BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004894
(724 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZLW3|DYM_CHICK Dymeclin OS=Gallus gallus GN=DYM PE=2 SV=1
Length = 669
Score = 318 bits (815), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 216/670 (32%), Positives = 355/670 (52%), Gaps = 47/670 (7%)
Query: 38 FWQKLLELPLS-------LHWPSHRVHQACEAFAQNNCYTRHLAKIL-IHLTWCLQECIS 89
FW +LL + L C++ + N T +L ++ + L+ + IS
Sbjct: 32 FWNQLLSFSFTTPTNSADLKLLEEATVSVCKSLVEKNPRTGNLGSLIKVFLSRTKELKIS 91
Query: 90 SSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEPLPKEFVLDQNIEN 149
+ + I +A NA++I LK I E + LH + ++ P + IE
Sbjct: 92 AECQNHLFIWQAHNALFIICCLLKVFISRMSEEELQ-LHFTYEDKTPGSYGTECEDLIEE 150
Query: 150 LV--MHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMT 207
L+ + ++ I L+D+ TY++ E + ++V +S QL L +H ++
Sbjct: 151 LLCCLIQLIVEIPLLDI---TYSISLEAVTTLIVFLSCQLFHKEILRESLIHKYLMRGRC 207
Query: 208 EESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSAAATIVLLPFNYL 267
+V+ LL N+I + R S S+ + + G+L + S AT + F
Sbjct: 208 --LPYTSRLVKTLLYNFIRQER-SPPPGSHVFQQQTDGGGLLYGIASGVATGLWTVFT-- 262
Query: 268 VSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNP 327
+ G ++ L CS L ++S+ + +D+ T NP
Sbjct: 263 LGGVGSKATPQLDQCSPLA-------------NQSLLLLLVLANLTDAPD------TPNP 303
Query: 328 YCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASLFDTLGMYLADETAVLLLYSLVQGN 386
Y A+ + ++ + D + S P V ++ F SL+ L + A LLLY L+ N
Sbjct: 304 YRQAIMSFKNTQ----DSSAFSSSHPHVFQINFNSLYTALCEQQKSDQATLLLYMLLHQN 359
Query: 387 SGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMIL 446
YVL RTD++ L++PILE LY+ ++ + +YM LIILLIL++D FN SIH++IL
Sbjct: 360 GNVRTYVLARTDIENLVLPILEILYHVEERNSHHVYMALIILLILTEDDGFNRSIHEVIL 419
Query: 447 PSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSA 506
++ WY E +L + SLGSLL++++IRT++YN+++ RD YLHT CLA LANM+ L
Sbjct: 420 KNITWYAERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLAALANMSAQFRSLHQ 479
Query: 507 YASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMSAELHIYTDFLRIVLEIL 565
YA+QR++SLF +LS+K+NK+ ++ +G+L DS D + +L++ + +R++LEI+
Sbjct: 480 YAAQRIISLFSLLSKKHNKVLEQATQSLRGSLDSNDSPLPDYAQDLNVIEEVIRMMLEII 539
Query: 566 NAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRLDAQRVDGE 625
N+ LT +L NP +VYA+L++ ++F+ F++HP F ++++NI V+ FF+SRL+ E
Sbjct: 540 NSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQDIMQNIDLVISFFSSRLE--HAGAE 597
Query: 626 WSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQESHPEEFFIPYVWQLVL-SRCGFSFN 684
SVE+VL+ I + D L+ F L F Y +E PEEFFIPYVW LV + +N
Sbjct: 598 LSVERVLEIIKQGAVALPKDRLRKFPELKFKYVEEEQPEEFFIPYVWSLVYNAAVALYWN 657
Query: 685 PSAINLFPVD 694
P I LF +D
Sbjct: 658 PRDIQLFTMD 667
>sp|B4F766|DYM_RAT Dymeclin OS=Rattus norvegicus GN=Dym PE=2 SV=1
Length = 674
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 219/678 (32%), Positives = 354/678 (52%), Gaps = 58/678 (8%)
Query: 38 FWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRHLAKIL-IHLTWCLQECIS 89
FW +L S S + C++ +NN T +LA + + L + +S
Sbjct: 32 FWNQLFSFSFSAPTSSTELKLLEEATISVCKSLVENNPRTGNLAALTKVFLARTRELRLS 91
Query: 90 SSGTASVAIMKAINAVYISSVFLK-YLIENAESENFEELHLSLDESEPLPKEF----VLD 144
+ + I + NA++I LK ++ E +E EEL L E LP + +L
Sbjct: 92 AECQNHIFIWQTHNALFIICCLLKVFICEMSE----EELQLHFTYEEKLPGTYTLCVLLG 147
Query: 145 QNIENLVMHSVLSFIALVDVSPH---TYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPF 201
+ E+L+ + S I L+ +P TY + E ++ M+V +S QL L H +
Sbjct: 148 SDSEDLLEELLCSLIQLITDTPLLDITYEISVEAISAMIVFLSCQLFHKEVLRQSISHKY 207
Query: 202 I--DAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSAAATI 259
+ + S LV + LL N+I R ++ + + G+L + S AT
Sbjct: 208 LMQGPCLPYTSKLV----KTLLYNFI-RQEKPPPPGTHVFPQQSDGGGLLYGLASGVATG 262
Query: 260 VLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKS 319
+ F + G +++P E + ++S
