)
250 2i99_A MU-crystallin homolog; 98.0 4.2E-06 1.4E-10 87.8 5.7 89 309-424 136-227 (312)
251 3llv_A Exopolyphosphatase-rela 98.0 2.3E-05 7.8E-10 71.7 10.0 104 307-428 5-109 (141)
252 1s6y_A 6-phospho-beta-glucosid 98.0 1.8E-05 6E-10 86.9 10.7 100 309-421 8-150 (450)
253 2yq5_A D-isomer specific 2-hyd 98.0 1.2E-06 4E-11 92.7 1.1 111 309-447 149-263 (343)
254 1lss_A TRK system potassium up 98.0 4.3E-05 1.5E-09 69.4 11.5 97 309-422 5-102 (140)
255 1pix_A Glutaconyl-COA decarbox 98.0 3.4E-05 1.1E-09 86.6 12.0 160 25-204 118-286 (587)
256 1ez4_A Lactate dehydrogenase; 97.9 1.9E-05 6.5E-10 82.9 8.1 106 309-432 6-128 (318)
257 3oet_A Erythronate-4-phosphate 97.9 2.1E-06 7.4E-11 91.5 0.6 112 309-449 120-239 (381)
258 2xxj_A L-LDH, L-lactate dehydr 97.9 2.1E-05 7.3E-10 82.2 7.8 107 309-432 1-123 (310)
259 2zqz_A L-LDH, L-lactate dehydr 97.9 2.1E-05 7.1E-10 82.8 7.7 107 308-432 9-132 (326)
260 1dxy_A D-2-hydroxyisocaproate 97.8 3.4E-06 1.2E-10 89.2 1.3 100 309-436 146-248 (333)
261 2o4c_A Erythronate-4-phosphate 97.8 3.4E-06 1.2E-10 90.2 1.0 110 309-447 117-234 (380)
262 3oj0_A Glutr, glutamyl-tRNA re 97.8 8.4E-06 2.9E-10 75.1 3.0 69 309-398 22-91 (144)
263 3fwz_A Inner membrane protein 97.7 0.00015 5E-09 66.3 10.5 96 309-420 8-103 (140)
264 3ic5_A Putative saccharopine d 97.7 5.2E-05 1.8E-09 66.6 7.0 40 308-347 5-45 (118)
265 2hk9_A Shikimate dehydrogenase 97.7 2.1E-05 7.3E-10 80.9 5.1 91 309-424 130-222 (275)
266 1y81_A Conserved hypothetical 97.7 9.4E-05 3.2E-09 67.5 8.6 86 308-426 14-104 (138)
267 1xdw_A NAD+-dependent (R)-2-hy 97.7 4.6E-06 1.6E-10 88.2 -0.3 100 309-436 147-249 (331)
268 4gm2_A ATP-dependent CLP prote 97.7 0.00023 7.8E-09 68.9 11.6 143 27-187 36-205 (205)
269 3c85_A Putative glutathione-re 97.7 0.00012 4.2E-09 70.1 9.8 39 309-347 40-79 (183)
270 3bf0_A Protease 4; bacterial, 97.7 0.00016 5.4E-09 82.4 12.0 144 32-194 71-271 (593)
271 3d4o_A Dipicolinate synthase s 97.6 0.00011 3.8E-09 76.2 8.5 87 309-422 156-243 (293)
272 2hmt_A YUAA protein; RCK, KTN, 97.6 0.00013 4.4E-09 66.5 8.0 39 308-346 6-44 (144)
273 2rir_A Dipicolinate synthase, 97.6 5.7E-05 1.9E-09 78.7 5.6 87 309-422 158-245 (300)
274 2duw_A Putative COA-binding pr 97.6 0.00011 3.7E-09 67.8 6.9 101 309-443 14-122 (145)
275 1o6z_A MDH, malate dehydrogena 97.5 0.00018 6E-09 75.0 8.9 107 309-432 1-126 (303)
276 2g1u_A Hypothetical protein TM 97.5 0.00012 4.1E-09 68.2 6.9 38 309-346 20-57 (155)
277 2d5c_A AROE, shikimate 5-dehyd 97.5 0.00013 4.5E-09 74.4 7.4 64 310-398 118-182 (263)
278 1mld_A Malate dehydrogenase; o 97.5 0.00031 1.1E-08 73.5 10.4 101 309-430 1-122 (314)
279 1smk_A Malate dehydrogenase, g 97.5 0.00023 8E-09 74.9 8.7 102 308-430 8-130 (326)
280 2f9i_B Acetyl-coenzyme A carbo 97.4 0.0026 9E-08 65.0 15.2 150 20-199 127-279 (285)
281 3d64_A Adenosylhomocysteinase; 97.4 8.9E-05 3E-09 81.7 4.4 88 309-425 278-366 (494)
282 1v8b_A Adenosylhomocysteinase; 97.4 7.8E-05 2.7E-09 81.8 3.8 88 309-425 258-346 (479)
283 1up7_A 6-phospho-beta-glucosid 97.4 0.00052 1.8E-08 74.5 10.0 73 308-395 2-81 (417)
284 3l4b_C TRKA K+ channel protien 97.3 0.00087 3E-08 66.1 10.7 95 309-420 1-97 (218)
285 3n6r_B Propionyl-COA carboxyla 97.3 0.0035 1.2E-07 69.4 16.1 137 25-201 118-263 (531)
286 3ce6_A Adenosylhomocysteinase; 97.3 0.00027 9.2E-09 78.1 7.3 86 309-423 275-361 (494)
287 3q2i_A Dehydrogenase; rossmann 97.3 0.00096 3.3E-08 71.1 11.3 98 306-430 11-114 (354)
288 1b8p_A Protein (malate dehydro 97.3 0.00027 9.2E-09 74.6 6.8 100 308-421 5-131 (329)
289 3iav_A Propionyl-COA carboxyla 97.3 0.004 1.4E-07 69.0 16.0 138 25-200 110-258 (530)
290 3u95_A Glycoside hydrolase, fa 97.3 0.00041 1.4E-08 76.6 8.1 75 309-395 1-84 (477)
291 1x7d_A Ornithine cyclodeaminas 97.3 0.0004 1.4E-08 73.7 7.8 95 309-424 130-227 (350)
292 3e9m_A Oxidoreductase, GFO/IDH 97.3 0.00071 2.4E-08 71.3 9.7 100 306-431 3-107 (330)
293 3kb6_A D-lactate dehydrogenase 97.3 0.00022 7.4E-09 75.2 5.4 100 309-436 142-245 (334)
294 3uuw_A Putative oxidoreductase 97.2 0.00074 2.5E-08 70.4 8.8 98 307-431 5-106 (308)
295 3h9u_A Adenosylhomocysteinase; 97.2 0.0002 6.8E-09 77.2 4.5 86 309-423 212-298 (436)
296 2dc1_A L-aspartate dehydrogena 97.2 0.00031 1.1E-08 70.3 5.4 77 310-423 2-81 (236)
297 3qy9_A DHPR, dihydrodipicolina 97.1 0.00083 2.9E-08 67.3 7.9 86 307-428 2-88 (243)
298 3ulk_A Ketol-acid reductoisome 97.1 0.00071 2.4E-08 72.1 7.5 151 309-482 38-201 (491)
299 3euw_A MYO-inositol dehydrogen 97.1 0.0014 4.8E-08 69.5 10.0 96 308-430 4-104 (344)
300 3p2y_A Alanine dehydrogenase/p 97.1 0.00029 9.9E-09 74.9 4.5 104 309-423 185-302 (381)
301 1omo_A Alanine dehydrogenase; 97.1 0.00075 2.6E-08 70.9 7.6 70 309-398 126-198 (322)
302 3gvp_A Adenosylhomocysteinase 97.1 0.0015 5.1E-08 70.3 9.7 85 309-422 221-306 (435)
303 3u62_A Shikimate dehydrogenase 97.1 0.00015 5E-09 73.4 1.8 37 310-346 110-147 (253)
304 1id1_A Putative potassium chan 97.1 0.0019 6.5E-08 59.7 9.3 38 309-346 4-42 (153)
305 4dio_A NAD(P) transhydrogenase 97.1 0.00022 7.6E-09 76.5 3.2 40 309-348 191-230 (405)
306 3hdj_A Probable ornithine cycl 97.1 0.0004 1.4E-08 72.6 5.0 91 309-425 122-215 (313)
307 1on3_A Methylmalonyl-COA carbo 97.1 0.0097 3.3E-07 66.0 16.4 139 25-199 108-254 (523)
308 1tlt_A Putative oxidoreductase 97.0 0.0015 5.2E-08 68.4 9.3 97 306-430 3-104 (319)
309 1hye_A L-lactate/malate dehydr 97.0 0.0016 5.6E-08 68.0 9.3 99 309-421 1-120 (313)
310 3o8q_A Shikimate 5-dehydrogena 97.0 0.00035 1.2E-08 71.7 4.1 71 309-399 127-199 (281)
311 3n58_A Adenosylhomocysteinase; 97.0 0.00089 3E-08 72.1 7.3 88 309-426 248-336 (464)
312 2vhw_A Alanine dehydrogenase; 97.0 0.00033 1.1E-08 75.3 3.9 97 309-422 169-267 (377)
313 3hhp_A Malate dehydrogenase; M 97.0 0.0011 3.6E-08 69.2 7.5 96 309-422 1-117 (312)
314 2bzr_A Propionyl-COA carboxyla 97.0 0.014 4.7E-07 65.1 16.9 135 25-197 121-266 (548)
315 3u9r_B MCC beta, methylcrotony 97.0 0.017 5.8E-07 64.2 17.2 141 25-200 134-282 (555)
316 2egg_A AROE, shikimate 5-dehyd 97.0 0.00055 1.9E-08 71.0 5.1 40 309-348 142-182 (297)
317 4hkt_A Inositol 2-dehydrogenas 97.0 0.002 6.8E-08 67.9 9.5 96 308-431 3-103 (331)
318 3db2_A Putative NADPH-dependen 96.9 0.0022 7.6E-08 68.2 9.7 97 308-431 5-106 (354)
319 3phh_A Shikimate dehydrogenase 96.9 0.00086 2.9E-08 68.2 6.0 65 309-398 119-183 (269)
320 2eez_A Alanine dehydrogenase; 96.9 0.00072 2.5E-08 72.5 5.5 97 309-422 167-265 (369)
321 1x0u_A Hypothetical methylmalo 96.9 0.016 5.6E-07 64.2 16.5 140 25-200 104-253 (522)
322 3ezy_A Dehydrogenase; structur 96.9 0.002 6.7E-08 68.3 8.8 97 309-431 3-104 (344)
323 1xea_A Oxidoreductase, GFO/IDH 96.9 0.003 1E-07 66.2 10.1 95 309-430 3-102 (323)
324 2z2v_A Hypothetical protein PH 96.9 0.0012 4E-08 70.6 6.9 88 309-422 17-107 (365)
325 2ho3_A Oxidoreductase, GFO/IDH 96.9 0.0027 9.3E-08 66.6 9.5 95 309-430 2-101 (325)
326 3rc1_A Sugar 3-ketoreductase; 96.8 0.0026 9E-08 67.5 9.3 99 305-431 24-129 (350)
327 4h7p_A Malate dehydrogenase; s 96.8 0.0012 4.1E-08 69.6 6.3 101 309-423 25-150 (345)
328 3c1a_A Putative oxidoreductase 96.8 0.0023 7.7E-08 66.9 8.4 93 308-430 10-108 (315)
329 1npy_A Hypothetical shikimate 96.8 0.0026 8.9E-08 64.9 8.4 40 309-348 120-160 (271)
330 3cea_A MYO-inositol 2-dehydrog 96.8 0.0049 1.7E-07 65.2 10.8 97 307-430 7-110 (346)
331 1leh_A Leucine dehydrogenase; 96.8 0.002 6.7E-08 68.5 7.6 39 309-347 174-212 (364)
332 3e18_A Oxidoreductase; dehydro 96.8 0.0032 1.1E-07 67.2 9.2 97 306-431 3-105 (359)
333 1p77_A Shikimate 5-dehydrogena 96.8 0.0014 4.8E-08 67.0 6.0 40 309-348 120-159 (272)
334 1iuk_A Hypothetical protein TT 96.7 0.0035 1.2E-07 57.2 7.5 103 309-443 14-122 (140)
335 3evn_A Oxidoreductase, GFO/IDH 96.6 0.002 6.9E-08 67.8 6.5 100 306-431 3-107 (329)
336 3mz0_A Inositol 2-dehydrogenas 96.6 0.0049 1.7E-07 65.2 9.3 95 309-430 3-105 (344)
337 1nyt_A Shikimate 5-dehydrogena 96.6 0.0028 9.7E-08 64.7 7.1 40 309-348 120-159 (271)
338 2glx_A 1,5-anhydro-D-fructose 96.6 0.0063 2.2E-07 63.9 10.1 94 310-430 2-101 (332)
339 1x0u_A Hypothetical methylmalo 96.6 0.032 1.1E-06 62.0 15.7 163 21-203 332-508 (522)
340 3ec7_A Putative dehydrogenase; 96.6 0.0051 1.7E-07 65.5 9.0 99 306-430 21-126 (357)
341 3don_A Shikimate dehydrogenase 96.5 0.00038 1.3E-08 71.3 0.0 38 309-346 118-156 (277)
342 3l9w_A Glutathione-regulated p 96.5 0.0084 2.9E-07 65.0 10.4 40 309-348 5-44 (413)
343 2d59_A Hypothetical protein PH 96.5 0.012 4.2E-07 53.7 10.0 80 309-420 23-107 (144)
344 3ond_A Adenosylhomocysteinase; 96.5 0.004 1.4E-07 68.1 7.8 87 309-423 266-352 (488)
345 3jyo_A Quinate/shikimate dehyd 96.5 0.0024 8.2E-08 65.6 5.4 43 309-351 128-171 (283)
346 3m2t_A Probable dehydrogenase; 96.5 0.0035 1.2E-07 66.8 7.0 98 306-430 3-107 (359)
347 1jw9_B Molybdopterin biosynthe 96.4 0.0038 1.3E-07 62.9 6.5 33 309-341 32-65 (249)
348 3pwz_A Shikimate dehydrogenase 96.4 0.0056 1.9E-07 62.4 7.5 41 309-349 121-162 (272)
349 1gpj_A Glutamyl-tRNA reductase 96.3 0.0025 8.5E-08 69.1 4.9 70 309-399 168-239 (404)
350 1vrg_A Propionyl-COA carboxyla 96.3 0.063 2.1E-06 59.6 15.6 137 25-197 111-256 (527)
351 3bio_A Oxidoreductase, GFO/IDH 96.2 0.0063 2.2E-07 63.2 7.2 67 308-399 9-77 (304)
352 5mdh_A Malate dehydrogenase; o 96.2 0.0016 5.6E-08 68.4 2.6 98 309-420 4-126 (333)
353 3abi_A Putative uncharacterize 96.2 0.0048 1.6E-07 65.9 6.2 38 309-347 17-54 (365)
354 3fbt_A Chorismate mutase and s 96.2 0.0051 1.7E-07 63.0 5.8 39 309-347 123-162 (282)
355 1x13_A NAD(P) transhydrogenase 96.2 0.0021 7.2E-08 69.5 3.1 39 309-347 173-211 (401)
356 3ius_A Uncharacterized conserv 96.1 0.011 3.8E-07 60.3 8.4 39 308-346 5-43 (286)
357 1pjc_A Protein (L-alanine dehy 96.1 0.0031 1.1E-07 67.3 4.1 98 309-423 168-267 (361)
358 7mdh_A Protein (malate dehydro 96.1 0.011 3.7E-07 62.8 8.1 107 308-424 32-159 (375)
359 1ydw_A AX110P-like protein; st 96.1 0.021 7.1E-07 60.8 10.5 99 308-430 6-110 (362)
360 2p2s_A Putative oxidoreductase 96.1 0.018 6.1E-07 60.6 9.8 96 308-430 4-105 (336)
361 1nvt_A Shikimate 5'-dehydrogen 96.1 0.0067 2.3E-07 62.5 6.2 74 309-396 129-202 (287)
362 3upl_A Oxidoreductase; rossman 96.0 0.018 6.3E-07 62.4 9.7 153 309-487 24-190 (446)
363 1ff9_A Saccharopine reductase; 96.0 0.0032 1.1E-07 69.1 3.8 40 307-346 2-41 (450)
364 3tnl_A Shikimate dehydrogenase 96.0 0.0035 1.2E-07 65.2 3.9 41 309-349 155-199 (315)
365 3dfz_A SIRC, precorrin-2 dehyd 96.0 0.025 8.7E-07 55.6 9.8 130 309-478 32-163 (223)
366 4had_A Probable oxidoreductase 96.0 0.0083 2.8E-07 63.5 6.8 75 305-401 20-100 (350)
367 3r6d_A NAD-dependent epimerase 96.0 0.0092 3.1E-07 58.5 6.6 39 308-346 5-46 (221)
368 3ohs_X Trans-1,2-dihydrobenzen 96.0 0.02 6.7E-07 60.2 9.5 97 309-431 3-106 (334)
369 3tum_A Shikimate dehydrogenase 95.9 0.017 5.7E-07 58.7 8.0 70 309-396 126-196 (269)
370 1l7d_A Nicotinamide nucleotide 95.9 0.0042 1.4E-07 66.8 3.8 39 309-347 173-211 (384)
371 1h6d_A Precursor form of gluco 95.8 0.031 1E-06 61.1 10.6 102 306-430 81-189 (433)
372 4ina_A Saccharopine dehydrogen 95.8 0.015 5E-07 63.0 7.8 43 308-350 1-46 (405)
373 2aef_A Calcium-gated potassium 95.8 0.01 3.5E-07 59.0 6.0 39 308-347 9-47 (234)
374 3e8x_A Putative NAD-dependent 95.8 0.047 1.6E-06 53.9 10.8 39 308-346 21-60 (236)
375 3u3x_A Oxidoreductase; structu 95.7 0.062 2.1E-06 57.1 12.3 97 309-431 27-128 (361)
376 3h2s_A Putative NADH-flavin re 95.7 0.0034 1.2E-07 61.6 2.1 38 309-346 1-39 (224)
377 3gdo_A Uncharacterized oxidore 95.6 0.01 3.5E-07 63.2 5.6 70 307-401 4-79 (358)
378 3e82_A Putative oxidoreductase 95.6 0.0096 3.3E-07 63.5 5.3 70 307-401 6-81 (364)
379 2axq_A Saccharopine dehydrogen 95.6 0.0087 3E-07 65.9 4.9 41 307-347 22-63 (467)
380 3t4e_A Quinate/shikimate dehyd 95.5 0.015 5.2E-07 60.3 6.2 40 309-348 149-192 (312)
381 4a26_A Putative C-1-tetrahydro 95.5 0.011 3.7E-07 60.5 4.9 74 309-424 166-240 (300)
382 4g65_A TRK system potassium up 95.5 0.0088 3E-07 65.9 4.6 40 309-348 4-43 (461)
383 2b0j_A 5,10-methenyltetrahydro 95.5 0.13 4.5E-06 51.2 12.3 109 376-487 129-242 (358)
384 1vrg_A Propionyl-COA carboxyla 95.5 0.13 4.4E-06 57.1 13.9 163 21-203 337-513 (527)
385 3ew7_A LMO0794 protein; Q8Y8U8 95.5 0.018 6.2E-07 56.0 6.4 38 309-346 1-39 (221)
386 3gf3_A Glutaconyl-COA decarbox 95.4 0.21 7.4E-06 55.8 15.5 162 25-202 119-287 (588)
387 3ngx_A Bifunctional protein fo 95.4 0.0078 2.7E-07 60.7 3.5 72 309-424 151-223 (276)
388 1f06_A MESO-diaminopimelate D- 95.4 0.0097 3.3E-07 62.3 4.5 65 309-400 4-71 (320)
389 1zud_1 Adenylyltransferase THI 95.4 0.039 1.3E-06 55.4 8.7 33 309-341 29-62 (251)
390 2ixa_A Alpha-N-acetylgalactosa 95.4 0.049 1.7E-06 59.6 10.2 78 306-400 18-104 (444)
391 1a4i_A Methylenetetrahydrofola 95.2 0.017 5.8E-07 59.0 5.2 72 309-424 166-238 (301)
392 1y7t_A Malate dehydrogenase; N 95.2 0.025 8.5E-07 59.3 6.7 33 309-341 5-45 (327)
393 3fhl_A Putative oxidoreductase 95.2 0.018 6E-07 61.4 5.6 97 306-431 3-105 (362)
394 2yyy_A Glyceraldehyde-3-phosph 95.2 0.072 2.5E-06 56.0 10.1 109 308-425 2-115 (343)
395 3btv_A Galactose/lactose metab 95.1 0.064 2.2E-06 58.6 10.0 74 307-400 19-102 (438)
396 3moi_A Probable dehydrogenase; 95.1 0.044 1.5E-06 58.8 8.6 95 309-430 3-103 (387)
397 2bzr_A Propionyl-COA carboxyla 95.1 0.27 9.3E-06 54.7 15.0 161 21-201 354-532 (548)
398 3qvo_A NMRA family protein; st 95.1 0.0075 2.5E-07 59.9 2.2 40 305-344 20-61 (236)
399 4f3y_A DHPR, dihydrodipicolina 95.1 0.021 7.3E-07 58.0 5.6 101 306-428 5-109 (272)
400 3dhn_A NAD-dependent epimerase 95.1 0.011 3.7E-07 58.0 3.4 37 308-344 4-41 (227)
401 3eag_A UDP-N-acetylmuramate:L- 95.0 0.039 1.3E-06 57.7 7.6 35 307-341 3-38 (326)
402 1dih_A Dihydrodipicolinate red 95.0 0.035 1.2E-06 56.5 6.9 36 307-342 4-42 (273)
403 1pix_A Glutaconyl-COA decarbox 95.0 0.13 4.3E-06 57.8 11.9 158 26-204 385-563 (587)
404 1edz_A 5,10-methylenetetrahydr 95.0 0.019 6.5E-07 59.5 4.9 91 309-426 178-278 (320)
405 3fpf_A Mtnas, putative unchara 94.9 0.15 5.1E-06 52.3 11.3 95 309-422 124-221 (298)
406 3p2o_A Bifunctional protein fo 94.9 0.02 6.7E-07 58.1 4.6 72 309-424 161-233 (285)
407 1lu9_A Methylene tetrahydromet 94.9 0.04 1.4E-06 56.6 7.1 41 309-349 120-161 (287)
408 3dty_A Oxidoreductase, GFO/IDH 94.8 0.065 2.2E-06 57.7 9.0 76 306-401 10-99 (398)
409 1on3_A Methylmalonyl-COA carbo 94.8 0.19 6.5E-06 55.7 12.7 163 21-203 333-509 (523)
410 4gqa_A NAD binding oxidoreduct 94.8 0.024 8.1E-07 61.5 5.5 95 310-430 28-135 (412)
411 1zh8_A Oxidoreductase; TM0312, 94.8 0.073 2.5E-06 56.0 9.1 96 308-430 18-121 (340)
412 3n6r_B Propionyl-COA carboxyla 94.8 0.32 1.1E-05 53.7 14.3 161 21-201 345-515 (531)
413 3l07_A Bifunctional protein fo 94.7 0.022 7.7E-07 57.7 4.6 72 309-424 162-234 (285)
414 1b0a_A Protein (fold bifunctio 94.7 0.014 4.8E-07 59.2 3.1 72 309-424 160-232 (288)
415 3k8x_A Acetyl-COA carboxylase; 94.6 0.082 2.8E-06 60.2 9.3 81 97-202 245-333 (758)
416 3iav_A Propionyl-COA carboxyla 94.6 0.58 2E-05 51.7 15.9 162 21-203 339-516 (530)
417 3kux_A Putative oxidoreductase 94.6 0.03 1E-06 59.3 5.4 69 308-401 7-81 (352)
418 4b4o_A Epimerase family protei 94.5 0.03 1E-06 57.5 5.0 34 309-342 1-35 (298)
419 3v5n_A Oxidoreductase; structu 94.4 0.043 1.5E-06 59.6 6.3 98 308-430 37-149 (417)
420 3h8v_A Ubiquitin-like modifier 94.4 0.032 1.1E-06 57.3 4.9 33 309-341 37-70 (292)
421 4a5o_A Bifunctional protein fo 94.4 0.027 9.3E-07 57.1 4.3 72 309-424 162-234 (286)
422 2c2x_A Methylenetetrahydrofola 94.4 0.026 9E-07 57.0 4.1 71 309-423 159-232 (281)
423 3l6e_A Oxidoreductase, short-c 94.4 0.031 1.1E-06 55.4 4.8 42 308-349 3-45 (235)
424 2nvw_A Galactose/lactose metab 94.4 0.09 3.1E-06 58.1 8.8 74 307-400 38-121 (479)
425 2vt3_A REX, redox-sensing tran 94.3 0.009 3.1E-07 58.5 0.6 78 309-411 86-167 (215)
426 4gmf_A Yersiniabactin biosynth 94.3 0.039 1.3E-06 58.8 5.6 68 309-400 8-79 (372)
427 1y1p_A ARII, aldehyde reductas 94.2 0.18 6E-06 52.5 10.5 40 308-347 11-51 (342)
428 4hv4_A UDP-N-acetylmuramate--L 94.2 0.11 3.9E-06 57.5 9.4 38 305-342 19-57 (494)
429 4g81_D Putative hexonate dehyd 94.2 0.037 1.3E-06 55.7 4.9 44 309-352 9-54 (255)
430 2gas_A Isoflavone reductase; N 94.2 0.049 1.7E-06 56.0 6.0 34 308-341 2-36 (307)
431 3dqp_A Oxidoreductase YLBE; al 94.2 0.033 1.1E-06 54.3 4.4 35 310-344 2-37 (219)
432 3c1o_A Eugenol synthase; pheny 94.2 0.06 2.1E-06 55.8 6.7 34 308-341 4-38 (321)
433 4fn4_A Short chain dehydrogena 94.2 0.037 1.3E-06 55.7 4.7 43 309-351 7-51 (254)
434 4fb5_A Probable oxidoreductase 94.1 0.043 1.5E-06 58.7 5.4 70 310-401 27-108 (393)
435 1nvm_B Acetaldehyde dehydrogen 94.0 0.074 2.5E-06 55.2 6.9 36 308-343 4-42 (312)
436 1cf2_P Protein (glyceraldehyde 94.0 0.12 4.1E-06 54.2 8.5 37 309-345 2-40 (337)
437 3l77_A Short-chain alcohol deh 93.9 0.088 3E-06 51.9 6.9 44 308-351 2-46 (235)
438 2r6j_A Eugenol synthase 1; phe 93.9 0.046 1.6E-06 56.7 5.1 34 309-342 12-46 (318)
439 3f4l_A Putative oxidoreductase 93.9 0.042 1.4E-06 58.0 4.7 70 309-401 3-79 (345)
440 3ff4_A Uncharacterized protein 93.9 0.1 3.5E-06 46.0 6.5 81 308-420 4-88 (122)
441 3dr3_A N-acetyl-gamma-glutamyl 93.9 0.077 2.6E-06 55.6 6.6 100 308-428 4-111 (337)
442 3i6i_A Putative leucoanthocyan 93.8 0.1 3.4E-06 54.8 7.6 36 306-341 8-44 (346)
443 3ruf_A WBGU; rossmann fold, UD 93.8 0.044 1.5E-06 57.6 4.8 35 308-342 25-60 (351)
444 1qyc_A Phenylcoumaran benzylic 93.7 0.071 2.4E-06 54.8 6.0 34 308-341 4-38 (308)
445 3lk7_A UDP-N-acetylmuramoylala 93.6 0.22 7.5E-06 54.5 10.0 35 308-342 9-43 (451)
446 3u9r_B MCC beta, methylcrotony 93.5 0.93 3.2E-05 50.3 14.7 158 26-203 366-543 (555)
447 2z1n_A Dehydrogenase; reductas 93.5 0.094 3.2E-06 52.6 6.3 41 309-349 8-49 (260)
448 3kkj_A Amine oxidase, flavin-c 93.5 0.033 1.1E-06 55.0 2.9 32 310-341 4-35 (336)
449 2wsb_A Galactitol dehydrogenas 93.5 0.055 1.9E-06 53.9 4.6 40 309-348 12-52 (254)
450 3ai3_A NADPH-sorbose reductase 93.5 0.1 3.6E-06 52.4 6.6 42 309-350 8-50 (263)
451 2czc_A Glyceraldehyde-3-phosph 93.5 0.1 3.6E-06 54.7 6.8 86 309-401 3-93 (334)
452 3f1l_A Uncharacterized oxidore 93.5 0.1 3.6E-06 52.1 6.6 43 309-351 13-56 (252)
453 3ged_A Short-chain dehydrogena 93.4 0.21 7.3E-06 49.8 8.8 39 308-346 1-41 (247)
454 4dry_A 3-oxoacyl-[acyl-carrier 93.4 0.089 3E-06 53.7 6.0 42 310-351 35-77 (281)
455 3tfo_A Putative 3-oxoacyl-(acy 93.3 0.068 2.3E-06 54.1 5.0 43 309-351 5-48 (264)
456 3oa2_A WBPB; oxidoreductase, s 93.3 0.056 1.9E-06 56.4 4.5 36 308-343 3-40 (318)
457 2ehd_A Oxidoreductase, oxidore 93.2 0.045 1.5E-06 54.0 3.4 39 309-347 6-45 (234)
458 2x24_A Acetyl-COA carboxylase; 93.2 0.22 7.6E-06 57.3 9.4 69 97-187 258-334 (793)
459 1qyd_A Pinoresinol-lariciresin 93.2 0.098 3.4E-06 53.8 6.1 34 308-341 4-38 (313)
460 1c1d_A L-phenylalanine dehydro 93.2 0.13 4.6E-06 54.0 7.1 35 309-343 176-210 (355)
461 3e5r_O PP38, glyceraldehyde-3- 93.2 0.096 3.3E-06 54.9 6.0 30 309-338 4-34 (337)
462 3oqb_A Oxidoreductase; structu 93.1 0.064 2.2E-06 57.4 4.7 73 307-401 5-97 (383)
463 3o9z_A Lipopolysaccaride biosy 93.1 0.16 5.3E-06 52.8 7.4 36 308-343 3-40 (312)
464 3asu_A Short-chain dehydrogena 93.1 0.11 3.8E-06 51.8 6.1 39 310-348 2-41 (248)
465 4hb9_A Similarities with proba 93.1 0.039 1.3E-06 59.1 2.9 34 309-342 2-35 (412)
466 4e6p_A Probable sorbitol dehyd 93.1 0.066 2.2E-06 53.8 4.4 41 309-349 9-50 (259)
467 2ejw_A HDH, homoserine dehydro 93.0 0.083 2.9E-06 55.2 5.2 64 309-399 4-78 (332)
468 1vl8_A Gluconate 5-dehydrogena 93.0 0.13 4.5E-06 51.9 6.6 41 309-349 22-63 (267)
469 1p9l_A Dihydrodipicolinate red 93.0 0.23 7.8E-06 49.5 8.1 31 310-340 2-35 (245)
470 3pk0_A Short-chain dehydrogena 93.0 0.072 2.5E-06 53.7 4.5 41 309-349 11-52 (262)
471 3do5_A HOM, homoserine dehydro 92.9 0.041 1.4E-06 57.5 2.6 36 308-343 2-47 (327)
472 3ioy_A Short-chain dehydrogena 92.9 0.13 4.3E-06 53.6 6.4 43 309-351 9-52 (319)
473 2nwq_A Probable short-chain de 92.9 0.11 3.6E-06 52.8 5.7 41 309-349 22-63 (272)
474 1geg_A Acetoin reductase; SDR 92.9 0.085 2.9E-06 52.9 4.9 41 309-349 3-44 (256)
475 1uls_A Putative 3-oxoacyl-acyl 92.9 0.078 2.7E-06 52.8 4.6 39 309-347 6-45 (245)
476 4h3v_A Oxidoreductase domain p 92.9 0.064 2.2E-06 57.2 4.2 70 310-401 8-89 (390)
477 3qiv_A Short-chain dehydrogena 92.8 0.11 3.8E-06 51.8 5.5 43 309-351 10-53 (253)
478 3gem_A Short chain dehydrogena 92.7 0.059 2E-06 54.3 3.5 37 309-345 28-65 (260)
479 2pnf_A 3-oxoacyl-[acyl-carrier 92.7 0.13 4.5E-06 50.8 6.0 41 309-349 8-49 (248)
480 1c0p_A D-amino acid oxidase; a 92.7 0.068 2.3E-06 56.5 4.0 34 308-341 6-39 (363)
481 1lnq_A MTHK channels, potassiu 92.7 0.093 3.2E-06 55.0 5.1 36 309-345 116-151 (336)
482 3oh8_A Nucleoside-diphosphate 92.7 0.096 3.3E-06 58.5 5.4 36 308-343 147-183 (516)
483 1yb1_A 17-beta-hydroxysteroid 92.7 0.11 3.9E-06 52.4 5.6 40 309-348 32-72 (272)
484 3ucx_A Short chain dehydrogena 92.7 0.12 4.1E-06 52.1 5.7 42 309-350 12-54 (264)
485 3awd_A GOX2181, putative polyo 92.7 0.1 3.5E-06 52.2 5.1 40 309-348 14-54 (260)
486 1vl6_A Malate oxidoreductase; 92.6 0.084 2.9E-06 55.9 4.5 32 309-340 193-225 (388)
487 3ftp_A 3-oxoacyl-[acyl-carrier 92.6 0.099 3.4E-06 53.0 5.0 41 310-350 29-71 (270)
488 3nyw_A Putative oxidoreductase 92.6 0.095 3.2E-06 52.4 4.8 43 309-351 8-51 (250)
489 1nff_A Putative oxidoreductase 92.6 0.075 2.5E-06 53.5 4.0 39 309-347 8-47 (260)
490 1xg5_A ARPG836; short chain de 92.6 0.098 3.3E-06 53.1 4.9 40 309-348 33-73 (279)
491 1iy8_A Levodione reductase; ox 92.6 0.11 3.6E-06 52.5 5.1 41 309-349 14-55 (267)
492 3op4_A 3-oxoacyl-[acyl-carrier 92.6 0.081 2.8E-06 52.8 4.2 40 309-348 10-50 (248)
493 2jah_A Clavulanic acid dehydro 92.6 0.1 3.5E-06 52.0 4.9 41 309-349 8-49 (247)
494 3lf2_A Short chain oxidoreduct 92.6 0.14 4.7E-06 51.7 6.0 43 309-351 9-52 (265)
495 1ys4_A Aspartate-semialdehyde 92.5 0.15 5.2E-06 53.9 6.4 101 309-426 9-117 (354)
496 3m2p_A UDP-N-acetylglucosamine 92.5 0.31 1.1E-05 50.0 8.7 36 308-343 2-38 (311)
497 3h5n_A MCCB protein; ubiquitin 92.4 0.17 5.7E-06 53.5 6.6 33 309-341 119-152 (353)
498 4fgs_A Probable dehydrogenase 92.4 0.37 1.3E-05 48.9 8.9 41 309-349 29-71 (273)
499 1w6u_A 2,4-dienoyl-COA reducta 92.4 0.17 5.9E-06 51.8 6.6 42 309-350 27-69 (302)
500 2rhc_B Actinorhodin polyketide 92.4 0.12 4.2E-06 52.4 5.3 41 309-349 23-64 (277)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=1e-133 Score=1163.97 Aligned_cols=688 Identities=34% Similarity=0.559 Sum_probs=613.4
Q ss_pred EEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHH
Q 004891 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87 (725)
Q Consensus 8 ~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 87 (725)
++. +|+|++||||||+.|+||.+|+++|.++++++++|++||+|||||.|++||+|+||+++...... ....
T Consensus 25 ~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~-------~~~~ 96 (742)
T 3zwc_A 25 LRL-PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-------LALG 96 (742)
T ss_dssp EEC-STTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC-------SHHH
T ss_pred EEe-eCCEEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh-------HHHH
Confidence 344 78999999999999999999999999999999999999999999999999999999998654322 1234
Q ss_pred HHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCC
Q 004891 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167 (725)
Q Consensus 88 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~ 167 (725)
.++ +.|.++||||||+|||+|+|||++|+|+||||||+++++|++||+++|++|++|++++|||++|..+|++|++||+
T Consensus 97 ~~~-~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~ 175 (742)
T 3zwc_A 97 SLV-DEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGK 175 (742)
T ss_dssp HHH-HHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHH-HHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCC
Confidence 566 6799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhHHHH
Q 004891 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247 (725)
Q Consensus 168 ~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 247 (725)
+++|+||+++||||+|+|.+. .+++.++|++++++++...+...+. ..........+..+....+++.+++||+.++
T Consensus 176 ~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~k~~~~~~A~~~~ 252 (742)
T 3zwc_A 176 YLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPIEPRRIFNKP--VPSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252 (742)
T ss_dssp CEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCSGGGCGGGSC--CCCCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred chhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCchhhhhhccc--ccccchhhhhHHHHHHHHhhhccchhHHHHH
Confidence 999999999999999998775 5788999999999987654433222 1122222234445555667788899999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCCCCC---CCCCCCCCcceEEEEcCCCCcHHHH
Q 004891 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT---DIGLKPRGVRKVAVIGGGLMGSGIA 324 (725)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~~~~---~~~~~~~~~~kIaVIG~G~mG~~iA 324 (725)
+++++.+...+++++++.|++.|.+++.|+++++++++|+++|+++|.+... ..+..+++|+||+|||+|+||++||
T Consensus 253 ~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA 332 (742)
T 3zwc_A 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332 (742)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998865321 2345567899999999999999999
Q ss_pred HHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCCCEEEEeccCChHHHHH
Q 004891 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404 (725)
Q Consensus 325 ~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIeavpe~~~~k~~ 404 (725)
..++++|++|+++|++++.++++.+.+.+.+++.+.++..+.. .....+++.+++++.+++||+|||||||++++|++
T Consensus 333 ~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 333 ISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHH
T ss_pred HHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHH
Confidence 9999999999999999999999999999888887776554422 22346788888999999999999999999999999
Q ss_pred HHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004891 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484 (725)
Q Consensus 405 v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v 484 (725)
+|++|++++++++|++||||+++++++++.+.+|+||+|+|||||++.+|+|||++++.|++++++.+.++.+.+||+||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCcchhhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHhhCCCC-------
Q 004891 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR------- 557 (725)
Q Consensus 485 ~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv~~~dID~~~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~------- 557 (725)
+++|+||||+||++.++++|+++++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+....++.
T Consensus 491 ~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~~~ 570 (742)
T 3zwc_A 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVR 570 (742)
T ss_dssp ECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCCTT
T ss_pred ccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhCHHHHHHHHHHHHhhCcccCccchhh
Confidence 9999999999999999999999999999999999999988999999999999999999999999876544321
Q ss_pred ----CCCcHHHHHHHHcCCCccccCceeeeccCCC--CCCCCCCchhHHHHHhhhccCCCCCCCCccccHHHHHHHHHHH
Q 004891 558 ----SFQSPLVDLLLKSGRNGKANGKGLYTYEKGS--KPKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFP 631 (725)
Q Consensus 558 ----~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 631 (725)
..+++++++|+++|++|+|||+|||+|+++. ...+|+++..++...+....+.+. .+++++|.+|++++
T Consensus 571 ~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ei~~R~l~~ 645 (742)
T 3zwc_A 571 KRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQR-----TISKEEILERCLYS 645 (742)
T ss_dssp EETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTTCSCEECCHHHHHHHHHHHHHHTCCCC-----CCCHHHHHHHHHHH
T ss_pred hcccccccHHHHHHHHCCCccccCCCeeEECCCCCCccCCCChHHHHHHHHHhhhcCCCcC-----CCCHHHHHHHHHHH
Confidence 1156799999999999999999999997643 345777777776655544333332 57899999999999
Q ss_pred HHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHHHHHcCC
Q 004891 632 VVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGI 709 (725)
Q Consensus 632 ~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~ 709 (725)
++||+++||+|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.|++|.+++|+ +|+|+++|++|+++|+
T Consensus 646 ~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~ 725 (742)
T 3zwc_A 646 LINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 725 (742)
T ss_dssp HHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999996 8999999999999986
Q ss_pred -CCCCC
Q 004891 710 -PLSAP 714 (725)
Q Consensus 710 -gf~~~ 714 (725)
+||+|
T Consensus 726 ~~f~~~ 731 (742)
T 3zwc_A 726 PPLKEW 731 (742)
T ss_dssp CCGGGH
T ss_pred Cccccc
Confidence 57877
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-125 Score=1103.61 Aligned_cols=707 Identities=58% Similarity=0.961 Sum_probs=597.8
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCC--C
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGA--G 77 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~-~F~aG~Dl~~~~~~~~~--~ 77 (725)
|+++.+.++..+++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| |+ +||+|+|++++...... .
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 82 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVK 82 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred CcCCeEEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhh
Confidence 56777899833789999999999889999999999999999999999999999999 76 99999999998542211 0
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
....+....+.++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 83 EPKAGYISIDIIT-DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp CCSSSHHHHHCCC-CCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHH-HHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0112222333444 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcC-ch--hhhhhhccCCCCChHHHHHHHHHHHHHH
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR-KP--WIRSLHRTDKLGSLSEAREVLKLARLQA 234 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (725)
+|++|++||++++|+||+++||||+|||++++.+++.++|++++..+ +. ..+. + .+..........+..++...
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~--~-~~~~~~~~~~~~~~~a~~~~ 238 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSK--T-DKLPPLGEAREILTFAKAQT 238 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGGC--C-TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhhh--c-cccCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998872 22 1210 0 01112222333566666666
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcceEEEE
Q 004891 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAVI 314 (725)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~~~~~~~~~~~~~~kIaVI 314 (725)
++..+.|||+..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++....+..+++|+||+||
T Consensus 239 ~~~~~g~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~VI 318 (725)
T 2wtb_A 239 LKRAPNMKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAII 318 (725)
T ss_dssp HHHCTTCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEEE
T ss_pred HHhccCCcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEEE
Confidence 54444599999999999999999999999999999999999999999999999999999988632113345678999999
Q ss_pred cCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCCCEEEEe
Q 004891 315 GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEA 394 (725)
Q Consensus 315 G~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIea 394 (725)
|+|.||++||..++++|++|++||++++.++++.+.+++.+++++++|.+++++.....++++.+++++.+++||+||+|
T Consensus 319 GaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIea 398 (725)
T 2wtb_A 319 GGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIEA 398 (725)
T ss_dssp CCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEEC
T ss_pred cCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEEc
Confidence 99999999999999999999999999999999988899999999999999888888888999999999889999999999
Q ss_pred ccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHH
Q 004891 395 VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMT 474 (725)
Q Consensus 395 vpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~ 474 (725)
|||+.++|+++++++.+++++++||+||||+++++++++.+.++++|+|+|||+|++.++++|+++|+.|++++++.+.+
T Consensus 399 Vpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~ 478 (725)
T 2wtb_A 399 VIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLLD 478 (725)
T ss_dssp CCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred HHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHhhC
Q 004891 475 VGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (725)
Q Consensus 475 l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv~~~dID~~~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (725)
+++.+|++|+++++.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++.+
T Consensus 479 l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vGld~~~~i~~~~~~~~ 558 (725)
T 2wtb_A 479 VGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIENF 558 (725)
T ss_dssp HHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred HHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhchHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999988
Q ss_pred CCC-CCCcHHHHHHHHcCCCccccCceeeeccCCCCCCCCCCchhHHHHHhhhccCCCCCCCCccccHHHHHHHHHHHHH
Q 004891 555 PDR-SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVV 633 (725)
Q Consensus 555 ~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 633 (725)
+++ +.| +++++|+++|++|+|||+|||+|++.....+|+++..++...+....+.+. ..++.+++++|.+|++++++
T Consensus 559 ~~~~~~~-~~l~~~v~~g~lG~k~g~GfY~y~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~r~l~~~~ 636 (725)
T 2wtb_A 559 SERTYKS-MIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVKLD-PKLANLSEKDIIEMTFFPVV 636 (725)
T ss_dssp GGGCCCC-THHHHHHTTC---------------------CCCCCTTSHHHHHHTCCSCC-CTTTTCCHHHHHHHHHHHHH
T ss_pred CCccCCh-HHHHHHHHCCCceecCCceeEeCCCCccCCCCHHHHHHHHhhhhhccccch-hhcccCCHHHHHHHHHHHHH
Confidence 876 446 999999999999999999999996322224778887776543321111100 11224688999999999999
Q ss_pred HHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHcCCCCCC
Q 004891 634 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 713 (725)
Q Consensus 634 ~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~~g~gf~~ 713 (725)
||+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+.+.+|++|.|+++|++|+++|++||.
T Consensus 637 nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~p~~~l~~~~~~g~~f~~ 716 (725)
T 2wtb_A 637 NEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSA 716 (725)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHTCCSSS
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q 004891 714 P 714 (725)
Q Consensus 714 ~ 714 (725)
.
T Consensus 717 ~ 717 (725)
T 2wtb_A 717 P 717 (725)
T ss_dssp C
T ss_pred h
Confidence 4
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=9.4e-125 Score=1097.20 Aligned_cols=695 Identities=30% Similarity=0.525 Sum_probs=616.1
Q ss_pred CCcEEEEEecCcEEEEEeCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCCC--
Q 004891 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p--~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~-~F~aG~Dl~~~~~~~~~~-- 77 (725)
.+.+.++..+++|++|||||| +.|+||.+|+++|.+++++++.|+++|+||||| |+ +||+|+|++++.......
T Consensus 5 ~~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 83 (715)
T 1wdk_A 5 GKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDA 83 (715)
T ss_dssp CSSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHH
T ss_pred CCeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHH
Confidence 356888833789999999999 589999999999999999999999999999999 77 999999999986532111
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
....+....+.++ ++|.++||||||+|||+|+|||++|+|+||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~ 162 (715)
T 1wdk_A 84 ELIAGNLEANKIF-SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVD 162 (715)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHH
Confidence 1111223345666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccC--CC-CChHHHHH-HHHHHHH-
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD--KL-GSLSEARE-VLKLARL- 232 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~--~~-~~~~~~~~-~~~~~~~- 232 (725)
+|++|++||++++|+||+++||||+|||++++.+++.++|++++....++.... +.. +. .+ ..... .+..++.
T Consensus 163 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~-~~~~~p~~~~-~~~~~~~~~~~k~~ 240 (715)
T 1wdk_A 163 NAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR-QPKLEKLKLN-AIEQMMAFETAKGF 240 (715)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH-GGGGSCCSCC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc-ccccCccccC-chhHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988621111100 100 10 01 01111 2444444
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCCCCCCCCCCCCCcceEE
Q 004891 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVA 312 (725)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~~~~~~~~~~~~~~kIa 312 (725)
..|+++++||||..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++.+. + .+++++||+
T Consensus 241 ~~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~ 318 (715)
T 1wdk_A 241 VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAA 318 (715)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEE
T ss_pred HHHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEE
Confidence 34688999999999999999999999999999999999999999999999999999999998765222 2 446789999
Q ss_pred EEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCCCEEE
Q 004891 313 VIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVI 392 (725)
Q Consensus 313 VIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVI 392 (725)
|||+|+||++||..++++|++|++||++++.++++.+.+++.+++++++|.+++++.+..+++++.+++++.+++||+||
T Consensus 319 VIGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVI 398 (715)
T 1wdk_A 319 VLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVV 398 (715)
T ss_dssp EECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEE
T ss_pred EECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEE
Confidence 99999999999999999999999999999999999889999999999999999988888888899888888899999999
Q ss_pred EeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCHHHHHHH
Q 004891 393 EAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDL 472 (725)
Q Consensus 393 eavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~ 472 (725)
+||||+.++|+++++++.+++++++||+||||+++++++++.+.++++|+|+|||+|++.++++|+++|+.|++++++.+
T Consensus 399 eaV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~ 478 (715)
T 1wdk_A 399 EAVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATT 478 (715)
T ss_dssp ECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHH
T ss_pred EcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred HHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHh
Q 004891 473 MTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDK 552 (725)
Q Consensus 473 ~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv~~~dID~~~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~ 552 (725)
.++++.+|+.|+++++.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|.+|||+.+++++.+++
T Consensus 479 ~~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vGld~~~~i~~~~~~ 558 (715)
T 1wdk_A 479 VAYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAE 558 (715)
T ss_dssp HHHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999998
Q ss_pred hCCCCCCCc--HHHHHHHHcCCCccccCceeeecc-C--CC-CCCCCCCchhHHHHHhhhccCCCCCCCCccccHHHHHH
Q 004891 553 AFPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYE-K--GS-KPKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVE 626 (725)
Q Consensus 553 ~~~~~~~~~--~~l~~~v~~g~~G~k~g~Gfy~y~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 626 (725)
.+++++.|+ +++++|+++|++|+|||+|||+|+ + ++ ...+|+++..++...+. + . ..+++++|.+
T Consensus 559 ~~~~~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y~~~~~g~~~~~~~~~~~~~~~~~~~-----~--~--~~~~~~~i~~ 629 (715)
T 1wdk_A 559 GFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVY-----E--Q--RDVTDEDIIN 629 (715)
T ss_dssp HCHHHHCCSSCCHHHHHHHTTCCBTTTTBSSSEEC-------CEECCTHHHHHHGGGCC-----C--C--CCCCHHHHHH
T ss_pred hcCCccCCChHHHHHHHHhCchhhhcCCcEEEecccCcCCCCcCCCCHHHHHHHhhhcc-----C--c--cCCCHHHHHH
Confidence 888766677 899999999999999999999996 3 22 23466666655532211 1 1 1467899999
Q ss_pred HHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHH
Q 004891 627 MILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERAT 706 (725)
Q Consensus 627 r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~~ 706 (725)
|++++++||+++|+++||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+ +.+|++|.|+++|++|++
T Consensus 630 r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~p~~~l~~~~~ 708 (715)
T 1wdk_A 630 WMMIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAKLREMAK 708 (715)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 889999999999999999
Q ss_pred cCCCCCC
Q 004891 707 KGIPLSA 713 (725)
Q Consensus 707 ~g~gf~~ 713 (725)
+|++||.
T Consensus 709 ~g~~f~~ 715 (715)
T 1wdk_A 709 NGQSFFG 715 (715)
T ss_dssp TTCCSCC
T ss_pred cCCCCCC
Confidence 9999984
No 4
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=2.8e-79 Score=670.94 Aligned_cols=413 Identities=28% Similarity=0.472 Sum_probs=363.5
Q ss_pred HHhhhhhcCCCCCC---CC-CCCCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHc
Q 004891 286 FFAQRATSKVPNVT---DI-GLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTR 361 (725)
Q Consensus 286 F~~~r~~~~~~~~~---~~-~~~~~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~ 361 (725)
|.++|..+++..+. .+ ...+++++||+|||+|+||++||..++++|++|++||++++ ++.+.+++.+++++++
T Consensus 28 ~~a~~~~~~w~~p~~~~~~~~~~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~~ 104 (460)
T 3k6j_A 28 MEAHSLAGQWSLPNDRGDHTNSEAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKSF 104 (460)
T ss_dssp HHTTCCTTSCBCSTTSCBTTSCCCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHHT
T ss_pred HhHHHhhccccCCCCccccccCCcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHHc
Confidence 34666665543221 11 23457889999999999999999999999999999999998 4566788889999999
Q ss_pred CCCCHHHHHHhhcCcccccCcccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcE
Q 004891 362 GKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRI 441 (725)
Q Consensus 362 g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ 441 (725)
|.++.++.+..+++++++++++++++||+|||||||++++|+++|++|.+.+++++||+||||+++++++++.+.+|++|
T Consensus 105 G~l~~~~~~~~~~~i~~t~dl~al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~ 184 (460)
T 3k6j_A 105 KRLNDKRIEKINANLKITSDFHKLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNL 184 (460)
T ss_dssp TSCCHHHHHHHHTTEEEESCGGGCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGE
T ss_pred CCCCHHHHHHHhcceEEeCCHHHHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcce
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHH-HcCCCHHHHHH
Q 004891 442 IGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRIDS 520 (725)
Q Consensus 442 ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~-~~Gv~~~dID~ 520 (725)
+|+|||+|++.++++||++++.|++++++.+.++++.+||+||+++|.|||++||++.++++||+.++ ++|+++++||.
T Consensus 185 iG~HffnPv~~m~LvEIv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~ 264 (460)
T 3k6j_A 185 VGIHFFNPANVIRLVEIIYGSHTSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDK 264 (460)
T ss_dssp EEEECCSSTTTCCEEEEECCSSCCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHH
T ss_pred EEEEecchhhhCCEEEEEeCCCCCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 67999999999
Q ss_pred HHHhcCCCccHHHHHHhhchHHHHHHHHHHHhhCCCCCCCcHHHHHHHHcCCCccccCceeeeccCCCC-CCCCCCchhH
Q 004891 521 AIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPI 599 (725)
Q Consensus 521 ~~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~-~~~~~~~~~~ 599 (725)
++.++|+|||||+++|++|||+.+++.+.+. ..+++++++|+++|++|+|||+|||+|+++++ +.+++++..+
T Consensus 265 a~~~~G~pmGPf~l~D~vGlD~~~~i~~~~~------~~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~~~~~~~~~~~~~ 338 (460)
T 3k6j_A 265 IITNFGFLMGPMTVADMNGFDVMEKLKKENG------LEPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEMEQI 338 (460)
T ss_dssp HHHHHTBSSCHHHHHHHHCTHHHHHHHHHSC------CCCCHHHHHHHHTTCCBGGGTBSSSEECTTTCCEECCHHHHHH
T ss_pred HHHHcCCCcCHHHHHHHhchHHHHHHHHHhc------cCchHHHHHHHHCCCCeeecCCEEEECCCCCCCCCCCHHHHHH
Confidence 9988999999999999999999999988761 13568999999999999999999999987543 4566666666
Q ss_pred HHHHhhhccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHH
Q 004891 600 IEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANY 679 (725)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~ 679 (725)
+...+....+.+ +.+++++|.+|++++++||+++||+|||+++++|||.+|++|+|||+|+||||+|+|.+|++.
T Consensus 339 ~~~~~~~~~~~~-----~~~~~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~ 413 (460)
T 3k6j_A 339 IRRVSQNAKSNI-----QIINDQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDK 413 (460)
T ss_dssp HHHC---CCCSS-----CCCSHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHH
T ss_pred HHHHHHhcCCCc-----ccCChHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHH
Confidence 543322111111 257899999999999999999999999998999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCC--CCCCHHHHHHHHcCCCCC
Q 004891 680 VYTSLKKWSQLYGNF--FKPSRFLEERATKGIPLS 712 (725)
Q Consensus 680 ~~~~~~~~~~~~~~~--~~p~~~l~~~~~~g~gf~ 712 (725)
+++.++.|++.+|++ |+|+++|++|+++|+-|-
T Consensus 414 ~~~~l~~l~~~~g~~~~~~p~~~L~~~a~~g~~~~ 448 (460)
T 3k6j_A 414 IANMLVHWSSLEPKESAYIVADALKTANVSTGSSG 448 (460)
T ss_dssp HHHHHHHHHHHCTTCGGGSCCHHHHHHC-------
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHcCCCcc
Confidence 999999999999987 999999999998887654
No 5
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=4.5e-74 Score=640.70 Aligned_cols=431 Identities=33% Similarity=0.533 Sum_probs=371.1
Q ss_pred CCHhHHHHHHHHHhhhhhcCCCCC---CCCCCCCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 275 MLDTSRGLVHVFFAQRATSKVPNV---TDIGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 275 ~s~~~~~~i~aF~~~r~~~~~~~~---~~~~~~~~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
.|++++++++.|+.+|..+|.+.. ...+..+++++||+|||+|.||++||..|+++|++|++||++++.++++.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 489999999999999999885531 11123456789999999999999999999999999999999999999998888
Q ss_pred HHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 352 ~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
++.++..+++|.++..+.+.. ....+++++.+++||+||+|||++.++|+++++++.+.+++++||+||||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~--~~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKP--KLRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC--CEEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHH--HhhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 777777766654332211111 122356677889999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHc
Q 004891 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 511 (725)
Q Consensus 432 ~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~ 511 (725)
++.+.++++++|+|||+|++.++++|+++|+.|++++++.+.++++.+|++++++++.+||++||++.++.+|++.++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHH---hhC-------CCCC-CCcHHHHHHHHcCCCccccCce
Q 004891 512 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD---KAF-------PDRS-FQSPLVDLLLKSGRNGKANGKG 580 (725)
Q Consensus 512 Gv~~~dID~~~~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~---~~~-------~~~~-~~~~~l~~~v~~g~~G~k~g~G 580 (725)
|+++++||.+++++|+|+|||+++|.+|||+.+++++.+. ..+ .+.. .+++++++|+++|++|+|||+|
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~G 318 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKG 318 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBS
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcchHHHHHHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCe
Confidence 9999999999999999999999999999999999999872 221 1111 1368999999999999999999
Q ss_pred eeeccCCCC--CCCCCCchhHHHHHhhhccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHh
Q 004891 581 LYTYEKGSK--PKPDPSVLPIIEECRRLSNIMPGGKVPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLG 658 (725)
Q Consensus 581 fy~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g 658 (725)
||+|++.++ ...++++..++..........+ ..++..+|+||++.+++|||++|+++||+++++|||.+|++|
T Consensus 319 fy~y~~~g~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G 393 (463)
T 1zcj_A 319 WYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ-----RTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHG 393 (463)
T ss_dssp SEEESSTTCSCEEECHHHHHHHHHHHHHTTCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHH
T ss_pred eccCCCCCCCCCCCCHHHHHHHHHHHHHcCCCc-----ccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhC
Confidence 999964222 2356666666544432222212 135788999999999999999999999998899999999999
Q ss_pred cCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCC--CCCCCHHHHHHHHcCCCCC
Q 004891 659 MSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPLS 712 (725)
Q Consensus 659 ~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~~~g~gf~ 712 (725)
+|||+|+||||+|+|.+|++.+++.++.|++.+++ +|+|+++|++|+++|+.|.
T Consensus 394 ~G~p~~~gGP~~~~D~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~~~~ 449 (463)
T 1zcj_A 394 YGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPL 449 (463)
T ss_dssp SCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCG
T ss_pred CCCCCCCcChHHHHHHhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCCCcc
Confidence 99999999999999999999999999999999998 8999999999999999997
No 6
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=6.6e-73 Score=630.74 Aligned_cols=405 Identities=32% Similarity=0.497 Sum_probs=356.0
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
++++||+|||+|+||++||..++++|++|++||++++.++++.+.+.+.+++++++|.++.++.+..+++++++++++.+
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~ 465 (725)
++||+||+||||+.++|+++++++.+.+++++||+||||+++++.+++.+.++++++|+|||+|++.++++|+++++.|+
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts 162 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATA 162 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCC
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHH
Q 004891 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVA 543 (725)
Q Consensus 466 ~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv-~~~dID~~~-~~~G~p~Gpf~~~D~~Gld~~ 543 (725)
+++++.+.++++.+|++++++++.|||++||++.++++|++.++++|. ++++||.++ .++|||||||+++|++|+|+.
T Consensus 163 ~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~ 242 (483)
T 3mog_A 163 AEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVN 242 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHH
Confidence 999999999999999999999999999999999999999999999986 899999999 689999999999999999999
Q ss_pred HHHHHHHHhhC-CCCCC-CcHHHHHHHHcCCCccccCceeeeccCCCCCCC-----CCCchhHHHHH-------------
Q 004891 544 AATSKEFDKAF-PDRSF-QSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-----DPSVLPIIEEC------------- 603 (725)
Q Consensus 544 ~~~~~~l~~~~-~~~~~-~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~~~~-----~~~~~~~~~~~------------- 603 (725)
+++++.+++.+ +++.+ |++++++|+++|++|+|||+|||+|+++..... ++....++...
T Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 322 (483)
T 3mog_A 243 FAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLL 322 (483)
T ss_dssp HHHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSCCCCCCCCCCCCGGGCCSCEEECSTTEEEETTEEE
T ss_pred HHHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCCCCCcccccCCCchhHHHHHHHHhcccccccchhh
Confidence 99999998876 44444 789999999999999999999999976321111 11110000000
Q ss_pred --------------hh----hccC--------------------------CCCCCCCccc--cHHHHHHHHHHHHHHHHH
Q 004891 604 --------------RR----LSNI--------------------------MPGGKVPISV--TEKEIVEMILFPVVNESC 637 (725)
Q Consensus 604 --------------~~----~~~~--------------------------~~~~~~~~~~--~~~~i~~r~~~~~~~ea~ 637 (725)
.. ..++ ...++....+ +..+|+||++++++|||+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~~nEA~ 402 (483)
T 3mog_A 323 IETQGETAQALAIRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEAL 402 (483)
T ss_dssp EECSSSCHHHHHHHHTSCEEEEECCSSSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHHHHHHH
T ss_pred cccCCcchHHHhhccccceeeeeccccceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHHHHHHH
Confidence 00 0000 0001111011 234699999999999999
Q ss_pred HHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHcCCCCCCC
Q 004891 638 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAP 714 (725)
Q Consensus 638 ~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l~~~~~~g~gf~~~ 714 (725)
+|+++||+ |++|||.+|++|+|||+ |||+|+|.+|+|.+++.++.|++.+|+ +|+|+++|++|++.|+.||.-
T Consensus 403 ~~l~eGva-s~~diD~a~~~G~G~P~---GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 403 DALQKGVA-SEQDIDTAMRLGVNYPY---GPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHTTSS-CHHHHHHHHHHHSCCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 99999998 99999999999999999 999999999999999999999999986 999999999999999999986
No 7
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=1.5e-53 Score=438.70 Aligned_cols=250 Identities=28% Similarity=0.373 Sum_probs=229.1
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccch
Q 004891 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (725)
Q Consensus 6 i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (725)
|.+|+ +|||++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...... ......
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~--~~~~~~ 78 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKPD--YEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCCC--HHHHTH
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccchh--hHHHHH
Confidence 56788 789999999999 68999999999999999999999999999999999999999999998653221 222334
Q ss_pred hHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHH
Q 004891 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (725)
Q Consensus 85 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l 164 (725)
..+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 157 (254)
T 3hrx_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhh
Confidence 455666 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhH
Q 004891 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (725)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (725)
||++++|+||+++||||+|||++++.+++.++++++++.++.++
T Consensus 158 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------------ 201 (254)
T 3hrx_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAY------------------------------------ 201 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH------------------------------------
T ss_pred cCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHH------------------------------------
Confidence 99999999999999999999999999999999999999887533
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|...+..++.|+|++|++++|++||+|+.+
T Consensus 202 ~~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 252 (254)
T 3hrx_A 202 ALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCC
Confidence 256788999999999999999999999999999999999999999998753
No 8
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=2.9e-53 Score=440.07 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=224.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc---c
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---V 79 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~---~ 79 (725)
++|.+++ ++||++||||||+ .|+||.+|+++|.+++++++.|++||+|||||.|++||+|+|++++........ .
T Consensus 15 e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 93 (274)
T 4fzw_C 15 EFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLG 93 (274)
T ss_dssp -CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHH
T ss_pred ccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHH
Confidence 5688999 8999999999995 799999999999999999999999999999999999999999998764322211 1
Q ss_pred cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
..+......++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 94 ~~~~~~~~~l~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 94 MSVERFYNPLV-RRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHTHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHH-HHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 12223344555 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 221 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGL------------------------------- 221 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHH-------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887533
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+.+
T Consensus 222 -----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f~ 272 (274)
T 4fzw_C 222 -----GLIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFT 272 (274)
T ss_dssp -----HHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCCC
T ss_pred -----HHHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 356888999999999999999999999999999999999999999998853
No 9
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=4.9e-53 Score=434.76 Aligned_cols=250 Identities=30% Similarity=0.453 Sum_probs=228.6
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 004891 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (725)
Q Consensus 5 ~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (725)
.|.+++ +++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++....... .+.
T Consensus 6 ~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~---~~~ 81 (258)
T 4fzw_A 6 ELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAA---TLN 81 (258)
T ss_dssp EEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHH---HHT
T ss_pred cEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhh---HHH
Confidence 588998 7999999999995 79999999999999999999999999999999999999999999986532111 112
Q ss_pred hhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHH
Q 004891 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (725)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (725)
.....++ ..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++|+
T Consensus 82 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ll 160 (258)
T 4fzw_A 82 DTRPQLW-ARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMV 160 (258)
T ss_dssp CSHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred hHHHHHH-HHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHH
Confidence 2334556 669999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 004891 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (725)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (725)
+||++++|+||+++||||+|||++++.+++.++++++++.+|.+++
T Consensus 161 ltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------------- 206 (258)
T 4fzw_A 161 LSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQ---------------------------------- 206 (258)
T ss_dssp HHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999875433
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|..+
T Consensus 207 --~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 256 (258)
T 4fzw_A 207 --AAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFK 256 (258)
T ss_dssp --HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 56888999999999999999999999999999999999999999998753
No 10
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=2.2e-52 Score=438.28 Aligned_cols=268 Identities=22% Similarity=0.339 Sum_probs=238.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHH-HHHHhhcCcccccCc-cc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 384 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~~ 384 (725)
.++||+|||+|+||++||..++++|++|++||++++.++++.+++++.++++.++|.++.. ..+..+++++.++++ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4689999999999999999999999999999999999999999999999999999988643 456677899999998 57
Q ss_pred ccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCC
Q 004891 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (725)
Q Consensus 385 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t 464 (725)
+++||+|||||||++++|+++|++|++++++++||+||||+++++++++.+.+|+||+|+|||||++.+|+|||++|+.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCcchhhhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHhh
Q 004891 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 538 (725)
Q Consensus 465 ~~e~~~~~~~l~~~lGk~~v~v-~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv-~~~dID~~~-~~~G~p---~Gpf~~~D~~ 538 (725)
++++++++..+++.+|++||++ +|+||||+||++.++++||++++++|+ +++|||.++ .++|+| ||||+++|++
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999866 899999999999999999999999997 999999999 888887 8999999999
Q ss_pred chHHHHHHHHHHHhhCCCCCCCcHHHHH-HHHcCCCccccCceeeecc
Q 004891 539 GYGVAAATSKEFDKAFPDRSFQSPLVDL-LLKSGRNGKANGKGLYTYE 585 (725)
Q Consensus 539 Gld~~~~~~~~l~~~~~~~~~~~~~l~~-~v~~g~~G~k~g~Gfy~y~ 585 (725)
|+|+...+.+ +.+ .++. +-+.|+.+.++|+++|+|.
T Consensus 245 G~~~~~~~~~-~~~----------~~~~~~~~~~~~p~~~~~~~~k~~ 281 (319)
T 3ado_A 245 AEGMLSYCDR-YSE----------GMKRVLKSFGSIPEFSGATVEKVN 281 (319)
T ss_dssp TTSHHHHHHH-HHH----------HHHHHHHTCCCCCCCCHHHHHHHH
T ss_pred CccHHHHHHH-hhH----------hHHHHHHHcCcccccchHHHHHHH
Confidence 9987654322 211 1222 2333566666666666553
No 11
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=2.5e-52 Score=434.72 Aligned_cols=257 Identities=32% Similarity=0.426 Sum_probs=238.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
-+||+|||+|+||++||.+++ +|++|++||++++.++++.+. + .+..+++++.+++++.+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~-------l----------~~~~~~~i~~~~~~~~~~~ 73 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQ-------I----------PEELLSKIEFTTTLEKVKD 73 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH-------S----------CGGGGGGEEEESSCTTGGG
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHH-------H----------HHHHhCCeEEeCCHHHHcC
Confidence 479999999999999999999 999999999999998887643 0 1334567877888877999
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCHH
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e 467 (725)
||+||||+||+.++|+.+|+++... +++|++||||+++++++++.+.++.+++|+|||+|++.++++|+++++.|+++
T Consensus 74 aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~~ 151 (293)
T 1zej_A 74 CDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDSK 151 (293)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCHH
T ss_pred CCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCHH
Confidence 9999999999999999999999876 99999999999999999998888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-HhcCCCc---cHHHHHHhhchHHH
Q 004891 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVA 543 (725)
Q Consensus 468 ~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv~~~dID~~~-~~~G~p~---Gpf~~~D~~Gld~~ 543 (725)
++++++++++.+|++|+++++. |++||++.++++||+.++++|+++++||.++ .++|+|+ |||+++|.+|+|++
T Consensus 152 ~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~ 229 (293)
T 1zej_A 152 TVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVA 229 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHH
Confidence 9999999999999999999986 9999999999999999999999999999999 7999999 99999999999999
Q ss_pred HHHHHHHHhhCCCCC-CCcHHHHHHHHcCCCccccCceeeeccC
Q 004891 544 AATSKEFDKAFPDRS-FQSPLVDLLLKSGRNGKANGKGLYTYEK 586 (725)
Q Consensus 544 ~~~~~~l~~~~~~~~-~~~~~l~~~v~~g~~G~k~g~Gfy~y~~ 586 (725)
+++++.+++.+++.. .|++++++|+++|++|+|||+|||+|++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 230 YYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCc
Confidence 999999999988744 4889999999999999999999999954
No 12
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=7.3e-52 Score=428.06 Aligned_cols=256 Identities=27% Similarity=0.462 Sum_probs=231.8
Q ss_pred CCCCcEEEE-EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCC
Q 004891 1 MAAPRVTME-VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (725)
Q Consensus 1 M~~~~i~~~-~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (725)
|++++|.++ . +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++.... ..
T Consensus 5 m~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~ 82 (265)
T 3kqf_A 5 LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMN-EE 82 (265)
T ss_dssp --CCSEEEECC-STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCC-HH
T ss_pred ccCCeEEEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccC-HH
Confidence 678899999 7 8999999999995 7999999999999999999999999999999999 8999999999987532 11
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
....+....+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 161 (265)
T 3kqf_A 83 QVRHAVSMIRTTM-EMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 161 (265)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHH
Confidence 1222333445566 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.+|.++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~----------------------------- 212 (265)
T 3kqf_A 162 RAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAV----------------------------- 212 (265)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887533
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 213 -------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3kqf_A 213 -------RLAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYK 263 (265)
T ss_dssp -------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 367889999999999999999999999999999999999999999988753
No 13
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=7.6e-52 Score=426.98 Aligned_cols=255 Identities=37% Similarity=0.616 Sum_probs=230.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 004891 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (725)
+++|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATEL 83 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHH
T ss_pred ccceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHH
Confidence 36799999 89999999999966999999999999999999999999999999999999999999998654221112222
Q ss_pred chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHH
Q 004891 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (725)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (725)
....+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 84 AQLGQVTF-ERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 23334455 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (725)
++||++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~---------------------------------- 208 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATA---------------------------------- 208 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH----------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999887533
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 209 --~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f~ 259 (261)
T 3pea_A 209 --RAVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPSFS 259 (261)
T ss_dssp --HHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356888888888889999999999999999999999999999999998753
No 14
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=1.2e-51 Score=426.50 Aligned_cols=257 Identities=21% Similarity=0.308 Sum_probs=229.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc-
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (725)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........
T Consensus 1 M~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (268)
T 3i47_A 1 MSLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEE 79 (268)
T ss_dssp -CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHH
T ss_pred CCCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHH
Confidence 8999999999 8999999999995 799999999999999999999999999999999999999999999875322111
Q ss_pred -ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
..........++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~ 157 (268)
T 3i47_A 80 ENLEDSLVLGNLM-YSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGER 157 (268)
T ss_dssp HHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHH
Confidence 111122344556 67999999999999999999999999999999999999999999999999999887 899999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.++
T Consensus 158 ~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------- 208 (268)
T 3i47_A 158 AAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAV----------------------------- 208 (268)
T ss_dssp HHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887543
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHH-HHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~-~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
..+|++++.....++++ .++.|.+.+..++.|+|++|++++|++||+|....
T Consensus 209 -------~~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 261 (268)
T 3i47_A 209 -------KNSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWNE 261 (268)
T ss_dssp -------HHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC-
T ss_pred -------HHHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 35678888888888888 78999999999999999999999999999998654
No 15
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=9.1e-52 Score=433.37 Aligned_cols=275 Identities=28% Similarity=0.409 Sum_probs=255.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcC-CCCHHHHHHhhcCcccccCc-cc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g-~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
.++||+|||+|.||++||..++++|++|++||++++.++++.+.+.+.+.+.++++ .++.++.+....++..++++ +.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 57899999999999999999999999999999999999999999999999888888 77777777777888888888 46
Q ss_pred ccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCC
Q 004891 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (725)
Q Consensus 385 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t 464 (725)
+++||+||+|+|++.++++.+++++.+.+++++|++||||+++++++++.+.++.+++|+|||+|++.++++|+++++.|
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t 162 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKT 162 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTS
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCcchhhhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchH
Q 004891 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYG 541 (725)
Q Consensus 465 ~~e~~~~~~~l~~~lGk~~v~v-~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv-~~~dID~~~-~~~G~p~Gpf~~~D~~Gld 541 (725)
++++++.++++++.+|+.++++ ++.|||++||++.++++|++.++++|. +|++||.++ .++|+|+|||+++|++|||
T Consensus 163 ~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld 242 (283)
T 4e12_A 163 DPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLT 242 (283)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHH
Confidence 9999999999999999999999 799999999999999999999999985 999999999 7999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCC-CcHHHHHHHHcCCCccccCceeeec
Q 004891 542 VAAATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKANGKGLYTY 584 (725)
Q Consensus 542 ~~~~~~~~l~~~~~~~~~-~~~~l~~~v~~g~~G~k~g~Gfy~y 584 (725)
+.++++++ ..++..+ |++++++|+++|++|+|||+|||+|
T Consensus 243 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 243 TAYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 99999883 2222223 7789999999999999999999998
No 16
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=6.4e-52 Score=429.41 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=229.5
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (725)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++++ |+++|+|||||.|++||+|+|++++..... ...
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~ 88 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDA-TEG 88 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCH-HHH
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccCh-hhH
Confidence 6678899999 7999999999995 8999999999999999998 579999999999999999999999865211 111
Q ss_pred cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
.........++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 89 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 167 (275)
T 3hin_A 89 LVHSQTWHRVF-DKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167 (275)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHH
Confidence 12223345566 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|+++|++++|+||+++||||+|||++++.+++.++|+++++.+|.++
T Consensus 168 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~------------------------------- 216 (275)
T 3hin_A 168 ADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTN------------------------------- 216 (275)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHH-------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887533
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
..+|++++.....+++++++.|...+..++.|+|++|++++|++||+|....
