BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004898
(724 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/730 (74%), Positives = 601/730 (82%), Gaps = 27/730 (3%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKEVEK +DPQLWHACAGSMVQIPP+NS VFYFPQGHAEHS V+F SSRIP L+ CR
Sbjct: 1 MKEVEKRLDPQLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPVDF--SSRIPSLVLCR 58
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDN-NLSLNSVGSDSESEKPASFAKTLTQ 119
V+ +K+LADSETDEVYAKI L P+P+NE+DF D L S + +EKP SFAKTLTQ
Sbjct: 59 VAGVKYLADSETDEVYAKISLFPLPSNELDFGDEIGLCDTSTNGTNSTEKPTSFAKTLTQ 118
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT
Sbjct: 119 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 178
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGN---EYPSSGWNSNNGSC 236
TGWSTFVNQKKLVAGDSIVFLRA+ GDLCVGIRRAK+GIGGGN P SGW +N SC
Sbjct: 179 TGWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTN-ASC 237
Query: 237 VTGNPF-GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
V NP+ GGFS FL+E+E+K RNG G RG RVK E VLE+ ALA
Sbjct: 238 V--NPYTGGFSLFLKEDESKGLRNG-------------GGIRGKV-RVKAEEVLESAALA 281
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
A+G+PFEVVYYPRASTPEFCVKAS+V+A+ R+ W GMRFKMAFETEDSSRISWFMGTI+
Sbjct: 282 ANGQPFEVVYYPRASTPEFCVKASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIA 341
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
SVQVADPI WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP RKKL
Sbjct: 342 SVQVADPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKL 401
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
RLPQ LDFP DGQF +P FSGNPLGPSSPLCCLSDNT AGIQGARHAQFGIS SD + N
Sbjct: 402 RLPQHLDFPLDGQFQLPSFSGNPLGPSSPLCCLSDNTPAGIQGARHAQFGISLSDLQL-N 460
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
KLQSGLFLSSLQRF +SR + + S+TNS+ENLSCLLTMGNSN N EKS+N+K+HQF+
Sbjct: 461 KLQSGLFLSSLQRFNSHSRVSESFMKSNTNSNENLSCLLTMGNSNTNSEKSDNVKRHQFV 520
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFGQPI TEQQIS SCS D VSQVL K S S + D GST E++ S EKS+S+
Sbjct: 521 LFGQPILTEQQISRSCSTDAVSQVLSKKLSSDESPEKAKIHDVLGSTPEKQTSPEKSAST 580
Query: 596 EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDML 655
W +S TE+GLD GHCKVFLESEDVGRTLDLSVL SYEELY RLA MFGIERS+ML
Sbjct: 581 GLSW-QSLHTTETGLDAGHCKVFLESEDVGRTLDLSVLGSYEELYSRLANMFGIERSEML 639
Query: 656 SHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG-SGSDSVGRTWITGMRTPKNGLDAS 714
HVLY+DA+GAI++TGDEPFS F K+AKRLTILM + SD++GR WI GMR+ +NGL+AS
Sbjct: 640 HHVLYRDAAGAIRQTGDEPFSVFAKTAKRLTILMNPASSDNIGRPWIRGMRSTENGLEAS 699
Query: 715 NKTGPLSIFA 724
NK PLSIFA
Sbjct: 700 NKADPLSIFA 709
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 1051 bits (2718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/725 (73%), Positives = 605/725 (83%), Gaps = 15/725 (2%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE EKS+D QLWHACAG MVQ+P ++S VFYFPQGHAEH+ +V+F ++ RIP L+ CR
Sbjct: 1 MKETEKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPALVLCR 60
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V+++KF+AD ETDEVYAKI+LVPI NE+D ED+ + + S GS++ EKPASFAKTLTQS
Sbjct: 61 VAAVKFMADPETDEVYAKIRLVPIANNELDCEDDGV-MGSSGSEA-PEKPASFAKTLTQS 118
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHGEIWKFRHIYRGTPRRHLLTT
Sbjct: 119 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLTT 178
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFVNQKKLVAGDSIVFLRA++GDLCVGIRRAK+GI GG E PS GWN +
Sbjct: 179 GWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPS-GWNP-------AS 230
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+ GF FLRE+E+K+ RNG ++ GS R RV+PE V+EA LAA+G+P
Sbjct: 231 PYAGFPKFLREDESKLMRNGVGGNSNPGSGGGLRGGR----RVRPESVVEAATLAANGQP 286
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRASTPEFCVKAS V++A+R+ W GMRFKM FETEDSSRISWFMGTISSVQVA
Sbjct: 287 FEVVYYPRASTPEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVA 346
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DPI WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP+IHLSPFSP RKKLR+PQ
Sbjct: 347 DPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLRIPQH 406
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
DFPFDGQF M FS NPLG SSPLCCL DNT AGIQGARHAQ+GIS SD H+NNKLQSG
Sbjct: 407 PDFPFDGQFPMSSFSSNPLGSSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQSG 466
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQP 540
LF +S QRF +SR +GI+T+H ++E++SCLLTMGNS+QNLEKS N K QFLLFGQP
Sbjct: 467 LFPTSFQRFDQHSRITNGIITAHRKNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQP 526
Query: 541 IRTEQQISHSCSDDVVSQVL-GKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFW 599
I TEQQ+S +CS D VSQVL GKSSSDG SDK K SDG GST EQ+ E S+ F W
Sbjct: 527 ILTEQQMSRTCSSDAVSQVLTGKSSSDGSSDKAKKISDGLGSTLEQKGKPENLSNVGFSW 586
Query: 600 NRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVL 659
++ FQ TE GLDTGHCKVF+ESEDVGR+LDLSVL SYEELY RLA MFGIERS+ SHVL
Sbjct: 587 HQGFQTTEIGLDTGHCKVFMESEDVGRSLDLSVLGSYEELYTRLANMFGIERSETFSHVL 646
Query: 660 YQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNKTGP 719
Y+DA+GA+K TGDEPFSDF K AKRLTILM SGS+++GRTWITGMR +NGLD+SNKTGP
Sbjct: 647 YRDATGAVKHTGDEPFSDFTKKAKRLTILMDSGSNNIGRTWITGMRNAENGLDSSNKTGP 706
Query: 720 LSIFA 724
LSIFA
Sbjct: 707 LSIFA 711
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 1023 bits (2646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/732 (70%), Positives = 591/732 (80%), Gaps = 35/732 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
K +KS+DPQLW ACAGSMVQIPPLN+ VFYFPQGHAEHS V+FP RIP L+ CRV
Sbjct: 3 KTDKKSLDPQLWQACAGSMVQIPPLNTKVFYFPQGHAEHSQSPVDFPQ--RIPSLVLCRV 60
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-SEKPASFAKTLTQS 120
+S+KFLAD TDEV+AKI LVP+P ++D ++ + G+DS +EKPASFAKTLTQS
Sbjct: 61 ASVKFLADPGTDEVFAKISLVPLPDADLDIS-QDVDICGDGNDSNNAEKPASFAKTLTQS 119
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE+WKFRHIYRGTPRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRRHLLTT 179
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS----GWNSNNGSC 236
GWSTFVNQKKLVAGDSIVFLRA++GDLCVGIRRAK+G+G G+ SS GWNSNN +
Sbjct: 180 GWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESSPSHIGWNSNNAT- 238
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+ NP+GGFS ++E+E RNG + GRVK E VLEA LAA
Sbjct: 239 -SANPYGGFSLSVKEDE---MRNGGVK---------------GRGRVKSEEVLEAAGLAA 279
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G PF+VVYYPRASTPEFCVKAS+V+AAMR W GMRFKMAFETEDSSRISWFMGT++S
Sbjct: 280 NGNPFQVVYYPRASTPEFCVKASSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVAS 339
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
VQVADP WPNSPWRLLQVTWDEPDLLQ VK VSPWLVELVSNMPVIHLSPFSP RKKLR
Sbjct: 340 VQVADPDRWPNSPWRLLQVTWDEPDLLQTVKCVSPWLVELVSNMPVIHLSPFSPPRKKLR 399
Query: 417 LPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNK 476
PQQLDFP DGQF +P FSGNPLGPSSPLCCLSDNT AGIQGARHAQFGIS SDF K
Sbjct: 400 FPQQLDFPLDGQFQLPSFSGNPLGPSSPLCCLSDNTPAGIQGARHAQFGISLSDFQFKKK 459
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
LQSGLFLSSLQRF P +++ + T H +S++NLSCLLT G+SN LEKS+N KKHQFLL
Sbjct: 460 LQSGLFLSSLQRFNPRTKNSENYPTGHPDSNKNLSCLLTKGSSNPKLEKSDNAKKHQFLL 519
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLG-KSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
FGQPI EQQISHSCS D QV+ ++SSD + +K +SD S ++IS EKS ++
Sbjct: 520 FGQPILVEQQISHSCSADAFPQVVNERNSSDSNREK---NSDVLRSAPGKQISQEKSCTT 576
Query: 596 EFFWNRSFQVT-ESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
F W++S Q T E+G+DTGHCK FLESED+GRTLDLS L SYEEL R+LAIMFGIERSDM
Sbjct: 577 GFSWHQSLQNTSENGMDTGHCKAFLESEDLGRTLDLSALHSYEELRRKLAIMFGIERSDM 636
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGS-DSVG-RTWITGMRTPKNGLD 712
LSHVLY+D +GA+K+ GDEPFS FMK+AKRLTILM S +SVG RTWITGMR +NGL+
Sbjct: 637 LSHVLYRDVTGAVKQIGDEPFSVFMKTAKRLTILMNRASGNSVGRRTWITGMRNAENGLE 696
Query: 713 ASNKTGPLSIFA 724
A NKTGPLSIFA
Sbjct: 697 APNKTGPLSIFA 708
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/728 (68%), Positives = 592/728 (81%), Gaps = 16/728 (2%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE EK +DPQLWHACAG MVQ+P +NS VFYFPQGHAEH+ +V+F SS RIPPLI CR
Sbjct: 1 MKEAEKILDPQLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDFTSSLRIPPLIPCR 60
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V ++KFLAD ETDEV+A +++VP+P ++++FE+ S GS++ EKPASFAKTLTQS
Sbjct: 61 VLAVKFLADLETDEVFANVRMVPLPNSDLNFEEEG-GFGSSGSENNMEKPASFAKTLTQS 119
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDYTADPPVQTV+AKDVHGE+WKFRHIYRGTPRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTT 179
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFVNQKKLVAGDSIVFLR+++GDLCVGIRRAK+ IG +++P GWN G+C+
Sbjct: 180 GWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPY-GWNPGGGNCIP-- 236
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+GG + FLR+++NK++R G+++ + G G+V+PE V+EA ALAASG+P
Sbjct: 237 PYGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGK------GKVRPESVMEAAALAASGQP 290
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRASTPEFCVKAS+V+AAMR+ W GMRFKM FETEDSSRISWFMGTISSVQVA
Sbjct: 291 FEVVYYPRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVA 350
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DPI WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI LSPFSP RKK RLPQ
Sbjct: 351 DPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIQLSPFSPPRKKFRLPQH 410
Query: 421 LDFPFDGQFTMPL---FSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKL 477
DFP D QF PL FS N L PSSP+CCLSDNTS GIQGARH QFGIS SDFH+NNKL
Sbjct: 411 PDFPLDSQF--PLSSSFSSNTLRPSSPMCCLSDNTSVGIQGARHTQFGISLSDFHLNNKL 468
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMG-NSNQNLEKSENIKKHQFLL 536
Q GL SS Q+ +SR + +T H +SS + S +L G + LE+S+++KKHQFLL
Sbjct: 469 QLGLVPSSFQQIDFHSRISNRSVTDHRDSSSHNSSVLQNGEKTGPKLERSDSVKKHQFLL 528
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
FGQPI TEQQI+ S S D+ S KSSSD + ++VK S GSGST +Q++S KS
Sbjct: 529 FGQPILTEQQITCSSSSDIRSPPTEKSSSDVNLERVKFLSHGSGSTFKQQVSPNKSPGVG 588
Query: 597 FFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS 656
F W + +Q TE GLD GHCKVF+ESEDVGRTL+LSV+SSYEELYRRLA MFG+E+ D+LS
Sbjct: 589 FPWYQGYQATELGLDIGHCKVFMESEDVGRTLNLSVISSYEELYRRLANMFGMEKPDILS 648
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNK 716
HVLYQDA+GA+K+ GD+PFSDF+K+A+RLTIL SGSD +GRT + GMR+ +NGLDASNK
Sbjct: 649 HVLYQDATGAVKQAGDKPFSDFIKTARRLTILTDSGSDKLGRTLMDGMRSGENGLDASNK 708
Query: 717 TGPLSIFA 724
TGPLSIFA
Sbjct: 709 TGPLSIFA 716
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 984 bits (2544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/714 (70%), Positives = 564/714 (78%), Gaps = 31/714 (4%)
Query: 1 MKEVEK-SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFC 59
MKE EK S+DPQLW ACAGSMV IPPLNSTVFYFPQGHAEHS VNFP RIP LI C
Sbjct: 1 MKETEKKSLDPQLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVNFPQ--RIPSLILC 58
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDF-EDNNLSLNSVGSDSESEKPASFAKTLT 118
RV+++KFLAD +TDEVYAKI VP+P ++DF D L N DS +KPASFAKTLT
Sbjct: 59 RVATVKFLADPDTDEVYAKIGFVPLPNTDLDFAHDRGLCGNGNDGDSCPDKPASFAKTLT 118
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY++DPP+QTV+AKDVHGE+WKFRHIYRGTPRRHLL
Sbjct: 119 QSDANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRRHLL 178
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS---GWNSNNGS 235
TTGWSTFVNQKKLVAGDSIVFLRA++GDL VGIRR+K+GIG G+ SS GWNSNN +
Sbjct: 179 TTGWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSNNAT 238
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
C P+ GFS F++E+E RNG M GRVKPE VLEA LA
Sbjct: 239 CAI--PYDGFSLFVKEDE---MRNGGMK---------------GRGRVKPEEVLEAAGLA 278
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
A+GKPF+VVYYPR+STPEFCVKAS+V+AAMR+ W GMRFKMAFETEDSSRISWFMGT++
Sbjct: 279 ANGKPFQVVYYPRSSTPEFCVKASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVT 338
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
SVQVADP+ WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP RKK
Sbjct: 339 SVQVADPVRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKS 398
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
R PQQL FP D QF +P FSGNPLGPSSP+CCLSDNT AGIQGARHAQFGIS SD NN
Sbjct: 399 RFPQQLGFPLDLQFQLPSFSGNPLGPSSPMCCLSDNTPAGIQGARHAQFGISLSDIQFNN 458
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
K QSG+FLSSLQRF P+SR+ + LT HTNS+EN+SCLLTMGNSN NLEKS+N+KKHQFL
Sbjct: 459 KQQSGMFLSSLQRFNPHSRNSETYLTGHTNSNENISCLLTMGNSNPNLEKSDNVKKHQFL 518
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFGQPI EQ ISHSCS D VSQV+ + +S S + SD S ++IS KS +
Sbjct: 519 LFGQPILIEQHISHSCSTDAVSQVINERNSSDESSSKEKISDVLLSAPGKKISQVKSCGT 578
Query: 596 EFFWNRSFQVT-ESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
F W++S T E G DTG CKVFLESEDVG TLDLS L SYEEL+ +LA MFGIERS+M
Sbjct: 579 GFSWHQSLHNTSEIGKDTGPCKVFLESEDVGWTLDLSALCSYEELHGKLANMFGIERSEM 638
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPK 708
SHVLY+DA+G++K+ GDEPFS FMK+AKRLTILM S +W +R K
Sbjct: 639 SSHVLYRDATGSVKQIGDEPFSVFMKTAKRLTILMNQPST---ESWEVRLRGEK 689
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/730 (66%), Positives = 566/730 (77%), Gaps = 35/730 (4%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE EK +DPQLWHACAG MVQ+P +NS VFYFPQGHAEH+ +++ R+PP I C
Sbjct: 1 MKEGEKVLDPQLWHACAGGMVQMPQMNSKVFYFPQGHAEHAHTNIHL----RLPPFILCN 56
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V ++KF+A+ ETDEV+AK+ L+P+ +E+ + + + V S EKPASFAKTLTQS
Sbjct: 57 VEAVKFMANPETDEVFAKLSLLPLRNSELGADSDGAGGDDVAEPSCCEKPASFAKTLTQS 116
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDYTA+PPVQTVVAKDVHGE W+FRHIYRGTPRRHLLTT
Sbjct: 117 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTT 176
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK-----GIGGGNEYPSSGWNSNNGS 235
GWS+FVNQKKLVAGDS+VFLRA++GDLCVGIRRAKK G + SS S NG+
Sbjct: 177 GWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASGSGNGN 236
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
C G P+G FS FL+ EENKM RNG GN G +V+ E V+EAV LA
Sbjct: 237 CGIG-PYGPFSFFLK-EENKMLRNG-----------CGGNLSGR-VKVRAEDVVEAVTLA 282
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
AS KPFEVVYYPRASTPEFCVKASAV+AAMR+ W GMRFKMAFETED+SRISWFMGTI+
Sbjct: 283 ASNKPFEVVYYPRASTPEFCVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIA 342
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
SVQV DPI WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN+P+I+ +PFSP RKKL
Sbjct: 343 SVQVVDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKL 402
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
R PQ DFP D QF +P+FSGN LGP+SPLC SDN AGIQGARHAQFG S SD H+NN
Sbjct: 403 R-PQHPDFPLDVQFPIPMFSGNQLGPNSPLCGFSDNAPAGIQGARHAQFGKSLSDLHLNN 461
Query: 476 KLQSGLFLSSLQRFTPNSRDFDG-ILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQF 534
KLQ G+ +++ + + +G ++T+H S E+LSC LTMG S ++LEKS+++KKHQF
Sbjct: 462 KLQLGMLPTNIHQLGVYNEISNGNMMTNHDKSKESLSCFLTMGKSTKSLEKSDDVKKHQF 521
Query: 535 LLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSS 594
LLFGQPI TEQQIS SCS DV+S K S DK K D S ST Q+ S K+SS
Sbjct: 522 LLFGQPILTEQQIS-SCSGDVLSH--RKRSVSDDKDKAKCLMDDSQSTLSQQFSPGKASS 578
Query: 595 SEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
+EF W + GLDTGHCKVFLESEDVGRTLDLS+ SYE+LYRRLAIMFGIERS++
Sbjct: 579 AEFSW-------QLGLDTGHCKVFLESEDVGRTLDLSLFGSYEDLYRRLAIMFGIERSEI 631
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDAS 714
L+HVLY DA+GA K+TG+EPFSDFMK+AKRLTIL S S ++ R +ITG R ++GLDAS
Sbjct: 632 LNHVLYHDAAGAAKKTGEEPFSDFMKTAKRLTILTDSSSKNIKRAFITGTRNGEHGLDAS 691
Query: 715 NKTGPLSIFA 724
NKTGPLSIFA
Sbjct: 692 NKTGPLSIFA 701
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 943 bits (2437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/727 (65%), Positives = 563/727 (77%), Gaps = 31/727 (4%)
Query: 1 MKEV-EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFC 59
MKEV EK +D QLWHACAG MVQIPP+NS V+YFPQGHAEH+L +V+F + R P LI C
Sbjct: 1 MKEVLEKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILC 60
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV+++KFLAD ETDEVYAKI++VP+ N+ + D++ + +EKP SFAKTLTQ
Sbjct: 61 RVAAVKFLADPETDEVYAKIRVVPV-GNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQ 119
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTV AKDVHGE WKFRHIYRGTPRRHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLT 179
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS+FVNQKKLVAGDSIVFLRA++G+LCVGIRRAK+G GG E PS GWNS G+
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPS-GWNSGAGN---- 234
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+GGFS FLREE M++NGN+ + + + RG G RV+PE V+EA LA+SG+
Sbjct: 235 --YGGFSAFLREE---MSKNGNLT-------SPTRSLRGKG-RVRPESVVEAAYLASSGQ 281
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEVVYYPRA+TPEFCV+AS+V AAMR+ W GMRFKMAFETEDSSRISWFMGTISS+Q+
Sbjct: 282 PFEVVYYPRANTPEFCVRASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQL 341
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADPI WPNSPWRLLQV WDEPDLLQNVK VSPWLVELVSNMPVIHLSPFSP RKKLRLP
Sbjct: 342 ADPIRWPNSPWRLLQVAWDEPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRKKLRLPP 401
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DF D QF +P FSGNPL SSP CCLSDN +AGIQGARHAQFG+ D H++NKL S
Sbjct: 402 --DFSLDSQFQLPSFSGNPLRSSSPFCCLSDNITAGIQGARHAQFGVPLLDLHLSNKLPS 459
Query: 480 GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQ 539
GL S QR NS+ + I + ++N+SCLLTMG S++ L+K++++ +FLLFGQ
Sbjct: 460 GLLPPSFQRVAANSQLPNVINKCQNDRNDNISCLLTMGTSSKTLDKNDSVNTPRFLLFGQ 519
Query: 540 PIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKS-SSSEFF 598
PI TEQQIS+ CS QV+ G + EQ+ SI+ + SS+ FF
Sbjct: 520 PILTEQQISNGCSVS-APQVVQTGKDLGRIQPINEKHPS-----EQKGSIQDNLSSATFF 573
Query: 599 WNRSFQVTESG-LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH 657
WNR + E G L+TGHCKVFLESEDVGRTLDLSV+ SYEELY+RLA MFG+ER DML+
Sbjct: 574 WNRGYHAAELGVLNTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR 633
Query: 658 VLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNKT 717
VLY DA+GA+K TGDEPFSDF+KSAKRLTILM S S+ + R W+TG+ T + GLD+SN+
Sbjct: 634 VLYHDATGAVKHTGDEPFSDFVKSAKRLTILMNSSSN-IKRKWLTGLATAERGLDSSNQA 692
Query: 718 GPLSIFA 724
GPLS FA
Sbjct: 693 GPLSTFA 699
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/727 (66%), Positives = 563/727 (77%), Gaps = 31/727 (4%)
Query: 1 MKEV-EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFC 59
MKEV EK +D QLWHACAG MVQIPP+NS V+YFPQGHAEH+L +V+F + R P LI C
Sbjct: 1 MKEVLEKCVDSQLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPALILC 60