Sbjct: 263 LWTVFT--LGGVGSKAASP-------------------ELTSPLANQSLLLLLVLVNLTD 301
Query: 320 STHFTVNPYCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASLFDTLGMYLADETAVLL 378
+ NPY A+ + ++ + D S P ++ F SL+ TL + A LL
Sbjct: 302 APDIP-NPYRQAVTSFKNTQ----DSSPFPSSVPHTFQINFNSLYTTLCEQQTSDQATLL 356
Query: 379 LYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDSSFN 438
LY+L+ N+ Y+L RTD++ L++PILE LY+ ++ + +YM LIILLIL++D FN
Sbjct: 357 LYTLLHQNANVRTYMLARTDMENLVLPILEILYHVEERNSHHVYMALIILLILTEDDGFN 416
Query: 439 ASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMA 498
SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++ RD YLHT CLA LANM+
Sbjct: 417 RSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLAALANMS 476
Query: 499 PHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMSAELHIYTDF 557
L YA+QR++SLF +LS+K+NK+ ++ +G+L+ D D + +L + +
Sbjct: 477 AQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLSSSDVPLPDYAQDLSVIEEV 536
Query: 558 LRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRL 617
+R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP F ++++NI V+ FF+SRL
Sbjct: 537 IRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQDIMQNIDLVISFFSSRL 596
Query: 618 DAQRVDGEWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQESHPEEFFIPYVWQLVL- 676
+ E SVE+VL+ I + D LK F L F Y +E PEEFFIPYVW LV
Sbjct: 597 --LQSGAELSVERVLEIIKQGVVALPKDRLKKFPELKFKYVEEEQPEEFFIPYVWSLVYN 654
Query: 677 SRCGFSFNPSAINLFPVD 694
S G +NP I LF +D
Sbjct: 655 SAVGLYWNPQDIQLFAMD 672
>sp|Q8CHY3|DYM_MOUSE Dymeclin OS=Mus musculus GN=Dym PE=2 SV=1
Length = 669
Score = 308 bits (790), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 213/644 (33%), Positives = 338/644 (52%), Gaps = 46/644 (7%)
Query: 60 CEAFAQNNCYTRHLAKIL-IHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIEN 118
C++ +NN T +LA + + L+ + +S+ + I + NA++I LK I
Sbjct: 61 CKSLVENNPRTGNLAALTKVFLSRTRELRLSAECQNHIFIWQTHNALFIICCLLKVFIRE 120
Query: 119 AESENFEELHLSLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSPH---TYNLHQEL 175
E EL L E P + D E+L+ + S + L+ +P TY + E
Sbjct: 121 LSEE---ELQLHFTYEEKSPGSYSSDS--EDLLEELLCSLVQLITDTPLLDITYEIAVEA 175
Query: 176 LNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSS 235
++ M+V +S QL L H ++ +V+ LL N+I R
Sbjct: 176 ISAMVVFLSCQLFHKEVLRQSISHKYLMQGPC--LPYTSKLVKTLLYNFI-RQEKPPPPG 232
Query: 236 SYSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHK 295
++ + + G+L + S AT + F G GS K
Sbjct: 233 THVFPQQSDGGGLLYGLASGVATGLWTVFTL----GGAGS-------------------K 269
Query: 296 CVENDESITDRSDDSATSDSLAKSSTHF--TVNPYCNALENARDIEFGHMDLEGNAHSGP 353
+ E + ++ S + + T NPY A+ + ++ + D S P
Sbjct: 270 AAASPELTSPLANQSLLLLLVLVNLTDAPDIPNPYRQAVSSFKNTQ----DSSPFPSSIP 325
Query: 354 -VVRLPFASLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYN 412
++ F SL+ L + A LLLY+L+ NS YVL RTD++ L++PILE LY+
Sbjct: 326 HTFQINFNSLYTALCEQQTSDQATLLLYTLLHQNSNVRTYVLARTDMENLVLPILEILYH 385
Query: 413 ASKKTPNQIYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIR 472
++ + +YM LIILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IR
Sbjct: 386 VEERNSHHVYMALIILLILTEDDGFNRSIHEVILRNITWYSERVLTEISLGSLLILVVIR 445
Query: 473 TVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDD 532
T++YN+++ RD YLHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++
Sbjct: 446 TIQYNMTRTRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQ 505
Query: 533 K-KGNLTEQDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQ 591
+G L+ D D + +L + + +R++LEI+N+ LT +L NP +VYA+L++ ++F+
Sbjct: 506 SLRGPLSSSDVPLPDYAQDLSVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFE 565
Query: 592 PFKSHPRFNELLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKMFT 651
F++HP F ++++NI V+ FF+SRL + E SVE+VL+ I + D LK F
Sbjct: 566 QFRTHPSFQDIMQNIDLVISFFSSRL--LQAGAELSVERVLEIIKQGVVALPKDRLKKFP 623
Query: 652 RLYFSYEQESHPEEFFIPYVWQLVL-SRCGFSFNPSAINLFPVD 694