T Consensus 217 -----~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 268 (275)
T 3hin_A 217 -----FAVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVRE 268 (275)
T ss_dssp -----HHHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC--
T ss_pred -----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 3567888888889999999999999999999999999999999999998654
No 17
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.6e-51 Score=424.80 Aligned_cols=254 Identities=32% Similarity=0.446 Sum_probs=231.0
Q ss_pred CCCCcEEEEEecCc-EEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 004891 1 MAAPRVTMEVGNDG-VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (725)
Q Consensus 1 M~~~~i~~~~~~~~-v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (725)
|+++.|.++. +++ |++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 83 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQ- 83 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchh-
Confidence 7788999999 565 9999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
........++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 84 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 160 (263)
T 3moy_A 84 --ARERNLLSGW-DSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAK 160 (263)
T ss_dssp --HHHTTTTHHH-HHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHH
Confidence 1122233455 6699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (725)
|++|++||++++|+||+++||||+|||++++.+++.++|++++..++.++
T Consensus 161 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 210 (263)
T 3moy_A 161 AMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAG------------------------------ 210 (263)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHH------------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887533
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 211 ------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 261 (263)
T 3moy_A 211 ------RAVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFT 261 (263)
T ss_dssp ------HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCC
Confidence 367889999999999999999999999999999999999999999988753
No 18
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=2.2e-51 Score=426.09 Aligned_cols=254 Identities=30% Similarity=0.487 Sum_probs=229.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (725)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 98 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD-- 98 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh--
Confidence 7788899999 7899999999995 79999999999999999999999999999999999999999999987532111
Q ss_pred cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
......... + ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 99 ~~~~~~~~~-~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 176 (278)
T 3h81_A 99 AFTADFFAT-W-GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKA 176 (278)
T ss_dssp HHHHTTTGG-G-HHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHH-H-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHH
Confidence 001111112 4 56899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.++.++
T Consensus 177 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~------------------------------- 225 (278)
T 3h81_A 177 MDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAA------------------------------- 225 (278)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH-------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887533
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 226 -----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 276 (278)
T 3h81_A 226 -----RMAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT 276 (278)
T ss_dssp -----HHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 367889999999999999999999999999999999999999999988753
No 19
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=1.7e-50 Score=428.23 Aligned_cols=283 Identities=33% Similarity=0.526 Sum_probs=261.0
Q ss_pred CCCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHH-----HHHHhhcCcc
Q 004891 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLK 377 (725)
Q Consensus 303 ~~~~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~-----~~~~~~~~i~ 377 (725)
.|..+|+||+|||+|.||.+||..|+++|++|++||+++++++++.+.+.+.++.++++|.++.. +......+++
T Consensus 10 ~~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 10 AKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 35567889999999999999999999999999999999999999988888888888888887654 4444556788
Q ss_pred cccCcc-cccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCee
Q 004891 378 GVLDYS-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 456 (725)
Q Consensus 378 ~~~~~~-~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lv 456 (725)
.+++++ .+++||+||+|||++.++++.+++++.+.+++++||+|++|+++++++++.+.++++++++||++|+..++++
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~ 169 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLV 169 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEE
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceE
Confidence 788885 7899999999999999999999999999999999999999999999999888888999999999999999999
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcC-CCHHHHHHHH-HhcCCCccHHHH
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG-VDVFRIDSAI-RSFGLPIGPFQL 534 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~G-v~~~dID~~~-~~~G~p~Gpf~~ 534 (725)
|+++++.+++++++.+.++++.+|+.++++++.+||++||++.++++|+++++++| +++++||.++ .++|||+|||++
T Consensus 170 ~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~ 249 (302)
T 1f0y_A 170 EVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFEL 249 (302)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999997 5999999999 899999999999
Q ss_pred HHhhchHHHHHHHHHHHhhC-CCC-CCCcHHHHHHHHcCCCccccCceeeecc
Q 004891 535 LDLAGYGVAAATSKEFDKAF-PDR-SFQSPLVDLLLKSGRNGKANGKGLYTYE 585 (725)
Q Consensus 535 ~D~~Gld~~~~~~~~l~~~~-~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y~ 585 (725)
+|.+|+|+++++++.+++.+ +++ +.|++++++|+++|++|+|||+|||+|+
T Consensus 250 ~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 250 LDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 99999999999999999988 775 4488999999999999999999999994
No 20
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=1.1e-50 Score=416.88 Aligned_cols=250 Identities=29% Similarity=0.380 Sum_probs=227.9
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccch
Q 004891 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (725)
Q Consensus 6 i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (725)
|.++. +++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++.... .....+..
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 78 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRK--PDYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSC--CCHHHHTH
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhcc--hhHHHHHH
Confidence 67788 7899999999995 79999999999999999999999999999999999999999999987531 11222223
Q ss_pred hHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHH
Q 004891 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (725)
Q Consensus 85 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l 164 (725)
..+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 157 (254)
T 3gow_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 355666 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChhH
Q 004891 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (725)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (725)
||++++|+||+++||||+|||++++.+++.++|+++++.||.++
T Consensus 158 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------------ 201 (254)
T 3gow_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAY------------------------------------ 201 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH------------------------------------
T ss_pred cCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHHH------------------------------------
Confidence 99999999999999999999999999999999999999887543
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 202 ~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 252 (254)
T 3gow_A 202 ALTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred HHHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 356788999999999999999999999999999999999999999988753
No 21
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=9.3e-51 Score=419.72 Aligned_cols=253 Identities=22% Similarity=0.345 Sum_probs=218.9
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhh---hccC
Q 004891 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ---KVHG 75 (725)
Q Consensus 1 M~-~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~---~~~~ 75 (725)
|| ++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++. ....
T Consensus 1 Ms~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T 3fdu_A 1 MSLHPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79 (266)
T ss_dssp -CCCTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence 65 67899999 8999999999995 89999999999999999999999999999999999999999999987 3322
Q ss_pred CCcccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhC
Q 004891 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (725)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG 155 (725)
.. .........++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~--~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 156 (266)
T 3fdu_A 80 AG--PAGQVPPFVLL-KSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAG 156 (266)
T ss_dssp CS--CGGGSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHC
T ss_pred hh--hHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhC
Confidence 11 12233455666 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (725)
..+|++|+++|++++|+||+++||||+||| ++.+++.++|+++++.|+.+++
T Consensus 157 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~-------------------------- 208 (266)
T 3fdu_A 157 YHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLK-------------------------- 208 (266)
T ss_dssp HHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999998 8999999999999998875433
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|++++... .+++++++.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 209 ----------~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~~ 258 (266)
T 3fdu_A 209 ----------QTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFSQ 258 (266)
T ss_dssp ----------HHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC---------
T ss_pred ----------HHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 4566666654 4688999999999999999999999999999999998765
No 22
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=4e-51 Score=422.08 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=224.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCC-cCCCCchhhhh--c-cC
Q 004891 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF-SGGFDINVFQK--V-HG 75 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F-~aG~Dl~~~~~--~-~~ 75 (725)
||+++|.++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|++| |+|+|++++.. . ..
T Consensus 1 Ms~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 1 MSLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp --CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSS
T ss_pred CCCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCC
Confidence 8999999999 899999999999 68999999999999999999999999999999999999 99999999875 2 11
Q ss_pred CCcccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhC
Q 004891 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (725)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG 155 (725)
......+.....+++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG 158 (263)
T 3lke_A 80 DVRLREVLHVLNHCV-LEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158 (263)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhC
Confidence 111222333445566 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecC-cchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~-~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (725)
..+|++|+++|++++|+||+++||||+||| ++++.+++.++|+++++.|+.+++
T Consensus 159 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (263)
T 3lke_A 159 YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIA------------------------- 213 (263)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 999999999999999999999999999999 999999999999999999875433
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
.+|++++.....+++++++.|.+.+..++.|+|+++++++|++++++.+
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~~ 262 (263)
T 3lke_A 214 -----------ATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHHH 262 (263)
T ss_dssp -----------HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC--------
T ss_pred -----------HHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCCC
Confidence 5678888888888999999999999999999999999999999998764
No 23
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=4.4e-51 Score=422.52 Aligned_cols=256 Identities=24% Similarity=0.336 Sum_probs=227.7
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 004891 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (725)
Q Consensus 1 M~-~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (725)
|+ ++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++.......
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 82 (265)
T 3swx_A 5 MSDYETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGG- 82 (265)
T ss_dssp --CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC---
T ss_pred CCCCceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccch-
Confidence 55 67899999 7999999999995 79999999999999999999999999999999999999999999987543221
Q ss_pred ccccchhHHHHHHHHH-hhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 79 VSLMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l-~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
...+.....+.+ +.+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 161 (265)
T 3swx_A 83 ASLTPEGGINPW-QVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWG 161 (265)
T ss_dssp CCCCCTTCCCTT-CCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHH-HHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHH
Confidence 111112222334 457 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.||.++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~----------------------------- 212 (265)
T 3swx_A 162 NAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGV----------------------------- 212 (265)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHH-----------------------------
T ss_pred HHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887533
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 213 -------~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3swx_A 213 -------QATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAEFV 263 (265)
T ss_dssp -------HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred -------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 356788888888899999999999999999999999999999999988753
No 24
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.3e-50 Score=422.42 Aligned_cols=256 Identities=21% Similarity=0.307 Sum_probs=229.0
Q ss_pred CCCCcEEEEEec--CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC
Q 004891 1 MAAPRVTMEVGN--DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77 (725)
Q Consensus 1 M~~~~i~~~~~~--~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~ 77 (725)
|+++ |.++. + ++|++||||||+ .|+||.+|+.+|.+++++++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~ 99 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSRE 99 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHH
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHH
Confidence 6665 88888 6 899999999995 69999999999999999999999999999999999999999999987521111
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
....+.....+++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|..
T Consensus 100 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~ 177 (286)
T 3myb_A 100 YYEKLFARCTDVM-LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRK 177 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHH
Confidence 1222333445566 67999999999999999999999999999999999999999999999999 788899999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 178 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~----------------------------- 228 (286)
T 3myb_A 178 AAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAV----------------------------- 228 (286)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHH-----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887533
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|....
T Consensus 229 -------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~g 280 (286)
T 3myb_A 229 -------AMGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWHT 280 (286)
T ss_dssp -------HHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCCC
T ss_pred -------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCCC
Confidence 3567888888889999999999999999999999999999999999988654
No 25
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=1.8e-50 Score=415.26 Aligned_cols=246 Identities=23% Similarity=0.323 Sum_probs=225.1
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (725)
+.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++... .+
T Consensus 6 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-------~~ 77 (255)
T 3p5m_A 6 NGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-------GA 77 (255)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-------HH
T ss_pred ceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-------HH
Confidence 4689998 7899999999995 7999999999999999999999999999999999999999999988621 23
Q ss_pred chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHH
Q 004891 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (725)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (725)
....+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|
T Consensus 78 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l 156 (255)
T 3p5m_A 78 ADAANRVV-RAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRM 156 (255)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 33445666 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (725)
+++|++++|+||+++||||+|+|++++.+++.++|++++..|+.++
T Consensus 157 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~---------------------------------- 202 (255)
T 3p5m_A 157 AMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAF---------------------------------- 202 (255)
T ss_dssp HHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHH----------------------------------
T ss_pred HHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999887533
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|..
T Consensus 203 --~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 252 (255)
T 3p5m_A 203 --GWTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNF 252 (255)
T ss_dssp --HHHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred --HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 35678888888899999999999999999999999999999999998875
No 26
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=2.8e-50 Score=419.70 Aligned_cols=256 Identities=25% Similarity=0.358 Sum_probs=231.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc--
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV-- 79 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~-- 79 (725)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++.........
T Consensus 16 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 94 (279)
T 3g64_A 16 WRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR 94 (279)
T ss_dssp CSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhH
Confidence 46799999 7899999999995 7999999999999999999999999999999999999999999998754332211
Q ss_pred -cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCC-CCchhhchHhhhhCHH
Q 004891 80 -SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI-PGFGGTQRLPRLVGLS 157 (725)
Q Consensus 80 -~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~-p~~g~~~~l~r~vG~~ 157 (725)
..+....+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|++++|..
T Consensus 95 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 95 LLDFNRMTGQVV-RAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 12223344556 67999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.++|++|++.|+.++
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------- 224 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAH----------------------------- 224 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887533
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
..+|++++.....+++++++.|...+..++.|+|++|++++|++||+|+...
T Consensus 225 -------~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~g 276 (279)
T 3g64_A 225 -------AQTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKWQG 276 (279)
T ss_dssp -------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCCC
T ss_pred -------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 3567889998899999999999999999999999999999999999887543
No 27
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=2.8e-50 Score=421.03 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=223.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc----
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---- 78 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~---- 78 (725)
..+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 4577888 7999999999995 899999999999999999999999999999999999999999999865432211
Q ss_pred --ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCC-chhhchHhhhhC
Q 004891 79 --VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-FGGTQRLPRLVG 155 (725)
Q Consensus 79 --~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~-~g~~~~l~r~vG 155 (725)
...+......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|++++|
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG 181 (290)
T 3sll_A 103 TIALRSMELLDEVI-LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG 181 (290)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence 112233344556 6799999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (725)
..+|++|+++|++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 235 (290)
T 3sll_A 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIE-------------------------- 235 (290)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999875433
Q ss_pred HhCCCChhHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHh-CCHhHHHHHHHHHhhhhhcCC
Q 004891 236 KTAPNMPQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~E~~~~~~~~-~s~~~~~~i~aF~~~r~~~~~ 295 (725)
.+|++++.... .+++++++.|...+..++ .|+|++|++++|++||+|...
T Consensus 236 ----------~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f~ 287 (290)
T 3sll_A 236 ----------LTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEFR 287 (290)
T ss_dssp ----------HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCCC
T ss_pred ----------HHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 56788888888 899999999999999999 999999999999999988754
No 28
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=6.8e-51 Score=419.21 Aligned_cols=251 Identities=24% Similarity=0.298 Sum_probs=190.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (725)
+..|.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++...........
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 5 MVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred cceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 35688998 7899999999995 699999999999999999999999999999999999999999999875432222233
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
.....+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (256)
T 3qmj_A 84 GKFGFRGLI-KALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAW 162 (256)
T ss_dssp CSSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 344556677 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------------- 209 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSL--------------------------------- 209 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH---------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999887533
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhh
Q 004891 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 291 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 210 ---~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 210 ---MAVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp ---HHHHHHHHCC-------------------------------------
T ss_pred ---HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 35678888888889999999999999999999999999999999985
No 29
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=1.9e-50 Score=419.02 Aligned_cols=257 Identities=24% Similarity=0.322 Sum_probs=229.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC---C
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG---A 76 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~---~ 76 (725)
|+ +.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 1 m~-~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 78 (269)
T 1nzy_A 1 MY-EAIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGV 78 (269)
T ss_dssp CC-SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccCh
Confidence 66 5688998 7899999999995 899999999999999999999999999999999999999999998754210 1
Q ss_pred Ccc-cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhC
Q 004891 77 GDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (725)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG 155 (725)
.+. ..+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 79 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 157 (269)
T 1nzy_A 79 RDHFRIAALWWHQMI-HKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157 (269)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhh
Confidence 100 11222344556 6699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (725)
..+|++|++||++++|+||+++||||+|||++++.+++.++++++++.+|.++
T Consensus 158 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~--------------------------- 210 (269)
T 1nzy_A 158 MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQ--------------------------- 210 (269)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHH---------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999887433
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
..+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|+..+
T Consensus 211 ---------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 262 (269)
T 1nzy_A 211 ---------VMAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQ 262 (269)
T ss_dssp ---------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTCCS
T ss_pred ---------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCC
Confidence 2567788888888999999999999999999999999999999999988654
No 30
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=6.1e-50 Score=414.21 Aligned_cols=252 Identities=25% Similarity=0.388 Sum_probs=228.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCCCcCCCCchhhhhccCCCcccc
Q 004891 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (725)
++.+.++. +++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| .|++||+|+|++++.. .. .....
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~~-~~~~~ 84 (265)
T 2ppy_A 8 KQYLTVFK-EDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-AD-PRFKT 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-SC-HHHHH
T ss_pred CCeEEEEe-eCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-cc-hhHHH
Confidence 45788888 789999999999779999999999999999999999999999999 9999999999999864 11 11112
Q ss_pred cchhH-HHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCc-eEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 82 MPDVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT-QLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 82 ~~~~~-~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a-~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
+.... .+++ ..|.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|++++|..+|
T Consensus 85 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 163 (265)
T 2ppy_A 85 QFCLFCNETL-DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRA 163 (265)
T ss_dssp HHHHHHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence 22233 4566 67999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|+++|++++|+||+++||||+|||++++.+++.+++++++..++.++
T Consensus 164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 212 (265)
T 2ppy_A 164 LDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAV------------------------------- 212 (265)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH-------------------------------
T ss_pred HHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999886433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|..
T Consensus 213 -----~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 262 (265)
T 2ppy_A 213 -----SNIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPNW 262 (265)
T ss_dssp -----HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred -----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 35678888888889999999999999999999999999999999988774
No 31
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=4.9e-50 Score=414.70 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=220.9
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 004891 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (725)
Q Consensus 1 M~-~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (725)
|+ +++|.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++ ... . ..
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~--~-~~ 79 (265)
T 3rsi_A 5 MSAARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW--M-VR 79 (265)
T ss_dssp ----CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc--c-cc
Confidence 54 57899999 7899999999995 79999999999999999999999999999999999999999998 221 1 11
Q ss_pred ccccchhHHH-HHHHHH-h--hCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhh
Q 004891 79 VSLMPDVSVE-LVVNLI-E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (725)
Q Consensus 79 ~~~~~~~~~~-~~~~~l-~--~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~v 154 (725)
...+...... ++ +.| . ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 158 (265)
T 3rsi_A 80 DGSAPPLDPATIG-KGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQI 158 (265)
T ss_dssp -----CCCHHHHH-HHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHS
T ss_pred hHHHHHHhHHHHH-HHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 1122222334 55 668 8 99999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 004891 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (725)
Q Consensus 155 G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (725)
|..+|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 159 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~-------------------------- 212 (265)
T 3rsi_A 159 PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAV-------------------------- 212 (265)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHH--------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999987533
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 213 ----------~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3rsi_A 213 ----------RNAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREARFT 263 (265)
T ss_dssp ----------HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCCCC
T ss_pred ----------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 356888999888999999999999999999999999999999999988753
No 32
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=4.3e-50 Score=413.49 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=222.1
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 004891 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (725)
+.+.++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... .+
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---~~ 78 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHG---DV 78 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHH---HH
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchh---HH
Confidence 5788998 789999999999 589999999999999999999999999999999999999999999886422111 11
Q ss_pred ch-hHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 83 PD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 83 ~~-~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
.. ...+++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 79 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T 2ej5_A 79 LRSRYAPMM-KALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE 157 (257)
T ss_dssp HHHTHHHHH-HHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 11 234556 6699999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|++||++++|+||+++||||+|||++++.+++.+++++++..|+.++
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------------- 204 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAI--------------------------------- 204 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHH---------------------------------
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999886433
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|.+
T Consensus 205 ---~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 254 (257)
T 2ej5_A 205 ---GLIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLF 254 (257)
T ss_dssp ---HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCCC
T ss_pred ---HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCCC
Confidence 25678888888889999999999999999999999999999999988764
No 33
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=1e-50 Score=419.56 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=227.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (725)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++..........
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~- 83 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNP- 83 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSS-
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHH-
Confidence 36788998 7899999999995 79999999999999999999999999999999999999999999987643222111
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
.... +.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~-~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 161 (265)
T 3qxz_A 84 DFSA-SPVQ-PAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAE 161 (265)
T ss_dssp CCCS-CCSS-SCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHH
T ss_pred HHHH-HHHH-HHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 1112 3445 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc-CchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (725)
|+++|++++|+||+++||||+|||++++.+++.++|++++.. ||.++
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~-------------------------------- 209 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESA-------------------------------- 209 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHH--------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998 87533
Q ss_pred ChhHHHHHHHHHHhhcCCHHHH--HHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 241 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~--l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++ ++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 210 ----~~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f~ 262 (265)
T 3qxz_A 210 ----ALTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRWA 262 (265)
T ss_dssp ----HHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCCC
T ss_pred ----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCCC
Confidence 256778888888888888 999999999999999999999999999998754
No 34
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=6.1e-50 Score=412.56 Aligned_cols=253 Identities=30% Similarity=0.462 Sum_probs=225.9
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 004891 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (725)
Q Consensus 1 M~-~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (725)
|+ +..+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++......
T Consensus 1 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-- 77 (258)
T 2pbp_A 1 MSEFVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPI-- 77 (258)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHH--
T ss_pred CCCcceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccch--
Confidence 55 46788888 7899999999995 7999999999999999999999999999999999999999999988642210
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
...+.... +++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 78 ~~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 155 (258)
T 2pbp_A 78 RLEWLNQF-ADW-DRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKR 155 (258)
T ss_dssp HHHHHCTT-HHH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHH-HHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHH
Confidence 01111112 455 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (725)
|++|+++|++++|+||+++||||+|+|++++.+++.++|++++..+|.++
T Consensus 156 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 205 (258)
T 2pbp_A 156 ALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLAL------------------------------ 205 (258)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH------------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999886433
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|..
T Consensus 206 ------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 255 (258)
T 2pbp_A 206 ------RLIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPRF 255 (258)
T ss_dssp ------HHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred ------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 35678888888889999999999999999999999999999999988764
No 35
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=3.1e-50 Score=419.41 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=221.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccC----CC
Q 004891 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHG----AG 77 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~----~~ 77 (725)
++.|.++. +++|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~i~~~~-~~~va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSS-EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 77899999 79999999999999999999999999999999999999999999998 79999999998864210 00
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeC-CceEeCcccccCCCCCchhhchHhhhhCH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~-~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (725)
...........++ ..|.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|+|++|.
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 165 (287)
T 3gkb_A 87 SAPADVNVFQAVG-ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR 165 (287)
T ss_dssp TSCTTCCTTHHHH-HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence 1112223345666 679999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHH
Q 004891 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (725)
Q Consensus 157 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (725)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~--------------------------- 218 (287)
T 3gkb_A 166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIE--------------------------- 218 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999875433
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhh
Q 004891 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (725)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 291 (725)
.+|++++.. ...++++.|.+.+..++.|+|++|++++|++||+
T Consensus 219 ---------~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~ 261 (287)
T 3gkb_A 219 ---------AAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGA 261 (287)
T ss_dssp ---------HHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTT
T ss_pred ---------HHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 455666553 3468999999999999999999999999999987
No 36
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=9e-50 Score=427.16 Aligned_cols=291 Identities=20% Similarity=0.283 Sum_probs=230.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCC--c
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG--D 78 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~--~ 78 (725)
++.|.+++ +++|++||||||+ +|+||.+|+.+|.+++++++.|++||+|||||.| ++||+|+|++++....... .
T Consensus 8 ~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 8 NEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 57899999 8999999999995 7999999999999999999999999999999998 6999999999986532211 1
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
...+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 87 ~~~~~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~ 164 (353)
T 4hdt_A 87 ARRFWFDEYRLN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KL 164 (353)
T ss_dssp HHHHHHHHHHHH-HHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-TH
T ss_pred HHHHHHHHHHHH-HHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HH
Confidence 222333344555 6699999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhh---------h----hhccCCCCChHHHHH
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR---------S----LHRTDKLGSLSEARE 225 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~---------~----~~~~~~~~~~~~~~~ 225 (725)
+++|++||++++|+||+++||||+|||++++.+.+.+++.+.......... . ..+.-...++....+
T Consensus 165 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~ 244 (353)
T 4hdt_A 165 GLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIA 244 (353)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHH
Confidence 999999999999999999999999999999999999988764322110000 0 000000011111111
Q ss_pred HHH-----HHHHHHHHhCCCCh-hHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHhCCHhHHHHHHHHH--hhhhhcCCC
Q 004891 226 VLK-----LARLQAKKTAPNMP-QHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATSKVP 296 (725)
Q Consensus 226 ~~~-----~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~-~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~--~~r~~~~~~ 296 (725)
.+. .+....++...+.| +...+|+.++++... +++++++.|.+.+..++.|+|++||+++|+ +||+|+++|
T Consensus 245 ~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~p 324 (353)
T 4hdt_A 245 ALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWRP 324 (353)
T ss_dssp HHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCSS
T ss_pred HHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCCC
Confidence 111 12222333344444 678899999998875 799999999999999999999999999999 999999876
No 37
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=5.8e-50 Score=411.44 Aligned_cols=249 Identities=28% Similarity=0.440 Sum_probs=225.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (725)
|+ +.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 5 m~-~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 82 (256)
T 3trr_A 5 MA-DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE 82 (256)
T ss_dssp CC-CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred CC-CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence 55 5689998 7999999999995 7999999999999999999999999999999999999999999998753221111
Q ss_pred cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
..+ . + ..+ ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 83 ~~~-----~-~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 154 (256)
T 3trr_A 83 RGL-----G-F-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVA 154 (256)
T ss_dssp TEE-----T-T-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHH
T ss_pred hhh-----h-H-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHH
Confidence 111 1 2 225 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 155 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 203 (256)
T 3trr_A 155 MELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAV------------------------------- 203 (256)
T ss_dssp HHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHH-------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887533
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 204 -----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 254 (256)
T 3trr_A 204 -----AATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVWQ 254 (256)
T ss_dssp -----HHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 356888999999999999999999999999999999999999999988754
No 38
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=3.2e-50 Score=418.40 Aligned_cols=253 Identities=21% Similarity=0.287 Sum_probs=220.9
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC-----C-
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-----A- 76 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~-----~- 76 (725)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 4789999 7899999999995 899999999999999999999999999999999999999999999865332 0
Q ss_pred CcccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCH
Q 004891 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (725)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (725)
..........+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|.
T Consensus 90 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~ 167 (274)
T 3tlf_A 90 LSTYDQWEAPQEGT-PPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPR 167 (274)
T ss_dssp TCSGGGGSCCCTTC-CCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCH
T ss_pred hhHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCH
Confidence 11111111223344 568899999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHcCC--CCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 004891 157 SKAIEMMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (725)
Q Consensus 157 ~~a~~l~l~g~--~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (725)
.+|++|++||+ +++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 168 ~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~-------------------------- 221 (274)
T 3tlf_A 168 SIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAV-------------------------- 221 (274)
T ss_dssp HHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH--------------------------
T ss_pred HHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHH--------------------------
Confidence 99999999999 99999999999999999999999999999999999987533
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 222 ----------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 272 (274)
T 3tlf_A 222 ----------RGTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPNWQ 272 (274)
T ss_dssp ----------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 356888999989999999999999999999999999999999999988753
No 39
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=8.3e-51 Score=425.98 Aligned_cols=256 Identities=25% Similarity=0.334 Sum_probs=183.4
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhh---ccCCC
Q 004891 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK---VHGAG 77 (725)
Q Consensus 3 ~~~i~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~---~~~~~ 77 (725)
++.|.++. ++ +|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.. .....
T Consensus 28 ~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 28 QDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 47799999 67 99999999995 799999999999999999999999999999999999999999999864 11110
Q ss_pred ----cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhh
Q 004891 78 ----DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL 153 (725)
Q Consensus 78 ----~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~ 153 (725)
....+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 185 (298)
T 3qre_A 107 AKAKDANLADLVGERPP-HFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL 185 (298)
T ss_dssp --------------CCT-TGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHH-HHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHh
Confidence 1111111222334 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred hCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc-CchhhhhhhccCCCCChHHHHHHHHHHHH
Q 004891 154 VGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARL 232 (725)
Q Consensus 154 vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (725)
+|..+|++|+++|++++|+||+++||||+|||++++.+++.++|++|+.. ||.++
T Consensus 186 vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~------------------------ 241 (298)
T 3qre_A 186 TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSM------------------------ 241 (298)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHH------------------------
T ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999998 76433
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
..+|++++.....+++++++.|...+..++.|+|++|++++|++||+|...+
T Consensus 242 ------------~~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~~ 293 (298)
T 3qre_A 242 ------------AVIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFPS 293 (298)
T ss_dssp ------------HHHHHHHHGGGGC---------------------------------------
T ss_pred ------------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 3568889999999999999999999999999999999999999999998654
No 40
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=7.1e-50 Score=412.79 Aligned_cols=253 Identities=21% Similarity=0.276 Sum_probs=227.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CC-CCCcCCCCchhhhhccCCC
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NG-GRFSGGFDINVFQKVHGAG 77 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g-~g-~~F~aG~Dl~~~~~~~~~~ 77 (725)
|+|+.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+ +|+||||| .| ++||+|+|++++.......
T Consensus 1 m~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~~ 78 (261)
T 1ef8_A 1 MSYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDP 78 (261)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----CT
T ss_pred CCcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCchh
Confidence 8899999999 7899999999995 89999999999999999999999 99999999 98 9999999999886432111
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
. .......+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 79 -~-~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 155 (261)
T 1ef8_A 79 -L-SYDDPLRQIT-RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFH 155 (261)
T ss_dssp -T-CTTSHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHH
T ss_pred -H-HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHH
Confidence 1 1223345666 669999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.+++++++..|+.++
T Consensus 156 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------- 206 (261)
T 1ef8_A 156 IVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAI----------------------------- 206 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999886433
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH--HHhCCHhHHHHHHHHHhhhhhcC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~--~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.....+++++++.|.+.+. .++.|+|+++++++|++||+|..
T Consensus 207 -------~~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~~ 258 (261)
T 1ef8_A 207 -------AVIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNF 258 (261)
T ss_dssp -------HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred -------HHHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCCC
Confidence 256778888888888999999999999 99999999999999999988774
No 41
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=415.71 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=224.8
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (725)
..+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 33 ~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~ 111 (287)
T 2vx2_A 33 RPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEV 111 (287)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHH
Confidence 5688888 7899999999995 7999999999999999999999999999999999999999999987543211111112
Q ss_pred chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHH
Q 004891 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (725)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (725)
.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |++++|..+|++|
T Consensus 112 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~l 189 (287)
T 2vx2_A 112 FQTCSKVM-MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEM 189 (287)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHH
Confidence 22344556 669999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (725)
++||++++|+||+++||||+|||++++.+++.++|++|++.++.++
T Consensus 190 lltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~---------------------------------- 235 (287)
T 2vx2_A 190 LFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVV---------------------------------- 235 (287)
T ss_dssp HHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH----------------------------------
T ss_pred HHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999887433
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.....+++++++.|.+.+..++.|+|+++++++|++||+|.+
T Consensus 236 --~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 285 (287)
T 2vx2_A 236 --SLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVW 285 (287)
T ss_dssp --HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred --HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 24677888888889999999999999999999999999999999988764
No 42
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=2.8e-50 Score=414.86 Aligned_cols=248 Identities=26% Similarity=0.325 Sum_probs=206.6
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 004891 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (725)
Q Consensus 5 ~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (725)
.|.++. +++|++||||||+ .|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++....... ...
T Consensus 12 ~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~-- 87 (262)
T 3r9q_A 12 AVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNE-LHP-- 87 (262)
T ss_dssp SEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCC-CCT--
T ss_pred EEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhh-HHH--
Confidence 588998 7899999999995 79999999999999999999999999999999999999999999987543221 110
Q ss_pred hhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHH
Q 004891 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (725)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (725)
.....++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|+
T Consensus 88 ~~~~~~~-~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ 166 (262)
T 3r9q_A 88 HGPGPMG-PSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLI 166 (262)
T ss_dssp TSSCTTS-STTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred hhhhHHH-HHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 0011122 336789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 004891 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (725)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (725)
+||++++|+||+++||||+|||++++.+++.++|++|++.|+.++
T Consensus 167 ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------------- 211 (262)
T 3r9q_A 167 LTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCV----------------------------------- 211 (262)
T ss_dssp HHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHH-----------------------------------
T ss_pred HcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999987543
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+ +..++.| |++|++++|++||+|.+.
T Consensus 212 -~~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p~~~ 260 (262)
T 3r9q_A 212 -RADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGRHGA 260 (262)
T ss_dssp -HHHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC-------------------
T ss_pred -HHHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCCCCC
Confidence 356888999999999999999999 9999999 999999999999988753
No 43
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=2e-49 Score=409.24 Aligned_cols=253 Identities=18% Similarity=0.179 Sum_probs=217.8
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC-CCc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-AGD 78 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~-~~~ 78 (725)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.| ++|+|||||.|++||+|+|++++..... ...
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 81 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK 81 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH
Confidence 7788999999 8999999999995 7999999999999999999986 6999999999999999999999876421 122
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
..........++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|..+
T Consensus 82 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~ 159 (267)
T 3hp0_A 82 QASSQEPLYDLW-MKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQK 159 (267)
T ss_dssp SCCCCHHHHHHH-HHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHH
Confidence 233444555667 679999999999999999999999999999999999999999999999999875 778999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (725)
|++|++||++++|+||+++||||+|||+.+ +.+.++++++++.||.+++
T Consensus 160 A~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~----------------------------- 208 (267)
T 3hp0_A 160 AHYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIA----------------------------- 208 (267)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999998654 3467899999998875433
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|++++... ..++++++.|.+.+..++.|+|++|++++|++||+|.+.+
T Consensus 209 -------~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~~ 258 (267)
T 3hp0_A 209 -------HYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWED 258 (267)
T ss_dssp -------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC----
T ss_pred -------HHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 4566777653 3467888899999999999999999999999999999765
No 44
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=7.1e-50 Score=416.37 Aligned_cols=254 Identities=25% Similarity=0.347 Sum_probs=215.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (725)
.++|.++. +++|++||||||+ .|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++...........
T Consensus 19 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 97 (278)
T 4f47_A 19 GPDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD 97 (278)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC-------------------
T ss_pred CCceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHH
Confidence 35688898 7899999999995 799999999999999999999999999999999999999999999875432211110
Q ss_pred cchhHHHHHHHHHh---hCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 82 MPDVSVELVVNLIE---DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 82 ~~~~~~~~~~~~l~---~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
......++ +.+. ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 98 -~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~ 175 (278)
T 4f47_A 98 -GSYDPSRI-DALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTV 175 (278)
T ss_dssp ----CTTCB-TTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHH
T ss_pred -HHHHHHHH-HHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHH
Confidence 00111223 3455 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (725)
|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.++.++
T Consensus 176 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 225 (278)
T 4f47_A 176 ACDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAV------------------------------ 225 (278)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHH------------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887533
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 226 ------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~f~ 276 (278)
T 4f47_A 226 ------QAILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPNFQ 276 (278)
T ss_dssp ------HHHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 356889999999999999999999999999999999999999999988753
No 45
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=2.9e-49 Score=411.62 Aligned_cols=256 Identities=20% Similarity=0.314 Sum_probs=227.1
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC---
Q 004891 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (725)
+|++|.++.++++|++||||||+ .|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++.......
T Consensus 1 ~~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 80 (275)
T 1dci_A 1 AYESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGD 80 (275)
T ss_dssp CCSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCS
T ss_pred CCceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 36778898855789999999995 89999999999999999999999999999999999999999999986431100
Q ss_pred c-------ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchH
Q 004891 78 D-------VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRL 150 (725)
Q Consensus 78 ~-------~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l 150 (725)
+ ...+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l 159 (275)
T 1dci_A 81 DVARIAWYLRDLISRYQKTF-TVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRL 159 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHG
T ss_pred hhhhhhHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHH
Confidence 0 001112234455 56899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCH-HHHHHHHHcCCCCCHHHHHHcCCcceecCc-chHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHH
Q 004891 151 PRLVGL-SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 228 (725)
Q Consensus 151 ~r~vG~-~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~-~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (725)
++++|. .+|++|++||++++|+||+++||||+|||+ +++.+++.++|+++++.||.+++
T Consensus 160 ~r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~------------------- 220 (275)
T 1dci_A 160 PKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQ------------------- 220 (275)
T ss_dssp GGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHH-------------------
T ss_pred HHHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHH-------------------
Confidence 999999 999999999999999999999999999999 99999999999999999875333
Q ss_pred HHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhh---hhhcC
Q 004891 229 LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSK 294 (725)
Q Consensus 229 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~---r~~~~ 294 (725)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++| |+|..
T Consensus 221 -----------------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f 272 (275)
T 1dci_A 221 -----------------GSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITF 272 (275)
T ss_dssp -----------------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGCCC
T ss_pred -----------------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 56778888888899999999999999999999999999999999 77764
No 46
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.1e-49 Score=411.90 Aligned_cols=253 Identities=23% Similarity=0.242 Sum_probs=224.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhc-c-CCCccc
Q 004891 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV-H-GAGDVS 80 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~-~-~~~~~~ 80 (725)
++.+.++.++++|++||||||+.|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++ +... . ......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~ 87 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALL 87 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHH
Confidence 456888774578999999999999999999999999999999999999999999999999999999 7542 1 101011
Q ss_pred ccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHH
Q 004891 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (725)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (725)
.+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 88 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 88 RVFWEARDLV-LGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 1223344566 669999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 004891 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (725)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (725)
+|+++|++++|+||+++||||+|||++++.+++.+++++++..++.++
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~-------------------------------- 214 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEAL-------------------------------- 214 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHH--------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999876433
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++..... ++++++.|.+.+..++.|+|+++++++|++||+|..
T Consensus 215 ----~~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 263 (264)
T 1wz8_A 215 ----HHTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPPEF 263 (264)
T ss_dssp ----HHHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred ----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCCCC
Confidence 2457778877777 899999999999999999999999999999988763
No 47
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=1.7e-49 Score=412.01 Aligned_cols=256 Identities=24% Similarity=0.285 Sum_probs=216.2
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-----CC-CCCcCCCCchhhhhcc
Q 004891 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-----NG-GRFSGGFDINVFQKVH 74 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g-----~g-~~F~aG~Dl~~~~~~~ 74 (725)
+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+||||| .| ++||+|+|++++....
T Consensus 8 ~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~ 86 (275)
T 4eml_A 8 HYDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGG 86 (275)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC------
T ss_pred CCceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhccc
Confidence 367899999 7999999999995 79999999999999999999999999999999 88 5999999999986421
Q ss_pred CCCcccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhh
Q 004891 75 GAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (725)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~v 154 (725)
..............++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~v 165 (275)
T 4eml_A 87 YIDDQGTPRLNVLDLQ-RLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIV 165 (275)
T ss_dssp --------CCCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHH
T ss_pred ccchhhHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHh
Confidence 1111111112234566 679999999999999999999999999999999999999999999999999998999999999
Q ss_pred CHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 004891 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (725)
Q Consensus 155 G~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (725)
|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 166 G~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 220 (275)
T 4eml_A 166 GQKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIR------------------------- 220 (275)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999999999999875433
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|++++..... .....+.|.+.+..++.|+|++|++++|++||+|....
T Consensus 221 -----------~~K~~l~~~~~~-~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 270 (275)
T 4eml_A 221 -----------CLKAAFNADCDG-QAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFSQ 270 (275)
T ss_dssp -----------HHHHHHHHTTSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCTT
T ss_pred -----------HHHHHHHhhhcc-chhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 456667665432 34445677788889999999999999999999987543
No 48
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=6.4e-50 Score=413.66 Aligned_cols=253 Identities=27% Similarity=0.413 Sum_probs=224.0
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCCccc
Q 004891 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
++.|.++. +++|++|||||| +.|+||.+|+++|.++++++++|+++|+|||||.| ++||+|+|++++.........
T Consensus 8 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~- 85 (267)
T 3r9t_A 8 APGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHP- 85 (267)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCT-
T ss_pred CCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhH-
Confidence 46799999 789999999999 58999999999999999999999999999999999 599999999998754322211
Q ss_pred ccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHH
Q 004891 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (725)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (725)
.........+ . +.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 86 ~~~~~~~~~~-~-~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 163 (267)
T 3r9t_A 86 DHPEWGFAGY-V-RHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAM 163 (267)
T ss_dssp TCGGGCGGGT-T-TCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHH
T ss_pred HHHhHHHHHH-H-HHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHH
Confidence 1011100112 1 3489999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 004891 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (725)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (725)
+|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 164 ~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 212 (267)
T 3r9t_A 164 RLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQ------------------------------- 212 (267)
T ss_dssp HHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998875333
Q ss_pred ChhHHHHHHH---HHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 241 MPQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 241 ~~a~~~~~~~---~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
.+|++ ++.+...+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 213 -----~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 265 (267)
T 3r9t_A 213 -----ASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPVWQ 265 (267)
T ss_dssp -----HHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56777 788888889999999999999999999999999999999988753
No 49
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=2.1e-49 Score=412.66 Aligned_cols=252 Identities=22% Similarity=0.286 Sum_probs=210.5
Q ss_pred CCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc--
Q 004891 2 AAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD-- 78 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~-- 78 (725)
+++.+.++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++ +|||||.|++||+|+|++++........
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 101 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEE 101 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHH
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhH
Confidence 467788998 789999999999 58999999999999999999999999 9999999999999999998864321110
Q ss_pred -ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
...+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 102 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 180 (280)
T 2f6q_A 102 KAKNNAVLLREFV-GCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPA 180 (280)
T ss_dssp HHHHHHHHHHHHH-HHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHH
Confidence 001112334555 669999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|++||++++|+||+++||||+|||++++.+++.++|++++..++.++
T Consensus 181 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------- 231 (280)
T 2f6q_A 181 KATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNAL----------------------------- 231 (280)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999876432
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhh
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~ 292 (725)
..+|+.++.....+++++++.|.+.+..++.|+|+++++++|++||+|
T Consensus 232 -------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 232 -------RISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp -------HHHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred -------HHHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 245677777777778999999999999999999999999999999876
No 50
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=2.7e-49 Score=408.60 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=217.8
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 004891 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 13 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 91 (265)
T 3qxi_A 13 TEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEG 91 (265)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETT
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhh
Confidence 357799999 7999999999995 79999999999999999999999999999999999999999999986533211111
Q ss_pred ccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHH
Q 004891 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (725)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (725)
... . + ..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 92 ---~~~-~-~-~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 164 (265)
T 3qxi_A 92 ---RGL-G-F-TERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAM 164 (265)
T ss_dssp ---TEE-T-T-TTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred ---hhh-h-H-HHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHH
Confidence 111 1 2 22444 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 004891 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (725)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (725)
+|+++|++++|+||+++||||+|||++++.+++.++|+++++.+|.++
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~-------------------------------- 212 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAV-------------------------------- 212 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHH--------------------------------
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999887533
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+.
T Consensus 213 ----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3qxi_A 213 ----AATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRWT 263 (265)
T ss_dssp ----HHHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 356788888888999999999999999999999999999999999988754
No 51
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=1e-49 Score=411.18 Aligned_cols=249 Identities=21% Similarity=0.305 Sum_probs=212.9
Q ss_pred EEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC-CCCCcCCCCchhhhhccCCCcccccchh
Q 004891 7 TMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMPDV 85 (725)
Q Consensus 7 ~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 85 (725)
.++. +++|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||. |++||+|+|++++.... ......+...
T Consensus 8 ~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~-~~~~~~~~~~ 85 (260)
T 1sg4_A 8 EPDA-GAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRS-PAHYAGYWKA 85 (260)
T ss_dssp EEET-TTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCC-HHHHHHHHHH
T ss_pred EEEe-cCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccC-HHHHHHHHHH
Confidence 3444 6899999999998899999999999999999999999999999999 79999999999885421 1111122233
Q ss_pred HHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEee--CCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHH
Q 004891 86 SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (725)
Q Consensus 86 ~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~--~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (725)
.+.++ +.|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|++++|..+|++|+
T Consensus 86 ~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ll 164 (260)
T 1sg4_A 86 VQELW-LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERAL 164 (260)
T ss_dssp HHHHH-HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHHH
Confidence 44556 67999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 004891 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (725)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (725)
++|++++|+||+++||||+|+|++++.+++.++|++++..|+.+++
T Consensus 165 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 210 (260)
T 1sg4_A 165 QLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQ---------------------------------- 210 (260)
T ss_dssp HHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------------
T ss_pred HcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999998864332
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
.+|++++.....+++++++.|.+.+..++.|+|+++++++|++||+++|
T Consensus 211 --~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 211 --LTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp --HHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred --HHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 4567777776677888899999999999999999999999999999876
No 52
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=7.9e-49 Score=407.13 Aligned_cols=252 Identities=26% Similarity=0.336 Sum_probs=217.9
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CCcCCCCchhhhhccCCCccc
Q 004891 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~-~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
|+.|.++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|+ +||+|+|++++..... ....
T Consensus 12 ~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~-~~~~ 89 (273)
T 2uzf_A 12 YDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGY-VGED 89 (273)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC---------CCS
T ss_pred CceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhcccc-chhh
Confidence 45688888 789999999999 589999999999999999999999999999999998 9999999998854211 1111
Q ss_pred cc-chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 81 LM-PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 81 ~~-~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
.+ ......++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 90 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A 168 (273)
T 2uzf_A 90 QIPRLNVLDLQ-RLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKA 168 (273)
T ss_dssp SSCCCTHHHHH-HHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHH
T ss_pred hHHHhhHHHHH-HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHH
Confidence 11 11133555 66899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|+++|++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 169 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 218 (273)
T 2uzf_A 169 REIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR------------------------------ 218 (273)
T ss_dssp HHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998874332
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHH-HHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~-~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
.+|++++ ...+++++++.|. +.+..++.|+|+++++++|++||+|...
T Consensus 219 ------~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f~ 267 (273)
T 2uzf_A 219 ------FLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFD 267 (273)
T ss_dssp ------HHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCS
T ss_pred ------HHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCCC
Confidence 3455665 2356889999999 9999999999999999999999988753
No 53
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=1e-49 Score=413.33 Aligned_cols=253 Identities=22% Similarity=0.264 Sum_probs=216.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC-cccc
Q 004891 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (725)
+++|.++.++++|++||||||+.|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++....... ....
T Consensus 12 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 12 FPSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp CTTEEEEECSTTEEEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 578999994458999999999999999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (272)
T 3qk8_A 92 IMREARDLV-LNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKY 170 (272)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 223344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|++||++++|+||+++||||+|||++++.+++.++|++|+..++.+++
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 218 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR-------------------------------- 218 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999875443
Q ss_pred hhHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 242 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|++++.... .+++..++.| ..++.|+|++|++++|++||+|....
T Consensus 219 ----~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f~g 268 (272)
T 3qk8_A 219 ----WTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARFTD 268 (272)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC--
T ss_pred ----HHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 34455544332 3344555544 47899999999999999999987543
No 54
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=4e-49 Score=410.02 Aligned_cols=251 Identities=19% Similarity=0.293 Sum_probs=205.6
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC--CCc-
Q 004891 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD- 78 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~--~~~- 78 (725)
++.+.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... ...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 86 (276)
T 2j5i_A 8 WKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL 86 (276)
T ss_dssp CSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred CceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence 56788988 789999999999 5899999999999999999999999999999999999999999998753211 110
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
...+.......+...|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 166 (276)
T 2j5i_A 87 QEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQ 166 (276)
T ss_dssp HHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHH
Confidence 01111111222125588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (725)
|++|++||++++|+||+++||||+|||++++.+++.++|+++++.||.+++
T Consensus 167 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~----------------------------- 217 (276)
T 2j5i_A 167 SLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR----------------------------- 217 (276)
T ss_dssp HHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875433
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH--hCCH-hHHHHHHHHHhhh
Q 004891 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR 290 (725)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~--~~s~-~~~~~i~aF~~~r 290 (725)
.+|++++.....+++++++.|.+.+..+ +.|+ |++|++++|++||
T Consensus 218 -------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr 265 (276)
T 2j5i_A 218 -------AAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDK 265 (276)
T ss_dssp -------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------
T ss_pred -------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcc
Confidence 5678888888889999999998887766 6799 9999999999998
No 55
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=3e-49 Score=409.94 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=222.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC-cccc
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (725)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 106 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAK 106 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHH
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHH
Confidence 4688888 7899999999996 89999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 107 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~e 185 (276)
T 3rrv_A 107 TIRDGREIV-LGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE 185 (276)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 233344566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|+++|++++|+||+++||||+|| +++.+++.++|+++++.|+.+++
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~-------------------------------- 231 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVE-------------------------------- 231 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 99999999999999999999999 89999999999999999875433
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhh
Q 004891 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r 290 (725)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||
T Consensus 232 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 232 ----STKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred ----HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 567788877777899999999999999999999999999999986
No 56
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=5.9e-49 Score=410.14 Aligned_cols=258 Identities=24% Similarity=0.342 Sum_probs=216.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCC-C
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA-G 77 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~-~ 77 (725)
|++++|.++.+.++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.| ++||+|+|++++...... .
T Consensus 24 ~~~~~v~~~~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~~ 103 (289)
T 3t89_A 24 EGFEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYKD 103 (289)
T ss_dssp TTCSSEEEEEETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC----------
T ss_pred CCCCeEEEEEecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccchh
Confidence 457789999932899999999995 7999999999999999999999999999999999 499999999988542211 1
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
...........++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|++++|..
T Consensus 104 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~~ 182 (289)
T 3t89_A 104 DSGVHHLNVLDFQ-RQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQK 182 (289)
T ss_dssp ------CTHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCHH
T ss_pred hhHHHHHHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCHH
Confidence 1111112244556 679999999999999999999999999999999999999999999999888888899999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.++|++|+..++.+++
T Consensus 183 ~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~---------------------------- 234 (289)
T 3t89_A 183 KAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALR---------------------------- 234 (289)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 235 --------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~~ 284 (289)
T 3t89_A 235 --------CLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSK 284 (289)
T ss_dssp --------HHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCCTT
T ss_pred --------HHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 45667766543 233444577888889999999999999999999988544
No 57
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.3e-49 Score=409.98 Aligned_cols=247 Identities=24% Similarity=0.312 Sum_probs=192.8
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 004891 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++....... ..
T Consensus 10 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~ 87 (258)
T 3lao_A 10 GPGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAAS-GF 87 (258)
T ss_dssp SSCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTT-BC
T ss_pred CCCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchh-hH
Confidence 356799999 7899999999995 79999999999999999999999999999999999999999999987643222 11
Q ss_pred ccchhHHHHHHHHH-hhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHH
Q 004891 81 LMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 81 ~~~~~~~~~~~~~l-~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
.+.....+.+ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 88 ~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 166 (258)
T 3lao_A 88 RYPDGGVDPW-GVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDA 166 (258)
T ss_dssp CCCTTCCCTT-SCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 2222222344 558 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|+++|++++|+||+++||||+|||++++.+++.++|+++++.||.++
T Consensus 167 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------- 215 (258)
T 3lao_A 167 MRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAV------------------------------- 215 (258)
T ss_dssp HHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHH-------------------------------
T ss_pred HHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999887533
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 287 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 216 -----~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 216 -----RAALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp -----HHHHHHHHHHTC-------------------------------
T ss_pred -----HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 3568889988888999999999999999999999999999995
No 58
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=7.6e-49 Score=406.48 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=219.0
Q ss_pred CCCCcEEEE----EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC
Q 004891 1 MAAPRVTME----VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75 (725)
Q Consensus 1 M~~~~i~~~----~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~ 75 (725)
|+ +.+.++ . +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.....
T Consensus 5 m~-~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 82 (267)
T 3oc7_A 5 MD-ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS 82 (267)
T ss_dssp CC-SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC---------
T ss_pred cc-cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC
Confidence 45 567888 6 7899999999995 799999999999999999999999999999999999999999999862111
Q ss_pred CCcc----cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHh
Q 004891 76 AGDV----SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (725)
Q Consensus 76 ~~~~----~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~ 151 (725)
.... ..+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (267)
T 3oc7_A 83 PSSAYDMAVERAREMAALM-RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161 (267)
T ss_dssp --CHHHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT
T ss_pred chhhhhhHHHHHHHHHHHH-HHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH
Confidence 1111 01233445566 679999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHH
Q 004891 152 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231 (725)
Q Consensus 152 r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (725)
++|..+|++|+++|++++|+||+++||||+| ++++.+++.++++++++.|+.+++
T Consensus 162 -~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~---------------------- 216 (267)
T 3oc7_A 162 -KLSARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLA---------------------- 216 (267)
T ss_dssp -TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHH----------------------
T ss_pred -HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHH----------------------
Confidence 9999999999999999999999999999999 788999999999999998875433
Q ss_pred HHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 232 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 232 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 217 --------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 265 (267)
T 3oc7_A 217 --------------ASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPNW 265 (267)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCTT
T ss_pred --------------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 5677888888888999999999999999999999999999999998875
No 59
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=3e-49 Score=412.71 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=218.3
Q ss_pred CCCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC--
Q 004891 2 AAPRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~-- 77 (725)
+|+.|.++. +++|++|||| || +.|+||.+|+++|.+++++++.|+. |+|||||.|++||+|+|++++.......
T Consensus 21 ~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 21 TYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 467789998 7899999999 68 5799999999999999999998875 9999999999999999999985421100
Q ss_pred -cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCH
Q 004891 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (725)
Q Consensus 78 -~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~ 156 (725)
....+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 177 (291)
T 2fbm_A 99 TASLEMVDTIKNFV-NTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK 177 (291)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH
Confidence 0111222344556 66899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHH
Q 004891 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (725)
Q Consensus 157 ~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (725)
.+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.||.++
T Consensus 178 ~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~---------------------------- 229 (291)
T 2fbm_A 178 ASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVL---------------------------- 229 (291)
T ss_dssp HHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHH----------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999887533
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHH-HhhhhhcCCC
Q 004891 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSKVP 296 (725)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF-~~~r~~~~~~ 296 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++.+| ++||+|....
T Consensus 230 --------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f~~ 282 (291)
T 2fbm_A 230 --------EECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAFPP 282 (291)
T ss_dssp --------HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC-----------
T ss_pred --------HHHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 256778887777788999999999999999999999999999 9999987543
No 60
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=3.6e-49 Score=405.17 Aligned_cols=247 Identities=24% Similarity=0.313 Sum_probs=201.0
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCCCcCCCCchhhhhccCCCcccccc
Q 004891 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLMP 83 (725)
Q Consensus 6 i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (725)
|.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+||||| .|++||+|+|++++...........+.
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 80 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI 80 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHH
Confidence 66777 789999999999 589999999999999999999999999999999 999999999999986532111001222
Q ss_pred hhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHH
Q 004891 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (725)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (725)
....+++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..+|++|+
T Consensus 81 ~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ 158 (250)
T 2a7k_A 81 DRVIDLY-QAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEII 158 (250)
T ss_dssp HHHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHH
Confidence 2344556 67999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 004891 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (725)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (725)
++|++++|+||+++||||+|+|++++.+++.++++++++.||.++
T Consensus 159 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~----------------------------------- 203 (250)
T 2a7k_A 159 YQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAF----------------------------------- 203 (250)
T ss_dssp HHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHH-----------------------------------
T ss_pred HcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHH-----------------------------------
Confidence 999999999999999999999999999999999999999887433
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhh
Q 004891 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (725)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 291 (725)
..+|++++.....+++++++.|.+.+..++.|+|+++++++|++||+
T Consensus 204 -~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 204 -INTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred -HHHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 24577777777778899999999999999999999999999999874
No 61
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=4.3e-49 Score=406.93 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=223.5
Q ss_pred CCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCC---
Q 004891 3 APRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (725)
|++|.++. +++|++|||| || +.|+||.+|+++|.+++++++.|+ +|+|||||.|++||+|+|++++.......
T Consensus 4 ~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (261)
T 2gtr_A 4 YRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKR 81 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHH
T ss_pred cceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhh
Confidence 56789998 7899999999 58 589999999999999999999887 49999999999999999999885421100
Q ss_pred cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
....+......++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 82 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 160 (261)
T 2gtr_A 82 ESTKMAEAIRNFV-NTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 160 (261)
T ss_dssp HHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHH
Confidence 0111222344556 668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|++||++++|+||+++||||+|||++++.+++.++++++++.||.+++
T Consensus 161 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 212 (261)
T 2gtr_A 161 SANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLE---------------------------- 212 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875332
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhc
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~ 293 (725)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|.
T Consensus 213 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P~ 260 (261)
T 2gtr_A 213 --------ESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDE 260 (261)
T ss_dssp --------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHC
T ss_pred --------HHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCC
Confidence 567788877777889999999999999999999999999999999886
No 62
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=1.1e-48 Score=403.45 Aligned_cols=253 Identities=33% Similarity=0.431 Sum_probs=224.1
Q ss_pred CCCcEEEEEe--cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc
Q 004891 2 AAPRVTMEVG--NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (725)
Q Consensus 2 ~~~~i~~~~~--~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (725)
+|+.+.++.. .++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 81 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDC 81 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHH
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHH
Confidence 4677777762 5689999999994 799999999999999999999999999999999999999999998753211000
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
........+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 82 ---~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 157 (260)
T 1mj3_A 82 ---YSGKFLSHW-DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157 (260)
T ss_dssp ---HHC--CCGG-GGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHH
T ss_pred ---HHHHHHHHH-HHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 000011123 4588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhC
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (725)
|++|+++|++++|+||+++||||+|||++++.+++.+++++++..++.++
T Consensus 158 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~------------------------------ 207 (260)
T 1mj3_A 158 AMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIV------------------------------ 207 (260)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHH------------------------------
T ss_pred HHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHH------------------------------
Confidence 99999999999999999999999999999999999999999999887533
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
..+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|..
T Consensus 208 ------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~~ 257 (260)
T 1mj3_A 208 ------AMAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANF 257 (260)
T ss_dssp ------HHHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred ------HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 35688899888889999999999999999999999999999999988764
No 63
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=8.8e-49 Score=402.99 Aligned_cols=248 Identities=24% Similarity=0.353 Sum_probs=220.6
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhcc--CCCccccc
Q 004891 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH--GAGDVSLM 82 (725)
Q Consensus 6 i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 82 (725)
+.++ +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.... ........
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 79 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRH 79 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHH
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHH
Confidence 4555 5789999999995 89999999999999999999999999999999999999999999886531 11100010
Q ss_pred chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHH
Q 004891 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (725)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (725)
....+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|++++|..+|++|
T Consensus 80 ~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l 157 (253)
T 1uiy_A 80 SLSLMRLF-HRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDL 157 (253)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHH
Confidence 01134556 669999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (725)
+++|++++|+||+++||||+|||++++.+++.++++++++.||.++
T Consensus 158 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~---------------------------------- 203 (253)
T 1uiy_A 158 LLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSL---------------------------------- 203 (253)
T ss_dssp HHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHH----------------------------------
T ss_pred HHhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999886432
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhc
Q 004891 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (725)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~ 293 (725)
..+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|.
T Consensus 204 --~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p~ 252 (253)
T 1uiy_A 204 --RLTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPPR 252 (253)
T ss_dssp --HHHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCCC
T ss_pred --HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCCC
Confidence 3567888888889999999999999999999999999999999998765
No 64
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=1.5e-48 Score=407.06 Aligned_cols=248 Identities=21% Similarity=0.286 Sum_probs=222.8
Q ss_pred CCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCC-CcCCCCchhhhhccCCCc--
Q 004891 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGD-- 78 (725)
Q Consensus 2 ~~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~-F~aG~Dl~~~~~~~~~~~-- 78 (725)
+++.|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|+. ||+|+|++++........
T Consensus 6 ~~~~v~~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~ 84 (289)
T 3h0u_A 6 SYETIKARL-DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKA 84 (289)
T ss_dssp CCSSEEEEE-ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTT
T ss_pred CCCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhh
Confidence 368899999 7999999999999999999999999999999999999999999999965 566779999865321110
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~ 157 (725)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|++++|..
T Consensus 85 ~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~ 163 (289)
T 3h0u_A 85 GGPGDASLGMLF-RKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRG 163 (289)
T ss_dssp SSTTCCSHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHH
Confidence 012334455666 6799999999999999999999999999999999998 99999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHh
Q 004891 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (725)
Q Consensus 158 ~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (725)
+|++|+++|++++|+||+++||||+|||++++.+++.++|++|++.||.++
T Consensus 164 ~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~----------------------------- 214 (289)
T 3h0u_A 164 RALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDAL----------------------------- 214 (289)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHH-----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999999887533
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHh
Q 004891 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 288 (725)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~ 288 (725)
..+|++++.... +++++++.|.+.+..++.|+|++|++++|++
T Consensus 215 -------~~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 215 -------IAAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp -------HHHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred -------HHHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 356788888877 8999999999999999999999999999999
No 65
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=5.7e-49 Score=416.45 Aligned_cols=256 Identities=24% Similarity=0.268 Sum_probs=188.0
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-------CCcCCCCchhhhhc
Q 004891 3 APRVTMEVG-NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-------RFSGGFDINVFQKV 73 (725)
Q Consensus 3 ~~~i~~~~~-~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~-------~F~aG~Dl~~~~~~ 73 (725)
++.|.++.+ +++|++||||||+ +|+||.+|+++|.++|+.++.|++||+|||||.|+ +||+|+|++++...
T Consensus 54 ~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~ 133 (334)
T 3t8b_A 54 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS 133 (334)
T ss_dssp CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--
T ss_pred CceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcc
Confidence 567999983 4899999999995 79999999999999999999999999999999996 89999999987532
Q ss_pred cC----C------CcccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEee-CCceEeCcccccCCCC
Q 004891 74 HG----A------GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIP 142 (725)
Q Consensus 74 ~~----~------~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~-~~a~~~~pe~~~Gl~p 142 (725)
.. . ............++ +.|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 134 GYQYASGDTADTVDVARAGRLHILEVQ-RLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp --------------------CCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred cccccccccchhhhHHHHHHHHHHHHH-HHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 11 0 00111112233555 67999999999999999999999999999999999 9999999999999999
Q ss_pred CchhhchHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHH
Q 004891 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222 (725)
Q Consensus 143 ~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (725)
++|++++|+|++|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.+|.+++
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~------------- 279 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQR------------- 279 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999875433
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|++++.... .+.+.+..|.+.+..++.|+|++|++.+|++||+|...+
T Consensus 280 -----------------------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~~ 329 (334)
T 3t8b_A 280 -----------------------MLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSP 329 (334)
T ss_dssp -----------------------HHHHHHHHTCC-CC-------------------------------------
T ss_pred -----------------------HHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 45677776644 455566778888899999999999999999999988543
No 66
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=1.4e-48 Score=402.97 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=207.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccC--C-C
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--A-G 77 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~--~-~ 77 (725)
|+++.+.++..+++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... . .
T Consensus 3 ~~~~~~~~~~~~~~v~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 82 (263)
T 3l3s_A 3 LSQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEG 82 (263)
T ss_dssp -----CEEEEESSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCS
T ss_pred CCccceEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 346677777768899999999995599999999999999999999999999999999999999999999865310 0 1
Q ss_pred --cccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhC
Q 004891 78 --DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (725)
Q Consensus 78 --~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG 155 (725)
....+......++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|
T Consensus 83 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~-~~g~~~~l~r~vG 160 (263)
T 3l3s_A 83 RAFVTDLFEACSALM-LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGF-CTTPAVAVSRVIG 160 (263)
T ss_dssp HHHHHHHHHHHHHHH-HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSC-CHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCC-CccHHHHHHHHcC
Confidence 1112233344556 67999999999999999999999999999999999999999999999999 5778999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHH
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (725)
..+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.||.++
T Consensus 161 ~~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~--------------------------- 213 (263)
T 3l3s_A 161 RRAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPL--------------------------- 213 (263)
T ss_dssp HHHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHH---------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999887533
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhh
Q 004891 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289 (725)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~ 289 (725)
..+|++++.....+++++++.|.+.+..++.|+|++|++++|-+.
T Consensus 214 ---------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 214 ---------RRGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp ---------HHHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred ---------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 356888999999999999999999999999999999999999864
No 67
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=6.3e-49 Score=403.10 Aligned_cols=244 Identities=25% Similarity=0.380 Sum_probs=201.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (725)
++.+.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++... . .
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~---~---~ 80 (256)
T 3pe8_A 8 SPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDT---T---E 80 (256)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhh---H---H
Confidence 56789998 8999999999995 7999999999999999999999999999999999999999999988642 1 0
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
..... +.+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 81 ----~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 155 (256)
T 3pe8_A 81 ----LPDIS-PKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARR 155 (256)
T ss_dssp --------C-CCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred ----HHHHH-HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHH
Confidence 11222 4588999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVR-------------------------------- 203 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH---hCCHhHHHHHHHHHhhhhhcC
Q 004891 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL---VMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~---~~s~~~~~~i~aF~~~r~~~~ 294 (725)
.+|++++.....+++++++.|.+.+..+ ..++|+++++.+|++|+++.+
T Consensus 204 ----~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~~ 255 (256)
T 3pe8_A 204 ----ALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQV 255 (256)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCccC
Confidence 5678888888888999999999997654 677788999999999999864
No 68
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.4e-48 Score=398.41 Aligned_cols=242 Identities=26% Similarity=0.354 Sum_probs=210.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccc
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (725)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++++++| ++|+|||||.|++||+|+|++... ....
T Consensus 20 ~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~~~ 91 (264)
T 3he2_A 20 GSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FAAD 91 (264)
T ss_dssp --CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TGGG
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hhHH
Confidence 45688888 7899999999995 8999999999999999999988 999999999999999999998321 1122
Q ss_pred cchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
+.....+++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (264)
T 3he2_A 92 YPDRLIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA 170 (264)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHH
Confidence 233445566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|+++|++++|+||+++||||+|++ .+++.++|+++++.||.+++
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a~~-------------------------------- 214 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQ-------------------------------- 214 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999996 46789999999998875433
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCC
Q 004891 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~ 295 (725)
.+|++++.. .+++++++.|.+.+..++.|+|++|++.+|++||+|...
T Consensus 215 ----~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~ 262 (264)
T 3he2_A 215 ----HAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKFQ 262 (264)
T ss_dssp ----HHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ----HHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 456777765 346677888999999999999999999999999998753
No 69
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=5.6e-48 Score=399.95 Aligned_cols=243 Identities=28% Similarity=0.448 Sum_probs=216.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
|+ +.|.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ....
T Consensus 22 m~-~~v~~~~-~~~Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 98 (277)
T 4di1_A 22 MN-EFVSVVA-DQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA-PEAD 98 (277)
T ss_dssp -C-CSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH-HHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh-HHHH
Confidence 45 5688998 7999999999995599999999999999999999999999999999999999999999875321 1122
Q ss_pred ccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHH
Q 004891 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (725)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (725)
.+.....+++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 99 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 177 (277)
T 4di1_A 99 TAARVRLEAI-DAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAK 177 (277)
T ss_dssp HHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHH
Confidence 2333445566 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 004891 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (725)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (725)
+|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 178 ~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~-------------------------------- 225 (277)
T 4di1_A 178 ELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRAL-------------------------------- 225 (277)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHH--------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999887533
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhc
Q 004891 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (725)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~ 293 (725)
..+|++++.....+++++++.|.+.+..++.|+ +||+|.
T Consensus 226 ----~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~ 264 (277)
T 4di1_A 226 ----AAAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDG 264 (277)
T ss_dssp ----HHHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC----
T ss_pred ----HHHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCc
Confidence 367889999999999999999999999999998 888877
No 70
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=6.8e-48 Score=399.89 Aligned_cols=253 Identities=26% Similarity=0.410 Sum_probs=219.2
Q ss_pred CcEEEEE---ecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCCc
Q 004891 4 PRVTMEV---GNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD 78 (725)
Q Consensus 4 ~~i~~~~---~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~ 78 (725)
..+.++. .+++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~ 86 (272)
T 1hzd_A 8 DELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-SE 86 (272)
T ss_dssp CSEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-HH
T ss_pred CcEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-HH
Confidence 3455543 25789999999995 8999999999999999999999999999999998 69999999998864211 11
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
...+.....+++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 87 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 165 (272)
T 1hzd_A 87 VGPFVSKIRAVI-NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSL 165 (272)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHH
Confidence 112223344556 6699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchH----HHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHH
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEEL----LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l----~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (725)
|++|+++|++++|+||+++||||+|+|++++ .+.+.+++++++..+|.+
T Consensus 166 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a--------------------------- 218 (272)
T 1hzd_A 166 AKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVA--------------------------- 218 (272)
T ss_dssp HHHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHH---------------------------
T ss_pred HHHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHH---------------------------
Confidence 9999999999999999999999999998875 456777777777766532
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
...+|++++.+...+++++++.|.+.+..++.|+|+++++++|++||+|.+
T Consensus 219 ---------~~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 269 (272)
T 1hzd_A 219 ---------MRVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRY 269 (272)
T ss_dssp ---------HHHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCC
T ss_pred ---------HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 235678888888889999999999999999999999999999999998874
No 71
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=5.5e-47 Score=407.91 Aligned_cols=290 Identities=23% Similarity=0.319 Sum_probs=224.7
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCCCc--
Q 004891 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD-- 78 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~-- 78 (725)
.+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~ 83 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI 83 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence 45688888 7899999999995 8999999999999999999999999999999998 89999999999864321111
Q ss_pred ccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHH
Q 004891 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (725)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 158 (725)
...+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|. +
T Consensus 84 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 84 APVFFREEYMLN-NAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 111112223455 66999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhc------------cCCC---------
Q 004891 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHR------------TDKL--------- 217 (725)
Q Consensus 159 a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~------------~~~~--------- 217 (725)
|++|++||++++|+||+++||||+|||++++.+.+..+++ +...++..+....+ ...+
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 240 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINS 240 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999998775544422 11111111100000 0000
Q ss_pred ----CChHHHHHHH-----HHHHHHHHHhCCCCh-hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Q 004891 218 ----GSLSEAREVL-----KLARLQAKKTAPNMP-QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (725)
Q Consensus 218 ----~~~~~~~~~~-----~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 287 (725)
.......+.+ ..+....++-..+.| +...+|++++.+...+++++++.|.+.+..++.|+|++|++++|+
T Consensus 241 ~f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 241 CFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HTTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 0000000011 111123344444555 567899999999999999999999999999999999999999999
Q ss_pred -hh-hhhcCCC
Q 004891 288 -AQ-RATSKVP 296 (725)
Q Consensus 288 -~~-r~~~~~~ 296 (725)
+| |+|++.+
T Consensus 321 ~eK~r~P~~~~ 331 (363)
T 3bpt_A 321 IDKDQSPKWKP 331 (363)
T ss_dssp TSCCCCCCCSS
T ss_pred eCCCCCCCCCC
Confidence 77 7776543
No 72
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=2.6e-47 Score=391.49 Aligned_cols=242 Identities=19% Similarity=0.299 Sum_probs=204.3
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 004891 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (725)
Q Consensus 5 ~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (725)
.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++ +++|+|||||.|++||+|+|++++....... .....
T Consensus 8 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 84 (254)
T 3isa_A 8 PLAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGD-LLLRM 84 (254)
T ss_dssp SEEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHH-HHHHH
T ss_pred eEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchh-HHHHH
Confidence 388998 8999999999995 899999999999999999987 5899999999999999999999986432111 11111
Q ss_pred hhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHH
Q 004891 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (725)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~ 163 (725)
...+.++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++++|++++|..+|++|+
T Consensus 85 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ 160 (254)
T 3isa_A 85 VRIEMLL-QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSIL 160 (254)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHH
Confidence 2234555 679999999999999999999999999999999999999999999999998 479999999999999999
Q ss_pred HcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCChh
Q 004891 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (725)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (725)
++|++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 161 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 206 (254)
T 3isa_A 161 GSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRA---------------------------------- 206 (254)
T ss_dssp TTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
.+|+++. ++.++.|.+.+..++.|+|+++++.+|++||+|.+.+
T Consensus 207 --~~K~~l~-------~~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~~ 250 (254)
T 3isa_A 207 --TLHRVLR-------DDHDDADLAALARSAAQPGFKARIRDYLAQPAAEGHH 250 (254)
T ss_dssp --HHHHHHS-------CCCHHHHHHHHHHHHHSTTHHHHHHHHHHC-------
T ss_pred --HHHHHHh-------hhhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 3344442 1234668888999999999999999999999999766
No 73
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=2.9e-47 Score=388.59 Aligned_cols=239 Identities=23% Similarity=0.301 Sum_probs=213.8
Q ss_pred cEE-EEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 004891 5 RVT-MEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (725)
Q Consensus 5 ~i~-~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (725)
.+. ++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... . ..
T Consensus 3 ~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~-~~ 79 (243)
T 2q35_A 3 VVQLTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGE-V-EV 79 (243)
T ss_dssp SEEEEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTC-C-CC
T ss_pred eeEEEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchh-h-HH
Confidence 344 455 789999999999 589999999999999999999999999999999999999999999886432111 1 11
Q ss_pred chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHH
Q 004891 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (725)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (725)
.+++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|
T Consensus 80 ----~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 154 (243)
T 2q35_A 80 ----LDLS-GLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEM 154 (243)
T ss_dssp ----CCCH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHH
T ss_pred ----HHHH-HHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHH
Confidence 2344 56889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (725)
+++|++++|+||+++||||+|+|++++.+++.++++++++.++.+++
T Consensus 155 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 201 (243)
T 2q35_A 155 IYTGENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLV--------------------------------- 201 (243)
T ss_dssp HHHCCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875332
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Q 004891 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (725)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~ 287 (725)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 202 ---~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 202 ---ALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred ---HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 457777777777788999999999999999999999999875
No 74
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=1.1e-46 Score=392.75 Aligned_cols=244 Identities=18% Similarity=0.188 Sum_probs=204.8
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCc-
Q 004891 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (725)
|+|+.+.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~ 84 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN 84 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccccccc
Confidence 6677899999 789999999999 5899999999999999999999999999999999999999999998854211110
Q ss_pred --cc---ccc----hhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEee-CCceEeCcccccCCCCCchhhc
Q 004891 79 --VS---LMP----DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIPGFGGTQ 148 (725)
Q Consensus 79 --~~---~~~----~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~-~~a~~~~pe~~~Gl~p~~g~~~ 148 (725)
.. .+. .....++ ..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~ 163 (280)
T 1pjh_A 85 KYPSETSKWVSNFVARNVYVT-DAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTV 163 (280)
T ss_dssp CCSSHHHHHHHHTHHHHHHHH-HHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHH
Confidence 00 011 1123455 66899999999999999999999999999999999 9999999999999999999999
Q ss_pred hHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcc-----hHHHHHH-HHHHHHHhcCchhhhhhhccCCCCChHH
Q 004891 149 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSE 222 (725)
Q Consensus 149 ~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~-----~l~~~a~-~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (725)
+|++++|..+|++|++||++++|+||+++||||+|||++ ++.+++. ++++++++.||.+++
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~------------- 230 (280)
T 1pjh_A 164 SLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCL------------- 230 (280)
T ss_dssp HHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHH-------------
T ss_pred HHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHH-------------
Confidence 999999999999999999999999999999999999885 7888885 999999998875433
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcC
Q 004891 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (725)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~ 294 (725)
.+|++++.... ..++ ...++|+++++.+|+++|++..
T Consensus 231 -----------------------~~K~~l~~~~~----~~l~--------~~~~~d~~e~~~af~~kr~~e~ 267 (280)
T 1pjh_A 231 -----------------------GMKKLLKSNHI----DAFN--------KANSVEVNESLKYWVDGEPLKR 267 (280)
T ss_dssp -----------------------HHHHHHHTTTH----HHHH--------HHHHHHHHHHHHHHHHTHHHHH
T ss_pred -----------------------HHHHHHHHhHH----HHHH--------HhhhHHHHHHHHHHhCCccHHH
Confidence 44566665432 2222 1257899999999999998843
No 75
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=3.5e-47 Score=413.31 Aligned_cols=290 Identities=17% Similarity=0.243 Sum_probs=222.7
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCCcCCCCchhhhhccCC-----
Q 004891 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA----- 76 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~----- 76 (725)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 42 ~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~ 120 (407)
T 3ju1_A 42 QTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQV 120 (407)
T ss_dssp EEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSC
T ss_pred ceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhccccccccc
Confidence 3456666 7899999999995 7999999999999999999999999999999999 799999999998643110
Q ss_pred -CcccccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhC
Q 004891 77 -GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (725)
Q Consensus 77 -~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG 155 (725)
.....+......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 121 ~~~~~~~~~~~~~l~-~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g 199 (407)
T 3ju1_A 121 TEVAKVFFEEEYRLD-YLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG 199 (407)
T ss_dssp CHHHHHHHHHHHHHH-HHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH
Confidence 11112222233455 6699999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHH---H----------------HHHHHHHHHhcCc-----hhhhhh
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARRK-----PWIRSL 211 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~---~----------------a~~~a~~la~~~~-----~~~~~~ 211 (725)
.+|++|++||++++|+||+++||||+|||++++.+ + +.++++++..... ..+...