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV+++KFLAD ETDEVYAKI++VP+ N+ + D++ + +EKP SFAKTLTQ
Sbjct: 61 RVAAVKFLADPETDEVYAKIRVVPV-GNKGNDFDDDDDILGSNESGTAEKPNSFAKTLTQ 119
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTV AKDVHGE WKFRHIYRGTPRRHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLT 179
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS+FVNQKKLVAGDSIVFLRA++G+LCVGIRRAK+G GG E PS GWNS G+
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPS-GWNSGAGN---- 234
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+GGFS FLREE M++NGN+ + + + RG G RV+PE V+EA LA+SG+
Sbjct: 235 --YGGFSAFLREE---MSKNGNLT-------SPTRSLRGKG-RVRPESVVEAAHLASSGQ 281
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEVVYYPRA+TPEFCV+AS+V AAMR+ W GMRFKMAFETEDSSRISWFMGTISS+Q+
Sbjct: 282 PFEVVYYPRANTPEFCVRASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQL 341
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADPI WPNSPWRLLQV WDEPDLLQNVK VSPWLVELVSNMPVIHLSPFSP RKKLRLP
Sbjct: 342 ADPIRWPNSPWRLLQVAWDEPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRKKLRLPP 401
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DF D QF +P FSGNPL SSP CCLSDN +AGIQGARHAQFG+ D H +NKL S
Sbjct: 402 --DFSLDSQFQLPSFSGNPLRSSSPFCCLSDNITAGIQGARHAQFGVPLLDLHPSNKLPS 459
Query: 480 GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQ 539
GL S QR NS+ + I + ++N+SCLLTMG S++ L+K++++ +FLLFGQ
Sbjct: 460 GLLPPSFQRVAANSQLPNVINKCQNDRNDNISCLLTMGTSSKTLDKNDSVNTPRFLLFGQ 519
Query: 540 PIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKS-SSSEFF 598
PI TEQQIS+ CS QV+ G + EQ+ SI+ + SS+ FF
Sbjct: 520 PILTEQQISNGCSVS-APQVVQTGKDLGRIQPINEKHPS-----EQKGSIQDNLSSATFF 573
Query: 599 WNRSFQVTESG-LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH 657
WNR + E G L+TGHCKVFLESEDVGRTLDLSV+ SYEELY+RLA MFG+ER DML+
Sbjct: 574 WNRGYHAAELGVLNTGHCKVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLERPDMLTR 633
Query: 658 VLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNKT 717
VLY DA+GA+K TGDEPFSDF+KSAKRLTILM S S+ + R W+TG+ T + GLD+SN+
Sbjct: 634 VLYHDATGAVKHTGDEPFSDFVKSAKRLTILMNSSSN-IKRKWLTGLATAERGLDSSNQA 692
Query: 718 GPLSIFA 724
GPLSIFA
Sbjct: 693 GPLSIFA 699
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 927 bits (2395), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/702 (66%), Positives = 543/702 (77%), Gaps = 20/702 (2%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
KE+EK +D QLWHACAG MVQ+P +N+ VFYFPQGHAEH+ GSV+F + R+PP I CRV
Sbjct: 14 KEMEKCLDSQLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGSVDFRNFPRLPPYILCRV 73
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S +KF+AD ETDEVYAKIKL PI + E ED + + G + + KPASFAKTLTQSD
Sbjct: 74 SGIKFMADPETDEVYAKIKLTPICSKENGMEDEEEGVIN-GGEGQENKPASFAKTLTQSD 132
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE WKFRHIYRGTPRRHLLTTG
Sbjct: 133 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 192
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVN KKLVAGDSIVFLRA++GDLC+GIRRAK+G+GGG P S WN G+CV P
Sbjct: 193 WSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGG---PESSWNPAGGNCVM--P 247
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+GGF+ F RE+ NK++R+GN N N G+VK E V+EA LAA+G+PF
Sbjct: 248 YGGFNSFFREDGNKLSRSGNGN-------GPGENALTGKGKVKAESVIEAATLAANGQPF 300
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS VKAA ++ W GMRFKMAFETEDSSRISWFMGTI+SVQVAD
Sbjct: 301 EVVYYPRASTPEFCVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVAD 360
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
P+ WP+SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP RKKLR+PQ
Sbjct: 361 PLRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKLRMPQHP 420
Query: 422 DFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGL 481
DFP D QF +P FSGN LGP+SP CL DNT AG+QGARHA +G+ SD + NKLQ+ L
Sbjct: 421 DFPLDSQFPLPTFSGNLLGPTSPFGCLPDNTPAGMQGARHAHYGLPLSDLRL-NKLQTSL 479
Query: 482 FLSS----LQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
FL+ L +S +G + SE++SC+LTM S QN K +N+K Q +LF
Sbjct: 480 FLAGFPPPLDHSATHSISSNGPTIVKPSMSESVSCVLTMARSTQNSGKPDNVKTPQLVLF 539
Query: 538 GQPIRTEQQISHSCSDDVVSQVL-GKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
GQPI TEQQIS S S D VS VL G SSS+G+ DK+ SDGSGS Q+ E SS
Sbjct: 540 GQPILTEQQISLSSSGDTVSPVLTGNSSSEGNLDKIANFSDGSGSALHQQGLPEHSSYEG 599
Query: 597 FFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDML 655
F W + + Q TE L+TGHCKVF+ESEDVGRTLDLS+L SY+ELYR+LA MFGIE S+ L
Sbjct: 600 FQWCKGNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIENSETL 659
Query: 656 SHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
++VLY+D +G +K GDEPFSDFMK+A+RLTI+M S SD+VG
Sbjct: 660 NNVLYRDIAGIVKHIGDEPFSDFMKTARRLTIIMDSSSDNVG 701
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/730 (65%), Positives = 561/730 (76%), Gaps = 39/730 (5%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE EK +DPQLWHACAG MVQ+P ++S VFYFPQGHAEH+ +++ R+PP I C
Sbjct: 1 MKEGEKVLDPQLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTIDL----RVPPFILCN 56
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V ++KF+AD ETD+V+AK+ LVP+ +E+ + ++ + + S EKPASFAKTLTQS
Sbjct: 57 VEAVKFMADPETDQVFAKLSLVPLRNSELGPDSDSAAGDDAAEPSSCEKPASFAKTLTQS 116
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLD TA+PPVQTVVAKDVHGE W+FRHIYRGTPRRHLLTT
Sbjct: 117 DANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTT 176
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS+FVNQKKLVAGDS+VFLRA++GDLCVGIRRAKKGI G S +S+ S +G+
Sbjct: 177 GWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEG----SGLASSSVWSSASGS 232
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
G FS FL+ EENKM RNG GN G +V+ E V+EAV LAAS K
Sbjct: 233 GIGPFSFFLK-EENKMLRNG---------CGVGGNLSGR-VKVRAEDVVEAVTLAASNKA 281
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRASTPEFCVKAS+V AAMR+ W GMRFKMAFETED++RISWFMGTI+SVQV
Sbjct: 282 FEVVYYPRASTPEFCVKASSVGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVV 341
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DPI WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN+P+I+ +PFSP RKKLR PQ
Sbjct: 342 DPICWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLR-PQH 400
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHV-NNKLQS 479
DFP D QF +P+ SGN GP+SPLC SDN AGIQGARHAQFG S SD H+ NNKLQ
Sbjct: 401 PDFPLDVQFPIPMLSGNQHGPNSPLCGFSDNAPAGIQGARHAQFGKSLSDLHLNNNKLQL 460
Query: 480 GLFLSSLQRFTPNSRDFDGI-----LTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQF 534
G+ +++ + + GI +T H S E+LSC LTMG S+++LEKS+++KKHQF
Sbjct: 461 GMLPTNIHQL---GGVYTGISSGNMMTKHDKSKESLSCFLTMGKSSKSLEKSDDVKKHQF 517
Query: 535 LLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSS 594
LLFGQPI TEQQIS SCS DV+S+ GK S DK K D S ST Q+ S K+SS
Sbjct: 518 LLFGQPILTEQQIS-SCSRDVLSR--GKRSLGDEKDKAKCVLDDSQSTLSQQFSPGKASS 574
Query: 595 SEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
+EFFW + GLDTGHCKVFLESEDVGRTLDLS SYEELYRRL MFGIERS++
Sbjct: 575 AEFFW-------QLGLDTGHCKVFLESEDVGRTLDLSQFGSYEELYRRLGNMFGIERSEI 627
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDAS 714
L+HVLY DA+GA+K+TG+EPFSDFMK+AKRLTIL SGS ++ R +ITG R ++GLD S
Sbjct: 628 LNHVLYYDAAGAVKQTGEEPFSDFMKTAKRLTILTDSGSKNIKRAFITGTRNGEHGLDPS 687
Query: 715 NKTGPLSIFA 724
NKTGPLSIFA
Sbjct: 688 NKTGPLSIFA 697
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/737 (63%), Positives = 559/737 (75%), Gaps = 50/737 (6%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-RIPPLIFC 59
MKE +KS+DPQLWHACAG MVQ+PP+NS VFYFPQGHAEH+ +V+F ++ IPPLI C
Sbjct: 1 MKETDKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAARIPIPPLILC 60
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-SEKPASFAKTLT 118
V+++KFLAD ETDEV+A++++VP+ +E+D+ED++ G+ +E SEKPASFAKTLT
Sbjct: 61 CVAAVKFLADPETDEVFARLRMVPLRNSELDYEDSD------GNGAEGSEKPASFAKTLT 114
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY+A+PPVQTV+AKDVHGE+WKFRHIYRGTPRRHLL
Sbjct: 115 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLL 174
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS+FVNQKKLVAGDSIVFLRA++GDLCVGIRRAK+G GG E P +S G
Sbjct: 175 TTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPG 234
Query: 239 GNPFG--------GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLE 290
FS FLREE +K+ R+G +V E V E
Sbjct: 235 PGLGLGPGPGPYGAFSGFLREE-SKVVRSGR-------------------PKVSGESVRE 274
Query: 291 AVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
AV LAAS +PFEVVYYPRA+TPEFC++ SAV+ AMR+ W GMRFKM FETEDSSRISWF
Sbjct: 275 AVTLAASNQPFEVVYYPRANTPEFCIRTSAVRGAMRIQWSSGMRFKMPFETEDSSRISWF 334
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
MGTI+SVQ+ DPI WPNSPWRLLQVTWDEPDLL NVKRVSPWLVELVSN+P+IHL+PFSP
Sbjct: 335 MGTIASVQLLDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNVPIIHLAPFSP 394
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGNPLG--PSSPLCCLSDNTSAGIQGARHAQFGISS 468
RKKLR PQ +FP D QF +P FSGNP G SSPLCCLSDN AGIQGARHAQ GIS
Sbjct: 395 PRKKLRFPQHPEFPLDFQFPIPSFSGNPFGSSTSSPLCCLSDNAPAGIQGARHAQIGISL 454
Query: 469 SDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSEN 528
SD H+NNKLQ GL +++ + ++ +G +T+H S E+LSCLLTMGNSN++LEKS++
Sbjct: 455 SDLHLNNKLQLGLLPTNVHQLNLHTGICNGNITNHGKSKESLSCLLTMGNSNKSLEKSDH 514
Query: 529 IKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRIS 588
+K+HQFLLFGQPI TEQQIS S S DV+SQ + + K K S
Sbjct: 515 VKRHQFLLFGQPILTEQQISRS-SSDVLSQNFTVTDDENKEKKEKGFLSDS---QSSVSP 570
Query: 589 IEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFG 648
+ SS++EF W + G DT HCKVF+ESEDVGRTLDLS L SYEELY RLA MFG
Sbjct: 571 GKSSSTTEFSW-------QVGSDTSHCKVFIESEDVGRTLDLSCLGSYEELYMRLANMFG 623
Query: 649 IERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPK 708
IERS+MLSHVLY+DA+GA+K+TG+EPFS+FMK+AKRLTIL S + R WITG+R +
Sbjct: 624 IERSEMLSHVLYRDAAGALKQTGEEPFSEFMKTAKRLTILTDSNNKDSRRVWITGIRNAE 683
Query: 709 NGLD-ASNKTGPLSIFA 724
+GLD ASNKTGPL IFA
Sbjct: 684 HGLDTASNKTGPLGIFA 700
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/707 (66%), Positives = 548/707 (77%), Gaps = 47/707 (6%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
M+ EK +D QLWHACAGSMVQ+P +NS VFYFPQGHAEH+ GSV F +IP LI C+
Sbjct: 1 MRVAEKCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVEF-GHFQIPALIPCK 59
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDF-----EDNNLSLNSVGSDSESEKPASFAK 115
VS++K++AD ETDEVYAKI+L+P+ +++ EDN+ L+S G++S+ EKPASFAK
Sbjct: 60 VSAIKYMADPETDEVYAKIRLIPLNNSDLMLGHGCGEDNDDRLHS-GNESQ-EKPASFAK 117
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQT++AKDVHGE WKFRHIYRGTPRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRR 177
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FVNQKKLVAGDSIVFLRA++GDLCVGIRRAK+GIGG NE SSGWNS
Sbjct: 178 HLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGG-NEC-SSGWNS---- 231
Query: 236 CVTGNPFGGFSCFLREEENK-MARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
F G+S F RE+E+K M RNGN ++ G+VK E V+EA +L
Sbjct: 232 ------FAGYSGFFREDESKLMRRNGNGDMK---------------GKVKAESVIEAASL 270
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
AA+G+PFE VYYPRASTPEFCVKASAV++A+++ W GMRFKMAFETEDSSRISWFMGTI
Sbjct: 271 AANGQPFEAVYYPRASTPEFCVKASAVRSAIQIQWCPGMRFKMAFETEDSSRISWFMGTI 330
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
SSVQVADPI WPNSPWRLLQV WDEPDLL NVKRVSPWLVELVSNMP IHLSPFSP RKK
Sbjct: 331 SSVQVADPIRWPNSPWRLLQVAWDEPDLLHNVKRVSPWLVELVSNMPAIHLSPFSPPRKK 390
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVN 474
LRLPQ DFP GQ MP F+GNPL +SPLCC+SDN AGIQGARHAQFG+SSSD H
Sbjct: 391 LRLPQPPDFPLLGQIPMPSFTGNPLRSNSPLCCVSDNIPAGIQGARHAQFGLSSSDLHF- 449
Query: 475 NKLQSGLFLSSLQRF---TPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKK 531
NKLQ+GLF QR P SR + +T +SE++SCLLTMGNS+Q ++ S+
Sbjct: 450 NKLQAGLFPVDFQRLDRAAPPSRISNSNFVGNTQNSESISCLLTMGNSSQGMKGSDTKTP 509
Query: 532 HQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEK 591
H LLFGQ I T+QQ S SCS D + SSSDGH KA SDGSGS +Q +E
Sbjct: 510 H-ILLFGQLIVTDQQSSQSCSGDTNA----NSSSDGHPG--KAISDGSGSASQQNGPLEN 562
Query: 592 SSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIER 651
SS W + +Q T+ GL+TGHCKVF+ESEDVGRTLDLSVL SYEEL+R+L MFGIE
Sbjct: 563 SSGGRCPWYKDYQKTDPGLETGHCKVFMESEDVGRTLDLSVLGSYEELHRKLVNMFGIES 622
Query: 652 SDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
S+MLS+VLY++A+GA K GDEPFS+F+K+A+RLTIL + SD+VGR
Sbjct: 623 SEMLSNVLYRNAAGATKHAGDEPFSEFLKTARRLTILSDASSDNVGR 669
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/711 (65%), Positives = 539/711 (75%), Gaps = 53/711 (7%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
M+ EK +D QLWHACAGSMVQ+P +NS VFYFPQGHAEH+ GSV+F +IP LI C+
Sbjct: 1 MRVAEKCLDSQLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVDF-GHFQIPALIPCK 59
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE---------SEKPA 111
VS++K++A+ ETDEVYAKI+L P +++ F D G DS+ EKPA
Sbjct: 60 VSAIKYMAEPETDEVYAKIRLTPSSNSDLMFGDG------CGEDSDDRLPNGIESQEKPA 113
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQT++AKDVHGE WKFRHIYRG
Sbjct: 114 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRG 173
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
TPRRHLLTTGWS FVNQKKLVAGDSIVFLRA++GDLCVGIRRAK+GIGGGNE SSGWNS
Sbjct: 174 TPRRHLLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNEC-SSGWNS 232
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMAR-NGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLE 290
FGG+S FLRE+E+K+ R NGN ++ G+VKPE V+E
Sbjct: 233 ----------FGGYSGFLREDESKLTRRNGNGDMK---------------GKVKPESVIE 267
Query: 291 AVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
A +LAA+G+PFEVVYYPRASTPEFCV+ASAV+ AM + W GMRFKMAFETEDSSRISWF
Sbjct: 268 AASLAANGQPFEVVYYPRASTPEFCVRASAVRTAMHIQWCPGMRFKMAFETEDSSRISWF 327
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
MGTISSVQ ADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWL ELVSNMP IHLSPFSP
Sbjct: 328 MGTISSVQFADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLAELVSNMPAIHLSPFSP 387
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSD 470
RKKLRLPQ DFP GQ MP F+G PL +SPLCC+SDN AGIQGARHAQF +SSSD
Sbjct: 388 PRKKLRLPQPPDFPLLGQIPMPSFTGIPLRSNSPLCCVSDNIPAGIQGARHAQFELSSSD 447
Query: 471 FHVNNKLQSGLFLSSLQR---FTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSE 527
H NKLQSGLF QR SR G +T SEN+SCLLTMGNS+Q+L++S
Sbjct: 448 LHF-NKLQSGLFPVDFQRRDHAASPSRISSGNFMGNTKKSENISCLLTMGNSSQSLKESS 506
Query: 528 NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRI 587
K F+LFGQ I T+QQ S SCS D + SSSDG+ KASSDGSGS +Q
Sbjct: 507 ETKTPHFVLFGQLIVTDQQSSQSCSGDTNAN----SSSDGNLG--KASSDGSGSALQQNG 560
Query: 588 SIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
+E SS W + Q T+ GL+T HCKVFLESED+GRTLDLSVL SYEEL+R+LA MF
Sbjct: 561 PMENSSDERSTWYKDHQKTDLGLETDHCKVFLESEDIGRTLDLSVLGSYEELHRKLASMF 620
Query: 648 GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GIE S+MLS+VLY+DA+GA K GDEPFS+F+K+A+RLTIL + D+ GR
Sbjct: 621 GIESSEMLSNVLYRDAAGATKHAGDEPFSEFLKTARRLTILSYASRDNFGR 671
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/704 (66%), Positives = 551/704 (78%), Gaps = 20/704 (2%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+KE ++ +DPQLWHACAG MVQ+PP+N+ VFYFPQGHAEH+ G V+F + R+P I CR
Sbjct: 11 LKEGDRCLDPQLWHACAGGMVQMPPVNAKVFYFPQGHAEHACGPVDFRNCPRVPAHILCR 70
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V+++KF+AD TDEVYAKI+LVP+ E +ED+ + + +KPASFAKTLTQS
Sbjct: 71 VAAIKFMADPGTDEVYAKIRLVPLNGAEAGYEDDGI--GGLNGTETPDKPASFAKTLTQS 128
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 129 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 188
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
G STFVN KKLV+GDSIVFLRA++GDLCVGIRRAK+GIGGG+E SSGWN G+C
Sbjct: 189 GSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSES-SSGWNPMGGNCTV-- 245
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+GGFS FLRE+ENK+ +NG+ N GS NS+G+ G G +V PE V EA LAA+G+P
Sbjct: 246 PYGGFSAFLREDENKLMKNGHGN----GS-NSNGSLMGKG-KVGPESVFEAATLAANGQP 299
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRASTPEFCVKAS VKAA+++ W GMRFKMAFETEDSSRISWFMGTISSVQVA
Sbjct: 300 FEVVYYPRASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVA 359
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
+P+ WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP IHL+PFSP RKK+RLPQ
Sbjct: 360 EPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLTPFSPPRKKMRLPQH 419
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
DFPF+GQ MP FSGN LGPSSP CL D T AG+QGARHA +G+S SD H+ NKL +G
Sbjct: 420 PDFPFEGQLPMPTFSGNLLGPSSPFGCLPDKTPAGMQGARHAHYGLSLSDMHL-NKLHTG 478
Query: 481 LF---LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
LF L S+ + + SENLSCLLTM +S Q +K +++K Q +LF
Sbjct: 479 LFPAGFPPLDHAAAPSKFSNNTMIQKPTMSENLSCLLTMSHSTQTSKKPDDVKPPQLILF 538
Query: 538 GQPIRTEQQISHSCSDDVVSQVL-GKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
GQPI TEQQIS S S D VS VL G SSSDG++DK+ SD SGS +Q I E+SS
Sbjct: 539 GQPILTEQQISLSSSGDTVSPVLTGNSSSDGNADKMANHSDNSGSALQQSIQ-ERSSCEG 597
Query: 597 FFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDML 655
F W + + TE L+TGHCKVF+ESEDVGRTLDLS+L SY+ELYR+LA MFGI+ S+ L
Sbjct: 598 FQWYKDNRHETEPHLETGHCKVFMESEDVGRTLDLSLLGSYDELYRKLADMFGIDNSETL 657
Query: 656 SHVLYQDASGAIKRTGDEPF--SDFMKSAKRLTILMGSGSDSVG 697
+HVLY+D +GA+K GDEPF SDFMK+A+RLTILM GS +VG
Sbjct: 658 NHVLYRDGTGAVKHVGDEPFSCSDFMKTARRLTILMDLGSTNVG 701
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 905 bits (2339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/703 (65%), Positives = 544/703 (77%), Gaps = 22/703 (3%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
KEVE +DPQLWHACAG +VQ+P +NS V+YFPQGHAEH+ G VNF + ++PP + CRV
Sbjct: 12 KEVESCLDPQLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVNFRTCPKVPPFVPCRV 71
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
+++K+ AD ETDEVYAK+KL+P+ AN++D++ + VG +KPASFAKTLTQSD
Sbjct: 72 TAVKYRADPETDEVYAKLKLIPLNANDVDYDRD-----VVGGAETQDKPASFAKTLTQSD 126
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY+ DPPVQ ++AKDVHGE WKFRHIYRGTPRRHLLTTG
Sbjct: 127 ANNGGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTG 186
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVN KKLVAGDSIVFLRA++GDLCVGIRRAKKGI GG E SSGWN G+C P
Sbjct: 187 WSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLET-SSGWNPAGGNCHI--P 243
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+GGFS F RE++N+++RNGN N N S + G G +V+PE V EA LAA+ KPF
Sbjct: 244 YGGFSPFFREDDNRISRNGNSN-----GLNPSVSMMGKG-KVRPEAVSEASNLAANKKPF 297
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V+AA+++ W G+RFKMAFETEDSSRISWFMGTISS QVAD