L F Y +E PEEFFIPYVW LV S G +NP I LF +D
Sbjct: 624 ELKFKYVEEEQPEEFFIPYVWSLVYNSAVGLYWNPQDIQLFAMD 667
>sp|Q7RTS9|DYM_HUMAN Dymeclin OS=Homo sapiens GN=DYM PE=1 SV=1
Length = 669
Score = 307 bits (786), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 227/694 (32%), Positives = 359/694 (51%), Gaps = 60/694 (8%)
Query: 20 EYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRH 72
EYL G +S FW +LL S + C + +NN T +
Sbjct: 15 EYL-KKLSGTESISENDPFWNQLLSFSFPAPTSSSELKLLEEATISVCRSLVENNPRTGN 73
Query: 73 L-AKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSL 131
L A I + L+ + +S+ + I + NA++I LK I E + LH +
Sbjct: 74 LGALIKVFLSRTKELKLSAECQNHIFIWQTHNALFIICCLLKVFICQMSEEELQ-LHFTY 132
Query: 132 DESEP--LPKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLS 189
+E P + + +++ I L+D+ TY + E ++ M+V +S QL
Sbjct: 133 EEKSPGNYSSDSEDLLEELLCCLMQLITDIPLLDI---TYEISVEAISTMVVFLSCQLFH 189
Query: 190 VPSLGPKDVHPFI--DAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPG 247
L H ++ + S LV + LL N+I R ++ + + G
Sbjct: 190 KEVLRQSISHKYLMRGPCLPYTSKLV----KTLLYNFI-RQEKPPPPGAHVFPQQSDGGG 244
Query: 248 VLQRVGSAAATIVLLPFNYL-VSSNGEGS---SNPLTDCSLLVLLVLIHYHKCVENDESI 303
+L + S AT + F V S S S+PL + SLL+ + ++
Sbjct: 245 LLYGLASGVATGLWTVFTLGGVGSKAAASPELSSPLANQSLLL----------LLVLANL 294
Query: 304 TDRSDDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGP-VVRLPFASL 362
TD SD NPY A+ + ++ + D S P ++ F SL
Sbjct: 295 TDASD---------------APNPYRQAIMSFKNTQ----DSSPFPSSIPHAFQINFNSL 335
Query: 363 FDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIY 422
+ L + A LLLY+L+ NS Y+L RTD++ L++PILE LY+ ++ + +Y
Sbjct: 336 YTALCEQQTSDQATLLLYTLLHQNSNIRTYMLARTDMENLVLPILEILYHVEERNSHHVY 395
Query: 423 MLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLR 482
M LIILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++ R
Sbjct: 396 MALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNMTRTR 455
Query: 483 DVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQD 541
D YLHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L+ D
Sbjct: 456 DKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLSSND 515
Query: 542 SFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNE 601
D + +L++ + +R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP F +
Sbjct: 516 VPLPDYAQDLNVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSFQD 575
Query: 602 LLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQES 661
+++NI V+ FF+SRL + E SVE+VL+ I + D LK F L F Y +E
Sbjct: 576 IMQNIDLVISFFSSRL--LQAGAELSVERVLEIIKQGVVALPKDRLKKFPELKFKYVEEE 633
Query: 662 HPEEFFIPYVWQLVL-SRCGFSFNPSAINLFPVD 694
PEEFFIPYVW LV S G +NP I LF +D
Sbjct: 634 QPEEFFIPYVWSLVYNSAVGLYWNPQDIQLFTMD 667
>sp|Q6DCP6|DYM_XENLA Dymeclin OS=Xenopus laevis GN=dym PE=2 SV=1
Length = 669
Score = 305 bits (781), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 218/688 (31%), Positives = 357/688 (51%), Gaps = 48/688 (6%)
Query: 20 EYLIATFVGEKSFPLASDFWQKLLELPLSLHWPSHRVHQA---------CEAFAQNNCYT 70
EYL G S FW +LL LS P++ C++ +NN T
Sbjct: 15 EYL-KKLSGMDSISENEPFWNQLLSFTLST--PTNSADSKLLEEGTLSICKSLIENNPRT 71
Query: 71 RHL-AKILIHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHL 129
+L A I + L+ + IS+ + I +A NA++I +K E LH
Sbjct: 72 GNLGALIRVFLSRTKELKISAECQNQLFIWQAHNALFIICCLIKVFTSQVSEEELL-LHF 130
Query: 130 SLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLS 189
+ ++P E + E L+ ++ I + + TY++ E + ++V +S QL
Sbjct: 131 TYRATDPGNYEADTEDLFEELLF-CLIQLIVEIPLLDLTYSILLEAVTALIVLLSYQLFH 189
Query: 190 VPSLGPKDVHP-FIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGV 248
L +H ++ +S +V+ LL N+I R S S+ +++ G+
Sbjct: 190 KDILHESPIHKHLMNGRCLPYTS---RLVKTLLYNFI-RQEKSPPPGSHIFPQQQDGGGL 245
Query: 249 LQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSD 308
L + S A+ + + V + G S P E + ++S
Sbjct: 246 LYGLASGVASGI-----WTVLTLGGVGSKPTPQ---------------QEQSSPLANQSL 285