T Consensus 200 -~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~ 278 (407)
T 3ju1_A 200 -KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAES 278 (407)
T ss_dssp -THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHT
T ss_pred -HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHH
Confidence 99999999999999999999999999999999887 3 3334333322110 000000
Q ss_pred -hccCCC--CChHHHHHHH-------HHHHHHHHHhCCCCh-hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHH
Q 004891 212 -HRTDKL--GSLSEAREVL-------KLARLQAKKTAPNMP-QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSR 280 (725)
Q Consensus 212 -~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~ 280 (725)
...... .++....+.+ ..+....++-....| +...+|++++.+...+++++++.|.+.+..++.++|++
T Consensus 279 ~~~I~~~f~~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~ 358 (407)
T 3ju1_A 279 QEMIDRLMAGSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAKGDFC 358 (407)
T ss_dssp HHHHHHHTCSCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHSSHH
T ss_pred HHHHHHHhcCCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHH
Confidence 000000 1111110000 011111121112233 67889999999999999999999999999999999999
Q ss_pred HHHHHHH-hh-hhhcCCC
Q 004891 281 GLVHVFF-AQ-RATSKVP 296 (725)
Q Consensus 281 ~~i~aF~-~~-r~~~~~~ 296 (725)
|++++|+ +| |+|++.+
T Consensus 359 EGvrAflidKdr~P~w~~ 376 (407)
T 3ju1_A 359 EGVRALLIDKDKQPKWQF 376 (407)
T ss_dssp HHHHHHTTSCCCCCCCSS
T ss_pred HHHHHHHhcCCcCCCCCC
Confidence 9999998 77 7777655
No 76
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=3.7e-46 Score=377.96 Aligned_cols=230 Identities=23% Similarity=0.253 Sum_probs=202.1
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
|+ +.|.++. +++|++||||||+.|++|.+|+++|.++++++++| ++|+|||||.|++||+|+|++++..... ....
T Consensus 3 M~-~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~~-~~~~ 78 (233)
T 3r6h_A 3 MS-GPVTYTH-DDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGEA-KPAI 78 (233)
T ss_dssp ---CCEEEEE-ETTEEEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC---C-HHHH
T ss_pred CC-CceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccCh-HHHH
Confidence 55 5689999 78999999999989999999999999999999987 6999999999999999999999875321 1122
Q ss_pred ccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHH
Q 004891 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (725)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 160 (725)
.+....++++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|++++|..+|+
T Consensus 79 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~ 157 (233)
T 3r6h_A 79 DMLRGGFELS-YRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQ 157 (233)
T ss_dssp HHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHH
Confidence 2333445666 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCC
Q 004891 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (725)
Q Consensus 161 ~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (725)
+|+++|++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 206 (233)
T 3r6h_A 158 QAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHN------------------------------- 206 (233)
T ss_dssp HHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998875433
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 004891 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 271 (725)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~ 271 (725)
.+|++++.....+++++++.|.+.|.
T Consensus 207 -----~~K~~l~~~~~~~l~~~l~~e~~~f~ 232 (233)
T 3r6h_A 207 -----ATKLRARAEALKAIRAGIDGIEAEFG 232 (233)
T ss_dssp -----HHHHHTTHHHHHHHHHHHHTSHHHHC
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 56778888888888999998888763
No 77
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=5.4e-46 Score=382.48 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=205.2
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccc
Q 004891 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (725)
Q Consensus 3 ~~~i~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (725)
++.|.++. ++ +|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 22 ~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 22 YENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp CTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 56788998 67 99999999994 89999999999999999999999999999999999999999999886421111111
Q ss_pred ccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeC-cccccCCCCCchhhchHhhhhCHHHH
Q 004891 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKA 159 (725)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~-pe~~~Gl~p~~g~~~~l~r~vG~~~a 159 (725)
.+.....+++ ..|.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|..+|
T Consensus 101 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A 178 (263)
T 2j5g_A 101 KTYWEGKKVL-QNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRG 178 (263)
T ss_dssp HHHHHHHHHH-HHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence 1222234556 6689999999999999999 5999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCC
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (725)
++|+++|++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 179 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 228 (263)
T 2j5g_A 179 RYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLR------------------------------ 228 (263)
T ss_dssp HHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhh
Q 004891 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (725)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r 290 (725)
.+|++++.....+++++++.| ...|++++|++||
T Consensus 229 ------~~K~~l~~~~~~~l~~~l~~e-----------~~~eg~~af~~~~ 262 (263)
T 2j5g_A 229 ------YTRVALTQRLKRLVNEGIGYG-----------LALEGITATDLRN 262 (263)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHTTC
T ss_pred ------HHHHHHHhhhhccHHHHHHHH-----------HHHhhHHHHHhcc
Confidence 456777766665666666554 4569999999987
No 78
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=1e-45 Score=374.42 Aligned_cols=225 Identities=21% Similarity=0.288 Sum_probs=200.4
Q ss_pred CcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 004891 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (725)
+.|.++. +++|++||||||+.|++|.+|+++|.+++++++.| +|+|||||.|++||+|+|++++... ......+.
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~--~~~~~~~~ 80 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSS--AEAAINLV 80 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHC--HHHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhC--hHHHHHHH
Confidence 4588888 79999999999989999999999999999999976 4899999999999999999998752 11122233
Q ss_pred hhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHHHHHHH
Q 004891 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (725)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l 162 (725)
...+.++ ++|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++++++++++++|..+|++|
T Consensus 81 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l 159 (232)
T 3ot6_A 81 AQGSTLA-RRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRS 159 (232)
T ss_dssp HHHHHHH-HHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHH
Confidence 3445666 6799999999999999999999999999999999998 8999999999999988999999999999999999
Q ss_pred HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCCh
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (725)
++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 160 ~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 206 (232)
T 3ot6_A 160 VINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHK--------------------------------- 206 (232)
T ss_dssp HTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 004891 243 QHQACLDVIEEGIVHGGYSGVLKEAKVF 270 (725)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~ 270 (725)
.+|++++.....+++++++.|.+.|
T Consensus 207 ---~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 207 ---KTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 5678888888888999999998764
No 79
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=1.6e-44 Score=379.92 Aligned_cols=256 Identities=18% Similarity=0.195 Sum_probs=215.4
Q ss_pred CCcEEEEEe-cCcEEEEEeCCC-C----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEcCCCCCcCCCCchhhh
Q 004891 3 APRVTMEVG-NDGVAIITLINP-P----VNALAIPIVAGLKDKFEEATS-----RDDVKAIVLTGNGGRFSGGFDINVFQ 71 (725)
Q Consensus 3 ~~~i~~~~~-~~~v~~i~l~~p-~----~Nal~~~~~~~l~~~l~~~~~-----~~~v~~vVl~g~g~~F~aG~Dl~~~~ 71 (725)
|+++.+..+ +++|++|||||| + +|+||.+|+.+|.+++++++. |+++|+|||||.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 456666543 789999999998 3 559999999999999999987 58999999999999999999999986
Q ss_pred hccCCCc---ccccchhHHHHHHHHH---hhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCch
Q 004891 72 KVHGAGD---VSLMPDVSVELVVNLI---EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFG 145 (725)
Q Consensus 72 ~~~~~~~---~~~~~~~~~~~~~~~l---~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g 145 (725)
....... ...+.......+ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 187 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGV-HAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMG 187 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-HHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSS
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCcc
Confidence 5321111 111111122223 223 468999999999999999999999999999999999999999999999999
Q ss_pred hhchHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHH
Q 004891 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 225 (725)
Q Consensus 146 ~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~ 225 (725)
++++|+|++|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++ +|.
T Consensus 188 ~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~------------------- 247 (305)
T 3m6n_A 188 AYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPH------------------- 247 (305)
T ss_dssp HHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHH-------------------
T ss_pred HHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChH-------------------
Confidence 999999999999999999999999999999999999999999999999999999986 543
Q ss_pred HHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhhcCCC
Q 004891 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (725)
Q Consensus 226 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~~~~~ 296 (725)
+...+|++++.....+++++++.|.+.+..++.|+|....+..++-+++.++.+
T Consensus 248 -----------------a~~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~~~ 301 (305)
T 3m6n_A 248 -----------------AWAAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRRSG 301 (305)
T ss_dssp -----------------HHHHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC----
T ss_pred -----------------HHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhccc
Confidence 233678899999999999999999999999999999988888777766655443
No 80
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=4.4e-44 Score=381.16 Aligned_cols=204 Identities=25% Similarity=0.334 Sum_probs=173.8
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (725)
|+|++|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|++||+|||||.|++||+|+|++++.........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~ 110 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC-------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccc
Confidence 3577899999 8999999999995 8999999999999999999999999999999999999999999998653211100
Q ss_pred -----------------------------cccchhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCce
Q 004891 80 -----------------------------SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130 (725)
Q Consensus 80 -----------------------------~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~ 130 (725)
..+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~ 189 (333)
T 3njd_A 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGF-ASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK 189 (333)
T ss_dssp --CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHH-THHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence 00112223444 568899999999999999999999999999999999999
Q ss_pred EeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhh
Q 004891 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (725)
Q Consensus 131 ~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (725)
|++||+++|++|++| +|++++|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 190 f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~ 265 (333)
T 3njd_A 190 IGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLI 265 (333)
T ss_dssp EECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred eechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999876 5899999999999999999999999999999999999999999999999999999876443
No 81
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=2.7e-44 Score=369.19 Aligned_cols=237 Identities=18% Similarity=0.236 Sum_probs=201.7
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCccccc
Q 004891 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (725)
+.|.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .......+
T Consensus 16 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~ 93 (257)
T 1szo_A 16 ENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG-TPHDWDEI 93 (257)
T ss_dssp TTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCS-SHHHHHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcC-CHHHHHHH
Confidence 5689998 789999999999 58999999999999999999999999999999999999999999987531 11111112
Q ss_pred chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeC-cccccCCCCCchhhchHhhhhCHHHHHH
Q 004891 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (725)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~-pe~~~Gl~p~~g~~~~l~r~vG~~~a~~ 161 (725)
.....+++ ..|.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|++++|..+|++
T Consensus 94 ~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ 171 (257)
T 1szo_A 94 IFEGQRLL-NNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 171 (257)
T ss_dssp HHHHHHHH-HHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHH
Confidence 22234556 6689999999999999999 5999999999999999999999 9999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCCChHHHHHHHHHHHHHHHHhCCCC
Q 004891 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (725)
Q Consensus 162 l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (725)
|+++|++++|+||+++||||+|||++++.+++.++|+++++.||.+++
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 219 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARR-------------------------------- 219 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHhHHHHHHHHHhhhh
Q 004891 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (725)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~ 291 (725)
.+|++++.....+++++++.|.. .+++++|-.+.+
T Consensus 220 ----~~K~~l~~~~~~~l~~~l~~~~~-----------~eg~~a~~~~~~ 254 (257)
T 1szo_A 220 ----YARKVLTRQLRRVMEADLSLGLA-----------HEALAAIDLGME 254 (257)
T ss_dssp ----HHHHHHSHHHHHHHHHHHHHHHH-----------HHHHHHHHHC--
T ss_pred ----HHHHHHHhhhhccHHHHHHHHHH-----------Hhhhhhhhcccc
Confidence 45667776666666776666543 367888876544
No 82
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=3.4e-44 Score=388.77 Aligned_cols=246 Identities=23% Similarity=0.211 Sum_probs=201.4
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC--------C-CCCcCCCCchhhhhc
Q 004891 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN--------G-GRFSGGFDINVFQKV 73 (725)
Q Consensus 4 ~~i~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~--------g-~~F~aG~Dl~~~~~~ 73 (725)
+.|.++. +++|++|||||| +.|+||.+|+++|.++++.++.|++||+|||||. | ++||+|+|++++...
T Consensus 167 ~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 167 EAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp SSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred ceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 4688888 789999999999 5899999999999999999999999999999994 6 799999999998643
Q ss_pred cCCCccc---ccchhHHHHHHHHH------------hhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCccccc
Q 004891 74 HGAGDVS---LMPDVSVELVVNLI------------EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138 (725)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~~~l------------~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~ 138 (725)
....... ........++ +.+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~l 324 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLV-RGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKE 324 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHH-HCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTT
T ss_pred CcchhhhhhHHHHHHHHHHH-HHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhcc
Confidence 2111000 0001123333 333 47999999999999999999999999999999999999999999
Q ss_pred CCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhhhhhccCCCC
Q 004891 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG 218 (725)
Q Consensus 139 Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~ 218 (725)
|++|++| +++|++++|..+|++|++||++|+|+||+++||||+|||++++.+++.+++++++. .
T Consensus 325 Gl~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~---~------------ 388 (440)
T 2np9_A 325 GIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---D------------ 388 (440)
T ss_dssp CCCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---H------------
T ss_pred CcCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---H------------
Confidence 9999887 68999999999999999999999999999999999999999999999988877642 1
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHH---HHHHHHHHHHHHHhCCHhHHHHHHHHHhhhhh
Q 004891 219 SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGY---SGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (725)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~---~~l~~E~~~~~~~~~s~~~~~~i~aF~~~r~~ 292 (725)
++..+|++++.... +.+ +.++.|...+..++.|+|++|++.+|++||++
T Consensus 389 ------------------------Av~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~a 440 (440)
T 2np9_A 389 ------------------------AVLANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPPA 440 (440)
T ss_dssp ------------------------HHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC-----
T ss_pred ------------------------HHHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCCC
Confidence 22345666666544 433 56677788889999999999999999999863
No 83
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=1.8e-43 Score=367.82 Aligned_cols=204 Identities=27% Similarity=0.340 Sum_probs=173.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcc
Q 004891 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (725)
Q Consensus 1 M~~~~i~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (725)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~ 95 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTL 95 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCH
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccch
Confidence 4567899999 7899999999995 8999999999999999999999999999999999999999999998653221111
Q ss_pred -ccc---chhHHHHHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhC
Q 004891 80 -SLM---PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (725)
Q Consensus 80 -~~~---~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG 155 (725)
..+ ......++ ++|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+++++.+ ++++|
T Consensus 96 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~~-~~~vG 172 (279)
T 3t3w_A 96 EFIYAHESRRYLEYS-LRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHGH-TWELG 172 (279)
T ss_dssp HHHHHHHHHHTHHHH-HHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCCH-HHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHHH-HhhcC
Confidence 011 11223445 6689999999999999999999999999999999999999999999999 55555544 99999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhh
Q 004891 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI 208 (725)
Q Consensus 156 ~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~ 208 (725)
..+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.++
T Consensus 173 ~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~ 225 (279)
T 3t3w_A 173 PRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFAL 225 (279)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHH
Confidence 99999999999999999999999999999999999999999999999887543
No 84
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=1.9e-42 Score=366.03 Aligned_cols=245 Identities=22% Similarity=0.354 Sum_probs=221.2
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHH-HHHHhhcCcccccCc-c
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-S 383 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~ 383 (725)
+.++||+|||+|+||++||..|+++|++|++||++++.++++.+.+++.++.+++.|.++.. .....++++++++++ +
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 35789999999999999999999999999999999999999999999999988888754310 113355678888888 5
Q ss_pred cccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCC
Q 004891 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~ 463 (725)
++++||+||+||||+.++|+++|+++.+.+++++||+|+||+++++++++.+.++.+++|+|||+|++.++++|+++++.
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~ 163 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPE 163 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTT
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCC
Confidence 78999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEE-cCCcchhhhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHh
Q 004891 464 TSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDL 537 (725)
Q Consensus 464 t~~e~~~~~~~l~~~lGk~~v~v-~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv-~~~dID~~~-~~~G~p---~Gpf~~~D~ 537 (725)
|++++++.++++++.+|++|+++ ++.|||++||++.++++||++++++|+ ++++||.++ .++|+| +|||+++|+
T Consensus 164 t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl 243 (319)
T 2dpo_A 164 TSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHL 243 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHh
Confidence 99999999999999999999999 689999999999999999999999986 999999999 789987 899999999
Q ss_pred hchHHHHHHHHHHH
Q 004891 538 AGYGVAAATSKEFD 551 (725)
Q Consensus 538 ~Gld~~~~~~~~l~ 551 (725)
.| +.+.+.++++.
T Consensus 244 ~g-~g~~~~~~~~~ 256 (319)
T 2dpo_A 244 NA-EGMLSYSDRYS 256 (319)
T ss_dssp TT-TSHHHHHHHHH
T ss_pred cC-chHHHHHHHHh
Confidence 98 66666666553
No 85
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=1.6e-39 Score=353.76 Aligned_cols=204 Identities=24% Similarity=0.330 Sum_probs=183.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-----------CCCCCHHHHHHHHHHHHHHhcC-CCceEEEEEc-CCCCCcCCCCchh
Q 004891 3 APRVTMEVGNDGVAIITLINPP-----------VNALAIPIVAGLKDKFEEATSR-DDVKAIVLTG-NGGRFSGGFDINV 69 (725)
Q Consensus 3 ~~~i~~~~~~~~v~~i~l~~p~-----------~Nal~~~~~~~l~~~l~~~~~~-~~v~~vVl~g-~g~~F~aG~Dl~~ 69 (725)
+.+|.++. +++|++||||||+ .|+||.+|+.+|.+++++++.| +++|+||||| .|++||+|+|+++
T Consensus 20 ~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~e 98 (556)
T 2w3p_A 20 YKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFM 98 (556)
T ss_dssp CSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHH
T ss_pred CceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHH
Confidence 45688888 7899999999995 6999999999999999999999 9999999999 8999999999999
Q ss_pred hhhccCCCcccccchhHHHHHHHHH----hhCCCcEEEEEcccccchhhHHhhhcCEEEeeCC--ceEeCcccc-cCCCC
Q 004891 70 FQKVHGAGDVSLMPDVSVELVVNLI----EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK--TQLGLPELT-LGVIP 142 (725)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~--a~~~~pe~~-~Gl~p 142 (725)
+..... .....+....++++ +.| .++||||||+|||+|+|||++|+++||+|||+++ ++|++||++ +|++|
T Consensus 99 l~~~~~-~~~~~~~~~~~~l~-~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~P 176 (556)
T 2w3p_A 99 LGLSTH-AWKVNFCKFTNETR-NGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLP 176 (556)
T ss_dssp HHHSCH-HHHHHHHHHHHHHH-HHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCC
T ss_pred Hhhccc-HHHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCC
Confidence 865321 11111223344555 567 8999999999999999999999999999999999 999999999 99999
Q ss_pred CchhhchHh--hhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchhhh
Q 004891 143 GFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (725)
Q Consensus 143 ~~g~~~~l~--r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (725)
++|++++|+ |++|..+|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 177 g~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~ 245 (556)
T 2w3p_A 177 GTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAH 245 (556)
T ss_dssp TTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTT
T ss_pred CccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHh
Confidence 999999999 9999999999999999999999999999999999999999999999999999887654
No 86
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.88 E-value=2.6e-22 Score=223.36 Aligned_cols=149 Identities=11% Similarity=0.074 Sum_probs=135.8
Q ss_pred cCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHH
Q 004891 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 501 (725)
Q Consensus 422 ~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~ 501 (725)
.+++.+.++. ...++.++++.|+++ ++++|+++++.|++++++.+..+++.+|+.|+.++|.||||+||++.++
T Consensus 324 ~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 5667777666 345678999999988 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHhhCCCC-CCCcHHHHHHHHcCCCccc
Q 004891 502 SQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR-SFQSPLVDLLLKSGRNGKA 576 (725)
Q Consensus 502 ~~Ea~~l~~~Gv-~~~dID~~~-~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~~~~-~~~~~~l~~~v~~g~~G~k 576 (725)
+|||++|+++|+ +++|||.++ .|+|||+|||+|+|.+|+|+++++++.+++.+++. +.|+++|++|+++|++|..
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~ 475 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYES 475 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC--
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCC
Confidence 999999999998 999999999 99999999999999999999999999999999874 4499999999999976543
No 87
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.87 E-value=1.8e-23 Score=185.44 Aligned_cols=103 Identities=20% Similarity=0.153 Sum_probs=85.4
Q ss_pred HcCCeeE-EEcCCcchhhhhhhHHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHhhC
Q 004891 478 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (725)
Q Consensus 478 ~lGk~~v-~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv-~~~dID~~~-~~~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (725)
.++|.+| +++|.||||+||++.+++|||++++++|+ +++|||.++ .++|||+|||+++|.+|+|+++++++.+++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4689999 88999999999999999999999999997 999999999 89999999999999999999999999999988
Q ss_pred CC-CCCCcHHHHHHHHcCCCccccCce
Q 004891 555 PD-RSFQSPLVDLLLKSGRNGKANGKG 580 (725)
Q Consensus 555 ~~-~~~~~~~l~~~v~~g~~G~k~g~G 580 (725)
++ ++.|++++++|+++|++|+|||+|
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCCCCHHHHHHHHcCCCCccCCCC
Confidence 87 445899999999999999999998
No 88
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.81 E-value=1.1e-20 Score=215.56 Aligned_cols=169 Identities=20% Similarity=0.207 Sum_probs=143.8
Q ss_pred cCcEEEEEeCCC-CCCC--CCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHH
Q 004891 12 NDGVAIITLINP-PVNA--LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVE 88 (725)
Q Consensus 12 ~~~v~~i~l~~p-~~Na--l~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 88 (725)
+++|++|++++| ..|+ ++..+.++|.++|++++.|+++|+|||++.+ .|+|+.... ...+
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~-------------~i~~ 362 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE-------------VIRA 362 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH-------------HHHH
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH-------------HHHH
Confidence 578999999999 4677 6889999999999999999999999999874 477776431 1234
Q ss_pred HHHHHHhhCCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCccc------------ccCCCCCc------------
Q 004891 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL------------TLGVIPGF------------ 144 (725)
Q Consensus 89 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~------------~~Gl~p~~------------ 144 (725)
.+ +++..++|||||+|+|.|.|||+.|+++||+|+|++++.|+.+++ ++|+.|..
T Consensus 363 ~i-~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~ 441 (593)
T 3bf0_A 363 EL-AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 (593)
T ss_dssp HH-HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTT
T ss_pred HH-HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcC
Confidence 45 558889999999999999999999999999999999999999985 68987632
Q ss_pred -hhh---------------chHhhhhCHHH-----HHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHH
Q 004891 145 -GGT---------------QRLPRLVGLSK-----AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198 (725)
Q Consensus 145 -g~~---------------~~l~r~vG~~~-----a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~ 198 (725)
+.+ .++.+.++..+ +.+++++|+.++|+||+++||||+|++.+++.+.+.+++.
T Consensus 442 ~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a~ 516 (593)
T 3bf0_A 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAK 516 (593)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHcC
Confidence 233 56788899888 9999999999999999999999999998888887777543
No 89
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.79 E-value=8e-19 Score=177.90 Aligned_cols=168 Identities=18% Similarity=0.179 Sum_probs=130.1
Q ss_pred cCcEEEEEeCCC-CCCC-----CC--HHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccc
Q 004891 12 NDGVAIITLINP-PVNA-----LA--IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (725)
Q Consensus 12 ~~~v~~i~l~~p-~~Na-----l~--~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (725)
+++|++|+++.+ ..+. ++ .-.+++|.++|+++++|+++|+|||++. |.|+|+....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------ 65 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------ 65 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence 578999999877 2221 11 0136899999999999999999999986 6788886532
Q ss_pred hhHHHHHHHHHhh-CCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCc---------------------ccccCCC
Q 004891 84 DVSVELVVNLIED-CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP---------------------ELTLGVI 141 (725)
Q Consensus 84 ~~~~~~~~~~l~~-~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~p---------------------e~~~Gl~ 141 (725)
...+.+ +.+.. ++|||||+|+|.|.|||++|+++||+|+|++++.|+.+ +++.|..
T Consensus 66 -~i~~~l-~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~ 143 (240)
T 3rst_A 66 -EIHKKL-EEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAH 143 (240)
T ss_dssp -HHHHHH-HHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTT
T ss_pred -HHHHHH-HHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecccc
Confidence 123445 44666 89999999999999999999999999999999999999 6677777
Q ss_pred CCchhh--------------------------chHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecCcchHHHHHHH
Q 004891 142 PGFGGT--------------------------QRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL 195 (725)
Q Consensus 142 p~~g~~--------------------------~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~ 195 (725)
+..+.. ..-.|.++.....+ +++|+.+++++|+++||||++.+.+++.+.+.+
T Consensus 144 k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~ 222 (240)
T 3rst_A 144 ADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK 222 (240)
T ss_dssp TTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 765522 22344556555554 789999999999999999999988887777666
Q ss_pred HHH
Q 004891 196 WAL 198 (725)
Q Consensus 196 ~a~ 198 (725)
++.
T Consensus 223 ~~~ 225 (240)
T 3rst_A 223 DHK 225 (240)
T ss_dssp HCG
T ss_pred HhC
Confidence 543
No 90
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.77 E-value=4.5e-18 Score=176.98 Aligned_cols=189 Identities=15% Similarity=0.086 Sum_probs=145.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC---cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-c
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~---~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (725)
.+||+|||+|.||.+||..|+++|+ +|++||++++++++..+. . .+..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------~-------------gi~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------C-------------GVHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------T-------------CCEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------c-------------CCEEeCChHH
Confidence 4689999999999999999999999 999999999987765321 0 13334444 6
Q ss_pred cccCCCEEEEeccCChHHHHHHHHHHHHh-CCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeE-ecC
Q 004891 384 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI-VRT 461 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lvei-i~~ 461 (725)
.+++||+||+||| ++...++++++.+. ++++++|+|++++++++.+...+..+.+++++||+.|...+..+++ +++
T Consensus 60 ~~~~aDvVilav~--p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVK--PHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSC--GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeC--HHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 7899999999998 67888999999998 8899899999999999999988887789999999999999887774 568
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCc--chh-----hhhhhHHHHHHHHH--HHHcCCCHHHHHHHH
Q 004891 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCT--GFA-----VNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (725)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~~--Gfi-----~nRl~~a~~~Ea~~--l~~~Gv~~~dID~~~ 522 (725)
+.++++.++.++++++.+|+.+++..+.. .+. ..-+++ ++.|++. .++.|+++++.-.++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v~~E~~~d~~talsgsgpa~~~-~~~eal~~a~v~~Gl~~~~a~~l~ 206 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIF-LIMEALQEAAEQLGLTKETAELLT 206 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEECSSHHHHHHHHHHTTSHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEECCHHHhhHHHHHhccHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88999999999999999998544323210 000 012222 2223332 346788888876665
No 91
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.76 E-value=3.1e-19 Score=189.39 Aligned_cols=203 Identities=17% Similarity=0.207 Sum_probs=158.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+||+|||+|.||.++|..|+++|+ +|++||++++.++.....+..... ......++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV------------MFGSTSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh------------hcCCCcEEEECCCHHHhCC
Confidence 589999999999999999999999 999999999887753211211100 0111235666677788999
Q ss_pred CCEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhcccCC-CCcEEEEecCCCC
Q 004891 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 450 (725)
Q Consensus 388 aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~~-~~r~ig~h~~~p~ 450 (725)
||+||+|+ +++..+++++++++.++++ ++++ +||++.+....+.+.... ++|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7888999999999999975 7766 567666665666666554 6788764
Q ss_pred CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhh---hhHHHHHHH-------HHHHHcCC-CHHHHH
Q 004891 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 519 (725)
Q Consensus 451 ~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nR---l~~a~~~Ea-------~~l~~~Gv-~~~dID 519 (725)
.|+.++......+.+.+|+. .++.+||++|| .++++++++ ..++++|+ +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~---~~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVN---ASDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSC---GGGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcC---hhhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 36788888888999999987 47999999999 888899988 88889985 999999
Q ss_pred HHHHhcCCCccHHHHHHhhch-HHHHHHH
Q 004891 520 SAIRSFGLPIGPFQLLDLAGY-GVAAATS 547 (725)
Q Consensus 520 ~~~~~~G~p~Gpf~~~D~~Gl-d~~~~~~ 547 (725)
.++... ++|||+++|..|. ++.+.+.
T Consensus 211 ~~~~~~--~~~~~ei~~~~g~g~~~~~~a 237 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADNLKTGTAYFAPA 237 (317)
T ss_dssp HHHHHH--HHHHHHHHHHHSSSCCCHHHH
T ss_pred HHHHHH--HhhHHHHHHhhcCCchHHHHH
Confidence 998432 7899999998887 5554433
No 92
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.76 E-value=4.1e-18 Score=169.75 Aligned_cols=148 Identities=23% Similarity=0.302 Sum_probs=125.6
Q ss_pred cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHH
Q 004891 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91 (725)
Q Consensus 12 ~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 91 (725)
.+.|++|++++ ++++.+.+.|.++|+.++++ ++++|||+.. |.|+|+... ..++
T Consensus 7 ~~~V~vI~i~g----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~----------------~~i~- 60 (230)
T 3viv_A 7 KNIVYVAQIKG----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM----------------MNIV- 60 (230)
T ss_dssp CCEEEEEEEES----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH----------------HHHH-
T ss_pred CCeEEEEEEeC----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH----------------HHHH-
Confidence 46799999985 69999999999999999864 6999999875 677776433 2455
Q ss_pred HHHhhCCCcEEEEE---cccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhc---------------hHhhh
Q 004891 92 NLIEDCKKPIVAAV---EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQ---------------RLPRL 153 (725)
Q Consensus 92 ~~l~~~~kp~Iaav---~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~---------------~l~r~ 153 (725)
+.|..++||||++| +|.|.|+|+.|+++||+++|+++++|+.+++..+. |..|.+. .+++.
T Consensus 61 ~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~ 139 (230)
T 3viv_A 61 QRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQE 139 (230)
T ss_dssp HHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 66889999999999 99999999999999999999999999999987533 5445421 46777
Q ss_pred hCH--HHHHHHHHcCCCCCHHHHHHcCCcceecCc
Q 004891 154 VGL--SKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186 (725)
Q Consensus 154 vG~--~~a~~l~l~g~~~~a~eA~~~Glv~~vv~~ 186 (725)
.|. ..+.+++.++..++|+||+++||||+|++.
T Consensus 140 ~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 140 SGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp TTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred hCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 885 789999999999999999999999999964
No 93
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.72 E-value=2.9e-17 Score=169.82 Aligned_cols=211 Identities=10% Similarity=0.026 Sum_probs=154.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCc-EEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~-V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
+||+|||+|.||..+|..|++.|++ |++||+++++++...+.+ .+..++++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-----------------------EAEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-----------------------TCEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-----------------------CCceeCCHHHHhc
Confidence 5899999999999999999999999 999999998876643210 12334555 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCC-----CCCCeeeEecC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 461 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~-----~~~~lveii~~ 461 (725)
+||+||+|+|++ ...+++.++.+.++++++|++++++.+.+.+.+.+.. .-..|++.|. ..++.+.++.
T Consensus 68 ~~Dvvi~av~~~--~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDS--AFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPH---YGVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHH--HHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSS---EEEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHH--HHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHh---ccCcCCceecCCCchhhcCCCeEEE-
Confidence 999999999955 3478888998888899999999999888776554433 2236776652 1223333332
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--cch-----hhhhhh--HHHHHHHHHHHHcCCCHHHHHHHH-Hh------c
Q 004891 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-RS------F 525 (725)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~--~Gf-----i~nRl~--~a~~~Ea~~l~~~Gv~~~dID~~~-~~------~ 525 (725)
..++++.++.++++++.+|+.++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .. .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 2357999999999999999999999754 356 677765 334456532 46699888875544 21 2
Q ss_pred ---CCCccHHHHHHhhchHHHHHHHHH
Q 004891 526 ---GLPIGPFQLLDLAGYGVAAATSKE 549 (725)
Q Consensus 526 ---G~p~Gpf~~~D~~Gld~~~~~~~~ 549 (725)
+.++||+...|..|++.....++.
T Consensus 221 ~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred ChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 346799999999999988877654
No 94
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.71 E-value=9.1e-18 Score=148.65 Aligned_cols=84 Identities=27% Similarity=0.445 Sum_probs=78.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCC-CCCCC
Q 004891 620 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPS 698 (725)
Q Consensus 620 ~~~~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~ 698 (725)
+...|.||++.+++|||++++++||+ |++|||.+|++|+|||+ |||+++|.+|++.++++++.+.+.+++ +|.|+
T Consensus 15 ~~gfi~nRll~~~~~eA~~ll~eGva-~~~dID~a~~~g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~ 90 (110)
T 3ctv_A 15 TDKINPMDFTFVEINEAVKLVEMGVA-TPQDIDTAIKLGLNRPF---GPFELAKQFGAEQIAKRLEELAKQFGKKIFEPA 90 (110)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHTTCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHcCCCCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 34579999999999999999999999 99999999999999999 999999999999999999999999988 89999
Q ss_pred HHHHHHHHc
Q 004891 699 RFLEERATK 707 (725)
Q Consensus 699 ~~l~~~~~~ 707 (725)
++|++|+++
T Consensus 91 ~~L~~~v~~ 99 (110)
T 3ctv_A 91 KTLKEGKLE 99 (110)
T ss_dssp HHHHTTTHH
T ss_pred HHHHHHHHc
Confidence 999999843
No 95
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.71 E-value=8.6e-17 Score=164.40 Aligned_cols=188 Identities=16% Similarity=0.180 Sum_probs=143.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC----cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-c
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~----~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (725)
+||+|||+|.||.++|..|+++|+ +|++||++++++++..+.+ .+..+++. +
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-----------------------GLTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-----------------------CCEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-----------------------CCEEeCChHH
Confidence 689999999999999999999998 9999999999877653211 12334444 5
Q ss_pred cccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCC-eeeEecCC
Q 004891 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTE 462 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~-lveii~~~ 462 (725)
.+++||+||+|+| .....++++++.+.++++++|+|.++++++..+...+....++++.||+.|..... ...+++++
T Consensus 60 ~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 6788999999997 66778888999988999999999999999988888777677899999999998887 56777888
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCc-----chhhh-hhhHHHHHHHHH--HHHcCCCHHHHHHHH
Q 004891 463 RTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAVN-RAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (725)
Q Consensus 463 ~t~~e~~~~~~~l~~~lGk~~v~v~d~~-----Gfi~n-Rl~~a~~~Ea~~--l~~~Gv~~~dID~~~ 522 (725)
.++++.++.++++++.+|+ ++++.+.. +.... -.+..++.|++. ....|+++++..+++
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8999999999999999998 55554321 11110 111223345543 346699999988887
No 96
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.71 E-value=1.6e-17 Score=174.02 Aligned_cols=188 Identities=16% Similarity=0.173 Sum_probs=134.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.|+||+|||+|.||.+||.+|+++||+|++|||++++++... +.| .+...++ +.+
T Consensus 2 ~M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~-----------~~G-------------a~~a~s~~e~~ 57 (300)
T 3obb_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-----------AAG-------------ASAARSARDAV 57 (300)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEECSSHHHHH
T ss_pred CcCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-----------HcC-------------CEEcCCHHHHH
Confidence 368999999999999999999999999999999999877643 222 2334455 667
Q ss_pred cCCCEEEEeccCChHHHHHHHHH--HHHhCCCCeEEEecCCCCChH---HHhcccCCCCcEEEEecCCCCCCC-------
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSE--LEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVM------- 453 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~--l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~~~r~ig~h~~~p~~~~------- 453 (725)
++||+||.|+|++.++...++.. +.+.++++++|+.. ||..+. ++++.+... |++|.+.|..+
T Consensus 58 ~~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId~-sT~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~ 132 (300)
T 3obb_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLEC-STIAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAA 132 (300)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEEC-SCCCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHH
T ss_pred hcCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEEC-CCCCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHh
Confidence 89999999999877776665542 67778889988754 444443 333433322 56776655333
Q ss_pred -CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-cc---hhhhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH-
Q 004891 454 -PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG---FAVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI- 522 (725)
Q Consensus 454 -~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~G---fi~nRl~~----a~~~Ea~~l~~~-Gv~~~dID~~~- 522 (725)
.+.-++.| +++++++++++++.+|+.++++++. .| .++|.++. ..+.|++.+.+. |++++.+-.++
T Consensus 133 G~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~ 209 (300)
T 3obb_A 133 GTLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMR 209 (300)
T ss_dssp TCEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred CCEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 23334455 5999999999999999999999863 22 23454432 334589888876 89999998888
Q ss_pred HhcC
Q 004891 523 RSFG 526 (725)
Q Consensus 523 ~~~G 526 (725)
.+.+
T Consensus 210 ~~~~ 213 (300)
T 3obb_A 210 RSSG 213 (300)
T ss_dssp TSTT
T ss_pred hCcc
Confidence 5443
No 97
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.69 E-value=3.8e-16 Score=164.93 Aligned_cols=164 Identities=15% Similarity=0.167 Sum_probs=127.4
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
..++||+|||+|.||.++|..|.++|+ +|++||++++.++.+. +.|.++ ..++++
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-----------~~G~~~-----------~~~~~~~ 88 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGIID-----------EGTTSIA 88 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSCS-----------EEESCTT
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-----------HCCCcc-----------hhcCCHH
Confidence 346899999999999999999999999 9999999998876643 223211 234455
Q ss_pred c-cccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCCCCcEEEEecCCCCC--------
Q 004891 383 S-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-------- 451 (725)
Q Consensus 383 ~-~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~r~ig~h~~~p~~-------- 451 (725)
+ .+++||+||+||| .....++++++.+.++++++|++.+|+.. +..+.+.+. .+|++.||+.++.
T Consensus 89 ~~~~~~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~ 164 (314)
T 3ggo_A 89 KVEDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSL 164 (314)
T ss_dssp GGGGGCCSEEEECSC--GGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCC
T ss_pred HHhhccCCEEEEeCC--HHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhh
Confidence 4 6899999999999 44567889999999999999988776643 344544443 2899999987653
Q ss_pred ----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-Ccchhhh
Q 004891 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAVN 495 (725)
Q Consensus 452 ----~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~~Gfi~n 495 (725)
.++.+.+++++.++++.++.++++++.+|+.++++++ ....++.
T Consensus 165 ~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a 213 (314)
T 3ggo_A 165 DNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFG 213 (314)
T ss_dssp TTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHH
T ss_pred hhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHH
Confidence 3467888888889999999999999999999998853 3333443
No 98
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.69 E-value=1.1e-16 Score=168.77 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=135.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
+|+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..+++. +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------AG-------------ASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------TT-------------CEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CC-------------CeEcCCHHHHH
Confidence 3679999999999999999999999999999999998776432 12 3344555 567
Q ss_pred cCCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCCC----CCCee
Q 004891 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH----VMPLL 456 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~~----~~~lv 456 (725)
++||+||+|+|++..++..+.. ++.+.++++++|++.+++.+.. .+.+.+. ...+|+. +|+.+.. ...++
T Consensus 58 ~~aDvvi~~vp~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~-~pv~~~~~~~~~g~l~ 136 (302)
T 2h78_A 58 QGADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAGAAAGTLT 136 (302)
T ss_dssp TTCSEEEECCSCHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE-CCEESCHHHHHHTCEE
T ss_pred hCCCeEEEECCCHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE-EEccCChhhHhcCCce
Confidence 8999999999977666554431 6777888998887654443332 3444333 2234554 2332221 12234
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-Ccchh---hhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~~Gfi---~nRl~~----a~~~Ea~~l~~~-Gv~~~dID~~~-~~~G 526 (725)
.++.+ ++++++.++++++.+|+.++++++ ..+.. +|+++. .+++|++.+.+. |+++++++.++ .+.+
T Consensus 137 ~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~ 213 (302)
T 2h78_A 137 FMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSG 213 (302)
T ss_dssp EEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT
T ss_pred EEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 44444 699999999999999999999976 33333 565544 477899988876 89999999998 5443
No 99
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.67 E-value=6.4e-17 Score=169.50 Aligned_cols=187 Identities=14% Similarity=0.104 Sum_probs=127.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
+||||||+|.||.+||.+|+++||+|++||+++++++.. .+.| ....+++ +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcC-------------CeEeCCHHHHHhc
Confidence 589999999999999999999999999999999886543 2222 2334444 77899
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccCCCCcEEEEecCCCCCCCC-------eee
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVMP-------LLE 457 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~~~r~ig~h~~~p~~~~~-------lve 457 (725)
||+||.|+|.+..+...+...+.+.++++.+++..+ +..+. ++++.+... |.+|.+.|..+. .+.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~s-T~~p~~~~~~~~~~~~~----g~~~ldapVsGg~~~a~~g~l~ 136 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSMS-TISPETSRQLAQVHEWY----GAHYVGAPIFARPEAVRAKVGN 136 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEECS-CCCHHHHHHHHHHHHHT----TCEEEECCEECCHHHHHHTCCE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEECC-CCChHHHHHHHHHHHhc----CCceecCCcCCCccccccccce
Confidence 999999999888777766677888888998887544 44443 333333221 445554443321 122
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc-----hhhhhhh----HHHHHHHHHHHHc-CCCHHHHHHHH-HhcC
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSFG 526 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G-----fi~nRl~----~a~~~Ea~~l~~~-Gv~~~dID~~~-~~~G 526 (725)
++.+. +++++++++++++.+|+.++++++.+| -++|.++ ...+.|++.+.+. |++++++-.++ .+.+
T Consensus 137 im~gG--~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~ 214 (297)
T 4gbj_A 137 ICLSG--NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLF 214 (297)
T ss_dssp EEEEE--CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTT
T ss_pred eeccc--chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcc
Confidence 33332 689999999999999999999986555 2345443 3445699888866 99999998888 4443
No 100
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.66 E-value=1.6e-16 Score=167.89 Aligned_cols=191 Identities=12% Similarity=0.096 Sum_probs=134.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
..|+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..++++ +.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g-------------~~~~~~~~~~ 74 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------HG-------------ASVCESPAEV 74 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TT-------------CEECSSHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeEcCCHHHH
Confidence 45789999999999999999999999999999999988766431 12 3334455 56
Q ss_pred ccCCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC----CCCCe
Q 004891 385 FKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPL 455 (725)
Q Consensus 385 l~~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~----~~~~l 455 (725)
+++||+||+|+|++..++..++ +++.+.++++++|++.+++.+.. .+.+.+. ....|+. ||.... ..+.+
T Consensus 75 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l 153 (310)
T 3doj_A 75 IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQL 153 (310)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCE
T ss_pred HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCe
Confidence 7899999999997766665544 66778888999887654433322 2333222 2223433 322110 11233
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc------hhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 004891 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 524 (725)
Q Consensus 456 veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G------fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~-~~ 524 (725)
..++.+ ++++++.++++++.+|+.++++++ +| ++.|.++ .+.++|++.+.+. |++++++..++ .+
T Consensus 154 ~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 229 (310)
T 3doj_A 154 IILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLG 229 (310)
T ss_dssp EEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred EEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 445555 589999999999999999999986 55 4556553 3556899988876 89999999998 54
Q ss_pred c
Q 004891 525 F 525 (725)
Q Consensus 525 ~ 525 (725)
.
T Consensus 230 ~ 230 (310)
T 3doj_A 230 A 230 (310)
T ss_dssp T
T ss_pred c
Confidence 3
No 101
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.65 E-value=5.3e-16 Score=163.47 Aligned_cols=191 Identities=12% Similarity=0.116 Sum_probs=132.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| ....++++ +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g------------~~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-----------EG------------ACGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT------------CSEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------cC------------CccccCCHHHHHh
Confidence 468999999999999999999999999999999998776532 12 12214444 6679
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC----CCCCeee
Q 004891 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPLLE 457 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~----~~~~lve 457 (725)
+||+||+|+|++..++..++ +++.+.++++++|++.++..+.. .+.+.+. ....|+. ||.... ....+..
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 142 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTV 142 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEE
Confidence 99999999997666655544 56778888999887554433322 3333332 2233444 432111 1113344
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc------hhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G------fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~-~~~ 525 (725)
++.+ ++++++.++++++.+|+.++++++.+| ++.|.+. .+.++|++.+.+. |++++++..++ .+.
T Consensus 143 ~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 218 (303)
T 3g0o_A 143 MASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAA 218 (303)
T ss_dssp EEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTST
T ss_pred EeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 4444 689999999999999999999987454 2334432 3457899888866 89999999998 543
No 102
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.64 E-value=2e-16 Score=167.23 Aligned_cols=188 Identities=14% Similarity=0.086 Sum_probs=125.9
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC--hHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
+.++||+|||+|.||.+||..|+++|+ +|++||++ ++..+... +.| +..+++.
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-----------~~g-------------~~~~~~~ 77 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-----------ELG-------------VSCKASV 77 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-----------HTT-------------CEECSCH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-----------HCC-------------CEEeCCH
Confidence 356799999999999999999999999 99999997 45544332 112 3334454
Q ss_pred -ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-C--CCcEEEEecCCCC--CCCC
Q 004891 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-S--QDRIIGAHFFSPA--HVMP 454 (725)
Q Consensus 383 -~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~--~~r~ig~h~~~p~--~~~~ 454 (725)
+.+++||+||+|||++... +++.++.+.++++++|++.+|..+.. .+...+. . ..+|+....+.|+ ....
T Consensus 78 ~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g~ 155 (312)
T 3qsg_A 78 AEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHR 155 (312)
T ss_dssp HHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGGG
T ss_pred HHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcCC
Confidence 5678999999999977665 46788999999999988766554433 2222221 1 2234432222211 1225
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcch-----hhhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-R 523 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~nRl~~----a~~~Ea~~l~~~-Gv~~~dID~~~-~ 523 (725)
+..++.|+.+ +.++++++.+|+.++++++.+|. ++|..+. .+++|++.+.+. |++++-++ ++ .
T Consensus 156 l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~-~l~~ 229 (312)
T 3qsg_A 156 VPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLA-SLDA 229 (312)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH-HHHH
T ss_pred EEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHh
Confidence 6667777632 88999999999999999875552 3344433 667899887776 89885454 45 4
Q ss_pred hc
Q 004891 524 SF 525 (725)
Q Consensus 524 ~~ 525 (725)
++
T Consensus 230 ~~ 231 (312)
T 3qsg_A 230 SF 231 (312)
T ss_dssp HS
T ss_pred cC
Confidence 44
No 103
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.64 E-value=5.3e-16 Score=162.86 Aligned_cols=185 Identities=18% Similarity=0.165 Sum_probs=130.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.++
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~ 70 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-----------A-------------GATLADSVADVAA 70 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-----------T-------------TCEECSSHHHHTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCEEcCCHHHHHh
Confidence 358999999999999999999999999999999988766432 1 23445565 4566
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC---CCCCeeeEec
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEIVR 460 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lveii~ 460 (725)
||+||+|+|++..++ .+++++.+.++++++|++.+++.+.. .+.+.+. ...+|+....+.++ ..+.+..++.
T Consensus 71 -aDvvi~~vp~~~~~~-~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~g 148 (296)
T 3qha_A 71 -ADLIHITVLDDAQVR-EVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVG 148 (296)
T ss_dssp -SSEEEECCSSHHHHH-HHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEE
T ss_pred -CCEEEEECCChHHHH-HHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEec
Confidence 999999999766554 45588888899999887655443332 3333332 22233332111111 1123445555
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc------hhhhhhh---HHHHHHHHHHHHc-CCCHHHH------HHHH
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRI------DSAI 522 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G------fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dI------D~~~ 522 (725)
+ ++++++.++++++.+|+.++++++ +| ++.|.+. ...++|++.+.+. |++++++ ..++
T Consensus 149 g---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 149 A---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp C---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred C---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 5 589999999999999999999976 44 4445543 3457899988876 8999999 7777
No 104
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.63 E-value=1.4e-16 Score=166.63 Aligned_cols=186 Identities=13% Similarity=0.124 Sum_probs=130.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..+++. +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVA-----------L-------------GARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHH-----------H-------------TCEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHH
Confidence 468999999999999999999999999999999998776532 1 13334455 5678
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCChH--HHhcccCCCCcEEEEecCCCCCCC--------C
Q 004891 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPAHVM--------P 454 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~~~~r~ig~h~~~p~~~~--------~ 454 (725)
+||+||+|+|++..++..++ +++.+.++++++|++.+++.+.. .+.+.+... |.||+++|..+ .
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~----g~~~~~~pv~g~~~~a~~g~ 132 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTAR----GGRFLEAPVSGTKKPAEDGT 132 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECCEECCHHHHHHTC
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEECCccCCHHHHhcCC
Confidence 99999999997666655544 66778888898887554433322 233322211 23443333221 2
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc------hhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-R 523 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G------fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~-~ 523 (725)
+..++.+ ++++++.++++++.+|++++++++ +| ++.|.++ ...++|++.+.+. |++++++..++ .
T Consensus 133 l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 133 LIILAAG---DQSLFTDAGPAFAALGKKCLHLGE-VGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp EEEEEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEEEeC---CHHHHHHHHHHHHHhCCCEEEcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 2333333 689999999999999999999976 44 2335443 3456899888866 89999999998 5
Q ss_pred hc
Q 004891 524 SF 525 (725)
Q Consensus 524 ~~ 525 (725)
+.
T Consensus 209 ~~ 210 (287)
T 3pdu_A 209 GA 210 (287)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 105
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.63 E-value=5.3e-16 Score=162.23 Aligned_cols=187 Identities=15% Similarity=0.102 Sum_probs=132.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------L-------------GAERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHhc
Confidence 58999999999999999999999999999999998766532 1 23445555 56788
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCChH---HHhcccC-CCCcEEEEecCCCCC----CCCeee
Q 004891 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN---IVGEKTS-SQDRIIGAHFFSPAH----VMPLLE 457 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~-~~~r~ig~h~~~p~~----~~~lve 457 (725)
||+||+|+|++..++..++ +++.+.++++++|++. |+..+. .+.+.+. ...+|+. ||+.... ...+..
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 135 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDM-STVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLII 135 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeC-CCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEE
Confidence 9999999997767665554 7788889999988765 444433 2223222 2233444 3322111 123344
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc------hhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G------fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~-~~~ 525 (725)
++.+ ++++++.++++++.+|+.++++++ +| ++.|-+. ...++|++.+.+. |++++++..++ .+.
T Consensus 136 ~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~ 210 (287)
T 3pef_A 136 LAAG---DRNLYDEAMPGFEKMGKKIIHLGD-VGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGA 210 (287)
T ss_dssp EEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EEeC---CHHHHHHHHHHHHHhCCCeEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 5544 589999999999999999999976 44 2334332 3467899988876 89999999998 544
No 106
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.62 E-value=9.6e-16 Score=159.25 Aligned_cols=210 Identities=10% Similarity=-0.033 Sum_probs=138.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
+||+|||+|.||.+||..|+++ ++| .+||++++++++..+. ++. .++++ +.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~----------------------~g~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEV----------------------YGG--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHH----------------------TCC--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHH----------------------cCC--ccCCHHHHHh
Confidence 5899999999999999999988 999 5999999887664321 112 23444 4578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecC----CCCCC-CCeeeEecC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFF----SPAHV-MPLLEIVRT 461 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~----~p~~~-~~lveii~~ 461 (725)
+||+||+|+|++. ..+++.++. .++++|++.+++.+.+.+... .+.+.|+. +++.. ....++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999654 567766654 677888766556676655433 45667743 32221 112222222
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCc--------chhhhhhhHHHHHHHHHHHH-cCCCHH----------HHHHHH
Q 004891 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCT--------GFAVNRAFFPYSQSARLLVS-LGVDVF----------RIDSAI 522 (725)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~~--------Gfi~nRl~~a~~~Ea~~l~~-~Gv~~~----------dID~~~ 522 (725)
...+++.++.++++++.+|+.++++++.. ++..| ++..++.++..++. .|++.+ .++.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~ 206 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIK 206 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 22356679999999999999999887421 34334 65667778877777 588544 566666
Q ss_pred -Hh-cCCCccHHHHHHhhchHHHHHHHHHHHhhC
Q 004891 523 -RS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (725)
Q Consensus 523 -~~-~G~p~Gpf~~~D~~Gld~~~~~~~~l~~~~ 554 (725)
.+ .+.++||++..|..+++.....++.+.+++
T Consensus 207 ~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 207 KMRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp HSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred hcChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 34 556789999999999999999998875544
No 107
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.61 E-value=2.1e-15 Score=160.09 Aligned_cols=187 Identities=16% Similarity=0.162 Sum_probs=130.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.++||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..++++ +.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g-------------~~~~~~~~e~~ 85 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------LG-------------ATIHEQARAAA 85 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CEEESSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CC-------------CEeeCCHHHHH
Confidence 3569999999999999999999999999999999998766431 12 3445555 567
Q ss_pred cCCCEEEEeccCChHHHHHHHH-HHHHhCCCCeEEEecCCCCChH--HHhcccCCCCcEEEEecCCCCCC--------CC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPAHV--------MP 454 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~-~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~~~~r~ig~h~~~p~~~--------~~ 454 (725)
++||+||+|+|++..++..+.. ++.+.++++++|++.+++.+.. .+.+.+... |.||++.|.. ++
T Consensus 86 ~~aDvVi~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~----g~~~~~~pv~g~~~~a~~g~ 161 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGAL----GIAHLDTPVSGGTVGAEQGT 161 (320)
T ss_dssp TTCSEEEECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECCEECHHHHHHHTC
T ss_pred hcCCEEEEECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc----CCEEEeCCCcCCHhHHhcCC
Confidence 8999999999976666544432 6777788888887654443322 333332211 2344333222 23
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-Ccc----hhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 524 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~~G----fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~-~~ 524 (725)
+..++.| ++++++.++++++.+ +.++++++ ..| ++.|-+. .+.++|++.+.+. |++++++..++ .+
T Consensus 162 l~i~~gg---~~~~~~~~~~ll~~~-~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 237 (320)
T 4dll_A 162 LVIMAGG---KPADFERSLPLLKVF-GRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGG 237 (320)
T ss_dssp EEEEEES---CHHHHHHHHHHHHHH-EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTS
T ss_pred eeEEeCC---CHHHHHHHHHHHHhc-CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcc
Confidence 3445554 589999999999999 88888876 222 3334432 3467899988876 89999999998 54
Q ss_pred c
Q 004891 525 F 525 (725)
Q Consensus 525 ~ 525 (725)
.
T Consensus 238 ~ 238 (320)
T 4dll_A 238 F 238 (320)
T ss_dssp T
T ss_pred c
Confidence 4
No 108
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.60 E-value=2.9e-15 Score=149.26 Aligned_cols=159 Identities=9% Similarity=0.014 Sum_probs=124.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+.+||+|||+|.||+++|..|.++|++|++||+. +.++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~ 42 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIR 42 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhc
Confidence 3468999999999999999999999999999983 1245
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeeeEecCCCCCH
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~ 466 (725)
+|| |.|||.+ ...+++.++.+.++++++|++.+++.+...+........+|++.||.... ..++... ++
T Consensus 43 ~aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~-----~~~i~a~--d~ 111 (232)
T 3dfu_A 43 DFE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQD-----RWVASAL--DE 111 (232)
T ss_dssp GCS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETT-----EEEEEES--SH
T ss_pred cCC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCC-----ceeeeCC--CH
Confidence 688 8999965 56788899999999999998766566655455444556789999987432 1233322 68
Q ss_pred HHHHHHHHHHHHcCCeeEEEc--CCcch----hhhhhhHHHHHHHHHHH---HcCC-CHHHH
Q 004891 467 QVILDLMTVGKIIKKVPVVVG--NCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFRI 518 (725)
Q Consensus 467 e~~~~~~~l~~~lGk~~v~v~--d~~Gf----i~nRl~~a~~~Ea~~l~---~~Gv-~~~dI 518 (725)
+.++.++++++.+|.+++.+. +.++| ..++.+.++.++|..++ ++|+ +++|+
T Consensus 112 ~a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d~ 173 (232)
T 3dfu_A 112 LGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDI 173 (232)
T ss_dssp HHHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh
Confidence 899999999999999999995 45566 44677788999999999 8897 88883
No 109
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.58 E-value=1.7e-14 Score=150.64 Aligned_cols=188 Identities=13% Similarity=0.040 Sum_probs=133.5
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
|+||+|||+ |.||.++|..|+++|++|++||++++.++...+ .| +..++..+.++
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 66 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-----------MG-------------IPLTDGDGWID 66 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-----------TT-------------CCCCCSSGGGG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------cC-------------CCcCCHHHHhc
Confidence 579999999 999999999999999999999999988765421 12 12233336788
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCC--------CCCe---
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL--- 455 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~--------~~~l--- 455 (725)
+||+||+|+|+ ....++++++.+.++++++|++.+++.++..+.+ .....++++.||+.|.. ....
T Consensus 67 ~aDvVi~av~~--~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~ 143 (286)
T 3c24_A 67 EADVVVLALPD--NIIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYHG 143 (286)
T ss_dssp TCSEEEECSCH--HHHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSSS
T ss_pred CCCEEEEcCCc--hHHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCccc
Confidence 99999999994 4468888999998999999988666666655554 33335799999998766 2222
Q ss_pred -----eeEecCCCCCHHHHHHHHHHHHHcCC---eeEEEcCC-cch----hhhhhhHHHH---HHHHH-HHHc-CCCHHH
Q 004891 456 -----LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGNC-TGF----AVNRAFFPYS---QSARL-LVSL-GVDVFR 517 (725)
Q Consensus 456 -----veii~~~~t~~e~~~~~~~l~~~lGk---~~v~v~d~-~Gf----i~nRl~~a~~---~Ea~~-l~~~-Gv~~~d 517 (725)
..++.+..++++.++.++++++.+|. .++++++. .+. +.|-...+++ .|++. .... |+++++
T Consensus 144 ~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~ 223 (286)
T 3c24_A 144 GIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQA 223 (286)
T ss_dssp SSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred ccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 23333334678999999999999999 78888632 222 2343333332 34443 3333 898888
Q ss_pred HHHHH
Q 004891 518 IDSAI 522 (725)
Q Consensus 518 ID~~~ 522 (725)
+-.++
T Consensus 224 ~~~~~ 228 (286)
T 3c24_A 224 ALDFM 228 (286)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 110
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.57 E-value=2e-14 Score=152.66 Aligned_cols=189 Identities=13% Similarity=0.066 Sum_probs=135.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCC----CcEEEEeCChH--HHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G----~~V~~~d~~~e--~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
+++||+|||+|.||.+||..|+++| ++|++||++++ +++... +.| +..++
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~-----------~~G-------------~~~~~ 76 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALR-----------KMG-------------VKLTP 76 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHH-----------HHT-------------CEEES
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHH-----------HcC-------------CEEeC
Confidence 3458999999999999999999999 89999999986 555432 112 23333
Q ss_pred Cc-ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCC---CCcEEEEecCCCCCCCCee
Q 004891 381 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLL 456 (725)
Q Consensus 381 ~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~---~~r~ig~h~~~p~~~~~lv 456 (725)
+. +.+++||+||+||| .....+++.++.+.++++++|++.++++++..+.+.+.. ..++++.|+..|.......
T Consensus 77 ~~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~ 154 (322)
T 2izz_A 77 HNKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGA 154 (322)
T ss_dssp CHHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEE
T ss_pred ChHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCe
Confidence 44 56788999999999 567778889999889899999988888888776655432 4579999998888776655
Q ss_pred eEe-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCc----ch--hhhhhhHHHHHHHHH--HHHcCCCHHHHHHHH
Q 004891 457 EIV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCT----GF--AVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (725)
Q Consensus 457 eii-~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~----Gf--i~nRl~~a~~~Ea~~--l~~~Gv~~~dID~~~ 522 (725)
.++ .++.++++.++.++++++.+|..+++..+.- +. ..+.+++.+ .|++. ....|+++++.-.++
T Consensus 155 ~v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~a~~g~gpa~~~~~-~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 155 TVYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTA-LDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHHHHTTTHHHHHHHH-HHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHHhcCHHHHHHHH-HHHHHHHHHHcCCCHHHHHHHH
Confidence 555 5777789999999999999997654432210 10 112232322 34332 345588887766665
No 111
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.55 E-value=1.4e-14 Score=161.30 Aligned_cols=205 Identities=13% Similarity=0.076 Sum_probs=143.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHH--HhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKAN--NALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~--~~~~~i~~~~~~-~~ 384 (725)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+... ...+.| + .+... ...+++.+++++ ++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~----~i~e~g-l-~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGV----PIHEPG-L-KEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCC----SSCCTT-H-HHHHHHHHHTTCEEEECCHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCC----CcCCCC-H-HHHHHHhcccCCEEEECCHHHH
Confidence 368999999999999999999999999999999998877543100 000000 0 00001 012467788888 57
Q ss_pred ccCCCEEEEeccC--------ChHHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccC----CC---CcEEEEec
Q 004891 385 FKDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQ---DRIIGAHF 446 (725)
Q Consensus 385 l~~aDlVIeavpe--------~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~----~~---~r~ig~h~ 446 (725)
+++||+||+|||+ |+....+++++|.++++++++|++ .|++++. .+.+.+. .+ ..+ .+.
T Consensus 82 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~~--~v~ 158 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQMF--SVV 158 (478)
T ss_dssp HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCCE--EEE
T ss_pred hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCccE--EEE
Confidence 8999999999997 458889999999999999998864 4576553 2222111 11 222 235
Q ss_pred CCCCCCCCee---------eEecCCCCCH----HHHHHHHHHHHHcCC--eeEEEcC-----Ccchhhhhhh---HHHHH
Q 004891 447 FSPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FPYSQ 503 (725)
Q Consensus 447 ~~p~~~~~lv---------eii~~~~t~~----e~~~~~~~l~~~lGk--~~v~v~d-----~~Gfi~nRl~---~a~~~ 503 (725)
++|....+.. .++.|.. ++ ++.+.+.++++.+++ .++++.+ ..+++.|.+. .+++|
T Consensus 159 ~~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~n 237 (478)
T 2y0c_A 159 SNPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMN 237 (478)
T ss_dssp ECCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666665543 3555543 34 789999999998875 5677654 4567778765 57889
Q ss_pred HHHHHHHc-CCCHHHHHHHH
Q 004891 504 SARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 504 Ea~~l~~~-Gv~~~dID~~~ 522 (725)
|+..+.+. |++++++..++
T Consensus 238 E~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 238 ELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHH
Confidence 99988877 89999999887
No 112
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.55 E-value=1.8e-15 Score=157.13 Aligned_cols=94 Identities=23% Similarity=0.315 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCC-CCCCCHHH
Q 004891 623 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 701 (725)
Q Consensus 623 ~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l 701 (725)
.++||++.++++||+.++++|+ ++++||.++..|+|+|++..|||+++|.+|+|++.+.++.+++.+++ +|.|+++|
T Consensus 174 fi~Nrll~~~~~EA~~l~~~Gv--~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~l 251 (293)
T 1zej_A 174 SLVNRFNAAVLSEASRMIEEGV--RAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAYYASLYLYKRFGDEKFKPPEWL 251 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTC--CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHHHHHHHHHHHHcCCCcCCCCHHH
Confidence 7999999999999999999998 79999999999999988888999999999999999999999999987 89999999
Q ss_pred HHHH-------HcCCCCCCCCCCC
Q 004891 702 EERA-------TKGIPLSAPVSSS 718 (725)
Q Consensus 702 ~~~~-------~~g~gf~~~~~~~ 718 (725)
++|+ |+|+|||+|++..
T Consensus 252 ~~~v~~G~lG~Ktg~Gfy~y~~~~ 275 (293)
T 1zej_A 252 QEKIKKGEVGVKAGKGIYEYGPKA 275 (293)
T ss_dssp HHHHHTTCCBGGGTBSSSBCCTTH
T ss_pred HHHHHCCCCccccCCEeeecCcch
Confidence 9999 6899999996543
No 113
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.52 E-value=1.7e-13 Score=144.95 Aligned_cols=193 Identities=12% Similarity=0.058 Sum_probs=127.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc-cCcccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l 385 (725)
++||+|||+|.||.++|..|+++| ++|++||++++..++..+.. +...+.| + .+ +..+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~----~~~~~~g-------------~-~~~s~~e~~ 85 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALR----ARAAELG-------------V-EPLDDVAGI 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHH----HHHHHTT-------------C-EEESSGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHH----HHHHHCC-------------C-CCCCHHHHH
Confidence 468999999999999999999999 99999999984222111111 1111222 2 23 334678
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC--CCCCeeeEec
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA--HVMPLLEIVR 460 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~--~~~~lveii~ 460 (725)
++||+||+|||++... +.+.++.+.++++++|++.+++.+.+ .+.+.+. ...+|+....+.|. ....+..++.
T Consensus 86 ~~aDvVi~avp~~~~~--~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vg 163 (317)
T 4ezb_A 86 ACADVVLSLVVGAATK--AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVA 163 (317)
T ss_dssp GGCSEEEECCCGGGHH--HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEE
T ss_pred hcCCEEEEecCCHHHH--HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEe
Confidence 9999999999966655 34588888999999888655443332 3333332 22345543333332 2335565666
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc------hhhhhh---hHHHHHHHHHHHHc-CCCHHHHHHHHHhc
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAIRSF 525 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G------fi~nRl---~~a~~~Ea~~l~~~-Gv~~~dID~~~~~~ 525 (725)
|+. + +.++++++.+|+.++++++.+| ++.|-+ ..+.++|++.+.+. |++++.++.+..+.
T Consensus 164 g~~---~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 164 GRR---A--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp STT---H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred CCh---H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 653 2 8899999999999999987555 233432 35667899988876 89996666655443
No 114
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.52 E-value=3.4e-14 Score=149.79 Aligned_cols=187 Identities=11% Similarity=0.030 Sum_probs=128.7
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.++||+|||+|.||.+||..|+++|++|++||+++++++...+ .| +...+++ +.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~~~e~~ 63 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-----------AG-------------AHLCESVKAAL 63 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-----------HT-------------CEECSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHH
Confidence 3578999999999999999999999999999999998776432 12 2234444 567
Q ss_pred cCCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCC-CCC--CCeee
Q 004891 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP-AHV--MPLLE 457 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p-~~~--~~lve 457 (725)
++||+||+|+|++..++.. +. .+... .++++|++.+++.+.. .+.+.+. ...+|+..+.+.+ +.. ..+..
T Consensus 64 ~~aDvVi~~vp~~~~~~~v-~~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i 141 (306)
T 3l6d_A 64 SASPATIFVLLDNHATHEV-LGMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHS 141 (306)
T ss_dssp HHSSEEEECCSSHHHHHHH-HTSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEE
T ss_pred hcCCEEEEEeCCHHHHHHH-hcccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEE
Confidence 8899999999976655544 44 56554 5777776544433322 3333332 3335655433221 111 12333
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEE--cC--Ccchhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v--~d--~~Gfi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
++.| +++++++++++++.+|++++++ ++ ..|...+.++ ...++|++.+.+. |++++++..++
T Consensus 142 ~~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~ 211 (306)
T 3l6d_A 142 IHTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLL 211 (306)
T ss_dssp EEEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4444 5999999999999998899999 75 5567777332 3556799888866 89999999888
No 115
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.52 E-value=4.7e-14 Score=155.95 Aligned_cols=206 Identities=17% Similarity=0.129 Sum_probs=137.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CC-cEEEEeCChH----HHHHHHHHH------HHHHHhhHHcCCCCHHHHHHhhc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTI------EANVRGLVTRGKLTQDKANNALK 374 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~e----~~~~~~~~i------~~~l~~~~~~g~~~~~~~~~~~~ 374 (725)
+++||+|||+|.||.++|..|+++ |+ +|++||++++ +++...+.. +..++.++++ ....+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~--------~~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK--------VVKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH--------HHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh--------hcccC
Confidence 467999999999999999999999 99 9999999999 776643210 0001111100 00135
Q ss_pred CcccccCcccccCCCEEEEeccCCh----------HHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhc-----ccC
Q 004891 375 MLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGE-----KTS 436 (725)
Q Consensus 375 ~i~~~~~~~~l~~aDlVIeavpe~~----------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~-----~~~ 436 (725)
++.++++.+++++||+||+|||++. .......+.+.++++++++|+. .||+++. .+.. ...
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVL-ESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEE-CSCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEE-eCCCChHHHHHHHHHHHHHhcC
Confidence 7888888888999999999998763 3355667889999999998864 4555543 2221 111
Q ss_pred C--CCcEEEEecCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCc-----chhhhhhh-
Q 004891 437 S--QDRIIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKII-KKVPVVVGNCT-----GFAVNRAF- 498 (725)
Q Consensus 437 ~--~~r~ig~h~~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~l-Gk~~v~v~d~~-----Gfi~nRl~- 498 (725)
. ...|.-+ ++|....+.- .|+.|. +++..+.++++++.+ ++.++++++.. .++.|-++
T Consensus 168 ~~~~~d~~v~--~~Pe~~~~G~a~~~~~~~~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 168 LKAGEDFALA--HAPERVMVGRLLKNIREHDRIVGGI--DEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp CCBTTTBEEE--ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCcCCceeEE--eCCccCCccchhhhhcCCcEEEEeC--CHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHH
Confidence 1 1112111 2444333211 255543 688889999999999 88888876522 23444332
Q ss_pred --HHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004891 499 --FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (725)
Q Consensus 499 --~a~~~Ea~~l~~~-Gv~~~dID~~~-~~~ 525 (725)
.+++||+..+.+. |+++.++-.++ ...
T Consensus 244 ~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~ 274 (478)
T 3g79_A 244 LQIAAINQLALYCEAMGINVYDVRTGVDSLK 274 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHCCCc
Confidence 4788999888876 99999988888 443
No 116
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=3e-14 Score=151.30 Aligned_cols=153 Identities=14% Similarity=0.166 Sum_probs=115.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.++||+|||+|.||.+||..|.++|++|++||++++.++.+.+ .| +..+++. +.+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~G-------------~~~~~~~~e~~ 62 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-----------EG-------------FDVSADLEATL 62 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-----------TT-------------CCEESCHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeeeCCHHHHH
Confidence 4578999999999999999999999999999999988776531 22 1223333 233
Q ss_pred ----cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCCCCcEEEEecCCCCC-C------
Q 004891 386 ----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-V------ 452 (725)
Q Consensus 386 ----~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~r~ig~h~~~p~~-~------ 452 (725)
++||+||+|+| ......+++++.+. +++++|++.+|+.. +..+.+... ..+|++.||...+. .
T Consensus 63 ~~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~ 138 (341)
T 3ktd_A 63 QRAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASM 138 (341)
T ss_dssp HHHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCC
T ss_pred HhcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhh
Confidence 35799999999 67788899999887 78898876555432 234444332 46899999987553 1
Q ss_pred -----CCeeeEecCCCCCHH--------HHHHHHHHHHHcCCeeEEEc
Q 004891 453 -----MPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVG 487 (725)
Q Consensus 453 -----~~lveii~~~~t~~e--------~~~~~~~l~~~lGk~~v~v~ 487 (725)
+..+.+++++.++++ .++.++++++.+|..++++.
T Consensus 139 ~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~ 186 (341)
T 3ktd_A 139 DGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSR 186 (341)
T ss_dssp SSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECC
T ss_pred hHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeC
Confidence 224667788878888 99999999999999999885
No 117
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.51 E-value=4.9e-14 Score=146.43 Aligned_cols=157 Identities=17% Similarity=0.160 Sum_probs=126.0
Q ss_pred EEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHH
Q 004891 15 VAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (725)
Q Consensus 15 v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (725)
|+++..+.. ..|+++..+.+.+.++++.+.++ .+++|+|++.| |+|+++.... + ..+..++ ..
T Consensus 120 V~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~--------l-~~~~~i~-~a 183 (304)
T 2f9y_B 120 VVAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS--------L-MQMAKTS-AA 183 (304)
T ss_dssp CBEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH--------H-HHHHHHH-HH
T ss_pred EEEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH--------H-HHHHHHH-HH
Confidence 333444433 36999999999999999999988 89999999866 8888664320 1 1122333 33
Q ss_pred H---hhCCCcEEEEEcccccchh-hHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCC
Q 004891 94 I---EDCKKPIVAAVEGLALGGG-LELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI 169 (725)
Q Consensus 94 l---~~~~kp~Iaav~G~a~GgG-~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~ 169 (725)
+ ...++|+|++|+|.|+||| +.++++||++||.++|+|++. |...+++.+|.. ++++..
T Consensus 184 l~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~ 246 (304)
T 2f9y_B 184 LAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQ 246 (304)
T ss_dssp HHHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTT
T ss_pred HHHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccC
Confidence 4 4459999999999999999 788999999999999999987 456677777753 578999
Q ss_pred CHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcC
Q 004891 170 TSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (725)
Q Consensus 170 ~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (725)
+|+++.++|+||.|++++++.+.+.+++..++..+
T Consensus 247 ~Ae~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 247 RSEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp BHHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999988653
No 118
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.51 E-value=3.1e-14 Score=149.83 Aligned_cols=89 Identities=27% Similarity=0.378 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHh-CC-CCCCCH
Q 004891 622 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GN-FFKPSR 699 (725)
Q Consensus 622 ~~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~-~~-~~~p~~ 699 (725)
..+.||++.+++||+++++++|++ ++++||.++..|+|||+ |||+++|.+|+|.+++.++.|.+.+ ++ +|.|++
T Consensus 204 g~i~nr~l~~~~~Ea~~l~~~g~~-~~~~id~~~~~g~g~p~---GP~~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~ 279 (302)
T 1f0y_A 204 GFIVNRLLVPYLMEAIRLYERGDA-SKEDIDTAMKLGAGYPM---GPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPSP 279 (302)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHHHHHTTTTCGGGCCCH
T ss_pred cccHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHccCCCccCcCH
Confidence 468999999999999999999999 99999999999999996 9999999999999999999999988 77 599999
Q ss_pred HHHHHH-------HcCCCCCCC
Q 004891 700 FLEERA-------TKGIPLSAP 714 (725)
Q Consensus 700 ~l~~~~-------~~g~gf~~~ 714 (725)
+|++|+ |+|+|||+|
T Consensus 280 ~l~~~~~~g~~G~k~g~Gfy~y 301 (302)
T 1f0y_A 280 SLNKLVAENKFGKKTGEGFYKY 301 (302)
T ss_dssp HHHHHHHTTCCBTTTTBSSSBC
T ss_pred HHHHHHHcCCCccccCcEeeeC
Confidence 999999 678999999
No 119
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.50 E-value=2.7e-14 Score=151.33 Aligned_cols=189 Identities=15% Similarity=0.127 Sum_probs=133.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.++||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +...++. +.+
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 84 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-----------EG-------------ARLGRTPAEVV 84 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-----------TT-------------CEECSCHHHHH
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEEcCCHHHHH
Confidence 3578999999999999999999999999999999987665321 12 1223344 557
Q ss_pred cCCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCC--hHHHhcccC-CCCcEEEEecCCCC---CCCCeee
Q 004891 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~-~~~r~ig~h~~~p~---~~~~lve 457 (725)
++||+||+|+|++..++..+.. .+.+.+.++++|++.+++.+ ...+.+.+. ...++++.+++..+ ..+.++.