Sbjct: 298 EVVYYPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQVAD 357
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
P++WPNSPWRLLQVTWDEPDLLQNV+RVSPWLVELVSNMP IH SPFSP RKKLRLPQQ
Sbjct: 358 PLNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLPQQP 417
Query: 422 DFPFDGQFTMPLFSGNPLGPSSP--LCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DFP DGQ + F N LGPS+ CL ++T AG+QGARHA +G+S SD H+ +KLQS
Sbjct: 418 DFPLDGQIPLSTFPSNLLGPSNTNQFGCLLESTPAGMQGARHAHYGLSLSDLHL-SKLQS 476
Query: 480 GLF---LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
GLF SL R + I N SEN+SCLLTM NS Q+ +K + K +L
Sbjct: 477 GLFSTGFPSLDHAATPMRVSNSITLQKPNLSENVSCLLTMANSTQSSKKLDVGKTPSLVL 536
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLGKS-SSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
FGQ I TEQQIS S S D +S VL ++ SSDG+ DKV SDGSGS Q E SS
Sbjct: 537 FGQKILTEQQISPSSSGDTLSPVLTRNCSSDGNVDKVTNFSDGSGSALHQEGLREHSSCE 596
Query: 596 EFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
F W + + Q TE+GL+ GHCKVF+ESEDVGRT+DLS+L SY+EL+R+LA MFGIE+S+M
Sbjct: 597 RFQWCKDNHQETEAGLEIGHCKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEM 656
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
LSHVLY+D++GA+KR DE FSDF ++AKRLTILM SGS++VG
Sbjct: 657 LSHVLYRDSTGAVKRISDESFSDFTRTAKRLTILMDSGSNNVG 699
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/746 (64%), Positives = 558/746 (74%), Gaps = 69/746 (9%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MK EKS+DPQLWHACAG MVQ+P +N+ VFYFPQGHAEH+ +V+F S RIPPLI CR
Sbjct: 57 MKVAEKSLDPQLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNVDFGDSFRIPPLILCR 116
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-SEKPASFAKTLTQ 119
V+S+KFLADSETDEV++KI L+P+ +E++ +D++ G SE SEKPASFAKTLTQ
Sbjct: 117 VASVKFLADSETDEVFSKITLIPLRNSELENDDSD------GDGSENSEKPASFAKTLTQ 170
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+A+PPVQTV+AKDVHGE+WKFRHIYRGTPRRHLLT
Sbjct: 171 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLT 230
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS+FVNQKKLVAGDSIVFLRA+ G+L VGIRRAK+GI G E PS GW+S NG+C G
Sbjct: 231 TGWSSFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPS-GWSSGNGNCGLG 289
Query: 240 NPFGG-FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
P+GG F+ FLREE GN+ +V E V EA+ LAAS
Sbjct: 290 -PYGGAFTAFLREENKLGGVGGNLGGGRV--------------KVSGESVKEAMRLAASN 334
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+ FEVVYYPRASTPEFC+K SAVKAAMR+ W GMRFKM FETEDSSRISWFMGTISSVQ
Sbjct: 335 QTFEVVYYPRASTPEFCIKTSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQ 394
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
V DPI WPNSPWRLLQVTWDEPDLL NVKRVSPWLVELVSNM +IHL+PFSP RKKLR P
Sbjct: 395 VVDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPRKKLRFP 454
Query: 419 QQLDFPFD-GQFTMPLFSGNPLGPSSPLCCL--SDNT---SAGIQGARHAQFGISSSDFH 472
Q DFP D QF +P FSGNP +PLCCL SDN +AGIQGARHAQ GIS SD H
Sbjct: 455 QHPDFPLDVVQFQIPTFSGNPF---NPLCCLSSSDNYNAPAAGIQGARHAQIGISLSDLH 511
Query: 473 V-NNKLQSGLFLSSLQRFTPNSRD----FDGILTSHTN-SSENLSCLLTMGNSNQ---NL 523
+ NNK Q G+F PN+R+ I T+H N S E++SCLLT+GNS++ +
Sbjct: 512 LNNNKFQLGVF--------PNNRETISNVSNITTNHDNKSKESISCLLTIGNSHKRSLEI 563
Query: 524 EKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVK-ASSDGSGST 582
+ N +HQFLLFGQPI TEQQIS S D V +L K DK K SD + S+
Sbjct: 564 KSDNNDNRHQFLLFGQPILTEQQISRKDSSDDV--LLSKK-----KDKEKWFFSDTTQSS 616
Query: 583 HEQRISIEKSS----SSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
++ S KSS S++F W + GLDTGHCKVFLESEDVGRTLDLS + SYEE
Sbjct: 617 ISEQFSPAKSSTTSASADFCW-------QLGLDTGHCKVFLESEDVGRTLDLSCVGSYEE 669
Query: 639 LYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
LYR+LA MFGIERS+MLS VLY+DA+GA+K+TG+EPFSDFMK+AKRLTILM SGS R
Sbjct: 670 LYRKLAKMFGIERSEMLSRVLYRDATGAVKQTGEEPFSDFMKTAKRLTILMDSGSKDTRR 729
Query: 699 TWITGMRTPKNGLDASNKTGPLSIFA 724
ITG R + GLDASNKTGP+SIF
Sbjct: 730 VCITGTRNAERGLDASNKTGPMSIFV 755
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 888 bits (2295), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/703 (63%), Positives = 535/703 (76%), Gaps = 22/703 (3%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+KEVEK +DPQLWHACAG MVQ+PP+N+ VFYFPQGHAEHS V+F + ++P CR
Sbjct: 11 LKEVEKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDFRNCPKVPSYTLCR 70
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLS-LNSVGSDSESEKPASFAKTLTQ 119
VS++KFLAD +TDEV+AK++L+PI +E+DFED+ + LN SE +KP SFAKTLTQ
Sbjct: 71 VSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNG----SEQDKPTSFAKTLTQ 126
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE WKFRHIYRGTPRRHLLT
Sbjct: 127 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 186
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFVN KKLVAGDSIVFLRA++GDLCVGIRRAK+GIG G E S GWN G+C
Sbjct: 187 TGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPES-SCGWNPAGGNCAVS 245
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+G FS FLRE++N++ R+ N N +G+ G G +VKPE V EA LA++G+
Sbjct: 246 --YGAFSAFLREDDNRLTRSAN-------GMNGNGSLMGKG-KVKPESVTEAAKLASNGQ 295
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFE+++YPRASTPEFCVKA+ VKAA+++ W GMRFKMAFETEDSSRISWFMGTI+SVQV
Sbjct: 296 PFEIIFYPRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQV 355
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+DP+ WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+M IHL+PFSP RKK R PQ
Sbjct: 356 SDPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQ 415
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DFP D Q +P FS G SP C DN AG+QGARHA FG+S SDFHV +KLQS
Sbjct: 416 HPDFPLDNQPPVPSFSSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHV-SKLQS 474
Query: 480 GLFLSSLQRFTP---NSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
GLF + P ++R ++T + SEN+SCLLTM +S Q +K + +K Q +L
Sbjct: 475 GLFSIGYRSLDPAAGSTRLSGNVMTEKPSMSENVSCLLTMAHSTQASKKFDGVKTPQLIL 534
Query: 537 FGQPIRTEQQISHSCSDDVVSQV-LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
FG+PI TE Q+S S S D VS V G SSSDG+ DK+ SDGSGS Q+ E S+
Sbjct: 535 FGRPILTELQMSQSFSGDTVSPVGTGNSSSDGNGDKMTNLSDGSGSALHQQGLPEGSAGE 594
Query: 596 EFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
F W + + Q + LD GHCKVF+ESEDVGRTLDLS L SYEELYR+L MFGI+ S+
Sbjct: 595 NFQWYKDNCQEIDPNLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGIDNSET 654
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
L+HVLY+D SGA+K GDE FSDF+K+A+RLTIL SGS++VG
Sbjct: 655 LNHVLYRDVSGAVKHVGDEQFSDFIKTARRLTILTDSGSNNVG 697
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/698 (64%), Positives = 531/698 (76%), Gaps = 29/698 (4%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE++K +DPQLWHACAG MV +P LNS V YFPQGHAEH+ G+V+F + RIPPL+ CR
Sbjct: 8 MKELDKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-GNPRIPPLVLCR 66
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
VS++K+LAD E+DEVYAKI+L+P+ E + ED+ L + G ++ EKPASFAKTLTQS
Sbjct: 67 VSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVL-MGGNGIEA-PEKPASFAKTLTQS 124
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE W+FRHIYRGTPRRHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 184
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+K LVAGDSIVFLRA++GDLCVGIRRAK+ G G E PS GWN +G+ +
Sbjct: 185 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRA-GCGPESPS-GWNPASGNGTS-- 240
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+ G+S FLRE+EN+ +S+ RG G RV+ E V EA LAA+G+P
Sbjct: 241 PYRGYSGFLREDENRPILT-----------HSNAGFRGKG-RVRAESVAEAATLAANGQP 288
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F +VYYPRASTPEFCVKAS+V+AAM++ W GM+FKMAFET+DSSRISWFMG ISSV V
Sbjct: 289 FVIVYYPRASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVN 348
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DPI WPNSPWRLLQVTWDEPDLLQNVKRV+PWLVELVS++P IHLSPFSP RKKLRL QQ
Sbjct: 349 DPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVELVSHVPSIHLSPFSPPRKKLRLQQQ 408
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
+FP GQ MP FS N L PSSPLCC+SDN AGIQGARHAQFG+SSSD H NKLQ G
Sbjct: 409 SEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGARHAQFGLSSSDLHF-NKLQLG 467
Query: 481 LFLSSLQ----RFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
LF LQ + P S G S+ ++EN+SCLLT+GNS QN +K+ IK F L
Sbjct: 468 LFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFL 527
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
FGQPI EQQ+S SCS D G SSSDG+ +K SDGSGS Q E SS
Sbjct: 528 FGQPILIEQQVSQSCSGDTA----GISSSDGNPEKTPNFSDGSGSAFHQNGPQESSSDEG 583
Query: 597 FF-WNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDML 655
W + Q T GL+TGHCKVF+ESEDVGRTLDLS+L SYEELYR+LA MFGIER++ML
Sbjct: 584 LLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIERAEML 643
Query: 656 SHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGS 693
S+VLY+D +G +K GD PF +F+K+A+RLTIL S +
Sbjct: 644 SNVLYRDEAGIVKHIGDAPFGEFLKTARRLTILADSAA 681
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 882 bits (2279), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/703 (65%), Positives = 540/703 (76%), Gaps = 24/703 (3%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
KE K ++PQLWHACAG MVQ+PP+NS VFYFPQGHAEH+ SV+F + RIP I CRV
Sbjct: 12 KEAGKCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRV 71
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES-EKPASFAKTLTQS 120
S++KF+AD E+DEVYAKI LVP+ +E D++D+ G+ +ES EKPASFAKTLTQS
Sbjct: 72 SAMKFMADPESDEVYAKITLVPLNGSESDYDDDGY-----GNGTESQEKPASFAKTLTQS 126
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDYTADPPVQ ++AKDVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 127 DANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTT 186
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFVN KKL+AGDSIVFLRA++GDLCVGIRRAK+GIG G E SSGWN C
Sbjct: 187 GWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPE-SSSGWNP--AGCNYVM 243
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+GGFS FLRE+ENK+ RNGN + S + +V E V+EAV LA +G+P
Sbjct: 244 PYGGFSAFLREDENKLTRNGNGGSSG------SNGSFFGRVKVTAEAVIEAVRLAVNGQP 297
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEV+YYPRASTPEFCVK+S VK+A ++ W GMRFKMAFETEDSSRISWFMGTISSVQVA
Sbjct: 298 FEVIYYPRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 357
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DP+ WP+SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP IHL+ FSP RKKLR PQ
Sbjct: 358 DPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPSIHLTHFSPPRKKLRFPQY 417
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
DFP D QF+MP FS N +GPS+P CLSDN AG+QGARHAQ+G+S SD H +NK QSG
Sbjct: 418 PDFPLDAQFSMPTFSSNLVGPSNPFGCLSDNIPAGMQGARHAQYGLSLSDPH-HNKFQSG 476
Query: 481 LFLSSLQRF----TPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
LF + + TP D ++ +SSEN+S LLT+ S + +KS++ +K F L
Sbjct: 477 LFPAPFPQLDHPATPPKASND-YVSRKRSSSENVSSLLTIAQSTETSKKSDD-RKTGFTL 534
Query: 537 FGQPIRTEQQISHSCSDDVVSQVL-GKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
FG+ I TEQQ+S SCS D VS V+ G SSS+G+ DK+ SDGSGS Q E SS
Sbjct: 535 FGRSILTEQQMSQSCSGDTVSPVITGNSSSEGNQDKMANFSDGSGSALHQHGLPEHSSCE 594
Query: 596 EF-FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
+ + + + TE L+TGHCKVF+ESEDVGRTLDLS+L+SY+EL +LA MF IE S+M
Sbjct: 595 GYQTYKVNHRETEPNLETGHCKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIEDSEM 654
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
+HVLY+DA+GA+K GDEPFSDF K+AKRLTILM S SD+VG
Sbjct: 655 RNHVLYRDATGAVKHIGDEPFSDFTKTAKRLTILMDSSSDNVG 697
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 872 bits (2254), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/678 (68%), Positives = 537/678 (79%), Gaps = 38/678 (5%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
KE EKS+DPQLWHACAGSMVQIPP+NS VFYFPQGHAEHSL V+F SS IP L+ CRV
Sbjct: 3 KEAEKSLDPQLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPVDFSSSPPIPALLLCRV 62
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
+S+KFLAD+ETDEVYAKI LVP+P E D E++ ++ GSD+ EKPASFAKTLTQSD
Sbjct: 63 ASVKFLADAETDEVYAKIMLVPLPNTEPDLEND--AVFGGGSDN-VEKPASFAKTLTQSD 119
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTADPPVQTV+A+DVHGEIWKFRHIYRGTPRRHLLTTG
Sbjct: 120 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHLLTTG 179
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS+FVN KKLVAGDSIVFLRA++G+LCVGIRRAK+G G E SG NG+ V+ P
Sbjct: 180 WSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAE---SGLG--NGNDVS--P 232
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+GGFS FL+E+E+K+ R + RG G +V+ E V+EAVALAA+G+PF
Sbjct: 233 YGGFSGFLKEDESKITRKRS--------------PRGKG-KVRAEAVVEAVALAANGQPF 277
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
E+VYYPRASTPEFCVKASAV+AAMRV W MRFKMAFETED SRISWFMGT+SSV +AD
Sbjct: 278 EIVYYPRASTPEFCVKASAVRAAMRVPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIAD 337
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA--RKKLRLPQ 419
P+ WPNSPWRLLQVTWDEPDLLQNV+RVSPWLVELV NM +HLSPFS RKKLRLP+
Sbjct: 338 PLRWPNSPWRLLQVTWDEPDLLQNVERVSPWLVELVPNMLPVHLSPFSTVTPRKKLRLPK 397
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
LDFP QF MP FSG+PL S+PL CLSDN AGIQGARHAQF +SSSD H+ NKL+S
Sbjct: 398 HLDFPLVEQFPMPPFSGHPLRSSNPLRCLSDNAPAGIQGARHAQFRLSSSDPHL-NKLKS 456
Query: 480 GLFLSSLQRFTPNSRDFDGI-LTSHTNSS-ENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
GLF S Q F P +R +GI +T HT+S+ +NLSCLLT+GNS+ +KSEN K+HQFLLF
Sbjct: 457 GLFPSGFQLFDPQARVPNGISMTKHTDSNDDNLSCLLTVGNSSPK-KKSENGKRHQFLLF 515
Query: 538 GQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEF 597
GQPI TEQQ+S SCS V + + + DK K S+GS S E ++S EKS ++
Sbjct: 516 GQPILTEQQLSRSCSTGVKTAL-------ENEDKRKDYSNGSESALENQLSPEKSFTTRL 568
Query: 598 FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH 657
W + +Q E G TGHCKVFLESEDVGRTLDL+VL SYEELY RLA MFG ERS+ML H
Sbjct: 569 LWQQDYQAPEPGSATGHCKVFLESEDVGRTLDLTVLGSYEELYMRLANMFGRERSEMLGH 628
Query: 658 VLYQDASGAIKRTGDEPF 675
VLY+DA+GA+K+TGDEPF
Sbjct: 629 VLYRDATGAVKQTGDEPF 646
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 858 bits (2217), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/681 (63%), Positives = 515/681 (75%), Gaps = 22/681 (3%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+KEVEK +DPQLWHACAG MVQ+PP+N+ VFYFPQGHAEHS V+F + ++P CR
Sbjct: 11 LKEVEKCLDPQLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDFRNCPKVPSYTLCR 70
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLS-LNSVGSDSESEKPASFAKTLTQ 119
VS++KFLAD +TDEV+AK++L+PI +E+DFED+ + LN SE +KP SFAKTLTQ
Sbjct: 71 VSAIKFLADPDTDEVFAKLRLIPINGSELDFEDDGIGRLNG----SEQDKPTSFAKTLTQ 126
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE WKFRHIYRGTPRRHLLT
Sbjct: 127 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 186
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFVN KKLVAGDSIVFLRA++GDLCVGIRRAK+GIG G E S GWN G+C
Sbjct: 187 TGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPES-SCGWNPAGGNCAVS 245
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+G FS FLRE++N++ R+ N N +G+ G G +VKPE V EA LA++G+
Sbjct: 246 --YGAFSAFLREDDNRLTRSAN-------GMNGNGSLMGKG-KVKPESVTEAAKLASNGQ 295
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFE+++YPRASTPEFCVKA+ VKAA+++ W GMRFKMAFETEDSSRISWFMGTI+SVQV
Sbjct: 296 PFEIIFYPRASTPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQV 355
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+DP+ WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+M IHL+PFSP RKK R PQ
Sbjct: 356 SDPLRWPESPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQ 415
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DFP D Q +P FS G SP C DN AG+QGARHA FG+S SDFHV +KLQS
Sbjct: 416 HPDFPLDNQPPVPSFSSYLHGTGSPFGCPPDNNPAGMQGARHAHFGLSLSDFHV-SKLQS 474
Query: 480 GLFLSSLQRFTP---NSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
GLF + P ++R ++T + SEN+SCLLTM +S Q +K + +K Q +L
Sbjct: 475 GLFSIGYRSLDPAAGSTRLSGNVMTEKPSMSENVSCLLTMAHSTQASKKFDGVKTPQLIL 534
Query: 537 FGQPIRTEQQISHSCSDDVVSQV-LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
FG+PI TE Q+S S S D VS V G SSSDG+ DK+ SDGSGS Q+ E S+
Sbjct: 535 FGRPILTELQMSQSFSGDTVSPVGTGNSSSDGNGDKMTNLSDGSGSALHQQGLPEGSAGE 594
Query: 596 EFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
F W + + Q + LD GHCKVF+ESEDVGRTLDLS L SYEELYR+L MFGI+ S+
Sbjct: 595 NFQWYKDNRQEIDPNLDIGHCKVFMESEDVGRTLDLSSLGSYEELYRKLGNMFGIDNSET 654
Query: 655 LSHVLYQDASGAIKRTGDEPF 675
L+HVLY+D SGA+K GDE F
Sbjct: 655 LNHVLYRDVSGAVKHVGDEQF 675
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/703 (62%), Positives = 517/703 (73%), Gaps = 52/703 (7%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE++K +DPQLWHACAG MV +P LNS V YFPQGHAEH+ G+V+F + RIPPL+ CR
Sbjct: 1 MKELDKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-GNPRIPPLVLCR 59
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
VS++K+LAD E+DEVYAKI+L+P+ E + ED+ L + G ++ EKPASFAKTLTQS
Sbjct: 60 VSAVKYLADPESDEVYAKIRLIPLRNTEGETEDDVL-MGGNGIEA-PEKPASFAKTLTQS 117
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQT++AKDVHGE W+FRHIYRGTPRRHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 177
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+K LVAGDSIVFLRA++GDLCVGIRRAK+ G G E P SGWN +G+ +
Sbjct: 178 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRA-GCGPESP-SGWNPASGNGTS-- 233
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+ G+S FLRE+EN+ +S+ RG GRV+ E V EA LAA+G+P
Sbjct: 234 PYRGYSGFLREDENRPILT-----------HSNAGFRGK-GRVRAESVAEAATLAANGQP 281
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F +VYYPRASTPEFCVKAS+V+AAM++ W GM+FKMAFET+DSSRISWFMG ISSV V
Sbjct: 282 FVIVYYPRASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVN 341
Query: 361 DPISWPNSPWRL-----------------------LQVTWDEPDLLQNVKRVSPWLVELV 397
DPI WPNSPWRL LQVTWDEPDLLQNVKRV+PWLVELV
Sbjct: 342 DPIRWPNSPWRLLQVLEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVELV 401
Query: 398 SNMPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQ 457
S++P IHLSPFSP RKKLRL QQ +FP GQ MP FS N L PSSPLCC+SDN AGIQ
Sbjct: 402 SHVPSIHLSPFSPPRKKLRLQQQSEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQ 461
Query: 458 GARHAQFGISSSDFHVNNKLQSGLFLSSLQ----RFTPNSRDFDGILTSHTNSSENLSCL 513
GARHAQFG+SSSD H NKLQ GLF LQ + P S G S+ ++EN+SCL
Sbjct: 462 GARHAQFGLSSSDLHF-NKLQLGLFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCL 520
Query: 514 LTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVK 573
LT+GNS QN +K+ IK F LFGQPI EQQ+S SCS D G SSSDG+ +K
Sbjct: 521 LTIGNSTQNSKKNNEIKAPYFFLFGQPILIEQQVSQSCSGDTA----GISSSDGNPEKTP 576
Query: 574 ASSDGSGSTHEQRISIEKSSSSEFF-WNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