Query: 309 DSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGM 368
S S NP+ ++ ++ + + N HS ++ F SL+ +L
Sbjct: 286 LLLLVLSNLTDSPD-CPNPFRQSVTFFKNTQDSSVSPTPNPHS---FQINFNSLYTSLCE 341
Query: 369 YLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIIL 428
+ A LLLY+L+ NS YVL R+D++ L++PILE LY+ ++ + +YM LIIL
Sbjct: 342 QQKSDQATLLLYTLLHQNSNVRTYVLARSDMENLVLPILEILYHVEERNSHHVYMALIIL 401
Query: 429 LILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHT 488
LIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT+++N+++ RD YLHT
Sbjct: 402 LILTEDDGFNRSIHEVILKNITWYTERVLTEISLGSLLILVVIRTIQFNMTRTRDKYLHT 461
Query: 489 TCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDM 547
CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L +S D
Sbjct: 462 NCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLGSDESPLPDY 521
Query: 548 SAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIY 607
+ +L++ + +R++LEI+N+ LT +L NP +VYA+L++ E+F+ F+SHP F ++++NI
Sbjct: 522 AQDLNVIEEVIRMMLEIINSCLTNSLHHNPNMVYALLYKRELFEQFRSHPSFQDIMQNID 581
Query: 608 TVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQESHPEEFF 667
V+ FF+ RL+ D SVE+VL+ I + D L+ F L F Y +E PEEFF
Sbjct: 582 MVISFFSLRLEQAGAD--LSVERVLEVIKQGAVALPKDRLRKFPELKFKYVEEEQPEEFF 639
Query: 668 IPYVWQLVL-SRCGFSFNPSAINLFPVD 694
IPYVW LV S G +NP + LF +D
Sbjct: 640 IPYVWSLVYHSGVGLYWNPQDVQLFTMD 667
>sp|Q5RAW5|DYM_PONAB Dymeclin OS=Pongo abelii GN=DYM PE=2 SV=1
Length = 669
Score = 305 bits (780), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 224/696 (32%), Positives = 353/696 (50%), Gaps = 79/696 (11%)
Query: 28 GEKSFPLASDFWQKLLELPLSLHWPSHRVH-------QACEAFAQNNCYTRHL-AKILIH 79
G +S FW +LL S + C + +NN T +L A I +
Sbjct: 22 GTESISENDPFWNQLLSFSFPAPTSSTELKLLEEATISVCRSLVENNPRTGNLGALIKVF 81
Query: 80 LTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEP--L 137
L+ + +S+ + I + NA++I LK I E + LH + +E P
Sbjct: 82 LSRTKELKLSAECQNHIFIWQTHNALFIICCLLKVFICQMSEEELQ-LHFTYEEKSPGNY 140
Query: 138 PKEFVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNFMLVAMSTQLLSVPSLGPKD 197
+ + +++ I L+D+ TY + E ++ M+V +S QL L
Sbjct: 141 SSDSEDLLEELLCCLMQLITDIPLLDI---TYEISVEAISTMVVFLSCQLFHKEVLRQSI 197
Query: 198 VHPFI--DAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGSA 255
H ++ + S LV + LL N+I R ++ + + G+L + S
Sbjct: 198 SHKYLMRGPCLPYTSKLV----KTLLYNFI-RQEKPPPPGAHVFPQQSDGGGLLYGLASG 252
Query: 256 AATIVLLPFNYLVSSNGEGS--------SNPLTDCSLLVLLVLIHYHKCVENDESITDRS 307
AT + F G GS S+PL + SLL+ + ++TD S
Sbjct: 253 VATGLWTVFTL----GGVGSKVAASPELSSPLANQSLLL----------LLVLANLTDAS 298
Query: 308 DDSATSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGP-------VVRLPFA 360
D NPY A+ M + S P ++ F
Sbjct: 299 DAP---------------NPYRQAI----------MSFKNTQDSSPFPPLIPHAFQINFN 333
Query: 361 SLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQ 420
SL+ L + A LLLY+L+ NS Y+L RTD++ L++PILE LY+ ++ +
Sbjct: 334 SLYTALCEQQTSDQATLLLYTLLHQNSNIRTYMLARTDMENLVLPILEILYHVEERNSHH 393
Query: 421 IYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSK 480
+YM LIILLIL++D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++
Sbjct: 394 VYMALIILLILTEDDGFNRSIHEVILKNITWYSERVLTEISLGSLLILVVIRTIQYNMTR 453
Query: 481 LRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTE 539
RD YLHT CLA LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L+
Sbjct: 454 TRDKYLHTNCLAALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLSS 513
Query: 540 QDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRF 599
D D + +L++ + +R++LEI+N+ LT +L NP +VYA+L++ ++F+ F++HP F
Sbjct: 514 NDVPLPDYAQDLNVIEEVIRMMLEIINSCLTNSLHHNPNLVYALLYKRDLFEQFRTHPSF 573
Query: 600 NELLENIYTVLDFFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQ 659
++++NI V+ FF+SRL + E SVE+VL+ I + D LK F L F Y +
Sbjct: 574 QDIMQNIDLVITFFSSRL--LQAGAELSVERVLEIIKQGVVALPKDRLKKFPELKFKYVE 631
Query: 660 ESHPEEFFIPYVWQLVL-SRCGFSFNPSAINLFPVD 694