T Consensus 85 ~~~DvVi~av~~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~ 164 (316)
T 2uyy_A 85 STCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 164 (316)
T ss_dssp HHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEE
T ss_pred hcCCEEEEeCCCHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEE
Confidence 8899999999976666544432 13366788888775544332 334555442 45578877665432 2334555
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-----cchhhhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-----TGFAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-----~Gfi~nRl---~~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
++.+ +++.++.+.++++.+|+.++++++. ..++.|.+ +..+++|++.+.+. |+++++++.++
T Consensus 165 ~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 165 LAAG---DRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEEE---CHHHHHHTHHHHHHHEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EeCC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 6666 5889999999999999998888662 12455665 35677899888765 89999999888
No 120
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.50 E-value=2.9e-13 Score=139.35 Aligned_cols=183 Identities=12% Similarity=0.090 Sum_probs=129.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
+||+|||+|.||.++|..|+++| ++|++||+++++++...+. .| +..+++. +.+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~- 56 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH- 56 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-
T ss_pred CEEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-
Confidence 37999999999999999999999 9999999999887664321 01 2334444 567
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCC-eeeEecCCCCC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 465 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~-lveii~~~~t~ 465 (725)
+||+||+|+| .....+++.++.+ + +++|++.++++++..+.+.+....+++..++..|..... ...++++..++
T Consensus 57 ~~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~ 131 (263)
T 1yqg_A 57 SDDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVS 131 (263)
T ss_dssp TTSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSC
T ss_pred cCCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCC
Confidence 9999999999 5556677766654 4 888989889998888877766555788886655655544 45567777789
Q ss_pred HHHHHHHHHHHHHcCCeeEEEc-CC--------cchhhhhhhHHHHHHHHH-HHHcCCCHHHHHHHH
Q 004891 466 AQVILDLMTVGKIIKKVPVVVG-NC--------TGFAVNRAFFPYSQSARL-LVSLGVDVFRIDSAI 522 (725)
Q Consensus 466 ~e~~~~~~~l~~~lGk~~v~v~-d~--------~Gfi~nRl~~a~~~Ea~~-l~~~Gv~~~dID~~~ 522 (725)
++.++.+.++++.+|..+ +++ +. .| ..+.++..++..... ....|++++++...+
T Consensus 132 ~~~~~~~~~l~~~~g~~~-~~~~~~~~~~~~al~g-~~~~~~~~~~~~l~e~~~~~G~~~~~~~~~~ 196 (263)
T 1yqg_A 132 ETDRRIADRIMKSVGLTV-WLDDEEKMHGITGISG-SGPAYVFYLLDALQNAAIRQGFDMAEARALS 196 (263)
T ss_dssp HHHHHHHHHHHHTTEEEE-ECSSTTHHHHHHHHTT-SHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEE-EeCChhhccHHHHHHc-cHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999876 666 41 11 111222222221111 345588887776665
No 121
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.50 E-value=9.1e-14 Score=138.12 Aligned_cols=140 Identities=16% Similarity=0.182 Sum_probs=109.5
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEEEc
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~ 106 (725)
.++..+.+++.+.|..++++++++.|+|.= .|.|+++.. ...++ +.|..+++||++.++
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~I----nSPGG~v~a----------------g~~I~-~~i~~~~~pV~t~v~ 111 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLYV----NTPGGSVSA----------------GLAIV-DTMNFIKADVQTIVM 111 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEEE----EECCBCHHH----------------HHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEE----ECcCCCHHH----------------HHHHH-HHHHhcCCCEEEEEc
Confidence 488999999999999999887788887752 333444321 22344 668889999999999
Q ss_pred ccccchhhHHhhhcCE--EEeeCCceEeCcccccCCCCCchh------------------hchHhhhhCH--HHHHHHHH
Q 004891 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGG------------------TQRLPRLVGL--SKAIEMML 164 (725)
Q Consensus 107 G~a~GgG~~lalacD~--~ia~~~a~~~~pe~~~Gl~p~~g~------------------~~~l~r~vG~--~~a~~l~l 164 (725)
|.|.++|+.|+++||. |+|.++++|++++.. |..|..|. ...+++..|. .++.+++.
T Consensus 112 G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~ 190 (218)
T 1y7o_A 112 GMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAE 190 (218)
T ss_dssp EEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999999999987 44443332 2456777776 58889999
Q ss_pred cCCCCCHHHHHHcCCcceecCcch
Q 004891 165 LSKSITSEEGWKLGLIDAVVTSEE 188 (725)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~ 188 (725)
+|+.++|+||+++||||+|++.++
T Consensus 191 ~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 191 RDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp SCCCBCHHHHHHHTSCSEECCCC-
T ss_pred CCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999999999999999999998765
No 122
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.49 E-value=4e-14 Score=151.75 Aligned_cols=175 Identities=11% Similarity=0.043 Sum_probs=119.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
..+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..++++ +.+
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-------------~~~~~s~~e~~ 76 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------EG-------------IAGARSIEEFC 76 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CBCCSSHHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CEEeCCHHHHH
Confidence 3478999999999999999999999999999999998776431 12 2334444 455
Q ss_pred cCC---CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC---CCCCee
Q 004891 386 KDV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (725)
Q Consensus 386 ~~a---DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lv 456 (725)
+++ |+||+|||.+ ...+++.++.+.++++++|++.+++.+.. .+.+.+. ...+|+....+.++ ..++
T Consensus 77 ~~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-- 152 (358)
T 4e21_A 77 AKLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-- 152 (358)
T ss_dssp HHSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC--
T ss_pred hcCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC--
Confidence 667 9999999977 55677789999999999998776665433 3333332 22344443222111 1112
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcC--------------------CeeEEEcC-Ccchhh----hhhh---HHHHHHHHHH
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAV----NRAF---FPYSQSARLL 508 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lG--------------------k~~v~v~d-~~Gfi~----nRl~---~a~~~Ea~~l 508 (725)
.++.|. ++++++.++++++.+| +.++++++ ..|..+ |-++ ...+.|++.+
T Consensus 153 ~im~GG--~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~l 230 (358)
T 4e21_A 153 CLMIGG--EKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNI 230 (358)
T ss_dssp EEEEES--CHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeecC--CHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244433 6899999999999999 56788875 344433 3222 2445688888
Q ss_pred HHc
Q 004891 509 VSL 511 (725)
Q Consensus 509 ~~~ 511 (725)
++.
T Consensus 231 a~~ 233 (358)
T 4e21_A 231 LHH 233 (358)
T ss_dssp HHT
T ss_pred HHh
Confidence 876
No 123
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.49 E-value=1.5e-13 Score=143.72 Aligned_cols=159 Identities=14% Similarity=0.102 Sum_probs=119.5
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
|+++||+|||+|.||.++|..|+++ |++|++||++++.++.+. +.|... ..++++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~~-----------~~~~~~~ 61 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL-----------ERGIVD-----------EATADFK 61 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH-----------HTTSCS-----------EEESCTT
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH-----------HcCCcc-----------cccCCHH
Confidence 3467999999999999999999988 689999999998876542 122110 234455
Q ss_pred ccccCCCEEEEeccCChHHHHHHHHHHHHh-CCCCeEEEecCCCCC--hHHHhcccCC-CCcEEEEecC------CCCC-
Q 004891 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH- 451 (725)
Q Consensus 383 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~s~tS~~~--~~~l~~~~~~-~~r~ig~h~~------~p~~- 451 (725)
+.+++||+||+|+| .....+++.++.+. ++++++|++.+++.. ...+.+.+.. ..++++.||+ .|..
T Consensus 62 ~~~~~aDvVilavp--~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a 139 (290)
T 3b1f_A 62 VFAALADVIILAVP--IKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAA 139 (290)
T ss_dssp TTGGGCSEEEECSC--HHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSC
T ss_pred HhhcCCCEEEEcCC--HHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHh
Confidence 56789999999999 55557888999888 889998875444322 2455555543 5689999997 4443
Q ss_pred -----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 452 -----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 452 -----~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
.+..+.++++..++++.++.+.++++.+|..++++.+
T Consensus 140 ~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 140 NVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp CTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred hHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3355778888778899999999999999998888764
No 124
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.47 E-value=1.4e-13 Score=144.69 Aligned_cols=187 Identities=16% Similarity=0.128 Sum_probs=129.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
.+||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +...+++ +.++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 59 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-----------QG-------------AQACENNQKVAA 59 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-----------TT-------------CEECSSHHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHh
Confidence 358999999999999999999999999999999988665421 12 2233444 4567
Q ss_pred CCCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCC--hHHHhcccCC-CCcEEEEecCCCCC----CCCeee
Q 004891 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLE 457 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~-~~r~ig~h~~~p~~----~~~lve 457 (725)
++|+||+|+|.+..++..+. .++.+.++++++|++.+++.+ ...+.+.+.. ..+++.. +..+.. ...+..
T Consensus 60 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~ 138 (301)
T 3cky_A 60 ASDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTI 138 (301)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEE
T ss_pred CCCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEE
Confidence 89999999997666655544 378888899999988777663 3455544432 2234431 211110 011233
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-Ccch----hhhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGF----AVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~~Gf----i~nRl---~~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
++.+ +++.++.+.++++.+|..++++++ ..|. +.|.+ +...++|++.+.+. |++++++..++
T Consensus 139 ~~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 139 MVGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp EEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3343 689999999999999998888764 3343 34555 34567898887765 89999988887
No 125
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.47 E-value=4.3e-13 Score=137.82 Aligned_cols=185 Identities=11% Similarity=0.093 Sum_probs=130.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
++||+|||+|.||..++..|.+.|++|++||+++++++...+.+ | +..++++ +.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------g-------------~~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------A-------------LPYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------T-------------CCBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------C-------------CEeeCCHHHHHh
Confidence 35899999999999999999999999999999998876643210 1 2233444 4567
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCC-eeeEecCCCCC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 465 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~-lveii~~~~t~ 465 (725)
++|+||+|+| .....+++.+ +.+++++++.+++++++.+.+.+....+++..|+..|..... ...++++..++
T Consensus 60 ~~D~Vi~~v~--~~~~~~v~~~----l~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIK--PQLFETVLKP----LHFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSC--GGGHHHHHTT----SCCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeC--cHhHHHHHHH----hccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 9999999999 4444455544 347788888888888888877766555788888877776655 45566777789
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCc-c-h-----hhhhhhHHHHHHHH-HHHHcCCCHHHHHHHH
Q 004891 466 AQVILDLMTVGKIIKKVPVVVGNCT-G-F-----AVNRAFFPYSQSAR-LLVSLGVDVFRIDSAI 522 (725)
Q Consensus 466 ~e~~~~~~~l~~~lGk~~v~v~d~~-G-f-----i~nRl~~a~~~Ea~-~l~~~Gv~~~dID~~~ 522 (725)
++.++.++++++.+| .++++++.. . + -.|.++..+..... .....|++++++-.++
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~ 197 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIV 197 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 567776521 0 0 01223333332221 2445588877766665
No 126
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.45 E-value=6.3e-13 Score=146.08 Aligned_cols=203 Identities=16% Similarity=0.132 Sum_probs=133.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHH--hhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN--ALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~--~~~~i~~~~~~-~~l 385 (725)
-+|+|||+|.||.++|..|+++|++|++||+++++++...+... ...+.| + .+-... ..+++++++++ +++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~----~~~epg-l-~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVM----PIYEPG-L-DALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCC----SSCCTT-H-HHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCC----CccCCC-H-HHHHHhhcccCCEEEECCHHHHH
Confidence 47999999999999999999999999999999998877532100 000000 0 000000 12567888888 688
Q ss_pred cCCCEEEEeccCChH---------HHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccC----CCCcEEEEecCCC
Q 004891 386 KDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQDRIIGAHFFSP 449 (725)
Q Consensus 386 ~~aDlVIeavpe~~~---------~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~----~~~r~ig~h~~~p 449 (725)
++||+||.|||.+.+ ...++++.+.+.++++++|++. ||+++. .+.+.+. ...-.+.. +|
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e~~~~~d~~v~~---~P 158 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAEVAPNSGAKVVS---NP 158 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHHHSTTSCCEEEE---CC
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHHhCCCCCceEEe---Cc
Confidence 999999999987653 5778889999999999988764 455543 2222211 11112222 33
Q ss_pred CCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCe---eEEEcCCc-----chhhhhh---hHHHHHHHHHHH
Q 004891 450 AHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCT-----GFAVNRA---FFPYSQSARLLV 509 (725)
Q Consensus 450 ~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk~---~v~v~d~~-----Gfi~nRl---~~a~~~Ea~~l~ 509 (725)
....+.- .++.|. .++++.+.++++++.+++. ++++++.. +++.|-+ ..+++||+..+.
T Consensus 159 e~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 159 EFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322221 234442 3589999999999999875 57766522 3444543 357789998888
Q ss_pred Hc-CCCHHHHHHHH
Q 004891 510 SL-GVDVFRIDSAI 522 (725)
Q Consensus 510 ~~-Gv~~~dID~~~ 522 (725)
+. |++++++-.++
T Consensus 238 ~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 238 EQVGADVQEVSRGI 251 (446)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 76 99999998888
No 127
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.45 E-value=4.3e-13 Score=146.33 Aligned_cols=194 Identities=14% Similarity=0.106 Sum_probs=131.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHH--------HHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~--------i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
.|..|||+|.||.++|.+|+++|++|++||+++++++...+. +...+.+.+ ..+++.+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~------------~~g~l~~tt 79 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVL------------SSGKLKVST 79 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHH------------HTTCEEEES
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhc------------ccCceEEeC
Confidence 689999999999999999999999999999999998875431 011111111 124677777
Q ss_pred CcccccCCCEEEEeccCChH----------HHHHHHHHHHHhCCCCeEEEecCCCCChHHH---hccc-C-CC----CcE
Q 004891 381 DYSEFKDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLNIV---GEKT-S-SQ----DRI 441 (725)
Q Consensus 381 ~~~~l~~aDlVIeavpe~~~----------~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l---~~~~-~-~~----~r~ 441 (725)
+ +++||+||.|||.+.+ ......+.+.+.++++++|+. .||+++... ...+ . .. ..|
T Consensus 80 d---~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~~g~~~~~d~ 155 (431)
T 3ojo_A 80 T---PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIENLGFTIGEDI 155 (431)
T ss_dssp S---CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHTTTCCBTTTE
T ss_pred c---hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHHcCCCcCCCe
Confidence 6 4589999999997653 345666789999999998874 456555422 2211 1 11 112
Q ss_pred EEEecCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----Ccchhhhhhh---HHHHHH
Q 004891 442 IGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYSQS 504 (725)
Q Consensus 442 ig~h~~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-----~~Gfi~nRl~---~a~~~E 504 (725)
.-+ ++|....+.- .++.|. ++++.+.++++++.+++.++++++ ...++.|-++ .+++||
T Consensus 156 ~v~--~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE 231 (431)
T 3ojo_A 156 YLV--HCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANE 231 (431)
T ss_dssp EEE--ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEE--ECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 2443333221 355554 689999999999999988877754 1123334332 478899
Q ss_pred HHHHHHc-CCCHHHHHHHH
Q 004891 505 ARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 505 a~~l~~~-Gv~~~dID~~~ 522 (725)
+..+.+. |+++.++-.++
T Consensus 232 ~~~l~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 232 LTKICNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHH
Confidence 9888876 99999988888
No 128
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.45 E-value=2.5e-13 Score=151.43 Aligned_cols=202 Identities=15% Similarity=0.162 Sum_probs=137.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCC--CCHHHHHHh-----hcCccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGK--LTQDKANNA-----LKMLKG 378 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~--~~~~~~~~~-----~~~i~~ 378 (725)
|+||+|||+|.||.++|..|+++ |++|++||+++++++...+ +. +.....+.. ..++.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~------------g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNS------------PTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhC------------CCCCcCCCCHHHHHHHhhcCCEEE
Confidence 57999999999999999999999 8999999999998776421 11 000000001 124666
Q ss_pred ccCc-ccccCCCEEEEeccCChHH-------------HHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccCCC-Cc
Q 004891 379 VLDY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQ-DR 440 (725)
Q Consensus 379 ~~~~-~~l~~aDlVIeavpe~~~~-------------k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~~-~r 440 (725)
++++ +.+++||+||+|||++... ...+.+++.+.++++++|+. +|+.++. .+...+... ..
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~g~~~~l~~~l~~~~~~ 151 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTE-KSTVPVRAAESIRRIFDANTKP 151 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEE-CSCCCTTHHHHHHHHHHHTCCT
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEE-CCcCCchHHHHHHHHHHHhCCC
Confidence 6776 5678999999999865543 45677888888999998864 4444433 233322211 11
Q ss_pred EEEEe-cCCCCCCCCeee---------E-ecCCC--CCHHHHHHHHHHHHHc-CCeeEEEcC-----Ccchhhhhh---h
Q 004891 441 IIGAH-FFSPAHVMPLLE---------I-VRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRA---F 498 (725)
Q Consensus 441 ~ig~h-~~~p~~~~~lve---------i-i~~~~--t~~e~~~~~~~l~~~l-Gk~~v~v~d-----~~Gfi~nRl---~ 498 (725)
.+..+ .++|....+... + +.++. +++++.+.++++++.+ |+.++++++ ..+++.|.+ .
T Consensus 152 ~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 152 NLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp TCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 11111 235555544432 3 34433 3788999999999998 777888764 346777875 3
Q ss_pred HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 499 FPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 499 ~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
.+++||+..+.+. |++++++..++
T Consensus 232 ia~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 232 ISSINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 5788999988877 89999999998
No 129
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.45 E-value=9.4e-13 Score=145.53 Aligned_cols=203 Identities=15% Similarity=0.096 Sum_probs=135.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHH-HH--HhhcCcccccCcc-c
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK-AN--NALKMLKGVLDYS-E 384 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~-~~--~~~~~i~~~~~~~-~ 384 (725)
+||+|||+|.||.++|..|+++|++|++||+++++++...+... ...+.+ -.+ .. ...++++++++++ +
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~----~i~e~g---l~~~l~~~~~~~~l~~t~d~~ea 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTI----PIYEPG---LEKMIARNVKAGRLRFGTEIEQA 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCS----CCCSTT---HHHHHHHHHHTTSEEEESCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCC----cccCCC---HHHHHHhhcccCcEEEECCHHHH
Confidence 58999999999999999999999999999999998877543100 000000 000 00 0124677788874 5
Q ss_pred ccCCCEEEEeccCCh--------HHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccCC-------CCcEEEEec
Q 004891 385 FKDVDMVIEAVIESV--------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-------QDRIIGAHF 446 (725)
Q Consensus 385 l~~aDlVIeavpe~~--------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~-------~~r~ig~h~ 446 (725)
+++||+||+|||.+. ....++++++.+.++++++|++.+ ++++. .+.+.+.. ...+.-.
T Consensus 76 ~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~-- 152 (450)
T 3gg2_A 76 VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIA-- 152 (450)
T ss_dssp GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEE--
T ss_pred HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEE--
Confidence 899999999998764 267788899999999999887644 44443 22222210 0112111
Q ss_pred CCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCC--eeEEEcCC-----cchhhhhh---hHHHHHHHHH
Q 004891 447 FSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNC-----TGFAVNRA---FFPYSQSARL 507 (725)
Q Consensus 447 ~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk--~~v~v~d~-----~Gfi~nRl---~~a~~~Ea~~ 507 (725)
++|....+.. .++.|. .++++.+.++++++.+++ .++++.+. .+++.|-+ ..+++||+..
T Consensus 153 ~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 153 SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1444333321 234332 268999999999999987 36666553 23555643 3577899998
Q ss_pred HHHc-CCCHHHHHHHH
Q 004891 508 LVSL-GVDVFRIDSAI 522 (725)
Q Consensus 508 l~~~-Gv~~~dID~~~ 522 (725)
+.+. |++++++-.++
T Consensus 232 l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 232 LCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHTCCHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHH
Confidence 8877 99999999988
No 130
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.44 E-value=9.2e-13 Score=143.43 Aligned_cols=196 Identities=17% Similarity=0.211 Sum_probs=132.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHh----hcCcccccCc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY 382 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~----~~~i~~~~~~ 382 (725)
.++||+|||+|.||.++|..|++ |++|++||+++++++...+.. ..+.+...+.. ..++++++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~----------~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI----------SPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC----------CccccccHHHHHhhccCCeEEEcCH
Confidence 45799999999999999999998 999999999999988754310 01111111111 2367788887
Q ss_pred -ccccCCCEEEEeccCCh---------HHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccCCCCcEEEEecCCC
Q 004891 383 -SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSP 449 (725)
Q Consensus 383 -~~l~~aDlVIeavpe~~---------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~~~r~ig~h~~~p 449 (725)
+++++||+||+|||++. .....+.+.+.+ ++++++|+. .||+++. ++.+.+.. . ++.| +|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~--~v~~-sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--D--NVIF-SP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--C--CEEE-CC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--c--cEee-cC
Confidence 67899999999999864 356677788888 889988864 5555553 33333322 2 2222 66
Q ss_pred CCCCCe------e---eEecCCCCCHHHHHHHHHHHHH--cCC-eeEEEcC-----Ccchhhhhhh---HHHHHHHHHHH
Q 004891 450 AHVMPL------L---EIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGN-----CTGFAVNRAF---FPYSQSARLLV 509 (725)
Q Consensus 450 ~~~~~l------v---eii~~~~t~~e~~~~~~~l~~~--lGk-~~v~v~d-----~~Gfi~nRl~---~a~~~Ea~~l~ 509 (725)
....+. + .++.|. +++..+.+.+++.. ++. .++++.+ ...++.|-++ .+++||+..+.
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~la 254 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYA 254 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554432 1 344443 35677888999986 553 3566543 2234445442 57889998888
Q ss_pred Hc-CCCHHHHHHHH
Q 004891 510 SL-GVDVFRIDSAI 522 (725)
Q Consensus 510 ~~-Gv~~~dID~~~ 522 (725)
+. |+++.++-.++
T Consensus 255 e~~GiD~~~v~~~~ 268 (432)
T 3pid_A 255 ESQGLNSKQIIEGV 268 (432)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 76 99999988887
No 131
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.44 E-value=2.3e-12 Score=136.08 Aligned_cols=168 Identities=14% Similarity=0.184 Sum_probs=112.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc---c
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS---E 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~---~ 384 (725)
++||+|||+|.||..+|..|+++|++|++||++++.++...+. |.............+..+++.+ .
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~-----------g~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN-----------GLIADFNGEEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-----------CEEEEETTEEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC-----------CEEEEeCCCeeEecceeecchhhccc
Confidence 4689999999999999999999999999999999887664321 1000000000001222223222 3
Q ss_pred ccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhcccCCCCcEE-EEecCCCCCCCC--------
Q 004891 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHVMP-------- 454 (725)
Q Consensus 385 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~r~i-g~h~~~p~~~~~-------- 454 (725)
++++|+||.|+| .....++++++.+.++++++|++.++++.. ..+.+.+. +.+++ |.+++..+..+|
T Consensus 72 ~~~~d~vi~~v~--~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~-~~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTK--AQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVP-KENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSC--HHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSC-GGGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEec--cccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcC-CccEEEEEeeeeeEEcCCCEEEEecC
Confidence 348999999999 455678889999999999999888877766 44555543 23677 444433222221
Q ss_pred -eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004891 455 -LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (725)
Q Consensus 455 -lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 489 (725)
.+.+.....++++..+.+.++++.+|..+++.++.
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~ 184 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNV 184 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhH
Confidence 12344444557899999999999999887777664
No 132
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.44 E-value=1.3e-12 Score=135.98 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=115.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
|+||+|||+|.||.++|..|++.|+ +|++||++++.++.+. +.|.. ...++++ +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-----------HCCCc-----------ccccCCHHHH
Confidence 4689999999999999999999999 9999999998876542 12211 0123444 56
Q ss_pred cc-CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCCCCcEEEEecCCCCC----------
Q 004891 385 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 451 (725)
Q Consensus 385 l~-~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~r~ig~h~~~p~~---------- 451 (725)
++ +||+||+|+| .....+++.++.+.++++++|++.+++.. ...+.+.+.. ++++.||+..+.
T Consensus 59 ~~~~aDvVilavp--~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSC--HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCC--HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 9999999999 55666888889888999998875444332 2334444432 488888865432
Q ss_pred --CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 452 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 452 --~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
.+..+.++++..++++.++.++++++.+|..++++++
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3445777787778999999999999999999888864
No 133
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.44 E-value=5.5e-13 Score=140.00 Aligned_cols=188 Identities=18% Similarity=0.205 Sum_probs=127.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
+||+|||+|.||..+|..|++.|++|++||+++++++...+ .| +..++++ +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 48999999999999999999999999999999988765431 12 2234444 45788
Q ss_pred CCEEEEeccCChHHHHHHH--HHHHHhCCCCeEEEecCCCCCh--HHHhcccCC-CCcEEEEecC-CCC-CCCCeeeEec
Q 004891 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFF-SPA-HVMPLLEIVR 460 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~--~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~~-~~r~ig~h~~-~p~-~~~~lveii~ 460 (725)
+|+||+|+|.+..++..++ +++.+.++++++|++.+++.+. ..+.+.+.. ...++....+ +|+ .....+.++.
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~ 141 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMV 141 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEe
Confidence 9999999996666555443 5677888999988766555442 345544432 2223322110 000 0011234444
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcC-Ccchhh---hhhh----HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAV---NRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~~Gfi~---nRl~----~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
+. +++.++.+.++++.+|..++++++ ..|... |+.+ ...++|++.+.+. |+++++++.++
T Consensus 142 ~~--~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 142 GG--DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp ES--CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CC--CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 43 689999999999999999888864 344432 3333 3567798887755 89999998887
No 134
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.43 E-value=9e-14 Score=145.84 Aligned_cols=181 Identities=19% Similarity=0.151 Sum_probs=124.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccCC
Q 004891 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~a 388 (725)
||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..+++. +.++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~~ 57 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-----------AG-------------EQVVSSPADVAEKA 57 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-----------TT-------------CEECSSHHHHHHHC
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeecCCHHHHHhcC
Confidence 7999999999999999999999999999999988765421 12 2334444 557889
Q ss_pred CEEEEeccCChHHHHHHHHH---HHHhCCCCeEEEecCCCCChHHHhc---ccCCCCcEEEEecCCCCCCC-------Ce
Q 004891 389 DMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVM-------PL 455 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~---l~~~~~~~~ii~s~tS~~~~~~l~~---~~~~~~r~ig~h~~~p~~~~-------~l 455 (725)
|+||+|+|.+..++. ++.+ +.+.++++++|++ +|++.+..... .+... +.+|++.|... +.
T Consensus 58 Dvvi~~vp~~~~~~~-v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~----g~~~~~~p~~~g~~~a~~~~ 131 (296)
T 2gf2_A 58 DRIITMLPTSINAIE-AYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM----GAVFMDAPVSGGVGAARSGN 131 (296)
T ss_dssp SEEEECCSSHHHHHH-HHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEESHHHHHHHTC
T ss_pred CEEEEeCCCHHHHHH-HHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEEcCCCCChhHHhcCc
Confidence 999999986655544 4444 3446788998888 78877764432 22211 22333322111 12
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-cch---hhhhhhH----HHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TGF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 456 veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~Gf---i~nRl~~----a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
+.++.+ .+++.++.++++++.+|+.++.+++. .|. ++|+.+. .+++|++.+.+. |+++++++.++
T Consensus 132 ~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 132 LTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp EEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 334444 36888999999999999998888652 222 2344432 467899887765 89999999988
No 135
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.43 E-value=1.4e-12 Score=135.43 Aligned_cols=155 Identities=17% Similarity=0.172 Sum_probs=115.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
+||+|||+|.||.++|..|.+.|++|++||++++.++.+. +.|.. ...+++++.+++|
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~~~~ 58 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-----------ERQLV-----------DEAGQDLSLLQTA 58 (279)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGGTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------hCCCC-----------ccccCCHHHhCCC
Confidence 3799999999999999999999999999999998876542 11211 0123444333899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCC------------CCCee
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLL 456 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~------------~~~lv 456 (725)
|+||+|+| ......++.++.+.++++++|++. ++.....+........++++.||..... .++.+
T Consensus 59 D~vi~av~--~~~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~ 135 (279)
T 2f1k_A 59 KIIFLCTP--IQLILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPY 135 (279)
T ss_dssp SEEEECSC--HHHHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEE
T ss_pred CEEEEECC--HHHHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcE
Confidence 99999999 567788899999989999988765 5555433332222223899999875221 22356
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
.+++++.++++..+.++++++.+|..++++++
T Consensus 136 ~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 167 (279)
T 2f1k_A 136 VLTPTEYTDPEQLACLRSVLEPLGVKIYLCTP 167 (279)
T ss_dssp EEEECTTCCHHHHHHHHHHHGGGTCEEEECCH
T ss_pred EEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 77777778999999999999999998888865
No 136
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.43 E-value=2.6e-13 Score=150.86 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHH
Q 004891 463 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLD 536 (725)
Q Consensus 463 ~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv--~~~dID~~~-~~~G~p~---Gpf~~~D 536 (725)
.+++++.+.+.++.+.+|+.++.+ .+|+|+||++.+++|||++++++|+ +++|||.+| .|+|||+ |||+++|
T Consensus 331 ~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~D 408 (463)
T 1zcj_A 331 KPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAA 408 (463)
T ss_dssp EECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHHH
Confidence 468999999988888888766543 4799999999999999999999997 599999999 9999998 9999999
Q ss_pred hhchHHHHHHHHHHHhhCCC--CCCCcHHHHHHHHcCC
Q 004891 537 LAGYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGR 572 (725)
Q Consensus 537 ~~Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~g~ 572 (725)
.+|+|.++.+++.+++.+++ ++.|+++|++|+++|+
T Consensus 409 ~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~ 446 (463)
T 1zcj_A 409 SVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 446 (463)
T ss_dssp HHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred HhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCC
Confidence 99999999999999999998 4559999999999986
No 137
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.42 E-value=2.3e-13 Score=142.62 Aligned_cols=183 Identities=17% Similarity=0.159 Sum_probs=126.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
++||+|||+|.||..+|..|++.|++|++|| ++++++...+ .| +...++. +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLS-----------LG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH-----------cC-------------CcccCCHHHHHh
Confidence 4689999999999999999999999999999 8877655321 12 2223444 5578
Q ss_pred CCCEEEEeccCChHHHHHHHH--HHHHhCCCCeEEEecCCCCC--hHHHhcccCCCCcEEEEecCCCCCC--------CC
Q 004891 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAHV--------MP 454 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~--~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~r~ig~h~~~p~~~--------~~ 454 (725)
+||+||+|+|.+..++..+.. ++.+.++++++|++.+++.+ ...+.+.+... +.||++.|.. +.
T Consensus 58 ~~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g~ 133 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREGT 133 (295)
T ss_dssp TCSEEEECCSSHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHTC
T ss_pred cCCEEEEECCCHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcCC
Confidence 999999999966655444332 67777888998887665533 23455444321 3454433321 13
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-Ccc----hhhhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~~G----fi~nRl---~~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
+..++.+ +++.++.+.++++.+|..++++++ ..+ ++.|.+ +...++|+..+.+. |++++++..++
T Consensus 134 ~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 134 LSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp EEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 3434444 689999999999999999888865 333 334543 23567899887766 89999998888
No 138
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.42 E-value=7.1e-13 Score=146.61 Aligned_cols=198 Identities=15% Similarity=0.105 Sum_probs=132.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHh------hcCcccccCc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY 382 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~------~~~i~~~~~~ 382 (725)
+||+|||+|.||.++|..|+++|++|++||+++++++...+. .-.+.....+.. .+++.+++++
T Consensus 1 mkI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~----------~~~i~e~~l~~~~~~~~~~g~l~~t~~~ 70 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQG----------KSPIVEPGLEALLQQGRQTGRLSGTTDF 70 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTT----------CCSSCCTTHHHHHHHHHHTTCEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCC----------CCCcCCCCHHHHHHhhcccCceEEeCCH
Confidence 379999999999999999999999999999999987765321 000000000100 2456777777
Q ss_pred -ccccCCCEEEEeccCChH--------HHHHHHHHHHHhCCC---CeEEEecCCCCChHH----HhcccCC--CCc----
Q 004891 383 -SEFKDVDMVIEAVIESVP--------LKQKIFSELEKACPP---HCILATNTSTIDLNI----VGEKTSS--QDR---- 440 (725)
Q Consensus 383 -~~l~~aDlVIeavpe~~~--------~k~~v~~~l~~~~~~---~~ii~s~tS~~~~~~----l~~~~~~--~~r---- 440 (725)
+.+++||+||+|||.+.. ...++++++.+.+++ +++|+. .|+.++.. +...+.. ..+
T Consensus 71 ~~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~-~Stv~~g~t~~~l~~~l~~~~g~~~~~~ 149 (436)
T 1mv8_A 71 KKAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV-RSTVLPGTVNNVVIPLIEDCSGKKAGVD 149 (436)
T ss_dssp HHHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE-CSCCCTTHHHHTHHHHHHHHHSCCBTTT
T ss_pred HHHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE-eCCcCCCchHHHHHHHHHHhcCcccCCc
Confidence 468999999999987654 244567888888888 888764 34444322 2222211 111
Q ss_pred -EEEEecCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----Ccchhhhhhh---HHHH
Q 004891 441 -IIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYS 502 (725)
Q Consensus 441 -~ig~h~~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-----~~Gfi~nRl~---~a~~ 502 (725)
.+. ++|....+.. .++.|. +++++.+.+.++++.+|.. +++.+ ..+++.|.+. .+++
T Consensus 150 ~~v~---~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~ae~~Kl~~N~~~a~~ia~~ 224 (436)
T 1mv8_A 150 FGVG---TNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAP-IIRKTVEVAEMIKYTCNVWHAAKVTFA 224 (436)
T ss_dssp BEEE---ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEE---ECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCC-EEcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 122 2444444322 244444 3689999999999999984 44443 3356667653 5788
Q ss_pred HHHHHHHHc-CCCHHHHHHHH
Q 004891 503 QSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 503 ~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
||+..+.+. |++++++..++
T Consensus 225 nE~~~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 225 NEIGNIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHh
Confidence 999988876 89999999988
No 139
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.40 E-value=3.3e-13 Score=135.19 Aligned_cols=154 Identities=18% Similarity=0.237 Sum_probs=112.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEE-EeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~-~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (725)
++|+||+|||+|.||.++|..|+++|++|++ +|++++++++..+.+ + .....++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----------g------------~~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----------G------------ASVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----------T------------TTEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----------C------------CCcccChHHH
Confidence 4578999999999999999999999999999 999999877643211 1 1112334466
Q ss_pred ccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--------------ChHHHhcccCCCCcEEEEecCCCC
Q 004891 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--------------DLNIVGEKTSSQDRIIGAHFFSPA 450 (725)
Q Consensus 385 l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--------------~~~~l~~~~~~~~r~ig~h~~~p~ 450 (725)
++++|+||+|+| .....+++.++.+ + ++++|++.++++ ....+++.+. ..+++..+++.|.
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 889999999998 6777788887766 4 577888888776 3445566554 4567776654443
Q ss_pred CCCC---------eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 451 HVMP---------LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 451 ~~~~---------lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
.... ...++.+. ++++.+.++++++.+|..++.+++
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g~--~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSGN--HSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEES--CHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHhhhCcccCCCCeeEEEeCC--CHHHHHHHHHHHHHhCCCeEeeCC
Confidence 2221 22333443 699999999999999999999876
No 140
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.40 E-value=1.1e-12 Score=134.81 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=110.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC----CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G----~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
.+||+|||+|.||+++|..|+++| ++|++||+++++ .| +..+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~ 53 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNE 53 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHH
Confidence 358999999999999999999999 799999999764 01 2223344
Q ss_pred ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCCCCCCeee-EecC
Q 004891 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE-IVRT 461 (725)
Q Consensus 383 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~~~~~lve-ii~~ 461 (725)
+.+++||+||+|+| .....+++.++.+.+ ++++|++.++++....+.+.+....+++...+..|......+. ++++
T Consensus 54 ~~~~~~D~vi~~v~--~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 130 (262)
T 2rcy_A 54 ELARHCDIIVCAVK--PDIAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSN 130 (262)
T ss_dssp HHHHHCSEEEECSC--TTTHHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHhcCCEEEEEeC--HHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeC
Confidence 55788999999999 445678888888888 5677778889998887777665433444333344444444344 4567
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 462 ERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
+.++++.++.++++++.+|+ ++++++
T Consensus 131 ~~~~~~~~~~~~~ll~~~G~-~~~~~~ 156 (262)
T 2rcy_A 131 KNVNSTDKKYVNDIFNSCGI-IHEIKE 156 (262)
T ss_dssp TTCCHHHHHHHHHHHHTSEE-EEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence 77899999999999999997 777764
No 141
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.40 E-value=1.3e-12 Score=145.84 Aligned_cols=201 Identities=13% Similarity=0.144 Sum_probs=134.5
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCC--CHHHHHHh-----hcCc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL--TQDKANNA-----LKML 376 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~--~~~~~~~~-----~~~i 376 (725)
++++||+|||+|.||.++|..|+++ |++|++||+++++++...+ +.. ........ .+++
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~------------g~~~i~e~gl~~~~~~~~~~~l 74 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS------------DKLPIYEPGLDEIVFAARGRNL 74 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC------------CCCCcCCCCHHHHHHHhhcCCE
Confidence 3467999999999999999999998 7999999999998776532 111 00000111 1346
Q ss_pred ccccCc-ccccCCCEEEEeccCCh-------------HHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccCC--
Q 004891 377 KGVLDY-SEFKDVDMVIEAVIESV-------------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-- 437 (725)
Q Consensus 377 ~~~~~~-~~l~~aDlVIeavpe~~-------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~-- 437 (725)
.+++++ +.+++||+||+|||.+. .....+++.+.++++++++|+. .||+++. .+...+..
T Consensus 75 ~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~gt~~~l~~~l~~~~ 153 (481)
T 2o3j_A 75 FFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE-KSTVPVKAAESIGCILREAQ 153 (481)
T ss_dssp EEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHT
T ss_pred EEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE-CCCCCCCHHHHHHHHHHHhh
Confidence 677776 67889999999998654 2467788899999999998874 3444433 22222211
Q ss_pred C----Cc-EEEEecCCCCCCCCee---------eEecCCCCC---HHHHHHHHHHHHHcCC-eeEEEcC-----Ccchhh
Q 004891 438 Q----DR-IIGAHFFSPAHVMPLL---------EIVRTERTS---AQVILDLMTVGKIIKK-VPVVVGN-----CTGFAV 494 (725)
Q Consensus 438 ~----~r-~ig~h~~~p~~~~~lv---------eii~~~~t~---~e~~~~~~~l~~~lGk-~~v~v~d-----~~Gfi~ 494 (725)
. .. ++..+| ....+.. .++-|...+ +++++.++++++.+++ .++++.+ ..+++.
T Consensus 154 ~~~~~~d~~v~~~P---e~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~ 230 (481)
T 2o3j_A 154 KNNENLKFQVLSNP---EFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVA 230 (481)
T ss_dssp C----CCEEEEECC---CCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHH
T ss_pred CcCcCCceEEEeCc---ccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHH
Confidence 1 11 233333 3222221 244332222 3688999999999996 6777653 335666
Q ss_pred hhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 495 NRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 495 nRl---~~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
|.+ ..+++||+..+.+. |++++++..++
T Consensus 231 N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 231 NAFLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 754 46788999988877 99999999888
No 142
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.38 E-value=2.2e-13 Score=150.72 Aligned_cols=192 Identities=13% Similarity=0.046 Sum_probs=129.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc-
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE- 384 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~- 384 (725)
.++||+|||+|.||.+||.+|+++|++|++||+++++++...+ .+.. -..+..++++ +.
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~--------g~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-----------NEAK--------GTKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-----------TTTT--------TSSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----------cccC--------CCceeccCCHHHHH
Confidence 4578999999999999999999999999999999998776532 1100 0123333444 22
Q ss_pred --ccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC---CCCCee
Q 004891 385 --FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (725)
Q Consensus 385 --l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~---~~~~lv 456 (725)
++++|+||.|||.+..+ ..++.++.+.++++.+|++.+++.+.. .+.+.+. ...+|++......+ ..++
T Consensus 64 ~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-- 140 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQAV-DDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-- 140 (484)
T ss_dssp HTBCSSCEEEECSCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--
T ss_pred hhccCCCEEEEecCChHHH-HHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC--
Confidence 34699999999966554 456789999999999998776666533 3333222 23345554221111 1122
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCee-------EEEcC-Ccc----hhhhhhh---HHHHHHHHHHHHc--CCCHHHHH
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~-------v~v~d-~~G----fi~nRl~---~a~~~Ea~~l~~~--Gv~~~dID 519 (725)
-++.|. ++++++.++++++.+|..+ +++++ ..| .+-|-+. ...++|++.+++. |++++++-
T Consensus 141 ~im~GG--~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~ 218 (484)
T 4gwg_A 141 SLMPGG--NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMA 218 (484)
T ss_dssp EEEEEE--CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eeecCC--CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 244443 5899999999999999877 66665 222 2334442 3556799998876 88999988
Q ss_pred HHH
Q 004891 520 SAI 522 (725)
Q Consensus 520 ~~~ 522 (725)
.++
T Consensus 219 ~v~ 221 (484)
T 4gwg_A 219 QAF 221 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 886
No 143
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.38 E-value=3.5e-12 Score=136.73 Aligned_cols=171 Identities=13% Similarity=0.063 Sum_probs=115.2
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 304 ~~~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
|.+.++||+|||+|.||+++|..|+++|++|++||++++.++...+...+ .... .+. ....++..++++
T Consensus 25 m~~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~--~~~l-~g~-------~l~~~i~~t~d~~ 94 (356)
T 3k96_A 25 MEPFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVN--NRYL-PNY-------PFPETLKAYCDLK 94 (356)
T ss_dssp --CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSB--TTTB-TTC-------CCCTTEEEESCHH
T ss_pred ccccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC--cccC-CCC-------ccCCCeEEECCHH
Confidence 33445789999999999999999999999999999999887765431000 0000 010 011345666777
Q ss_pred ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH------HHhcccCCCCcEEEEecCCCCC-----
Q 004891 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRIIGAHFFSPAH----- 451 (725)
Q Consensus 383 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~------~l~~~~~~~~r~ig~h~~~p~~----- 451 (725)
+++++||+||+||| ....+++++++.++++++++|++.++++... .+.+.+.. ..+... ..|..
T Consensus 95 ea~~~aDvVilaVp--~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~vl--sgP~~a~ev~ 169 (356)
T 3k96_A 95 ASLEGVTDILIVVP--SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAVI--SGPSLATEVA 169 (356)
T ss_dssp HHHTTCCEEEECCC--HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEEE--ESSCCHHHHH
T ss_pred HHHhcCCEEEECCC--HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEEE--ECccHHHHHH
Confidence 57899999999999 6688899999999999999999888877764 23333331 122111 12221
Q ss_pred -CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc
Q 004891 452 -VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (725)
Q Consensus 452 -~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G 491 (725)
..+..-++.+ .+++..+.+++++...+..+++..|..|
T Consensus 170 ~g~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g 208 (356)
T 3k96_A 170 ANLPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIG 208 (356)
T ss_dssp TTCCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHH
T ss_pred cCCCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHH
Confidence 1122222222 3688999999999998888887777554
No 144
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.37 E-value=1.6e-13 Score=142.88 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhC-CCCCCCHHH
Q 004891 623 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPSRFL 701 (725)
Q Consensus 623 ~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~-~~~~p~~~l 701 (725)
.+.||++.++++||+.++++|++ ++++||.++..|+|+|+ |||+++|.+|+|++++++++ ..+ +++.|++++
T Consensus 191 ~i~nr~~~~~~~ea~~l~~~g~~-~~~~id~~~~~~~g~~~---Gp~~~~D~~Gld~~~~~~~~---~~~~~~~~~~~~~ 263 (283)
T 4e12_A 191 YVLNSLLVPLLDAAAELLVDGIA-DPETIDKTWRIGTGAPK---GPFEIFDIVGLTTAYNISSV---SGPKQREFAAYLK 263 (283)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSC-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHT---SCHHHHHHHHHHH
T ss_pred EEehHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhccCCCc---CHHHHHHhccHHHHHHHHhc---cccCcccCchHHH
Confidence 58899999999999999999999 99999999999999999 99999999999999999884 222 257788899
Q ss_pred HHHH-------HcCCCCCCC
Q 004891 702 EERA-------TKGIPLSAP 714 (725)
Q Consensus 702 ~~~~-------~~g~gf~~~ 714 (725)
++|+ |+|+|||+|
T Consensus 264 ~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 264 ENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHCCCCceeCCeEeecC
Confidence 9998 789999998
No 145
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.36 E-value=1.4e-12 Score=145.75 Aligned_cols=191 Identities=13% Similarity=0.075 Sum_probs=131.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
..+|+|||+|.||.+||..|+++|++|++||+++++++...+. . ..+ ..+..++++ +.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~-------~-~~~-----------~gi~~~~s~~e~v~ 70 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLAN-------E-AKG-----------KSIIGATSIEDFIS 70 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHT-------T-TTT-----------SSEECCSSHHHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHcc-------c-ccC-----------CCeEEeCCHHHHHh
Confidence 3589999999999999999999999999999999987765320 0 000 124445555 3344
Q ss_pred C---CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCCC---CCCeee
Q 004891 387 D---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLE 457 (725)
Q Consensus 387 ~---aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~~---~~~lve 457 (725)
+ ||+||+|||.+..+ +++++++.+.++++++|++.+++.+.. .+.+.+. ...+|+++.....+. .++ .
T Consensus 71 ~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~--~ 147 (497)
T 2p4q_A 71 KLKRPRKVMLLVKAGAPV-DALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP--S 147 (497)
T ss_dssp TSCSSCEEEECCCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--E
T ss_pred cCCCCCEEEEEcCChHHH-HHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC--e
Confidence 4 99999999965554 456688999999999988766665432 3444332 223455543222111 112 2
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe------eEEEc-CCcch----hhhhhh---HHHHHHHHHHHHc--CCCHHHHHHH
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKV------PVVVG-NCTGF----AVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~------~v~v~-d~~Gf----i~nRl~---~a~~~Ea~~l~~~--Gv~~~dID~~ 521 (725)
++.+. ++++++.++++++.+|+. +++++ ...|. +.|.+. ...+.|++.+++. |++++++..+
T Consensus 148 im~gg--~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~ 225 (497)
T 2p4q_A 148 LMPGG--SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDV 225 (497)
T ss_dssp EEEEE--CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHH
Confidence 44443 588999999999999987 56665 33443 346664 4566799988876 8999999888
Q ss_pred H
Q 004891 522 I 522 (725)
Q Consensus 522 ~ 522 (725)
+
T Consensus 226 ~ 226 (497)
T 2p4q_A 226 F 226 (497)
T ss_dssp H
T ss_pred H
Confidence 7
No 146
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.36 E-value=2.9e-12 Score=142.75 Aligned_cols=193 Identities=14% Similarity=0.063 Sum_probs=130.8
Q ss_pred CCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-c
Q 004891 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (725)
Q Consensus 305 ~~~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (725)
.++-++|+|||+|.||.+||..|+++|++|++||+++++++...+.. . + ..+..++++ +
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~--------~-~-----------~gi~~~~s~~e 71 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAEN--------P-G-----------KKLVPYYTVKE 71 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHS--------T-T-----------SCEEECSSHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhC--------C-C-----------CCeEEeCCHHH
Confidence 34557899999999999999999999999999999999877654211 0 0 124445555 4
Q ss_pred cccC---CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCC---CCCC
Q 004891 384 EFKD---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMP 454 (725)
Q Consensus 384 ~l~~---aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~---~~~~ 454 (725)
.+++ ||+||.|||.+..+ .++++++.+.++++++|++.+++.+.. .+.+.+. ...+++++.....+ ..++
T Consensus 72 ~v~~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~ 150 (480)
T 2zyd_A 72 FVESLETPRRILLMVKAGAGT-DAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP 150 (480)
T ss_dssp HHHTBCSSCEEEECSCSSSHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC
T ss_pred HHhCCCCCCEEEEECCCHHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC
Confidence 4454 99999999965444 466788999999999988776666442 3444332 23345544221111 1122
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcC-Ccc----hhhhhhh---HHHHHHHHHHHHc--CCCHHH
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFR 517 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~-------~v~v~d-~~G----fi~nRl~---~a~~~Ea~~l~~~--Gv~~~d 517 (725)
.++.+. +++.++.++++++.+|.. ++++++ ..| ++.|.+. ...+.|++.+... |+++++
T Consensus 151 --~i~~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~ 226 (480)
T 2zyd_A 151 --SIMPGG--QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEE 226 (480)
T ss_dssp --EEEEES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred --eEEecC--CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 244443 589999999999999987 566654 222 2345553 4556799888876 999999
Q ss_pred HHHHH
Q 004891 518 IDSAI 522 (725)
Q Consensus 518 ID~~~ 522 (725)
+..++
T Consensus 227 ~~~l~ 231 (480)
T 2zyd_A 227 LAQTF 231 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 147
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.35 E-value=5.6e-12 Score=140.60 Aligned_cols=190 Identities=13% Similarity=0.029 Sum_probs=129.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+... + ..+..++++ +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ---------D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---------T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc---------C-----------CCeEEeCCHHHHHh
Confidence 468999999999999999999999999999999998776543110 0 123444555 3344
Q ss_pred ---CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhcccCC-CCcEEEEecCCCC---CCCCeee
Q 004891 387 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLE 457 (725)
Q Consensus 387 ---~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~~-~~r~ig~h~~~p~---~~~~lve 457 (725)
++|+||+|||.+..+ ..+++++.+.++++++|++.+++.+. ..+.+.+.. ..+++++....++ ..++ .
T Consensus 65 ~l~~aDvVilavp~~~~v-~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~ 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAAT-DATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP--S 141 (474)
T ss_dssp TBCSSCEEEECCCTTHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC--C
T ss_pred hccCCCEEEEEccCchHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC--e
Confidence 499999999965544 45668898999999988876666543 345444432 2345544222111 1112 1
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe--------eEEEcC-Ccc----hhhhhhh---HHHHHHHHHHHHc--CCCHHHHH
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~--------~v~v~d-~~G----fi~nRl~---~a~~~Ea~~l~~~--Gv~~~dID 519 (725)
++++. +++.++.++++++.+|.. +.++++ ..| ++.|.+. ...+.|++.+.+. |++++++.
T Consensus 142 i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 34443 689999999999999987 455554 223 3456553 4566799988875 89999998
Q ss_pred HHH
Q 004891 520 SAI 522 (725)
Q Consensus 520 ~~~ 522 (725)
.++
T Consensus 220 ~l~ 222 (474)
T 2iz1_A 220 AIF 222 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 148
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.35 E-value=2.3e-12 Score=134.48 Aligned_cols=184 Identities=15% Similarity=0.064 Sum_probs=122.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
|+||+|||+|.||..+|..|++ |++|++||+++++++...+. | +..++..+.+++
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~ 55 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-----------F-------------GSEAVPLERVAE 55 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-----------H-------------CCEECCGGGGGG
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-----------C-------------CcccCHHHHHhC
Confidence 3589999999999999999999 99999999999887664321 1 111222255789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCCC-CcEEEEecCCC-CC---CCCeeeEec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQ-DRIIGAHFFSP-AH---VMPLLEIVR 460 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~-~r~ig~h~~~p-~~---~~~lveii~ 460 (725)
+|+||+|+|.+..++ .+++++.+.++++++|++.++..+ ...+.+.+... ..++.. |..+ +. .+.+..++.
T Consensus 56 ~D~vi~~v~~~~~~~-~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~ 133 (289)
T 2cvz_A 56 ARVIFTCLPTTREVY-EVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG 133 (289)
T ss_dssp CSEEEECCSSHHHHH-HHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE
T ss_pred CCEEEEeCCChHHHH-HHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC
Confidence 999999999655444 466888888889998875433322 23444444322 234433 2111 10 112222333
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCC-cc----hhhhhh---hHHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGNC-TG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-~G----fi~nRl---~~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
+ +++.++.+.+++ .+|..++++++. .+ ++.|.+ +...++|+..+.+. |++++++..++
T Consensus 134 ~---~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 134 G---PEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp S---CHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred C---CHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 2 689999999999 999988888653 22 233543 34667798887765 89999988887
No 149
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.34 E-value=5.3e-12 Score=132.30 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=101.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEEE
Q 004891 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (725)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (725)
++++++..+...+.++.++.. .+-+|.|.-.++++. |.+-.+. .........+ .++..+++|+|++|
T Consensus 139 G~~~~~~~~Ka~r~~~~A~~~-~~PlI~lvdt~Ga~~-g~~ae~~----------g~~~~~a~~l-~al~~~~vPvIavV 205 (327)
T 2f9i_A 139 GMAHPEGYRKALRLMKQAEKF-NRPIFTFIDTKGAYP-GKAAEER----------GQSESIATNL-IEMASLKVPVIAIV 205 (327)
T ss_dssp GCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEESCSCC-CHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhc-CCCEEEEEeCCCCCc-chhhhhh----------hhHHHHHHHH-HHHHhCCCCEEEEE
Confidence 689999999999999988866 455666643333222 2111100 1122334555 56899999999999
Q ss_pred cccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecC
Q 004891 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (725)
Q Consensus 106 ~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~ 185 (725)
+|.|.|||+.++++||++||+++++|++ +.|.++++..+.+..+...+.++ ..++|++|+++|+||+|+|
T Consensus 206 ~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 206 IGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp EEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred ECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEec
Confidence 9999999999999999999999999986 34555555544445555777776 7799999999999999998
Q ss_pred c
Q 004891 186 S 186 (725)
Q Consensus 186 ~ 186 (725)
.
T Consensus 276 e 276 (327)
T 2f9i_A 276 E 276 (327)
T ss_dssp C
T ss_pred C
Confidence 3
No 150
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.34 E-value=3.2e-12 Score=134.07 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=106.1
Q ss_pred CcceEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 307 GVRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 307 ~~~kIaVIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
.++||+||| +|.||.++|..|+++|++|++||++++. +..+.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~ 63 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESIL 63 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHh
Confidence 357899999 9999999999999999999999998652 001346
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCCCCcEEEEecCCCCC----CCCeeeEe
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIV 459 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~~r~ig~h~~~p~~----~~~lveii 459 (725)
++||+||+||| .....+++.++.+.++++++|++.+|+.. +..+.... +.++++.||..++. .+..+.++
T Consensus 64 ~~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~ 139 (298)
T 2pv7_A 64 ANADVVIVSVP--INLTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRC 139 (298)
T ss_dssp TTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEE
T ss_pred cCCCEEEEeCC--HHHHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEe
Confidence 78999999999 55578899999998999998876544322 23333332 46899999965442 23345555
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
++. +++.++.+.++++.+|..++++.+
T Consensus 140 ~~~--~~~~~~~v~~l~~~~G~~~~~~~~ 166 (298)
T 2pv7_A 140 DGR--FPERYEWLLEQIQIWGAKIYQTNA 166 (298)
T ss_dssp EEE--CGGGTHHHHHHHHHTTCEEEECCH
T ss_pred cCC--CHHHHHHHHHHHHHcCCEEEECCH
Confidence 554 688899999999999998888753
No 151
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.32 E-value=4.1e-12 Score=135.53 Aligned_cols=182 Identities=16% Similarity=0.088 Sum_probs=122.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHH-HHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~-~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.+||+|||+|.||.++|..|.+.|++|+++|++++. .+.+. +.| +..+ +. +.+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~-----------~~G-------------~~~~-~~~e~~ 70 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-----------AHG-------------LKVA-DVKTAV 70 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-----------HTT-------------CEEE-CHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH-----------HCC-------------CEEc-cHHHHH
Confidence 358999999999999999999999999999999765 33221 112 1223 33 567
Q ss_pred cCCCEEEEeccCChHHHHHHHH-HHHHhCCCCeEEEecCCCCChHHHhccc-CCCCcEEEEecCCCCCC---------CC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MP 454 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~-~l~~~~~~~~ii~s~tS~~~~~~l~~~~-~~~~r~ig~h~~~p~~~---------~~ 454 (725)
++||+||+|+| ......++. ++.+.++++++|++. +++.+ .+.... .....+++.||..|... +.
T Consensus 71 ~~aDvVilavp--~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~ 146 (338)
T 1np3_A 71 AAADVVMILTP--DEFQGRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGI 146 (338)
T ss_dssp HTCSEEEECSC--HHHHHHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCC
T ss_pred hcCCEEEEeCC--cHHHHHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCC
Confidence 89999999999 555578888 898899999998865 44444 333322 12235899999777541 22
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCC-e--eEEEc----C-CcchhhhhhhH----HHHHHHH-HHHHcCCCHHHH
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAFF----PYSQSAR-LLVSLGVDVFRI 518 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk-~--~v~v~----d-~~Gfi~nRl~~----a~~~Ea~-~l~~~Gv~~~dI 518 (725)
.+-++++..+++++.+.+..+++.+|. . ++.+. + ...++.+..+. .++..++ .+++.|+++++.
T Consensus 147 ~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 147 PDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp CEEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 333566667788999999999999998 4 55552 1 22444343332 2222222 345678887654
No 152
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.30 E-value=2.2e-11 Score=132.61 Aligned_cols=204 Identities=17% Similarity=0.163 Sum_probs=132.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHH--------HHHHHHhhHHcCCCCHHHHHHhhcCccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKG 378 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~--------i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (725)
.|.+|+|||+|.+|.++|..|++.|++|+++|+|+++++...+. +...+.+.++. +++++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~------------g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSS------------GRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHT------------TCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHc------------CCeeE
Confidence 57899999999999999999999999999999999998875432 12222222222 46788
Q ss_pred ccCc-ccccCCCEEEEeccC--------ChHHHHHHHHHHHHhCC---CCeEEEecCCCCChHH---Hh-----cccCCC
Q 004891 379 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLNI---VG-----EKTSSQ 438 (725)
Q Consensus 379 ~~~~-~~l~~aDlVIeavpe--------~~~~k~~v~~~l~~~~~---~~~ii~s~tS~~~~~~---l~-----~~~~~~ 438 (725)
+++. +++++||++|.|||. |+.......+.|.++++ ++++|+. -||.++.. +. +.....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~~~ 166 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAGGV 166 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTTTC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCCCC
Confidence 8887 568999999999974 44556666777777664 4556553 34444321 11 111111
Q ss_pred CcEEEEecCCCCCCCCe---------eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc----CCcchhhhhhh---HHHH
Q 004891 439 DRIIGAHFFSPAHVMPL---------LEIVRTERTSAQVILDLMTVGKIIKKVPVVVG----NCTGFAVNRAF---FPYS 502 (725)
Q Consensus 439 ~r~ig~h~~~p~~~~~l---------veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~----d~~Gfi~nRl~---~a~~ 502 (725)
.-.++. +|-...+. --++.|. +++++.+.+..+++.+....+++. |...++.|-+. .+++
T Consensus 167 ~f~v~~---~PErl~eG~a~~d~~~~~riViG~-~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~ 242 (444)
T 3vtf_A 167 KFSVAS---NPEFLREGSALEDFFKPDRIVIGA-GDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFA 242 (444)
T ss_dssp CCEEEE---CCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cceeec---CcccccCCccccccccCCcEEEcC-CCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHH
Confidence 112222 34333221 1133332 367888999999998876655543 33345666443 5889
Q ss_pred HHHHHHHHc-CCCHHHHHHHH-H--hcCC
Q 004891 503 QSARLLVSL-GVDVFRIDSAI-R--SFGL 527 (725)
Q Consensus 503 ~Ea~~l~~~-Gv~~~dID~~~-~--~~G~ 527 (725)
||...+.+. |+++.+|-.++ . .+|+
T Consensus 243 NEla~ice~~GiDv~eV~~a~~~d~rig~ 271 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTYRVFEAVGLDKRIGR 271 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTSTTSCS
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCCCCCC
Confidence 998877766 99999988887 3 4554
No 153
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.30 E-value=1.4e-11 Score=126.87 Aligned_cols=173 Identities=14% Similarity=0.092 Sum_probs=113.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
||+|||+|.||.++|..|+++|++|++||+ +++.++...+ .| +. ++. +.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~-----------~g-------------~~--~~~~~~~~ 55 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----------VG-------------VT--ETSEEDVY 55 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----------HT-------------CE--ECCHHHHH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHH-----------CC-------------Cc--CCHHHHHh
Confidence 799999999999999999999999999999 6666554321 12 11 233 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh---HHHhcccCCCCcEEEEecCCCCC---CCCeeeEec
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIVR 460 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~---~~l~~~~~~~~r~ig~h~~~p~~---~~~lveii~ 460 (725)
+||+||+|+|.+...+. +.++.+.+++ +|++. |+..+ ..+.+.+.... ++..+++.++. .+.. .++.
T Consensus 56 ~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~~ 128 (264)
T 1i36_A 56 SCPVVISAVTPGVALGA--ARRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIAS 128 (264)
T ss_dssp TSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEEE
T ss_pred cCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEec
Confidence 99999999996655433 3567777766 55443 44443 35555555443 66766665443 2223 3444
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCcch-----hhhhhh----HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf-----i~nRl~----~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
++. . +.+++ ++.+|+.++++++.+|. +.++.+ ...++|++.+.+. |++++.+ ..+
T Consensus 129 g~~--~---~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~-~~~ 193 (264)
T 1i36_A 129 GRD--A---EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVL-EML 193 (264)
T ss_dssp STT--H---HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHH
T ss_pred CCc--H---HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHH
Confidence 542 2 67788 99999998888864553 233332 4556788887755 8987644 444
No 154
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.30 E-value=9.3e-12 Score=130.83 Aligned_cols=138 Identities=14% Similarity=0.038 Sum_probs=106.6
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEEE
Q 004891 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (725)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (725)
++++++..+...++++.++.. .+-+|.|.-.++++. |....+. .........+ .++..+++|+|++|
T Consensus 153 G~~~~~~~~Ka~r~~~~A~~~-~lPlI~lvDt~Ga~~-g~~aE~~----------g~~~~~a~~l-~al~~~~vPvIavV 219 (339)
T 2f9y_A 153 GMPAPEGYRKALRLMQMAERF-KMPIITFIDTPGAYP-GVGAEER----------GQSEAIARNL-REMSRLGVPVVCTV 219 (339)
T ss_dssp GCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEESCSCC-SHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhc-CCCEEEEEeCCCCcc-chHHHHH----------HHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 689999999999999988765 455666643333322 2111110 1122334555 56899999999999
Q ss_pred cccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHHHHcCCcceecC
Q 004891 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (725)
Q Consensus 106 ~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~~Glv~~vv~ 185 (725)
+|.|.|||+.++++||++||.++++|++ +.|.++++.++++..+...|.++ ..++|++|+++|+||+|+|
T Consensus 220 ~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ 289 (339)
T 2f9y_A 220 IGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP 289 (339)
T ss_dssp EEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred eCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEec
Confidence 9999999999999999999999999997 45777777777777787888887 6799999999999999998
Q ss_pred c
Q 004891 186 S 186 (725)
Q Consensus 186 ~ 186 (725)
.
T Consensus 290 e 290 (339)
T 2f9y_A 290 E 290 (339)
T ss_dssp C
T ss_pred C
Confidence 3
No 155
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.27 E-value=1.3e-11 Score=122.52 Aligned_cols=157 Identities=15% Similarity=0.162 Sum_probs=112.8
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
+||+||| +|.||..++..|++.|++|+++|+++++.+...+.+.. .+.. ..+.. ++. +.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~ 63 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAE 63 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHh
Confidence 3799999 99999999999999999999999999887665432211 1110 11222 233 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--------------hHHHhcccCCCCcEEEEecCCCC--
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPA-- 450 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--------------~~~l~~~~~~~~r~ig~h~~~p~-- 450 (725)
+||+||.|+| .....+++.++.+.++ ++++++.++++. ..++++.+. ..+++..|+..|.
T Consensus 64 ~~D~Vi~~~~--~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~v~~~~~~~~~~ 139 (212)
T 1jay_A 64 ACDIAVLTIP--WEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE-SEKVVSALHTIPAAR 139 (212)
T ss_dssp HCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT-CSCEEECCTTCCHHH
T ss_pred cCCEEEEeCC--hhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC-CCeEEEEccchHHHH
Confidence 8999999999 4445678888777664 888888888665 466666654 3578777644332
Q ss_pred -----CCCCeeeEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcC
Q 004891 451 -----HVMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 488 (725)
Q Consensus 451 -----~~~~lveii~~~~t~~e~~~~~~~l~~~l-Gk~~v~v~d 488 (725)
....+..+++++ +++.++.+.++++.+ |+.++++++
T Consensus 140 ~~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 140 FANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HHCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hhCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 112245566665 689999999999999 999999876
No 156
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.25 E-value=3e-11 Score=134.71 Aligned_cols=194 Identities=12% Similarity=0.059 Sum_probs=128.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc-
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK- 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~- 386 (725)
+||+|||+|.||..+|..|+++|++|++||+++++++...+.. |... . ...+..++++ +.++
T Consensus 2 MkIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~----------g~~~-~-----~~~i~~~~~~~e~v~~ 65 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN----------ASAP-F-----AGNLKAFETMEAFAAS 65 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT----------TTST-T-----GGGEEECSCHHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------CCCC-C-----CCCeEEECCHHHHHhc
Confidence 3799999999999999999999999999999999877654310 1000 0 0124445555 3333
Q ss_pred --CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhcccC-CCCcEEEEecCCCCC---CCCeeeE
Q 004891 387 --DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (725)
Q Consensus 387 --~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~-~~~r~ig~h~~~p~~---~~~lvei 458 (725)
++|+||+|||....+ ..+++++.+.++++++|++.+++.+. ..+.+.+. ....+++.....++. .++ .+
T Consensus 66 l~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~i 142 (478)
T 1pgj_A 66 LKKPRKALILVQAGAAT-DSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP--AF 142 (478)
T ss_dssp BCSSCEEEECCCCSHHH-HHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEecCChHHH-HHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC--eE
Confidence 599999999965444 45668888999999988876666543 24444443 233455443222111 122 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcC-Ccc----hhhhhhh---HHHHHHHHHHHHc-CCCHHHHHHHH
Q 004891 459 VRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 522 (725)
Q Consensus 459 i~~~~t~~e~~~~~~~l~~~lGk~-------~v~v~d-~~G----fi~nRl~---~a~~~Ea~~l~~~-Gv~~~dID~~~ 522 (725)
+.+. +++.++.++++++.+|.. ++++++ ..| ++.|.+. ..++.|+..+.+. |++++++..++
T Consensus 143 ~~gg--~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~ 220 (478)
T 1pgj_A 143 FPGG--TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVL 220 (478)
T ss_dssp EEEE--CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred eccC--CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4443 589999999999999987 556654 222 2345443 3567799887766 89999988887
Q ss_pred H
Q 004891 523 R 523 (725)
Q Consensus 523 ~ 523 (725)
.
T Consensus 221 ~ 221 (478)
T 1pgj_A 221 E 221 (478)
T ss_dssp H
T ss_pred H
Confidence 3
No 157
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.23 E-value=3.4e-11 Score=122.55 Aligned_cols=165 Identities=13% Similarity=0.102 Sum_probs=101.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHH-HHHHH-HHHHHH-HHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGI-KTIEAN-VRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~-~~~~~-~~i~~~-l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
..+||+|||+|.||.+||..|+++|++|++||++++. +.+.. ..+.+. +..+.+ ..+.....+..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~e 86 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP-----------EHPHVHLAAFAD 86 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-----------GSTTCEEEEHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-----------hcCceeccCHHH
Confidence 4579999999999999999999999999999999886 11100 000000 001111 112223333336
Q ss_pred cccCCCEEEEeccCChHHHHHHHHHH-HHhCCCCeEEEecCCCC----------------Ch-HHHhcccCCCCcEEE-E
Q 004891 384 EFKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DL-NIVGEKTSSQDRIIG-A 444 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~~~k~~v~~~l-~~~~~~~~ii~s~tS~~----------------~~-~~l~~~~~~~~r~ig-~ 444 (725)
.+++||+||.|||.+. ..+++.++ .+.+ ++++|++.+.++ .+ ..+.+.+. ..+++. +
T Consensus 87 ~~~~aDvVilavp~~~--~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~-~~~vv~~~ 162 (245)
T 3dtt_A 87 VAAGAELVVNATEGAS--SIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP-EAKVVKTL 162 (245)
T ss_dssp HHHHCSEEEECSCGGG--HHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST-TSEEEECS
T ss_pred HHhcCCEEEEccCcHH--HHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC-CCeEEEee
Confidence 7789999999999443 34666677 6666 778887766321 22 23444443 345554 4
Q ss_pred ecCCCC--------CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCe-eEEEcC
Q 004891 445 HFFSPA--------HVMPLLEIVRTERTSAQVILDLMTVGKIIKKV-PVVVGN 488 (725)
Q Consensus 445 h~~~p~--------~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~-~v~v~d 488 (725)
++...+ ...++..++.|. ++++.+.++++++.+|.. ++.+++
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred cccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCc
Confidence 443211 112233344454 699999999999999975 477776
No 158
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.22 E-value=2.3e-11 Score=136.01 Aligned_cols=191 Identities=13% Similarity=0.068 Sum_probs=127.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-cc--
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF-- 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l-- 385 (725)
+||+|||+|.||..+|..|+++|++|++||+++++++...+. . ..| ..+..+++++ .+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~------~--~~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN------E--AKG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT------T--TTT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc------c--ccC-----------CCeEEeCCHHHHHhh
Confidence 479999999999999999999999999999999987765320 0 001 1234455553 33
Q ss_pred -cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCCCC---CCCeeeE
Q 004891 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH---VMPLLEI 458 (725)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p~~---~~~lvei 458 (725)
+++|+||+|||....+ ..++.++.+.++++++|++.+++.+.. .+.+.+. ....++++..+.++. .++ .+
T Consensus 64 l~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~--~i 140 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQAV-DNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP--SL 140 (482)
T ss_dssp BCSSCEEEECSCTTHHH-HHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEeCCChHHH-HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC--eE
Confidence 5899999999965444 456688889999999888766665532 3443332 233455543222111 112 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCee-------EEEcC-Ccc----hhhhhhh---HHHHHHHHHHHHc--CCCHHHHHHH
Q 004891 459 VRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (725)
Q Consensus 459 i~~~~t~~e~~~~~~~l~~~lGk~~-------v~v~d-~~G----fi~nRl~---~a~~~Ea~~l~~~--Gv~~~dID~~ 521 (725)
+.+. +++.++.++++++.+|..+ +++++ ..| ++.|.+. ...++|+..+.+. |++++++..+
T Consensus 141 ~~gg--~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 141 MPGG--NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEEE--CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 4433 4778899999999999876 44432 223 3456553 4567799887764 8899999888
Q ss_pred HH
Q 004891 522 IR 523 (725)
Q Consensus 522 ~~ 523 (725)
+.
T Consensus 219 ~~ 220 (482)
T 2pgd_A 219 FE 220 (482)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 159
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.20 E-value=1.7e-11 Score=143.02 Aligned_cols=87 Identities=15% Similarity=0.167 Sum_probs=72.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCCC-CCCCHH
Q 004891 622 KEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPSRF 700 (725)
Q Consensus 622 ~~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~-~~p~~~ 700 (725)
..+.||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+.+.++++ |.| ++
T Consensus 495 Gfi~Nril~~~~~Ea~~l~~~G-~-~~e~id~~~-~~~g~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~-~~ 567 (725)
T 2wtb_A 495 GFAVNRMFFPYTQAAMFLVECG-A-DPYLIDRAI-SKFGMPM---GPFRLCDLVGFGVAIATATQFIENFSERTYKS-MI 567 (725)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHSGGGCCCC-TH
T ss_pred cHHHHHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhchHHHHHHHHHHHHhcCCccCCh-HH
Confidence 3589999999999999999999 4 799999999 8999999 9999999999999999999999888877 888 89
Q ss_pred HHHHH-------HcCCCCCCCC
Q 004891 701 LEERA-------TKGIPLSAPV 715 (725)
Q Consensus 701 l~~~~-------~~g~gf~~~~ 715 (725)
+++|+ |+|+|||+|+
T Consensus 568 l~~~v~~g~lG~k~g~GfY~y~ 589 (725)
T 2wtb_A 568 IPLMQEDKRAGEATRKGFYLYD 589 (725)
T ss_dssp HHHHHTTC--------------
T ss_pred HHHHHHCCCceecCCceeEeCC
Confidence 99998 7899999994
No 160
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.19 E-value=4.5e-11 Score=118.51 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=100.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
..+||+|||+|.||+++|..|+++|++|++||++++ .++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~ 56 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATT 56 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhc
Confidence 457899999999999999999999999999998854 356
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC---------------hHHHhcccCCCCcEEE-EecCCCC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPA 450 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~---------------~~~l~~~~~~~~r~ig-~h~~~p~ 450 (725)
+||+||+|+| .....++++++.+.++ ++++++.+++++ ...+++.+. ..+++. .|+...|
T Consensus 57 ~aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p 132 (209)
T 2raf_A 57 LGEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAA 132 (209)
T ss_dssp CCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHH
T ss_pred cCCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHh
Confidence 8999999999 6666788888888777 888888777654 234444443 356777 5654222
Q ss_pred C------C--CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 451 H------V--MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 451 ~------~--~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
. . .+...++.+ .+++..+.++++++.+|..++.+++
T Consensus 133 ~~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 133 TLQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred hccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 1 1 122222333 3689999999999999999998877
No 161
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.18 E-value=1.2e-11 Score=144.39 Aligned_cols=87 Identities=17% Similarity=0.248 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHHHHHhCCCCCCC--HH
Q 004891 623 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS--RF 700 (725)
Q Consensus 623 ~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~--~~ 700 (725)
.+.||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+.+.++++|.|+ ++
T Consensus 498 fi~Nril~~~~~Ea~~l~~~G-~-~~~~id~~~-~~~G~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~~~~~ 571 (715)
T 1wdk_A 498 FLVNRVLFPYFGGFAKLVSAG-V-DFVRIDKVM-EKFGWPM---GPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRRSA 571 (715)
T ss_dssp TTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHCHHHHCCSSCCH
T ss_pred hhhhHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhhHHHHHHHHHHHHHhcCCccCCChHHH
Confidence 589999999999999999999 4 799999999 8999999 99999999999999999999998887889998 89
Q ss_pred HHHHH-------HcCCCCCCCC
Q 004891 701 LEERA-------TKGIPLSAPV 715 (725)
Q Consensus 701 l~~~~-------~~g~gf~~~~ 715 (725)
|++|+ |+|+|||+|+
T Consensus 572 l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 572 IDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp HHHHHHTTCCBTTTTBSSSEEC
T ss_pred HHHHHhCchhhhcCCcEEEecc
Confidence 99998 7899999995
No 162
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.18 E-value=2.8e-11 Score=128.33 Aligned_cols=122 Identities=17% Similarity=0.236 Sum_probs=89.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+||+|||+|.||.++|..++..|+ +|++||++++.++.....+.+...... ...+++.+++++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIG------------SPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHT------------CCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccC------------CCCEEEECCCHHHHCC
Confidence 589999999999999999999999 999999999988864434433322110 1246777788888999
Q ss_pred CCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhcccC--CCCcEEEE
Q 004891 388 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 444 (725)
Q Consensus 388 aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~--~~~r~ig~ 444 (725)
||+||+++ |+ +..+++++++++.+++ |++++ +||++... +.++.... .|.|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 4577999999999998 66655 46654432 33333222 46677775
No 163
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.18 E-value=1.9e-11 Score=121.80 Aligned_cols=149 Identities=13% Similarity=0.127 Sum_probs=100.6
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
.++||+|||+|.||..+|..|++.|++|+++|+++++++... +.| +..++..+.++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~~~~~~~~ 82 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSA-------------AQVTFQEEAVS 82 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTT-------------SEEEEHHHHTT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------CceecHHHHHh
Confidence 456899999999999999999999999999999988765431 111 22222225678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh----------cccCCCCcEEEEecCCCCC-----
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGAHFFSPAH----- 451 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~----------~~~~~~~r~ig~h~~~p~~----- 451 (725)
++|+||+|+|.. ....+++ +.+.. ++++|++.+++.+.+.+. +.+. ..+++.. + ++..