SDGSGS Q E SS W + Q T GL+TGHCKVF+ESEDVGRTLDLS+
Sbjct: 577 NFSDGSGSAFHQNGPQESSSDEGLLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSI 636
Query: 633 LSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPF 675
L SYEELYR+LA MFGIER++MLS+VLY+D +G +K GD PF
Sbjct: 637 LGSYEELYRKLANMFGIERAEMLSNVLYRDEAGIVKHIGDAPF 679
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/707 (61%), Positives = 521/707 (73%), Gaps = 26/707 (3%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
+E +K +D QLWHACAG MVQ+P +NS VFYFPQGHAEH+ V+F + R+ + CRV
Sbjct: 13 EEADKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVDFRNLPRVSHNL-CRV 71
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNS-VGSDSESEKPASFAKTLTQS 120
S +KF+AD ETDEV+AKI+LVPI +NE+D +D +++N + + ++ KP SFAKTLTQS
Sbjct: 72 SDIKFMADPETDEVFAKIRLVPINSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKTLTQS 131
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAE IFPRLDYTADPPVQT++AKDVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 132 DANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLTT 191
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN KKL+AGDS+VF RA++GDLCVG+RRAK+ GGG P S WN GS
Sbjct: 192 GWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGG---PESLWNPAGGSSAV-- 246
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P GGF FLRE+E+K+ R+ + N G+ + S + G+V+ E V++AV LAA+G P
Sbjct: 247 PSGGFGAFLREDEHKLMRSASGN----GNGSKSNESLMGQGKVRAESVIQAVTLAANGLP 302
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRA+TPEFCVKAS VK AM++ W GMRFKMAFETEDSSRISWFMGT+ SVQ A
Sbjct: 303 FEVVYYPRANTPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAA 362
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
D + WP+SPWRLLQVTWDEPDLLQNVKRVSPWLVEL SNM IH PFS RKKLRLPQ
Sbjct: 363 DSLWWPHSPWRLLQVTWDEPDLLQNVKRVSPWLVELASNMAAIHFPPFSSPRKKLRLPQH 422
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
LDFP DGQF MP+FSGN LGPSS L NT AG+QGARHA +G+ SD H+ NKLQ+G
Sbjct: 423 LDFPIDGQFPMPIFSGNLLGPSSSFDFLPHNTPAGMQGARHAHYGLPLSDPHL-NKLQTG 481
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTNSS--------ENLSCLLTMGNSNQNLEKSENIKKH 532
L + P D LT +N E++SC LTM +S Q +K+ ++K
Sbjct: 482 LLRTGF----PPLLDHTASLTKASNVQTIPKPSMCEDVSCELTMAHSTQTSKKAVDVKIP 537
Query: 533 QFLLFGQPIRTEQQISHSCSDDVVSQVL-GKSSSDGHSDKVKASSDGSGSTHEQRISIEK 591
Q +LFGQPI EQQIS SC + S VL G SSS+G+ DK+ SDGS ST +R E
Sbjct: 538 QLVLFGQPILAEQQISLSCPGNAASPVLTGNSSSEGNLDKMANFSDGSVSTLHRRGLPEC 597
Query: 592 SSSSEFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE 650
SS E WN+ Q +E L+TGHCKVF++SEDVGRTLDLS+L SYEELYR+LA MFG+
Sbjct: 598 SSCEELQWNKDKHQKSEPSLETGHCKVFMDSEDVGRTLDLSLLGSYEELYRKLANMFGLR 657
Query: 651 RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
S+ S+VLY+D +G K G+EPFSDF K+A+RLTI+ S S +VG
Sbjct: 658 NSEKFSNVLYRDINGITKHIGEEPFSDFFKTARRLTIVTDSSSGNVG 704
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/732 (61%), Positives = 536/732 (73%), Gaps = 70/732 (9%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-RIPPLIFC 59
MKE +KS+DPQLWHACAG MVQ+PP+NS VFYFPQGHAEH+ +V+F ++ IPPLI C
Sbjct: 1 MKETDKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAARIPIPPLILC 60
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV+++KFLAD ETDEV+A+++LVP+ +E+D+ED++ + G SEKPASFAKTLTQ
Sbjct: 61 RVAAVKFLADPETDEVFARLRLVPLRNSELDYEDSDAN----GEAEGSEKPASFAKTLTQ 116
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+A+PPVQTV+A+DVHGE+WKFRHIYRGTPRRHLLT
Sbjct: 117 SDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLT 176
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS+FVNQKKLVAGDSIVFLRA++GDLCVGIRRAK+G GG E P +S +
Sbjct: 177 TGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGW-SSYGSGGLGL 235
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
P+G FS F+REE + +V E V EAV LAAS +
Sbjct: 236 GPYGAFSGFMREESGR-------------------------AKVSGESVREAVTLAASNQ 270
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
FEVVYYPRA+TPEFC++ SAV+ AMR+ W GMRFKM FETEDSSRISWFMGTI+SVQV
Sbjct: 271 AFEVVYYPRANTPEFCIRTSAVRGAMRIQWCSGMRFKMPFETEDSSRISWFMGTIASVQV 330
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DPI WPNSPWRLLQV+WDEPDLL NVKRVSPWLVELVSN+P+IHL+ FSP RKKLR
Sbjct: 331 LDPIRWPNSPWRLLQVSWDEPDLLHNVKRVSPWLVELVSNVPIIHLAAFSPPRKKLR--- 387
Query: 420 QLDFPFDGQFTMPLF---SGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNK 476
FP D QF +P F SSP CCLSDN AGIQGARH+Q GIS SD H+NNK
Sbjct: 388 ---FPLDVQFPIPSFSGNPFGSSSSSSPFCCLSDNAPAGIQGARHSQIGISLSDLHLNNK 444
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
LQ GL + + + ++ GI S+ S E+LS LL+MGNSN LEKS+++K+H FLL
Sbjct: 445 LQLGLLPTKVHQLNLHA----GI--SNAKSKESLSSLLSMGNSNMTLEKSDHVKRHHFLL 498
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEK---SS 593
FGQPI TEQQIS +SSSD +D G + + S+ SS
Sbjct: 499 FGQPILTEQQIS-------------RSSSDVATDDENKEKKKKGFLSDSQSSVSPGNLSS 545
Query: 594 SSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSD 653
++EF W + G DT HCKVF+ESEDVGRTLDLS LSSY+ELY RLA MFGIERSD
Sbjct: 546 TAEFSW-------QLGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIERSD 598
Query: 654 MLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLD- 712
MLSHVLY D+SGA+K+ G+EPFS+FMK+AKRLTIL S + R WITG R ++GLD
Sbjct: 599 MLSHVLYCDSSGALKQIGEEPFSEFMKTAKRLTILTDSNNKDSRRVWITGTRNAEHGLDA 658
Query: 713 ASNKTGPLSIFA 724
ASNKTGPLSIFA
Sbjct: 659 ASNKTGPLSIFA 670
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/709 (60%), Positives = 519/709 (73%), Gaps = 34/709 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS--VNFPSSSRIPPLIFC 59
+E +K +DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G V FP R+P L+ C
Sbjct: 14 RESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGG-RVPALVLC 72
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS--ESEKPASFAKTL 117
RV+ ++F+AD +TDEV+AKI+LVP+ ANE + + + + + EKPASFAKTL
Sbjct: 73 RVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
TQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHL
Sbjct: 133 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWSTFVNQKKLVAGDSIVF+R ++GDLCVGIRRAKKG GG E+
Sbjct: 193 LTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAA 252
Query: 238 TGNPFGGFSCFLREEE--NKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
GN +GGFS FLR ++ NKMA + G R RV+PE V+EA LA
Sbjct: 253 GGN-YGGFSMFLRGDDDGNKMAAA------------ARGKVRA---RVRPEEVVEAANLA 296
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
SG+PFEVVYYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT+S
Sbjct: 297 VSGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVS 356
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
+VQVADPI WPNSPWRLLQV+WDEPDLLQNVKRVSPWLVELVSNMP IHL+PFSP RKKL
Sbjct: 357 AVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKL 416
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSSDFHVN 474
+P + P DGQF P+F GNPL P+C D T AGIQGARHAQFGIS SD H+
Sbjct: 417 CVPLYPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHL- 475
Query: 475 NKLQSGLFLSSLQRFTP--NSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKK- 531
NKLQS L L + R G++ H + +++SCLLT+G S QN +KS+ K
Sbjct: 476 NKLQSSLSPHGLHQLDHGMQPRIAAGLIIGHPAARDDISCLLTIG-SPQNNKKSDGKKAP 534
Query: 532 HQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV--KASSDGSGSTHEQRISI 589
Q +LFG+PI TEQQIS D S + KSSSDG+++ K++SD S Q +
Sbjct: 535 AQLMLFGKPILTEQQISLG---DAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTT 591
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI 649
+ S + +V + GL+TGHCKVF++SEDVGRTLDLSV+ SYEELYRRLA MFGI
Sbjct: 592 DNLSCGGVPLCQDNKVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGI 651
Query: 650 ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
E+++++SHV Y+DA+GA+K TGDEPFS+F K+A+RL IL + D++ R
Sbjct: 652 EKAELMSHVFYRDAAGALKHTGDEPFSEFTKTARRLNILTDTSGDNLAR 700
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/709 (60%), Positives = 518/709 (73%), Gaps = 34/709 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS--VNFPSSSRIPPLIFC 59
+E +K +DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G V FP R+P L+ C
Sbjct: 14 RESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFPGG-RVPALVLC 72
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS--ESEKPASFAKTL 117
RV+ ++F+AD +TDEV+AKI+LVP+ ANE + + + + + EKPASFAKTL
Sbjct: 73 RVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
TQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHL
Sbjct: 133 TQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWSTFVNQKKLVAGDSIVF+R ++GDLCVGIRRAKKG GG E+
Sbjct: 193 LTTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAA 252
Query: 238 TGNPFGGFSCFLREEE--NKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
GN +GGFS FLR ++ NKMA + G R RV+PE V+EA LA
Sbjct: 253 GGN-YGGFSMFLRGDDDGNKMAAA------------ARGKVRA---RVRPEEVVEAANLA 296
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
SG+PFEVVYYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT+S
Sbjct: 297 VSGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVS 356
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
+VQVADPI WPNSPWRLLQV+WDEPDLLQNVKRVSPWLVELVSNMP IHL+PFSP RKKL
Sbjct: 357 AVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKL 416
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSSDFHVN 474
+P + P DGQF P+F GNPL P+C D T AGIQGARHAQFGIS SD H+
Sbjct: 417 CVPLYPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHL- 475
Query: 475 NKLQSGLFLSSLQRFTP--NSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKK- 531
NKLQS L + R G++ H + +++SCLLT+G S QN +KS+ K
Sbjct: 476 NKLQSSLSPHGFHQLDHGMQPRIAAGLIIGHPAARDDISCLLTIG-SPQNNKKSDGKKAP 534
Query: 532 HQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV--KASSDGSGSTHEQRISI 589
Q +LFG+PI TEQQIS D S + KSSSDG+++ K++SD S Q +
Sbjct: 535 AQLMLFGKPILTEQQISLG---DAASVDVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTT 591
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI 649
+ S + +V + GL+TGHCKVF++SEDVGRTLDLSV+ SYEELYRRLA MFGI
Sbjct: 592 DNLSCGGVPLCQDNKVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFGI 651
Query: 650 ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
E+++++SHV Y+DA+GA+K TGDEPFS+F K+A+RL IL + D++ R
Sbjct: 652 EKAELMSHVFYRDAAGALKHTGDEPFSEFTKTARRLNILTDTSGDNLAR 700
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 828 bits (2140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/700 (60%), Positives = 514/700 (73%), Gaps = 67/700 (9%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+KEVE+ +DPQLWHACAG MVQ+P +N+ V+YFPQGHAEH+ G VNF + ++PP + CR
Sbjct: 11 LKEVERCLDPQLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTCPKVPPFVPCR 70
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V ++K++AD ETDEVYAK+KLVP+ AN++D++ + +G+++ +KPASFAKTLTQS
Sbjct: 71 VVAVKYMADPETDEVYAKLKLVPLNANDVDYDHD-----VIGAETR-DKPASFAKTLTQS 124
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQ ++AKDVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTT 184
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFVN KKLVAGDSIVFLRA++GDLCVGIRRAKKGIGGG E SSGWN G+
Sbjct: 185 GWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLET-SSGWNPAGGNFPM-- 241
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P+ GFS FLRE++N++ RNGN N N S + G G +V+PE ++EA LAA+ KP
Sbjct: 242 PYSGFSPFLREDDNRILRNGNSN-----GLNPSVSMMGKG-KVRPEAIIEAANLAANKKP 295
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRASTPEFCVKAS V+AAM+ W G+RFKMAFETEDSSRISWFMGTISSVQVA
Sbjct: 296 FEVVYYPRASTPEFCVKASLVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVA 355
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DP++WPNSPWRLLQVTWDEPDLLQNV+RVSPWLVELVSNMP IH SPFSP RKKLRLPQ
Sbjct: 356 DPLNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLPQH 415
Query: 421 LDFPFDGQFTMPLFSGNPLGP--SSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQ 478
DFP DGQ +P N LGP ++ CL ++T AG+QGARHA +G+S SD H+ +KLQ
Sbjct: 416 PDFPLDGQIPLPTLPNNLLGPNNTNQFGCLLESTPAGMQGARHAHYGLSLSDLHL-SKLQ 474
Query: 479 SGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFG 538
SGL S F P + ++S + LS +LT
Sbjct: 475 SGL---SSAGFPPLDHAATPMKICPSSSVDTLSPVLT----------------------- 508
Query: 539 QPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFF 598
+C S+DG+ +KV DG GS Q+ E SS F
Sbjct: 509 ----------RNC------------STDGNVNKVTNFFDGFGSALHQQGLHEHSSCERFQ 546
Query: 599 WNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH 657
W + + Q E+ ++TGHCKVF+ESEDVGRT+DLS+L SY+EL+R+LA MFGIE+S+MLS
Sbjct: 547 WCKDNHQEIEANMETGHCKVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLSR 606
Query: 658 VLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
VLY D+ GAIK GDEPFSDF ++AKRLTILM SGS++VG
Sbjct: 607 VLYCDSVGAIKHIGDEPFSDFTRTAKRLTILMDSGSNNVG 646
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/712 (59%), Positives = 523/712 (73%), Gaps = 46/712 (6%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+KEVEK +D +LWHACAG MVQ+P +N+ VFYFPQGHAEH+ G V+F +IPP I C+
Sbjct: 7 LKEVEKCLDSRLWHACAGGMVQMPVVNAKVFYFPQGHAEHACGPVDFRVYPKIPPFIQCK 66
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V ++K++AD ETDEVY K++LVP+ NE DFED+ ++ + +K SFAKTLTQS
Sbjct: 67 VGAIKYMADPETDEVYVKLRLVPLTRNEGDFEDD--AVGGINGSENKDKSPSFAKTLTQS 124
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDY+ADPPVQ ++AKDVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTT 184
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK--GIGGGNEYPSSGWNSNNGSCVT 238
GWS+FVN KKLVAGDSIVFLRA+ DL VGIRRAK+ GIGGG E P +GWNS G +
Sbjct: 185 GWSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAP-AGWNSGGG--IR 241
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
P+GGFS FLREE++++ RNG S N + G+V+PE V+EA LAA+
Sbjct: 242 PMPYGGFSAFLREEDSQLLRNG-----------LSPNAK---GKVRPEAVIEAATLAANM 287
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+PFEVVYYPRAS PEFCVKA+ V+AA++V W GMRFKM FETEDSSRISWFMGTISSV
Sbjct: 288 QPFEVVYYPRASAPEFCVKANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVN 347
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
ADP WPNSPWRLLQVTWDEP+LLQNVKRVSPWLVE+VSNMP IHLS +S +KK R P
Sbjct: 348 FADP-RWPNSPWRLLQVTWDEPELLQNVKRVSPWLVEIVSNMPTIHLSHYSTQQKKPRFP 406
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQ 478
Q DF FDGQ ++P F N LGPS+P CL+++T AGIQGARHA +GIS S+ H NKLQ
Sbjct: 407 QHPDFSFDGQISLPAFPSNFLGPSNPFGCLAESTPAGIQGARHANYGISLSNLHF-NKLQ 465
Query: 479 SGLFLSSLQRFTPNSRDFDGILTSHTNSS---------ENLSCLLTMGNSNQNLEKSENI 529
SGLF + F P +L +N++ +N+SCLL+M + Q +K +++
Sbjct: 466 SGLFQAG---FPPLDHTASPVLRVSSNNAATMQKVGTGDNVSCLLSMSTATQPSKKVDDV 522
Query: 530 KKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG-STHEQRIS 588
K Q +LFGQ I TEQQIS + S + +S DG++DK+ SDG G + H Q S
Sbjct: 523 KAPQLVLFGQTILTEQQISLNTS--AKTDPTRNNSFDGNADKMCKFSDGFGYALHPQGSS 580
Query: 589 IEKSSSSEFFWNRSFQV-TESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
+E+ W + Q T + L+TGHCKVF+ESED+GRT+DL++L SY+ELYR+LA MF
Sbjct: 581 LER-----LQWYKDQQKETMASLETGHCKVFMESEDIGRTMDLTMLGSYDELYRKLADMF 635
Query: 648 GIERSDMLSHVLYQDASGAIKRTGDEPF--SDFMKSAKRLTILMGSGSDSVG 697
GIE+S +LSH+LY+D +GA+K GDE F S+F K+A+RLTILM S SD G
Sbjct: 636 GIEKSVVLSHMLYRDTTGAVKHIGDEAFSCSEFTKTARRLTILMDSNSDGRG 687
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/701 (59%), Positives = 510/701 (72%), Gaps = 32/701 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF---PSSSRIPPLIF 58
+E +K +D QLWHACAG MVQ+P +NS VFYFPQGHAEH+ V+F P +S
Sbjct: 13 EEADKCLDSQLWHACAGGMVQMPAVNSKVFYFPQGHAEHACEPVDFRNLPGASHT----L 68
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS-ESEKPASFAKTL 117
CRVS++KF+AD ETDEV+AKI+LVPI +NEID +D +++N + +++KP SFAKTL
Sbjct: 69 CRVSAIKFMADPETDEVFAKIRLVPINSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKTL 128
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
TQSDANNGGGFSVPRYCAE IFPRLDYTADPPVQT++AKDVHGE WKFRHIYRGTPRRHL
Sbjct: 129 TQSDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHL 188
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FVN KKLVAGDS+VFLRA++GDLCVG+RRAK+ I GG P S WN G+ V
Sbjct: 189 LTTGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGG---PESLWNPALGNLV 245
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
P+GGF F RE+E+KM +NG N G+ + S + G+V+ E V++A LAA+
Sbjct: 246 V--PYGGFGAFSREDEHKMVKNGRGN----GNGSKSNESLMGRGKVRAESVIQAAVLAAN 299
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
G PFE VYYPRA+TPEF VKAS VK M++ W GMRFKMAFETEDSSRISWFMGT+ SV
Sbjct: 300 GLPFETVYYPRANTPEFFVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSV 359
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
Q ADP+ WP SPWRLLQVTWDEPDLLQNVKRVSPWLVEL S+M IHLSPFS RKKLRL
Sbjct: 360 QDADPLCWPGSPWRLLQVTWDEPDLLQNVKRVSPWLVELASHMSAIHLSPFSSPRKKLRL 419
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKL 477
PQ DFP DGQF MP+FSGN L PSSP L +N AG+QGARHA +G+ SD ++ NKL
Sbjct: 420 PQHPDFPIDGQFPMPIFSGNLLQPSSPFGFLPNNIPAGMQGARHAHYGLPLSDLNL-NKL 478
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNS--------SENLSCLLTMGNSNQNLEKSENI 529
+GL + P D LT +N SE +SC LTM +S Q ++++++
Sbjct: 479 HTGLLRAGF----PPLLDHTASLTKASNIQTIQKPILSEGVSCELTMSHSTQTSKRADDV 534
Query: 530 KKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSS-DGHSDKVKASSDGSGSTHEQRIS 588
K Q +LFGQ I EQ IS SCSD+ S VL ++S +G DK+ S+GS ST R
Sbjct: 535 KIPQLVLFGQRIVAEQYISRSCSDNTGSPVLARNSCFEGKLDKMAKFSEGSVSTLPHRGL 594
Query: 589 IEKSSSSEFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
+ SS WN+ + + +E L+ GHCKVFLESEDVGRTLDL +L SYEELYR+LA MF
Sbjct: 595 SKHSSCEGLQWNKNNHRKSEQSLEIGHCKVFLESEDVGRTLDLQLLESYEELYRKLADMF 654
Query: 648 GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
G+ S+ S++LY+D +G K G+EPFS+F K+A+RLTI+
Sbjct: 655 GLRNSEKFSNLLYRDDNGITKHIGEEPFSNFSKTARRLTIV 695
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 814 bits (2102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/748 (60%), Positives = 530/748 (70%), Gaps = 82/748 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E EKS+DPQLWHACAGSMVQIP LNSTVFYF QGH EH+ +F + R+PPLI CRV
Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDF-HAPRVPPLILCRVV 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSE---SEKPASFAKTLT 118
S+KFLAD+ETDEV+AKI L+P+P N++D E D L L SD EKPASFAKTLT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY+A+PPVQTV+AKD+HGE WKFRHIYRGTPRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G SN GS
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRG----------GLGSNAGS--- 227
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
NP+ GFS FLR++E+ + M + G N+ GN G E V EAVA AA G
Sbjct: 228 DNPYPGFSGFLRDDESTTTTSKLMMMKRNG--NNDGNAAATGRVRV-EAVAEAVARAACG 284