E PEEFFIPYVW LV S G +NP I LF +D
Sbjct: 632 EEQPEEFFIPYVWSLVYNSAVGLYWNPQDIQLFTMD 667
>sp|Q28BM0|DYM_XENTR Dymeclin OS=Xenopus tropicalis GN=dym PE=2 SV=1
Length = 669
Score = 303 bits (775), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 217/684 (31%), Positives = 349/684 (51%), Gaps = 55/684 (8%)
Query: 28 GEKSFPLASDFWQKLLELPLSLHWPSHRVHQA---------CEAFAQNNCYTRHL-AKIL 77
G S FW +LL S P++ C++ +NN T +L A I
Sbjct: 22 GTDSISENEPFWNQLLSFSFST--PTNSADSKLLEEGTLSICKSLIENNPRTGNLGALIR 79
Query: 78 IHLTWCLQECISSSGTASVAIMKAINAVYISSVFLKYLIENAESENFEELHLSLDESEPL 137
+ L+ + IS+ + I +A NA++I +K E LH + ++P
Sbjct: 80 VFLSRTKELKISAECQNQLFIWQAHNALFIICRLIKVFTSQISEEELL-LHFTYRPADPG 138
Query: 138 PKEFVLDQNIENLVMHSVLSFIALVDVSPH---TYNLHQELLNFMLVAMSTQLLSVPSLG 194
E + ENL + I L+ P TY++ E + ++V +S QL L
Sbjct: 139 NYE----SDTENLFEELLFCLIQLIVEIPLLDLTYSILLEAVTALIVLLSYQLFRKDILH 194
Query: 195 PKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSSYSIFSEENQPGVLQRVGS 254
+H + +V+ LL N+I R S S+ +++ G+L + S
Sbjct: 195 ESPIHRHLMKGPC--LPYTSRLVKTLLYNFI-RQEKSPPPGSHIFPQQQDGGGLLYGLAS 251
Query: 255 AAATIVLLPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSD 314
A+ + +++ G GS K E + ++ S
Sbjct: 252 GVASGIWT----VLTLGGVGS-------------------KPTPQQEQSSPLANQSLLLL 288
Query: 315 SLAKSSTHF--TVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLAD 372
+ + T NP+ ++ R+ + + N HS ++ F SL+ L
Sbjct: 289 LVLSNLTDAPDCPNPFRQSVTFFRNTQDSSVSPTPNPHS---FQINFNSLYTALCEQQKS 345
Query: 373 ETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILS 432
+ A LLLY+L+ NS YVL R+D++ L++PILE LY+ + + +YM LIILLIL+
Sbjct: 346 DQATLLLYTLLHQNSNVRTYVLARSDMENLVLPILEILYHVEDRNSHHVYMALIILLILT 405
Query: 433 QDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLA 492
+D FN SIH++IL ++ WY E +L + SLGSLL++++IRT++YN+++ RD YLHT CLA
Sbjct: 406 EDDGFNRSIHEVILKNITWYTERVLTEISLGSLLILVVIRTIQYNMTRTRDKYLHTNCLA 465
Query: 493 TLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDK-KGNLTEQDSFAEDMSAEL 551
LANM+ L YA+QR++SLF +LS+K+NK+ ++ +G+L +S D + +L
Sbjct: 466 ALANMSAQFRSLHQYAAQRIISLFSLLSKKHNKVLEQATQSLRGSLGSDESPLPDYAQDL 525
Query: 552 HIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLD 611
++ + +R++LEI+N+ LT +L NP +VYA+L++ E+F+ F+SHP F ++++NI V+
Sbjct: 526 NVIEEVIRMMLEIINSCLTNSLHHNPNMVYALLYKRELFEQFRSHPSFQDIMQNIDMVIS 585
Query: 612 FFNSRLDAQRVDGEWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQESHPEEFFIPYV 671
FF+ RL+ D SVE+VL+ I + D L+ F L F Y +E PEEFFIPY
Sbjct: 586 FFSLRLEQAGAD--LSVERVLEVIKQGAVALPKDRLRKFPELKFKYVEEEQPEEFFIPYA 643
Query: 672 WQLVL-SRCGFSFNPSAINLFPVD 694
W LV S G +NP I LF +D
Sbjct: 644 WSLVYHSGVGLYWNPQDIQLFTMD 667
>sp|Q293C2|DYM_DROPS Dymeclin OS=Drosophila pseudoobscura pseudoobscura GN=GA20914 PE=3
SV=1
Length = 700
Score = 282 bits (722), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 215/715 (30%), Positives = 342/715 (47%), Gaps = 104/715 (14%)
Query: 38 FWQKLLELPLSLHWPSH-------RVHQACEAFAQNNCYTRHLAKILIHLTWCLQECIS- 89
FW LL + L S R+ C++F NN T + ++ E +S
Sbjct: 33 FWNGLLNYNIVLPENSQDQLNLDSRLETLCQSFIGNNLKTGNFGSLVTVFLEKTSELLSL 92
Query: 90 SSGTASVAIMKAINAVYISSVFLKYLIENAES----ENFEEL------HLSLDESEPLPK 139
S +++ + + NA++I +KY+ E ++FE L +++ + P
Sbjct: 93 SDQESNMHVWQTFNALFIIRTLVKYINETGSEFQLLQHFEALPSAELVQAAVELQQQTPA 152
Query: 140 E---------------------FVLDQNIENLVMHSVLSFIALVDVSPHTYNLHQELLNF 178
E FV E + ++++ I ++ V TY+LH E +N
Sbjct: 153 ESATIAIEATEQAAAAAASAPVFVDGAKFETFI-DALVNLIVVIPVKEFTYHLHLEAVNM 211
Query: 179 MLVAMSTQLLSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYITRPRISVNSSS-- 236
++ +S L + V F + ++++ S + + + P SSS
Sbjct: 212 LITLLSVHLFAQQPTEKSIV--FRTVFKCQHANVLMSALLHFVARMVEVPHTMFGSSSAG 269
Query: 237 ----------YSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEGSSNPLTDCSLLV 286
SIF+ Q VL + +A + L F + PL + SLL+
Sbjct: 270 SIVFGIAESLLSIFTFRKQQDVL-KASNAVGGELSLQFR---------THYPLANQSLLL 319