T Consensus 83 ~~DvVi~av~~~--~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~-~-n~~~~~~~~ 155 (215)
T 2vns_A 83 SPEVIFVAVFRE--HYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKA-F-NVISAWTLQ 155 (215)
T ss_dssp SCSEEEECSCGG--GSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEE-C-TTBCHHHHH
T ss_pred CCCEEEECCChH--HHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEec-c-ccccHhHhc
Confidence 999999999943 3344554 55555 788888888888765442 2232 2345542 1 2211
Q ss_pred ----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 452 ----~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
..+...++.+ .+++.++.++++++.+|..++++++
T Consensus 156 ~~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 156 AGPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp TCSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred ccccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 1111122333 2799999999999999999999976
No 164
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.17 E-value=4.1e-11 Score=129.49 Aligned_cols=170 Identities=12% Similarity=0.016 Sum_probs=104.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
|+||+|||+|.||.++|..|+++|++|++||++++.++...+.. .....+... .....+..+++. +.++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~-------~~~~~~~~~---~~~~~~~~~~~~~~~~~ 84 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKR-------ENVLFLKGV---QLASNITFTSDVEKAYN 84 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHT-------BCTTTSTTC---BCCTTEEEESCHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC-------ccccccccc---ccccceeeeCCHHHHHc
Confidence 45999999999999999999999999999999998876653210 000000000 000134445555 4578
Q ss_pred CCCEEEEeccCChHHHHHHHHH----HHHhCCC-CeEEEecCCCCChHH---HhcccCC--CC-c-EEEEecCCCCC--C
Q 004891 387 DVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLNI---VGEKTSS--QD-R-IIGAHFFSPAH--V 452 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~----l~~~~~~-~~ii~s~tS~~~~~~---l~~~~~~--~~-r-~ig~h~~~p~~--~ 452 (725)
+||+||+||| .....+++.+ +.+.+++ +++|++.++++.+.. +.+.+.. +. . .+...|..+.. .
T Consensus 85 ~aDvVilav~--~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~v~~gp~~~~~~~~ 162 (366)
T 1evy_A 85 GAEIILFVIP--TQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLSVLAGPSFAIEVAT 162 (366)
T ss_dssp TCSSEEECCC--HHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEEEEESSCCHHHHHT
T ss_pred CCCEEEECCC--hHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEEEEeCCChHHHHHh
Confidence 9999999999 4677788888 8888888 888888776665531 1111111 11 1 11111111110 0
Q ss_pred CCeeeEecCCCCCHHHHHHHHHHHHHc--CCeeEEEcCCc
Q 004891 453 MPLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNCT 490 (725)
Q Consensus 453 ~~lveii~~~~t~~e~~~~~~~l~~~l--Gk~~v~v~d~~ 490 (725)
.....++.+ ..+++..+.+.+++... |..+++..+..
T Consensus 163 g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di~ 201 (366)
T 1evy_A 163 GVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDTV 201 (366)
T ss_dssp TCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCHH
T ss_pred CCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCch
Confidence 111112222 23678899999999999 77666666643
No 165
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.17 E-value=2.1e-10 Score=125.16 Aligned_cols=200 Identities=17% Similarity=0.167 Sum_probs=122.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHh----hcCcccccCc-c
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY-S 383 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~----~~~i~~~~~~-~ 383 (725)
+||+|||+|.||.++|..|++ |++|++||+++++++...+. ...+.....+.. ..++..++++ +
T Consensus 1 MkI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~----------~~~i~e~~l~~~~~~~~~~l~~t~~~~~ 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNG----------LSPIQDEYIEYYLKSKQLSIKATLDSKA 69 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTT----------CCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcC----------CCCcCCCCHHHHHHhccCcEEEeCCHHH
Confidence 379999999999999999999 99999999999987764321 001111111111 1245666666 5
Q ss_pred cccCCCEEEEeccCCh---------HHHHHHHHHHHHhCCCCeEEEe-cCCCCCh-HHHhcccCCCCcEEEEec--CCCC
Q 004891 384 EFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILAT-NTSTIDL-NIVGEKTSSQDRIIGAHF--FSPA 450 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~---------~~k~~v~~~l~~~~~~~~ii~s-~tS~~~~-~~l~~~~~~~~r~ig~h~--~~p~ 450 (725)
.+++||+||.|||... ....++++.+.+ ++++++|+. +|..... ..+.+.+... .+...| ..|.
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G 146 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRES 146 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTT
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCc
Confidence 6789999999999764 256777888888 788888775 3333332 2444443322 222222 1111
Q ss_pred CCC-Cee---eEecCCCCC-----HHHHHHHHHHHHH-cCC-e-eEEEcCC-----cchhhhhhh---HHHHHHHHHHHH
Q 004891 451 HVM-PLL---EIVRTERTS-----AQVILDLMTVGKI-IKK-V-PVVVGNC-----TGFAVNRAF---FPYSQSARLLVS 510 (725)
Q Consensus 451 ~~~-~lv---eii~~~~t~-----~e~~~~~~~l~~~-lGk-~-~v~v~d~-----~Gfi~nRl~---~a~~~Ea~~l~~ 510 (725)
... ... .++.|.... .+..+.+.+++.. ..+ . ++++++. ..++.|-+. .+++||+..+.+
T Consensus 147 ~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~ 226 (402)
T 1dlj_A 147 KALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAE 226 (402)
T ss_dssp STTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 110 001 134333221 1556777777765 332 2 5666552 234556442 577899888876
Q ss_pred c-CCCHHHHHHHH
Q 004891 511 L-GVDVFRIDSAI 522 (725)
Q Consensus 511 ~-Gv~~~dID~~~ 522 (725)
. |+++.++-.++
T Consensus 227 ~~Gid~~~v~~~~ 239 (402)
T 1dlj_A 227 SRKLNSHMIIQGI 239 (402)
T ss_dssp HTTCCHHHHHHHH
T ss_pred HhCCCHHHHHHHh
Confidence 6 99999998887
No 166
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.16 E-value=5.6e-11 Score=138.00 Aligned_cols=120 Identities=14% Similarity=0.153 Sum_probs=97.3
Q ss_pred CHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHHhh
Q 004891 465 SAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLA 538 (725)
Q Consensus 465 ~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a~~~Ea~~l~~~Gv--~~~dID~~~-~~~G~p~---Gpf~~~D~~ 538 (725)
+++..+.+..+-...+...-... ..-|..|++++++||+++++++|+ ++.|||.++ .|+|||. |||+++|.+
T Consensus 612 ~~~~~~~~~~~~~~~~~~~~~~~--~~ei~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~ 689 (742)
T 3zwc_A 612 DPWLSTFLSQYREVHHIEQRTIS--KEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASV 689 (742)
T ss_dssp CHHHHHHHHHHHHHHTCCCCCCC--HHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHH
T ss_pred ChHHHHHHHHHhhhcCCCcCCCC--HHHHHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHH
Confidence 45554444444443332221111 123789999999999999999997 899999999 9999998 999999999
Q ss_pred chHHHHHHHHHHHhhCCC--CCCCcHHHHHHHHcCCCccccCceeeeccC
Q 004891 539 GYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGRNGKANGKGLYTYEK 586 (725)
Q Consensus 539 Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~ 586 (725)
|++.+...++.+...+|+ ++.|+++|++|+++|....+.++|||.+.+
T Consensus 690 G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~~~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 690 GLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPLKEWQSLAGPHG 739 (742)
T ss_dssp CHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCGGGHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCCCcccccccccCCCC
Confidence 999999999999999997 344999999999999998888899988754
No 167
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.15 E-value=1.5e-11 Score=134.72 Aligned_cols=90 Identities=19% Similarity=0.241 Sum_probs=74.6
Q ss_pred cchhhhhhhHHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHHhhchHHHHHHHHHHHhhCCCC--CCCc
Q 004891 490 TGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVAAATSKEFDKAFPDR--SFQS 561 (725)
Q Consensus 490 ~Gfi~nRl~~a~~~Ea~~l~~~Gv--~~~dID~~~-~~~G~p~---Gpf~~~D~~Gld~~~~~~~~l~~~~~~~--~~~~ 561 (725)
...+.+|++.+++||+++++++|+ ++.|||.++ .|+|||. |||+++|.+|++.+...++.|...+|++ +.|+
T Consensus 355 ~~~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~~~~~l~~l~~~~g~~~~~~p~ 434 (460)
T 3k6j_A 355 DQDVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYIVA 434 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHHHHHHHHHHHHHCTTCGGGSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 457899999999999999999997 699999999 9999998 9999999999999999999999999998 4599
Q ss_pred HHHHHHHHcCCCccccCc
Q 004891 562 PLVDLLLKSGRNGKANGK 579 (725)
Q Consensus 562 ~~l~~~v~~g~~G~k~g~ 579 (725)
++|++|+++|++|.|||.
T Consensus 435 ~~L~~~a~~g~~~~~~~~ 452 (460)
T 3k6j_A 435 DALKTANVSTGSSGSSGG 452 (460)
T ss_dssp HHHHHHC-----------
T ss_pred HHHHHHHHcCCCccccCC
Confidence 999999999999999984
No 168
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.12 E-value=6.6e-11 Score=125.02 Aligned_cols=124 Identities=20% Similarity=0.296 Sum_probs=89.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
+++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.+.... ...+++.+++++++
T Consensus 3 ~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~------------~~~~i~~t~d~~al 70 (322)
T 1t2d_A 3 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY------------SNCKVSGSNTYDDL 70 (322)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT------------CCCCEEEECCGGGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcC------------CCcEEEECCCHHHh
Confidence 35699999999999999999999999 999999999988765444443332111 12356777788889
Q ss_pred cCCCEEEEec--cCCh-----------------HHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhcccC--CCCcEE
Q 004891 386 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRII 442 (725)
Q Consensus 386 ~~aDlVIeav--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~--~~~r~i 442 (725)
++||+||+++ |++. .+++++++++.+++ |++++ +||++.+. +.+..... .+.|++
T Consensus 71 ~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rvi 148 (322)
T 1t2d_A 71 AGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKII 148 (322)
T ss_dssp TTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEE
Confidence 9999999998 6432 47889999999998 66655 45554443 33333322 456777
Q ss_pred EE
Q 004891 443 GA 444 (725)
Q Consensus 443 g~ 444 (725)
|+
T Consensus 149 G~ 150 (322)
T 1t2d_A 149 GL 150 (322)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 169
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.10 E-value=8.9e-11 Score=126.20 Aligned_cols=171 Identities=16% Similarity=0.030 Sum_probs=107.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCC-------CcEEEEeCChH-----HHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~e-----~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~ 374 (725)
.++||+|||+|.||+++|..|+++| ++|++||++++ .++...+. ......... .....
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~-------~~~~~~~~~---~~~~~ 76 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQ-------HENVKYLPG---HKLPP 76 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHH-------SCCTTTSTT---CCCCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhc-------CcccccCCc---ccCcc
Confidence 3469999999999999999999999 99999999987 65543210 000000000 00012
Q ss_pred CcccccCc-ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--------HH-HhcccCCCCcEEEE
Q 004891 375 MLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NI-VGEKTSSQDRIIGA 444 (725)
Q Consensus 375 ~i~~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--------~~-l~~~~~~~~r~ig~ 444 (725)
.+..+++. +.+++||+||+|||+ ....++++++.+.++++++|++.++++.+ .+ +.+.+..+ ..+-.
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~~--~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v~~ 153 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVPH--QFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSVLM 153 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCCG--GGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEEEE
T ss_pred CeEEEcCHHHHHcCCCEEEEeCCH--HHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEEEE
Confidence 34455565 557899999999994 67788999999999999999988877653 11 12222211 11122
Q ss_pred ecCCCCC--CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc
Q 004891 445 HFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (725)
Q Consensus 445 h~~~p~~--~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G 491 (725)
.|..+.. .+....++.+ ..+++..+.+.+++...|..+.+..|..+
T Consensus 154 gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 201 (354)
T 1x0v_A 154 GANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVDT 201 (354)
T ss_dssp CSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHHH
T ss_pred CCCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCchH
Confidence 2221111 0111112222 23688899999999999988777776544
No 170
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.10 E-value=1.6e-10 Score=124.89 Aligned_cols=154 Identities=11% Similarity=0.063 Sum_probs=109.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC------CCcEEEEeCChH-HHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~------G~~V~~~d~~~e-~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
++||+|||+|.||.++|..|.++ |++|++.+++.+ ..+.+. +.|.... -....
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A~-----------e~G~~v~---------d~ta~ 113 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEAR-----------AAGFTEE---------SGTLG 113 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHHH-----------HTTCCTT---------TTCEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHHH-----------HCCCEEe---------cCCCC
Confidence 37999999999999999999999 999987776533 323221 2221100 00012
Q ss_pred Cc-ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhc---ccCCCCcEEEEecCCCCCC----
Q 004891 381 DY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV---- 452 (725)
Q Consensus 381 ~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~---~~~~~~r~ig~h~~~p~~~---- 452 (725)
+. +++++||+||.++|. ....+++.++.+.++++++| +..+++.+..+.+ .......++.+||..|.+.
T Consensus 114 s~aEAa~~ADVVILaVP~--~~~~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~ 190 (525)
T 3fr7_A 114 DIWETVSGSDLVLLLISD--AAQADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRL 190 (525)
T ss_dssp EHHHHHHHCSEEEECSCH--HHHHHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHH
T ss_pred CHHHHHhcCCEEEECCCh--HHHHHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHH
Confidence 33 678899999999994 44457888999999999986 6778888876664 3333457999999998875
Q ss_pred ---C-----Ceee--EecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004891 453 ---M-----PLLE--IVRTERTSAQVILDLMTVGKIIKKVPV 484 (725)
Q Consensus 453 ---~-----~lve--ii~~~~t~~e~~~~~~~l~~~lGk~~v 484 (725)
+ ..+. +..+...+.+..+.+..++..+|...+
T Consensus 191 y~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 191 YVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred HhcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 1 1222 333445677889999999999999754
No 171
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.09 E-value=6.8e-11 Score=123.25 Aligned_cols=168 Identities=10% Similarity=-0.041 Sum_probs=108.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
+||+|||+|.||+.+|..|+++|++|++||++++.++.. ...+.... .....+. .++.+.++++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~~~~----~~~~~~~-~~~~~~~~~~ 64 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVETDGS----IFNESLT-ANDPDFLATS 64 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECTTSC----EEEEEEE-ESCHHHHHTC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcCCCc----eeeeeee-ecCccccCCC
Confidence 379999999999999999999999999999998653321 11110000 0000111 2334567889
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhcccCCCCcEE-EEecC-----CCCCCC---C-eee
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFF-----SPAHVM---P-LLE 457 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~~~~r~i-g~h~~-----~p~~~~---~-lve 457 (725)
|+||.|+|.. ...++++++.+.++++++|++.++++... .+.+.+. . ++ |.+++ .| ... . .+.
T Consensus 65 d~vi~~v~~~--~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p-~~~~~~~g~~~ 138 (291)
T 1ks9_A 65 DLLLVTLKAW--QVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGN-VIIHVANGITH 138 (291)
T ss_dssp SEEEECSCGG--GHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETT-EEEEEECCCEE
T ss_pred CEEEEEecHH--hHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCC-EEEEecccceE
Confidence 9999999954 35788899999999899888877776553 3444332 2 44 44432 23 100 0 111
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhH
Q 004891 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 499 (725)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~ 499 (725)
+.... .+++.++.+.++++.+|..+++.++..+...+.+..
T Consensus 139 i~~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~ 179 (291)
T 1ks9_A 139 IGPAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAV 179 (291)
T ss_dssp EEESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHH
T ss_pred EccCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHee
Confidence 22212 245677889999999999888888866666665543
No 172
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.08 E-value=1e-10 Score=124.02 Aligned_cols=123 Identities=20% Similarity=0.256 Sum_probs=88.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 385 (725)
.+||+|||+|.||.++|..|+..|+ +|++||++++.++.....+.+.+... + ...+++.+++++ ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~~ea~ 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSYEAAL 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCHHHHh
Confidence 4689999999999999999999998 99999999998887544444433211 1 123577778885 89
Q ss_pred cCCCEEEEec--cCCh-----------------HHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhc-ccC-CCCcEE
Q 004891 386 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGE-KTS-SQDRII 442 (725)
Q Consensus 386 ~~aDlVIeav--pe~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~-~~~-~~~r~i 442 (725)
++||+||+++ |++. .+++++++++.+++ |++++ +||++.+. +.+.. ... .+.|++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rvi 154 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMIC 154 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEE
Confidence 9999999999 7543 35889999999998 66665 35554443 33332 222 456777
Q ss_pred EE
Q 004891 443 GA 444 (725)
Q Consensus 443 g~ 444 (725)
|+
T Consensus 155 G~ 156 (331)
T 1pzg_A 155 GM 156 (331)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 173
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.05 E-value=8.4e-10 Score=117.65 Aligned_cols=159 Identities=13% Similarity=0.028 Sum_probs=93.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
+||+|||+|.||+.+|..|+++|++|++||+++++++...+.- +.. ...+. . + .+..+++.+.++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g---~~~-~~~~~-~-------~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSH---TSP-YVEES-K-------I-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHS---CBT-TBTTC-C-------C-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhC---Ccc-cCCCC-e-------e-eEEEeCCHHHhcCC
Confidence 5899999999999999999999999999999998876543210 000 00000 0 0 24445565338899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH---HhcccC--CCC-cEEEEecCCCCC--CCCeeeEec
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTS--SQD-RIIGAHFFSPAH--VMPLLEIVR 460 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~---l~~~~~--~~~-r~ig~h~~~p~~--~~~lveii~ 460 (725)
|+||.||| .....+++.++.+ ++++|++.+.++.... +++.+. .+. ..+...|..+.. .+....++.
T Consensus 82 DvVil~vk--~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~ 156 (335)
T 1z82_A 82 DILVIAIP--VQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTL 156 (335)
T ss_dssp EEEEECSC--GGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEE
T ss_pred CEEEEECC--HHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEE
Confidence 99999999 3555566655543 6777777665554421 221111 011 111222221111 111112222
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 489 (725)
+.. + .+.+.+++...|..+.+..|.
T Consensus 157 g~~-~---~~~~~~ll~~~g~~~~~~~di 181 (335)
T 1z82_A 157 AGE-N---SKELQKRISTEYFRVYTCEDV 181 (335)
T ss_dssp EET-T---HHHHHHHHCCSSEEEEEESCH
T ss_pred Eeh-h---HHHHHHHhCCCCEEEEecCch
Confidence 221 2 678899999988887776664
No 174
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.03 E-value=4e-10 Score=122.09 Aligned_cols=170 Identities=11% Similarity=-0.017 Sum_probs=107.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-------CcEEEEeCChH-----HHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcC
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G-------~~V~~~d~~~e-----~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~ 375 (725)
++||+|||+|.||++||..|+++| ++|++||++++ .++...+. ......+.. ......
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~-------~~~~~~~~~---~~~~~~ 90 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNK-------HENTKYLKG---VPLPHN 90 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHH-------CBCTTTSTT---CBCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhc-------CcccccCCc---ccCcCC
Confidence 468999999999999999999999 99999999987 54443210 000000000 000123
Q ss_pred cccccCc-ccccCCCEEEEeccCChHHHHHHHHHHHH----hCCCCeEEEecCCCCChH-----HH----hcccCCCCcE
Q 004891 376 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDLN-----IV----GEKTSSQDRI 441 (725)
Q Consensus 376 i~~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~----~~~~~~ii~s~tS~~~~~-----~l----~~~~~~~~r~ 441 (725)
+..+++. +.+++||+||+||| .....+++.++.+ .++++++|++.++++.+. .+ .+....+ ..
T Consensus 91 i~~~~~~~ea~~~aDvVilav~--~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~ 167 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVP--CQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-CS 167 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCC--HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-EE
T ss_pred eEEECCHHHHHcCCCEEEEcCC--HHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-EE
Confidence 5556666 55789999999999 5778889999988 888999999888776541 11 1212111 11
Q ss_pred EEEecCCCCC--CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcc
Q 004891 442 IGAHFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (725)
Q Consensus 442 ig~h~~~p~~--~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~G 491 (725)
+-..|..+.. .+....++.+. .+++..+.+++++...|..+.+..|..|
T Consensus 168 v~~gp~~a~~v~~g~~~~~~~~~-~~~~~~~~v~~ll~~~g~~~~~~~di~~ 218 (375)
T 1yj8_A 168 ALSGANIAMDVAMENFSEATIGG-NDKDSLVIWQRVFDLPYFKINCVNETIE 218 (375)
T ss_dssp EEECSCCHHHHHTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCSHH
T ss_pred EEeCCchHHHHHhCCCeEEEEec-CCHHHHHHHHHHhCCCCeEEEEeCCcHH
Confidence 1111211110 01111222222 3678899999999999988887777654
No 175
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.03 E-value=5.3e-10 Score=118.05 Aligned_cols=170 Identities=11% Similarity=-0.013 Sum_probs=104.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-----C-CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHH-HHhhcCcccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA-NNALKMLKGV 379 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~-----G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~-~~~~~~i~~~ 379 (725)
..+||+|||+|.||+.+|..|+++ | ++|++||+ ++.++...+. .|....... ......+..+
T Consensus 7 ~~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~ 75 (317)
T 2qyt_A 7 QPIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAA----------GGLRVVTPSRDFLARPTCVT 75 (317)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHH----------TSEEEECSSCEEEECCSEEE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhc----------CCeEEEeCCCCeEEecceEe
Confidence 346899999999999999999999 9 99999999 7665553210 111000000 0000012223
Q ss_pred cCcccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhcccCCCCcEEEEecCCCCCC------
Q 004891 380 LDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAHFFSPAHV------ 452 (725)
Q Consensus 380 ~~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~~~~r~ig~h~~~p~~~------ 452 (725)
++.+.+.++|+||.|||... ..++++++.+.++++++|++.+.++... .+.+.+....-+.|+.+...+..
T Consensus 76 ~~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~ 153 (317)
T 2qyt_A 76 DNPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYISARKSAPGLIT 153 (317)
T ss_dssp SCHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEE
T ss_pred cCccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEE
Confidence 44456788999999998544 4678888988888888888877777763 45555543221223322211111
Q ss_pred --CCeeeE-ecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCCc
Q 004891 453 --MPLLEI-VRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCT 490 (725)
Q Consensus 453 --~~lvei-i~~--~~t~~e~~~~~~~l~~~lGk~~v~v~d~~ 490 (725)
.....+ +.. ...+++.+ .+.+++...|....+.++..
T Consensus 154 ~~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~ 195 (317)
T 2qyt_A 154 LEADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDID 195 (317)
T ss_dssp EEEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHH
T ss_pred EcCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHH
Confidence 111112 322 33457777 89999999998777666643
No 176
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.03 E-value=5.4e-10 Score=119.01 Aligned_cols=164 Identities=13% Similarity=0.046 Sum_probs=104.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeC--ChHHHHHHHHHHHHHHHhhHHcCC-CCHHHHHHhhcCccccc--Cc-
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY- 382 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~-~~~~~~~~~~~~i~~~~--~~- 382 (725)
+||+|||+|.||+++|..|+++|++|++||+ +++.++...+ .+. +... ..+..+..++ ++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~g---~~~~~~~~~~~~~~~ 66 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-----------GREHPRLG---VKLNGVEIFWPEQLE 66 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-----------TCCBTTTT---BCCCSEEEECGGGHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHH-----------hCcCcccC---ccccceEEecHHhHH
Confidence 3799999999999999999999999999999 8887665421 121 0000 0001223344 44
Q ss_pred ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC---C---hHHHhcccCC--CCcEEEEecCCCCCC--
Q 004891 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---D---LNIVGEKTSS--QDRIIGAHFFSPAHV-- 452 (725)
Q Consensus 383 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~---~---~~~l~~~~~~--~~r~ig~h~~~p~~~-- 452 (725)
+.+++||+||.|+|.+ ...+++.++.+ ++++++|++.+.++ + ...+.+.+.. +..........|...
T Consensus 67 ~~~~~~D~vi~~v~~~--~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~ 143 (335)
T 1txg_A 67 KCLENAEVVLLGVSTD--GVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIARE 143 (335)
T ss_dssp HHHTTCSEEEECSCGG--GHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHH
T ss_pred HHHhcCCEEEEcCChH--HHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHH
Confidence 4578999999999944 56788889988 88899888776565 2 2344443332 110001111223221
Q ss_pred ---CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCc
Q 004891 453 ---MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCT 490 (725)
Q Consensus 453 ---~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~ 490 (725)
.....++.+. .+++..+.+.++++..|..+.+..+..
T Consensus 144 ~~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di~ 183 (335)
T 1txg_A 144 VAKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDII 183 (335)
T ss_dssp HHTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCHH
T ss_pred HHccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCchH
Confidence 1111233333 268889999999999998877777643
No 177
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=98.98 E-value=3.2e-09 Score=112.22 Aligned_cols=174 Identities=14% Similarity=0.097 Sum_probs=113.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
.++||+|||+|.||+.+|..|+++|++|++| ++++.++...+. .+ ....... .....+..+++.+.++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~---g~--~~~~~~~------~~~~~~~~~~~~~~~~ 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEAT---GL--RLETQSF------DEQVKVSASSDPSAVQ 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHH---CE--EEECSSC------EEEECCEEESCGGGGT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhC---Ce--EEEcCCC------cEEEeeeeeCCHHHcC
Confidence 3579999999999999999999999999999 998887665321 00 0000000 0112344556666778
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhcccCCCCcEEEEe------cCCCCCCC---Cee
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAH------FFSPAHVM---PLL 456 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~~~~r~ig~h------~~~p~~~~---~lv 456 (725)
++|+||.|||.. ...++++++.+.++++++|++.++++... .+.+.+. .++++.. ...|-... ..
T Consensus 86 ~~D~vilavk~~--~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g- 160 (318)
T 3hwr_A 86 GADLVLFCVKST--DTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRG- 160 (318)
T ss_dssp TCSEEEECCCGG--GHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEE-
T ss_pred CCCEEEEEcccc--cHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCc-
Confidence 999999999944 56788999999999999999999999874 4555554 4444321 11222111 11
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHH
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a 500 (725)
.+.-|. .+..+.+.+++...|....+..|..+.....++..
T Consensus 161 ~~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N 201 (318)
T 3hwr_A 161 ELVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILN 201 (318)
T ss_dssp EEEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred eEEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHH
Confidence 111222 23456788888888887777778776666655443
No 178
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=98.96 E-value=6e-10 Score=116.37 Aligned_cols=122 Identities=21% Similarity=0.263 Sum_probs=82.3
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 304 ~~~~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
+.++++||+|||+|.||.++|..++..|+ +|+++|++++....+.+.. + . ...+++.+++
T Consensus 10 ~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~-~-----~------------~~~~i~~t~d 71 (303)
T 2i6t_A 10 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLE-I-----F------------NLPNVEISKD 71 (303)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHH-H-----H------------TCTTEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHh-h-----h------------cCCCeEEeCC
Confidence 34567899999999999999999999999 9999999987322332211 0 0 0125666778
Q ss_pred cccccCCCEEEEec-------------cCChHHHHHHHHHHHHhCCCCeEE--EecCCCCChHHHhcccC-CCCcEEEE
Q 004891 382 YSEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS-SQDRIIGA 444 (725)
Q Consensus 382 ~~~l~~aDlVIeav-------------pe~~~~k~~v~~~l~~~~~~~~ii--~s~tS~~~~~~l~~~~~-~~~r~ig~ 444 (725)
++++++||+||+++ .++..+++++++++.+++ |++++ +||.+......+..... .+.|++|+
T Consensus 72 ~~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 72 LSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp GGGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 89999999999997 889999999999999998 66665 45533322112222222 25677775
No 179
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.94 E-value=3.7e-09 Score=104.20 Aligned_cols=141 Identities=18% Similarity=0.198 Sum_probs=98.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.++..+.+.+.+.|..++.++.++.|+|. +.|+ ++. ....++ +.|..+++||++.
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPGG------~v~----------------a~~~I~-~~i~~~~~pV~~~ 91 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYINSPGG------SIS----------------AGMAIY-DTMVLAPCDIATY 91 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHCSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCCC------CHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 47889999999999999877777777663 3332 211 122445 6688899999999
Q ss_pred EcccccchhhHHhhhcCE--EEeeCCceEeCcccccCCCCCchhh------------------chHhhhhC--HHHHHHH
Q 004891 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLVG--LSKAIEM 162 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~--~ia~~~a~~~~pe~~~Gl~p~~g~~------------------~~l~r~vG--~~~a~~l 162 (725)
+.|.|.++|..++++||. |++.+.+.++.....-|. .|-. ..+.+..| .....++
T Consensus 92 v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~ 168 (208)
T 2cby_A 92 AMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEAD 168 (208)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred ECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999999 999999999987654221 1110 11233333 3446678
Q ss_pred HHcCCCCCHHHHHHcCCcceecC-cchHHHHH
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 193 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~-~~~l~~~a 193 (725)
+..|..++++||++.||||++.+ .+++++..
T Consensus 169 ~~~~~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 169 SDRDRWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp HHTTCEEEHHHHHHHTSCSEECSCC-------
T ss_pred HhCCcEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 88999999999999999999984 44555443
No 180
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.46 E-value=1.1e-10 Score=114.80 Aligned_cols=148 Identities=14% Similarity=0.163 Sum_probs=97.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
+||+|||+|.||..+|..|.+.|++|++||++++ .+... ..+ +...+..+.++++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~-----------~~g-------------~~~~~~~~~~~~a 74 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLL-----------PRG-------------AEVLCYSEAASRS 74 (201)
Confidence 5799999999999999999999999999999876 32211 111 1122222567899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--------HHHhcccCCCCcEEEEecCCCCCCCC-ee---
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL--- 456 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--------~~l~~~~~~~~r~ig~h~~~p~~~~~-lv--- 456 (725)
|+||.|+|.. ....++ ++.. ..++++|++.+++++. ..+.+.+.. .+++...++.|..... ..
T Consensus 75 DvVilav~~~--~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g 149 (201)
T 2yjz_A 75 DVIVLAVHRE--HYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDA 149 (201)
Confidence 9999999953 334454 4543 3467888877777653 333333322 3455544444443332 11
Q ss_pred ---eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004891 457 ---EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (725)
Q Consensus 457 ---eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (725)
.++.|. +++..+.+.++++.+|+.++.+++
T Consensus 150 ~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 150 SRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 234443 578899999999999999998876
No 181
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=98.92 E-value=2.2e-09 Score=113.34 Aligned_cols=150 Identities=18% Similarity=0.217 Sum_probs=99.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.||.++|..|++.|+ +|+++|+++++++.....+.+.+. .. . ..++.. ++.++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~--~----------~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT--R----------RANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS--C----------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc--C----------CcEEEe-CCHHHhC
Confidence 489999999999999999999999 999999999887764433322211 00 0 112333 3567889
Q ss_pred CCCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCeEEE--ecCCCCChHHHhcc-cC-CCCcEEEEecCC
Q 004891 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEK-TS-SQDRIIGAHFFS 448 (725)
Q Consensus 387 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~--s~tS~~~~~~l~~~-~~-~~~r~ig~h~~~ 448 (725)
+||+||+|++.. ..+++++++++.+++ ++++++ ||.+... +.+... .. .+.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~-~~~~~~~~~~~~~rviG~---- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVL-TYFFLKESGMDPRKVFGS---- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHH-HHHHHHHHTCCTTTEEEC----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHH-HHHHHHHhCCChhhEEee----
Confidence 999999999852 246788889999986 565543 3433321 233322 22 45677775
Q ss_pred CCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhh
Q 004891 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN 495 (725)
Q Consensus 449 p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~n 495 (725)
.|..+.......+.+.+|..+ ++..+++.+
T Consensus 141 --------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G 170 (319)
T 1a5z_A 141 --------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIG 170 (319)
T ss_dssp --------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEB
T ss_pred --------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEe
Confidence 355666777777778888543 444455554
No 182
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.90 E-value=6.1e-09 Score=110.94 Aligned_cols=169 Identities=11% Similarity=0.144 Sum_probs=104.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
++||+|||+|.||+.+|..|+++|++|++|+++ +.++... +.|......-......+..+++.+.+.+
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQ-----------TAGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHH-----------HTCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHH-----------HCCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 578999999999999999999999999999995 4444322 1121000000000012334456656789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC-------------------hH-HHhcccCCCCcEEE-Eec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------LN-IVGEKTSSQDRIIG-AHF 446 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~-------------------~~-~l~~~~~~~~r~ig-~h~ 446 (725)
+|+||.||| .....++++++.+.++++++|++...+++ .. .+.+.++ ..++++ +-+
T Consensus 71 ~D~Vilavk--~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVK--APALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVVH 147 (335)
T ss_dssp CSEEEECCC--HHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEEC
T ss_pred CCEEEEeCC--chhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEEE
Confidence 999999998 45566888889888999999988877753 11 3333332 234433 222
Q ss_pred C-----CCCCC---CCeeeEecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCCcch
Q 004891 447 F-----SPAHV---MPLLEIVRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492 (725)
Q Consensus 447 ~-----~p~~~---~~lveii~~--~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gf 492 (725)
+ .|-.. ... .++-| ...+.+..+.+.+++...|....+..|..+.
T Consensus 148 ~~a~~~~pg~v~~~~~g-~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~ 202 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGR-RLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRD 202 (335)
T ss_dssp CCEEESSTTEEEECSCC-EEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHH
T ss_pred EEEEEcCCcEEEECCCC-eEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHH
Confidence 1 12111 000 12222 2234577788899999988777776776653
No 183
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.87 E-value=2.9e-09 Score=111.93 Aligned_cols=99 Identities=14% Similarity=0.243 Sum_probs=74.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ......+++.+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~------------~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP------------IEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHh------------hcCCCeEEEECCCHHHHCC
Confidence 689999999999999999999997 999999999877643222211110 0111235666678889999
Q ss_pred CCEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEEE
Q 004891 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILA 420 (725)
Q Consensus 388 aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~ 420 (725)
||+||+++ .++..+++++++++.+++ |+++++
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi 116 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVII 116 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEE
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 99999997 344578888999999987 677654
No 184
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.86 E-value=2.4e-08 Score=105.19 Aligned_cols=175 Identities=11% Similarity=0.032 Sum_probs=109.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCC-CHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+||+|||+|.||+.+|..|+++|++|++|++++ .+... +.|.. ....-...+..+..+++.+.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~-----------~~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIA-----------GNGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHH-----------HTCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHH-----------hCCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 589999999999999999999999999999986 23221 11210 00000000002333455566789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhcccCCCCcEEEEe------cCCCCC---CCCe-e
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH------FFSPAH---VMPL-L 456 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~r~ig~h------~~~p~~---~~~l-v 456 (725)
+|+||.||| .....++++++.+.+.++++|++...++.. +.+.+.+.. .++++.- ...|-. ..+. +
T Consensus 70 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLK--TFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCC--GGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecC--CCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998 555568899999999999999998899874 445554432 2443322 111211 1111 1
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhH
Q 004891 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 499 (725)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~ 499 (725)
.+-..+..+.+..+.+.+++...|....+..|..+.....++.
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~ 189 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVW 189 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHH
Confidence 1222233346778889999999887776667765555555443
No 185
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.77 E-value=6.7e-09 Score=108.89 Aligned_cols=120 Identities=20% Similarity=0.295 Sum_probs=79.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+ .... . .. ...+++. +++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l--------~~~~-~---~~-~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI--------AHAA-P---VS-HGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH--------TTSC-C---TT-SCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh--------hhhh-h---hc-CCeEEEE-CCHHHhC
Confidence 489999999999999999999999 9999999988765321111 1110 0 00 0012332 4668899
Q ss_pred CCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEE--ecCCCCChHHHhcccCCCCcEEEE
Q 004891 387 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTSSQDRIIGA 444 (725)
Q Consensus 387 ~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~--s~tS~~~~~~l~~~~~~~~r~ig~ 444 (725)
+||+||+++ |. +..+++++++++.+++ |+++++ ||.+......+.+.. .++|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999999 32 4557789999999986 666554 444433322333333 56677764
No 186
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.73 E-value=5.5e-09 Score=111.49 Aligned_cols=117 Identities=15% Similarity=0.028 Sum_probs=82.0
Q ss_pred ceEEEEcCCCCcHHHHHHHH-HCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~-~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
++|+|||+|.||.++|..+. ..|++|++||++++..+...+ .| +...+++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-----------LG-------------AERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-----------HT-------------CEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-----------cC-------------cEEeCCHHHHhc
Confidence 58999999999999999999 999999999998765443210 01 2223344 4578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhcccCCC-CcEEEEecCCC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 449 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~~~-~r~ig~h~~~p 449 (725)
+||+|++++|...+.+..+.+++.+.++++++|++.+++ .....+.+.+... -...++++|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987766554445666788999988754444 3334566655432 12367888874
No 187
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.73 E-value=4.7e-08 Score=103.37 Aligned_cols=172 Identities=14% Similarity=0.095 Sum_probs=106.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHH---cCCCCHHHHHHhhcCcccccCcccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT---RGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~---~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
+||+|||+|.||+.+|..|+++|++|++|++++. +...+. .+ .+. .|.. .+..+..+++.+.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~---Gl--~~~~~~~g~~-------~~~~~~~~~~~~~~ 68 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAK---GI--RIRSATLGDY-------TFRPAAVVRSAAEL 68 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHH---CE--EEEETTTCCE-------EECCSCEESCGGGC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhC---Cc--EEeecCCCcE-------EEeeeeeECCHHHc
Confidence 5899999999999999999999999999999862 322110 00 000 0100 00123344566555
Q ss_pred -cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh-HHHhcccCCCCcEEEE-ecC-----CCCCC---CC
Q 004891 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGA-HFF-----SPAHV---MP 454 (725)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~-~~l~~~~~~~~r~ig~-h~~-----~p~~~---~~ 454 (725)
+++|+||.|||.. ...++++++.+.++++++|++...++.. ..+.+.+... ++++. -++ .|-.+ .+
T Consensus 69 ~~~~DlVilavK~~--~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~ 145 (320)
T 3i83_A 69 ETKPDCTLLCIKVV--EGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAY 145 (320)
T ss_dssp SSCCSEEEECCCCC--TTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEecCCC--ChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCC
Confidence 4899999999843 3447888899999999988888888864 4555555433 44332 221 22111 11
Q ss_pred e-eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhh
Q 004891 455 L-LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497 (725)
Q Consensus 455 l-veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl 497 (725)
. +.+-..+..+.+..+.+.+++...|-...+..|..+.....+
T Consensus 146 ~~~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl 189 (320)
T 3i83_A 146 GRLMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKC 189 (320)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHH
T ss_pred CEEEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHH
Confidence 1 112111233456788899999998877777677655444444
No 188
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.71 E-value=2.1e-08 Score=105.10 Aligned_cols=120 Identities=13% Similarity=0.214 Sum_probs=81.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.... . + ...+++.+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~--~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE-L--G---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH-H--T---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh-c--C---------CCeEEEECCCHHHhCCC
Confidence 79999999999999999999898 7999999998876432222211100 0 0 01246666778899999
Q ss_pred CEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccC-----CCCcEEEE
Q 004891 389 DMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-----SQDRIIGA 444 (725)
Q Consensus 389 DlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~-----~~~r~ig~ 444 (725)
|+||++. ..+..+++++.+++.+++ |+++++.. +.|+..+...+. .+.|++|+
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVIT--TNPVDAMTYVMYKKTGFPRERVIGF 140 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--CSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCchHHHHHHHHHhcCCChhhEEEe
Confidence 9999994 455677889999999987 66644432 235554443321 24466664
No 189
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.71 E-value=5.5e-09 Score=110.79 Aligned_cols=117 Identities=12% Similarity=0.050 Sum_probs=81.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|..+...|++|++||++++..+... +.| +... ++ +.+++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQ-------------AEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcC-------------ceeC-CHHHHHhh
Confidence 5899999999999999999999999999999876543321 111 2222 44 45789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhcccC-CCCcEEEEecCCCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFSPA 450 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~-~~~r~ig~h~~~p~ 450 (725)
||+|++++|...+.+..+.+++.+.+++++++++.+++ .....+.+.+. ..-...++++|.|.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 99999999976654443335666778999988744443 23345555543 23345788988654
No 190
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.70 E-value=3.1e-08 Score=103.87 Aligned_cols=107 Identities=21% Similarity=0.238 Sum_probs=73.3
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC--hHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 304 ~~~~~~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~--~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
|.+..+||+|||+|.||.++|..++..|+ +|+++|++ ++.++.....+.+.. .......++..++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~------------~~~~~~~~i~~t~ 71 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS------------PVQGFDANIIGTS 71 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH------------HHHTCCCCEEEES
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh------------hhccCCCEEEEcC
Confidence 44556899999999999999999999999 99999999 444332221121110 0111123566677
Q ss_pred CcccccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 381 DYSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 381 ~~~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
+++++++||+||+++.- +..+.+++.+.+.+++ |+++++..|
T Consensus 72 d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vlvvs 127 (315)
T 3tl2_A 72 DYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHS-PNAIIVVLT 127 (315)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred CHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEECC
Confidence 88999999999999721 3345667777788886 566554433
No 191
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.67 E-value=8.1e-08 Score=100.97 Aligned_cols=99 Identities=19% Similarity=0.243 Sum_probs=70.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC--CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc-ccCccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 384 (725)
|+||+|||+|.||.++|..|+++| ++|++||+++++++.....+.+... ..+ ..+.. ++++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~-----------~~~~~~~~d~~~ 66 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLE-----------AHGNIVINDWAA 66 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSS-----------SCCEEEESCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcC-----------CCeEEEeCCHHH
Confidence 368999999999999999999999 7999999999887665432221110 000 11222 356688
Q ss_pred ccCCCEEEEeccCCh------------------HHHHHHHHHHHHhCCCCeEEEe
Q 004891 385 FKDVDMVIEAVIESV------------------PLKQKIFSELEKACPPHCILAT 421 (725)
Q Consensus 385 l~~aDlVIeavpe~~------------------~~k~~v~~~l~~~~~~~~ii~s 421 (725)
+++||+||+|++... .+.+++++++.++++ +++++.
T Consensus 67 ~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~ 120 (309)
T 1hyh_A 67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVV 120 (309)
T ss_dssp GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEE
T ss_pred hCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEE
Confidence 899999999998643 246788888888774 655544
No 192
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.64 E-value=2.5e-08 Score=104.58 Aligned_cols=103 Identities=19% Similarity=0.258 Sum_probs=76.8
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
++.+||+|||+|.||.++|..++..|+ +|+++|++++.++.....+.+... .. ...++..+++++
T Consensus 19 ~~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~----~~---------~~~~i~~t~d~~ 85 (330)
T 3ldh_A 19 RSYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL----FL---------HTAKIVSGKDYS 85 (330)
T ss_dssp CCCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG----GS---------CCSEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh----cc---------cCCeEEEcCCHH
Confidence 356899999999999999999999998 999999999887654433333211 00 123466678888
Q ss_pred cccCCCEEEEec--------------cCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 384 EFKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 384 ~l~~aDlVIeav--------------pe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
++++||+||++. .++..+++++.+++.+++ |+++++..
T Consensus 86 ~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilvv 137 (330)
T 3ldh_A 86 VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKELH 137 (330)
T ss_dssp SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEeC
Confidence 899999999885 345677888888999985 56655433
No 193
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.64 E-value=7e-09 Score=110.12 Aligned_cols=116 Identities=16% Similarity=0.057 Sum_probs=80.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
-++|+|||+|.||.++|..++..|++|++||++++. +... +.| +.. .++ +.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~~~l~ 203 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-----------ELN-------------AEF-KPLEDLLR 203 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HHC-------------CEE-CCHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-----------hcC-------------ccc-CCHHHHHh
Confidence 368999999999999999999999999999999876 3221 011 122 244 4578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCCC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP 449 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~p 449 (725)
+||+|++|+|...+.+.-+.+++.+.+++++++++.+.+..+. .+.+.+. ..-...++|+|.+
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~ 269 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEE 269 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCC
Confidence 9999999999877554433356667789999886544443333 4444443 2334477898873
No 194
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.63 E-value=4.3e-08 Score=103.11 Aligned_cols=124 Identities=18% Similarity=0.325 Sum_probs=81.0
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (725)
|.++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... - .....++..++++++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~---~---------~~~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP---I---------EGVDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH---H---------HTCCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh---h---------cCCCcEEEEcCCHHH
Confidence 346799999999999999999999998 999999999876533222221110 0 000123555677899
Q ss_pred ccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh----cccCC-CCcEEEE
Q 004891 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----EKTSS-QDRIIGA 444 (725)
Q Consensus 385 l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~----~~~~~-~~r~ig~ 444 (725)
+++||+||.+..- +..+.+++...+.+++ |+++++..| .|+..+. ..... +.|++|+
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt--NPvd~~t~~~~k~sg~p~~rviG~ 146 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICIT--NPLDIMVNMLQKFSGVPDNKIVGM 146 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECC--SSHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEec--CchHHHHHHHHHhcCCCHHHEEee
Confidence 9999999999631 3456667777888887 666655433 3333222 22222 3567765
No 195
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.62 E-value=6.1e-08 Score=101.91 Aligned_cols=104 Identities=19% Similarity=0.227 Sum_probs=73.5
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (725)
++++||+|||+|.||.++|..|+..|+ +|+++|++++.++.....+.+.... .. ...++..++++++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~-~~-----------~~~~v~~t~d~~a 72 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPV-DG-----------FDAKFTGANDYAA 72 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHH-HT-----------CCCCEEEESSGGG
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhh-cC-----------CCCEEEEeCCHHH
Confidence 346799999999999999999999999 9999999998865433223222110 00 0124555678899
Q ss_pred ccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 385 l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+++||+||.++.- +..+.+++...+.+++ |+++++..
T Consensus 73 ~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivv 123 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICI 123 (324)
T ss_dssp GTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred HCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEec
Confidence 9999999999731 3345666667788887 66665543
No 196
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.62 E-value=1.3e-07 Score=99.34 Aligned_cols=100 Identities=18% Similarity=0.149 Sum_probs=69.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.||.++|..|++. |++|++||+++++++.....+.+... ......++..+++++.++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP------------VGLFDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhh------------cccCCcEEEECCCHHHHC
Confidence 3899999999999999999985 78999999999877643211111100 000113466667887799
Q ss_pred CCCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCeEEEe
Q 004891 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILAT 421 (725)
Q Consensus 387 ~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~s 421 (725)
+||+||+|+|.. ..+.+++.+.+.+++ ++++++.
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv 116 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIV 116 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEE
Confidence 999999999632 245567777888886 5554443
No 197
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.60 E-value=1.4e-08 Score=107.42 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=78.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++..+ + .....++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 5799999999999999999999999999999875411 1 1123344 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhcccC-CCCcEEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS 448 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~-~~~r~ig~h~~~ 448 (725)
||+|++++|...+.+.-+-+++.+.++++++|++.+++..+ ..+.+.+. ...+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999976654433334555667899988754444333 35555554 334667888886
No 198
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.59 E-value=1.7e-08 Score=107.02 Aligned_cols=113 Identities=18% Similarity=0.118 Sum_probs=77.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++. +.+.+ .| +... ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~~-----------~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEKE-----------LK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhhh-----------cC-------------ceec-CHHHHHhh
Confidence 58999999999999999999999999999999875 32210 01 1222 34 45789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccCC-CCcEEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~~-~~r~ig~h~~~ 448 (725)
||+|++|+|...+.+..+-+++.+.++++ ++++.+.+..+. .+.+.+.. .-...|+|+|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999977655444434556678888 775443333332 34444433 33568899987
No 199
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.58 E-value=1.5e-07 Score=99.45 Aligned_cols=107 Identities=26% Similarity=0.350 Sum_probs=73.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
++||+|||+|.||..+|..|+++|+ +|+++|++++.++.....+.+.+. . .+ ...+..+++++++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~--~-~~----------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--F-YP----------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--G-ST----------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh--h-cC----------CeEEEeCCCHHHh
Confidence 4699999999999999999999999 999999998776521111111110 0 00 0134444466788
Q ss_pred cCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecCCCCCh
Q 004891 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (725)
Q Consensus 386 ~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (725)
++||+||.+++. +..+.++++.++.++ .++++|++.+.+...
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 999999999931 235666888888887 577777665555443
No 200
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.57 E-value=5.6e-08 Score=102.35 Aligned_cols=111 Identities=20% Similarity=0.253 Sum_probs=73.3
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (725)
.++||+|||+|.||.++|..++..|. +|+++|++++.++.....+.+. ....+. .-++. ++++++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~---~~~~~~---------~~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---KVFAPK---------PVDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---TTSSSS---------CCEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH---hhhcCC---------CeEEE-cCcHHH
Confidence 45799999999999999999998886 8999999987554322222110 000000 01122 345688
Q ss_pred ccCCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhc
Q 004891 385 FKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE 433 (725)
Q Consensus 385 l~~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~ 433 (725)
+++||+||++++ ++..+++++.+.+.+++ |+++++.. +.|+..+..
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~--tNPv~~~~~ 131 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG-FQGLFLVA--TNPVDILTY 131 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT-CCSEEEEC--SSSHHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC-CCCEEEEe--CCchHHHHH
Confidence 999999999953 34478889999999997 55544332 335554443
No 201
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.57 E-value=6.5e-08 Score=105.73 Aligned_cols=106 Identities=16% Similarity=0.110 Sum_probs=75.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-CCCcEEEEe---CChHHHHHHHHHHHHHHHhhHHcC------CCCHHHHHHhhcCcc-
Q 004891 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRG------KLTQDKANNALKMLK- 377 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~-~G~~V~~~d---~~~e~~~~~~~~i~~~l~~~~~~g------~~~~~~~~~~~~~i~- 377 (725)
+||+|||+|.||.++|..|++ +|++|++|| ++++.++.+.+ +.+ ..... ......++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~----------~~g~~~~~~~~~~~-~~~~~~~~~~ 71 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG----------ADELTVIVNEKDGT-QTEVKSRPKV 71 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT----------TSCEEEEEECSSSC-EEEEEECCSE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh----------hccceeeeecCCCc-cceeeccceE
Confidence 589999999999999999998 599999999 87777655321 111 00000 000012333
Q ss_pred cccCc-ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 004891 378 GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (725)
Q Consensus 378 ~~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~ 427 (725)
.++++ +++++||+||+|||. ....++++++.+.++++++|++++++..
T Consensus 72 ~~~~~~~a~~~aD~Vilav~~--~~~~~v~~~l~~~l~~~~ivv~~~~~~G 120 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVPA--FAHEGYFQAMAPYVQDSALIVGLPSQAG 120 (404)
T ss_dssp EESCHHHHHTTCSEEEECSCG--GGHHHHHHHHTTTCCTTCEEEETTCCTT
T ss_pred EeCCHHHHhCCCCEEEEeCch--HHHHHHHHHHHhhCCCCcEEEEcCCCcc
Confidence 45565 457899999999994 4467899999999999999988665554
No 202
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.55 E-value=1.4e-07 Score=101.13 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=72.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCc-ccccCc-ccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDY-SEF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~-~~l 385 (725)
++||+|||+|.||..+|..|+++|++|++||++++.++...+.. ...+...... ....+ ..++++ +.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG----AIIAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT----SEEEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC----CeEEeccccc------cccccceecCCHHHHH
Confidence 46899999999999999999999999999999998876643210 0000000000 00112 234455 447
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+++|+||+|+|... ..++++++.+.++++++|++.
T Consensus 74 ~~~D~vi~~v~~~~--~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 KDADVILIVVPAIH--HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TTCSEEEECSCGGG--HHHHHHHHGGGCCTTCEEEES
T ss_pred hcCCEEEEeCCchH--HHHHHHHHHHhCCCCCEEEEc
Confidence 89999999999554 368889999999999977765
No 203
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.55 E-value=2.2e-07 Score=102.34 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=56.3
Q ss_pred cceEEEEcCCCCc--HHHHHHHHHC----CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 308 VRKVAVIGGGLMG--SGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 308 ~~kIaVIG~G~mG--~~iA~~l~~~----G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
.+||+|||+|.|| .++|..|++. |.+|++||++++.++.........+. ... ...+++.++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~l~----~~~--------~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVE----EVG--------ADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHH----HTT--------CCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHHhc----cCC--------CCcEEEEECC
Confidence 3699999999974 5567788754 88999999999998875543322221 111 1245777888
Q ss_pred c-ccccCCCEEEEecc
Q 004891 382 Y-SEFKDVDMVIEAVI 396 (725)
Q Consensus 382 ~-~~l~~aDlVIeavp 396 (725)
+ +++++||+||++++
T Consensus 71 ~~eal~dAD~VIiaag 86 (480)
T 1obb_A 71 LDDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 7 78999999999995
No 204
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.52 E-value=1e-07 Score=99.60 Aligned_cols=91 Identities=19% Similarity=0.245 Sum_probs=66.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHH------HHHHHHHHhCCC
Q 004891 621 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT------SLKKWSQLYGNF 694 (725)
Q Consensus 621 ~~~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~------~~~~~~~~~~~~ 694 (725)
+-.|.||++.++++||++++++|++ |++|||.+|+.|+|+|...-|||+++|..|++.... .++.+...++
T Consensus 191 pGFi~NRl~~~~~~EA~~lv~eGva-s~edID~~~~~g~g~~~a~mGPf~~~Dl~G~~~~~~~~~~~~~~~~~~~~~~-- 267 (319)
T 3ado_A 191 DGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGMKRVLKSFG-- 267 (319)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCC--
T ss_pred CCEeHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCCCCcchhhhhhhcCccHHHHHHHhhHhHHHHHHHcC--
Confidence 4579999999999999999999999 999999999999998733349999999999764432 2333333333
Q ss_pred CCCCHHHHHHH-HcCCCCCCCC
Q 004891 695 FKPSRFLEERA-TKGIPLSAPV 715 (725)
Q Consensus 695 ~~p~~~l~~~~-~~g~gf~~~~ 715 (725)
..+.+-.++. +.++|||.+.
T Consensus 268 -~~p~~~~~~~~k~~~g~~~~~ 288 (319)
T 3ado_A 268 -SIPEFSGATVEKVNQAMCKKV 288 (319)
T ss_dssp -CCCCCCHHHHHHHHHHHHHHS
T ss_pred -cccccchHHHHHHHHHHhhcC
Confidence 2233333333 4568888873
No 205
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.47 E-value=3.2e-08 Score=102.29 Aligned_cols=124 Identities=10% Similarity=-0.039 Sum_probs=84.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++..+. ....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------------------~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------------------------DVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------------------------SEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----------------------------ccccCChHHHhhc
Confidence 68999999999999999999999999999998754211 1123344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccC-CCCcEEEEecCC-----CCCCCCeeeEe
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFS-----PAHVMPLLEIV 459 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~-~~~r~ig~h~~~-----p~~~~~lveii 459 (725)
||+|+.++|...+...-+-.+..+.++++++++..+.+-. ...+.+.+. ..-...++..|. |.+..+-+-++
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 9999999996666544444667788999999875444433 334444443 233455555543 33444556666
Q ss_pred cC
Q 004891 460 RT 461 (725)
Q Consensus 460 ~~ 461 (725)
|+
T Consensus 254 PH 255 (290)
T 3gvx_A 254 PH 255 (290)
T ss_dssp CS
T ss_pred cc
Confidence 65
No 206
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.45 E-value=5.7e-08 Score=109.50 Aligned_cols=149 Identities=13% Similarity=0.094 Sum_probs=94.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||+++|..+...|++|++||++... +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g-------------~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-----------QLG-------------IELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-----------HHT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHH-----------hcC-------------cEEc-CHHHHHhc
Confidence 68999999999999999999999999999998642 2211 111 1112 33 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH--HhcccCCC-C-----cEEEEecC--CCCCCCCeee
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI--VGEKTSSQ-D-----RIIGAHFF--SPAHVMPLLE 457 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~--l~~~~~~~-~-----r~ig~h~~--~p~~~~~lve 457 (725)
||+|+.|+|.......-+-+++.+.+++++++++.+.+-.+.+ +.+.+... - .|++.||. .|....+-+-
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vi 276 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVV 276 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEE
Confidence 9999999996544333222346677899999886665544443 33443221 1 12233332 1222234466
Q ss_pred EecCCC-CCHHHHHH-----HHHHHHHcCCee
Q 004891 458 IVRTER-TSAQVILD-----LMTVGKIIKKVP 483 (725)
Q Consensus 458 ii~~~~-t~~e~~~~-----~~~l~~~lGk~~ 483 (725)
++|+.. +++++.+. +.++...++..+
T Consensus 277 lTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 277 VTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp ECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 788776 67887765 667777776544
No 207
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.44 E-value=1e-06 Score=86.89 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=94.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.++..+.+.+.+.|..++.++. +.|+| .+.| +++. ....++ +.|..+++||++.
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPG------Gsv~----------------a~~~I~-~~i~~~~~pV~t~ 102 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYINSPG------GSIN----------------EGLAIL-DIFNYIKSDIQTI 102 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEECCC------CCHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 4788889999999998876655 66666 3433 2221 122445 6688899999999
Q ss_pred EcccccchhhHHhhhcCE--EEeeCCceEeCcccccCCCC---Cchh----hc--------hHhhh--hCHHHHHHHHHc
Q 004891 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GFGG----TQ--------RLPRL--VGLSKAIEMMLL 165 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~--~ia~~~a~~~~pe~~~Gl~p---~~g~----~~--------~l~r~--vG~~~a~~l~l~ 165 (725)
+.|.|..+|.-++++||. |+|.+.+.+++.....|... +... .. .+.+. .......+++-.
T Consensus 103 v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~ 182 (215)
T 2f6i_A 103 SFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDR 182 (215)
T ss_dssp EEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHT
T ss_pred EeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhC
Confidence 999999999999999999 99999999987665433210 0000 00 00111 234555566656
Q ss_pred CCCCCHHHHHHcCCcceecCc
Q 004891 166 SKSITSEEGWKLGLIDAVVTS 186 (725)
Q Consensus 166 g~~~~a~eA~~~Glv~~vv~~ 186 (725)
+..++++||++.||||++.+.
T Consensus 183 ~~~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 183 DYYMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp TCEECHHHHHHHTSCSEECCC
T ss_pred CeecCHHHHHHCCCCCEecCC
Confidence 677799999999999999854
No 208
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.43 E-value=2.2e-07 Score=97.91 Aligned_cols=102 Identities=10% Similarity=0.005 Sum_probs=70.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeC-ChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~-~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
++|+|||+|.||.++|..+...|++|++||+ +++.. .+. +.| +...+++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~-----------~~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEA-----------SYQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhh-----------hcC-------------cEEcCCHHHHHh
Confidence 6899999999999999999999999999999 87652 211 111 1222234 5678
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhccc
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKT 435 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~ 435 (725)
+||+|+.++|...+...-+-++..+.++++++++..+++- ....+.+.+
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL 252 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAAL 252 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHH
Confidence 9999999999665533322245667789999987655542 233444444
No 209
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.43 E-value=5.9e-07 Score=93.15 Aligned_cols=102 Identities=18% Similarity=0.273 Sum_probs=69.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.||.++|..|+..|+ +|++||++++.++.....+.+....+ . ....+..++++++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~---~---------~~~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT---T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc---C---------CCCEEEEeCCHHHhC
Confidence 489999999999999999999998 99999999988663222222211100 0 012455566788999
Q ss_pred CCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 387 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 387 ~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
+||+||.+..- +..+.+++.+.+.+++ |+++++..|
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs 118 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT 118 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC
Confidence 99999999732 2234455556677774 666665443
No 210
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.41 E-value=1.9e-06 Score=83.89 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=98.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.++..+.+.+.+.|..++.++..+.|+| .+.|+ ++. ....++ +.|..+++||++.
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG------~v~----------------~~~~I~-~~i~~~~~~V~t~ 91 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGG------SVT----------------AGFAIY-DTIQHIKPDVQTI 91 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCC------CHH----------------HHHHHH-HHHHHhcCCcEEE
Confidence 5889999999999999987766676665 34332 221 122445 6688899999999
Q ss_pred EcccccchhhHHhhhcC--EEEeeCCceEeCcccccCCCCCchh-h---------------chHhhh--hCHHHHHHHHH
Q 004891 105 VEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGG-T---------------QRLPRL--VGLSKAIEMML 164 (725)
Q Consensus 105 v~G~a~GgG~~lalacD--~~ia~~~a~~~~pe~~~Gl~p~~g~-~---------------~~l~r~--vG~~~a~~l~l 164 (725)
+.|.|.++|..++++|| .|++.++++|......-|. -+... . ..+.+. .......+++-
T Consensus 92 ~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~-~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~ 170 (203)
T 3qwd_A 92 CIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA-QGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTD 170 (203)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSST-TTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHT
T ss_pred EeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 99999999999999999 6999999999886554321 11100 0 001111 23455666777
Q ss_pred cCCCCCHHHHHHcCCcceecCcc
Q 004891 165 LSKSITSEEGWKLGLIDAVVTSE 187 (725)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~ 187 (725)
....++|+||++.||||+|+...
T Consensus 171 ~d~~lta~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 171 RDNFLTAEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp SCCCEEHHHHHHHTSCSEECCCC
T ss_pred cCceecHHHHHHcCCcCEecCCc
Confidence 77889999999999999999654
No 211
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.40 E-value=8.3e-07 Score=93.11 Aligned_cols=110 Identities=18% Similarity=0.061 Sum_probs=73.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
+||+|||+|.||+.+|..|+ +|++|++|+++++.++...+ .|......-......+ ..+.+.+.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~-----------~G~~~~~~~~~~~~~~--~~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQS-----------EGIRLYKGGEEFRADC--SADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHH-----------HCEEEEETTEEEEECC--EEESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHh-----------CCceEecCCCeecccc--cccccccCCC
Confidence 58999999999999999999 99999999999987665432 1110000000000001 1112456789
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH-HHhcccC
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTS 436 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~-~l~~~~~ 436 (725)
|+||.||+ .....+++..+.+. .+++ |++...++... .+.+.++
T Consensus 69 D~vilavK--~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~ 113 (307)
T 3ego_A 69 DLLVVTVK--QHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHV 113 (307)
T ss_dssp SEEEECCC--GGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCC
T ss_pred CEEEEEeC--HHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCC
Confidence 99999998 55566777877664 6777 77888888876 4444433
No 212
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.38 E-value=4.7e-07 Score=88.04 Aligned_cols=134 Identities=16% Similarity=0.174 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.++..+.+.+.+.|..++.+++++.|+|. +.|+ ++. ....++ +.|..+++||++.
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG------~v~----------------a~~~I~-~~i~~~~~pV~~~ 90 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG------VIT----------------AGMSIY-DTMQFIKPDVSTI 90 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCC------CHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 47888999999999999877667777773 3332 221 122445 6688899999999
Q ss_pred EcccccchhhHHhhhcCE--EEeeCCceEeCcccccCCCCCchhh-c-----------------hHhhhh--CHHHHHHH
Q 004891 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRLV--GLSKAIEM 162 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~--~ia~~~a~~~~pe~~~Gl~p~~g~~-~-----------------~l~r~v--G~~~a~~l 162 (725)
+.|.|..+|.-++++||. |+|.+++.++......|. .|-. . .+.+.. ......++
T Consensus 91 v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~ 167 (193)
T 1yg6_A 91 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 167 (193)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999 999999998876544321 1110 0 011222 23444455
Q ss_pred HHcCCCCCHHHHHHcCCcceecCc
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTS 186 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~ 186 (725)
+-.+..++++||++.||||++.++
T Consensus 168 ~~~~~~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 168 TERDRFLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp TSSCEEEEHHHHHHHTSSSEECCC
T ss_pred hcCCeEEcHHHHHHcCCCCEecCC
Confidence 445667799999999999999854
No 213
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.36 E-value=4.6e-08 Score=102.13 Aligned_cols=163 Identities=12% Similarity=0.034 Sum_probs=103.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc-cC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l-~~ 387 (725)
+||+|||+|.||+.+|..|+++|++|++|+++++.++. ....|... ..+. .+..+.+ ++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~-----------~~~~g~~~--------~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITY-----------YTVPHAPA--------QDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEE-----------ESSTTSCC--------EEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEE-----------EecCCeec--------ccee-cCchHhcCCC
Confidence 58999999999999999999999999999999654321 00111100 0111 1223444 88
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEE------ecCCCCCCC-CeeeEec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA------HFFSPAHVM-PLLEIVR 460 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~------h~~~p~~~~-~lveii~ 460 (725)
+|+||.||+ .....++++++.+.++++++|++...++...+. +. ..++++. ....|-... ..-.+..
T Consensus 63 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~-~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVK--THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IP-FKNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSC--GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CC-CSCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCC--ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CC-CCcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998 566778889999999999998888888876654 22 2233322 111221110 0011111
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCcchhhhhhhHH
Q 004891 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (725)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~nRl~~a 500 (725)
+ +.+..+.+.+++..-|-...+..|..+.....++..
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N 173 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVN 173 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHH
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHH
Confidence 2 345667777777777766666677666555555443
No 214
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.34 E-value=2.5e-07 Score=97.28 Aligned_cols=113 Identities=10% Similarity=0.065 Sum_probs=77.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 689999999999999999999999999999986542110 011112334 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhcccCC-CCcEEEEecC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFF 447 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~~-~~r~ig~h~~ 447 (725)
||+|+.++|-..+...-+-.+..+.++++++++..+.+ .....+.+.+.. .-...++..|
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~ 254 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVT 254 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSC
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCC
Confidence 99999999976665544446677788999998754433 233355555432 2344555554
No 215
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.34 E-value=7.1e-08 Score=103.43 Aligned_cols=110 Identities=22% Similarity=0.152 Sum_probs=79.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--------cEEEEeCChHHHHH-HHHHHHHHHHhhHHc-CCCCHHHHHHhhcCccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEANVRGLVTR-GKLTQDKANNALKMLKG 378 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--------~V~~~d~~~e~~~~-~~~~i~~~l~~~~~~-g~~~~~~~~~~~~~i~~ 378 (725)
.||+|||+|.||+++|..|+++|+ +|++|.++++...+ ..+.+ ....++ ..+..- .....+..
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~i----n~~~~N~~YLpgv---~Lp~~i~~ 107 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEII----NTRHQNVKYLPGI---TLPDNLVA 107 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHH----TTTCCBTTTBTTC---CCCSSEEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHH----HhcCcCcccCCCC---cCCCCcEE
Confidence 489999999999999999999875 49999998763211 11111 111111 111100 01245777
Q ss_pred ccCc-ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 004891 379 VLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (725)
Q Consensus 379 ~~~~-~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~ 427 (725)
++|+ +++++||+||.+|| .+..+.+++++.+++++++++++.+.++.
T Consensus 108 t~dl~~al~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 108 NPDLIDSVKDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp ESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred eCCHHHHHhcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEeccccc
Confidence 8887 67899999999999 88899999999999999999988887764
No 216
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.33 E-value=8.2e-07 Score=92.87 Aligned_cols=102 Identities=17% Similarity=0.212 Sum_probs=68.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+..... ... .++..++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~-~~~-----------~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIH-GFD-----------TRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHH-TCC-----------CEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccccc-CCC-----------cEEEECCCHHHhC
Confidence 489999999999999999999988 99999999987654322222211100 000 1233356779999
Q ss_pred CCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 387 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 387 ~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
+||+||.+.+- +..+.+++...+.+++ |+++++..|
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt 118 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVA 118 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecC
Confidence 99999999742 2234445556677765 566655433
No 217
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.33 E-value=1.8e-06 Score=91.24 Aligned_cols=111 Identities=16% Similarity=0.108 Sum_probs=66.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++.. .+ .....++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~-------------~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VD-------------WIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SC-------------CEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cC-------------ceecCCHHHHHhc
Confidence 689999999999999999999999999999987530 00 1122344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccCC-CCcEEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~~-~~r~ig~h~~~ 448 (725)
||+|+.++|...+...-+-++..+.++++++++..+.+-.+. .+.+.+.. .-...++..|.
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~ 286 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFV 286 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCS
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcC
Confidence 999999999766655554467778899999987554443333 34444432 22345555553
No 218
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.32 E-value=7.3e-07 Score=93.31 Aligned_cols=114 Identities=17% Similarity=0.099 Sum_probs=74.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++. +.+. +.| +.. .++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-----------EVN-------------GKF-VDLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HTT-------------CEE-CCHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-----------hcC-------------ccc-cCHHHHHhh
Confidence 68999999999999999999999999999999865 2211 111 111 133 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFS 448 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~~ 448 (725)
||+|+.++|...+.+.-+-.+..+.++++++++..+++-.+. .+.+.+. ..-.-.++.+|.
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~ 260 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFE 260 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCC
Confidence 999999999666543322245566789999887555543332 4444443 222334555443
No 219
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.32 E-value=8.8e-07 Score=93.17 Aligned_cols=104 Identities=27% Similarity=0.330 Sum_probs=70.1
Q ss_pred CCCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcc-cccC
Q 004891 305 PRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLD 381 (725)
Q Consensus 305 ~~~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-~~~~ 381 (725)
.+..+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.+... ... ..+. .+++
T Consensus 2 ~~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~-------------~~v~i~~~~ 67 (326)
T 3pqe_A 2 NKHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAP-------------QPVKTSYGT 67 (326)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSS-------------SCCEEEEEC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-ccc-------------CCeEEEeCc
Confidence 3456799999999999999999999998 999999999887654333322110 000 0112 2456
Q ss_pred cccccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 382 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 382 ~~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
++++++||+||.++.. +..+.+++.+.+.+++ |+++++..|
T Consensus 68 ~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvvt 122 (326)
T 3pqe_A 68 YEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASG-FDGIFLVAT 122 (326)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred HHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcC
Confidence 7889999999999832 1234455556677766 566655433
No 220
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.30 E-value=3.3e-07 Score=97.34 Aligned_cols=104 Identities=12% Similarity=0.063 Sum_probs=72.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||+++...+.+.+ .| +...+++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-----------TG-------------AKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-----------HC-------------CEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-----------CC-------------CeEcCCHHHHHhc
Confidence 58999999999999999999999999999998644332211 11 2223344 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~ 436 (725)
||+|+.++|-..+...-+-.+..+.++++++|+..+.+-. ...+.+.+.
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 9999999996555444344566777899999875443332 334444443
No 221
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.30 E-value=6.2e-07 Score=94.37 Aligned_cols=103 Identities=19% Similarity=0.236 Sum_probs=71.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
...+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... -. ....+..+++++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~----~~---------~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL----FL---------KTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG----GC---------SCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh----cc---------CCCeEEEcCCHH
Confidence 356899999999999999999999998 899999998876654333322110 00 012344567888
Q ss_pred cccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 384 ~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
++++||+||.+..- +..+.+++.+.+.+++ |+++++..
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~vlvv 135 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PQCKLLIV 135 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe
Confidence 99999999998621 2345566667788885 55655543
No 222
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.29 E-value=7.6e-07 Score=97.30 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=55.5
Q ss_pred cceEEEEcCCCCc--HHHHHHHHH----CCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 308 VRKVAVIGGGLMG--SGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 308 ~~kIaVIG~G~mG--~~iA~~l~~----~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
..||+|||+|.|| .+++..++. .| +|++||++++.+++... +. + .... ...+++.++|
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~---~-~l~~----------~~~~I~~TtD 68 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IG---N-HSGN----------GRWRYEAVST 68 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HH---T-TSTT----------SCEEEEEESS
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HH---H-HHhc----------cCCeEEEECC
Confidence 3699999999985 799988886 57 99999999998876532 11 1 1111 2246788888
Q ss_pred c-ccccCCCEEEEecc
Q 004891 382 Y-SEFKDVDMVIEAVI 396 (725)
Q Consensus 382 ~-~~l~~aDlVIeavp 396 (725)
+ +++++||+||++++
T Consensus 69 ~~eAl~dADfVI~air 84 (450)
T 3fef_A 69 LKKALSAADIVIISIL 84 (450)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhcCCCEEEeccc
Confidence 8 67899999999995
No 223
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.29 E-value=7.6e-07 Score=94.68 Aligned_cols=114 Identities=11% Similarity=0.068 Sum_probs=75.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||.++|..+...|++|++||++... +.+. +.| +....++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERAR-----------ADG-------------FAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHHH-----------HTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHHH-----------hcC-------------ceEeCCHHHHHhh
Confidence 68999999999999999999999999999998633 2111 111 2223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccC-CCCcEEEEecC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFF 447 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~-~~~r~ig~h~~ 447 (725)
||+|+.++|-..+...-+-.+..+.++++++++..+.+-. ...+.+.+. ..-...++..|
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~ 278 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVF 278 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCC
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEeccc
Confidence 9999999997665544444566778899999875443322 234444443 22233455443
No 224
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.29 E-value=2.1e-06 Score=94.68 Aligned_cols=100 Identities=18% Similarity=0.204 Sum_probs=69.5
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC-----CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 309 ~kIaVIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
+||+|||+|.+ |.++|..|++. +.+|++||+++++++...+.....+.. .+ ...++..++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~---~~---------~~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE---KA---------PDIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH---HC---------TTSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhcc---CC---------CCCEEEEECCH
Confidence 59999999998 55578788887 668999999999877753222211111 11 11356677787
Q ss_pred -ccccCCCEEEEeccCC----------------------------------hHHHHHHHHHHHHhCCCCeEEEe
Q 004891 383 -SEFKDVDMVIEAVIES----------------------------------VPLKQKIFSELEKACPPHCILAT 421 (725)
Q Consensus 383 -~~l~~aDlVIeavpe~----------------------------------~~~k~~v~~~l~~~~~~~~ii~s 421 (725)
+++++||+||.++|-. ..+..++.+++.+++ |+++++.
T Consensus 97 ~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~ 169 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLN 169 (472)
T ss_dssp HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred HHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE
Confidence 7899999999999741 124567777888887 5666653
No 225
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.28 E-value=1.1e-06 Score=91.58 Aligned_cols=109 Identities=11% Similarity=0.021 Sum_probs=74.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++ +. + .....++ +.+++
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHhh
Confidence 6899999999999999999999999999999864 10 1 0112334 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC-CCCcEEEEecC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF 447 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~-~~~r~ig~h~~ 447 (725)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+. .+.+.+. ..-.-.+...|
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~ 237 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVW 237 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCC
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccC
Confidence 999999999765543333246677889999987544443332 3444443 22234566666
No 226
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.26 E-value=2.5e-07 Score=97.16 Aligned_cols=102 Identities=13% Similarity=0.114 Sum_probs=70.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|+.+...|++|++||++++... +. +.| +.. .++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g-------------~~~-~~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AE-----------KIN-------------AKA-VSLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HH-----------HTT-------------CEE-CCHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HH-----------hcC-------------cee-cCHHHHHhh
Confidence 6899999999999999999999999999999986531 11 111 111 133 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~ 436 (725)
||+|+.++|...+...-+-++..+.++++++++..+++-.+. .+.+.+.