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+ FEVVYYPRASTPEFCVKA+ V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQ
Sbjct: 285 QAFEVVYYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 344
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+P
Sbjct: 345 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIP 403
Query: 419 QQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG----- 465
Q +FPF G +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 404 QPFEFPFHGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPS 461
Query: 466 ----ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
++ S + NNKL S +FLSS F P + + +S N+SC LTMGN
Sbjct: 462 LLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNPA 515
Query: 521 QNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSD 577
+K + ++K HQF+LFGQPI TEQQ+ + + L + + + A
Sbjct: 516 MVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGLVARG- 568
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
WN S Q GL+TGHCKVF+ESEDVGRTLDLSV+ SY+
Sbjct: 569 -------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSVIGSYQ 605
Query: 638 ELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
ELYR+LA MF I ERSD+L+HV+Y+DA+G IKR GDEPFSDFMK+ KRLTI M G D+V
Sbjct: 606 ELYRKLAEMFHIEERSDLLTHVVYRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDNV 665
Query: 697 GRTWITGMRTPKNGLDASNKTGPLSIFA 724
+TWITG+RT +NG+DAS KTGPLSIFA
Sbjct: 666 RKTWITGIRTGENGIDASTKTGPLSIFA 693
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/755 (59%), Positives = 531/755 (70%), Gaps = 87/755 (11%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E EKS+DPQLWHACAGSMVQIP +NSTVFYF QGH EH+ +F + R+PPLI CRV
Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDF-HAPRVPPLILCRVV 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE----SEKPASFAKTLT 118
++KFLAD+ETDEV++KI L+P+P N++D E++ + + D +EKPASFAKTLT
Sbjct: 61 AVKFLADAETDEVFSKITLLPLPGNDLDLENDAVLGLTPSPDGNGPNGNEKPASFAKTLT 120
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYRGTPRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N G S+N +
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSN-----GVGSDNNNI-- 233
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
P+ GFS FLR++E ++ M + G + N GGRV+ E V EAVA AA G
Sbjct: 234 --PYPGFSGFLRDDETTTSKL--MMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARG 289
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+ FEVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQ
Sbjct: 290 QAFEVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQ 349
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+P
Sbjct: 350 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKLRIP 408
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLS----DNTSAGIQGARHAQ--FGISS---- 468
Q +FPFDG P F+ N +C LS +N AGIQGAR AQ FG S
Sbjct: 409 QPFEFPFDGT-KFPFFANN---NGESMCYLSNDNNNNAPAGIQGARQAQQLFGSPSPSLL 464
Query: 469 ------SDFHVNNKLQS----GLFLSSLQRFTPNSRDFDGILTSHT------NSSENLSC 512
+ + NKL +FLS F P +D I+ S N++ N+SC
Sbjct: 465 SDLNNLNSYSAVNKLHQSSSPAMFLSG---FNPRHHHYDNIVLSRQGRDTEFNNNNNISC 521
Query: 513 LLTMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
LTMGN + +KS ++K HQFLLFGQPI TEQQ+ + K S + ++
Sbjct: 522 SLTMGNPGLVHDKKKSGSVKTHQFLLFGQPILTEQQVMNR-----------KRSLEEEAE 570
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
+ GS WN Q GL+TGHCKVF+ESEDVGRTLDL
Sbjct: 571 AAQEEKTGS-------------------WNYGLQ----GLETGHCKVFMESEDVGRTLDL 607
Query: 631 SVLSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILM 689
SV+ SY+ELYR+LA MF I ERSD+L+HV+Y+DA+G IKR GDEPFSDFM++ KRLTI M
Sbjct: 608 SVIGSYQELYRKLAEMFCIEERSDLLTHVVYRDANGVIKRIGDEPFSDFMRATKRLTIKM 667
Query: 690 GSGSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
G D+V +TWITG+R +NG+D+S KTGPLSIFA
Sbjct: 668 DIGGDNVRKTWITGIRNGENGIDSSTKTGPLSIFA 702
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 810 bits (2093), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/753 (59%), Positives = 537/753 (71%), Gaps = 80/753 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CRV+
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRVA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLADSETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G ++ + + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRG---------GLGSNGDNNSNSNNP 231
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N+ G ++ + GGRV+ E V EAVA AA G+ F
Sbjct: 232 YPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAF 291
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 292 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 351
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 352 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 410
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLS-----DNTSAGIQGARHAQ--FG------ 465
DFPFDG +F M P F+ G +C LS +N AGIQGAR AQ FG
Sbjct: 411 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSTNDNNNNAPAGIQGARQAQQLFGSPSPSL 470
Query: 466 ---ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLL 514
++ + FH NKLQ +FLS F P + ++ T +E N+SC L
Sbjct: 471 LSDLNLNTFHSGNKLQQSSSSPAMFLSG---FNPRHHYDNIVVPRQTRDAEFNNNISCSL 527
Query: 515 TMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
T+GN Q+ +KS ++K HQFLLFGQPI TEQQ+ ++
Sbjct: 528 TIGNPGLVQDKKKSGSVKTHQFLLFGQPILTEQQV---------------------MNRK 566
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
+A + + + ++ WN Q G++TGHCKVF+ESEDVGRTLDLSV
Sbjct: 567 RALEEEAEKEEKGGLT----------WNYGLQ----GIETGHCKVFMESEDVGRTLDLSV 612
Query: 633 LSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGS 691
+ SY+ELYR+LA MFGI ERSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 613 IGSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDI 672
Query: 692 GSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 673 SGDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 705
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/752 (59%), Positives = 538/752 (71%), Gaps = 79/752 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CR++
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRLA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HG+ WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G ++ + + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRG---------GLGSNGDNNSNSNNP 231
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N+ G ++ + GGRV+ E V EAVA AA G+ F
Sbjct: 232 YPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAF 291
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 292 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 351
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 352 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 410
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSD----NTSAGIQGARHAQ--FG------- 465
DFPFDG +F M P F+ G +C LS+ N AGIQGAR AQ FG
Sbjct: 411 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNDNNNNAPAGIQGARQAQQLFGSPSPSLL 470
Query: 466 --ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLLT 515
++ + FH +KLQ +FLS F P + +L T +E N+SC LT
Sbjct: 471 SDLNLNTFHSGSKLQQSSSSPAMFLSG---FNPRHHYDNIVLPRQTRDAEFNNNISCSLT 527
Query: 516 MGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVK 573
+GN Q+ +KS+++K HQFLLFGQPI TEQQ+ ++ +
Sbjct: 528 IGNPGLAQDKKKSDSVKTHQFLLFGQPILTEQQVM---------------------NRKR 566
Query: 574 ASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVL 633
A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLSV+
Sbjct: 567 ALEEEAEEEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLSVI 612
Query: 634 SSYEELYRRLAIMFGIE-RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSG 692
SY+ELYR+LA MFGIE RSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 613 GSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDIS 672
Query: 693 SDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 673 GDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 704
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 808 bits (2087), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/759 (60%), Positives = 538/759 (70%), Gaps = 100/759 (13%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E EKS+DPQLWHACAGSMVQIP +NSTVFYF QGH EH+ +F + R+PPLI CRV
Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDF-HAPRVPPLILCRVV 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSD-----SESEKPASFAKT 116
S+KFLAD+ETDEV+AKI L+P+P N++D E D L L SD + +EKPASFAKT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDVNVNGNGNEKPASFAKT 120
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYRGTPRRH
Sbjct: 121 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRH 180
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G +
Sbjct: 181 LLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRG------------GLGSTGL 228
Query: 237 VTGNPFGGFSCFLREEENK-------MARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVL 289
+ NP+ GFS FLR++E M RNGN GN GGRV+ E V
Sbjct: 229 GSDNPYPGFSGFLRDDETSTTSKLMMMKRNGN-----------DGNAAA-GGRVRVEAVA 276
Query: 290 EAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISW 349
EAVA AA G+ FEVVYYPRASTPEFCVKA+ V++AMR+ W GMRFKMAFETEDSSRISW
Sbjct: 277 EAVARAACGQAFEVVYYPRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISW 336
Query: 350 FMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS 409
FMGT+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFS
Sbjct: 337 FMGTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFS 396
Query: 410 PARKKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ 463
P RKK+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ
Sbjct: 397 P-RKKIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQ 453
Query: 464 --FG--------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSH---TNSSEN 509
FG + + +NKLQS +FLS F P +D I++ T +S N
Sbjct: 454 QLFGSPSPSLLSDLNLSSYSSNKLQSPAMFLSG---FNPRHH-YDNIVSRQARDTENSNN 509
Query: 510 LSCLLTMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSD 566
+SC LT+GN +K + ++K HQFLLFGQPI TEQQ+ + +S +
Sbjct: 510 ISCSLTIGNPAMVQDKKKSGGSVKTHQFLLFGQPILTEQQVMNR----------KRSLEE 559
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGR 626
+ + SS G T WN FQ GL+TGHCKVF+ESEDVGR
Sbjct: 560 EAEAQEEKSSAARGLT----------------WNYGFQ----GLETGHCKVFMESEDVGR 599
Query: 627 TLDLSVLSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRL 685
TLDLSV+ SY+ELYR+LA MF I ERSD+L+HV+Y+DA+GAIKR GDEPFSDFMKS KRL
Sbjct: 600 TLDLSVIGSYQELYRKLAEMFHIEERSDLLTHVVYRDANGAIKRIGDEPFSDFMKSTKRL 659
Query: 686 TILMGSGSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
TI M G D+V +TWITG+RT +NG+DA+ KTGPLSIFA
Sbjct: 660 TIKMDIGGDNVRKTWITGIRTGENGIDAT-KTGPLSIFA 697
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 805 bits (2080), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/706 (59%), Positives = 512/706 (72%), Gaps = 53/706 (7%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------ 52
MKEV E+ +DPQLWHACAG MVQ+PP S V+YFPQGHAEH+ ++
Sbjct: 20 MKEVGEERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGP 79
Query: 53 --IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKP 110
+P L+ C V+ ++FLAD ETDEV+AKI+LVP+ +E+ F + L + ++++ EK
Sbjct: 80 RLLPALVLCSVAGVRFLADPETDEVFAKIRLVPVGPDEVAFREPE-GLGPLEAEAQ-EKL 137
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
ASFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHIYR
Sbjct: 138 ASFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYR 197
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E SGWN
Sbjct: 198 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMEC-VSGWN 256
Query: 231 SNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLE 290
+ +GGFS FL++EENKM NS+G G++K V+E
Sbjct: 257 APG--------YGGFSAFLKDEENKM-------------MNSTGGYLKGRGKLKIADVVE 295
Query: 291 AVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
A +LAA+G+PFEVVYYPRASTPEF VKA++++AAMR+HW GMRFKMAFETEDSSRISWF
Sbjct: 296 AASLAANGQPFEVVYYPRASTPEFVVKAASMQAAMRIHWCPGMRFKMAFETEDSSRISWF 355
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
MGTISSVQVADPI WPNSPWRLLQV+WDEPDLLQNVK VSPWLVELVS++P IHL PFSP
Sbjct: 356 MGTISSVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSP 415
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSS 469
RKKLR+PQ DFPFDG P+F GNPLGPS S L C DN+ AGIQGARHAQFG+ +
Sbjct: 416 PRKKLRVPQHPDFPFDGHLFNPIFHGNPLGPSNSSLRCYPDNSPAGIQGARHAQFGLPLT 475
Query: 470 DFHVNNKLQSGLF----LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEK 525
D H NKL GLF + L TP+SR G + S + +++SCLLT+G + Q+ EK
Sbjct: 476 D-HQLNKLHLGLFQGGGFNRLDALTPSSRIPKGCMISSAPAHDSVSCLLTIG-TPQSTEK 533
Query: 526 SENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQ-VLGKSSSDGHSDKVKASSDGSGSTHE 584
S++ K +LFG+ I TEQQ++ S S D +S SS G++ K +SDGSGS+
Sbjct: 534 SDDRKTPHIMLFGKAILTEQQMTSSGSRDTLSSGATANSSPYGNAPKAGNTSDGSGSSIC 593
Query: 585 QRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLA 644
S + SS+F GL+ GHCKVF+ESEDVGRT+DLS SYEELY RLA
Sbjct: 594 IGFSSQGHESSDF-----------GLEAGHCKVFMESEDVGRTIDLSDFVSYEELYGRLA 642
Query: 645 IMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
MFGIE+ +++SH+ Y+D +G + TG+ PFSDFMK A+RLTI+ G
Sbjct: 643 DMFGIEKEEIISHLRYRDTAGTVMHTGELPFSDFMKVARRLTIISG 688
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 804 bits (2077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/753 (59%), Positives = 537/753 (71%), Gaps = 80/753 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CRV+
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRVA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLADSETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADSETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G ++ + + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRG---------GLGSNGDNNSNSNNP 231
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N+ G ++ + GGRV+ E V EAVA AA G+ F
Sbjct: 232 YPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAF 291
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 292 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 351
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 352 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 410
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSDNTS-----AGIQGARHAQ--FG------ 465
DFPFDG +F M P F+ G +C LS+N + AGIQGAR AQ FG
Sbjct: 411 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNNDNNNNAPAGIQGARQAQQLFGSPSPSL 470
Query: 466 ---ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLL 514
++ + FH NKLQ +FLS F P + ++ T +E N+SC L
Sbjct: 471 LSDLNLNTFHSGNKLQQSSSSPAMFLSG---FNPRHHYDNIVVPRQTRDAEFNNNISCSL 527
Query: 515 TMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
T+GN Q+ +KS ++K HQFLLFGQ I TEQQ+ ++
Sbjct: 528 TIGNPGLVQDKKKSGSVKTHQFLLFGQSILTEQQV---------------------MNRK 566
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
+A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLSV
Sbjct: 567 RALEEEAEKEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLSV 612
Query: 633 LSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGS 691
+ SY+ELYR+LA MFGI ERSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 613 IGSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDI 672
Query: 692 GSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 673 SGDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 705
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/753 (59%), Positives = 538/753 (71%), Gaps = 80/753 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CR++
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRLA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HG+ WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G ++ + + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRG---------GLGSNGDNNSNSNNP 231
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N+ G ++ + GGRV+ E V EAVA AA G+ F
Sbjct: 232 YPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAF 291
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 292 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 351
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 352 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 410
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSDNTS-----AGIQGARHAQ--FG------ 465
DFPFDG +F M P F+ G +C LS+N + AGIQGAR AQ FG
Sbjct: 411 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNNDNNNNAPAGIQGARQAQQLFGSPSPSL 470
Query: 466 ---ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLL 514
++ + FH NKLQ +FLS F P + ++ T +E N+SC L
Sbjct: 471 LSDLNLNTFHSGNKLQQSSSSPAMFLSG---FNPRHHYDNIVVPRQTRDAEFNNNISCSL 527
Query: 515 TMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
T+GN Q+ +KS ++K HQFLLFGQPI TEQQ+ ++
Sbjct: 528 TIGNPGLVQDKKKSGSVKTHQFLLFGQPILTEQQV---------------------MNRK 566
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
+A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLSV
Sbjct: 567 RALEEEAEKEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLSV 612
Query: 633 LSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGS 691
+ SY+ELYR+LA MFGI ERSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 613 IGSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDI 672
Query: 692 GSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 673 SGDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 705
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/754 (59%), Positives = 538/754 (71%), Gaps = 81/754 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CR++
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRLA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HG+ WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G ++ + + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRG---------GLGSNGDNNSNSNNP 231
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N+ G ++ + GGRV+ E V EAVA AA G+ F
Sbjct: 232 YPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAF 291
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 292 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 351
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 352 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 410
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSDNTS------AGIQGARHAQ--FG----- 465
DFPFDG +F M P F+ G +C LS+N + AGIQGAR AQ FG
Sbjct: 411 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNNDNNNNNAPAGIQGARQAQQLFGSPSPS 470
Query: 466 ----ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCL 513
++ + FH NKLQ +FLS F P + ++ T +E N+SC
Sbjct: 471 LLSDLNLNTFHSGNKLQQSSSSPAMFLSG---FNPRHHYDNIVVPRQTRDAEFNNNISCS 527
Query: 514 LTMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDK 571
LT+GN Q+ +KS ++K HQFLLFGQPI TEQQ+ ++