Query: 287 LLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNPYCNALENA-RDIEFGHMDL 345
+L+L ++ C A ENA R FG D
Sbjct: 320 ILILTNH-----------------------------------CTAQENAYRASLFGCADS 344
Query: 346 EGNAHSGPV-VRLPFASLFDTLGMYLADETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLM 404
+ + G V ++ F+++++TL + + A LLLY L+ N F +V+ + DL+ L++
Sbjct: 345 KDSPKQGTVSFQIDFSAVYETLCRIVTIDQATLLLYLLLHRNERFYRFVMQQQDLEQLVI 404
Query: 405 PILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMILPSVPWYKEHLLHQTSLGS 464
PIL+TLYNA + IYM LI+LLILS+D FN ++H ++L ++ WY E + + SLG
Sbjct: 405 PILQTLYNAPDSNSHHIYMSLIVLLILSEDEGFNKNVHTIMLKNITWYTERSISEISLGG 464
Query: 465 LLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAYASQRLVSLFYMLSRKYN 524
+L++I+IRT++YN+ K+RD YLHT CLA LANM+ H L Y +QRLVSLF L+RK+
Sbjct: 465 ILILIVIRTIQYNMLKMRDKYLHTNCLAALANMSGHFRALHPYVAQRLVSLFETLARKHT 524
Query: 525 KIADRRDDKKGN--LTEQDSFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYA 582
++ + + + + AEDM +L + + LR+VLEILN+ LT L P +VY
Sbjct: 525 RLDAQLKEPADSAVFVNVVTTAEDMLQDLSVLEEVLRMVLEILNSCLTNQLVYCPNLVYT 584
Query: 583 ILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRLD-AQRVDGEWSVEKVLQSIIINCRS 641
+L++ VF+ F+SH F ++++NI V+ FF+SRL Q GE V +VL+ I
Sbjct: 585 LLYKRSVFEGFRSHHAFQDVVQNIDMVVGFFSSRLQRVQEQRGELGVNEVLEVISKGASQ 644
Query: 642 WRGDGLKMFTRLYFSYEQESHPEEFFIPYVWQLVLSRCGFSFNPSAINLFPVDLP 696
W D L+ F L F Y +E PEEFFIPYVW LV F+ +I D+
Sbjct: 645 WSSDRLRKFPDLKFKYVEEDAPEEFFIPYVWTLVCKYGCVHFSSESIKTVTTDIA 699
>sp|Q7KNA0|DYM_DROME Dymeclin OS=Drosophila melanogaster GN=CG8230 PE=1 SV=1
Length = 699
Score = 281 bits (718), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 216/731 (29%), Positives = 347/731 (47%), Gaps = 114/731 (15%)
Query: 26 FVGEKSFPLASD---FWQKLLELPLSLHWPSH-------RVHQACEAFAQNNCYTRHLAK 75
FVG + +A D FW LL + L S R+ C++F NN T +
Sbjct: 20 FVGRQH--IAHDDEAFWNGLLNYNIVLPENSQDQLNLDSRLEALCQSFIGNNLKTGNFGS 77
Query: 76 ILIHLTWCLQECIS-SSGTASVAIMKAINAVYISSVFLKYLIENAES----ENFEEL--- 127
++ E +S S +++ + + NA++I +KY+ E ++FE +
Sbjct: 78 LVTVFLEKTSELLSLSDQESNMHVWQTFNALFIIRSLVKYINETGSEFQLLQHFEAMPNA 137
Query: 128 ---------------------HLSLDESEPLPKEFVLDQNIENLVMHSVLSFIALVDVSP 166
+ ++S ++D + + ++++ I ++ V
Sbjct: 138 ELLQAALEQQQQTPAESATIAMEATEQSAAAAVPVIVDGSKFETFIDALVNLIVVIPVKE 197
Query: 167 HTYNLHQELLNFMLVAMSTQLLSVPSLGPKDVHPFIDAAMTEESSLVCSVVRRLLLNYIT 226
TY+LH E +N ++ +S L + V F + ++++ S + + +
Sbjct: 198 FTYHLHLEAVNMLITLLSVHLFAQQPTDKSIV--FRTVFKCQHANVLMSALLHFVARIVE 255
Query: 227 RPRISVNSSS------------YSIFSEENQPGVLQRVGSAAATIVLLPFNYLVSSNGEG 274
P SSS SIF+ QP +L + G AA GE
Sbjct: 256 VPHTMFGSSSAGSFVFGIAESLLSIFTFRKQPDIL-KAGQAAG-------------GGEL 301
Query: 275 SSN-----PLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSSTHFTVNPYC 329
S PL + SLL++L+L ++ C
Sbjct: 302 SQRFRTHYPLANQSLLLILILTNH-----------------------------------C 326
Query: 330 NALENA-RDIEFGHMDLEGNAHSGPV-VRLPFASLFDTLGMYLADETAVLLLYSLVQGNS 387
A +NA R F D + + G V ++ F+++++TL + + A LLLY L+ N
Sbjct: 327 TAQDNAYRTSLFSCADSKDSPKQGAVSFQIDFSAVYETLCTIVTIDQATLLLYLLLHRNE 386
Query: 388 GFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLILSQDSSFNASIHKMILP 447
F +V+ + DL+ L++PIL+TLYNA + IYM LI+LLILS+D FN ++H ++L
Sbjct: 387 RFYRFVMQQQDLEQLVIPILQTLYNAPDSNSHHIYMSLIVLLILSEDEGFNKNVHTIMLK 446
Query: 448 SVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCLATLANMAPHVHRLSAY 507
++ WY E + + SLG +L++I+IRT++YN+ K+RD YLHT CLA LANM+ H L Y
Sbjct: 447 NITWYTERTISEISLGGILILIVIRTIQYNMLKMRDKYLHTNCLAALANMSGHFRALHPY 506
Query: 508 ASQRLVSLFYMLSRKYNKIADRRDDKKGN--LTEQDSFAEDMSAELHIYTDFLRIVLEIL 565
+QRLVSLF L+RK+ ++ + + + + EDM +L + + LR+VLEIL
Sbjct: 507 VAQRLVSLFETLARKHTRLDAQLKEPADSAVFVNVSTTPEDMLQDLSVLEEVLRMVLEIL 566
Query: 566 NAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNELLENIYTVLDFFNSRLD-AQRVDG 624