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 999999999655432222144556789999887655543333 4455443
No 227
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.25 E-value=3.5e-06 Score=85.43 Aligned_cols=136 Identities=16% Similarity=0.206 Sum_probs=95.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.++..+.+.+.+.|..++.++..+.|+|. +-|+ ++. ....++ +.|...++||++.
T Consensus 90 ~I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGG------sV~----------------ag~aIy-d~I~~~k~pV~t~ 146 (277)
T 1tg6_A 90 PIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGG------VVT----------------AGLAIY-DTMQYILNPICTW 146 (277)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSCSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCC------CHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 48888999999999988765556777763 4332 221 122445 6688899999999
Q ss_pred EcccccchhhHHhhhcCE--EEeeCCceEeCcccccCCCCCchhhc-----------------hHhhh--hCHHHHHHHH
Q 004891 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ-----------------RLPRL--VGLSKAIEMM 163 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~--~ia~~~a~~~~pe~~~Gl~p~~g~~~-----------------~l~r~--vG~~~a~~l~ 163 (725)
+.|.|..+|.-|+++||. |+|.+++.++.....-|. -+. ... .+.+. .......+++
T Consensus 147 v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~-~G~-a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~~ 224 (277)
T 1tg6_A 147 CVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA-RGQ-ATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAM 224 (277)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC-CSS-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_pred EccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc-cCc-HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHH
Confidence 999999999999999999 999999998876543322 110 000 01111 1234555566
Q ss_pred HcCCCCCHHHHHHcCCcceecCcc
Q 004891 164 LLSKSITSEEGWKLGLIDAVVTSE 187 (725)
Q Consensus 164 l~g~~~~a~eA~~~Glv~~vv~~~ 187 (725)
-.+..++++||++.||||+|....
T Consensus 225 drd~~lta~EAle~GLID~I~~~~ 248 (277)
T 1tg6_A 225 ERDRYMSPMEAQEFGILDKVLVHP 248 (277)
T ss_dssp SSCEEECHHHHHHHTSCSEECSSC
T ss_pred hcCcccCHHHHHHCCCCCEecCcc
Confidence 566778999999999999998543
No 228
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.23 E-value=1.4e-06 Score=94.07 Aligned_cols=100 Identities=16% Similarity=0.141 Sum_probs=68.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||+++|..+...|++|++||+++... . .......++ +.+++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~----------------~------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQ----------------Y------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCC----------------B------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhc----------------c------------cCcEecCCHHHHHhh
Confidence 689999999999999999999999999999874320 0 011223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~ 436 (725)
||+|+.++|...+.+.-+-++....++++++++..+.+-. ...+.+.+.
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 9999999997665544333566777899999875444433 335555553
No 229
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.22 E-value=8.6e-06 Score=89.34 Aligned_cols=201 Identities=17% Similarity=0.191 Sum_probs=144.7
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC---C-----------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEcCCCCCcCCCC
Q 004891 3 APRVTMEVG-NDGVAIITLINPP---V-----------NALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGNGGRFSGGFD 66 (725)
Q Consensus 3 ~~~i~~~~~-~~~v~~i~l~~p~---~-----------Nal~~~~~~~l~~~l~~~~-~~~~v~~vVl~g~g~~F~aG~D 66 (725)
|..+...++ ..+++.++...|. . +.....|-.||.+++-.+. +++++...++...|..
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~------ 338 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA------ 338 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH------
Confidence 344555553 4568888887762 1 3334568889977776665 5678999998776642
Q ss_pred chhhhh-------ccCCCcccccchhHHHHHHHHHhhCCCcEEEEE-cccccchh-hHHhhhcCEEEeeC-------Cce
Q 004891 67 INVFQK-------VHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV-EGLALGGG-LELAMGCHARIAAP-------KTQ 130 (725)
Q Consensus 67 l~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav-~G~a~GgG-~~lalacD~~ia~~-------~a~ 130 (725)
..+.. ..+..-+.+...++.+.+ .+|--...-++|.| .|.|+.|- +||+++||..++-+ .+.
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (556)
T 2w3p_A 339 -RHLLAADASLMQHKDHWFVRETIGLLRRTL-ARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPA 416 (556)
T ss_dssp -HHHHHHHHHHHHTTTSHHHHHHHHHHHHHH-HHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCC
T ss_pred -HHHhhhHHHHHhccchHHHHHHHHHHHHHH-HHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCce
Confidence 22211 001111223334455555 55777778889988 68998775 69999999999962 478
Q ss_pred EeCcccccCCCCCchhhchHhhhh-CHHHHHHH--HHcCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcCchh
Q 004891 131 LGLPELTLGVIPGFGGTQRLPRLV-GLSKAIEM--MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207 (725)
Q Consensus 131 ~~~pe~~~Gl~p~~g~~~~l~r~v-G~~~a~~l--~l~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~ 207 (725)
+.+.+.++|..|-..+..||.++. |.....+. ...|+++++++|.++|||+...++-+.++++.-..++-++.||.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (556)
T 2w3p_A 417 ITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDA 496 (556)
T ss_dssp EECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHH
T ss_pred eEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcch
Confidence 999999999999988888887764 44433332 235999999999999999999988899999999999999999987
Q ss_pred hhhh
Q 004891 208 IRSL 211 (725)
Q Consensus 208 ~~~~ 211 (725)
+..+
T Consensus 497 ~~~~ 500 (556)
T 2w3p_A 497 LTGL 500 (556)
T ss_dssp HHHH
T ss_pred hccc
Confidence 7654
No 230
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.20 E-value=7.5e-07 Score=96.51 Aligned_cols=100 Identities=15% Similarity=0.180 Sum_probs=70.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||+.+|..+...|++|++||+++... . +......++ +.+++
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~------------~~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----------------L------------GNATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------C------------TTCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----------------c------------CCceecCCHHHHHhc
Confidence 589999999999999999999999999999975320 0 111223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~ 436 (725)
||+|+.++|...+.+.-+-++..+.++++++++..+.+-.+. .+.+.+.
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 999999999776654433355667789999987544443333 4455443
No 231
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.20 E-value=1.4e-06 Score=91.23 Aligned_cols=109 Identities=16% Similarity=0.098 Sum_probs=73.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++..+ +. ..++ +.+++
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~~ 193 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLKE 193 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHhh
Confidence 6899999999999999999999999999999875411 11 1233 45788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhcccCCCCcEEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFS 448 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~~~~r~ig~h~~~ 448 (725)
||+|+.++|...+...-+-++..+.++++++++..+++-.+. .+.+.+...-.-.++..|.
T Consensus 194 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~ 256 (311)
T 2cuk_A 194 ADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTD 256 (311)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCS
T ss_pred CCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCC
Confidence 999999999665433322134556789999887555443332 4555554212234555553
No 232
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.20 E-value=2.6e-06 Score=90.69 Aligned_cols=137 Identities=8% Similarity=0.047 Sum_probs=84.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||.++|..+...|++|++||++... +.+. +.| +. ..++ +.+++
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~~-----------~~g-------------~~-~~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SMLE-----------ENG-------------VE-PASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHHH-----------HTT-------------CE-ECCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHHh-----------hcC-------------ee-eCCHHHHHhc
Confidence 68999999999999999999999999999998532 1111 111 11 1234 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhcccCCCCcEEEEecCC--C------CCCCCeee
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQDRIIGAHFFS--P------AHVMPLLE 457 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~~~~r~ig~h~~~--p------~~~~~lve 457 (725)
||+|+.++|-..+...-+-.+..+.++++++++..+.+ +....+.+.+....-..++..|. | .+..+-+-
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvi 310 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFI 310 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEE
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEE
Confidence 99999999977665544446677889999998744433 23335555544322124554442 2 12234466
Q ss_pred EecCCC-CCHHHHHH
Q 004891 458 IVRTER-TSAQVILD 471 (725)
Q Consensus 458 ii~~~~-t~~e~~~~ 471 (725)
++|+-. .+.++.+.
T Consensus 311 lTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 311 RSAHRAGALDSAFKK 325 (365)
T ss_dssp ECCSCSSCCHHHHHH
T ss_pred ECCccccCHHHHHHH
Confidence 666433 24444443
No 233
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.19 E-value=9.5e-07 Score=95.02 Aligned_cols=103 Identities=9% Similarity=-0.016 Sum_probs=70.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|+.+...|++|++||++++..+... +.| +....++ +.+++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-----------~~G-------------~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------------LTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-----------hcC-------------ceecCCHHHHHhc
Confidence 5899999999999999999999999999999864432211 011 1112233 56789
Q ss_pred CCEEEEeccCChHHHHHHH-HHHHHhCCCCeEEEecCCCCChH--HHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIF-SELEKACPPHCILATNTSTIDLN--IVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~-~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~~ 436 (725)
||+|+.++|-..+.. .++ ++..+.++++++|+..+.+-.+. .+.+.+.
T Consensus 248 aDvV~l~~Plt~~t~-~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 248 CDVVTLNCPLHPETE-HMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp CSEEEECSCCCTTTT-TCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHH-HHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 999999999655543 333 45667789999887555443333 4555553
No 234
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.18 E-value=5e-07 Score=94.81 Aligned_cols=127 Identities=13% Similarity=0.108 Sum_probs=80.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 689999999999999999999999999999986431110 011112334 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhcccCC-CCcEEEEecCC--------CCCCCCee
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFS--------PAHVMPLL 456 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~~~-~~r~ig~h~~~--------p~~~~~lv 456 (725)
||+|+.++|-..+...-+-.+..+.++++++++..+.+-.+ ..+.+.+.. .-...++..|. |.+..+-+
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nv 274 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNL 274 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTE
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCE
Confidence 99999999965554433334556678999998754444333 344554432 22334454442 22334456
Q ss_pred eEecC
Q 004891 457 EIVRT 461 (725)
Q Consensus 457 eii~~ 461 (725)
-++|+
T Consensus 275 ilTPH 279 (324)
T 3hg7_A 275 IITPH 279 (324)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 66664
No 235
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.16 E-value=7.7e-07 Score=94.19 Aligned_cols=102 Identities=15% Similarity=0.055 Sum_probs=71.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||.++|..+...|++|++||+++...+.. .+ .....++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~g-------------~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------EG-------------AIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------TT-------------CEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------cC-------------CeEeCCHHHHHhh
Confidence 689999999999999999999999999999986432211 01 2223344 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~ 436 (725)
||+|+.++|-..+...-+-++..+.++++++++..+.+- ....+.+.+.
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 278 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEALR 278 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHH
Confidence 999999999766654444356677789999987544332 2334444443
No 236
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=98.15 E-value=3.3e-06 Score=82.15 Aligned_cols=137 Identities=20% Similarity=0.199 Sum_probs=95.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.+++.+.+.+.+.|..++.++..+.|+| .+.| +++. ....++ +.|..+++||++.
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpG------G~v~----------------~~~~I~-~~i~~~~~~v~t~ 94 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG------GMVT----------------AGMGVY-DTMQFIKPDVSTI 94 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC------CCHH----------------HHHHHH-HHHHHhCCCeEEE
Confidence 4889999999999999987666676666 3333 2221 122445 6688899999999
Q ss_pred EcccccchhhHHhhhcCE--EEeeCCceEeCcccccCCCCCchhhc----------h--------Hhhhh--CHHHHHHH
Q 004891 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ----------R--------LPRLV--GLSKAIEM 162 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~--~ia~~~a~~~~pe~~~Gl~p~~g~~~----------~--------l~r~v--G~~~a~~l 162 (725)
+.|.|.++|.-++++||. |++.+++++......-|. .|-.. . +.+.- ......++
T Consensus 95 ~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~ 171 (201)
T 3p2l_A 95 CIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKD 171 (201)
T ss_dssp EEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EcCEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999998 999999998776554221 11110 0 11111 23444455
Q ss_pred HHcCCCCCHHHHHHcCCcceecCc-chH
Q 004891 163 MLLSKSITSEEGWKLGLIDAVVTS-EEL 189 (725)
Q Consensus 163 ~l~g~~~~a~eA~~~Glv~~vv~~-~~l 189 (725)
+-....++|+||++.||||+|++. ++|
T Consensus 172 ~~~~~~lta~EA~e~GliD~I~~~~~~l 199 (201)
T 3p2l_A 172 TDRDNFMMADEAKAYGLIDHVIESREAI 199 (201)
T ss_dssp TSSCEEEEHHHHHHHTSCSEECCCSCC-
T ss_pred hhcCeeecHHHHHHcCCccEecCCHHHh
Confidence 555566799999999999999854 444
No 237
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.13 E-value=1.2e-06 Score=92.44 Aligned_cols=101 Identities=9% Similarity=0.013 Sum_probs=70.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|+.+...|++|++||++++.. .+. ..| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-----------~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSA-----------SFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhh-----------hcC-------------cee-CCHHHHHhc
Confidence 689999999999999999999999999999987542 111 111 111 233 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH--HHhccc
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 435 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~--~l~~~~ 435 (725)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+. .+.+.+
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL 269 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRAL 269 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHH
Confidence 999999999766544333255677889999987555544333 444444
No 238
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.12 E-value=5.2e-06 Score=85.75 Aligned_cols=103 Identities=17% Similarity=0.287 Sum_probs=69.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.+|.++|..|+..+. +++++|++++.++--...+.+.... . + ....+..++++++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~-~--~---------~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG-I--D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG-G--T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc-C--C---------CCCeEecCCCHHHhC
Confidence 589999999999999999998876 8999999987655332223221110 0 0 002344567889999
Q ss_pred CCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 387 DVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 387 ~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
+||+||.+.- .+..+.+++..++.++++ +++++..|.
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p-~aivlvvsN 119 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVVTN 119 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEECSS
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecC
Confidence 9999998872 144456666677877765 555544433
No 239
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.11 E-value=9.3e-07 Score=93.43 Aligned_cols=101 Identities=19% Similarity=0.130 Sum_probs=71.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++.... +.| .... ++ +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceec-CHHHHHhh
Confidence 68999999999999999999999999999998765321 111 1111 23 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~ 436 (725)
||+|+.++|-..+...-+-++..+.++++++++..+.+- ....+.+.+.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 999999999665554444456677889999987444333 2335555553
No 240
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.11 E-value=1.2e-05 Score=84.39 Aligned_cols=109 Identities=20% Similarity=0.268 Sum_probs=71.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
.+||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+.+.. ...... -.++ .++++++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~~~-----------~~v~-~~~~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSPTT-----------VRVK-AGEYSDC 72 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSSSC-----------CEEE-ECCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcCCC-----------eEEE-eCCHHHh
Confidence 3699999999999999999999885 89999999887664322222211 000000 0222 2456889
Q ss_pred cCCCEEEEeccC--Ch------------HHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh
Q 004891 386 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (725)
Q Consensus 386 ~~aDlVIeavpe--~~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (725)
++||+||.+++- +. .+.+++...+.+++ |+++++.. +.|+..+.
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~t 130 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVA--TNPVDILA 130 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHH
Confidence 999999999842 21 45556666777775 56665542 35555444
No 241
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.11 E-value=4.9e-07 Score=95.45 Aligned_cols=102 Identities=17% Similarity=0.115 Sum_probs=71.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|+.+...|++|++||+++...+...+ .| +... ++ +.+++
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~-~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------LG-------------LRQV-ACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------cC-------------ceeC-CHHHHHhh
Confidence 68999999999999999999999999999998743222210 01 1112 33 56788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhccc
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKT 435 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~ 435 (725)
||+|+.++|-..+...-+-++..+.++++++|+..+.+-. ...+.+.+
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 250 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAAL 250 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 9999999996665544444567788899999875444433 33444444
No 242
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.07 E-value=3.2e-06 Score=89.39 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=69.0
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 307 GVRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 307 ~~~kIaVIG~-G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
..+||+|||+ |.+|+++|..++..|. +|+++|+++++++.....+.+.. .. ..++..++++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--------~~-------~~~i~~t~d~~ 71 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--------FE-------GLNLTFTSDIK 71 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--------CT-------TCCCEEESCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--------CC-------CCceEEcCCHH
Confidence 3579999998 9999999999999985 89999999987664333332210 10 1245566676
Q ss_pred ccccCCCEEEEecc--------------CChHHHHHHHHHHHHhCCCCe
Q 004891 383 SEFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHC 417 (725)
Q Consensus 383 ~~l~~aDlVIeavp--------------e~~~~k~~v~~~l~~~~~~~~ 417 (725)
+++++||+||.++. .+..+.+++...+.++++...
T Consensus 72 ~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 67999999999862 234566667777888875553
No 243
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.07 E-value=3.9e-07 Score=95.44 Aligned_cols=101 Identities=12% Similarity=0.072 Sum_probs=70.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 689999999999999999999999999999987542110 000001233 46789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhccc
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKT 435 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~ 435 (725)
||+|+.++|-..+...-+-.+..+.++++++++..+.+- ....+.+.+
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL 243 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAAL 243 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHH
Confidence 999999999666554433366777889999887544332 233454544
No 244
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.05 E-value=5.1e-06 Score=87.22 Aligned_cols=100 Identities=20% Similarity=0.248 Sum_probs=67.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcc-cccCcc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYS 383 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-~~~~~~ 383 (725)
..+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.+... .+..+. .+.+++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~---------------~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP---------------FTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG---------------GSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh---------------hcCCcEEEECcHH
Confidence 45799999999999999999999988 899999998876644322222110 001222 244578
Q ss_pred cccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 384 ~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
++++||+||.+..- +..+.+++.+.+.+++ |+++++..
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvv 124 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA 124 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTT-CCSEEEEC
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEc
Confidence 99999999998631 2334556666777776 46665543
No 245
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=98.05 E-value=1.4e-06 Score=92.44 Aligned_cols=102 Identities=14% Similarity=0.029 Sum_probs=69.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|..+...|++|++||++++... .. ..| +....++ +.+++
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGV-ER-----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTH-HH-----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhh-Hh-----------hcC-------------CeecCCHHHHHhc
Confidence 5899999999999999999999999999999764311 00 001 1112233 55788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh--HHHhccc
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~--~~l~~~~ 435 (725)
||+|+.++|...+.+.-+-++..+.++++++++..+++-.+ ..+.+.+
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 273 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQAL 273 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHH
Confidence 99999999965544333325566778999988755554333 3444444
No 246
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=98.04 E-value=1.3e-06 Score=93.45 Aligned_cols=104 Identities=15% Similarity=0.066 Sum_probs=71.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCc-EEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~-V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
++|+|||+|.||.++|..+...|++ |++||+++...+... +.| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcC-------------cEecCCHHHHHh
Confidence 5899999999999999999999997 999999875433221 111 1222344 5578
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhcccC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~ 436 (725)
+||+|+.++|...+...-+-++..+.++++++|+..+.+- ....+.+.+.
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 9999999999765543333345667789999887544442 2334555443
No 247
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.02 E-value=7.4e-06 Score=86.01 Aligned_cols=63 Identities=21% Similarity=0.265 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHhcCCCCCCCchhHHHHHhCHHHHHHHHHHH
Q 004891 623 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKW 687 (725)
Q Consensus 623 ~i~~r~~~~~~~ea~~~l~~gi~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~ 687 (725)
.+.||++.++++||+.++++|++ |+++||.++..|+|+|..--|||+++|..| +.+.+.++++
T Consensus 193 fi~Nrll~a~~~EA~~l~~~g~~-~~~~id~a~~~g~g~~~a~~GP~~~~dl~g-~g~~~~~~~~ 255 (319)
T 2dpo_A 193 FVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNA-EGMLSYSDRY 255 (319)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTT-TSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCccccCHHHHHHhcC-chHHHHHHHH
Confidence 58999999999999999999999 999999999999998732339999999996 5555555444
No 248
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.02 E-value=3.8e-06 Score=88.32 Aligned_cols=119 Identities=23% Similarity=0.327 Sum_probs=72.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCC-CCHHHHHHhhcCcccccCccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~-~~~~~~~~~~~~i~~~~~~~~ 384 (725)
.+||+|||+|.+|.++|..++..|+ +|+++|+++++++.....+ .... .. .--+++. +++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl--------~~~~~~~------~~~~i~~-~~~~a 71 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDI--------NHGLPFM------GQMSLYA-GDYSD 71 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHH--------TTSCCCT------TCEEEC---CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHH--------HHhHHhc------CCeEEEE-CCHHH
Confidence 4689999999999999999999998 9999999987765321111 1110 00 0012332 45688
Q ss_pred ccCCCEEEEeccCCh--------------HHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhccc----C-CCCcEEEE
Q 004891 385 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 444 (725)
Q Consensus 385 l~~aDlVIeavpe~~--------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~----~-~~~r~ig~ 444 (725)
+++||+||.+++... .+.+++.+.+.+++ |+++++.. +.|+..+.... . .+.|++|+
T Consensus 72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEecc
Confidence 999999999986322 22456667788885 56665542 45555443322 2 23466664
No 249
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=98.02 E-value=2.3e-06 Score=90.50 Aligned_cols=101 Identities=14% Similarity=-0.009 Sum_probs=69.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|+.+...|++|++||++++.. ..+ . +....++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~~--------~-----------------~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--LEK--------K-----------------GYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHH--------T-----------------TCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--HHh--------h-----------------CeecCCHHHHHhh
Confidence 689999999999999999999999999999987653 100 0 1112233 45788
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~ 436 (725)
||+|+.++|...+...-+-++..+.++++++++..+++-. ...+.+.+.
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999997665433222455667899998875554432 334545443
No 250
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.01 E-value=4.2e-06 Score=87.83 Aligned_cols=89 Identities=11% Similarity=0.106 Sum_probs=63.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
++|+|||+|.||..++..|++. |+ +|++||++++++++..+.+ +. .+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------~~-----------~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------QG-----------EVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------SS-----------CCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------hC-----------CeEEeCCHHHHH
Confidence 5799999999999999999886 77 8999999999877653210 10 13334455 567
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
++||+||.|+|... .++.. +.++++++|++.++
T Consensus 195 ~~aDiVi~atp~~~----~v~~~--~~l~~g~~vi~~g~ 227 (312)
T 2i99_A 195 AGADVIITVTLATE----PILFG--EWVKPGAHINAVGA 227 (312)
T ss_dssp TTCSEEEECCCCSS----CCBCG--GGSCTTCEEEECCC
T ss_pred hcCCEEEEEeCCCC----cccCH--HHcCCCcEEEeCCC
Confidence 89999999998532 23322 46788888876433
No 251
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.00 E-value=2.3e-05 Score=71.75 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=64.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCC-HHHHHHhhcCcccccCcccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~l 385 (725)
.+++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+.+. ....-.+..+ .+.... ..+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~-----------~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRS-----------LDL 68 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHH-----------SCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHh-----------CCc
Confidence 35789999999999999999999999999999999887665320 0000011111 110000 135
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (725)
.++|+||.+++ +.+....+...+.+.. ...+++...+....
T Consensus 69 ~~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~ 109 (141)
T 3llv_A 69 EGVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKK 109 (141)
T ss_dssp TTCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGH
T ss_pred ccCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHH
Confidence 78999999998 4444444444444444 55666655444333
No 252
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.00 E-value=1.8e-05 Score=86.92 Aligned_cols=100 Identities=22% Similarity=0.252 Sum_probs=69.1
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC-----CCcEEEEeCCh--HHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 309 ~kIaVIG~G~m-G~~iA~~l~~~-----G~~V~~~d~~~--e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
+||+|||+|.+ |.+++..|++. +.+|++||+++ ++++...+.....++ ..+. ...+..++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~~~~~~~~---~~~~---------~~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVE---KAGV---------PIEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHH---HTTC---------CCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHHHHHHHHh---hcCC---------CcEEEEeC
Confidence 59999999998 77778788873 56899999999 887764322211111 1110 12466677
Q ss_pred Cc-ccccCCCEEEEeccCC----------------------------------hHHHHHHHHHHHHhCCCCeEEEe
Q 004891 381 DY-SEFKDVDMVIEAVIES----------------------------------VPLKQKIFSELEKACPPHCILAT 421 (725)
Q Consensus 381 ~~-~~l~~aDlVIeavpe~----------------------------------~~~k~~v~~~l~~~~~~~~ii~s 421 (725)
|+ +++++||+||.+++-. ..+..++.+++.+++ |+++++.
T Consensus 76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~-P~a~ii~ 150 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN 150 (450)
T ss_dssp CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHC-CCeEEEE
Confidence 87 7899999999999731 134567777888887 5666653
No 253
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.99 E-value=1.2e-06 Score=92.74 Aligned_cols=111 Identities=17% Similarity=0.099 Sum_probs=74.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..+...|++|++||++++.. .+. ..... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~-------------~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEP-------------FLTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTT-------------TCEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhc-------------ccccc-CHHHHHhc
Confidence 689999999999999999999999999999987530 000 11112 34 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC--ChHHHhcccC-CCCcEEEEecC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS-SQDRIIGAHFF 447 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~--~~~~l~~~~~-~~~r~ig~h~~ 447 (725)
||+|+.++|-..+...-+-.+..+.++++++++..+.+- ....+.+.+. ..-...++..|
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~ 263 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTL 263 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCC
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEeccc
Confidence 999999999665544444456667789999987544432 2334444443 22233555544
No 254
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.98 E-value=4.3e-05 Score=69.38 Aligned_cols=97 Identities=19% Similarity=0.182 Sum_probs=61.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCC-CHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
++|.|+|+|.||..+|..|.+.|++|+++|++++.++...+. ..-..-.+.. +.... ....+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~----~~~~~~~~d~~~~~~l-----------~~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE----IDALVINGDCTKIKTL-----------EDAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH----CSSEEEESCTTSHHHH-----------HHTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh----cCcEEEEcCCCCHHHH-----------HHcCccc
Confidence 589999999999999999999999999999999876554210 0000000101 00000 0023678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+|+||.|+|.+. ....+..+.+.+.++.+++..
T Consensus 70 ~d~vi~~~~~~~--~~~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 70 ADMYIAVTGKEE--VNLMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp CSEEEECCSCHH--HHHHHHHHHHHTTCCCEEEEC
T ss_pred CCEEEEeeCCch--HHHHHHHHHHHcCCCEEEEEe
Confidence 999999998542 223344455556777777643
No 255
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.95 E-value=3.4e-05 Score=86.63 Aligned_cols=160 Identities=14% Similarity=0.041 Sum_probs=106.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.-++.+...+.+..+++.+.+. .+-+|.|.- |+|+.+.+-...... ...+.... ..+ ..+....+|+|++
T Consensus 118 gGs~g~~~~~Ki~r~~e~A~~~-~lPvI~l~d-----SgGArlqe~~~~l~~--~~~~g~i~-~~~-~~ls~~giP~Isv 187 (587)
T 1pix_A 118 AGAWVPGQAECLLRASDTAKTL-HVPLVYVLN-----CSGVKFDEQEKVYPN--RRGGGTPF-FRN-AELNQLGIPVIVG 187 (587)
T ss_dssp TTEECTTHHHHHHHHHHHHHHH-TCCEEEEEC-----CCEECGGGHHHHSSS--TTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEe-----CCCCCccccchhccc--cccHHHHH-HHH-HHHhCCCCCEEEE
Confidence 4688899999999999988865 456777764 456666553321110 01122222 223 3477889999999
Q ss_pred EcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHHHHHHHH-HcCCCCCHHH-------HH
Q 004891 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM-LLSKSITSEE-------GW 175 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~-l~g~~~~a~e-------A~ 175 (725)
|.|.|.|||... ..||++|+++. +.+++.-.. ++- ...---.++..+|.+++ .+|+.+++++ +.
T Consensus 188 v~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~--vi~----~~~~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~ 260 (587)
T 1pix_A 188 IYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG--IMG----GMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYT 260 (587)
T ss_dssp ECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT--TCC----SCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTT
T ss_pred EecCCcHHHHHH-HhcCceEEecCCcEEEecCHH--HHh----hhccccccchhHHHHHHHHhCCccChhhcccHHHHHh
Confidence 999999999999 99999999864 888873211 000 00001127899999999 8999888665 23
Q ss_pred HcCCcceecCcchHHHHHHHHHHHHHhcC
Q 004891 176 KLGLIDAVVTSEELLKVSRLWALDIAARR 204 (725)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (725)
+.|++|.+++.++ .+.+.++++.+..
T Consensus 261 ~~GvvD~vv~~e~---~a~~~~r~~ls~l 286 (587)
T 1pix_A 261 ETGFMREVYASEE---GVLEGIKKYVGML 286 (587)
T ss_dssp TSCCSCEEESSHH---HHHHHHHHHHHTS
T ss_pred hcCceeEecCCHH---HHHHHHHHHHHhC
Confidence 6999999997765 4455555554443
No 256
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.89 E-value=1.9e-05 Score=82.89 Aligned_cols=106 Identities=21% Similarity=0.219 Sum_probs=70.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc-ccCcccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~l 385 (725)
.||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. . ....++. .++++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----A-----------FTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----G-----------GSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH----H-----------hcCCeEEEECCHHHh
Confidence 689999999999999999999887 89999999988764332222111 0 0011222 2456889
Q ss_pred cCCCEEEEeccCC--------------hHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh
Q 004891 386 KDVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (725)
Q Consensus 386 ~~aDlVIeavpe~--------------~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (725)
++||+||.+++-. ..+.+++.+.+.+++ |+++++.. +.|+..+.
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t 128 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVA--ANPVDILT 128 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEe--CCcHHHHH
Confidence 9999999998421 145555666777775 56655543 44544333
No 257
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.87 E-value=2.1e-06 Score=91.52 Aligned_cols=112 Identities=13% Similarity=0.027 Sum_probs=73.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||+++|..+...|++|++||++.+.. . . ... ..++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~---------------~-~------------~~~-~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAAR---------------G-D------------EGD-FRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHT---------------T-C------------CSC-BCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHh---------------c-c------------Ccc-cCCHHHHHhh
Confidence 689999999999999999999999999999754321 0 0 011 2334 56789
Q ss_pred CCEEEEeccCChH----HHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCC-CCcEEEEecCCC
Q 004891 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSP 449 (725)
Q Consensus 388 aDlVIeavpe~~~----~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~-~~r~ig~h~~~p 449 (725)
||+|+.++|-..+ ...-+-.+..+.++++++++..+.+-. ...+.+.+.. .-...++..|.+
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~ 239 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEG 239 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTT
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeecccc
Confidence 9999999996554 333333456677899999874443332 3355555533 334455655543
No 258
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.86 E-value=2.1e-05 Score=82.24 Aligned_cols=107 Identities=19% Similarity=0.235 Sum_probs=69.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC--CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~ 386 (725)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+.+.. ... . --.++. +++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~----~~~--~-------~~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT----PFA--H-------PVWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG----GGS--C-------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH----hhc--C-------CeEEEE-CCHHHhC
Confidence 48999999999999999999987 489999999887764322221110 000 0 012332 4578899
Q ss_pred CCCEEEEeccC--C------------hHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh
Q 004891 387 DVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (725)
Q Consensus 387 ~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (725)
+||+||.+++- + ..+.+++.+.+.+++ |+++++.. +.|+..+.
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t 123 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAA-PEAVLLVA--TNPVDVMT 123 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--SSSHHHHH
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHC-CCcEEEEe--cCchHHHH
Confidence 99999998742 2 345566667788885 55555443 44544333
No 259
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.85 E-value=2.1e-05 Score=82.84 Aligned_cols=107 Identities=19% Similarity=0.228 Sum_probs=70.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc-ccCccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~--~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 384 (725)
..||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. . ....+.. .+++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~i~~~~~~a 73 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----P-----------FTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----H-----------hcCCeEEEECCHHH
Confidence 3699999999999999999998887 89999999988764332221110 0 0012222 245688
Q ss_pred ccCCCEEEEeccCC--h------------HHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh
Q 004891 385 FKDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (725)
Q Consensus 385 l~~aDlVIeavpe~--~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (725)
+++||+||.+++-. . .+.+++...+.+++ |+++++.. +.|+..+.
T Consensus 74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t 132 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVA--ANPVDILT 132 (326)
T ss_dssp GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEEC--SSSHHHHH
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCcHHHHH
Confidence 99999999998421 1 44555666777876 55655443 44544333
No 260
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.83 E-value=3.4e-06 Score=89.23 Aligned_cols=100 Identities=13% Similarity=0.011 Sum_probs=69.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|+.+...|++|++||++++.. . + ..... .++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~-~~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D------------H-------------PDFDY-VSLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C------------C-------------TTCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h------------H-------------hcccc-CCHHHHHhc
Confidence 689999999999999999999999999999986431 0 0 00111 233 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~ 436 (725)
||+|+.++|...+...-+-.+..+.++++++++..+++-. ...+.+.+.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999997665544332556677899998875444433 335555554
No 261
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.82 E-value=3.4e-06 Score=90.18 Aligned_cols=110 Identities=10% Similarity=0.046 Sum_probs=71.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||+|.||.++|..+...|++|++||++.+.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 589999999999999999999999999999865421 001 11 1233 45789
Q ss_pred CCEEEEeccCChH----HHHHHHHHHHHhCCCCeEEEecCCCCC--hHHHhcccCCC-CcEEEEecC
Q 004891 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQ-DRIIGAHFF 447 (725)
Q Consensus 388 aDlVIeavpe~~~----~k~~v~~~l~~~~~~~~ii~s~tS~~~--~~~l~~~~~~~-~r~ig~h~~ 447 (725)
||+|+.++|-..+ ...-+-++..+.++++++++..+.+-. ...+.+.+... -.-.++..|
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~ 234 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVW 234 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCC
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeee
Confidence 9999999986554 333222456677899998874444322 23455554332 233444444
No 262
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.79 E-value=8.4e-06 Score=75.15 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=52.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..++..|...|++|+++|+++++++...+.+ + ......++. +.+++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----------~-----------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----------E-----------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----------T-----------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----------C-----------CceEeecCHHHHhcC
Confidence 5899999999999999999999999999999998876543211 0 011122333 55688
Q ss_pred CCEEEEeccCC
Q 004891 388 VDMVIEAVIES 398 (725)
Q Consensus 388 aDlVIeavpe~ 398 (725)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999854
No 263
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.73 E-value=0.00015 Score=66.35 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=59.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+.+. ....-.|..+..+.-. ...+.++
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~-----g~~~i~gd~~~~~~l~----------~a~i~~a 72 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELRER-----GVRAVLGNAANEEIMQ----------LAHLECA 72 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT-----TCEEEESCTTSHHHHH----------HTTGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc-----CCCEEECCCCCHHHHH----------hcCcccC
Confidence 589999999999999999999999999999999987765320 0000001111000000 0235789
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEE
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (725)
|+||.+++++..... +...+....+.-.|++
T Consensus 73 d~vi~~~~~~~~n~~-~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 73 KWLILTIPNGYEAGE-IVASARAKNPDIEIIA 103 (140)
T ss_dssp SEEEECCSCHHHHHH-HHHHHHHHCSSSEEEE
T ss_pred CEEEEECCChHHHHH-HHHHHHHHCCCCeEEE
Confidence 999999997654432 2333434333334554
No 264
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.72 E-value=5.2e-05 Score=66.60 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=36.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-CcEEEEeCChHHHHHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKG 347 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~ 347 (725)
+++|.|+|+|.||..++..|.+.| ++|+++|++++.++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 578999999999999999999999 9999999999886653
No 265
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.72 E-value=2.1e-05 Score=80.90 Aligned_cols=91 Identities=14% Similarity=0.136 Sum_probs=63.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||.++|..|.+.|++|+++|+++++++...+. .+ +...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~----------~g-------------~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK----------FP-------------LEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT----------SC-------------EEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----------cC-------------CeeehhHHhhhcC
Confidence 589999999999999999999999999999998876543210 01 2222244 56789
Q ss_pred CCEEEEeccCChHHH-HHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLK-QKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k-~~v~~~l~~~~~~~~ii~s~tS 424 (725)
+|+||.|+|...... ...+. .+.+++++++++..+
T Consensus 187 aDiVi~atp~~~~~~~~~~i~--~~~l~~g~~viDv~~ 222 (275)
T 2hk9_A 187 VQVIVNTTSVGLKDEDPEIFN--YDLIKKDHVVVDIIY 222 (275)
T ss_dssp CSEEEECSSTTSSTTCCCSSC--GGGCCTTSEEEESSS
T ss_pred CCEEEEeCCCCCCCCCCCCCC--HHHcCCCCEEEEcCC
Confidence 999999998654210 00111 245778888876555
No 266
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.71 E-value=9.4e-05 Score=67.52 Aligned_cols=86 Identities=19% Similarity=0.150 Sum_probs=60.5
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 308 ~~kIaVIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
-++|+|||+ |.||..++.+|.+.|++|+.+|++.+.+ ..+....+++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~~ 64 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSVR 64 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSGG
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCHH
Confidence 368999999 9999999999999999876666653221 1233444553
Q ss_pred -cccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC
Q 004891 384 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (725)
Q Consensus 384 -~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (725)
....+|++|.++| .+...+++.++.+ .....++. .+++.
T Consensus 65 el~~~vDlvii~vp--~~~v~~v~~~~~~-~g~~~i~~-~~~~~ 104 (138)
T 1y81_A 65 ELPKDVDVIVFVVP--PKVGLQVAKEAVE-AGFKKLWF-QPGAE 104 (138)
T ss_dssp GSCTTCCEEEECSC--HHHHHHHHHHHHH-TTCCEEEE-CTTSC
T ss_pred HhCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEE-cCccH
Confidence 3467999999999 5666777777665 44566654 34444
No 267
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.70 E-value=4.6e-06 Score=88.19 Aligned_cols=100 Identities=15% Similarity=0.042 Sum_probs=68.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|+.+...|++|++||++++.. . + ..+. ..++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~-~~~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I------------E-------------DYCT-QVSLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C------------T-------------TTCE-ECCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H------------H-------------hccc-cCCHHHHHhh
Confidence 689999999999999999999999999999986531 0 0 0011 1233 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC--CChHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~--~~~~~l~~~~~ 436 (725)
||+|+.++|...+...-+-.+..+.++++++++..+.+ .....+.+.+.
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 99999999965543332224556678999988744433 22334555443
No 268
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=97.70 E-value=0.00023 Score=68.93 Aligned_cols=143 Identities=15% Similarity=0.104 Sum_probs=94.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEE--EEEcCCCC----CcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCc
Q 004891 27 ALAIPIVAGLKDKFEEATSRDDVKAI--VLTGNGGR----FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100 (725)
Q Consensus 27 al~~~~~~~l~~~l~~~~~~~~v~~v--Vl~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp 100 (725)
.++.++...+...|..++.++..+-| -|.+.|.. ...-+|+ .....++ +.|...+.|
T Consensus 36 ~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v----------------~aglaIy-d~m~~~~~~ 98 (205)
T 4gm2_A 36 PIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI----------------TDVISIV-DVINYISSD 98 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHH----------------HHHHHHH-HHHHHSSSC
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCH----------------HHHHHHH-HHHHhcCCC
Confidence 48899999999999988854433333 33444411 0000111 1233555 678889999
Q ss_pred EEEEEcccccchhhHHhhhcC--EEEeeCCceEeCcccccCCCCCchhhc-----------------hHhhhh--CHHHH
Q 004891 101 IVAAVEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQ-----------------RLPRLV--GLSKA 159 (725)
Q Consensus 101 ~Iaav~G~a~GgG~~lalacD--~~ia~~~a~~~~pe~~~Gl~p~~g~~~-----------------~l~r~v--G~~~a 159 (725)
|...+-|.|.+.|.-|++++| .|++.+.+++.+-...-|.. .+-.+. .+.+.- .....
T Consensus 99 V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~-~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I 177 (205)
T 4gm2_A 99 VYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIP-FNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVI 177 (205)
T ss_dssp EEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCC-SSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHHH
T ss_pred EEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCccccc-ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 999999999999999999999 59999999987765554431 111110 011111 23444
Q ss_pred HHHHHcCCCCCHHHHHHcCCcceecCcc
Q 004891 160 IEMMLLSKSITSEEGWKLGLIDAVVTSE 187 (725)
Q Consensus 160 ~~l~l~g~~~~a~eA~~~Glv~~vv~~~ 187 (725)
.+++-....++|+||++.||||+|++.+
T Consensus 178 ~~~m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 178 SNVLERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp HHHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred HHHhcCCcccCHHHHHHcCCccEeecCC
Confidence 5556667778999999999999998653
No 269
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.69 E-value=0.00012 Score=70.05 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V~~~d~~~e~~~~~ 347 (725)
++|.|+|+|.||..+|..|.+. |++|+++|++++.++.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 5799999999999999999999 99999999999887654
No 270
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.69 E-value=0.00016 Score=82.40 Aligned_cols=144 Identities=17% Similarity=0.102 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCC-CCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEEEccccc
Q 004891 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG-FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110 (725)
Q Consensus 32 ~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 110 (725)
...++.+.|+.+++|+.++.|+|.-. |-| +++.... .+.+.+ +.+....|||||.+++ +.
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~-------------~I~~~i-~~~k~~gkpvva~~~~-aa 131 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQ-------------YIGKAL-KEFRDSGKPVYAVGEN-YS 131 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHH-------------HHHHHH-HHHHHTTCCEEEEESC-EE
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHH-------------HHHHHH-HHHHhcCCeEEEEEcc-ch
Confidence 46788999999999999999999643 112 4443221 122334 3355567999999876 67
Q ss_pred chhhHHhhhcCEEEeeCCceEeCccccc------------CCCC---------Cchhh-----------chH--------
Q 004891 111 GGGLELAMGCHARIAAPKTQLGLPELTL------------GVIP---------GFGGT-----------QRL-------- 150 (725)
Q Consensus 111 GgG~~lalacD~~ia~~~a~~~~pe~~~------------Gl~p---------~~g~~-----------~~l-------- 150 (725)
.+|+-|+++||.+++.+.+.++...+.. |+-+ ..+-. ..+
T Consensus 132 s~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~ 211 (593)
T 3bf0_A 132 QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 211 (593)
T ss_dssp HHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999988766542 2210 00000 001
Q ss_pred ---------hhhhCHHHHHHHHHc-------CCCCCHHHHHHcCCcceecCcchHHHHHH
Q 004891 151 ---------PRLVGLSKAIEMMLL-------SKSITSEEGWKLGLIDAVVTSEELLKVSR 194 (725)
Q Consensus 151 ---------~r~vG~~~a~~l~l~-------g~~~~a~eA~~~Glv~~vv~~~~l~~~a~ 194 (725)
.|-+......+++-. +..++|++|++.||||++...+++.+...
T Consensus 212 ~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~ 271 (593)
T 3bf0_A 212 QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALT 271 (593)
T ss_dssp HHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 111222333334443 79999999999999999997666555443
No 271
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.60 E-value=0.00011 Score=76.24 Aligned_cols=87 Identities=22% Similarity=0.276 Sum_probs=60.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|+.+...|.+|++||++++..+.+. +.|. ..+. ..++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-----------EMGM----------EPFH-ISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTS----------EEEE-GGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HCCC----------eecC-hhhHHHHhcC
Confidence 6899999999999999999999999999999987654321 1110 0000 1223 45789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+|+||.++|..+--. +..+.++++.+++..
T Consensus 214 aDvVi~~~p~~~i~~-----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 214 VDVCINTIPALVVTA-----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp CSEEEECCSSCCBCH-----HHHHHSCTTCEEEEC
T ss_pred CCEEEECCChHHhCH-----HHHHhcCCCCEEEEe
Confidence 999999998533211 223456788877643
No 272
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.60 E-value=0.00013 Score=66.45 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=35.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
+++|.|+|+|.+|..++..|.+.|++|+++|++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNA 44 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 467999999999999999999999999999999877554
No 273
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.56 E-value=5.7e-05 Score=78.75 Aligned_cols=87 Identities=20% Similarity=0.213 Sum_probs=59.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|+.+...|++|++||+++++.+... +.|. ..+. ..++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT-----------EMGL----------VPFH-TDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTC----------EEEE-GGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCC----------eEEc-hhhHHHHhhC
Confidence 6899999999999999999999999999999987654321 1110 0001 1233 55789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
||+||.++|..+-- ++..+.++++++++..
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILDL 245 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEEC
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEEE
Confidence 99999999953221 1233456777776543
No 274
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.56 E-value=0.00011 Score=67.76 Aligned_cols=101 Identities=12% Similarity=0.036 Sum_probs=65.1
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCCh--HHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 309 ~kIaVIG~----G~mG~~iA~~l~~~G~~V~~~d~~~--e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
++|+|||+ |.||..++.+|.+.|++|+.+|++. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 57999999 8999999999999999977777654 211 123334455
Q ss_pred cc-ccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhccc-CCCCcEEE
Q 004891 383 SE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIG 443 (725)
Q Consensus 383 ~~-l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~-~~~~r~ig 443 (725)
++ ...+|+|+.|+| .....+++.++.+ .....+++. +++.. .++.+.. ...-+++|
T Consensus 65 ~el~~~~Dlvii~vp--~~~v~~v~~~~~~-~g~~~i~i~-~~~~~-~~l~~~a~~~Gi~~ig 122 (145)
T 2duw_A 65 ADVPEKVDMVDVFRN--SEAAWGVAQEAIA-IGAKTLWLQ-LGVIN-EQAAVLAREAGLSVVM 122 (145)
T ss_dssp TTCSSCCSEEECCSC--STHHHHHHHHHHH-HTCCEEECC-TTCCC-HHHHHHHHTTTCEEEC
T ss_pred HHcCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEEc-CChHH-HHHHHHHHHcCCEEEc
Confidence 33 467999999999 3555667776655 345566553 45543 3444333 23334443
No 275
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.54 E-value=0.00018 Score=75.03 Aligned_cols=107 Identities=18% Similarity=0.298 Sum_probs=66.8
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC--cEEEEeC--ChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 309 RKVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 309 ~kIaVIG-~G~mG~~iA~~l~~~G~--~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
+||+|+| +|.+|.+++..|+..|+ +++++|+ ++++++.....+.+... . ... -.++. ++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~-~-~~~-----------~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA-Y-DSN-----------TRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT-T-TCC-----------CEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh-h-CCC-----------cEEEe-CCHH
Confidence 4899999 99999999999999886 7999999 87765432222211110 0 000 01222 3467
Q ss_pred cccCCCEEEEecc--CC------------hHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHh
Q 004891 384 EFKDVDMVIEAVI--ES------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (725)
Q Consensus 384 ~l~~aDlVIeavp--e~------------~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~ 432 (725)
++++||+||.+.. .. ..+.+.+.+.+.++. ++++++. ++.|+..+.
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv--~SNPv~~~~ 126 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLT--TSNPVDLLN 126 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEE--CCSSHHHHH
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEE--eCChHHHHH
Confidence 8999999999873 11 135556666777764 5565543 344554333
No 276
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.54 E-value=0.00012 Score=68.18 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=35.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 68999999999999999999999999999999887544
No 277
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.51 E-value=0.00013 Score=74.38 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=49.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccCC
Q 004891 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~a 388 (725)
+|+|||+|.||.++|..|.+.|++|+++|+++++++...+.+ + .. .+++ +. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~----------~-------------~~-~~~~~~~-~~~ 172 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF----------G-------------LR-AVPLEKA-REA 172 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH----------T-------------CE-ECCGGGG-GGC
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------c-------------cc-hhhHhhc-cCC
Confidence 799999999999999999999999999999998766543211 1 01 1233 44 889
Q ss_pred CEEEEeccCC
Q 004891 389 DMVIEAVIES 398 (725)
Q Consensus 389 DlVIeavpe~ 398 (725)
|+||.|+|..
T Consensus 173 Divi~~tp~~ 182 (263)
T 2d5c_A 173 RLLVNATRVG 182 (263)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEccCCC
Confidence 9999999855
No 278
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.51 E-value=0.00031 Score=73.51 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=65.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCC--CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc---ccCc
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDY 382 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~~ 382 (725)
+||+|||+ |.+|.+++..|+..| .+|+++|+++ . +..... +..... ...+.. ++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~-~~~a~d--------L~~~~~--------~~~l~~~~~t~d~ 62 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-T-PGVAAD--------LSHIET--------RATVKGYLGPEQL 62 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-H-HHHHHH--------HTTSSS--------SCEEEEEESGGGH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-c-HHHHHH--------HhccCc--------CceEEEecCCCCH
Confidence 38999998 999999999999988 6999999997 1 111100 111110 012443 3566
Q ss_pred c-cccCCCEEEEecc--CCh------------HHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 383 S-EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 383 ~-~l~~aDlVIeavp--e~~------------~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
+ ++++||+||.++. ... .+.+++.+.+.+++ |+++++.. +.|+..
T Consensus 63 ~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--sNPv~~ 122 (314)
T 1mld_A 63 PDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICII--SNPVNS 122 (314)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC--SSCHHH
T ss_pred HHHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEE--CCCcch
Confidence 4 6999999999973 111 56677777888887 55544432 344443
No 279
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.46 E-value=0.00023 Score=74.88 Aligned_cols=102 Identities=18% Similarity=0.250 Sum_probs=65.8
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCC--CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc---ccC
Q 004891 308 VRKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (725)
Q Consensus 308 ~~kIaVIG-~G~mG~~iA~~l~~~G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (725)
.+||+|+| +|.+|.+++..|+..| .+|+++|++++. ..+.+ + ..... ...+.. +++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~d-----L----~~~~~--------~~~v~~~~~t~d 69 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTAD-----I----SHMDT--------GAVVRGFLGQQQ 69 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHHH-----H----HTSCS--------SCEEEEEESHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHHH-----h----hcccc--------cceEEEEeCCCC
Confidence 36899999 7999999999999999 799999998761 11110 1 11100 012222 345
Q ss_pred c-ccccCCCEEEEeccC--C------------hHHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 382 Y-SEFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 382 ~-~~l~~aDlVIeavpe--~------------~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
+ +++++||+||.+++- . ..+.+.+.+.+.+.. ++.+|+. +|.|+..
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv--~SNPv~~ 130 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNL--ISNPVNS 130 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEE--CCSSHHH
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEE--ECCchHH
Confidence 5 668999999999841 1 145666777777776 5555543 2455554
No 280
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.39 E-value=0.0026 Score=64.99 Aligned_cols=150 Identities=13% Similarity=0.081 Sum_probs=95.0
Q ss_pred eCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhC
Q 004891 20 LINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDC 97 (725)
Q Consensus 20 l~~p~--~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (725)
-+++. .-+++....+.+.++++.+.+. .+-+|.|.-.|+ +-.++-. . . ...+. .....+ .++...
T Consensus 127 a~d~~~~gGs~g~~~~~K~~r~ie~A~~~-~lPlI~l~dsgG-----ar~qEGi---~-s-l~q~a-ki~~~l-~~~s~~ 193 (285)
T 2f9i_B 127 VMDSRFRMGSMGSVIGEKICRIIDYCTEN-RLPFILFSASGG-----ARMQEGI---I-S-LMQMG-KTSVSL-KRHSDA 193 (285)
T ss_dssp EECTTTGGGCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEECS-----CCGGGHH---H-H-HHHHH-HHHHHH-HHHHHT
T ss_pred EEccccccCcCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCC-----cchhhhh---h-h-HhHHH-HHHHHH-HHHHcC
Confidence 34443 3789999999999999988865 566777764333 2222200 0 0 00111 112233 446678
Q ss_pred CCcEEEEEcccccchhhHH-hhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHHHH
Q 004891 98 KKPIVAAVEGLALGGGLEL-AMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWK 176 (725)
Q Consensus 98 ~kp~Iaav~G~a~GgG~~l-alacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA~~ 176 (725)
..|.|+++.|.|.||+... ++.+|+++|.++|.+++-... .....+-+-+ .-.--+|+.+.+
T Consensus 194 ~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~-------vi~~~~~~~~----------~e~~~~Ae~~~~ 256 (285)
T 2f9i_B 194 GLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRR-------VIEQTINEKL----------PDDFQTAEFLLE 256 (285)
T ss_dssp TCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHH-------HHHHHHTSCC----------CTTTTBHHHHHH
T ss_pred CCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHH-------HHHHHhcccc----------hHhHhhHHHHHh
Confidence 9999999999999998654 789999999999888763211 1111111111 111125777889
Q ss_pred cCCcceecCcchHHHHHHHHHHH
Q 004891 177 LGLIDAVVTSEELLKVSRLWALD 199 (725)
Q Consensus 177 ~Glv~~vv~~~~l~~~a~~~a~~ 199 (725)
.|+||.|++++++.+...++...
T Consensus 257 ~G~iD~Iv~~~e~r~~l~~~L~~ 279 (285)
T 2f9i_B 257 HGQLDKVVHRNDMRQTLSEILKI 279 (285)
T ss_dssp TTCCSEECCGGGHHHHHHHHHHH
T ss_pred cCCccEEeChHHHHHHHHHHHHH
Confidence 99999999988877766665543
No 281
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.38 E-value=8.9e-05 Score=81.68 Aligned_cols=88 Identities=17% Similarity=0.152 Sum_probs=62.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||.|.||.++|+.+...|.+|++||+++.....+. ..| ... .++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G-------------~~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEG-------------YRV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcC-------------CEe-CCHHHHHhc
Confidence 6899999999999999999999999999999987632221 111 111 233 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (725)
||+|+.++...--+. .+..+.++++++|+..+++
T Consensus 333 aDiVi~~~~t~~lI~----~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATGNYHVIN----HDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCCcccccC----HHHHhhCCCCcEEEEcCCC
Confidence 999999983221122 3445668999998754443
No 282
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.37 E-value=7.8e-05 Score=81.81 Aligned_cols=88 Identities=15% Similarity=0.149 Sum_probs=62.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||.|.||.++|+.+...|.+|++||+++.....+. ..| ... .++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g-------------~~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEG-------------FNV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcC-------------CEe-cCHHHHHhc
Confidence 6899999999999999999999999999999987643321 111 111 233 56889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (725)
||+||.+....--+. .+..+.++++++|+..+++
T Consensus 313 aDiVi~~~~t~~lI~----~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 313 GDFFITCTGNVDVIK----LEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSEEEECCSSSSSBC----HHHHTTCCTTCEEEECSST
T ss_pred CCEEEECCChhhhcC----HHHHhhcCCCcEEEEeCCC
Confidence 999999963211121 2444568999998754443
No 283
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.36 E-value=0.00052 Score=74.47 Aligned_cols=73 Identities=16% Similarity=0.140 Sum_probs=47.7
Q ss_pred cceEEEEcCCCC-cHHHHHHHHH--C---CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 308 VRKVAVIGGGLM-GSGIATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 308 ~~kIaVIG~G~m-G~~iA~~l~~--~---G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
.+||+|||+|.. +.++...|+. . +.+|+++|+++++++.+.+ +...+ .... .+++.++|
T Consensus 2 ~~KI~IIGaG~v~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~~-~~~~~---~~~~-----------~~v~~t~d 66 (417)
T 1up7_A 2 HMRIAVIGGGSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVD-FVKRL---VKDR-----------FKVLISDT 66 (417)
T ss_dssp CCEEEEETTTCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHH-HHHHH---HTTS-----------SEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHHH-HHHHH---hhCC-----------eEEEEeCC
Confidence 369999999985 1122234455 3 5589999999998775332 22111 1110 24666678
Q ss_pred c-ccccCCCEEEEec
Q 004891 382 Y-SEFKDVDMVIEAV 395 (725)
Q Consensus 382 ~-~~l~~aDlVIeav 395 (725)
+ +++++||+||+++
T Consensus 67 ~~~al~~AD~Viita 81 (417)
T 1up7_A 67 FEGAVVDAKYVIFQF 81 (417)
T ss_dssp HHHHHTTCSEEEECC
T ss_pred HHHHhCCCCEEEEcC
Confidence 6 8899999999998
No 284
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.34 E-value=0.00087 Score=66.09 Aligned_cols=95 Identities=16% Similarity=0.159 Sum_probs=59.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCC-HHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+||.|+|+|.+|..+|..|.+.|++|+++|++++.++...+. .....-.|..+ .+... ...+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~~~~~i~gd~~~~~~l~-----------~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----LKATIIHGDGSHKEILR-----------DAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----SSSEEEESCTTSHHHHH-----------HHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----cCCeEEEcCCCCHHHHH-----------hcCccc
Confidence 379999999999999999999999999999999987654221 00000011111 10000 023688
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHh-CCCCeEEE
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKA-CPPHCILA 420 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~-~~~~~ii~ 420 (725)
||+||.+++++.. ..+...+.+. .+...+++
T Consensus 66 ad~vi~~~~~d~~--n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 66 NDVVVILTPRDEV--NLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp TCEEEECCSCHHH--HHHHHHHHHHTSCCCEEEE
T ss_pred CCEEEEecCCcHH--HHHHHHHHHHHcCCCeEEE
Confidence 9999999985543 2334444443 44455554
No 285
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.31 E-value=0.0035 Score=69.39 Aligned_cols=137 Identities=12% Similarity=0.107 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHH-HHhhCCCcEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN-LIEDCKKPIVA 103 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~kp~Ia 103 (725)
--++.....+.+.++++.+.+. .+-+|.|.-. .|+.+.+-.. .+.... +.+.+ ....-..|+|+
T Consensus 118 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~~--------sl~~~~-~i~~~~~~~s~~iP~Is 182 (531)
T 3n6r_B 118 GGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGVD--------SLAGYG-EVFQRNIMASGVVPQIS 182 (531)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTHH--------HHHHHH-HHHHHHHHTTTTSCEEE
T ss_pred cccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCcccc--------hhhhHH-HHHHHHHHHhCCCCEEE
Confidence 4789999999999999988765 4567777653 4455543110 000111 12211 11224589999
Q ss_pred EEcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHH-------H
Q 004891 104 AVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------W 175 (725)
Q Consensus 104 av~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA-------~ 175 (725)
+|.|+|.|||......||++|+.++ +.+++. |+.... ..+|+.+++++. .
T Consensus 183 vv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~a--------------------GP~vI~--~~~ge~v~~E~LGGa~~h~~ 240 (531)
T 3n6r_B 183 MIMGPCAGGAVYSPAMTDFIFMVKDSSYMFVT--------------------GPDVVK--TVTNEQVSAEELGGATTHTR 240 (531)
T ss_dssp EECSCCBGGGGHHHHHSSEEEEETTTCBCBSS--------------------CHHHHH--HHHCCCCCHHHHHBHHHHHH
T ss_pred EEeCCcchHHHHHhhhCCEEEEecCCceEeec--------------------CHHHHH--HHhCCccChhhcchHHHHhh
Confidence 9999999999988888999999985 666642 322222 257899999999 8
Q ss_pred HcCCcceecCcchHHHHHHHHHHHHH
Q 004891 176 KLGLIDAVVTSEELLKVSRLWALDIA 201 (725)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~la 201 (725)
+.|++|.+++.++ .+.+.++++.
T Consensus 241 ~sG~~d~v~~~e~---~a~~~~r~ll 263 (531)
T 3n6r_B 241 KSSVADAAFENDV---EALAEVRRLV 263 (531)
T ss_dssp TTSCCSEEESSHH---HHHHHHHHHH
T ss_pred ccCcceEEeCCHH---HHHHHHHHHH
Confidence 9999999997753 3444444443
No 286
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.31 E-value=0.00027 Score=78.09 Aligned_cols=86 Identities=26% Similarity=0.260 Sum_probs=62.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+ .|. .. .++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~Ga-------------~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EGF-------------DV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCC-------------EE-ecHHHHHhC
Confidence 68999999999999999999999999999999988665431 121 11 122 44678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
+|+||+|++...-+. .+..+.++++++|+...
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeC
Confidence 999999987544332 23445578888886443
No 287
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.30 E-value=0.00096 Score=71.05 Aligned_cols=98 Identities=12% Similarity=0.130 Sum_probs=63.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
+++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .+ +...+++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~----------------------~~-~~~~~~~ 67 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER----------------------TG-ARGHASL 67 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------------------HC-CEEESCH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH----------------------cC-CceeCCH
Confidence 3457899999999999999999987 77765 899999987665321 11 2445566
Q ss_pred -cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 383 -SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 383 -~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
+.++ ++|+|++|+|..... ++.....+. ...+++-..-+....+
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~a~~~~~ 114 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGLHP--TQSIECSEA--GFHVMTEKPMATRWED 114 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGGHH--HHHHHHHHT--TCEEEECSSSCSSHHH
T ss_pred HHHhcCCCCCEEEECCCcHHHH--HHHHHHHHC--CCCEEEeCCCcCCHHH
Confidence 3443 799999999965543 333333221 2234444443444443
No 288
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.30 E-value=0.00027 Score=74.58 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=65.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCC-------cEEEEeCC----hHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcC
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~----~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~ 375 (725)
.+||+|+|+ |.+|.+++..|+..|+ +|+++|++ +++++.....+ ...... ....
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl--------~~~~~~------~~~~ 70 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEI--------DDCAFP------LLAG 70 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHH--------HTTTCT------TEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHH--------hhhccc------ccCc
Confidence 368999998 9999999999999886 89999999 55443211111 111000 1124
Q ss_pred cccccCc-ccccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004891 376 LKGVLDY-SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (725)
Q Consensus 376 i~~~~~~-~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (725)
+..+++. +++++||+||.+..- +..+.+++.+.+.+++.++++++.
T Consensus 71 i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~ 131 (329)
T 1b8p_A 71 MTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLV 131 (329)
T ss_dssp EEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 4545564 779999999988631 223456677778888756665543
No 289
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.28 E-value=0.004 Score=68.98 Aligned_cols=138 Identities=12% Similarity=0.082 Sum_probs=93.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHH--HHhhCCCcEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN--LIEDCKKPIV 102 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~kp~I 102 (725)
.-++.....+.+..+++.+.+. .+-+|.|.-. .|+.+.+-. ..+.. +-+.+.+ .+.. ..|+|
T Consensus 110 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dS-----gGaRmqEg~--------~~l~~-~~~i~~~~~~~s~-~iP~I 173 (530)
T 3iav_A 110 GGALGEVYGQKIVKVMDFALKT-GCPVVGINDS-----GGARIQEGV--------ASLGA-YGEIFRRNTHASG-VIPQI 173 (530)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CSBCGGGTH--------HHHHH-HHHHHHHHHHTTT-TSCEE
T ss_pred eEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcC-----CCcchhhhh--------hhHHH-HHHHHHHHHHHcC-CCCEE
Confidence 4789999999999999988865 5667777653 344443211 00111 1122211 1222 49999
Q ss_pred EEEcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHH-------
Q 004891 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG------- 174 (725)
Q Consensus 103 aav~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA------- 174 (725)
++|.|+|.|||......||++|++++ +.+++. |+...+ ..+|+.+++++.
T Consensus 174 svv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~--~~~ge~v~~e~LGGa~~h~ 231 (530)
T 3iav_A 174 SLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK--TVTGEDVGFEELGGARTHN 231 (530)
T ss_dssp EEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH--HHHCCCCCHHHHHBHHHHH
T ss_pred EEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHH--HHhCCcCChhhcchHHHHH
Confidence 99999999999998889999999975 888763 333222 257899999876
Q ss_pred HHcCCcceecCcc-hHHHHHHHHHHHH
Q 004891 175 WKLGLIDAVVTSE-ELLKVSRLWALDI 200 (725)
Q Consensus 175 ~~~Glv~~vv~~~-~l~~~a~~~a~~l 200 (725)
...|++|.+++.+ +..+.+.++...+
T Consensus 232 ~~sGv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 232 STSGVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp HTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred hccCceeEEecChHHHHHHHHHHHHhc
Confidence 6899999999765 3555555555443
No 290
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.27 E-value=0.00041 Score=76.65 Aligned_cols=75 Identities=13% Similarity=0.188 Sum_probs=49.1
Q ss_pred ceEEEEcCCCCcHH--HHHHHHH----C--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 309 RKVAVIGGGLMGSG--IATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 309 ~kIaVIG~G~mG~~--iA~~l~~----~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
.||+|||+|..|.. +...++. . +.+|+++|+++++++.....+++..+.. +. --.+..++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~---~~---------~~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEEL---NS---------PVKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHH---TC---------CCEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHc---CC---------CeEEEEeC
Confidence 48999999997744 2223332 2 3479999999998776543333322211 10 12466778
Q ss_pred Cc-ccccCCCEEEEec
Q 004891 381 DY-SEFKDVDMVIEAV 395 (725)
Q Consensus 381 ~~-~~l~~aDlVIeav 395 (725)
|. +++++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 87 7799999999986
No 291
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.27 E-value=0.0004 Score=73.69 Aligned_cols=95 Identities=19% Similarity=0.175 Sum_probs=61.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~--~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
++|+|||+|.||..++..+.. ...+|++||++++++++..+.+.. ..|. .+...++. +.+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~------~~g~-----------~~~~~~~~~eav 192 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE------YSGL-----------TIRRASSVAEAV 192 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT------CTTC-----------EEEECSSHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh------ccCc-----------eEEEeCCHHHHH
Confidence 579999999999999988764 346899999999988775432210 0010 12233444 567
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
++||+||.|+|.... ..++. .+.+++++.|...+|
T Consensus 193 ~~aDiVi~aTps~~~--~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 193 KGVDIITTVTADKAY--ATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp TTCSEEEECCCCSSE--EEEEC--GGGCCTTCEEEECSC
T ss_pred hcCCEEEEeccCCCC--Cceec--HHHcCCCCEEEECCC
Confidence 899999999985410 01111 145677777655433
No 292
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.27 E-value=0.00071 Score=71.35 Aligned_cols=100 Identities=10% Similarity=-0.004 Sum_probs=63.9
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
+++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .+.....+++
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~ 60 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKE----------------------LAIPVAYGSYE 60 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHH----------------------TTCCCCBSSHH
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHH----------------------cCCCceeCCHH
Confidence 3456899999999999999999984 67776 789999886654321 1111234555
Q ss_pred cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 383 ~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+.+. ++|+|++|+|..... ++.....+. ...+++....+....+.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~e~ 107 (330)
T 3e9m_A 61 ELCKDETIDIIYIPTYNQGHY--SAAKLALSQ--GKPVLLEKPFTLNAAEA 107 (330)
T ss_dssp HHHHCTTCSEEEECCCGGGHH--HHHHHHHHT--TCCEEECSSCCSSHHHH
T ss_pred HHhcCCCCCEEEEcCCCHHHH--HHHHHHHHC--CCeEEEeCCCCCCHHHH
Confidence 3344 799999999966543 333333221 12355555445555543
No 293
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.25 E-value=0.00022 Score=75.24 Aligned_cols=100 Identities=21% Similarity=0.177 Sum_probs=69.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|||||.|.+|..+|..+..-|.+|+.||+....... +.+ .. ..++ +.+++
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~~~-------------~~-~~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CV-YTSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CE-ECCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------hcC-------------ce-ecCHHHHHhh
Confidence 68999999999999999999999999999987543111 111 11 2233 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC---CChHHHhcccC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGEKTS 436 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~---~~~~~l~~~~~ 436 (725)
||+|+.++|-..+.+.-+=++..+.++++++++ |++- +.-..+.+.+.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lI-N~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLI-NTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEE-ecCccccccHHHHHHHHH
Confidence 999999999666543333345666789999886 5652 33345555554
No 294
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.20 E-value=0.00074 Score=70.44 Aligned_cols=98 Identities=12% Similarity=-0.034 Sum_probs=62.9
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHH-CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 307 GVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
++.||+|||+|.||.. ++..+.+ .+++++ ++|+++++++...+.. | +...+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------~-------------~~~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY----------R-------------IMPFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH----------T-------------CCBCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCCcCCHH
Confidence 4568999999999997 8888876 477877 8999999877653211 1 1124454
Q ss_pred ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 383 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+.++++|+|++|+|..... ++.....+. ...+++....+....+.
T Consensus 62 ~ll~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~~~ 106 (308)
T 3uuw_A 62 SLAKKCDCIFLHSSTETHY--EIIKILLNL--GVHVYVDKPLASTVSQG 106 (308)
T ss_dssp HHHTTCSEEEECCCGGGHH--HHHHHHHHT--TCEEEECSSSSSSHHHH
T ss_pred HHHhcCCEEEEeCCcHhHH--HHHHHHHHC--CCcEEEcCCCCCCHHHH
Confidence 4456899999999965543 444433322 12255544455555443
No 295
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.20 E-value=0.0002 Score=77.22 Aligned_cols=86 Identities=21% Similarity=0.189 Sum_probs=60.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||.|.||.++|..+...|.+|+++|+++.....+. ..| .. ..++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G-------------~~-~~sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEG-------------YQ-VLLVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhC-------------Ce-ecCHHHHHhh
Confidence 6899999999999999999999999999999987654332 111 11 1233 67889
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
||+||.+....--+. .+..+.++++++|+..+
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVINvg 298 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVCNIG 298 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEEECS
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEEEeC
Confidence 999998654222221 23445678999886433
No 296
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.17 E-value=0.00031 Score=70.31 Aligned_cols=77 Identities=21% Similarity=0.175 Sum_probs=52.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc-c
Q 004891 310 KVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-K 386 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l-~ 386 (725)
||+|||+|.||..++..+.+.|++| .+||+++. .+. ..+++ +.+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~-------------------------------~~~~~~~l~~~ 49 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK-------------------------------MVRGIDEFLQR 49 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT-------------------------------EESSHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh-------------------------------hcCCHHHHhcC
Confidence 7999999999999999999999997 69999852 100 13344 334 6
Q ss_pred CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 387 ~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
++|+||+|+|.+ .-.++.. ..+..+..+++.+
T Consensus 50 ~~DvVv~~~~~~--~~~~~~~---~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 50 EMDVAVEAASQQ--AVKDYAE---KILKAGIDLIVLS 81 (236)
T ss_dssp CCSEEEECSCHH--HHHHHHH---HHHHTTCEEEESC
T ss_pred CCCEEEECCCHH--HHHHHHH---HHHHCCCcEEEEC
Confidence 899999999943 2223332 2334566555443
No 297
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.12 E-value=0.00083 Score=67.26 Aligned_cols=86 Identities=20% Similarity=0.141 Sum_probs=54.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
.|.||+|+|+|.||..++..+.+.+.+++ ++|++++. . ..+..+++++.+
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~-------------~gv~v~~dl~~l 52 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T-------------TPYQQYQHIADV 52 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------------------------------CCSCBCSCTTTC
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c-------------CCCceeCCHHHH
Confidence 36799999999999999999998877765 47887652 0 123445666443
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (725)
.++|+||++.. ++..... +. +..+.-+++.|+++..
T Consensus 53 ~~~DVvIDft~--p~a~~~~---~~--l~~g~~vVigTTG~s~ 88 (243)
T 3qy9_A 53 KGADVAIDFSN--PNLLFPL---LD--EDFHLPLVVATTGEKE 88 (243)
T ss_dssp TTCSEEEECSC--HHHHHHH---HT--SCCCCCEEECCCSSHH
T ss_pred hCCCEEEEeCC--hHHHHHH---HH--HhcCCceEeCCCCCCH
Confidence 39999997764 3322222 22 4455444445555543
No 298
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.11 E-value=0.00071 Score=72.12 Aligned_cols=151 Identities=12% Similarity=0.068 Sum_probs=92.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
+||+|||.|..|.+-|.+|..+|.+|++--|.....+.. ..+++..+.| ..+.+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~~-----~S~~~A~~~G-------------f~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEKR-----ASWRKATENG-------------FKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTTC-----HHHHHHHHTT-------------CEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCccccc-----chHHHHHHCC-------------CEecCHHHHHHhC
Confidence 799999999999999999999999998876633211100 0011112222 3333334788999
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCC--cEEEEecCCCC----------CCCCee
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD--RIIGAHFFSPA----------HVMPLL 456 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~--r~ig~h~~~p~----------~~~~lv 456 (725)
|+|+.-+|+.. -..++++|.++++++..+.- +.++.+.. ..+..|. .++-+-|-.|- ...|-+
T Consensus 100 DvV~~L~PD~~--q~~vy~~I~p~lk~G~~L~f-aHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPDKQ--HSDVVRTVQPLMKDGAALGY-SHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCGGG--HHHHHHHHGGGSCTTCEEEE-SSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCChhh--HHHHHHHHHhhCCCCCEEEe-cCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 99999999654 44778999999999998763 34554432 2222222 23333332221 122322
Q ss_pred eEe-cCCCCCHHHHHHHHHHHHHcCCe
Q 004891 457 EIV-RTERTSAQVILDLMTVGKIIKKV 482 (725)
Q Consensus 457 eii-~~~~t~~e~~~~~~~l~~~lGk~ 482 (725)
-.| +-...+..+.+.+..+...+|..
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~ 201 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGH 201 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGG
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCC
Confidence 233 12233556778888899999864
No 299
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.10 E-value=0.0014 Score=69.45 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=63.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+ ..+ ....+++ +.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~----------------------~~g-~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAE----------------------ANG-AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHH----------------------TTT-CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHH----------------------HcC-CceeCCHHHH
Confidence 46899999999999999999886 77776 89999988665422 111 3345555 44
Q ss_pred cc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 385 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
++ ++|+|++|+|..... ++.....+. ...+++....+....+
T Consensus 61 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~ 104 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTHV--DLITRAVER--GIPALCEKPIDLDIEM 104 (344)
T ss_dssp TTCSCCCEEEECSCGGGHH--HHHHHHHHT--TCCEEECSCSCSCHHH
T ss_pred hcCCCCCEEEEeCCchhhH--HHHHHHHHc--CCcEEEECCCCCCHHH
Confidence 55 799999999965553 333333322 1235555444555544
No 300
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.10 E-value=0.00029 Score=74.94 Aligned_cols=104 Identities=12% Similarity=0.098 Sum_probs=63.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHH--------cCC---CCHHHHHHhhcCcc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT--------RGK---LTQDKANNALKMLK 377 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~--------~g~---~~~~~~~~~~~~i~ 377 (725)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+.+ +. .+.+. .+. ++.+....
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~-lG---a~~~~l~~~~~~~~gya~~~~~~~~~~------ 254 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS-VG---AQWLDLGIDAAGEGGYARELSEAERAQ------ 254 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH-TT---CEECCCC-------------CHHHHHH------
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CeEEeccccccccccchhhhhHHHHhh------
Confidence 68999999999999999999999999999999988776532 00 00000 000 01110000
Q ss_pred cccCc-ccccCCCEEEEec--cCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 378 GVLDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 378 ~~~~~-~~l~~aDlVIeav--pe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
...++ +.++++|+||.++ |....- .-+-++..+.++++.+|+..+
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~ap-~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPAP-RLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCCC-CCBCHHHHHTSCTTCEEEETT
T ss_pred hHHHHHHHHhcCCEEEECCCCCCcccc-eeecHHHHhcCCCCcEEEEEe
Confidence 01122 5679999999986 421110 001244556678999887643
No 301
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.09 E-value=0.00075 Score=70.87 Aligned_cols=70 Identities=17% Similarity=0.045 Sum_probs=51.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~--~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
++|+|||+|.||..++..++. ...+|.+|||+++++++..+.+.. .+ + .+. .+++ +.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHHh
Confidence 589999999999999999987 346899999999998776543211 11 0 122 3444 567
Q ss_pred cCCCEEEEeccCC
Q 004891 386 KDVDMVIEAVIES 398 (725)
Q Consensus 386 ~~aDlVIeavpe~ 398 (725)
++|+||.|+|..