Sbjct: 528 LTIGNPGLVQDKKKSGSVKTHQFLLFGQPILTEQQV---------------------MNR 566
Query: 572 VKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLS 631
+A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLS
Sbjct: 567 KRALEEEAEKEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLS 612
Query: 632 VLSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
V+ SY+ELYR+LA MFGI ERSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 613 VIGSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMD 672
Query: 691 SGSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 673 ISGDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 706
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/753 (59%), Positives = 535/753 (71%), Gaps = 82/753 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CRV+
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRVA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N ++ + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNG------LGSDNNNNSNNP 234
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N G+ N + GGRV+ E V EAVA AA G+ F
Sbjct: 235 YPGFSGFLRDDEITTSKLMMMKRNG-GNVN---DANAPGGRVRVEAVAEAVARAACGQAF 290
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 291 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 350
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 351 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 409
Query: 422 DFPFDGQFTMPLFS----GNPLGPSSPLCCLSD----NTSAGIQGARHAQ--FG------ 465
DFPFDG P+FS G +C LS+ N AGIQGAR AQ FG
Sbjct: 410 DFPFDGT-KFPMFSHGFAAGNNGGGESMCYLSNDNNNNAPAGIQGARQAQQLFGSPSPSL 468
Query: 466 ---ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLL 514
++ + FH NKLQ +FLS F P + +L T +E N+SC L
Sbjct: 469 LSDLNLNTFHSGNKLQQSSSSPAMFLSG---FNPRHHYDNIVLPRQTRDAEFNNNISCSL 525
Query: 515 TMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
T+GN Q+ +KS+++K HQFLLFGQ I TEQQ+ ++
Sbjct: 526 TIGNPGLAQDKKKSDSVKTHQFLLFGQSILTEQQVM---------------------NRK 564
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
+A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLSV
Sbjct: 565 RALEEEAEKEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLSV 610
Query: 633 LSSYEELYRRLAIMFGIE-RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGS 691
+ SY+ELYR+LA MFGIE RSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 611 IGSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDI 670
Query: 692 GSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 671 CGDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 703
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/752 (59%), Positives = 537/752 (71%), Gaps = 80/752 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLW ACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CRV+
Sbjct: 2 EQERSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRVA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ G+LCVGIRRAK+G G N ++ + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNG------LGSDNNNNSNNP 234
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N G+ N + GGRV+ E V EAVA AA G+ F
Sbjct: 235 YPGFSGFLRDDEITTSKLMMMKRNG-GNVN---DANAPGGRVRVEAVAEAVARAACGQAF 290
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 291 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 350
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 351 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 409
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSD----NTSAGIQGARHAQ--FG------- 465
DFPFDG +F M P F+ G +C LS+ N AGIQGAR AQ FG
Sbjct: 410 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNDNNNNAPAGIQGARQAQQLFGSPSPSLL 469
Query: 466 --ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLLT 515
++ + FH +KLQ +FLS F P + +L T +E N+SC LT
Sbjct: 470 SDLNLNTFHSGSKLQQSSSSPAMFLSG---FNPRHHYDNIVLPRQTRDAEFNNNISCSLT 526
Query: 516 MGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVK 573
+GN Q+ +KS+++K HQFLLFGQPI TEQQ+ ++ +
Sbjct: 527 IGNPGLAQDKKKSDSVKTHQFLLFGQPILTEQQVM---------------------NRKR 565
Query: 574 ASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVL 633
A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLSV+
Sbjct: 566 ALEEEAEEEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLSVI 611
Query: 634 SSYEELYRRLAIMFGIE-RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSG 692
SY+ELYR+LA MFGIE RSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 612 GSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDIS 671
Query: 693 SDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 672 GDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 703
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 801 bits (2068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/754 (58%), Positives = 536/754 (71%), Gaps = 81/754 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLWHACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CR++
Sbjct: 2 EQERSLDPQLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRLA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HG+ WKFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G ++ + + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRG---------GLGSNGDNNSNSNNP 231
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N+ G ++ + GGRV+ E V EAVA AA G+ F
Sbjct: 232 YPGFSGFLRDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAF 291
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDSSRISWFMGT+S+VQVAD
Sbjct: 292 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVAD 351
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKR SPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 352 PIRWPNSPWRLLQVAWDEPDLLQNVKRASPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 410
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSDNTS------AGIQGARHAQ--FG----- 465
DFPFDG +F M P F+ G +C LS+N + AGIQGAR AQ FG
Sbjct: 411 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNNDNNNNNAPAGIQGARQAQQLFGSPSPS 470
Query: 466 ----ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCL 513
++ + FH NKLQ +FL F P + ++ T +E N+SC
Sbjct: 471 LLSDLNLNTFHSGNKLQQSSSSPAMFLPG---FNPRHHYDNIVVPRQTRDAEFNNNISCS 527
Query: 514 LTMGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDK 571
LT+GN Q+ +KS ++K HQFLLFGQPI TEQQ+ ++
Sbjct: 528 LTIGNPGLVQDKKKSGSVKTHQFLLFGQPILTEQQV---------------------MNR 566
Query: 572 VKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLS 631
+A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLS
Sbjct: 567 KRALEEEAEKEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLS 612
Query: 632 VLSSYEELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
V+ SY+ELYR+LA MFGI ERSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 613 VIGSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMD 672
Query: 691 SGSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 673 ISGDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 706
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 800 bits (2065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/706 (60%), Positives = 511/706 (72%), Gaps = 51/706 (7%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----I 53
MKEV E+ +DPQLWHACAG MVQ+PP S V+YFPQGHAEH+ G ++ +
Sbjct: 22 MKEVGAERCLDPQLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRPL 81
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD--SESEKPA 111
P L+ C V+ ++FLAD +TDEV+AKI+LVP+ E F + L +GSD EK +
Sbjct: 82 PALVLCCVAGVRFLADPDTDEVFAKIRLVPVGPGEAGFREPE-GLGPLGSDPPEAREKLS 140
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHIYRG
Sbjct: 141 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRG 200
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
TPRRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E SGWN+
Sbjct: 201 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMEC-ISGWNA 259
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
+GGFS FL++EENKM G +G +G G +VK V+EA
Sbjct: 260 PG--------YGGFSAFLKDEENKMMNGG-----------PAGYVKGRG-KVKIADVVEA 299
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
LAA+ +PFEVVYYPRASTPEF VKA+A++AAMR+HW GMRFKMAFETEDSSRISWFM
Sbjct: 300 ATLAANSQPFEVVYYPRASTPEFVVKAAAMQAAMRIHWCPGMRFKMAFETEDSSRISWFM 359
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTISSVQVADP+ WPNSPWRLLQVTWDEPDLLQNVK VSPWLVELVS++P IHL PFSP
Sbjct: 360 GTISSVQVADPLRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPP 419
Query: 412 RKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTS-AGIQGARHAQFGISSS 469
RKKLR+PQ DFP DG P+F GNPLGPS SPLCC SDN S AGIQGARHAQFG+ +
Sbjct: 420 RKKLRVPQHPDFPLDGHLFNPIFHGNPLGPSNSPLCCYSDNNSPAGIQGARHAQFGLPLT 479
Query: 470 DFHVNNKLQSGLF----LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEK 525
D H NKL GLF + L TP+SR G++ S + +++SCLLT+G + Q+ EK
Sbjct: 480 D-HQLNKLHLGLFHGGGFNGLDALTPSSRIPKGLVLSSAPAHDSVSCLLTIG-TPQSTEK 537
Query: 526 SENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQ-VLGKSSSDGHSDKVKASSDGSGSTHE 584
S + K +LFG+ I TEQQ++ S S + +S G SS + K +SDGSGS+
Sbjct: 538 SVDRKTPHIMLFGKAILTEQQMTSSGSRETLSSGATGNSSPISAALKAGNTSDGSGSS-- 595
Query: 585 QRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLA 644
I I SS + + ++ GL+ GHCKVF+ESEDVGRT+DLSV SY+ELY RLA
Sbjct: 596 --ICIGFSS-------QGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYDELYGRLA 646
Query: 645 IMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
MFGI++ ++ SH+ Y+D +GA+ TG PFSDFMK A+RLTI G
Sbjct: 647 DMFGIDKEEITSHLRYRDTAGAVMHTGGLPFSDFMKVARRLTITSG 692
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 795 bits (2054), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/708 (59%), Positives = 503/708 (71%), Gaps = 40/708 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHS-LGSVNFP----SSSRIPPLIFCR 60
+ +DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G +FP + IP L+ CR
Sbjct: 20 RCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQCGGGDFPPGAGAGRGIPALVLCR 79
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANE----IDFEDNNLSLNSVGSDSESEKPASFAKT 116
V+ + F+AD +TDEV+AKI+LVP +E +D + +E+EKPASFAKT
Sbjct: 80 VAGVHFMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEKPASFAKT 139
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LTQSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRH
Sbjct: 140 LTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRH 199
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS+FVNQKKLVAGDSIVF+R ++GDLCVGIRRAKKG G P
Sbjct: 200 LLTTGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKG---GIGGPELLPPPPPPPG 256
Query: 237 VTGNPFGGFSCFLREEE---NKMARNGNMNLNSYGSFNSSGNTRGNGG-RVKPEMVLEAV 292
+GGFS FLR EE NKM ++ RG RV+PE V EA
Sbjct: 257 TN---YGGFSMFLRGEEDGSNKM-------------MAAAAAARGKARVRVRPEEVAEAA 300
Query: 293 ALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
LAASG+PF+VVYYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMG
Sbjct: 301 NLAASGQPFDVVYYPRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMG 360
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
T+S+VQV+DPI WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP IHL+PFSP R
Sbjct: 361 TVSAVQVSDPIRWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPR 420
Query: 413 KKLRLPQQLDFPFDGQFTMPLFSGNPLGPS--SPLCCLSDNTSAGIQGARHAQFGISSSD 470
KKL +P + P DGQF P+F GNPLG P+C D T AGIQGARHAQFGIS SD
Sbjct: 421 KKLCVPFYPELPLDGQFPAPMFHGNPLGRGGVGPMCYFPDGTPAGIQGARHAQFGISLSD 480
Query: 471 FHVNNKLQSGLFLSSLQR---FTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSE 527
H+ NKLQS L L R G++ H + +++SCLLT+GN +QN +KS+
Sbjct: 481 LHL-NKLQSSLSPHGLHNQIDHGAQPRIAAGLIIGHPKARDDISCLLTIGN-HQNSKKSD 538
Query: 528 NIKKH-QFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQR 586
K Q +LFG+PI TEQQI+ + KS SDG ++K +SD S Q
Sbjct: 539 GKKAAPQLMLFGKPILTEQQITLGNAGGFSPTSARKSPSDGSAEKTANNSDLSSPRSNQN 598
Query: 587 ISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIM 646
+ E S + +V + GL+TGHCK+F++SEDVGRTLDL+ + SY+ELYRRLA M
Sbjct: 599 GTTENLSCGGVPLCQDSKVLDLGLETGHCKIFMQSEDVGRTLDLAAVGSYDELYRRLADM 658
Query: 647 FGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSD 694
FGIE+++++ V Y+DA+GA+K TGDEPFSDF K+A+RLTIL G+G +
Sbjct: 659 FGIEKAELMRQVFYRDAAGALKHTGDEPFSDFTKTARRLTILTGTGGE 706
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 793 bits (2049), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/752 (59%), Positives = 535/752 (71%), Gaps = 80/752 (10%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E E+S+DPQLW ACAGSMVQIP LNSTVFYFPQGHAEH+ +F + R+PPLI CRV+
Sbjct: 2 EQERSLDPQLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDF-HAPRVPPLILCRVA 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+KFLAD+ETDEVY+KI L+P+P N++D E D L L + +EKPASFAKTLTQSD
Sbjct: 61 SVKFLADAETDEVYSKITLLPLPGNDLDLENDAVLGLTPSPDVNGNEKPASFAKTLTQSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE KFRHIYRGTPRRHLLTTG
Sbjct: 121 ANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKL+AGDSIVFLR++ G+LCVGIRRAK+G G N ++ + + NP
Sbjct: 181 WSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNG------LGSDNNNNSNNP 234
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR++E ++ M N G+ N + GGRV+ E V EAVA AA G+ F
Sbjct: 235 YPGFSGFLRDDEITTSKLMMMKRNG-GNVN---DANAPGGRVRVEAVAEAVARAACGQAF 290
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKAS V++AMR+ W GMRFKMAFETEDS RISWFMGT+S+VQVAD
Sbjct: 291 EVVYYPRASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAVQVAD 350
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKKLR+PQ
Sbjct: 351 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSP-RKKLRIPQPF 409
Query: 422 DFPFDG-QFTM--PLFSGNPLGPSSPLCCLSD----NTSAGIQGARHAQ--FG------- 465
DFPFDG +F M P F+ G +C LS+ N AGIQGAR AQ FG
Sbjct: 410 DFPFDGTKFPMFSPGFAAGNNGGGESMCYLSNDNNNNAPAGIQGARQAQQLFGSPSPSLL 469
Query: 466 --ISSSDFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSSE---NLSCLLT 515
++ + FH +KLQ +FLS F P + +L T +E N+SC LT
Sbjct: 470 SDLNLNTFHSGSKLQQSSSSPAMFLSG---FNPRHHYDNIVLPRQTRDAEFNNNISCSLT 526
Query: 516 MGNSN--QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVK 573
+GN Q+ +KS+++K HQFLLFGQPI TEQQ+ ++ +
Sbjct: 527 IGNPGLAQDKKKSDSVKTHQFLLFGQPILTEQQVM---------------------NRKR 565
Query: 574 ASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVL 633
A + + + ++ WN Q GL+TGHCKVF+ESEDVGRTLDLSV+
Sbjct: 566 ALEEEAEEEEKGGLT----------WNYGLQ----GLETGHCKVFMESEDVGRTLDLSVI 611
Query: 634 SSYEELYRRLAIMFGIE-RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSG 692
SY+ELYR+LA MFGIE RSD+L+HV+Y+DA+G KR GDEPFSDFM++ KRLTI M
Sbjct: 612 GSYQELYRKLAEMFGIEERSDLLTHVVYRDANGVTKRIGDEPFSDFMRATKRLTIKMDIS 671
Query: 693 SDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
D+V +TWITG+R +NG+D+S KTG LSIFA
Sbjct: 672 GDNVRKTWITGIRNGENGIDSSTKTGQLSIFA 703
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/701 (60%), Positives = 508/701 (72%), Gaps = 49/701 (6%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR---IPPLIF 58
+E E+ +DPQLWHACAG MVQ+PP+ S V+YFPQGHAEH+ ++ +PPL+
Sbjct: 5 REEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAAGARPLPPLVL 64
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNN-----LSLNSVGSDSESEKPASF 113
C V+ ++FLAD ETDEV+AKI+LVP+ E++F + + + V EK +SF
Sbjct: 65 CAVTGVRFLADPETDEVFAKIRLVPLAPGEVEFREPDEFGLGVGGVGVDPADAREKLSSF 124
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
AKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHIYRGTP
Sbjct: 125 AKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTP 184
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
RRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E SGWN+
Sbjct: 185 RRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMEC-MSGWNAPG 243
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
+G S FL++EE KM + G RG G +VK V+EA +
Sbjct: 244 --------YGALSAFLKDEEGKMIKG------------PGGYMRGRG-KVKITDVVEAAS 282
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
LAASG+PFEVVYYPRASTPEF VKA++V+ AMR W GMRFKMAFETEDSSRISWFMGT
Sbjct: 283 LAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGT 342
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I+S QVADPI WPNSPWRLLQVTWDEPDLLQNVK V+PWLVE+VS++P IHL PFSP RK
Sbjct: 343 IASAQVADPIRWPNSPWRLLQVTWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRK 402
Query: 414 KLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSSDFH 472
KLR+PQ DFPFDGQ P+F GNPLGPS S L C SD AGIQGARHAQFG+ +D H
Sbjct: 403 KLRMPQHPDFPFDGQLLNPIFHGNPLGPSNSALRCFSDIAPAGIQGARHAQFGLPLTD-H 461
Query: 473 VNNKLQSGLF----LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSEN 528
+KL GLF + TP S G + S +E++SCLLT+G + Q EKS++
Sbjct: 462 QLSKLHLGLFQGGGFNRFDAITPPSHISKGFVISSAPVNESVSCLLTIG-TPQATEKSDD 520
Query: 529 IKKHQFLLFGQPIRTEQQISHSCSDDVVS-QVLGKSSSDGHSDKVKASSDGSGSTHEQRI 587
KK +LFG+PI TEQQ++ S + S +V G SSSDG+ K SDGSGS+ I
Sbjct: 521 RKKPHIMLFGKPILTEQQMNSRGSRETFSPEVTGNSSSDGNVQKTGNVSDGSGSS----I 576
Query: 588 SIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
I SS + + +E GL+ GHCKVF+ESEDVGRT+DLSV SYEELY +LA MF
Sbjct: 577 CIGFSS-------QGHEASELGLEAGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMF 629
Query: 648 GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
GIE+++++SH+ Y+DA+GA+K TG+EPFSDFMK A+RLTI+
Sbjct: 630 GIEKAEIMSHLCYRDAAGAVKHTGEEPFSDFMKVARRLTII 670
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 783 bits (2022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/716 (58%), Positives = 509/716 (71%), Gaps = 55/716 (7%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
+E ++ +DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G V + R+P L+ CRV
Sbjct: 14 RESDRCLDPQLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQGPVVDLPAGRVPALVLCRV 73
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS---ESEKPASFAKTLT 118
++++F+AD +TDEV+AKI+L P+ NE + + + + +KPASFAKTLT
Sbjct: 74 AAVRFMADPDTDEVFAKIRLAPVRPNEPGYAADADDAIGAAAAGGGAQEDKPASFAKTLT 133
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHLL
Sbjct: 134 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 193
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWSTFVNQKKLVAGDSIVF+R ++GDLCVGIRRAKKG GG E+ +
Sbjct: 194 TTGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLH---HHQPPPPPG 250
Query: 239 GNPFGGFSCFLR---EEENKMARNGNMNLNSYGSFNSSGNTRGNG--GRVKPEMVLEAVA 293
G + GFS FLR E+ +KM G TRGN RV+PE V+EA
Sbjct: 251 GGGYAGFSMFLRGGEEDGSKMMATG-------------AATRGNKVRVRVRPEEVVEAAN 297
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
LA SG+PFEVVYYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT
Sbjct: 298 LAVSGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGT 357
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFS-PA 411