N+ LT L P +VY +L++ VF+ F+SH F ++++NI V+ FF+SRL Q G
Sbjct: 567 NSCLTNQLVYCPNLVYTLLYKRSVFEGFRSHHAFQDVIQNIDMVVGFFSSRLQRVQEQRG 626
Query: 625 EWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSYEQESHPEEFFIPYVWQLVLSRCGFSFN 684
E V +VL+ I W D L+ F L F Y +E PEEFFIPYVW LV F+
Sbjct: 627 ELGVNEVLEVISKGASQWSSDRLRKFPDLKFKYVEEDAPEEFFIPYVWTLVCKYGCVHFS 686
Query: 685 PSAINLFPVDL 695
+I D+
Sbjct: 687 SESIKSVTTDI 697
>sp|B0G194|DYM_DICDI Dymeclin OS=Dictyostelium discoideum GN=dym PE=3 SV=1
Length = 931
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 155/516 (30%), Positives = 263/516 (50%), Gaps = 86/516 (16%)
Query: 56 VHQACEAFAQNNCYTRHLAKILIHLTWCL----QECISSS-------GTASVAIMKA--- 101
+++ + NN T++ +IL+H L Q+ I+ S G+ I+
Sbjct: 118 LNELSKQLVSNNLKTKNFNRILMHFINKLNLFNQQLITISESMKKNKGSKQQLILDQSVE 177
Query: 102 ----------INAVYISSVFLKYLIENAESENFEELHLSLDES--EPLPKEFVLDQNIEN 149
+N + F KY+IEN + N + E+ + +P + +L
Sbjct: 178 IQLYTHQQFLVNYTILIQTFSKYIIENMDHVNIIQQFTGDSENSFKTIPFDLIL------ 231
Query: 150 LVMHSVLSFIA--LVDVSPHTYNLHQELLNFMLVAMSTQL-LSVPSLGPKDVHPF--IDA 204
S+L F++ L D S Y+LH LL F+L+ ST++ L +P++ + +D
Sbjct: 232 ----SILGFLSNELRDCS---YDLHDVLLRFILILFSTEMYLPLPTIQENYLTDTFTVDF 284
Query: 205 AMTEESSLVCSVVRRLLLNYITRPRIS--VNSSSYSIFSE--ENQP------GVLQRVGS 254
+ E + ++ +L++ + S V S +++F+ EN+P +L +GS
Sbjct: 285 SFYELLAPKTNIFLNILMDTVYNNPNSPIVYSFIFNLFNNIIENKPPPSTSNSLLDSIGS 344
Query: 255 AAATIVLLPFN---YLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSA 311
AA+ ++LLP N Y N + N +T+ S LLVL+ Y+
Sbjct: 345 AASYLLLLPLNAYKYFFPQNN-ATGNSMTELSTFNLLVLVQYN----------------- 386
Query: 312 TSDSLAKSSTHFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLA 371
+ NP+ L N +D +F +DL + + +R+ L++++ +
Sbjct: 387 ----------YPKGNPFRKILSNIQDKDFS-IDLLNSNPNNHQIRISMQQLYESIIKSPS 435
Query: 372 DETAVLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNASKKTPNQIYMLLIILLIL 431
+ +LLLY L+Q NS F YV RTDLD LL+P+++ LYN+ ++ P Q+ M+LII+LIL
Sbjct: 436 SDKNILLLYYLLQENSFFFRYVQSRTDLDNLLLPMIQILYNSFEEKPQQVNMILIIILIL 495
Query: 432 SQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCL 491
SQDS FN ++H +I+ + WYKE LL SLG +L+++LI+++ NLSKLRD +LHT CL
Sbjct: 496 SQDSLFNENVHSLIVHQILWYKERLLIDVSLGGILMVVLIKSIILNLSKLRDAHLHTNCL 555
Query: 492 ATLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIA 527
A LAN++ ++ + Y + RLV L +LS++Y K+
Sbjct: 556 AILANLSSNISHIHPYVANRLVKLLEILSKRYIKLK 591
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 83/159 (52%), Gaps = 6/159 (3%)
Query: 542 SFAEDMSAELHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRFNE 601
+ E S EL +++FL IVL+I+N LTY NP ++Y++LH++E F F + +
Sbjct: 672 NLKELQSEELTTHSEFLYIVLQIINNTLTYRAYSNPHLIYSLLHQQEYFPVFLNEENLSS 731
Query: 602 LLENIYTVLDFFNSRLDAQRVDG----EWSVEKVLQSIIINCRSWRGDGLKMFTRLYFSY 657
L NI +L +F+S L ++G E + E ++ I +S L F Y
Sbjct: 732 LSNNILNILSYFSSEL-KHAINGLSQQETTAETIMSFIESKSKSLPVPPPDQEGILRFKY 790
Query: 658 EQESHPEEFFIPYVWQLVLSRCGFSFNPSAINLFP-VDL 695
E+ES EF PYVW ++ + G ++ I LFP VDL
Sbjct: 791 EEESTSFEFITPYVWSIIFNYSGEKWDTKNITLFPTVDL 829
>sp|Q8R1F6|HID1_MOUSE Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1
Length = 788
Score = 59.7 bits (143), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 148/347 (42%), Gaps = 55/347 (15%)
Query: 262 LPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSST 321
+P+N+L+ S+ PL + + VL+V + + ++ + +A D+
Sbjct: 266 IPYNHLLFSD---YREPLVEEAAQVLIVTLDHDSATSTSPTVDGTTTGTAMDDADPPGPE 322
Query: 322 HFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLADETA------ 375
+ VN Y + + D +F L+G + RL L T YL + T
Sbjct: 323 NLFVN-YLSRIHREEDFQF---ILKG------IARLLSNPLLQT---YLPNSTKKIQFHQ 369
Query: 376 --VLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNA--SKKTPNQIYMLLIILLIL 431
++L + L N FL +VL +D+ +L+PIL L +A + +++ + ILL+L
Sbjct: 370 ELLVLFWKLCDFNKKFLFFVLKSSDVLDILVPILYFLNDARADQSRVGLMHIGVFILLLL 429