T Consensus 187 -~aDvVi~aTp~~ 198 (322)
T 1omo_A 187 -RCDVLVTTTPSR 198 (322)
T ss_dssp -SSSEEEECCCCS
T ss_pred -CCCEEEEeeCCC
Confidence 899999999843
No 302
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=97.07 E-value=0.0015 Score=70.27 Aligned_cols=85 Identities=21% Similarity=0.327 Sum_probs=59.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|+|+|.+|..+|..+...|.+|+++|+++.....+. ..| .. ..++ +.+++
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G-------------~~-v~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDG-------------FR-LVKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcC-------------CE-eccHHHHHhc
Confidence 6899999999999999999999999999999987644321 111 11 1223 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+|+||.| +....+.. .+..+.++++++|+..
T Consensus 276 ADIVi~a-tgt~~lI~---~e~l~~MK~gailINv 306 (435)
T 3gvp_A 276 VDIVITC-TGNKNVVT---REHLDRMKNSCIVCNM 306 (435)
T ss_dssp CSEEEEC-SSCSCSBC---HHHHHHSCTTEEEEEC
T ss_pred CCEEEEC-CCCcccCC---HHHHHhcCCCcEEEEe
Confidence 9999997 43222211 2344557899988643
No 303
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.07 E-value=0.00015 Score=73.42 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=34.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHH
Q 004891 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~ 346 (725)
+|.|||+|.||.+++..|++.|. +|+++||++++++.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 79999999999999999999999 99999999987554
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.07 E-value=0.0019 Score=59.69 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=33.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCC-hHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLK 346 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~-~e~~~~ 346 (725)
++|.|+|+|.+|..++..|.+.|++|+++|++ ++..+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 57999999999999999999999999999998 455443
No 305
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=97.06 E-value=0.00022 Score=76.48 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=36.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 6899999999999999999999999999999998876653
No 306
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.06 E-value=0.0004 Score=72.56 Aligned_cols=91 Identities=14% Similarity=0.164 Sum_probs=59.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
++|+|||+|.||..++..|... ..+|++||++ +.++..+++.+.+ |. .+... +. +.+
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~------g~-----------~~~~~-~~~eav 181 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC------GV-----------PARMA-APADIA 181 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH------TS-----------CEEEC-CHHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc------CC-----------eEEEe-CHHHHH
Confidence 5799999999999999999863 4589999999 4333332221110 10 12223 44 567
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (725)
++||+||.|+|.... ++. .+.++++++|....|.
T Consensus 182 ~~aDIVi~aT~s~~p----vl~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 182 AQADIVVTATRSTTP----LFA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHCSEEEECCCCSSC----SSC--GGGCCTTCEEEECCCS
T ss_pred hhCCEEEEccCCCCc----ccC--HHHcCCCcEEEECCCC
Confidence 899999999985422 222 2457788877655443
No 307
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=97.06 E-value=0.0097 Score=66.03 Aligned_cols=139 Identities=15% Similarity=0.102 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.-++.....+.+..+++.+.++ .+-+|.|+. |.|+.+.+-... ...+...+.... + + .-..|.|++
T Consensus 108 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~~s-----l~~~~~i~~~~~-~-~-s~~iP~Isv 173 (523)
T 1on3_A 108 GGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGIDS-----LSGYGKMFFANV-K-L-SGVVPQIAI 173 (523)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH-----HHHHHHHHHHHH-H-H-TTTSCEEEE
T ss_pred CCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHHHH-----HHHHHHHHHHHH-H-h-cCCCCEEEE
Confidence 4789999999999999988865 566777765 556666542210 001111111111 1 2 345999999
Q ss_pred EcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHH-----HHH--Hc
Q 004891 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--KL 177 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~-----eA~--~~ 177 (725)
+.|+|.||+......||++||.+++.+++. |++.... .+|+.++.+ +.+ +.
T Consensus 174 v~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lggae~h~~~~ 231 (523)
T 1on3_A 174 IAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELGGAEAHMAIS 231 (523)
T ss_dssp EEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHSHHHHHHTT
T ss_pred EcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhcccHHHHhhcc
Confidence 999999999999999999999998888765 3222221 467788764 223 69
Q ss_pred CCcceecCcc-hHHHHHHHHHHH
Q 004891 178 GLIDAVVTSE-ELLKVSRLWALD 199 (725)
Q Consensus 178 Glv~~vv~~~-~l~~~a~~~a~~ 199 (725)
|++|.+++.+ ++.+.+.++...
T Consensus 232 G~vd~vv~d~~~~~~~~r~lL~~ 254 (523)
T 1on3_A 232 GNIHFVAEDDDAAELIAKKLLSF 254 (523)
T ss_dssp CCCSEEESSHHHHHHHHHHHHHT
T ss_pred CceEEEeCCHHHHHHHHHHHHHh
Confidence 9999999754 455555555443
No 308
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.03 E-value=0.0015 Score=68.35 Aligned_cols=97 Identities=10% Similarity=0.012 Sum_probs=59.9
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHH-CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~-iA~~l~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
|+..||+|||+|.||.. ++..+.+ .|++|+ ++|+++++++...+.. | +...+++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~ 59 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----------R-------------IPYADSL 59 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----------T-------------CCBCSSH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCccCcH
Confidence 34468999999999997 8888876 477876 9999998766543210 1 1123444
Q ss_pred ccc-cCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 383 SEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 383 ~~l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
+.+ .++|+|++|+|..... ++..... ..+. +++....+....+
T Consensus 60 ~~l~~~~D~V~i~tp~~~h~--~~~~~al---~~G~~v~~eKP~~~~~~~ 104 (319)
T 1tlt_A 60 SSLAASCDAVFVHSSTASHF--DVVSTLL---NAGVHVCVDKPLAENLRD 104 (319)
T ss_dssp HHHHTTCSEEEECSCTTHHH--HHHHHHH---HTTCEEEEESSSCSSHHH
T ss_pred HHhhcCCCEEEEeCCchhHH--HHHHHHH---HcCCeEEEeCCCCCCHHH
Confidence 433 6799999999965543 3333322 2343 5554444455443
No 309
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.01 E-value=0.0016 Score=67.97 Aligned_cols=99 Identities=18% Similarity=0.132 Sum_probs=62.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC--cEEEEeC--ChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC--
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD-- 381 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~--~V~~~d~--~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~-- 381 (725)
+||+|+|+ |.+|.+++..|+..|+ ++.++|+ ++++++.....+.+.. . ..+. .-.+..+++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~--~~~~---------~~~i~~~~d~l 68 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-A--GTRS---------DANIYVESDEN 68 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-T--TSCC---------CCEEEEEETTC
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-H--hcCC---------CeEEEeCCcch
Confidence 38999999 9999999999998886 6999999 7765443222222110 0 0000 002332333
Q ss_pred cccccCCCEEEEecc--C------------ChHHHHHHHHHHHHhCCCCeEEEe
Q 004891 382 YSEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILAT 421 (725)
Q Consensus 382 ~~~l~~aDlVIeavp--e------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (725)
.+++++||+||.+.- . +..+.+.+.+.+.++. +++++.
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv 120 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV 120 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE
Confidence 578999999998872 1 2335556667777777 555543
No 310
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.01 E-value=0.00035 Score=71.74 Aligned_cols=71 Identities=13% Similarity=0.203 Sum_probs=51.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc-cc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-FK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-l~ 386 (725)
++|.|+|+|.||.+++..|++.|. +|++++|++++++...+.+. ..+ .+... +++. ..
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~-------~~~------------~~~~~-~~~~l~~ 186 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA-------AYG------------EVKAQ-AFEQLKQ 186 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG-------GGS------------CEEEE-EGGGCCS
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh-------ccC------------CeeEe-eHHHhcC
Confidence 689999999999999999999997 99999999988766543221 001 11111 2222 27
Q ss_pred CCCEEEEeccCCh
Q 004891 387 DVDMVIEAVIESV 399 (725)
Q Consensus 387 ~aDlVIeavpe~~ 399 (725)
++|+||.|+|-.+
T Consensus 187 ~aDiIInaTp~gm 199 (281)
T 3o8q_A 187 SYDVIINSTSASL 199 (281)
T ss_dssp CEEEEEECSCCCC
T ss_pred CCCEEEEcCcCCC
Confidence 8999999998544
No 311
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=97.01 E-value=0.00089 Score=72.08 Aligned_cols=88 Identities=18% Similarity=0.238 Sum_probs=61.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||.|.+|..+|+.+...|.+|+++|+++.....+. ..| ... .++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~v-v~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEV-VTLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------cee-ccHHHHHhh
Confidence 6899999999999999999999999999999987543321 111 111 123 56789
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (725)
||+|+.+....--+. .+....++++++|+ |++..
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILI-NvGRg 336 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVG-NIGHF 336 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEE-ECSSS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEE-EcCCC
Confidence 999999864322222 33445678999886 55543
No 312
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.00 E-value=0.00033 Score=75.29 Aligned_cols=97 Identities=20% Similarity=0.167 Sum_probs=61.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|||+|.||..+|+.+...|.+|+++|+++++++.+.+.+ |.-. .-......++ +.+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----------g~~~-------~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----------CGRI-------HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSS-------EEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----------CCee-------EeccCCHHHHHHHHcC
Confidence 6899999999999999999999999999999998876643210 1000 0000000111 34568
Q ss_pred CCEEEEeccCChH-HHHHHHHHHHHhCCCCeEEEec
Q 004891 388 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 388 aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+|+||+|++-+.. ...-+.++..+.++++.+|+..
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 9999998853221 1111123445567888877644
No 313
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.00 E-value=0.0011 Score=69.17 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=61.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHC-C--CcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc---ccC
Q 004891 309 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (725)
Q Consensus 309 ~kIaVIG-~G~mG~~iA~~l~~~-G--~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (725)
+||+||| +|.+|.++|..|+.. + .+++++|+++ .++...-.+ ..... .-.+.. +++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl--------~~~~~--------~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDL--------SHIPT--------AVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHH--------HTSCS--------SEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHh--------hCCCC--------CceEEEecCCCc
Confidence 4899999 899999999999875 5 4899999987 322111011 11100 012222 245
Q ss_pred cccccCCCEEEEeccC--------------ChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 382 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 382 ~~~l~~aDlVIeavpe--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
++++++||+||.+..- +..+.+++.+.+.+++ |+++++..
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~-p~a~vlvv 117 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGII 117 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEe
Confidence 6889999999998731 2344555566778876 45555443
No 314
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=97.00 E-value=0.014 Score=65.06 Aligned_cols=135 Identities=15% Similarity=0.061 Sum_probs=90.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHh--hCCCcEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE--DCKKPIV 102 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~kp~I 102 (725)
--++.....+.+..+++.+.++ .+-+|.|.- |.|+.+.+-... +. .+.+.+ ..+. .-..|.|
T Consensus 121 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~~s--------l~-~~~~i~-~~~~~~s~~iP~I 184 (548)
T 2bzr_A 121 GGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVVS--------LG-LYSRIF-RNNILASGVIPQI 184 (548)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTTHH--------HH-HHHHHH-HHHHHTTTTSCEE
T ss_pred cCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHHHH--------HH-HHHHHH-HHHHHhcCCCcEE
Confidence 4789999999999999988865 566788875 456666432110 01 111222 1122 3349999
Q ss_pred EEEcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHH-----HH--
Q 004891 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EG-- 174 (725)
Q Consensus 103 aav~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~-----eA-- 174 (725)
+++.|+|.||+......||++||.++ +.+++. |+..... .+|+.++.+ +.
T Consensus 185 svv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~e~lggae~h~ 242 (548)
T 2bzr_A 185 SLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELGGAHTHM 242 (548)
T ss_dssp EEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHH
T ss_pred EEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCChHhcccHHHHh
Confidence 99999999999988889999999987 877754 3332222 467888865 22
Q ss_pred HHcCCcceecCcc-hHHHHHHHHH
Q 004891 175 WKLGLIDAVVTSE-ELLKVSRLWA 197 (725)
Q Consensus 175 ~~~Glv~~vv~~~-~l~~~a~~~a 197 (725)
.+.|++|.+++.+ ++.+.+.++.
T Consensus 243 ~~sG~~d~vv~d~~~~~~~~r~ll 266 (548)
T 2bzr_A 243 AKSGTAHYAASGEQDAFDYVRELL 266 (548)
T ss_dssp HTSSCCSEEESSHHHHHHHHHHHH
T ss_pred hccCceeEEeCCHHHHHHHHHHHH
Confidence 2699999999754 3444444433
No 315
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=96.97 E-value=0.017 Score=64.20 Aligned_cols=141 Identities=14% Similarity=0.065 Sum_probs=92.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
--++.+...+.+..+++.+.+. .+-+|.|.-.|+ +.+.+-...... ...+...+ ..+ ..+.....|+|++
T Consensus 134 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgG-----ARl~~q~~~~~~--~~~~~~i~-~~~-~~ls~~giP~Isv 203 (555)
T 3u9r_B 134 GGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGG-----ANLPRQDEVFPD--REHFGRIF-FNQ-ANMSARGIPQIAV 203 (555)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGGGGTSSS--TTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCC-----CCCCCcceeecc--cccHHHHH-HHH-HHHhcCCCCEEEE
Confidence 4789999999999999998875 466777765433 333211110000 01122222 222 2356678999999
Q ss_pred EcccccchhhHHhhhcCEEEeeC-CceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHHHH-------HH
Q 004891 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WK 176 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~~ia~~-~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~eA-------~~ 176 (725)
|.|.|.|||......||++|+.+ ++.+++ -|+...+ ..+|+.+++++. ..
T Consensus 204 v~G~~~GGga~~~a~~d~vim~e~~a~i~~--------------------aGP~vik--~~~ge~~~~e~LGGa~~h~~~ 261 (555)
T 3u9r_B 204 VMGSCTAGGAYVPAMSDETVMVREQATIFL--------------------AGPPLVK--AATGEVVSAEELGGADVHCKV 261 (555)
T ss_dssp ECSCCBGGGGHHHHTSSEEEEETTTCBCBS--------------------SCHHHHH--HHHCCCCCHHHHHBHHHHHHT
T ss_pred EecCCCccHHHHHHhCCceEEecCCceEEE--------------------ccHHHHH--HHhcCccChhhccchhhhhhc
Confidence 99999999999999999998875 454443 1222221 257899999998 88
Q ss_pred cCCcceecCcchHHHHHHHHHHHH
Q 004891 177 LGLIDAVVTSEELLKVSRLWALDI 200 (725)
Q Consensus 177 ~Glv~~vv~~~~l~~~a~~~a~~l 200 (725)
.|++|.+++.++ .+...++++
T Consensus 262 sGv~d~v~~de~---~a~~~~r~~ 282 (555)
T 3u9r_B 262 SGVADHYAEDDD---HALAIARRC 282 (555)
T ss_dssp TCSCSEEESSHH---HHHHHHHHH
T ss_pred cCceeEEeCCHH---HHHHHHHHH
Confidence 999999997653 344444444
No 316
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=96.96 E-value=0.00055 Score=71.01 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=36.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~ 348 (725)
++|.|||+|.||.+++..|++.|. +|+++||++++++...
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la 182 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 589999999999999999999998 9999999998876543
No 317
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.96 E-value=0.002 Score=67.89 Aligned_cols=96 Identities=16% Similarity=0.152 Sum_probs=62.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. . .+. .+++ +.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~-~~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA----------------------Y-GCE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------------------T-TCE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH----------------------h-CCC-cCCHHHH
Confidence 46899999999999999999885 77876 799999886654321 0 122 3444 33
Q ss_pred cc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 385 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
++ ++|+|++|+|..... ++.....+. ...+++....+....+.
T Consensus 59 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~~~ 103 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTHA--DLIERFARA--GKAIFCEKPIDLDAERV 103 (331)
T ss_dssp HHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEECSCSCSSHHHH
T ss_pred hcCCCCCEEEEeCCchhHH--HHHHHHHHc--CCcEEEecCCCCCHHHH
Confidence 44 799999999965553 333333322 22355554445555543
No 318
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.94 E-value=0.0022 Score=68.21 Aligned_cols=97 Identities=20% Similarity=0.141 Sum_probs=63.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. .+...+++ +.
T Consensus 5 ~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------g~~~~~~~~~~ 61 (354)
T 3db2_A 5 PVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY-----------------------NCAGDATMEAL 61 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH-----------------------TCCCCSSHHHH
T ss_pred cceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc-----------------------CCCCcCCHHHH
Confidence 35899999999999999999887 78865 8899998876643210 12224455 34
Q ss_pred c--cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 385 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 385 l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+ .++|+|++|+|..... ++.....+. ...+++....+....+.
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~~~ 106 (354)
T 3db2_A 62 LAREDVEMVIITVPNDKHA--EVIEQCARS--GKHIYVEKPISVSLDHA 106 (354)
T ss_dssp HHCSSCCEEEECSCTTSHH--HHHHHHHHT--TCEEEEESSSCSSHHHH
T ss_pred hcCCCCCEEEEeCChHHHH--HHHHHHHHc--CCEEEEccCCCCCHHHH
Confidence 4 5799999999976654 333332221 22355555545555443
No 319
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.93 E-value=0.00086 Score=68.17 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=49.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
++|.|||+|.||.+++..|++.|.+|++++|++++++... .+ + +. ..+++.+.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~----------~-------------~~-~~~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL----------G-------------CD-CFMEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH----------T-------------CE-EESSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC----------C-------------Ce-EecHHHhccC
Confidence 5799999999999999999999999999999998866542 11 0 11 1123445589
Q ss_pred CEEEEeccCC
Q 004891 389 DMVIEAVIES 398 (725)
Q Consensus 389 DlVIeavpe~ 398 (725)
|+||.|+|-.
T Consensus 174 DiVInaTp~G 183 (269)
T 3phh_A 174 DLIINATSAS 183 (269)
T ss_dssp SEEEECCTTC
T ss_pred CEEEEcccCC
Confidence 9999999843
No 320
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.91 E-value=0.00072 Score=72.50 Aligned_cols=97 Identities=15% Similarity=0.218 Sum_probs=59.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|+|+|+|.+|..+|+.+...|++|+++|+++++++.+.+.+ +.- .........+. +.+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~----------g~~-------~~~~~~~~~~l~~~~~~ 229 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF----------GGR-------VITLTATEANIKKSVQH 229 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTS-------EEEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc----------Cce-------EEEecCCHHHHHHHHhC
Confidence 6899999999999999999999999999999998876543210 100 00000000111 34568
Q ss_pred CCEEEEeccCChH-HHHHHHHHHHHhCCCCeEEEec
Q 004891 388 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 388 aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+|+||+|++-... ...-+.++..+.++++.+|+..
T Consensus 230 ~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 230 ADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp CSEEEECCC-------CCSCHHHHTTSCTTCEEEEC
T ss_pred CCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 9999999973321 1111124445566777766543
No 321
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.91 E-value=0.016 Score=64.24 Aligned_cols=140 Identities=16% Similarity=0.107 Sum_probs=93.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
.-++.....+.+..+++.+.+. .+-+|.|+. |.|+.+.+-... ...+...+.... + + .-..|.|++
T Consensus 104 gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~~s-----l~~~~~i~~~~~-~-~-s~~iP~Isv 169 (522)
T 1x0u_A 104 GGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGALS-----LEGYGAVFKMNV-M-A-SGVIPQITI 169 (522)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTHHH-----HHHHHHHHHHHH-H-H-TTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHHHH-----HHHHHHHHHHHH-H-h-CCCCcEEEE
Confidence 4789999999999999988865 567788875 556666543210 011111111111 1 2 345999999
Q ss_pred EcccccchhhHHhhhcCEEEeeCC-c-eEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHH-----HHH--
Q 004891 105 VEGLALGGGLELAMGCHARIAAPK-T-QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW-- 175 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~~ia~~~-a-~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~-----eA~-- 175 (725)
+.|+|.||+......||++|+.++ + .+++. |++.... .+|+.++.+ +.+
T Consensus 170 v~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~a--------------------GP~vI~~--~~ge~~~~e~lggae~~~~ 227 (522)
T 1x0u_A 170 MAGPAAGGAVYSPALTDFIIMIKGDAYYMFVT--------------------GPEITKV--VLGEEVSFQDLGGAVVHAT 227 (522)
T ss_dssp ECSEEEGGGGHHHHHSSEEEEECSTTCEEESS--------------------CHHHHHH--TTCCCCCHHHHHBHHHHHH
T ss_pred EcCCCchHHHHHHhcCCeEEEecCCccEEEec--------------------CHHHHHH--HhCCcCChhhcchHHHHhh
Confidence 999999999999999999999987 7 77652 2222211 467888764 222
Q ss_pred HcCCcceecCcc-hHHHHHHHHHHHH
Q 004891 176 KLGLIDAVVTSE-ELLKVSRLWALDI 200 (725)
Q Consensus 176 ~~Glv~~vv~~~-~l~~~a~~~a~~l 200 (725)
+.|++|.+++.+ ++.+.+.++..-+
T Consensus 228 ~~G~~d~vv~~~~~~~~~~~~ll~~l 253 (522)
T 1x0u_A 228 KSGVVHFMVDSEQEAINLTKRLLSYL 253 (522)
T ss_dssp TTCCCSEEESCHHHHHHHHHHHHHHS
T ss_pred cCceeEEEeCCHHHHHHHHHHHHHhc
Confidence 699999999854 5666666655444
No 322
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.90 E-value=0.002 Score=68.34 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=62.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .+.....+++ +.+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEK----------------------LGVEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHH----------------------HTCSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCceeCCHHHHh
Confidence 5899999999999999999875 67776 789999887664321 1111234555 334
Q ss_pred c--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 386 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+ ++|+|++|+|..... ++.....+. ...+++....+....+.
T Consensus 61 ~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~v~~EKP~~~~~~e~ 104 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTHS--ELVIACAKA--KKHVFCEKPLSLNLADV 104 (344)
T ss_dssp HCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESCSCSCHHHH
T ss_pred cCCCCCEEEEcCCCcchH--HHHHHHHhc--CCeEEEECCCCCCHHHH
Confidence 4 799999999965443 333333221 12355554445555543
No 323
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.89 E-value=0.003 Score=66.23 Aligned_cols=95 Identities=15% Similarity=0.017 Sum_probs=59.8
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHC-CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcc-cccCcccc
Q 004891 309 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYSEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~-~iA~~l~~~-G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~-~~~~~~~l 385 (725)
.||+|||+|.||. .++..+.+. +++|+++|++++++++..+. -| .-. ..+..+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~----------~g------------~~~~~~~~~~~l 60 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATR----------YR------------VSATCTDYRDVL 60 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHH----------TT------------CCCCCSSTTGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH----------cC------------CCccccCHHHHh
Confidence 5899999999998 488888764 77888999999887654321 01 101 22333555
Q ss_pred -cCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
.++|+|++|+|.... .++..+..+ .+. +++....+....+
T Consensus 61 ~~~~D~V~i~tp~~~h--~~~~~~al~---~Gk~V~~EKP~~~~~~~ 102 (323)
T 1xea_A 61 QYGVDAVMIHAATDVH--STLAAFFLH---LGIPTFVDKPLAASAQE 102 (323)
T ss_dssp GGCCSEEEECSCGGGH--HHHHHHHHH---TTCCEEEESCSCSSHHH
T ss_pred hcCCCEEEEECCchhH--HHHHHHHHH---CCCeEEEeCCCcCCHHH
Confidence 689999999995443 233333222 333 4554444455443
No 324
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.88 E-value=0.0012 Score=70.62 Aligned_cols=88 Identities=22% Similarity=0.177 Sum_probs=57.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc--ccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG--VLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~--~~~~-~~l 385 (725)
+||+|||+|.||+.+|..|++. ++|+++||++++++...+ .... ..+.. ..++ +.+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~-----------~~~~---------~~~d~~~~~~l~~ll 75 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE-----------FATP---------LKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT-----------TSEE---------EECCTTCHHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHh-----------hCCe---------EEEecCCHHHHHHHH
Confidence 6899999999999999999998 999999999998766421 1100 00000 1112 446
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
+++|+||.|+|.... ..+... .+..++.+++.
T Consensus 76 ~~~DvVIn~~P~~~~--~~v~~a---~l~~G~~~vD~ 107 (365)
T 2z2v_A 76 KEFELVIGALPGFLG--FKSIKA---AIKSKVDMVDV 107 (365)
T ss_dssp TTCSCEEECCCHHHH--HHHHHH---HHHTTCCEEEC
T ss_pred hCCCEEEECCChhhh--HHHHHH---HHHhCCeEEEc
Confidence 789999999984433 233322 23456655553
No 325
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.86 E-value=0.0027 Score=66.62 Aligned_cols=95 Identities=15% Similarity=0.079 Sum_probs=60.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l 385 (725)
.||+|||+|.||..++..+.+. +++++ ++|+++++++...+ . .+.....+++ +.+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~-----------~-----------~~~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFAS-----------R-----------YQNIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGG-----------G-----------SSSCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH-----------H-----------cCCCeEeCCHHHHh
Confidence 5899999999999999999886 56764 89999887654321 1 1112334555 345
Q ss_pred -cCCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 386 -~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
.++|+|++|+|..... ++..+.. ..+. +++-...+....+
T Consensus 60 ~~~~D~V~i~tp~~~h~--~~~~~al---~~gk~V~~EKP~~~~~~~ 101 (325)
T 2ho3_A 60 KSSFDLVYIASPNSLHF--AQAKAAL---SAGKHVILEKPAVSQPQE 101 (325)
T ss_dssp TSSCSEEEECSCGGGHH--HHHHHHH---HTTCEEEEESSCCSSHHH
T ss_pred CCCCCEEEEeCChHHHH--HHHHHHH---HcCCcEEEecCCcCCHHH
Confidence 6899999999955432 3333332 2333 5554444455543
No 326
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.85 E-value=0.0026 Score=67.54 Aligned_cols=99 Identities=16% Similarity=0.054 Sum_probs=62.3
Q ss_pred CCCcceEEEEcCCCCcH-HHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 305 ~~~~~kIaVIG~G~mG~-~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
+|+..||+|||+|.||. .++..+.+. +++|+ ++|+++++++...+.. .+...++
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~ 80 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF-----------------------GGEPVEG 80 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH-----------------------CSEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc-----------------------CCCCcCC
Confidence 34456899999999998 788888887 77876 8899998866543211 1222355
Q ss_pred c-cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCC-eEEEecCCCCChHHH
Q 004891 382 Y-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNIV 431 (725)
Q Consensus 382 ~-~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~tS~~~~~~l 431 (725)
+ +.++ ++|+|++|+|..... ++.....+ .+ .+++-..-+....+.
T Consensus 81 ~~~ll~~~~~D~V~i~tp~~~h~--~~~~~al~---aGk~Vl~EKP~a~~~~ea 129 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPLPAVLHA--EWIDRALR---AGKHVLAEKPLTTDRPQA 129 (350)
T ss_dssp HHHHHTCTTCSEEEECCCGGGHH--HHHHHHHH---TTCEEEEESSSCSSHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHHH---CCCcEEEeCCCCCCHHHH
Confidence 5 3343 689999999966554 33333332 23 355544445555443
No 327
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=96.83 E-value=0.0012 Score=69.62 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=64.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------cEEEEeCChHH--HHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEY--LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~e~--~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (725)
-||+|+|+ |.+|.+++..|+.... ++.++|+++.. ++-..-.+. . ... .....+..
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~-------~-~~~------~~~~~~~~ 90 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELE-------D-CAF------PLLDKVVV 90 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH-------H-TTC------TTEEEEEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhh-------h-cCc------cCCCcEEE
Confidence 59999997 9999999999998754 79999997643 111110111 0 000 01122333
Q ss_pred ccCc-ccccCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 379 VLDY-SEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 379 ~~~~-~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
+++. +++++||+||.+. |- +..+.+.+...|.++++|+++|+..+
T Consensus 91 ~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvs 150 (345)
T 4h7p_A 91 TADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVG 150 (345)
T ss_dssp ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred cCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeC
Confidence 4443 7799999999876 21 34455666667888888888665443
No 328
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.82 E-value=0.0023 Score=66.95 Aligned_cols=93 Identities=20% Similarity=0.110 Sum_probs=59.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
..||+|||+|.||..++..+.+. ++++ .++|+++++++...+ .+...+++ +.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~-------------------------~~~~~~~~~~~ 64 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP-------------------------GCVIESDWRSV 64 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT-------------------------TCEEESSTHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh-------------------------hCcccCCHHHH
Confidence 46899999999999999999885 6765 499999887543210 02234455 34
Q ss_pred cc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 385 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
++ ++|+|++|+|..... ++..+.. ..+. +++....+....+
T Consensus 65 l~~~~~D~V~i~tp~~~h~--~~~~~al---~~Gk~v~~eKP~~~~~~~ 108 (315)
T 3c1a_A 65 VSAPEVEAVIIATPPATHA--EITLAAI---ASGKAVLVEKPLTLDLAE 108 (315)
T ss_dssp HTCTTCCEEEEESCGGGHH--HHHHHHH---HTTCEEEEESSSCSCHHH
T ss_pred hhCCCCCEEEEeCChHHHH--HHHHHHH---HCCCcEEEcCCCcCCHHH
Confidence 43 799999999955442 3333332 2343 5555444555543
No 329
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.79 E-value=0.0026 Score=64.87 Aligned_cols=40 Identities=20% Similarity=0.084 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~ 348 (725)
++|.|||+|.||.+++..|++.|. +|++++|+.++++...
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la 160 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLA 160 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 579999999999999999999997 8999999998866543
No 330
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.79 E-value=0.0049 Score=65.16 Aligned_cols=97 Identities=13% Similarity=0.147 Sum_probs=60.2
Q ss_pred CcceEEEEcCCCCcHHHHHHHH-H-CCCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~-~-~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
.+.||+|||+|.||..++..+. + .|++| .++|+++++++...+ +-| .....+++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~----------~~g------------~~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN----------ELG------------VETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH----------TTC------------CSEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH----------HhC------------CCcccCCHH
Confidence 4568999999999999999988 5 47775 588999988665321 011 11223455
Q ss_pred cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 383 ~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
+.++ ++|+|++|+|..... ++..... ..+. +++....+....+
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h~--~~~~~al---~~G~~v~~eKp~~~~~~~ 110 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFHP--EMTIYAM---NAGLNVFCEKPLGLDFNE 110 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGHH--HHHHHHH---HTTCEEEECSCCCSCHHH
T ss_pred HHhcCCCCCEEEEeCChHhHH--HHHHHHH---HCCCEEEEcCCCCCCHHH
Confidence 3343 699999999955443 3333322 2344 4443344455544
No 331
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.78 E-value=0.002 Score=68.51 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
++|+|+|+|.||..+|..|...|.+|+++|+++++++..
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~ 212 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAA 212 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999998876654
No 332
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.77 E-value=0.0032 Score=67.16 Aligned_cols=97 Identities=18% Similarity=0.115 Sum_probs=61.4
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
|+..||+|||+|.||...+..+.+. +++|+ ++|+++++++.+. +. .+...+++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~-------------g~~~~~~~~ 58 (359)
T 3e18_A 3 LKKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QK-------------GLKIYESYE 58 (359)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TT-------------TCCBCSCHH
T ss_pred CCcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hc-------------CCceeCCHH
Confidence 3346899999999999999998876 67775 7799998754321 11 12334555
Q ss_pred cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCC-eEEEecCCCCChHHH
Q 004891 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNIV 431 (725)
Q Consensus 383 ~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~tS~~~~~~l 431 (725)
+.++ ++|+|++|+|..... ++..+..+ .+ .+++-..-+....+.
T Consensus 59 ~ll~~~~~D~V~i~tp~~~h~--~~~~~al~---aGkhVl~EKP~a~~~~ea 105 (359)
T 3e18_A 59 AVLADEKVDAVLIATPNDSHK--ELAISALE---AGKHVVCEKPVTMTSEDL 105 (359)
T ss_dssp HHHHCTTCCEEEECSCGGGHH--HHHHHHHH---TTCEEEEESSCCSSHHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH--HHHHHHHH---CCCCEEeeCCCcCCHHHH
Confidence 3343 799999999965543 33333322 33 355544444554433
No 333
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.75 E-value=0.0014 Score=67.02 Aligned_cols=40 Identities=15% Similarity=0.161 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|+|+|.||.+++..|++.|.+|+++||+.++++...
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~ 159 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELA 159 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 6899999999999999999999999999999998876654
No 334
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.69 E-value=0.0035 Score=57.17 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=63.7
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc
Q 004891 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 309 ~kIaVIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (725)
++|+|||+ |.||..++.+|.+.||+ +|++|+..... ....+.+..++++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~-------------------------~i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE-------------------------ELFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS-------------------------EETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC-------------------------cCCCEEecCCHHH
Confidence 57999999 89999999999999997 66677652100 0012344455544
Q ss_pred c-cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccC-CCCcEEE
Q 004891 385 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-SQDRIIG 443 (725)
Q Consensus 385 l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~-~~~r~ig 443 (725)
+ ..+|+++.++| .+...++++++.+.-.. .++.. +++. ..++.+... ..-+++|
T Consensus 67 l~~~vDlavi~vp--~~~~~~v~~~~~~~gi~-~i~~~-~g~~-~~~~~~~a~~~Gir~vg 122 (140)
T 1iuk_A 67 LKEPVDILDVFRP--PSALMDHLPEVLALRPG-LVWLQ-SGIR-HPEFEKALKEAGIPVVA 122 (140)
T ss_dssp CCSCCSEEEECSC--HHHHTTTHHHHHHHCCS-CEEEC-TTCC-CHHHHHHHHHTTCCEEE
T ss_pred CCCCCCEEEEEeC--HHHHHHHHHHHHHcCCC-EEEEc-CCcC-HHHHHHHHHHcCCEEEc
Confidence 4 56999999999 56666777776554333 45433 3333 334443332 3335554
No 335
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.65 E-value=0.002 Score=67.80 Aligned_cols=100 Identities=14% Similarity=0.080 Sum_probs=60.0
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
+++.||+|||+|.||..++..+.+. +.+|+ ++|+++++++...+ . .+.-...+++
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~-----------~-----------~~~~~~~~~~~ 60 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFAN-----------K-----------YHLPKAYDKLE 60 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------C-----------CCCSCEESCHH
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------H-----------cCCCcccCCHH
Confidence 4457899999999999999998875 45655 78999887544321 1 1111234555
Q ss_pred cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 383 SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 383 ~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+.+. ++|+|++|+|..... ++.....+. ...+++-..-+....+.
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--Gk~Vl~EKP~a~~~~e~ 107 (329)
T 3evn_A 61 DMLADESIDVIYVATINQDHY--KVAKAALLA--GKHVLVEKPFTLTYDQA 107 (329)
T ss_dssp HHHTCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSCCSSHHHH
T ss_pred HHhcCCCCCEEEECCCcHHHH--HHHHHHHHC--CCeEEEccCCcCCHHHH
Confidence 3444 799999999965543 333333221 22355555445555443
No 336
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.62 E-value=0.0049 Score=65.21 Aligned_cols=95 Identities=16% Similarity=0.138 Sum_probs=61.1
Q ss_pred ceEEEEcCCCCcHHHHHHHH-H-CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhc-CcccccCc-c
Q 004891 309 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLDY-S 383 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~-~i~~~~~~-~ 383 (725)
.||+|||+|.||..++..+. + .+++|+ ++|+++++++...+. .+ .....+++ +
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~----------------------~g~~~~~~~~~~~ 60 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQ----------------------YQLNATVYPNDDS 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHH----------------------TTCCCEEESSHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------------------hCCCCeeeCCHHH
Confidence 58999999999999999998 4 477766 889999887664321 11 12345565 3
Q ss_pred ccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCC-eEEEecCCCCChHH
Q 004891 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 430 (725)
Q Consensus 384 ~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~tS~~~~~~ 430 (725)
.++ ++|+|++|+|..... ++.....+ .+ .+++-..-+....+
T Consensus 61 ll~~~~~D~V~i~tp~~~h~--~~~~~al~---~Gk~vl~EKP~a~~~~e 105 (344)
T 3mz0_A 61 LLADENVDAVLVTSWGPAHE--SSVLKAIK---AQKYVFCEKPLATTAEG 105 (344)
T ss_dssp HHHCTTCCEEEECSCGGGHH--HHHHHHHH---TTCEEEECSCSCSSHHH
T ss_pred HhcCCCCCEEEECCCchhHH--HHHHHHHH---CCCcEEEcCCCCCCHHH
Confidence 343 599999999965543 33333322 33 35554444555544
No 337
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.62 E-value=0.0028 Score=64.72 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=36.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|+|+|.||.+++..|++.|.+|+++||++++++...
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la 159 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELA 159 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 5799999999999999999999999999999998866543
No 338
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.61 E-value=0.0063 Score=63.90 Aligned_cols=94 Identities=16% Similarity=0.082 Sum_probs=58.5
Q ss_pred eEEEEcCCCCcHHH-HHHHHHCCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 310 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 310 kIaVIG~G~mG~~i-A~~l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
||+|||+|.||..+ +..+.+.|++|+ ++|+++++++...+. .+ .....+++ +.++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~----------~g------------~~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATE----------NG------------IGKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------TT------------CSCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHH----------cC------------CCcccCCHHHHhc
Confidence 79999999999998 778877788865 889999886553221 11 11123444 3343
Q ss_pred --CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 387 --DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 387 --~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
++|+|++|+|.... .++..... ..+. +++....+....+
T Consensus 60 ~~~~D~V~i~tp~~~h--~~~~~~al---~~Gk~v~~ekP~~~~~~~ 101 (332)
T 2glx_A 60 DPDVDAVYVSTTNELH--REQTLAAI---RAGKHVLCEKPLAMTLED 101 (332)
T ss_dssp CTTCCEEEECSCGGGH--HHHHHHHH---HTTCEEEECSSSCSSHHH
T ss_pred CCCCCEEEEeCChhHh--HHHHHHHH---HCCCeEEEeCCCcCCHHH
Confidence 59999999995544 23333332 2344 4443334444443
No 339
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.58 E-value=0.032 Score=61.97 Aligned_cols=163 Identities=13% Similarity=0.116 Sum_probs=100.5
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCC
Q 004891 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (725)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (725)
|+|.. -+++++..+.+.+.++.+... .+-+|.|.-.++ |..|.+-. ..........++ ..+....
T Consensus 332 ~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~G-~~~G~~~E----------~~G~~~~~Ak~l-~~~~~~~ 398 (522)
T 1x0u_A 332 NNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTPG-YVPGTDQE----------YKGIIRHGAKML-YAFAEAT 398 (522)
T ss_dssp ECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCSHHHH----------HTTHHHHHHHHH-HHHHHCC
T ss_pred ECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCCC-CCCchHHH----------HHHHHHHHHHHH-HHHHhCC
Confidence 45542 589999999999999988754 667777764332 33222211 111122333455 5688899
Q ss_pred CcEEEEEcccccchhhHHhhh----cCEEEeeCCceEeCcccccCCCCCchhhchHhhh-hCH----HHH-HHHHH--cC
Q 004891 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL----SKA-IEMML--LS 166 (725)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala----cD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~-vG~----~~a-~~l~l--~g 166 (725)
.|.|+.|-|.|.|||+..... +|+++|.++|.+++-. +-|.+..+-+. +-. ... .++.- .-
T Consensus 399 vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~g-------pegaa~Il~r~~i~~~~d~~~~~~~l~~~y~~ 471 (522)
T 1x0u_A 399 VPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTG-------PEGAVRILYRKEIQQASNPDDVLKQRIAEYRK 471 (522)
T ss_dssp SCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSC-------HHHHHHHHTSSSSSSSSSSSSSSHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEecC-------HHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999999998755444 9999999988877532 22222222211 100 000 00110 00
Q ss_pred CCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 004891 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (725)
Q Consensus 167 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (725)
..-++..+.+.|+||.|+++.++.+......+.+..+
T Consensus 472 ~~~~~~~~~~~G~iD~II~p~~tR~~L~~~L~~~~~~ 508 (522)
T 1x0u_A 472 LFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLKTK 508 (522)
T ss_dssp HHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred hcCCHHHHHhcCCCcEeECHHHHHHHHHHHHHHHhhc
Confidence 1236678999999999999988877776666665443
No 340
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.57 E-value=0.0051 Score=65.50 Aligned_cols=99 Identities=15% Similarity=0.178 Sum_probs=62.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHH-H-CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhc-CcccccC
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALK-MLKGVLD 381 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~-~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~-~i~~~~~ 381 (725)
|+..||+|||+|.||...+..+. + .+++|+ ++|+++++++...+. .+ .....++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~g~~~~~~~~ 78 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK----------------------YAIEAKDYND 78 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH----------------------HTCCCEEESS
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH----------------------hCCCCeeeCC
Confidence 34468999999999999999998 4 477866 799999887664321 11 1233455
Q ss_pred c-cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 382 Y-SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 382 ~-~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
+ +.++ ++|+|++|+|..... ++.....+. ...+++-..-+....+
T Consensus 79 ~~~ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--Gk~Vl~EKPla~~~~e 126 (357)
T 3ec7_A 79 YHDLINDKDVEVVIITASNEAHA--DVAVAALNA--NKYVFCEKPLAVTAAD 126 (357)
T ss_dssp HHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSSCSSHHH
T ss_pred HHHHhcCCCCCEEEEcCCcHHHH--HHHHHHHHC--CCCEEeecCccCCHHH
Confidence 5 3343 689999999965543 443333321 1235554444555544
No 341
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.54 E-value=0.00038 Score=71.27 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~ 346 (725)
++|.|||+|.||.+++..|++.|. +|++++|+.++++.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 579999999999999999999999 99999999877543
No 342
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.51 E-value=0.0084 Score=65.01 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|+|+|.+|..+|..|.+.|++|+++|.|++.++.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~ 44 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR 44 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 4699999999999999999999999999999999987653
No 343
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.51 E-value=0.012 Score=53.75 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=54.8
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCccc
Q 004891 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (725)
Q Consensus 309 ~kIaVIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (725)
++|+|||+ |.+|..++..|.+.||+ +|++|+.. +. ...+....++++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHHH
Confidence 57999999 79999999999999997 55655542 00 012334445544
Q ss_pred c-cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEE
Q 004891 385 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (725)
Q Consensus 385 l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (725)
+ ..+|++|.++| .+...+++.++.+.- ...++.
T Consensus 74 l~~~vDlvvi~vp--~~~~~~vv~~~~~~g-i~~i~~ 107 (144)
T 2d59_A 74 IPDKIEVVDLFVK--PKLTMEYVEQAIKKG-AKVVWF 107 (144)
T ss_dssp CSSCCSEEEECSC--HHHHHHHHHHHHHHT-CSEEEE
T ss_pred cCCCCCEEEEEeC--HHHHHHHHHHHHHcC-CCEEEE
Confidence 4 57999999999 566677777765542 335553
No 344
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.51 E-value=0.004 Score=68.15 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=60.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
++|.|+|+|.||.++|..|+..|.+|+++|++++..+.+.. .+ ....+..+.+..+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-----------~g-------------~dv~~lee~~~~a 321 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-----------EG-------------LQVLTLEDVVSEA 321 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECCGGGTTTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------hC-------------CccCCHHHHHHhc
Confidence 67999999999999999999999999999999887655431 11 1112222567889
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
|+|+++....-.+.. +..+.++++.+|+...
T Consensus 322 DvVi~atG~~~vl~~----e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 322 DIFVTTTGNKDIIML----DHMKKMKNNAIVCNIG 352 (488)
T ss_dssp SEEEECSSCSCSBCH----HHHTTSCTTEEEEESS
T ss_pred CEEEeCCCChhhhhH----HHHHhcCCCeEEEEcC
Confidence 999988643222222 2345578888886443
No 345
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.47 E-value=0.0024 Score=65.60 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=37.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i 351 (725)
+++.|+|+|-+|.+++..|++.|. +|++++|++++++...+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 689999999999999999999999 6999999999877665443
No 346
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.47 E-value=0.0035 Score=66.80 Aligned_cols=98 Identities=11% Similarity=0.045 Sum_probs=61.0
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
|+..||+|||+|.||.. ++..+.+. +.+|+ ++|+++++++...+ . .+.....+++
T Consensus 3 M~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~-----------~-----------~~~~~~~~~~ 60 (359)
T 3m2t_A 3 LSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHR-----------F-----------ISDIPVLDNV 60 (359)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGG-----------T-----------SCSCCEESSH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------h-----------cCCCcccCCH
Confidence 34468999999999985 88888775 67876 88999988655321 1 1223445666
Q ss_pred c-ccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCC-eEEEecCCCCChHH
Q 004891 383 S-EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 430 (725)
Q Consensus 383 ~-~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~tS~~~~~~ 430 (725)
+ .++ +.|+|++|+|.... .++..+..+ .+ .+++-..-+....+
T Consensus 61 ~~ll~~~~vD~V~i~tp~~~H--~~~~~~al~---aGkhVl~EKPla~~~~e 107 (359)
T 3m2t_A 61 PAMLNQVPLDAVVMAGPPQLH--FEMGLLAMS---KGVNVFVEKPPCATLEE 107 (359)
T ss_dssp HHHHHHSCCSEEEECSCHHHH--HHHHHHHHH---TTCEEEECSCSCSSHHH
T ss_pred HHHhcCCCCCEEEEcCCcHHH--HHHHHHHHH---CCCeEEEECCCcCCHHH
Confidence 3 343 56999999994433 344443332 33 35554444455443
No 347
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.41 E-value=0.0038 Score=62.88 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCh
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (725)
++|.|||+|.+|+.+|..|++.|. +++++|.+.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999997
No 348
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.38 E-value=0.0056 Score=62.43 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=36.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~ 349 (725)
+++.|+|+|.+|.+++..|++.|. +|++++|++++++...+
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~ 162 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRN 162 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 689999999999999999999996 99999999988776543
No 349
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.34 E-value=0.0025 Score=69.11 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=50.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~ 386 (725)
++|+|||+|.||..+++.+...|. +|+++|+++++++...+.+ |. ..+. ..++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~----------~~~~-~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GG----------EAVR-FDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TC----------EECC-GGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC----------ceec-HHhHHHHhc
Confidence 589999999999999999999999 9999999998764332111 10 0011 1122 3457
Q ss_pred CCCEEEEeccCCh
Q 004891 387 DVDMVIEAVIESV 399 (725)
Q Consensus 387 ~aDlVIeavpe~~ 399 (725)
++|+||+|++...
T Consensus 227 ~aDvVi~at~~~~ 239 (404)
T 1gpj_A 227 RSDVVVSATAAPH 239 (404)
T ss_dssp TCSEEEECCSSSS
T ss_pred CCCEEEEccCCCC
Confidence 8999999997544
No 350
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=96.26 E-value=0.063 Score=59.61 Aligned_cols=137 Identities=12% Similarity=0.120 Sum_probs=87.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
--++.....+.+.++++.+.+. .+-+|.|.-. .|+.+.+-... ...+...+.... ......|+|++
T Consensus 111 gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dS-----gGAR~qeg~~~-----l~g~~~~~~~~~---~~s~~iP~Isv 176 (527)
T 1vrg_A 111 GGSLGEMHAKKIVKLLDLALKM-GIPVIGINDS-----GGARIQEGVDA-----LAGYGEIFLRNT---LASGVVPQITV 176 (527)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEE-----CSBCGGGTHHH-----HHHHHHHHHHHH---HHTTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEECC-----CCCCccchhHH-----HHHHHHHHHHHH---HhCCCCCEEEE
Confidence 4789999999999999988765 4556777543 34444321110 001111111111 23456999999
Q ss_pred EcccccchhhHHhhhcCEEEeeCC-ceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCCCHH-----HHH--H
Q 004891 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--K 176 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~~ia~~~-a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~~a~-----eA~--~ 176 (725)
|.|.|.|||......||++||.++ +.+++ .|+..... .+|+.++.+ +.+ +
T Consensus 177 v~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi~~--~~ge~v~~e~lggae~~~~~ 234 (527)
T 1vrg_A 177 IAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVIKA--VTGEEISQEDLGGAMVHNQK 234 (527)
T ss_dssp EEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHHH--HHCCCCCHHHHHBHHHHHHT
T ss_pred EeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHHHH--HhCCCCCccccccHHHHhhc
Confidence 999999999988889999999987 66443 13222221 467777764 222 6
Q ss_pred cCCcceecCcc-hHHHHHHHHH
Q 004891 177 LGLIDAVVTSE-ELLKVSRLWA 197 (725)
Q Consensus 177 ~Glv~~vv~~~-~l~~~a~~~a 197 (725)
.|++|.+++.+ ++.+.+.++.
T Consensus 235 ~G~vd~vv~d~~~~~~~~~~~L 256 (527)
T 1vrg_A 235 SGNAHFLADNDEKAMSLVRTLL 256 (527)
T ss_dssp SCCCSEEESSHHHHHHHHHHHH
T ss_pred ccceEEEecCHHHHHHHHHHHH
Confidence 99999999754 4544444443
No 351
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.23 E-value=0.0063 Score=63.21 Aligned_cols=67 Identities=15% Similarity=0.125 Sum_probs=43.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHH-CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 308 VRKVAVIGGGLMGSGIATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
..||+|||+|.||..++..+.+ .+++|+ ++|+++++++. .|. .....+++...
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~-----------~~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ-----------PFRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT-----------TSCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC-----------CcCCHHHHHhC
Confidence 4589999999999999999987 467877 78999876321 110 01112333333
Q ss_pred cCCCEEEEeccCCh
Q 004891 386 KDVDMVIEAVIESV 399 (725)
Q Consensus 386 ~~aDlVIeavpe~~ 399 (725)
.++|+||+|+|...
T Consensus 64 ~~~DvViiatp~~~ 77 (304)
T 3bio_A 64 ESVDVALVCSPSRE 77 (304)
T ss_dssp SSCCEEEECSCHHH
T ss_pred CCCCEEEECCCchh
Confidence 78999999999433
No 352
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.23 E-value=0.0016 Score=68.45 Aligned_cols=98 Identities=18% Similarity=0.150 Sum_probs=63.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC--c-----EEEEeCCh--HHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc
Q 004891 309 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (725)
Q Consensus 309 ~kIaVIG-~G~mG~~iA~~l~~~G~--~-----V~~~d~~~--e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (725)
.||+|+| +|.+|+++|..|+..|. + ++++|+++ +.++.....+.+ .. .. ....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~-------~~-~~------~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD-------CA-LP------LLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH-------TC-CT------TEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh-------hh-hc------ccCCEEE
Confidence 6899999 79999999999999887 6 99999975 232221111111 00 00 0122333
Q ss_pred ccC-cccccCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEE
Q 004891 379 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA 420 (725)
Q Consensus 379 ~~~-~~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~ 420 (725)
+++ ++++++||+||.+. |. +..+.+.+...+.++.+++.+++
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vi 126 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVI 126 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 333 47899999999875 21 33456667777888877765343
No 353
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.20 E-value=0.0048 Score=65.90 Aligned_cols=38 Identities=34% Similarity=0.365 Sum_probs=33.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
+||.|||+|.+|+.+|..|++ .++|++.|++.+.++++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~ 54 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV 54 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH
Confidence 589999999999999998865 58999999999887764
No 354
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.16 E-value=0.0051 Score=62.96 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=35.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~ 347 (725)
+++.|+|+|-+|.+++..|++.|. +|++++|+.++++..
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999998 899999999886553
No 355
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.16 E-value=0.0021 Score=69.51 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
.+|+|||+|.+|..+++.+...|.+|+++|++++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999876654
No 356
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.13 E-value=0.011 Score=60.28 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
++||.|+|+|.+|+.++..|++.|++|++.+|+++..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhh
Confidence 478999999999999999999999999999999876544
No 357
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.12 E-value=0.0031 Score=67.31 Aligned_cols=98 Identities=17% Similarity=0.179 Sum_probs=60.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-ccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~l~~ 387 (725)
++|.|+|+|.+|..+++.+...|.+|+++|+++++++.+.+... ..+..-..+.. +. +.+.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----~~~~~~~~~~~-------------~~~~~~~~ 230 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----SRVELLYSNSA-------------EIETAVAE 230 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----GGSEEEECCHH-------------HHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----ceeEeeeCCHH-------------HHHHHHcC
Confidence 78999999999999999999999999999999998776542110 00000000111 11 34568
Q ss_pred CCEEEEeccCChHHHHH-HHHHHHHhCCCCeEEEecC
Q 004891 388 VDMVIEAVIESVPLKQK-IFSELEKACPPHCILATNT 423 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~-v~~~l~~~~~~~~ii~s~t 423 (725)
+|+||+|++-....... +.++..+.++++.+++...
T Consensus 231 ~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv~ 267 (361)
T 1pjc_A 231 ADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDVA 267 (361)
T ss_dssp CSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEETT
T ss_pred CCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEEe
Confidence 99999999632210000 1123334567777666543
No 358
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.09 E-value=0.011 Score=62.78 Aligned_cols=107 Identities=14% Similarity=0.154 Sum_probs=63.0
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCCC--c---EEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc-c
Q 004891 308 VRKVAVIG-GGLMGSGIATAHILNNI--Y---VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-L 380 (725)
Q Consensus 308 ~~kIaVIG-~G~mG~~iA~~l~~~G~--~---V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~ 380 (725)
..||+||| +|.+|.++|..++..+. + |.++|.+.+..+...+...- + +..+.. ..+..+..+ .
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~am--D--L~h~~~------p~~~~v~i~~~ 101 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAM--E--LEDSLY------PLLREVSIGID 101 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHH--H--HHTTTC------TTEEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHH--h--HHhhhh------hhcCCcEEecC
Confidence 46899999 79999999999999876 3 88876654432221111100 0 111100 001122333 4
Q ss_pred CcccccCCCEEEEec--cC------------ChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 381 DYSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 381 ~~~~l~~aDlVIeav--pe------------~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
+++++++||+||.+. |- +..+.+.+...+.++..++++++..|.
T Consensus 102 ~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 102 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 568999999999875 21 223444555567777667787765443
No 359
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.09 E-value=0.021 Score=60.80 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=60.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-c
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 384 (725)
..||+|||+|.||..++..+.+. ++++ .++|+++++++...+. .+. . ......++++ .
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~----------~~~-~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA----------NNY-P--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------TTC-C--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hCC-C--------CCCeeeCCHHHH
Confidence 46899999999999999998875 5665 5889999876554221 110 0 0123345553 3
Q ss_pred cc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 385 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
++ ++|+|++|+|..... ++..+. +..+. +++-...+....+
T Consensus 67 l~~~~~D~V~i~tp~~~h~--~~~~~a---l~aGk~V~~EKP~a~~~~e 110 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLHV--EWAIKA---AEKGKHILLEKPVAMNVTE 110 (362)
T ss_dssp HHCTTCCEEEECCCGGGHH--HHHHHH---HTTTCEEEECSSCSSSHHH
T ss_pred hcCCCCCEEEEcCChHHHH--HHHHHH---HHCCCeEEEecCCcCCHHH
Confidence 43 699999999955543 333332 33444 4443333455443
No 360
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.08 E-value=0.018 Score=60.61 Aligned_cols=96 Identities=13% Similarity=0.005 Sum_probs=60.6
Q ss_pred cceEEEEcCCCCcH-HHHHHHHHCCCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 308 VRKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 308 ~~kIaVIG~G~mG~-~iA~~l~~~G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
..||||||+|.||. .++..+...|++| .++|+++++++...+. .+.....+++ +.
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSL----------------------FPSVPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHH----------------------STTCCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHh----------------------cCCCcccCCHHHH
Confidence 45899999999996 6777777788986 5899999876654321 1123345555 33
Q ss_pred cc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 385 l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
++ ++|+|++|+|..... ++..... ..+. +++-...+....+
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~al---~aGkhVl~EKP~a~~~~e 105 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDRA--ELALRTL---DAGKDFFTAKPPLTTLEQ 105 (336)
T ss_dssp HTCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEECSSCCSCHHH
T ss_pred hhCCCCCEEEEeCChhhHH--HHHHHHH---HCCCcEEEeCCCCCCHHH
Confidence 43 699999999966553 3333322 2343 5554434455443
No 361
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.06 E-value=0.0067 Score=62.47 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=50.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
++|.|+|+|.||.++|..|++.| +|+++||+.++++...+.+.... ... . .. .+...+-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~----~~~---~-~~-----~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL----NKK---F-GE-----EVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH----TCC---H-HH-----HEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc----ccc---c-ce-----eEEEeeHHHhhCCC
Confidence 57999999999999999999999 99999999988766544332110 000 0 00 01111113567889
Q ss_pred CEEEEecc
Q 004891 389 DMVIEAVI 396 (725)
Q Consensus 389 DlVIeavp 396 (725)
|+||.|++
T Consensus 195 DilVn~ag 202 (287)
T 1nvt_A 195 DIIINATP 202 (287)
T ss_dssp CEEEECSC
T ss_pred CEEEECCC
Confidence 99999987
No 362
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=96.03 E-value=0.018 Score=62.42 Aligned_cols=153 Identities=17% Similarity=0.137 Sum_probs=81.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCC---C-CHHHHHHh--hcCccccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGK---L-TQDKANNA--LKMLKGVL 380 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~---~-~~~~~~~~--~~~i~~~~ 380 (725)
-||||||+|.||..++..+.+. +.+| .++|+++++++...+... . .... . +..+.... .+....++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~y---G---~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAY---G---DEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHH---S---SSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhc---C---CccccccccchhhhhhhhccCCceEEC
Confidence 5799999999999999887754 5554 578999998776543210 0 0000 0 11111111 12344567
Q ss_pred Ccc-ccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChH---HHhcccCCCCcEEEEecCCCCCCCC
Q 004891 381 DYS-EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVMP 454 (725)
Q Consensus 381 ~~~-~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~---~l~~~~~~~~r~ig~h~~~p~~~~~ 454 (725)
|++ .++ +.|+|++|+|....-..-....+ ..+.=|++........ ++.+.......+
T Consensus 98 D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL----~AGKHVv~~nk~l~~~eg~eL~~~A~e~Gvv------------- 160 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIPEVGAETGIAAI----RNGKHLVMMNVEADVTIGPYLKAQADKQGVI------------- 160 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCHHHHHHHHHHHH----HTTCEEEECCHHHHHHHHHHHHHHHHHHTCC-------------
T ss_pred CHHHHhcCCCCCEEEEcCCChHHHHHHHHHHH----HcCCcEEecCcccCHHHHHHHHHHHHHhCCe-------------
Confidence 774 343 68999999974321122222223 3333333211222221 222222111111
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004891 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (725)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~ 487 (725)
+.......+..+..+.++.+.+|..++.++
T Consensus 161 ---l~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 161 ---YSLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ---EEECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ---eeecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 111222347778888899999999999986
No 363
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.02 E-value=0.0032 Score=69.15 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=36.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
.+++|.|+|+|.||..++..|++.|++|+++|+++++++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 41 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHH
Confidence 3578999999999999999999999999999999877654
No 364
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.02 E-value=0.0035 Score=65.23 Aligned_cols=41 Identities=15% Similarity=0.251 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC---hHHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~e~~~~~~~ 349 (725)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...+
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~ 199 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVE 199 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHH
Confidence 689999999999999999999999 89999999 776665443
No 365
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.01 E-value=0.025 Score=55.56 Aligned_cols=130 Identities=12% Similarity=0.142 Sum_probs=77.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~a 388 (725)
++|.|||+|.+|..-+..|.++|.+|++++.+.... +..+.+.+.+. .+.-.-..+.+.++
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~----------l~~l~~~~~i~---------~i~~~~~~~dL~~a 92 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAE----------INEWEAKGQLR---------VKRKKVGEEDLLNV 92 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHH----------HHHHHHTTSCE---------EECSCCCGGGSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHH----------HHHHHHcCCcE---------EEECCCCHhHhCCC
Confidence 689999999999999999999999999999764321 11122223221 11111123678899
Q ss_pred CEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcccCCCCcEEEEecCCCC--CCCCeeeEecCCCCCH
Q 004891 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTSA 466 (725)
Q Consensus 389 DlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~~~~~~r~ig~h~~~p~--~~~~lveii~~~~t~~ 466 (725)
|+||.|. ++..+...+.. .++.+..+ |...-+ +. ..|+.|. ..+++.-.|.+.+.+|
T Consensus 93 dLVIaAT-~d~~~N~~I~~----~ak~gi~V--NvvD~p-----~~---------~~f~~Paiv~rg~l~iaIST~G~sP 151 (223)
T 3dfz_A 93 FFIVVAT-NDQAVNKFVKQ----HIKNDQLV--NMASSF-----SD---------GNIQIPAQFSRGRLSLAISTDGASP 151 (223)
T ss_dssp SEEEECC-CCTHHHHHHHH----HSCTTCEE--EC----------C---------CSEECCEEEEETTEEEEEECTTSCH
T ss_pred CEEEECC-CCHHHHHHHHH----HHhCCCEE--EEeCCc-----cc---------CeEEEeeEEEeCCEEEEEECCCCCc
Confidence 9999764 55555444433 34433333 222111 00 1122222 2345666677777889
Q ss_pred HHHHHHHHHHHH
Q 004891 467 QVILDLMTVGKI 478 (725)
Q Consensus 467 e~~~~~~~l~~~ 478 (725)
.....++.-++.
T Consensus 152 ~la~~iR~~ie~ 163 (223)
T 3dfz_A 152 LLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 988888887765
No 366
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.99 E-value=0.0083 Score=63.52 Aligned_cols=75 Identities=13% Similarity=0.128 Sum_probs=51.1
Q ss_pred CCCcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 305 PRGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 305 ~~~~~kIaVIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
.++|-||||||+|.||.. .+..+.+. +.+|+ ++|+++++++...++ .+.-...+|
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~d 77 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADR----------------------FSVPHAFGS 77 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHH----------------------HTCSEEESS
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH----------------------cCCCeeeCC
Confidence 346779999999999975 45666654 66776 789999987665332 122234566
Q ss_pred ccc-c--cCCCEEEEeccCChHH
Q 004891 382 YSE-F--KDVDMVIEAVIESVPL 401 (725)
Q Consensus 382 ~~~-l--~~aDlVIeavpe~~~~ 401 (725)
++. + .+.|+|++|+|.....
T Consensus 78 ~~ell~~~~iDaV~I~tP~~~H~ 100 (350)
T 4had_A 78 YEEMLASDVIDAVYIPLPTSQHI 100 (350)
T ss_dssp HHHHHHCSSCSEEEECSCGGGHH
T ss_pred HHHHhcCCCCCEEEEeCCCchhH
Confidence 643 3 4689999999966554
No 367
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.98 E-value=0.0092 Score=58.49 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=34.1
Q ss_pred cceEEEEcC-CCCcHHHHHHHH-HCCCcEEEEeCChH-HHHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLK 346 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~-~~G~~V~~~d~~~e-~~~~ 346 (725)
|++|.|+|+ |.+|..++..|+ +.|++|++.+|+++ .++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 456999995 999999999999 89999999999987 6443
No 368
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.96 E-value=0.02 Score=60.22 Aligned_cols=97 Identities=11% Similarity=0.035 Sum_probs=60.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC---Cc-EEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-
Q 004891 309 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 383 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G---~~-V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 383 (725)
.||||||+|.||..++..+.+.+ ++ |.++|+++++++...+.. +.-...++++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~----------------------~~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKH----------------------DIPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHH----------------------TCSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHc----------------------CCCcccCCHHH
Confidence 58999999999999999887654 34 457899998876643211 1112345553
Q ss_pred ccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 384 EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 384 ~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
.++ ++|+|++|+|..... ++..+..+. ...+++-..-+....+.
T Consensus 61 ll~~~~vD~V~i~tp~~~H~--~~~~~al~~--GkhVl~EKP~a~~~~e~ 106 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK--AAVMLCLAA--GKAVLCEKPMGVNAAEV 106 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH--HHHHHHHHT--TCEEEEESSSSSSHHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHHHhc--CCEEEEECCCCCCHHHH
Confidence 343 699999999966553 333333221 22355554445555443
No 369
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=95.86 E-value=0.017 Score=58.68 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=53.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+++.|+|+|-.+++++..|++.|. +|++++|+.++++...+.+... ...+......+.+++
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~------------------~~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNG------------------FPGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHH------------------CTTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhcc------------------CCcceehhhhhhhhc
Confidence 579999999999999999999996 8999999999877765433211 112223334456788
Q ss_pred CCEEEEecc
Q 004891 388 VDMVIEAVI 396 (725)
Q Consensus 388 aDlVIeavp 396 (725)
+|+||.|.|
T Consensus 188 ~dliiNaTp 196 (269)
T 3tum_A 188 FDLVANASP 196 (269)
T ss_dssp CSEEEECSS
T ss_pred ccccccCCc
Confidence 999999987
No 370
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.86 E-value=0.0042 Score=66.84 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
.+|+|||+|.+|...++.+...|.+|+++|+++++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999998876654
No 371
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.83 E-value=0.031 Score=61.08 Aligned_cols=102 Identities=12% Similarity=0.032 Sum_probs=61.0
Q ss_pred CCcceEEEEcCCCCcH-HHHHHHHHC-CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~-~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
+...||+|||+|.||. .++..+.+. +++| .++|+++++++...+. -| +.. ..+...+++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~~~-------~~~~~~~~~ 142 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE----------YG-VDP-------RKIYDYSNF 142 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH----------TT-CCG-------GGEECSSSG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CCc-------ccccccCCH
Confidence 3456899999999997 899888775 5675 5899999876654321 11 000 012234555
Q ss_pred -cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 383 -SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 383 -~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
+.+. ++|+|++|+|..... ++..... ..+. +++-...+....+
T Consensus 143 ~~ll~~~~vD~V~iatp~~~h~--~~~~~al---~aGk~Vl~EKPla~~~~e 189 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILPNSLHA--EFAIRAF---KAGKHVMCEKPMATSVAD 189 (433)
T ss_dssp GGGGGCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEECSSCCSSHHH
T ss_pred HHHhcCCCCCEEEEcCCchhHH--HHHHHHH---HCCCcEEEcCCCCCCHHH
Confidence 3444 799999999965543 3333332 2333 5554334445443
No 372
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=95.81 E-value=0.015 Score=63.02 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=37.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC---CcEEEEeCChHHHHHHHHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIKT 350 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G---~~V~~~d~~~e~~~~~~~~ 350 (725)
|+||+|+|+|.+|..++..|++.| .+|+++|+++++++...+.
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~ 46 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQS 46 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHH
Confidence 468999999999999999999998 3899999999987765543
No 373
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.78 E-value=0.01 Score=58.96 Aligned_cols=39 Identities=15% Similarity=-0.049 Sum_probs=34.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
-++|.|+|+|.+|..+|..|.+.|+ |+++|++++.++.+
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~ 47 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL 47 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence 3589999999999999999999999 99999999886553
No 374
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.75 E-value=0.047 Score=53.86 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=35.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
-++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 468999998 999999999999999999999999887654
No 375
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.73 E-value=0.062 Score=57.10 Aligned_cols=97 Identities=7% Similarity=0.094 Sum_probs=60.7
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHCCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-cc
Q 004891 309 RKVAVIGGGLMGS-GIATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~-~iA~~l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 385 (725)
.||||||+|.+|. .++..+...|.+|+ ++|+++++++...+. .+.....++++ .+
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~ll 84 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAV----------------------YADARRIATAEEIL 84 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------------------SSSCCEESCHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHHHh
Confidence 5899999999995 57777777888855 889999987664321 12233456663 34
Q ss_pred c--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 386 ~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+ +.|+|++|+|.... .++.....+. ...+++-..-+....+.
T Consensus 85 ~~~~vD~V~I~tp~~~H--~~~~~~al~a--GkhVl~EKPla~~~~ea 128 (361)
T 3u3x_A 85 EDENIGLIVSAAVSSER--AELAIRAMQH--GKDVLVDKPGMTSFDQL 128 (361)
T ss_dssp TCTTCCEEEECCCHHHH--HHHHHHHHHT--TCEEEEESCSCSSHHHH
T ss_pred cCCCCCEEEEeCChHHH--HHHHHHHHHC--CCeEEEeCCCCCCHHHH
Confidence 3 58999999994433 3444433321 22355554445555443
No 376
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.71 E-value=0.0034 Score=61.58 Aligned_cols=38 Identities=24% Similarity=0.240 Sum_probs=34.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
+||.|+|+ |.+|+.++..|++.|++|++.+|+++.++.
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 36999998 999999999999999999999999887543
No 377
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.64 E-value=0.01 Score=63.17 Aligned_cols=70 Identities=16% Similarity=0.157 Sum_probs=48.1
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
+..||||||+|.||.. .+..+.+. +++|+ ++|++++++.+ ........++++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~~ 58 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------------------DFPDAEVVHELE 58 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------------------HCTTSEEESSTH
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------------------hCCCCceECCHH
Confidence 4468999999999997 56666554 67765 78999865221 011234456663
Q ss_pred -ccc--CCCEEEEeccCChHH
Q 004891 384 -EFK--DVDMVIEAVIESVPL 401 (725)
Q Consensus 384 -~l~--~aDlVIeavpe~~~~ 401 (725)
.++ ++|+|++|+|.....
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H~ 79 (358)
T 3gdo_A 59 EITNDPAIELVIVTTPSGLHY 79 (358)
T ss_dssp HHHTCTTCCEEEECSCTTTHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH
Confidence 344 799999999976654
No 378
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.59 E-value=0.0096 Score=63.50 Aligned_cols=70 Identities=19% Similarity=0.227 Sum_probs=47.9
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-
Q 004891 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (725)
++.||+|||+|.||.. .+..+.+. +++|+ ++|+++++++.. .......+++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-------------------------~~~~~~~~~~~ 60 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-------------------------LPDVTVIASPE 60 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-------------------------CTTSEEESCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-------------------------CCCCcEECCHH
Confidence 3468999999999997 56666654 77775 889998764310 1123345566
Q ss_pred cccc--CCCEEEEeccCChHH
Q 004891 383 SEFK--DVDMVIEAVIESVPL 401 (725)
Q Consensus 383 ~~l~--~aDlVIeavpe~~~~ 401 (725)
+.++ +.|+|++|+|.....
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H~ 81 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATHA 81 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGHH
T ss_pred HHhcCCCCCEEEEeCChHHHH
Confidence 3344 799999999965554
No 379
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.56 E-value=0.0087 Score=65.94 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=36.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCcEEEEeCChHHHHHH
Q 004891 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~iA~~l~~~-G~~V~~~d~~~e~~~~~ 347 (725)
.+++|.|+|+|.+|.+++..|++. |++|+++||++++++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 457899999999999999999998 78999999998876653
No 380
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.51 E-value=0.015 Score=60.31 Aligned_cols=40 Identities=15% Similarity=0.199 Sum_probs=35.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC---hHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~---~e~~~~~~ 348 (725)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .++++...
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la 192 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFA 192 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHH
Confidence 689999999999999999999998 89999999 66655543
No 381
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.49 E-value=0.011 Score=60.47 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=54.1
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+++.|||.|. +|.++|..|.+.|..|+++++....++. .+.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 6899999865 8999999999999999999984433220 023578
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++-..-++. +.++++++|++..+
T Consensus 211 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYVKG-------EWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCcH-------HhcCCCcEEEEEec
Confidence 9999999974322322 34688998886544
No 382
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.48 E-value=0.0088 Score=65.88 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=37.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
+||-|+|+|.+|..+|..|...|++|+++|.|++.++.+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~ 43 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ 43 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999999987654
No 383
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=95.48 E-value=0.13 Score=51.18 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=76.7
Q ss_pred ccccc-CcccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHHhcc---cCCC-CcEEEEecCCCC
Q 004891 376 LKGVL-DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK---TSSQ-DRIIGAHFFSPA 450 (725)
Q Consensus 376 i~~~~-~~~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l~~~---~~~~-~r~ig~h~~~p~ 450 (725)
+..++ |.++++++|++|.-.|..- ..-.+.+++.++++.++|| +||.+++...+... +.+. -.+..+||-.-|
T Consensus 129 VkVtsDD~EAvk~AEi~IlftPfG~-~t~~Iakkii~~lpEgAII-~nTCTipp~~ly~~le~l~R~DvgIsS~HPaaVP 206 (358)
T 2b0j_A 129 LKVTSDDREAVEGADIVITWLPKGN-KQPDIIKKFADAIPEGAIV-THACTIPTTKFAKIFKDLGREDLNITSYHPGCVP 206 (358)
T ss_dssp CEEESCHHHHHTTCSEEEECCTTCT-THHHHHHHHGGGSCTTCEE-EECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCT
T ss_pred cEeecchHHHhcCCCEEEEecCCCC-CcHHHHHHHHhhCcCCCEE-ecccCCCHHHHHHHHHHhCcccCCeeccCCCCCC
Confidence 44444 4589999999999998533 3447889999999999988 56778877655443 3332 356777775433
Q ss_pred CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004891 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (725)
Q Consensus 451 ~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~ 487 (725)
.. ..-....-...++|.++++..+.+..|+.++++.
T Consensus 207 gt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 207 EM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp TT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CC-CCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 22 2222334445689999999999999999999873
No 384
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.47 E-value=0.13 Score=57.10 Aligned_cols=163 Identities=12% Similarity=0.080 Sum_probs=100.6
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCC
Q 004891 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (725)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (725)
|+|.. -.++++-.....+.++.++. ..+-+|.|-=.+ .|..|.+-.+ ......+..++ ..+....
T Consensus 337 ~~~~~~~G~~~~~~~~Kaar~i~~a~~-~~~Plv~lvDtp-G~~~G~~~E~----------~g~~~~~A~~~-~a~~~~~ 403 (527)
T 1vrg_A 337 NQPSVLAGVLDIDSSDKAARFIRFLDA-FNIPILTFVDTP-GYLPGVAQEH----------GGIIRHGAKLL-YAYSEAT 403 (527)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEEC-CBCCCHHHHH----------TTHHHHHHHHH-HHHHHCC
T ss_pred EcCcccCCCCCHHHHHHHHHHHHHHhh-cCCCeEEEecCC-CCcCchhhHH----------hHHHHHHHHHH-HHHhcCC
Confidence 44543 57999999999999988864 456666664222 2443332111 11223344555 5688899
Q ss_pred CcEEEEEcccccchhhHHhhh----cCEEEeeCCceEeCcccccCCCCCchhhchHhhhh-----CHHHHHH-HHH--cC
Q 004891 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MML--LS 166 (725)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala----cD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~v-----G~~~a~~-l~l--~g 166 (725)
.|+|+.|-|.|.|||+.-... +|+++|.+++.++ ++++-|.+..+-+.- -....++ +.- .-
T Consensus 404 vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 476 (527)
T 1vrg_A 404 VPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQ 476 (527)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999999887744433 8988887777665 444444444333321 1111111 221 11
Q ss_pred CCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 004891 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (725)
Q Consensus 167 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (725)
+.-++..+.+.|+||+|+++.++........+.+..+
T Consensus 477 ~~~~p~~~~~~g~iD~II~p~~tR~~l~~~L~~l~~~ 513 (527)
T 1vrg_A 477 QFANPYIAASRGYVDMVIDPRETRKYIMRALEVCETK 513 (527)
T ss_dssp HTSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred hhCCHHHHHHcCCCCeeeCHHHHHHHHHHHHHHHhcC
Confidence 2357788999999999999988777666666555443
No 385
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.45 E-value=0.018 Score=55.99 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=33.9
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
+||.|+|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 37999996 999999999999999999999999877543
No 386
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=95.43 E-value=0.21 Score=55.77 Aligned_cols=162 Identities=12% Similarity=-0.017 Sum_probs=92.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEE
Q 004891 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (725)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (725)
--++.+...+.+.++++.+.+. .+-+|.|.-.|+ +.+.+-..... . ...+...+ ..+ ..+.....|+|++
T Consensus 119 gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgG-----Arl~~qe~~~~-~-l~~~g~if-~~~-~~ls~~~iP~Isv 188 (588)
T 3gf3_A 119 AGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSG-----VEFPNQDKVYP-N-RRGGGTPF-FRN-SELNQLGIPVIVG 188 (588)
T ss_dssp GGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGHHHHSS-S-TTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCC-----cCccccccccc-c-hhhHHHHH-HHH-HHHhcCCCCEEEE
Confidence 4788888999999999988765 466777765443 33321111000 0 11122222 222 2355678999999
Q ss_pred EcccccchhhHHhhhcCEEEeeCCceEeCccccc--CCCCCchhhchHhhh---hCHHHHHHHHHcCCCCCHHHHH--Hc
Q 004891 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELTL--GVIPGFGGTQRLPRL---VGLSKAIEMMLLSKSITSEEGW--KL 177 (725)
Q Consensus 105 v~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~--Gl~p~~g~~~~l~r~---vG~~~a~~l~l~g~~~~a~eA~--~~ 177 (725)
|.|.|.|||...++++|++++.+++.+++....+ |+-|.+ . ..+.- +......+-..+.+.+...+.+ ..