+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP I HL+PFS P
Sbjct: 358 VSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPFSPPP 417
Query: 412 RKKLRLPQQLDFPFDG-QFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSS 469
RKKL +P + P +G QF P+F G+PLG P+C D T AGIQGARHAQFGIS S
Sbjct: 418 RKKLCVPLYPELPLEGHQFPAPMFHGSPLGRGVGPMCYFPDGTPAGIQGARHAQFGISLS 477
Query: 470 DFHVNNKLQS-----GLFLSSLQRFTPNSRDFDGILTSHTNSS-ENLSCLLTMGNSNQNL 523
D H+ +KLQS GL L R G++ H ++ +++SCLLT+G + QN
Sbjct: 478 DLHL-DKLQSSLSPHGLHHHQLDGHGVQPRIAAGLIIGHPAAARDDISCLLTIGTTPQNR 536
Query: 524 EKSENIKKH-----QFLLFGQPIRTEQQISHSCSDDVVSQVLG-----KSSSDGHSDKVK 573
+ S ++KK Q +LFG+PI TEQQIS + V G KS SD +++
Sbjct: 537 KPSSDVKKAAAAAPQLMLFGKPILTEQQIS-------LGNVAGFPAPKKSPSDDVAERTV 589
Query: 574 ASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVL 633
++SD S S S + + +V + GL+TGHCKVF++SEDVGRTLDLS +
Sbjct: 590 SNSDVSSPGSNHGGSSRSSGGAPSCQDN--KVPDLGLETGHCKVFMQSEDVGRTLDLSAV 647
Query: 634 SSYEELYRRLAIMFGIERSDMLSHVLYQ-DASGAIKRTGDEPFSDFMKSAKRLTIL 688
SYEELY+RLA MFGI++++++SHV Y+ DASGA+K TGD+PFS+F K+A+RLTIL
Sbjct: 648 GSYEELYQRLADMFGIDKTELMSHVFYRDDASGALKHTGDKPFSEFTKTARRLTIL 703
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/706 (58%), Positives = 502/706 (71%), Gaps = 52/706 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
EK +D WH C GSMVQIPP+NS VFYFPQG+AEH+ +V+F +RIP +I CRV ++
Sbjct: 6 EKCVDSLFWHVCTGSMVQIPPVNSKVFYFPQGYAEHTFTNVDFTVLARIPAMILCRVDAV 65
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
KFLAD+ETDEVYAKI+L+P+ DFED+++ E+EKPA FAKTLTQSDANN
Sbjct: 66 KFLADTETDEVYAKIRLIPVE----DFEDDSVV-------EETEKPAFFAKTLTQSDANN 114
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPRYCAETIFP+LD+TADPPVQ V AKDVHG W FRHIYRGTPRRHLLT+GWS
Sbjct: 115 GGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSGWSA 174
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLVAG S+VF++A++ +LCVGIRR K+G GG E SGW S T +GG
Sbjct: 175 FVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPET-QSGWKS------TACSYGG 227
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
F + E+EN + N NL SYG + G+V P+ V+ LAA+G+PFE+V
Sbjct: 228 F---VTEDENS---STNGNLISYG------ERFRDKGKVSPDEVVRVSCLAANGQPFEIV 275
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YYP ASTPE+CVKAS+V+AAM V W GMRFKMAFETED S+ISWFMG+ISSVQV DPI
Sbjct: 276 YYPGASTPEYCVKASSVRAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIR 335
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
WP+S WRLLQVTWDEPDLLQNVK V+PWLVELVSNMP I+LS SP RK+L LPQ+ FP
Sbjct: 336 WPHSLWRLLQVTWDEPDLLQNVKSVNPWLVELVSNMPDINLSHNSPPRKRLCLPQE--FP 393
Query: 425 FDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLS 484
FDGQF +P FSGNPL SS D+ +AGIQGARH +FG+ D H + KLQ G+
Sbjct: 394 FDGQFPLPSFSGNPLTSSSYSRYPPDSITAGIQGARHVRFGVPLLDLHRSEKLQLGVLQP 453
Query: 485 SL-QRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRT 543
+ Q+ +S G S+EN+SCLLTMG S+Q +EK++N+K +FLLFGQPI T
Sbjct: 454 PVSQQADADSEIPIGTSKVQKESNENISCLLTMGTSSQ-MEKADNVKTPRFLLFGQPILT 512
Query: 544 EQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRIS-----IEKSSSSEFF 598
EQQ+S S QV + +SD K +RI+ + +S SS F
Sbjct: 513 EQQMSSVLSTHAPPQVQTERNSDWAQLKT------------ERITPDWKCLSESLSSTFL 560
Query: 599 WNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHV 658
WN+ + E G T HCKVFL+SEDVGRTLDLSVL SY ELY+RLA MF +ER DM++ V
Sbjct: 561 WNKGYHAAELGASTDHCKVFLDSEDVGRTLDLSVLGSYAELYKRLADMFEMERLDMVTRV 620
Query: 659 LYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGM 704
LY DA+GA K+ GDEPFSDF+K+AKRLTIL SG +S R W+T +
Sbjct: 621 LYLDATGASKQIGDEPFSDFIKTAKRLTILKKSG-NSATRKWLTDL 665
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/712 (58%), Positives = 504/712 (70%), Gaps = 53/712 (7%)
Query: 1 MKEVE-----KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--- 52
MKEV + +DPQLWHACAG MVQ+P S V+YF QGHAEH+ G +++
Sbjct: 1 MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 60
Query: 53 ---IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFE--DNNLSLNSVGSDSES 107
+PPL+ CRV ++FLAD ++DEVYAKI+L P+ E +F D L + G +E
Sbjct: 61 PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 120
Query: 108 --EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
EKP SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHG +WKF
Sbjct: 121 SPEKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKF 180
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYP 225
RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E
Sbjct: 181 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMEC- 239
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
SGWN+ G GGFS FL+EEE+K+ + G V+
Sbjct: 240 MSGWNA------PGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGK-----------VRM 282
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
V+EA +LA+SG+PFEV YYPRASTP+F VKA++V+AAMR+ W GMRFKMAFETEDSS
Sbjct: 283 ADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSS 342
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL 405
RISWFMGTISSVQVADP WPNSPWRLLQVTWDEPDLLQNVK VSPWLVELVS++P IHL
Sbjct: 343 RISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHL 402
Query: 406 SPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQF 464
PFS RKKLR+P DFPF+G P+F GNPLGPS SPLCC D AGIQGARHAQF
Sbjct: 403 GPFSSPRKKLRVPPHPDFPFEGHLLNPIFHGNPLGPSNSPLCCYPDTAPAGIQGARHAQF 462
Query: 465 GISSSDFHVNNKLQSGLFLSS----LQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
G+ +D H NKL GL S L TP SR G + S + +N+SCLL++ ++
Sbjct: 463 GLPLTD-HQLNKLHLGLLHSGSFNRLDAITPPSRISKGFVVSSAPAHDNISCLLSI-STP 520
Query: 521 QNLEKSENIKKH-QFLLFGQPIRTEQQISHSCSDDVVSQ-VLGKSSSDGHSDKVKASSDG 578
Q EKS++ K +LFG+ I TEQQI+ S S + +S V G SS +G++ K +SDG
Sbjct: 521 QVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGSTETLSPGVTGNSSPNGNAHKTGNASDG 580
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
SGS+ I I F ++ + ++ GL+ GHCKVF+ESEDVGRT+DLSV SYEE
Sbjct: 581 SGSS----ICIG-------FSSQGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEE 629
Query: 639 LYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
LY RLA MFGIE+ ++++H+ ++DA+G +K G+ PFSDFMK+A+RLTI+ G
Sbjct: 630 LYGRLADMFGIEKEEIINHLHFRDAAGVVKHPGEVPFSDFMKAARRLTIIAG 681
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 775 bits (2001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/712 (58%), Positives = 504/712 (70%), Gaps = 53/712 (7%)
Query: 1 MKEVE-----KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--- 52
MKEV + +DPQLWHACAG MVQ+P S V+YF QGHAEH+ G +++
Sbjct: 63 MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 122
Query: 53 ---IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFE--DNNLSLNSVGSDSES 107
+PPL+ CRV ++FLAD ++DEVYAKI+L P+ E +F D L + G +E
Sbjct: 123 PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 182
Query: 108 --EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
EKP SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHG +WKF
Sbjct: 183 SPEKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKF 242
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYP 225
RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E
Sbjct: 243 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMEC- 301
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
SGWN+ G GGFS FL+EEE+K+ + G V+
Sbjct: 302 MSGWNA------PGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGK-----------VRM 344
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
V+EA +LA+SG+PFEV YYPRASTP+F VKA++V+AAMR+ W GMRFKMAFETEDSS
Sbjct: 345 ADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSS 404
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL 405
RISWFMGTISSVQVADP WPNSPWRLLQVTWDEPDLLQNVK VSPWLVELVS++P IHL
Sbjct: 405 RISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHL 464
Query: 406 SPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQF 464
PFS RKKLR+P DFPF+G P+F GNPLGPS SPLCC D AGIQGARHAQF
Sbjct: 465 GPFSSPRKKLRVPPHPDFPFEGHLLNPIFHGNPLGPSNSPLCCYPDTAPAGIQGARHAQF 524
Query: 465 GISSSDFHVNNKLQSGLFLSS----LQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
G+ +D H NKL GL S L TP SR G + S + +N+SCLL++ ++
Sbjct: 525 GLPLTD-HQLNKLHLGLLHSGSFNRLDAITPPSRISKGFVVSSAPAHDNISCLLSI-STP 582
Query: 521 QNLEKSENIKKH-QFLLFGQPIRTEQQISHSCSDDVVSQ-VLGKSSSDGHSDKVKASSDG 578
Q EKS++ K +LFG+ I TEQQI+ S S + +S V G SS +G++ K +SDG
Sbjct: 583 QVAEKSDDRKTTPHIMLFGKAIFTEQQITSSGSTETLSPGVTGNSSPNGNAHKTGNASDG 642
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
SGS+ I I SS + + ++ GL+ GHCKVF+ESEDVGRT+DLSV SYEE
Sbjct: 643 SGSS----ICIGFSS-------QGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEE 691
Query: 639 LYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
LY RLA MFGIE+ ++++H+ ++DA+G +K G+ PFSDFMK+A+RLTI+ G
Sbjct: 692 LYGRLADMFGIEKEEIINHLHFRDAAGVVKHPGEVPFSDFMKAARRLTIIAG 743
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/744 (58%), Positives = 508/744 (68%), Gaps = 83/744 (11%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E EKS+DPQLWHACAGSMVQIP LNSTVFYF QGH EH+ +F + R+PPLI CRV
Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDF-HAPRVPPLILCRVV 60
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFE-DNNLSLNSVGSDSE---SEKPASFAKTLT 118
S+KFLAD+ETDEV+AKI L+P+P N++D E D L L SD EKPASFAKTLT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY+A+PPVQTV AKD+HGE WKFRHIYRGTPRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G SN GS
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRG----------GLGSNAGS--- 227
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVL-EAVALAAS 297
NP+ GFS FLR++E+ + M + G N+ GN GRV+ E V A +
Sbjct: 228 DNPYPGFSGFLRDDESTTTTSKLMMMKRNG--NNDGNAAAT-GRVRVEAVAGSGGACSXV 284
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K FEVVYYPRASTPEFCVKA+ V++AMR W GMR KMAFETEDSSRISWFMGT S+V
Sbjct: 285 DKAFEVVYYPRASTPEFCVKAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAV 344
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
QVADPI WPNSPWRLLQV WDEPDL QNVKRVSPWLV LVSNMP IHLSPFS KK+R+
Sbjct: 345 QVADPIRWPNSPWRLLQVAWDEPDLXQNVKRVSPWLVXLVSNMPTIHLSPFS-XWKKIRI 403
Query: 418 PQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG---- 465
PQ +FPF G +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 404 PQPFEFPFHGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSP 461
Query: 466 -----ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNS 519
++ S + NNKL S +FLSS F P + + +S N+SC LTMGN
Sbjct: 462 SLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNP 515
Query: 520 NQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASS 576
+K + ++K HQF LFGQPI TEQQ+ + + L + + + A
Sbjct: 516 AMVQDKKKSVGSVKTHQFXLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGLXARG 569
Query: 577 DGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
WN S Q GL+TGHCKVF+ESEDVGRTLDLSV+ S
Sbjct: 570 --------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSVIGSV 605
Query: 637 EELYRRLAIMFGI-ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDS 695
+ELYR+LA MF I ER D+++HV Y+DA+G IKR GDEPFSDFMK+ KRLTI M G D+
Sbjct: 606 QELYRKLAEMFHIEERPDLVTHVGYRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDN 665
Query: 696 VGRTWITGMRTPKNGLDASNKTGP 719
V +TWITG+RT +NG+DA + P
Sbjct: 666 VRKTWITGIRTGENGIDALRRLVP 689
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/699 (58%), Positives = 494/699 (70%), Gaps = 45/699 (6%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--IPPL 56
MKEV E+ +DPQLWHACAG MVQ+PP+ S V+YFPQGHAEH+ G + +P L
Sbjct: 1 MKEVAEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGARALPSL 60
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
+ C V+ ++FLAD ETDEV+AKI+LVP+ E++F + + SV EK +SFAKT
Sbjct: 61 VLCSVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEF--SVDPADAREKLSSFAKT 118
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHIYRGTPRRH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 178
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRR K+ GG E SGWN+
Sbjct: 179 LLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMEC-MSGWNAPG--- 234
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+G S FL++EE KM + S+G G RG G +VK V+ A +LAA
Sbjct: 235 -----YGALSAFLKDEEGKM-------MKSHG-----GYMRGRG-KVKITDVVNAASLAA 276
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
SG+PFEVVYYPRASTPEF VKA++V+ AMR W GMRFKMAFETEDSSRISWFMGTI+S
Sbjct: 277 SGQPFEVVYYPRASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIAS 336
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
QVADPI WPNSPWRLLQV WDEPDLLQNVK V+PWLVE+VS++P IHL PFSP RKKLR
Sbjct: 337 AQVADPIRWPNSPWRLLQVAWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLR 396
Query: 417 LPQQLDFPFDGQFTMPLFSGNPLGPSS---PLCCLSDNTSAGIQGARHAQFGISSSDFHV 473
+P DFPFDGQ P+F GNPLGPS+ L C SD AGIQGARHAQFG+ +D +
Sbjct: 397 VPHHPDFPFDGQLLNPIFHGNPLGPSNGGGALRCFSDIAPAGIQGARHAQFGLPLTDRQL 456
Query: 474 NN----KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI 529
N Q G F L TP G + E++SC+LT+G + + E+S++
Sbjct: 457 NKLHLGLFQGGGFKRRLDAITPPCPISRGFVIGSAPVDESVSCVLTIG-TPRAAERSDDR 515
Query: 530 KKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISI 589
KK +LFG+PI TEQQ+S S + +S +SSDG K SDGSGS+ S
Sbjct: 516 KKPHLMLFGKPILTEQQMSSRGSRETLSPEATGNSSDGSVQKTGNVSDGSGSSICIGSSS 575
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI 649
+S + + GHCKVF+ESEDVGRT+DLSV SYEELY +LA MFGI
Sbjct: 576 RGREASRLGFE---------FEAGHCKVFVESEDVGRTIDLSVFGSYEELYGQLADMFGI 626
Query: 650 ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
E+++++SH+ Y+DA+GA+KRTGDEPF DFMK A+RLTI+
Sbjct: 627 EKAEVMSHLCYRDAAGAVKRTGDEPFCDFMKVARRLTIV 665
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 771 bits (1992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/729 (56%), Positives = 509/729 (69%), Gaps = 49/729 (6%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
+E ++ +DPQLWHACAG MVQ+P ++S V+YFPQGHAEH+ G V+ P+ R+P L+ CRV
Sbjct: 5 RESDRCLDPQLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQGPVDLPAG-RVPALVLCRV 63
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++++F+AD +TDEV+AKI+L P+ NE + D+ + + E +KPASFAKTLTQSD
Sbjct: 64 AAVRFMADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQE-DKPASFAKTLTQSD 122
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHLLTTG
Sbjct: 123 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTG 182
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFVNQKKLVAGDSIVF+R ++GDLCVGIRRAKKG GG E+ + G
Sbjct: 183 WSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHH--HHQQPPPPQGGG 240
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+ GFS FLR EE+ G M + ++ RV+PE V+EA LA SG+PF
Sbjct: 241 YAGFSMFLRGEED----GGKMMAAAATRGKAARV------RVRPEEVVEAANLAVSGQPF 290
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT+S+V VAD
Sbjct: 291 EVVYYPRASTPEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVAD 350
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH---LSPFSPARKKLRLP 418
PI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMPVIH +PFSP RKKL +P
Sbjct: 351 PIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHHLTATPFSPPRKKLCVP 410
Query: 419 QQLDFPFDGQFTMPLFSGNPL----GPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVN 474
+ P +GQF P+F G+PL G P+C D T AGIQGARHAQFGIS SD H+
Sbjct: 411 LYPELPLEGQFPAPMFHGSPLLGRGGAGGPMCYFPDGTPAGIQGARHAQFGISLSDLHL- 469
Query: 475 NKLQSGLFLSSLQR--------FTPNSRDFDG-ILTSHTNSSENLSCLLTMGNSN----- 520
NKLQ GL L R R G I+ H + +++SCLLT+G
Sbjct: 470 NKLQPGLSPHGLHRQLDHGVQVQVQQPRIAAGLIVGGHPAARDDVSCLLTIGTPKSKKPP 529
Query: 521 QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGH---SDKVKASSD 577
+++K+ Q +LFG+ I TEQQIS +VV + KS SD +++ ++SD
Sbjct: 530 SDVKKASTAAAPQLMLFGKAILTEQQISLG-GGNVVPALAKKSPSDDDDDVAERTVSNSD 588
Query: 578 GS--GSTHEQRISIEKSSSSEFFW-----NRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
S G +++ S ++ W N +E L GHCKVF++SEDVGRTLDL
Sbjct: 589 VSSPGRSNQDGTSSGGGPAARACWQEEECNNRAAGSEDDL-LGHCKVFMQSEDVGRTLDL 647
Query: 631 SVLSSYEELYRRLAIMFGIERSDMLSHVLYQ-DASGAIKRTGDEPFSDFMKSAKRLTILM 689
S ++SYEELY+RLA MFG++++++ SHV Y+ DASGA+K GDEPFS+F K+A+RLTIL
Sbjct: 648 SAVASYEELYQRLADMFGVDKAELTSHVFYRDDASGALKHPGDEPFSEFTKTARRLTILT 707
Query: 690 GSGSDSVGR 698
SDS+ R
Sbjct: 708 DESSDSLAR 716
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/701 (57%), Positives = 487/701 (69%), Gaps = 83/701 (11%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-----VNFPSSSRI 53
MKE E+ +DPQLWHACAG MVQ+PP+ S V+YFPQGHAEH+ G + + +
Sbjct: 1 MKEAGEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPL 60
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES--EKPA 111
PPL+ C V+ ++FLAD ETDEV+AKI+LVP E++F + G D E EK +
Sbjct: 61 PPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPR----EFGIDPEDAREKLS 116
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHI+RG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
TPRRHLLTTGWS FVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E SGWN+
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMEC-ISGWNA 235
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
+G S FL++EE K+ + G RG G +V+ V+EA
Sbjct: 236 PV--------YGALSAFLKDEEGKITKG------------PGGYMRGRG-KVEITDVVEA 274
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
+LAASG+PFEVVYYPRASTPEF VKA++V+ AMR W GMRFKMAFETEDSSRISWFM
Sbjct: 275 ASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFM 334
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI+S QVAD I WPNSPWRLLQV+WDEPDLLQNVK V+PWLVE+VS++P IHL FSP
Sbjct: 335 GTIASAQVADTIRWPNSPWRLLQVSWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGTFSPP 394
Query: 412 RKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSSD 470
RKKLR+ Q DFPF+GQ P+F GNPLGPS SPL C SD AGIQGARHAQFG+ +D
Sbjct: 395 RKKLRVAQHPDFPFEGQLLNPIFHGNPLGPSNSPLRCFSDIAPAGIQGARHAQFGLPLTD 454
Query: 471 FHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIK 530
+ +N Q L + L TP R G + S +SE++SCLLT+G + Q EKS++IK
Sbjct: 455 YQLN---QLHLGFNRLGAMTPTPRISKGFVISSAPASESVSCLLTIG-TPQATEKSDDIK 510
Query: 531 KHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIE 590
+ +LFG+PI TEQQ+ S +G S KAS
Sbjct: 511 RPHIMLFGKPILTEQQMDSG------------GSREGLSQDRKAS--------------- 543
Query: 591 KSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE 650
E GL+ GHCKVF+ESEDVGRT+DLSV SYEELY +LA MFGIE
Sbjct: 544 ----------------ELGLEDGHCKVFMESEDVGRTIDLSVFGSYEELYGQLADMFGIE 587
Query: 651 RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGS 691
+++++ H+ Y+DA+GA++ TG+EPF+DFMK A+RLTI+ G+
Sbjct: 588 KAEIMRHLCYRDAAGAVRHTGEEPFNDFMKVARRLTIIEGT 628
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/702 (56%), Positives = 490/702 (69%), Gaps = 54/702 (7%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSS 63