Query: 432 SQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCL 491
S + +F ++K VP + + + LL+++ + + +L+ ++ CL
Sbjct: 430 SGERNFGVRLNKPYSVRVP--MDIPVFTGTHADLLIVVFHKIITSGHQRLQPLF---DCL 484
Query: 492 ATLA-NMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAE 550
T+ N++P++ LS + +L+ L S + F S
Sbjct: 485 LTIVVNVSPYLKSLSMVTANKLLHLLEAFSTTW-------------------FLFSASQN 525
Query: 551 LHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHP 597
H+ + +LE+ N I+ Y N +VYAI+ + VF + P
Sbjct: 526 HHL----VFFLLEVFNNIIQYQFDGNSNLVYAIIRKRAVFHQLANLP 568
>sp|Q8IV36|HID1_HUMAN Protein HID1 OS=Homo sapiens GN=HID1 PE=1 SV=1
Length = 788
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 149/347 (42%), Gaps = 55/347 (15%)
Query: 262 LPFNYLVSSNGEGSSNPLTDCSLLVLLVLIHYHKCVENDESITDRSDDSATSDSLAKSST 321
+P+N+L+ S+ PL + + VL+V + + ++ + +A D+
Sbjct: 266 IPYNHLLFSD---YREPLVEEAAQVLIVTLDHDSASSASPTVDGTTTGTAMDDADPPGPE 322
Query: 322 HFTVNPYCNALENARDIEFGHMDLEGNAHSGPVVRLPFASLFDTLGMYLADETA------ 375
+ VN Y + + D +F L+G + RL L T YL + T
Sbjct: 323 NLFVN-YLSRIHREEDFQF---ILKG------IARLLSNPLLQT---YLPNSTKKIQFHQ 369
Query: 376 --VLLLYSLVQGNSGFLEYVLVRTDLDTLLMPILETLYNA--SKKTPNQIYMLLIILLIL 431
++L + L N FL +VL +D+ +L+PIL L +A + +++ + ILL+L
Sbjct: 370 ELLVLFWKLCDFNKKFLFFVLKSSDVLDILVPILFFLNDARADQSRVGLMHIGVFILLLL 429
Query: 432 SQDSSFNASIHKMILPSVPWYKEHLLHQTSLGSLLVIILIRTVKYNLSKLRDVYLHTTCL 491
S + +F ++K VP + + + LL+++ + + +L+ ++ CL
Sbjct: 430 SGERNFGVRLNKPYSIRVP--MDIPVFTGTHADLLIVVFHKIITSGHQRLQPLF---DCL 484
Query: 492 ATLA-NMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAE 550
T+ N++P++ LS + +L+ L S + + +A+
Sbjct: 485 LTIVVNVSPYLKSLSMVTANKLLHLLEAFSTTWFLFS--------------------AAQ 524
Query: 551 LHIYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHP 597
H FL LE+ N I+ Y N +VYAI+ + +F + P
Sbjct: 525 NHHLVFFL---LEVFNNIIQYQFDGNSNLVYAIIRKRSIFHQLANLP 568
>sp|Q54JJ6|HID1_DICDI Protein HID1 OS=Dictyostelium discoideum GN=hid1 PE=3 SV=1
Length = 905
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 34/209 (16%)
Query: 386 NSGFLEYVLVRTDLDTLLMPILETLYNA--SKKTPNQIYMLLIILLILSQDSSFNASIHK 443
N FL ++ + L+P+L+ + S+ T + + ILL+LS + F+ S++K
Sbjct: 472 NHDFLRSIVNYENSPEFLIPLLQYMDEGRKSQTTHGIVQIGTFILLLLSGERDFSISLNK 531
Query: 444 MILPSVPWYKEHL-LHQTSLGSLLVI-ILIRTVKYNLSKLRDVYLHTTCLATLANMAPHV 501
+ + H+ + Q + S VI ++ R + +L +Y L L+N++P++
Sbjct: 532 PFVGRI-----HIDIQQPQVYSDFVITVMYRLLVDTPDRLESIY--ECVLTILSNLSPYM 584
Query: 502 HRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAELHIYTDFLRIV 561
LS +L+ LF LS T + FA + + + Y FL
Sbjct: 585 KNLSMVTCVKLMKLFEYLS-----------------TPRFLFATNHN---YRYVGFL--- 621
Query: 562 LEILNAILTYALPRNPEVVYAILHREEVF 590
LE LN +L + N ++YAIL + F
Sbjct: 622 LESLNNLLQHQYESNTRLIYAILRCQNQF 650
>sp|Q17X31|LGT_HELAH Prolipoprotein diacylglyceryl transferase OS=Helicobacter
acinonychis (strain Sheeba) GN=lgt PE=3 SV=1
Length = 283
Score = 35.0 bits (79), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 493 TLANMAPHVHRLSAYASQRLVSLFYMLSRKYNKIADRRDDKKGNLTEQDSFAEDMSAELH 552
+L ++ H + L AYA +++ FYM R K D K+ + +D + + AEL
Sbjct: 17 SLGSIEVHWYGL-AYACAIVIA-FYMALRMIQK-----DPKRFPVARKDFESYFLWAELG 69
Query: 553 IYTDFLRIVLEILNAILTYALPRNPEVVYAILHREEVFQPFKSHPRF 599
I +L A + Y L P Y + H ++F PF SH F
Sbjct: 70 I----------VLGARIGYILIYEPNSSYYLTHFWQIFNPFDSHGNF 106
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 257,902,529
Number of Sequences: 539616
Number of extensions: 10492561
Number of successful extensions: 23061
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 23011
Number of HSP's gapped (non-prelim): 20
length of query: 724
length of database: 191,569,459
effective HSP length: 125
effective length of query: 599
effective length of database: 124,117,459
effective search space: 74346357941
effective search space used: 74346357941
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)