T Consensus 189 v~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g--~-~~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~s 265 (588)
T 3gf3_A 189 IYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG--Y-IDDEAAEQIIAAQIENSKLKVPAPGSVPIHYDET 265 (588)
T ss_dssp ECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTS
T ss_pred EeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc--c-ccccchhhhhhhhccccccChhhccchhhhcccc
Confidence 9999999988778888988888999888753331 111100 0 01100 0011111111466667777766 59
Q ss_pred CCcceecCcchHHHHHHHHHHHHHh
Q 004891 178 GLIDAVVTSEELLKVSRLWALDIAA 202 (725)
Q Consensus 178 Glv~~vv~~~~l~~~a~~~a~~la~ 202 (725)
|++|.+++.++ .+.+.++++.+
T Consensus 266 Gv~d~~a~de~---~al~~~r~~ls 287 (588)
T 3gf3_A 266 GFFREVYQNDL---GVIDGIKKYIS 287 (588)
T ss_dssp CCSCEEESSHH---HHHHHHHHHHH
T ss_pred ccceEEeCCHH---HHHHHHHHHHH
Confidence 99999997653 34444444433
No 387
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.43 E-value=0.0078 Score=60.73 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=53.6
Q ss_pred ceEEEEcCC-CCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G-~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+++.|||.| .+|.++|..|.+.|..|+++++....++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 589999987 5899999999999999999986432221 34577
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++-..-++. ++++++++|++..+
T Consensus 194 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 223 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLNR-------EMVTPGSVVIDVGI 223 (276)
T ss_dssp SSEEEECSSCTTCBCG-------GGCCTTCEEEECCC
T ss_pred CCEEEECCCCCccccH-------hhccCCcEEEEecc
Confidence 9999999974322322 34688998886544
No 388
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=95.43 E-value=0.0097 Score=62.27 Aligned_cols=65 Identities=15% Similarity=0.192 Sum_probs=46.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-cc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~l 385 (725)
.||+|||+|.||..++..+.+. +.++ .++|++++. +. . . .+..+++++ .+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~------------~-gv~~~~d~~~ll 56 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------K------------T-PVFDVADVDKHA 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------S------------S-CEEEGGGGGGTT
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------c------------C-CCceeCCHHHHh
Confidence 5899999999999999999876 5664 588988643 10 0 0 123345553 34
Q ss_pred cCCCEEEEeccCChH
Q 004891 386 KDVDMVIEAVIESVP 400 (725)
Q Consensus 386 ~~aDlVIeavpe~~~ 400 (725)
.++|+||+|+|....
T Consensus 57 ~~~DvViiatp~~~h 71 (320)
T 1f06_A 57 DDVDVLFLCMGSATD 71 (320)
T ss_dssp TTCSEEEECSCTTTH
T ss_pred cCCCEEEEcCCcHHH
Confidence 789999999986554
No 389
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.39 E-value=0.039 Score=55.43 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCh
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (725)
.+|.|||+|.+|+.++..|++.|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 479999999999999999999998 789998763
No 390
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.38 E-value=0.049 Score=59.64 Aligned_cols=78 Identities=18% Similarity=0.201 Sum_probs=51.9
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc---
Q 004891 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL--- 380 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~iA~~l~~~-G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~--- 380 (725)
+...||+|||+|.||...+..+.+. |++| .++|+++++++...+.+. +.|. ......+
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~ 80 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGN 80 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSST
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCC
Confidence 3446899999999999999888874 6776 488999998776543211 1110 0122233
Q ss_pred -Cc-cccc--CCCEEEEeccCChH
Q 004891 381 -DY-SEFK--DVDMVIEAVIESVP 400 (725)
Q Consensus 381 -~~-~~l~--~aDlVIeavpe~~~ 400 (725)
++ +.++ ++|+|++|+|....
T Consensus 81 ~~~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 81 DDYKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp TTHHHHTTCTTCCEEEECCCGGGH
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHH
Confidence 55 3444 69999999996554
No 391
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.20 E-value=0.017 Score=59.00 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=53.9
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
++|.|||.|. +|..+|..|...|..|++++++...+. +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 208 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------------------------EEVNK 208 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------------------------HHhcc
Confidence 6899999995 799999999999999999985432211 35688
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++-.--++. +.++++++|++...
T Consensus 209 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 238 (301)
T 1a4i_A 209 GDILVVATGQPEMVKG-------EWIKPGAIVIDCGI 238 (301)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCcccCCH-------HHcCCCcEEEEccC
Confidence 9999999974322332 23678998886544
No 392
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.19 E-value=0.025 Score=59.31 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------cEEEEeCCh
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 341 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~-------~V~~~d~~~ 341 (725)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 48999997 9999999999999996 899999975
No 393
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.18 E-value=0.018 Score=61.37 Aligned_cols=97 Identities=11% Similarity=0.051 Sum_probs=58.5
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
+++.||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+ ..+.....+++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~ 57 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------------------RYPQASIVRSF 57 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------------------TCTTSEEESCS
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------------------hCCCCceECCH
Confidence 44568999999999997 66666665 77775 78999765211 01123445666
Q ss_pred -cccc--CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHHH
Q 004891 383 -SEFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (725)
Q Consensus 383 -~~l~--~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~l 431 (725)
+.++ ++|+|++|+|..... ++.....+. ...+++-..-+....+.
T Consensus 58 ~~ll~~~~vD~V~i~tp~~~H~--~~~~~al~a--GkhVl~EKP~a~~~~ea 105 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNTPDNTHY--EYAGMALEA--GKNVVVEKPFTSTTKQG 105 (362)
T ss_dssp HHHHTCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSCCSSHHHH
T ss_pred HHHhcCCCCCEEEEeCChHHHH--HHHHHHHHC--CCeEEEecCCCCCHHHH
Confidence 3344 499999999965553 333333221 22355544444554433
No 394
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=95.17 E-value=0.072 Score=56.02 Aligned_cols=109 Identities=12% Similarity=0.128 Sum_probs=60.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCC-CHHHH-HHhhcCcccccCc-
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY- 382 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~-~~~~~-~~~~~~i~~~~~~- 382 (725)
|.||||+|+|.+|..+++.+... +++|+ +.|.+++......+. +.....|.. ...+. .-.-+.+....+.
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-----dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~ 76 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-----KGYKLFVAIPDNERVKLFEDAGIPVEGTIL 76 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-----TTCCEEESSCCHHHHHHHHHTTCCCCCBGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-----cCCccccccCCCceeecccCCeEEECCchH
Confidence 35899999999999999999876 56765 456665554433210 000011221 11211 1111223333333
Q ss_pred ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCC
Q 004891 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (725)
Q Consensus 383 ~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~ 425 (725)
+.+.++|+|++|.|..... +... ..++..++.++++.+.
T Consensus 77 ~~~~~vDiV~eatg~~~s~--~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 77 DIIEDADIVVDGAPKKIGK--QNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp GTGGGCSEEEECCCTTHHH--HHHH--HTTTTTTCEEEECTTS
T ss_pred HhccCCCEEEECCCccccH--HHHH--HHHHHCCCEEEECCCc
Confidence 3457999999999854432 2211 3566777776665443
No 395
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.11 E-value=0.064 Score=58.60 Aligned_cols=74 Identities=14% Similarity=0.051 Sum_probs=51.0
Q ss_pred CcceEEEEcC----CCCcHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc
Q 004891 307 GVRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (725)
Q Consensus 307 ~~~kIaVIG~----G~mG~~iA~~l~~~--G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 379 (725)
...||+|||+ |.||...+..+.+. +++| .++|+++++++...+. -|. ..+...
T Consensus 19 ~~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g~----------~~~~~~ 78 (438)
T 3btv_A 19 APIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQR----------LKL----------SNATAF 78 (438)
T ss_dssp CCEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------TTC----------TTCEEE
T ss_pred CCCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cCC----------Ccceee
Confidence 3458999999 99999999999886 6776 5889999886654321 010 011234
Q ss_pred cCcc-cc--cCCCEEEEeccCChH
Q 004891 380 LDYS-EF--KDVDMVIEAVIESVP 400 (725)
Q Consensus 380 ~~~~-~l--~~aDlVIeavpe~~~ 400 (725)
++++ .+ .++|+|++|+|....
T Consensus 79 ~~~~~ll~~~~vD~V~i~tp~~~H 102 (438)
T 3btv_A 79 PTLESFASSSTIDMIVIAIQVASH 102 (438)
T ss_dssp SSHHHHHHCSSCSEEEECSCHHHH
T ss_pred CCHHHHhcCCCCCEEEEeCCcHHH
Confidence 5553 34 369999999995443
No 396
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=95.10 E-value=0.044 Score=58.81 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=59.8
Q ss_pred ceEEEEcCC-CCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-c
Q 004891 309 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-E 384 (725)
Q Consensus 309 ~kIaVIG~G-~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 384 (725)
.||+|||+| .||..++..+.+. +++|+ ++|+++++++...+.. .+...++++ .
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-----------------------GIPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-----------------------TCCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-----------------------CCCeECCHHHH
Confidence 589999999 9999999998875 56665 8899998876543211 123345553 3
Q ss_pred c--cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 385 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 385 l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
+ .++|+|++|+|..... ++.....+. ...+++-..-+....+
T Consensus 60 l~~~~vD~V~i~tp~~~H~--~~~~~al~a--Gk~Vl~EKP~a~~~~e 103 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFHC--EHVVQASEQ--GLHIIVEKPLTLSRDE 103 (387)
T ss_dssp HHHSCCSEEEECSCGGGHH--HHHHHHHHT--TCEEEECSCCCSCHHH
T ss_pred HcCCCCCEEEEcCCcHHHH--HHHHHHHHC--CCceeeeCCccCCHHH
Confidence 4 3699999999965543 333333221 1234544444455443
No 397
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=95.10 E-value=0.27 Score=54.69 Aligned_cols=161 Identities=14% Similarity=0.143 Sum_probs=97.7
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCC
Q 004891 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (725)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (725)
|+|.. -.++++-.....+.++.++.. .+-.|.|--. +.|..|.+-.+ .........++ ..+.+..
T Consensus 354 n~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~----------~Gi~~~ga~~l-~a~~~~~ 420 (548)
T 2bzr_A 354 NQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEY----------NGIIRRGAKLL-YAYGEAT 420 (548)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHH----------TTHHHHHHHHH-HHHHHCC
T ss_pred ECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHH----------hhHHHHHHHHH-HHHhCCC
Confidence 45543 589999999999988888653 5666666422 23544443221 11223344555 5688899
Q ss_pred CcEEEEEcccccchhhHHhh----hcCEEEeeCCceEeCcccccCCCCCchhhchHhhh-hCH------H--HHHH-HHH
Q 004891 99 KPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL------S--KAIE-MML 164 (725)
Q Consensus 99 kp~Iaav~G~a~GgG~~lal----acD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~-vG~------~--~a~~-l~l 164 (725)
.|+|+.|-|.|+|||..-.. .+|+++|.++++++. +++-|.+..+-+. +-. . ..++ +.-
T Consensus 421 VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~V-------mgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~ 493 (548)
T 2bzr_A 421 VPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAV-------MGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQQ 493 (548)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTCCC----------CHHHHHHHHH
T ss_pred CCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEEe-------cCHHHHHHHHhhhHHhhhhcccccHHHHHHHHHH
Confidence 99999999999998875543 389988888777653 3333433333322 110 0 1111 211
Q ss_pred --cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHH
Q 004891 165 --LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (725)
Q Consensus 165 --~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la 201 (725)
.-..-++..+.+.|+||.|+++.+.........+.+.
T Consensus 494 ~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~ 532 (548)
T 2bzr_A 494 EYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRLLE 532 (548)
T ss_dssp HHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHHTT
T ss_pred HHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHHHh
Confidence 0112355778999999999998877665555544443
No 398
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.08 E-value=0.0075 Score=59.93 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=34.4
Q ss_pred CCCcceEEEEcC-CCCcHHHHHHHHHCC-CcEEEEeCChHHH
Q 004891 305 PRGVRKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYL 344 (725)
Q Consensus 305 ~~~~~kIaVIG~-G~mG~~iA~~l~~~G-~~V~~~d~~~e~~ 344 (725)
++.|++|.|.|+ |.+|..++..|++.| ++|++++|+++.+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 456788999995 999999999999999 8999999998764
No 399
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.08 E-value=0.021 Score=57.97 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=56.6
Q ss_pred CCcceEEEEc-CCCCcHHHHHHHHHC-CCcEEE-EeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc
Q 004891 306 RGVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (725)
Q Consensus 306 ~~~~kIaVIG-~G~mG~~iA~~l~~~-G~~V~~-~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (725)
|++.||+|+| .|.||..++..+.+. +++++. +|++.+... . .+.+.+. .....+..++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~-G-----------~d~gel~-----g~~~gv~v~~dl 67 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQL-G-----------QDAGAFL-----GKQTGVALTDDI 67 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTT-T-----------SBTTTTT-----TCCCSCBCBCCH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccc-c-----------ccHHHHh-----CCCCCceecCCH
Confidence 3468999999 799999999988865 677765 688743210 0 0001000 000123344555
Q ss_pred -ccccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh
Q 004891 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (725)
Q Consensus 383 -~~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (725)
+.+.++|+||++.+ ++...+......+ .+.-+++.|++++.
T Consensus 68 ~~ll~~~DVVIDfT~--p~a~~~~~~~al~---~G~~vVigTTG~s~ 109 (272)
T 4f3y_A 68 ERVCAEADYLIDFTL--PEGTLVHLDAALR---HDVKLVIGTTGFSE 109 (272)
T ss_dssp HHHHHHCSEEEECSC--HHHHHHHHHHHHH---HTCEEEECCCCCCH
T ss_pred HHHhcCCCEEEEcCC--HHHHHHHHHHHHH---cCCCEEEECCCCCH
Confidence 34678999999886 4444444444333 33334444545443
No 400
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.07 E-value=0.011 Score=58.05 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.9
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 344 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~ 344 (725)
|+||.|+|+ |.+|+.++..|++.|++|++.+|+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999996 9999999999999999999999998753
No 401
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.00 E-value=0.039 Score=57.74 Aligned_cols=35 Identities=17% Similarity=0.132 Sum_probs=32.1
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHCCCcEEEEeCCh
Q 004891 307 GVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 307 ~~~kIaVIG~G~mG~~-iA~~l~~~G~~V~~~d~~~ 341 (725)
.++||.|||.|.+|.+ +|..|.+.|++|+++|.++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3689999999999996 9999999999999999875
No 402
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=94.99 E-value=0.035 Score=56.53 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=29.4
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHH-CCCcEE-EEeCChH
Q 004891 307 GVRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSE 342 (725)
Q Consensus 307 ~~~kIaVIG~-G~mG~~iA~~l~~-~G~~V~-~~d~~~e 342 (725)
...||+|+|+ |.||..++..+.+ .|++|+ ++|++++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~ 42 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGS 42 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCch
Confidence 3468999998 9999999998774 578877 7788764
No 403
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=94.98 E-value=0.13 Score=57.78 Aligned_cols=158 Identities=11% Similarity=0.124 Sum_probs=101.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEEE
Q 004891 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (725)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (725)
-.++++-.....+.++.++. .++-+|.|.-.+ .|..|.+-. ...+...+..++ .++..+..|+|+.|
T Consensus 385 G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDtp-Gf~~G~~~E----------~~Gi~~~gA~~~-~a~a~a~vP~itvI 451 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDTT-GIDVGNDAE----------KAELLGLGQSLI-YSIQTSHIPQFEIT 451 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHH-TTCCEEEEECCC-EECCSHHHH----------HTTHHHHHHHHH-HHHHTCCCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhc-CCCCeEEEecCC-CCCCcHHHH----------HHHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 47899999999999987664 466777775432 354444321 112334455666 67999999999999
Q ss_pred cccccchhhHHhhh-----c--CEEEeeCCceEeCcccccCCCCCchhhchHhhh-hCH---------HHH--HH-HHH-
Q 004891 106 EGLALGGGLELAMG-----C--HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL---------SKA--IE-MML- 164 (725)
Q Consensus 106 ~G~a~GgG~~lala-----c--D~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~-vG~---------~~a--~~-l~l- 164 (725)
-|.++|||. ++++ + |+++|.++++++ ++++-|.+..+-+. .-. ..+ ++ +.-
T Consensus 452 ~g~~~Ggg~-~am~~~~~~~~~d~~~a~p~A~~~-------Vm~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 523 (587)
T 1pix_A 452 LRKGTAAAH-YVLGGPQGNDTNAFSIGTAATEIA-------VMNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQA 523 (587)
T ss_dssp CSEEETTHH-HHTTCTTCTTTEEEEEECTTCEEE-------SSCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cCCCccHHH-HHhcCcccCcccceeeeccCCeEe-------cCCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHH
Confidence 999998885 4444 4 998888877776 33334443333222 110 000 11 100
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhcC
Q 004891 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (725)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (725)
--+..++..+.+.|+||.|+++.+.........+.+.+.+
T Consensus 524 y~~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 524 FYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp HHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred HHHhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence 0114788999999999999998887777666666665554
No 404
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=94.97 E-value=0.019 Score=59.49 Aligned_cols=91 Identities=18% Similarity=0.062 Sum_probs=58.4
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc-----c--c
Q 004891 309 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 380 (725)
Q Consensus 309 ~kIaVIG~G~m-G~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-----~--~ 380 (725)
++|.|||.|.| |..+|..|+..|..|+++||+..++.. +...-. . ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~--------------ra~~la----~--~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--------------RGESLK----L--NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--------------SCCCSS----C--CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh--------------HHHHHh----h--hcccccccccccHh
Confidence 68999999976 999999999999999999998432110 000000 0 00111 1 2
Q ss_pred Cc-ccccCCCEEEEeccCChH-HHHHHHHHHHHhCCCCeEEEecCCCC
Q 004891 381 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 426 (725)
Q Consensus 381 ~~-~~l~~aDlVIeavpe~~~-~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (725)
++ +.+++||+||.|++-.-- ++.+ .+++++++++..+..
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~e-------~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPTE-------YIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCTT-------TSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCHH-------HcCCCeEEEEcCCCc
Confidence 33 567899999999974322 2222 357888888766543
No 405
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.91 E-value=0.15 Score=52.25 Aligned_cols=95 Identities=16% Similarity=0.210 Sum_probs=63.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc-cCcccc--
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF-- 385 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~l-- 385 (725)
.+|..||+|..|.+........|.+|+.+|++++.++.+++.+++. |. .++++. .+...+
T Consensus 124 ~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l~d 186 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVIDG 186 (298)
T ss_dssp CEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGGGG
T ss_pred CEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhCCC
Confidence 6899999999765433322235889999999999999987654321 11 122221 111112
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEec
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (725)
...|+|+.+.. ..-+..+++++...++|+..++..
T Consensus 187 ~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 187 LEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp CCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 45799997654 445678899999999998776643
No 406
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=94.89 E-value=0.02 Score=58.12 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=53.7
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+++.|||.|. .|.++|..|...|..|++.++....++ +.+++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 6899999876 699999999999999999986532211 34678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++-.--++. +.++++++|++...
T Consensus 204 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLRS-------DMVKEGVIVVDVGI 233 (285)
T ss_dssp CSEEEECSSCTTCBCG-------GGSCTTEEEEECCC
T ss_pred CCEEEECCCCCCcCCH-------HHcCCCeEEEEecc
Confidence 9999999974322322 44688998876543
No 407
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.87 E-value=0.04 Score=56.56 Aligned_cols=41 Identities=20% Similarity=0.116 Sum_probs=36.4
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|+| +|-+|.+++..|++.|++|++++|++++++...+
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~ 161 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAAD 161 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHH
Confidence 5789999 8999999999999999999999999887766544
No 408
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.85 E-value=0.065 Score=57.72 Aligned_cols=76 Identities=18% Similarity=0.157 Sum_probs=51.3
Q ss_pred CCcceEEEEcCCC---CcHHHHHHHHHCC-CcEE--EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc
Q 004891 306 RGVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (725)
Q Consensus 306 ~~~~kIaVIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 379 (725)
|+.-||||||+|. ||...+..+...+ ++|+ ++|+++++++...++ -| + ......
T Consensus 10 m~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g-~---------~~~~~~ 69 (398)
T 3dty_A 10 PQPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQ----------LG-V---------DSERCY 69 (398)
T ss_dssp CSCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHH----------TT-C---------CGGGBC
T ss_pred cCcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH----------hC-C---------Ccceee
Confidence 3446899999999 9999988887765 6776 579999887664321 11 0 001334
Q ss_pred cCcc-ccc-------CCCEEEEeccCChHH
Q 004891 380 LDYS-EFK-------DVDMVIEAVIESVPL 401 (725)
Q Consensus 380 ~~~~-~l~-------~aDlVIeavpe~~~~ 401 (725)
++++ .++ +.|+|++|+|.....
T Consensus 70 ~~~~~ll~~~~~~~~~vD~V~i~tp~~~H~ 99 (398)
T 3dty_A 70 ADYLSMFEQEARRADGIQAVSIATPNGTHY 99 (398)
T ss_dssp SSHHHHHHHHTTCTTCCSEEEEESCGGGHH
T ss_pred CCHHHHHhcccccCCCCCEEEECCCcHHHH
Confidence 5553 333 499999999966553
No 409
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=94.82 E-value=0.19 Score=55.67 Aligned_cols=163 Identities=15% Similarity=0.093 Sum_probs=101.3
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCC
Q 004891 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (725)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (725)
|+|.. -.++++-.....+.++.++. .++-.|.|--. +.|..|.+-.+ .........++ ..+.+..
T Consensus 333 n~~~~~~G~~~~~~a~Kaar~i~~~~~-~~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~~A~~l-~a~a~~~ 399 (523)
T 1on3_A 333 NQPSVMSGCLDINASDKAAEFVNFCDS-FNIPLVQLVDV-PGFLPGVQQEY----------GGIIRHGAKML-YAYSEAT 399 (523)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEE-CCBCCCHHHHH----------TTHHHHHHHHH-HHHHHCC
T ss_pred ecCCccCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeC-CCcCcchHHHH----------hhHHHHHHHHH-HHHhcCC
Confidence 45543 57999999999999988764 45666666432 23544443211 12233444556 5688899
Q ss_pred CcEEEEEcccccchhhHHhhh----cCEEEeeCCceEeCcccccCCCCCchhhchHhhhh-----CHHHHHH-HHH--cC
Q 004891 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MML--LS 166 (725)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala----cD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~v-----G~~~a~~-l~l--~g 166 (725)
.|+|+.|-|.++|||+.-... +|+++|.+++.++ ++++-|.+..+-+.- -....++ +.- .-
T Consensus 400 vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 472 (523)
T 1on3_A 400 VPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQN 472 (523)
T ss_dssp SCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999999888755444 7887777766665 444444444443321 0111111 211 11
Q ss_pred CCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 004891 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (725)
Q Consensus 167 ~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (725)
..-++..+.+.|+||+|+++.++........+.+...
T Consensus 473 ~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~~~ 509 (523)
T 1on3_A 473 AFNTPYVAAARGQVDDVIDPADTRRKIASALEMYATK 509 (523)
T ss_dssp HHSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHGGGC
T ss_pred hhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHHHHhcC
Confidence 1256688999999999999988777666655555443
No 410
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=94.82 E-value=0.024 Score=61.49 Aligned_cols=95 Identities=15% Similarity=0.138 Sum_probs=59.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHC---------CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc
Q 004891 310 KVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 379 (725)
||||||+|.||...+..+.+. +.+|+ ++|++++++++..+++ +.....
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~----------------------~~~~~y 85 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL----------------------GAEKAY 85 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH----------------------TCSEEE
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc----------------------CCCeEE
Confidence 799999999999888888764 34554 7899999877654321 222345
Q ss_pred cCcc-cc--cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCChHH
Q 004891 380 LDYS-EF--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (725)
Q Consensus 380 ~~~~-~l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~~~ 430 (725)
+|++ .+ .+.|+|++|+|..... ++.....+. ..-+++-..-+....+
T Consensus 86 ~d~~~ll~~~~vD~V~I~tp~~~H~--~~~~~al~a--GkhVl~EKP~a~~~~e 135 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVDITSPNHLHY--TMAMAAIAA--GKHVYCEKPLAVNEQQ 135 (412)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESCSCSSHHH
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHc--CCCeEeecCCcCCHHH
Confidence 5663 33 4689999999966554 333332221 2235554444444443
No 411
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.80 E-value=0.073 Score=56.00 Aligned_cols=96 Identities=10% Similarity=0.005 Sum_probs=60.7
Q ss_pred cceEEEEcCC-CCcHHHHHHHHHC--CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 308 VRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 308 ~~kIaVIG~G-~mG~~iA~~l~~~--G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
..||+|||+| .||...+..+.+. +++| .++|+++++++...++ .+.....++++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM----------------------VGNPAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH----------------------HSSCEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHH----------------------hCCCcccCCHH
Confidence 3589999999 8999999999876 4665 5889999887664321 11123455663
Q ss_pred -cc--cCCCEEEEeccCChHHHHHHHHHHHHhCCCC-eEEEecCCCCChHH
Q 004891 384 -EF--KDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 430 (725)
Q Consensus 384 -~l--~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~-~ii~s~tS~~~~~~ 430 (725)
.+ .++|+|++|+|..... ++.....+ .+ .+++-..-+....+
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H~--~~~~~al~---aGkhVl~EKPla~~~~e 121 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELNL--PFIEKALR---KGVHVICEKPISTDVET 121 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGHH--HHHHHHHH---TTCEEEEESSSSSSHHH
T ss_pred HHhcCCCCCEEEEeCCchHHH--HHHHHHHH---CCCcEEEeCCCCCCHHH
Confidence 34 3699999999965542 33333322 23 35554433444443
No 412
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=94.77 E-value=0.32 Score=53.72 Aligned_cols=161 Identities=14% Similarity=0.122 Sum_probs=97.6
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCC
Q 004891 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (725)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (725)
|+|.. -.++++-.+...+.++.++.. ++-.|.|.-.+ .|..|.+-. ...+......++ .++.++.
T Consensus 345 n~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDtp-Gf~~G~~~E----------~~Gi~~~gAk~l-~a~a~a~ 411 (531)
T 3n6r_B 345 NQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDVP-GFLPGTSQE----------YGGVIKHGAKLL-YAYGEAT 411 (531)
T ss_dssp ECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-SBCCSHHHH----------HTTHHHHHHHHH-HHHHHCC
T ss_pred ecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCCC-CCCCCHHHH----------HhhHHHHHHHHH-HHHHhCC
Confidence 56643 589999999999988877653 56666664322 244443321 112234455666 6689999
Q ss_pred CcEEEEEcccccchhhHHhhh----cCEEEeeCCceEeCcccccCCCCCchhhchHhh-hhC---HHHHHHHHHcCCCCC
Q 004891 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPR-LVG---LSKAIEMMLLSKSIT 170 (725)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala----cD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r-~vG---~~~a~~l~l~g~~~~ 170 (725)
.|+|+.|-|.++|||..-... +|+++|.+++.++. +++-+.+..+-+ -+- ....+.--+.-+.-+
T Consensus 412 VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~V-------m~pegaa~Il~r~~~~~~~~~~~~~~~y~~~~~~ 484 (531)
T 3n6r_B 412 VPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAV-------MGAKGATEIIHRGDLGDPEKIAQHTADYEERFAN 484 (531)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHCCTTTTSTTHHHHHHHHHHHHHSS
T ss_pred CCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEec-------CCHHHHHHHHhcccccchhHHHHHHHHHHHHhcC
Confidence 999999999999988744433 89988887777653 333333332222 111 011110011112235
Q ss_pred HHHHHHcCCcceecCcchHHHHHHHHHHHHH
Q 004891 171 SEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (725)
Q Consensus 171 a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la 201 (725)
+..|.+.|+||.|+++.+.........+.+.
T Consensus 485 p~~aa~~~~vD~vIdP~~TR~~l~~~l~~~~ 515 (531)
T 3n6r_B 485 PFVASERGFVDEVIQPRSTRKRVARAFASLR 515 (531)
T ss_dssp SHHHHHHTSSSEECCGGGHHHHHHHHHHTTT
T ss_pred HHHHHhcCccCcccCHHHHHHHHHHHHHHHh
Confidence 5678889999999999887665555444433
No 413
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.74 E-value=0.022 Score=57.70 Aligned_cols=72 Identities=14% Similarity=0.084 Sum_probs=53.1
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+++.|||.|. +|.++|..|...|..|++.++....++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 6899999876 799999999999999999976432211 34678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++-.--++. +.++++++|++...
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (285)
T 3l07_A 205 ADILIVAVGKPNFITA-------DMVKEGAVVIDVGI 234 (285)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCcEEEEecc
Confidence 9999999974322322 34688988876543
No 414
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=94.72 E-value=0.014 Score=59.23 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=53.3
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
++|.|||.|. .|..+|..|...|..|+++++....+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 6899999996 699999999999999999986543322 34567
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++..--++. +.++++++|++...
T Consensus 203 ADIVI~Avg~p~lI~~-------~~vk~GavVIDVgi 232 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPG-------DWIKEGAIVIDVGI 232 (288)
T ss_dssp CSEEEECSCCTTCBCT-------TTSCTTCEEEECCC
T ss_pred CCEEEECCCCcCcCCH-------HHcCCCcEEEEccC
Confidence 9999999973322322 23578888876543
No 415
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=94.63 E-value=0.082 Score=60.24 Aligned_cols=81 Identities=11% Similarity=0.078 Sum_probs=56.1
Q ss_pred CCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCC--CHHHH
Q 004891 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--TSEEG 174 (725)
Q Consensus 97 ~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~--~a~eA 174 (725)
...|+|++|.|.|.|||..+...||++|+.+++.+.+. |+...+. .+|+.+ +.++.
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~iflt--------------------GP~vIk~--~tGeeV~~s~eeL 302 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILT--------------------GAPAINK--MLGREVYTSNLQL 302 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESS--------------------CHHHHHH--HHTSCCCSCTHHH
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEEe--------------------CHHHHHH--HhCCccccCchhc
Confidence 46799999999999999999999999999988644322 2222211 266665 54432
Q ss_pred ------HHcCCcceecCcchHHHHHHHHHHHHHh
Q 004891 175 ------WKLGLIDAVVTSEELLKVSRLWALDIAA 202 (725)
Q Consensus 175 ------~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (725)
...|++|.+++.|. .+.+.++++.+
T Consensus 303 GGA~vh~~sGvad~va~dd~---eal~~ir~lLs 333 (758)
T 3k8x_A 303 GGTQIMYNNGVSHLTAVDDL---AGVEKIVEWMS 333 (758)
T ss_dssp HSHHHHTTTTSSSEEESSHH---HHHHHHHHHHT
T ss_pred chhhHHHhcCCeeEEecCHH---HHHHHHHHHHh
Confidence 37999999997653 44445555443
No 416
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=94.63 E-value=0.58 Score=51.73 Aligned_cols=162 Identities=15% Similarity=0.215 Sum_probs=100.5
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCC
Q 004891 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (725)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (725)
|+|.. -.++++-.....+.++.++.. ++-+|.|.-.+ .|..|.+-. ...+......++ .++.+..
T Consensus 339 n~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~E----------~~gi~~~~Ak~l-~a~a~a~ 405 (530)
T 3iav_A 339 NQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQE----------HDGIIRRGAKLI-FAYAEAT 405 (530)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHH----------HTTHHHHHHHHH-HHHHHCC
T ss_pred ecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC-CCCccHHHH----------HhhHHHHHHHHH-HHHHhCC
Confidence 56654 589999999999999877754 56677764332 255554421 122334455666 6689999
Q ss_pred CcEEEEEcccccchhhHHhhh-----cCEEEeeCCceEeCcccccCCCCCchhhchHhhh-hC------HHHHHHHH--H
Q 004891 99 KPIVAAVEGLALGGGLELAMG-----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VG------LSKAIEMM--L 164 (725)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala-----cD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~-vG------~~~a~~l~--l 164 (725)
.|+|+.|-|.++|||. ++++ +|+++|.+++.++. +++-+.+..+-+. +- ...-.++. +
T Consensus 406 vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~V-------m~~egaa~il~r~~~~~~~~d~~~~~~~~~~~y 477 (530)
T 3iav_A 406 VPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAV-------MGAQGAVNILHRRTIADAGDDAEATRARLIQEY 477 (530)
T ss_dssp SCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSTTTSTTCTTCHHHHHHHHHHH
T ss_pred CCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEec-------CCHHHHHHHHhhhhhhhcccCHHHHHHHHHHHH
Confidence 9999999999998776 4444 79988888877663 3333333333221 11 00111111 1
Q ss_pred cCCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 004891 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (725)
Q Consensus 165 ~g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (725)
.-+.-++..|.+.|+||.|+++.+.........+.+..+
T Consensus 478 ~~~~~~p~~aa~~~~vD~VIdP~~TR~~l~~~l~~~~~k 516 (530)
T 3iav_A 478 EDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQLRTK 516 (530)
T ss_dssp HHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred HHhcCCHHHHHhcCCCCcccCHHHHHHHHHHHHHHHhcC
Confidence 111236777889999999999988776655555444443
No 417
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.56 E-value=0.03 Score=59.31 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=48.4
Q ss_pred cceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-
Q 004891 308 VRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 383 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~-iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 383 (725)
..||+|||+|.||.. .+..+.+. +++|+ ++|++++++++ . .......++++
T Consensus 7 ~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~~ 61 (352)
T 3kux_A 7 KIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------D------------WPAIPVVSDPQM 61 (352)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------T------------CSSCCEESCHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------h------------CCCCceECCHHH
Confidence 358999999999997 67777665 67765 88999876431 0 11234456663
Q ss_pred cc--cCCCEEEEeccCChHH
Q 004891 384 EF--KDVDMVIEAVIESVPL 401 (725)
Q Consensus 384 ~l--~~aDlVIeavpe~~~~ 401 (725)
.+ .+.|+|++|+|.....
T Consensus 62 ll~~~~vD~V~i~tp~~~H~ 81 (352)
T 3kux_A 62 LFNDPSIDLIVIPTPNDTHF 81 (352)
T ss_dssp HHHCSSCCEEEECSCTTTHH
T ss_pred HhcCCCCCEEEEeCChHHHH
Confidence 34 3599999999976654
No 418
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.47 E-value=0.03 Score=57.52 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (725)
+||.|.|+ |.+|+.++..|.+.||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999998 99999999999999999999999764
No 419
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.43 E-value=0.043 Score=59.61 Aligned_cols=98 Identities=15% Similarity=0.136 Sum_probs=59.2
Q ss_pred cceEEEEcCCC---CcHHHHHHHHHCC-CcEE--EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccC
Q 004891 308 VRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (725)
Q Consensus 308 ~~kIaVIG~G~---mG~~iA~~l~~~G-~~V~--~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (725)
..||||||+|. ||...+..+...+ ++|+ ++|+++++++...+++ |. ......++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g~----------~~~~~~~~ 96 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL----------GL----------DPSRVYSD 96 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH----------TC----------CGGGBCSC
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc----------CC----------CcccccCC
Confidence 35899999999 9999888887765 6765 6799999876653321 10 00123455
Q ss_pred c-cccc-------CCCEEEEeccCChHHHHHHHHHHHHhCCCCe-EEEecCCCCChHH
Q 004891 382 Y-SEFK-------DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (725)
Q Consensus 382 ~-~~l~-------~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~-ii~s~tS~~~~~~ 430 (725)
+ +.++ +.|+|++|+|..... ++.... +..+. +++-..-+....+
T Consensus 97 ~~~ll~~~~~~~~~vD~V~I~tp~~~H~--~~~~~a---l~aGkhVl~EKPla~~~~e 149 (417)
T 3v5n_A 97 FKEMAIREAKLKNGIEAVAIVTPNHVHY--AAAKEF---LKRGIHVICDKPLTSTLAD 149 (417)
T ss_dssp HHHHHHHHHHCTTCCSEEEECSCTTSHH--HHHHHH---HTTTCEEEEESSSCSSHHH
T ss_pred HHHHHhcccccCCCCcEEEECCCcHHHH--HHHHHH---HhCCCeEEEECCCcCCHHH
Confidence 5 3333 489999999976653 333332 23343 5554443444443
No 420
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.41 E-value=0.032 Score=57.25 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCh
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (725)
.||.|||+|-.|+.+|..|+++|. +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 899999875
No 421
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.40 E-value=0.027 Score=57.08 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=52.7
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccccC
Q 004891 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (725)
Q Consensus 309 ~kIaVIG~G~-mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l~~ 387 (725)
+++.|||.|. .|.++|..|...|..|++..+....++ +.+++
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 6899999865 899999999999999999876432211 34678
Q ss_pred CCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCC
Q 004891 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (725)
Q Consensus 388 aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS 424 (725)
||+||.+++-..-++. +.++++++|++..+
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVKG-------EWIKEGAIVIDVGI 234 (286)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCS
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCeEEEEecc
Confidence 9999999974322322 34688888876543
No 422
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.40 E-value=0.026 Score=57.03 Aligned_cols=71 Identities=23% Similarity=0.231 Sum_probs=52.7
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC--CCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcccc
Q 004891 309 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (725)
Q Consensus 309 ~kIaVIG~G~m-G~~iA~~l~~~--G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~l 385 (725)
+++.|||.|.| |..+|..|... |..|++.+++.+.+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 68999999976 99999999999 899999876542221 346
Q ss_pred cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecC
Q 004891 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (725)
Q Consensus 386 ~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (725)
++||+||.+++-.--++.+ .+++++++++..
T Consensus 202 ~~ADIVI~Avg~p~~I~~~-------~vk~GavVIDVg 232 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTAD-------MVRPGAAVIDVG 232 (281)
T ss_dssp TTCSEEEECSCCTTCBCGG-------GSCTTCEEEECC
T ss_pred hhCCEEEECCCCCcccCHH-------HcCCCcEEEEcc
Confidence 7899999999733223322 357888887644
No 423
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.39 E-value=0.031 Score=55.42 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=35.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
.++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 356777776 889999999999999999999999988776544
No 424
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.35 E-value=0.09 Score=58.10 Aligned_cols=74 Identities=20% Similarity=0.115 Sum_probs=51.0
Q ss_pred CcceEEEEcC----CCCcHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccc
Q 004891 307 GVRKVAVIGG----GLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (725)
Q Consensus 307 ~~~kIaVIG~----G~mG~~iA~~l~~~--G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~ 379 (725)
...||+|||+ |.||...+..|.+. +++|+ ++|+++++++...+. -|. ......
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~----------~g~----------~~~~~~ 97 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQ----------LQL----------KHATGF 97 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHH----------TTC----------TTCEEE
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cCC----------Ccceee
Confidence 3458999999 99999999999885 77764 889999887664321 010 011235
Q ss_pred cCc-ccc--cCCCEEEEeccCChH
Q 004891 380 LDY-SEF--KDVDMVIEAVIESVP 400 (725)
Q Consensus 380 ~~~-~~l--~~aDlVIeavpe~~~ 400 (725)
+++ +.+ .++|+|++|+|....
T Consensus 98 ~d~~ell~~~~vD~V~I~tp~~~H 121 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVKVPEH 121 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSCHHHH
T ss_pred CCHHHHhcCCCCCEEEEcCCcHHH
Confidence 555 334 379999999995443
No 425
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.32 E-value=0.009 Score=58.49 Aligned_cols=78 Identities=22% Similarity=0.229 Sum_probs=46.2
Q ss_pred ceEEEEcCCCCcHHHHHH--HHHCCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 309 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~--l~~~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
.+|+|||+|.+|..++.. +...|++++ ++|.+++...... .| . .+...+++ +.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i------------~g----------v-~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEV------------GG----------V-PVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEE------------TT----------E-EEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHh------------cC----------C-eeechhhHHHH
Confidence 479999999999999994 445688765 7799987633210 00 0 11123344 33
Q ss_pred ccCCCEEEEeccCChHHHHHHHHHHHH
Q 004891 385 FKDVDMVIEAVIESVPLKQKIFSELEK 411 (725)
Q Consensus 385 l~~aDlVIeavpe~~~~k~~v~~~l~~ 411 (725)
+++.|+||+|+| ....+++...+.+
T Consensus 143 i~~~D~ViIAvP--s~~~~ei~~~l~~ 167 (215)
T 2vt3_A 143 VKDESVAILTVP--AVAAQSITDRLVA 167 (215)
T ss_dssp CSSCCEEEECSC--HHHHHHHHHHHHH
T ss_pred HHhCCEEEEecC--chhHHHHHHHHHH
Confidence 444499999999 4444566666544
No 426
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.30 E-value=0.039 Score=58.81 Aligned_cols=68 Identities=15% Similarity=0.075 Sum_probs=48.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCc-cc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~--G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (725)
.||+|||+| +|.--+..+.+. +++++ ++|+++++.++..+. . .+...+++ +.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~----------------------~-gv~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA----------------------F-GIPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH----------------------T-TCCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH----------------------h-CCCEECCHHHH
Confidence 589999999 798877777664 57766 789999887664321 1 23445666 45
Q ss_pred ccCCCEEEEeccCChH
Q 004891 385 FKDVDMVIEAVIESVP 400 (725)
Q Consensus 385 l~~aDlVIeavpe~~~ 400 (725)
+++.|+|++|+|....
T Consensus 64 ~~~~D~v~i~~p~~~h 79 (372)
T 4gmf_A 64 TGMPDIACIVVRSTVA 79 (372)
T ss_dssp CSCCSEEEECCC--CT
T ss_pred hcCCCEEEEECCCccc
Confidence 6889999999986543
No 427
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.25 E-value=0.18 Score=52.46 Aligned_cols=40 Identities=18% Similarity=0.104 Sum_probs=35.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
.++|.|.|+ |.+|+.++..|++.|++|++.+++++..+..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 368999988 9999999999999999999999998775543
No 428
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=94.24 E-value=0.11 Score=57.55 Aligned_cols=38 Identities=24% Similarity=0.298 Sum_probs=32.4
Q ss_pred CCCcceEEEEcCCCCcHH-HHHHHHHCCCcEEEEeCChH
Q 004891 305 PRGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 342 (725)
Q Consensus 305 ~~~~~kIaVIG~G~mG~~-iA~~l~~~G~~V~~~d~~~e 342 (725)
+..++||.|||.|..|.+ +|..|.+.|++|+++|..+.
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 345789999999999996 99999999999999998754
No 429
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.22 E-value=0.037 Score=55.69 Aligned_cols=44 Identities=18% Similarity=0.300 Sum_probs=37.4
Q ss_pred ceEEEE--cCCCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHH
Q 004891 309 RKVAVI--GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352 (725)
Q Consensus 309 ~kIaVI--G~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~ 352 (725)
.|+++| |.+-+|.++|..|++.|.+|++.|++++.+++..+.+.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~ 54 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT 54 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 478888 55889999999999999999999999998887765443
No 430
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.22 E-value=0.049 Score=56.00 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999997 9999999999999999999999986
No 431
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.21 E-value=0.033 Score=54.34 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.1
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCChHHH
Q 004891 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYL 344 (725)
Q Consensus 310 kIaVIG-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~ 344 (725)
||.|+| .|.+|..++..|++.|++|++.+|+++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 799998 59999999999999999999999998653
No 432
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.20 E-value=0.06 Score=55.78 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 568999996 9999999999999999999999986
No 433
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=94.18 E-value=0.037 Score=55.71 Aligned_cols=43 Identities=28% Similarity=0.397 Sum_probs=36.0
Q ss_pred ceEEEE-cC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVI-G~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
.|+++| |+ +-||.++|..|++.|.+|+++|++++.+++..+.+
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 367766 44 77999999999999999999999999988776544
No 434
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=94.07 E-value=0.043 Score=58.67 Aligned_cols=70 Identities=23% Similarity=0.250 Sum_probs=45.4
Q ss_pred eEEEEcCCCCcHHHHHHHHH--------CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 310 KVAVIGGGLMGSGIATAHIL--------NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~--------~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
||||||+|.||..-+..+.. .+.+|+ ++|++++++++..++ .+.-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~g~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----------------------FGFEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----------------------hCCCeecC
Confidence 79999999999876655533 245654 789999887765432 12223456
Q ss_pred Cccc-c--cCCCEEEEeccCChHH
Q 004891 381 DYSE-F--KDVDMVIEAVIESVPL 401 (725)
Q Consensus 381 ~~~~-l--~~aDlVIeavpe~~~~ 401 (725)
|++. + .+.|+|++|+|.....
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 6633 3 4689999999966654
No 435
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.04 E-value=0.074 Score=55.21 Aligned_cols=36 Identities=19% Similarity=0.364 Sum_probs=28.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHH--CCCcE-EEEeCChHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHIL--NNIYV-VLKEVNSEY 343 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~--~G~~V-~~~d~~~e~ 343 (725)
..||+|||+|.||..++..+.+ .+.++ .++|+++++
T Consensus 4 ~irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 4 KLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CCEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 3589999999999999999865 35554 578998776
No 436
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=94.00 E-value=0.12 Score=54.22 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=28.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLL 345 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~ 345 (725)
.||||+|+|.||..+++.+.+. +++|+ +.|++++...
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~ 40 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA 40 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHH
Confidence 5899999999999999999874 56664 4577755443
No 437
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=93.92 E-value=0.088 Score=51.88 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=36.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
+++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 46 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL 46 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356777776 78999999999999999999999998877765433
No 438
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=93.92 E-value=0.046 Score=56.67 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (725)
++|.|+|+ |.+|+.++..|++.|++|++.+|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999996 99999999999999999999999875
No 439
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=93.89 E-value=0.042 Score=57.98 Aligned_cols=70 Identities=13% Similarity=0.046 Sum_probs=45.7
Q ss_pred ceEEEEcCCCCcHHHHHH-H-HH-CCCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc-
Q 004891 309 RKVAVIGGGLMGSGIATA-H-IL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS- 383 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~-l-~~-~G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~- 383 (725)
.||+|||+|.||..+... + .. .+++|+ ++|+++++.+... + ...+...++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~-----------~------------~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAP-----------I------------YSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSG-----------G------------GTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHH-----------h------------cCCCceECCHHH
Confidence 589999999999875433 3 32 377777 8899987642210 0 11234456663
Q ss_pred ccc--CCCEEEEeccCChHH
Q 004891 384 EFK--DVDMVIEAVIESVPL 401 (725)
Q Consensus 384 ~l~--~aDlVIeavpe~~~~ 401 (725)
.+. ++|+|++|+|.....
T Consensus 60 ll~~~~~D~V~i~tp~~~h~ 79 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSHF 79 (345)
T ss_dssp HHTCTTEEEEEECSCGGGHH
T ss_pred HhcCCCCCEEEEcCChHHHH
Confidence 344 489999999966553
No 440
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=93.86 E-value=0.1 Score=46.00 Aligned_cols=81 Identities=9% Similarity=-0.008 Sum_probs=58.2
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCcccccCcc
Q 004891 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (725)
Q Consensus 308 ~~kIaVIG~----G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (725)
.++|+|||+ +..|..+...|.+.||+|+.++...+.+ ....+..+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 478999998 5679999999999999999988764321 1234455666
Q ss_pred cccCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEE
Q 004891 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~ 420 (725)
++.+.|+++.++| .+...++++++.+. ....++.
T Consensus 55 dlp~vDlavi~~p--~~~v~~~v~e~~~~-g~k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYIN--PQNQLSEYNYILSL-KPKRVIF 88 (122)
T ss_dssp CCTTCCEEEECSC--HHHHGGGHHHHHHH-CCSEEEE
T ss_pred HCCCCCEEEEEeC--HHHHHHHHHHHHhc-CCCEEEE
Confidence 6655999999998 66666777776554 2234543
No 441
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.86 E-value=0.077 Score=55.57 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=60.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHC-CCcEEEEeCCh---HHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc--
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL-- 380 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~-G~~V~~~d~~~---e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-- 380 (725)
|.||+|+|+ |.+|..+...|.+. .+++..+..+. ..-+.. ......+ .+. ..+.+..
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~----~~~~p~~--~~~----------~~~~v~~~~ 67 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI----SDLHPQL--KGI----------VELPLQPMS 67 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH----HHHCGGG--TTT----------CCCBEEEES
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch----HHhCccc--cCc----------cceeEeccC
Confidence 579999995 99999999999884 56777665433 211111 0000000 010 0122222
Q ss_pred Ccccc-cCCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCCCh
Q 004891 381 DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (725)
Q Consensus 381 ~~~~l-~~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~~~ 428 (725)
+.+.+ +++|+||+|+| .....++..++. ..++.++++++...+
T Consensus 68 ~~~~~~~~~Dvvf~a~p--~~~s~~~~~~~~---~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 68 DISEFSPGVDVVFLATA--HEVSHDLAPQFL---EAGCVVFDLSGAFRV 111 (337)
T ss_dssp SGGGTCTTCSEEEECSC--HHHHHHHHHHHH---HTTCEEEECSSTTSS
T ss_pred CHHHHhcCCCEEEECCC--hHHHHHHHHHHH---HCCCEEEEcCCcccc
Confidence 34455 89999999999 444455555543 467888898887644
No 442
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.84 E-value=0.1 Score=54.84 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=31.4
Q ss_pred CCcceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 306 RGVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 306 ~~~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
|..++|.|+|+ |.+|+.++..|++.|++|++++|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34568999998 9999999999999999999999976
No 443
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.82 E-value=0.044 Score=57.58 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (725)
.++|.|.|+ |.+|+.++..|++.|++|++++++..
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 468999996 99999999999999999999999654
No 444
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.70 E-value=0.071 Score=54.77 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 578999997 9999999999999999999999974
No 445
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.59 E-value=0.22 Score=54.53 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (725)
.+||.|||.|..|.+.|..|.+.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 47999999999999999999999999999999653
No 446
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=93.49 E-value=0.93 Score=50.29 Aligned_cols=158 Identities=16% Similarity=0.111 Sum_probs=94.7
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCCcCCCCchhhhhccCCCcccccchhHHHHHHHHHhhCCCcEEEEE
Q 004891 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (725)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~~~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (725)
-.++++..+...+.++.++.. ++-+|.|.-.++ |..|.+-. ...+......++ .++.++..|+|+.|
T Consensus 366 G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtpG-f~~G~~~E----------~~Gi~~~gAk~~-~a~~~a~vP~itvi 432 (555)
T 3u9r_B 366 GILFAEAAQKGAHFIELACQR-GIPLLFLQNITG-FMVGQKYE----------AGGIAKHGAKLV-TAVACARVPKFTVL 432 (555)
T ss_dssp SSBCHHHHHHHHHHHHHHHHH-TCCEEEEEEECC-BCCSHHHH----------HTTHHHHHHHHH-HHHHHCCSCEEEEE
T ss_pred CccCHHHHHHHHHHHHHHhcC-CCCEEEEecCcC-CCCCHHHH----------HHHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 578899988888888877653 566777754332 44443321 112233455666 66899999999999
Q ss_pred cccccchhhHHhh----hcCEEEeeCCceEeCcccccCCCCCchhhchHh---hh-h-------CH--HHHH-HHHH--c
Q 004891 106 EGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP---RL-V-------GL--SKAI-EMML--L 165 (725)
Q Consensus 106 ~G~a~GgG~~lal----acD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~---r~-v-------G~--~~a~-~l~l--~ 165 (725)
-|.++|||..-+. .+|+++|.+++.++. +.+-+.+..|- +. + .. ..+. +.+. -
T Consensus 433 ~g~~~Ggg~~am~~~~~~~d~~~a~p~A~i~V-------mgpegaa~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~y 505 (555)
T 3u9r_B 433 IGGSFGAGNYGMCGRAYDPRFLWMWPNARIGV-------MGGEQAAGVLAQVKREQAERAGQQLGVEEEAKIKAPILEQY 505 (555)
T ss_dssp EEEEETTHHHHTTCGGGCCSEEEECTTCEEES-------SCHHHHHHHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred eCCccchhhHhhcCccCCCCeEEEcCCcEEEc-------CCHHHHHHHHHHHHHHHHHhccCCCCcchHHHHHHHHHHHH
Confidence 9998888653332 379999887777763 33333333322 10 0 00 0000 0000 0
Q ss_pred CCCCCHHHHHHcCCcceecCcchHHHHHHHHHHHHHhc
Q 004891 166 SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (725)
Q Consensus 166 g~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (725)
-+..++-.|.+.|+||.|+++.+.........+.+.++
T Consensus 506 ~~~~~p~~aa~r~~vD~vIdP~~TR~~l~~~l~~~~~~ 543 (555)
T 3u9r_B 506 EHQGHPYYSSARLWDDGVIDPAQTREVLALALSAALNA 543 (555)
T ss_dssp HHHHSHHHHHHTTSSSCBCCGGGHHHHHHHHHHHHTTS
T ss_pred HHhCCHHHHhhccccCcccChHHHHHHHHHHHHHHhcC
Confidence 11236667778899999999888766655555444443
No 447
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=93.48 E-value=0.094 Score=52.65 Aligned_cols=41 Identities=22% Similarity=0.148 Sum_probs=34.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAAS 49 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45667766 899999999999999999999999987766543
No 448
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=93.47 E-value=0.033 Score=55.03 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
.|+|||+|.-|.+.|..|+++|++|+++|.++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999864
No 449
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.46 E-value=0.055 Score=53.94 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=34.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 52 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA 52 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56777776 89999999999999999999999988766543
No 450
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.46 E-value=0.1 Score=52.40 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=35.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARS 50 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 45667766 8999999999999999999999999877665443
No 451
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.46 E-value=0.1 Score=54.67 Aligned_cols=86 Identities=14% Similarity=0.201 Sum_probs=49.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCChHHHHHHHHHHHHHHHhhHHcCCCCHH--HHHHhhcCcccccCc-c
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD--KANNALKMLKGVLDY-S 383 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V~-~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~--~~~~~~~~i~~~~~~-~ 383 (725)
.||||+|+|.||..++..+.+. +.+|+ +.|++++.+....+... ....+.+... .... +.+....++ +
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~g-----~~~~~~~~~~v~~~~~--~~~~v~~d~~~ 75 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELG-----IPVYAASEEFIPRFEK--EGFEVAGTLND 75 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTT-----CCEEESSGGGHHHHHH--HTCCCSCBHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhcC-----ccccccccccceeccC--CceEEcCcHHH
Confidence 5899999999999999999876 45654 66887766554332100 0000000000 0000 112333444 3
Q ss_pred cccCCCEEEEeccCChHH
Q 004891 384 EFKDVDMVIEAVIESVPL 401 (725)
Q Consensus 384 ~l~~aDlVIeavpe~~~~ 401 (725)
.+.++|+|++|.|.....
T Consensus 76 l~~~vDvV~~aTp~~~h~ 93 (334)
T 2czc_A 76 LLEKVDIIVDATPGGIGA 93 (334)
T ss_dssp HHTTCSEEEECCSTTHHH
T ss_pred hccCCCEEEECCCccccH
Confidence 346899999999966543
No 452
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=93.45 E-value=0.1 Score=52.10 Aligned_cols=43 Identities=26% Similarity=0.196 Sum_probs=35.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 56 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHI 56 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45666666 78999999999999999999999998877765443
No 453
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.44 E-value=0.21 Score=49.84 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=31.6
Q ss_pred cceEEEE-c-CCCCcHHHHHHHHHCCCcEEEEeCChHHHHH
Q 004891 308 VRKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (725)
Q Consensus 308 ~~kIaVI-G-~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~ 346 (725)
|+|+.|| | .+-+|.++|..|++.|++|++.|++++.++.
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~ 41 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD 41 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3455555 5 4789999999999999999999999887654
No 454
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.089 Score=53.67 Aligned_cols=42 Identities=29% Similarity=0.286 Sum_probs=34.2
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 310 kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
+|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 77 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI 77 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 4445565 88999999999999999999999998877665433
No 455
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=93.34 E-value=0.068 Score=54.08 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=35.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
++|.|.|+ |-+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 48 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEI 48 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 34555565 78999999999999999999999998877765443
No 456
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=93.34 E-value=0.056 Score=56.37 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=30.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcE-EEEeCChHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 343 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V-~~~d~~~e~ 343 (725)
|.||||||+ |.||...+..+.+.|.++ .++|++++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV 40 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 579999999 799999999999888865 478998764
No 457
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=93.23 E-value=0.045 Score=53.96 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=33.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++..
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 45 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL 45 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 45667765 8999999999999999999999998876554
No 458
>2x24_A Acetyl-COA carboxylase; fatty acid biosynthesis, ligase, lipid synthesis; HET: X24; 2.40A {Bos taurus} PDB: 3ff6_A* 3tdc_A*
Probab=93.21 E-value=0.22 Score=57.30 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=50.6
Q ss_pred CCCcEEEEEcccccchhhHHhhhcCEEEeeCCceEeCcccccCCCCCchhhchHhhhhCHHHHHHHHHcCCCC--C----
Q 004891 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--T---- 170 (725)
Q Consensus 97 ~~kp~Iaav~G~a~GgG~~lalacD~~ia~~~a~~~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~~l~l~g~~~--~---- 170 (725)
...|+|++|.|.|.|||..++..||++|+.+++.+.+. |+... +. .+|+.+ +
T Consensus 258 ~~iP~IsvV~G~~~GGgAy~~~lgD~vI~~~~a~i~lt--------------------Gp~vi-~~-~~Ge~vy~s~e~L 315 (793)
T 2x24_A 258 DEIVTISMVSCRALGIGAYLVRLGQRVIQVENSHIILT--------------------GATAL-NK-VLGRDVYTSNNQL 315 (793)
T ss_dssp HHSCEEEEECSEEETHHHHHHHHTCCEEEETTCEEESS--------------------CHHHH-HH-HHSSCCCSCHHHH
T ss_pred CCCCEEEEEecCCchHHHHHHhhCCeEEEeccccEEec--------------------CHHHH-HH-hcCCcccCChhhh
Confidence 46999999999999999999999999999998766542 22211 11 345554 3
Q ss_pred --HHHHHHcCCcceecCcc
Q 004891 171 --SEEGWKLGLIDAVVTSE 187 (725)
Q Consensus 171 --a~eA~~~Glv~~vv~~~ 187 (725)
++-....|++|.+++.+
T Consensus 316 GGa~v~~~~Gv~d~vv~dd 334 (793)
T 2x24_A 316 GGVQIMHHNGVSHVTVPDD 334 (793)
T ss_dssp HSHHHHTTTTSCSEEESSH
T ss_pred ccHHHHHhcCceEEEeCCH
Confidence 22256799999999764
No 459
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.20 E-value=0.098 Score=53.83 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 568999996 9999999999999999999999983
No 460
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=93.20 E-value=0.13 Score=54.02 Aligned_cols=35 Identities=20% Similarity=0.288 Sum_probs=32.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~ 343 (725)
++|+|+|.|.+|...|..+...|.+|+++|+++++
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~ 210 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTER 210 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccH
Confidence 68999999999999999999999999999999764
No 461
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=93.19 E-value=0.096 Score=54.89 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=24.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEEEEe
Q 004891 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLKE 338 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~-G~~V~~~d 338 (725)
.||||+|+|.||..+++.+.+. +++|+.++
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI~ 34 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAVN 34 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEEE
Confidence 5899999999999999999876 56766543
No 462
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=93.12 E-value=0.064 Score=57.39 Aligned_cols=73 Identities=16% Similarity=0.129 Sum_probs=48.4
Q ss_pred CcceEEEEc-CCCCcHH-HH----HHHHHCC-CcE----------EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHH
Q 004891 307 GVRKVAVIG-GGLMGSG-IA----TAHILNN-IYV----------VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKA 369 (725)
Q Consensus 307 ~~~kIaVIG-~G~mG~~-iA----~~l~~~G-~~V----------~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~ 369 (725)
+..||+||| +|.||.. .+ ..+.+.+ ..+ .++|+++++++...+.
T Consensus 5 ~~irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a~~~a~~------------------- 65 (383)
T 3oqb_A 5 QRLGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKVEALAKR------------------- 65 (383)
T ss_dssp EEEEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHHHHHHHH-------------------
T ss_pred ceeEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHHHHHHHH-------------------
Confidence 345899999 9999998 66 6666544 232 4999999987664321
Q ss_pred HHhhcCcccccCcc-cc--cCCCEEEEeccCChHH
Q 004891 370 NNALKMLKGVLDYS-EF--KDVDMVIEAVIESVPL 401 (725)
Q Consensus 370 ~~~~~~i~~~~~~~-~l--~~aDlVIeavpe~~~~ 401 (725)
.+.-...++++ .+ .+.|+|++|+|.....
T Consensus 66 ---~~~~~~~~~~~~ll~~~~iD~V~i~tp~~~h~ 97 (383)
T 3oqb_A 66 ---FNIARWTTDLDAALADKNDTMFFDAATTQARP 97 (383)
T ss_dssp ---TTCCCEESCHHHHHHCSSCCEEEECSCSSSSH
T ss_pred ---hCCCcccCCHHHHhcCCCCCEEEECCCchHHH
Confidence 11112345653 33 4589999999966553
No 463
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.10 E-value=0.16 Score=52.77 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=30.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcE-EEEeCChHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 343 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V-~~~d~~~e~ 343 (725)
|.||||||+ |.||...+..+.+.+.+| .++|++++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV 40 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 579999999 789999999999988865 478998775
No 464
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=93.08 E-value=0.11 Score=51.81 Aligned_cols=39 Identities=23% Similarity=0.151 Sum_probs=32.6
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 310 kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
+|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 41 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELK 41 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4555565 89999999999999999999999988766544
No 465
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.06 E-value=0.039 Score=59.06 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e 342 (725)
.||.|||+|.-|...|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 4899999999999999999999999999998653
No 466
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=93.06 E-value=0.066 Score=53.83 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=34.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA 50 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45667776 899999999999999999999999988766543
No 467
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.04 E-value=0.083 Score=55.22 Aligned_cols=64 Identities=19% Similarity=0.149 Sum_probs=44.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC---------CCcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccc
Q 004891 309 RKVAVIGGGLMGSGIATAHILN---------NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~---------G~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 378 (725)
.||+|||+|.||+.++..+.+. +.+| .++|++.++. ++ +. ....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~----------------~~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKP----------------RA-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSC----------------CS-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHh----------------hc-cC---------cccc
Confidence 5899999999999999998876 3455 4678875431 11 11 1123
Q ss_pred ccCcc-cccCCCEEEEeccCCh
Q 004891 379 VLDYS-EFKDVDMVIEAVIESV 399 (725)
Q Consensus 379 ~~~~~-~l~~aDlVIeavpe~~ 399 (725)
++|++ .+ +.|+|++|+|...
T Consensus 58 ~~d~~~ll-~iDvVve~t~~~~ 78 (332)
T 2ejw_A 58 RAEPFDLL-EADLVVEAMGGVE 78 (332)
T ss_dssp ESSCCCCT-TCSEEEECCCCSH
T ss_pred cCCHHHHh-CCCEEEECCCCcH
Confidence 55664 45 9999999998553
No 468
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.02 E-value=0.13 Score=51.88 Aligned_cols=41 Identities=29% Similarity=0.264 Sum_probs=34.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 63 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQ 63 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45666665 899999999999999999999999887766544
No 469
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=92.97 E-value=0.23 Score=49.50 Aligned_cols=31 Identities=19% Similarity=0.385 Sum_probs=26.2
Q ss_pred eEEEEcC-CCCcHHHHHHHHHC-CCcEE-EEeCC
Q 004891 310 KVAVIGG-GLMGSGIATAHILN-NIYVV-LKEVN 340 (725)
Q Consensus 310 kIaVIG~-G~mG~~iA~~l~~~-G~~V~-~~d~~ 340 (725)
||+|+|+ |.||..++..+.+. |++|+ ++|++
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~ 35 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG 35 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC
Confidence 7999997 99999999998865 89887 56654
No 470
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.95 E-value=0.072 Score=53.70 Aligned_cols=41 Identities=27% Similarity=0.318 Sum_probs=33.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|-|.|+ |-+|.++|..|++.|++|++.+++++.++...+
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 52 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVA 52 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34445554 889999999999999999999999988776544
No 471
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=92.93 E-value=0.041 Score=57.52 Aligned_cols=36 Identities=28% Similarity=0.459 Sum_probs=28.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC---------CCcEE-EEeCChHH
Q 004891 308 VRKVAVIGGGLMGSGIATAHILN---------NIYVV-LKEVNSEY 343 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~---------G~~V~-~~d~~~e~ 343 (725)
|.||+|||+|.||+.++..+.+. +.+|+ ++|++++.
T Consensus 2 mirvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~ 47 (327)
T 3do5_A 2 MIKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSI 47 (327)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEE
T ss_pred cEEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHh
Confidence 46899999999999999999875 45554 66777543
No 472
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=92.92 E-value=0.13 Score=53.62 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=36.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l 52 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46777776 89999999999999999999999999887765443
No 473
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=92.91 E-value=0.11 Score=52.82 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=33.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~ 63 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG 63 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 44555565 899999999999999999999999887765543
No 474
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=92.89 E-value=0.085 Score=52.86 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=34.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVAS 44 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35666665 889999999999999999999999887665543
No 475
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.89 E-value=0.078 Score=52.82 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=33.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 45 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA 45 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 46777776 8899999999999999999999998876554
No 476
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=92.86 E-value=0.064 Score=57.23 Aligned_cols=70 Identities=19% Similarity=0.141 Sum_probs=48.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCC--------CcE-EEEeCChHHHHHHHHHHHHHHHhhHHcCCCCHHHHHHhhcCccccc
Q 004891 310 KVAVIGGGLMGSGIATAHILNN--------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (725)
Q Consensus 310 kIaVIG~G~mG~~iA~~l~~~G--------~~V-~~~d~~~e~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (725)
||||||+|.||..-+..+.+.. .+| .++|+++++++...++ ++.-...+
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~----------------------~g~~~~~~ 65 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGK----------------------LGWSTTET 65 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHH----------------------HTCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHH----------------------cCCCcccC
Confidence 7999999999998887776532 244 4789999987765432 12223456
Q ss_pred Ccc-cc--cCCCEEEEeccCChHH
Q 004891 381 DYS-EF--KDVDMVIEAVIESVPL 401 (725)
Q Consensus 381 ~~~-~l--~~aDlVIeavpe~~~~ 401 (725)
|++ .+ .+.|+|++|+|.....
T Consensus 66 d~~~ll~~~~iDaV~I~tP~~~H~ 89 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTPGDSHA 89 (390)
T ss_dssp CHHHHTTCTTCSEEEECSCGGGHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHH
Confidence 663 34 4689999999966654
No 477
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=92.77 E-value=0.11 Score=51.82 Aligned_cols=43 Identities=28% Similarity=0.274 Sum_probs=36.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~ 53 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQI 53 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 56667776 88999999999999999999999998877765443
No 478
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=92.73 E-value=0.059 Score=54.32 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=31.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~ 345 (725)
++|.|.|+ |-+|..+|..|++.|++|++.+++++.+.
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV 65 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 45556665 88999999999999999999999987653
No 479
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=92.70 E-value=0.13 Score=50.85 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=34.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..++..|++.|++|++.+++++.++...+
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE 49 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence 45666665 899999999999999999999999887665443
No 480
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.69 E-value=0.068 Score=56.51 Aligned_cols=34 Identities=21% Similarity=0.284 Sum_probs=31.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCh
Q 004891 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (725)
Q Consensus 308 ~~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~ 341 (725)
...|.|||+|.+|.++|..|++.|++|+++|...
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3579999999999999999999999999999763
No 481
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.69 E-value=0.093 Score=55.01 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=33.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCChHHHH
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~~V~~~d~~~e~~~ 345 (725)
++|.|+|.|..|..++..|.+.|+ |+++|+|++.++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 579999999999999999999999 999999999876
No 482
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.68 E-value=0.096 Score=58.49 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=32.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~ 343 (725)
++||.|.|+ |.+|+.++..|++.|++|+++++++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 468999995 999999999999999999999998754
No 483
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.67 E-value=0.11 Score=52.44 Aligned_cols=40 Identities=20% Similarity=0.101 Sum_probs=34.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~ 72 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETA 72 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHH
Confidence 56778876 89999999999999999999999988766544
No 484
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.65 E-value=0.12 Score=52.07 Aligned_cols=42 Identities=21% Similarity=0.177 Sum_probs=35.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (725)
+++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 54 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQ 54 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH
Confidence 45666666 7899999999999999999999999887766543
No 485
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=92.65 E-value=0.1 Score=52.19 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=34.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 54 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAV 54 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56777776 89999999999999999999999988766544
No 486
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.62 E-value=0.084 Score=55.88 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=30.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN 340 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~ 340 (725)
.||.|+|+|.+|.++|..+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 689999999999999999999998 89999998
No 487
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.62 E-value=0.099 Score=52.98 Aligned_cols=41 Identities=17% Similarity=0.080 Sum_probs=34.0
Q ss_pred eEEEE-cC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHH
Q 004891 310 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (725)
Q Consensus 310 kIaVI-G~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (725)
|+++| |+ |-+|..+|..|++.|++|++.+++++.++...+.
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 71 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAA 71 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 55555 54 8899999999999999999999999887765543
No 488
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=92.62 E-value=0.095 Score=52.41 Aligned_cols=43 Identities=23% Similarity=0.174 Sum_probs=35.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
+++-|.|+ |-+|.++|..|++.|++|++.+++++.++...+.+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI 51 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 34556666 88999999999999999999999999887765543
No 489
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=92.59 E-value=0.075 Score=53.51 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=33.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~ 347 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM 47 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45777776 8999999999999999999999998876554
No 490
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.58 E-value=0.098 Score=53.12 Aligned_cols=40 Identities=23% Similarity=0.204 Sum_probs=34.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 73 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA 73 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH
Confidence 46777766 89999999999999999999999988766544
No 491
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=92.57 E-value=0.11 Score=52.51 Aligned_cols=41 Identities=27% Similarity=0.269 Sum_probs=34.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKA 55 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45666665 899999999999999999999999987766543
No 492
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=92.57 E-value=0.081 Score=52.82 Aligned_cols=40 Identities=15% Similarity=0.015 Sum_probs=32.9
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~ 348 (725)
+++-|.|+ |-+|..+|..|++.|++|++.+++++.++...
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~ 50 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAIS 50 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 34445555 88999999999999999999999998876654
No 493
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.56 E-value=0.1 Score=52.02 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=34.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
+++.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGD 49 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 45667766 899999999999999999999999887766543
No 494
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.56 E-value=0.14 Score=51.67 Aligned_cols=43 Identities=16% Similarity=0.146 Sum_probs=35.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~i 351 (725)
+++-|.|+ |-+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 52 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESAL 52 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45666665 88999999999999999999999998877765544
No 495
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=92.49 E-value=0.15 Score=53.91 Aligned_cols=101 Identities=19% Similarity=0.148 Sum_probs=56.3
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHHHHHHhhHHcC---CCCHHHHHHhhcCcccc-cCc
Q 004891 309 RKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRG---KLTQDKANNALKMLKGV-LDY 382 (725)
Q Consensus 309 ~kIaVIG-~G~mG~~iA~~l~~~G-~~V~~~d~~~e~~~~~~~~i~~~l~~~~~~g---~~~~~~~~~~~~~i~~~-~~~ 382 (725)
.||+|+| .|.+|..+++.|.++. ++|+.+..++....+.. +...... .+.... ..+.+. .+.
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 76 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKY-------KDACYWFQDRDIPENI-----KDMVVIPTDP 76 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBH-------HHHSCCCCSSCCCHHH-----HTCBCEESCT
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccH-------HHhcccccccccccCc-----eeeEEEeCCH
Confidence 6899999 7999999999998764 57776643322111100 0000000 000100 012111 233
Q ss_pred ccc-c-CCCEEEEeccCChHHHHHHHHHHHHhCCCCeEEEecCCCC
Q 004891 383 SEF-K-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (725)
Q Consensus 383 ~~l-~-~aDlVIeavpe~~~~k~~v~~~l~~~~~~~~ii~s~tS~~ 426 (725)
+.+ + ++|+||+|+| .....++...+. ..++.|+++++..
T Consensus 77 ~~~~~~~~DvV~~atp--~~~~~~~a~~~~---~aG~~VId~s~~~ 117 (354)
T 1ys4_A 77 KHEEFEDVDIVFSALP--SDLAKKFEPEFA---KEGKLIFSNASAY 117 (354)
T ss_dssp TSGGGTTCCEEEECCC--HHHHHHHHHHHH---HTTCEEEECCSTT
T ss_pred HHHhcCCCCEEEECCC--chHHHHHHHHHH---HCCCEEEECCchh
Confidence 334 6 8999999998 444445544443 3567788877754
No 496
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.48 E-value=0.31 Score=50.04 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=31.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHH
Q 004891 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (725)
Q Consensus 308 ~~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~ 343 (725)
+++|.|.|+ |.+|+.++..|++.|++|++.++++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN 38 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence 368999995 999999999999999999999998443
No 497
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.45 E-value=0.17 Score=53.52 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=30.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCh
Q 004891 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (725)
Q Consensus 309 ~kIaVIG~G~mG~~iA~~l~~~G~-~V~~~d~~~ 341 (725)
.+|.|||+|..|+.+|..|+.+|. +++++|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 479999999999999999999998 899999863
No 498
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.39 E-value=0.37 Score=48.86 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=34.8
Q ss_pred ceEEEE-cC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVI-G~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
.||++| |+ +-+|.++|..|++.|.+|++.|++++.+++..+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 377777 44 679999999999999999999999998876543
No 499
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=92.36 E-value=0.17 Score=51.78 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=35.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~~ 350 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+.
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~ 69 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQ 69 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 56777776 8999999999999999999999999877665443
No 500
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.36 E-value=0.12 Score=52.44 Aligned_cols=41 Identities=22% Similarity=0.137 Sum_probs=34.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCChHHHHHHHH
Q 004891 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (725)
Q Consensus 309 ~kIaVIG~-G~mG~~iA~~l~~~G~~V~~~d~~~e~~~~~~~ 349 (725)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 64 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLK 64 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45666665 899999999999999999999999987766543
Done!