EK +DPQLWHACAG MV++PP+NS VFYFPQGHAE++ V+F + IPP++ CRV +
Sbjct: 12 TEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF-GNLPIPPMVLCRVLA 70
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+K++AD+E+DEV+AK++L+P+ +E + +S G +S SEK SFAKTLTQSDAN
Sbjct: 71 IKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDAN 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
NGGGFSVPRYCAETIFPRLDY A+PPVQT++AKDVHG++WKFRHIYRGTPRRHLLTTGWS
Sbjct: 131 NGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWS 190
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK-GIGGGNEYPSSGWNSNNGSCVTGNPF 242
FVNQKKLVAGDSIVF+RA++GDLCVGIRRAK+ GIG G EY S+GWN GSC
Sbjct: 191 NFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEY-SAGWNPIGGSC------ 243
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
G+S LRE+E+ R N +L G+V E V+EA LA SG+PFE
Sbjct: 244 -GYSSLLREDESNSLRRSNCSLAD------------RKGKVTAESVIEAATLAISGRPFE 290
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VVYYPRAST EFCVKA +AAMR+ W GMRFKMAFETEDSSRISWFMGT+S+V V+DP
Sbjct: 291 VVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDP 350
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
I WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+ FSP RKK+RLPQ D
Sbjct: 351 IRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPD 410
Query: 423 F-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQFGISSSDFH---VNN 475
+ +P F NPL SSPL + DN G+QGAR H +G+SSSD H +N
Sbjct: 411 YNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNR 470
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
S + R+ D +E C LTMG + N KS KK +
Sbjct: 471 PPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTPCNDTKS---KKSHIV 520
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFG+ I E+Q+S S D + ++ + SG +++ ++ + SSS
Sbjct: 521 LFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSGGSNQNGVAGREFSSS 566
Query: 596 EFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEEL R+L+ MFGI++S+M
Sbjct: 567 DEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEM 626
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
LS VLY+DASGAIK G+EPFS+F+K+A+RLTIL GS+SV
Sbjct: 627 LSSVLYRDASGAIKYAGNEPFSEFLKTARRLTILTEQGSESV 668
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/702 (56%), Positives = 490/702 (69%), Gaps = 54/702 (7%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSS 63
EK +DPQLWHACAG MV++PP+NS VFYFPQGHAE++ V+F + I P++ CRV +
Sbjct: 12 TEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF-GNLPIHPMVLCRVLA 70
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+K++AD+E+DEVYAK++L+P+ +E + +S G +S SEK SFAKTLTQSDAN
Sbjct: 71 IKYMADAESDEVYAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDAN 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
NGGGFSVPRYCAETIFPRLDY A+PPVQT++AKDVHG++WKFRHIYRGTPRRHLLTTGWS
Sbjct: 131 NGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWS 190
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK-GIGGGNEYPSSGWNSNNGSCVTGNPF 242
FVNQKKLVAGDSIVF+RA++GDLCVGIRRAK+ GIG G EY S+GWN GSC
Sbjct: 191 NFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEY-SAGWNPIGGSC------ 243
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
G+S LRE+E+ R N +L G+V E V+EA LA SG+PFE
Sbjct: 244 -GYSSLLREDESNSLRRSNCSLAD------------RKGKVTAESVIEAATLAISGRPFE 290
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VVYYPRAST EFCVKA +AAMR+ W GMRFKMAFETEDSSRISWFMGT+S+V V+DP
Sbjct: 291 VVYYPRASTSEFCVKAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDP 350
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
I WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+ FSP RKK+RLPQ D
Sbjct: 351 IRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPD 410
Query: 423 F-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQFGISSSDFH---VNN 475
+ +P F NPL SSPL + DN G+QGAR H +G+SSSD H +N
Sbjct: 411 YNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNR 470
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
S + + R+ D +E C LTMG + N +S KK +
Sbjct: 471 PPPPPPPSSLPRSPSLGLRNID-------TKNEKGFCFLTMGTTPCNDTES---KKSHIV 520
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFG+ I E+Q+S S D + ++ + SG +++ ++ + SSS
Sbjct: 521 LFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSGGSNQNGVAGRELSSS 566
Query: 596 EFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEEL R+L+ MFGI++S+M
Sbjct: 567 DEGSPCSNKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEM 626
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
LS VLY+DASGAIK G+EPFS+F+K+A+RLTIL GS+SV
Sbjct: 627 LSSVLYRDASGAIKYAGNEPFSEFLKTARRLTILTEQGSESV 668
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 736 bits (1900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/711 (56%), Positives = 481/711 (67%), Gaps = 79/711 (11%)
Query: 1 MKEVE-----KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--- 52
MKEV + +DPQLWHACAG MVQ+P S V+YF QGHAEH+ G +++
Sbjct: 21 MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 80
Query: 53 ---IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFE--DNNLSLNSVGSDSES 107
+PPL+ CRV ++FLAD ++DEVYAKI+L P+ E +F D L + G +E
Sbjct: 81 PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 140
Query: 108 --EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
EKP SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHG +WKF
Sbjct: 141 SPEKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKF 200
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYP 225
RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E
Sbjct: 201 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMEC- 259
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
SGWN+ G GGFS FL+EEE+K+ + G V+
Sbjct: 260 MSGWNA------PGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGK-----------VRM 302
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
V+EA +LA+SG+PFEV YYPRASTP+F VKA++V+AAMR+ W GMRFKMAFETEDSS
Sbjct: 303 ADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSS 362
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL 405
RISWFMGTISSVQVADP WPNSPWRLLQVTWDEPDLLQNVK VSPWLVELVS++P IHL
Sbjct: 363 RISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQNVKCVSPWLVELVSSIPPIHL 422
Query: 406 SPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQF 464
PFS RKKLR+P DFPF+G P+F GNPLGPS SPLCC D AGIQGARHAQF
Sbjct: 423 GPFSSPRKKLRVPPHPDFPFEGHLLNPIFHGNPLGPSNSPLCCYPDTAPAGIQGARHAQF 482
Query: 465 GISSSDFHVNNKLQSGLFLSS----LQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
G+ +D H NKL GL S L TP SR G + T
Sbjct: 483 GLPLTD-HQLNKLHLGLLHSGSFNRLDAITPPSRISKGFVKDDT---------------- 525
Query: 521 QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQ-VLGKSSSDGHSDKVKASSDGS 579
+ + I TEQQI+ S S + +S V G S+ +G++ K +SDGS
Sbjct: 526 ------------PYNAVWKGIFTEQQITSSGSTETLSPGVTGNSAPNGNAHKTGNASDGS 573
Query: 580 GSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEEL 639
GS+ I I SS + + ++ GL+ GHCKVF+ESEDVGRT+DLSV SYEEL
Sbjct: 574 GSS----ICIGFSS-------QGHEASDLGLEAGHCKVFMESEDVGRTIDLSVFGSYEEL 622
Query: 640 YRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
Y RLA MFGIE+ ++++H+ + DA+G +K G+ PFSDFMK+A+RLTI+ G
Sbjct: 623 YGRLADMFGIEKEEIINHLHFHDAAGVVKHPGEVPFSDFMKAARRLTIIAG 673
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 730 bits (1884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/712 (55%), Positives = 483/712 (67%), Gaps = 69/712 (9%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV--NFPSSSRIPPLIFCRVSSLK 65
+DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G + P+ R+P L+ CRV +++
Sbjct: 21 VDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-RVPALVLCRVDAVR 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLAD +TDEV A+++L P+ NE D D + + +KPASFAKTLTQSDANNG
Sbjct: 80 FLADPDTDEVLARVRLAPVRPNEPDHAD------AAAPGAREDKPASFAKTLTQSDANNG 133
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHLLTTGWS F
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAF 193
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG-IGGGNEYPSSGWNSNNGSCVTGNPFGG 244
VNQK+LVAGDSIVF+R +GDLCVGIRRAKKG IGGG E+P + G + G
Sbjct: 194 VNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPH---HQPPDGGGYGYGYAG 250
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
FS FLR EE+ A G + + V+PE V+EA LAASG+PFEVV
Sbjct: 251 FSTFLRGEEDDAAARGKVRV-----------------LVRPEEVVEAANLAASGQPFEVV 293
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT+++VQVADPI
Sbjct: 294 YYPRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIR 353
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFS-PARKKLRLPQQLD 422
WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVS+ P I HL+PFS P+RKKL +P
Sbjct: 354 WPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPL--- 410
Query: 423 FPFDGQFTMPLFSGNPLGPS--SPLCCLSDNTS--AGIQGARHAQFGISSSDFHVNNKLQ 478
+P Q P+F G+PL P+ D + AGIQGARHAQFGIS D H +LQ
Sbjct: 411 YPEGHQLPAPMFHGSPLVGRGVGPMRYFPDGGTPPAGIQGARHAQFGISLPDLHHLTRLQ 470
Query: 479 SGLF-----LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ----NLEKSENI 529
S L L R G++ H + +++SCLLT+G + +++ +
Sbjct: 471 SSLSPHAHGLRHQLDHGARPRIAGGLIVGHPAARDDISCLLTIGTAPHKKPSDVKSAAAA 530
Query: 530 KKHQFLLFGQPIRTEQQIS----------HSCSDDVVSQVLGKSSSDGHSDKVKASSDGS 579
Q +LFG+PI TEQQIS S SDD + + +SD + S
Sbjct: 531 PAPQLMLFGKPILTEQQISLGFRPLPAPKKSPSDDAAET---ERTVSNNSDASSPAGTAS 587
Query: 580 GSTHEQRISIEKSSSSEFFWNRSFQVTESGLDT---GHCKVFLESEDVGRTLDLSVLSSY 636
GST SI + S N++ + D GHCKVF++SEDVGRTLDLS ++SY
Sbjct: 588 GST----PSISGGAPSSCQDNKAAATATATDDDDLLGHCKVFMQSEDVGRTLDLSAVASY 643
Query: 637 EELYRRLAIMFGIERSDMLSHVLYQD-ASGAIKRTGDEPFSDFMKSAKRLTI 687
EELY+RLA MFG++R+++ SHV Y+D ASGA+K GDEPFS+F K+A+RLTI
Sbjct: 644 EELYQRLADMFGVDRAELTSHVFYRDGASGALKHAGDEPFSEFTKTARRLTI 695
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 722 bits (1863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/727 (54%), Positives = 490/727 (67%), Gaps = 56/727 (7%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
M +K +D QLWHACAG ++Q+P +NS V YFPQGH EH+ G+V+F ++RIP +I CR
Sbjct: 8 MMNHDKHLDSQLWHACAGGLIQLPTINSKVVYFPQGHTEHAQGNVDF-GNARIPSIIPCR 66
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
VS ++ +AD ETDEV+AKIKL P+ NE +D ED+ L N + S +KP SFAKTLT
Sbjct: 67 VSGIRHMADPETDEVFAKIKLSPLANNEFNLDNEDDLLIHNELKS---QDKPTSFAKTLT 123
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY+ +PPVQT++AKDVHGEIWKFRHIYRGTPRRHLL
Sbjct: 124 QSDANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTPRRHLL 183
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS+FVNQKKLVAGDSIVFLRA+ GDLC+G+RRAK+GIG G +Y S GWN N +
Sbjct: 184 TTGWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDY-SPGWNPTN----S 238
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G+ G+S ++RE E ++ R NS+GN GRVK E V+EA LAASG
Sbjct: 239 GSSLVGYSDYMRESEGRLGRR-----------NSNGNL---SGRVKVESVIEAAMLAASG 284
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+ FE+VYYP A TPEF VKAS++++AM++HW MRFKM FETEDSSRISWFMGT+SS+Q
Sbjct: 285 QSFEIVYYPCAGTPEFVVKASSLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQ 344
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
ADPI WP+SPWR+LQVTWDEPDLLQNVK V+PWLVE+V NMP IH+SPFSP RKK R P
Sbjct: 345 AADPIRWPDSPWRMLQVTWDEPDLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPRFP 404
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDN-TSAGIQGARHAQFGISSSDFHVNNKL 477
Q D G MP FS N ++PL ++ N AGIQGARH QFG+SS + + +KL
Sbjct: 405 LQADSSGFGHLPMPSFSTNIFDTTNPLQGITANKIPAGIQGARHTQFGLSSPNLQI-SKL 463
Query: 478 QSGLFLSSLQRF-----TPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ----------- 521
G F L+ P R D + + + +N S L M N Q
Sbjct: 464 LPGQFSPGLKHLDDATPLPGIRGED--IFAGMKNPDNCSLWLPMRNHIQSSKESSKESSK 521
Query: 522 -NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
+ ++S+ K +LFGQ I QQ S+SCS D + ++SD + +K SDGSG
Sbjct: 522 ESSKESKETKPAHIILFGQLIFPNQQNSNSCSGDTM------NASDANQEKASNLSDGSG 575
Query: 581 STHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELY 640
+ +Q S+E SS + LDT +CKVF+E E+VG LDLS L SYEELY
Sbjct: 576 LSSQQNGSLENSSEGGSTLYNGQDKSGLSLDTVYCKVFVELENVGCNLDLSSLRSYEELY 635
Query: 641 RRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGS----DSV 696
R+L M G+ S+ML+ VLYQD GA K G+EPFS+F+K A++LTI S S DS
Sbjct: 636 RKLGNMVGLGSSEMLNSVLYQDTLGATKHVGEEPFSEFLKKAQKLTISTDSRSRDNIDSR 695
Query: 697 GRTWITG 703
R I G
Sbjct: 696 SRDKIRG 702
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/681 (56%), Positives = 472/681 (69%), Gaps = 54/681 (7%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSS 63
EK +DPQLWHACAG MV++PP+NS VFYFPQGHAE++ V+F + IPP++ CRV +
Sbjct: 12 TEKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDF-GNLPIPPMVLCRVLA 70
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+K++AD+E+DEV+AK++L+P+ +E + +S G +S SEK SFAKTLTQSDAN
Sbjct: 71 IKYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNSEKTPSFAKTLTQSDAN 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
NGGGFSVPRYCAETIFPRLDY A+PPVQT++AKDVHG++WKFRHIYRGTPRRHLLTTGWS
Sbjct: 131 NGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWS 190
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK-GIGGGNEYPSSGWNSNNGSCVTGNPF 242
FVNQKKLVAGDSIVF+RA++GDLCVGIRRAK+ GIG G EY S+GWN GSC
Sbjct: 191 NFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEY-SAGWNPIGGSC------ 243
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
G+S LRE+E+ R N +L G+V E V+EA LA SG+PFE
Sbjct: 244 -GYSSLLREDESNSLRRSNCSLAD------------RKGKVTAESVIEAATLAISGRPFE 290
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VVYYPRAST EFCVKA +AAMR+ W GMRFKMAFETEDSSRISWFMGT+S+V V+DP
Sbjct: 291 VVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDP 350
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
I WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+ FSP RKK+RLPQ D
Sbjct: 351 IRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPD 410
Query: 423 F-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQFGISSSDFH---VNN 475
+ +P F NPL SSPL + DN G+QGAR H +G+SSSD H +N
Sbjct: 411 YNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNR 470
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
S + R+ D +E C LTMG + N KS KK +
Sbjct: 471 PPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTPCNDTKS---KKSHIV 520
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFG+ I E+Q+S S D + ++ + SG +++ ++ + SSS
Sbjct: 521 LFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSGGSNQNGVAGREFSSS 566
Query: 596 EFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDM 654
+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEEL R+L+ MFGI++S+M
Sbjct: 567 DEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEM 626
Query: 655 LSHVLYQDASGAIKRTGDEPF 675
LS VLY+DASGAIK G+EPF
Sbjct: 627 LSSVLYRDASGAIKYAGNEPF 647
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/701 (55%), Positives = 482/701 (68%), Gaps = 77/701 (10%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
EK +DPQLWHACAG MV++PP+NS VFYFPQGHAE++ V+F + IPP++ CRV ++
Sbjct: 13 EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDHVDF-KNLPIPPMVLCRVLAI 71
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
K++AD E+DEV+AK+KL+P+ N+ ++ D S N +GS++ SEK SFAKTLTQSDANN
Sbjct: 72 KYMADPESDEVFAKLKLIPLKDNDHEYRDGEES-NGLGSNN-SEKTPSFAKTLTQSDANN 129
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPRYCAETIFPRLDY A+PPVQT++AKDVHGE+WKFRHIYRGTPRRHLLTTGWS
Sbjct: 130 GGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTTGWSN 189
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGN--EYPSSGWNSNNGSCVTGNPF 242
FVNQKKLVAGDSIVF+RA++GDLCVGIRRAK+G G N EY S+GW NP
Sbjct: 190 FVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEY-SAGW----------NPI 238
Query: 243 GG-FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
GG +S LR++E + SS + G+V E V+EA LA SG+ F
Sbjct: 239 GGSYSSLLRDDERR----------------SSSSLADRKGKVTAESVVEAAKLAVSGRGF 282
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
EVVYYPRAS+ EFCVKA +AAMR+ W GMRFKMAFETEDSSRISWFMGT+S+V V+D
Sbjct: 283 EVVYYPRASSSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSD 342
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM-PVIHLSPFSPARKKLRLPQQ 420
P+ WPNSPWRLLQV WDEPDLLQ VKRV+PWLVELVSN+ P+I FSP RKK+RLPQ
Sbjct: 343 PVRWPNSPWRLLQVAWDEPDLLQYVKRVNPWLVELVSNVHPII--PSFSPPRKKMRLPQH 400
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQFGISSSDFH--VNN 475
D ++ + ++P F+ NPL SSPL + DN G+QGAR H +G+SSSD H N
Sbjct: 401 PD--YNTRISVPSFASNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLN 458
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
+ S+L P F I + +E C LTMG S N +S KK +
Sbjct: 459 RPHPPPPSSTLS--VPPPLGFRNI----DSKNEKGFCFLTMGTSPCNDTES---KKSHIV 509
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFG+ I E+Q S+K + SS GS + SSS
Sbjct: 510 LFGKLILPEEQKG--------------------SEKTQLSSGGSNQN-----CVAGSSSE 544
Query: 596 EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDML 655
E + GL+TGHCKVF+ES+DVGRTLDLSVL SYEEL +L+ MFGI++S+ML
Sbjct: 545 EGSPCSNKAHDGLGLETGHCKVFMESDDVGRTLDLSVLGSYEELGMKLSDMFGIQKSEML 604
Query: 656 SHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
S VLY+DASGA+K G+EPFS+F+K+A+RLTIL GS+SV
Sbjct: 605 SSVLYRDASGAVKYPGNEPFSEFLKTARRLTILSEQGSESV 645
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/712 (54%), Positives = 474/712 (66%), Gaps = 79/712 (11%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV--NFPSSSRIPPLIFCRVSSLK 65
+DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G + P+ R+P L+ CRV +++
Sbjct: 21 VDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-RVPALVLCRVDAVR 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLAD +TDEV A+++L P+ NE D D + + +KPASFAKTLTQSDANNG
Sbjct: 80 FLADPDTDEVLARVRLAPVRPNEPDHAD------AAAPGAREDKPASFAKTLTQSDANNG 133
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHLLTTGWS F
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAF 193
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK-GIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
VNQK+LVAGDSIVF+R +GDLCVGIRRAKK GIGGG E+P + G + G
Sbjct: 194 VNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPH---HQPPDGGGYGYGYAG 250
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
FS FLR EE+ A G + + V+PE V+EA LAASG+PFEVV
Sbjct: 251 FSTFLRGEEDDAAARGKVRV-----------------LVRPEEVVEAANLAASGQPFEVV 293
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT+++VQVADPI
Sbjct: 294 YYPRASTPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIR 353
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFS-PARKKLRLPQQLD 422
WPNSPWR LLQNVKRVSPWLVELVS+ P I HL+PFS P+RKKL +P
Sbjct: 354 WPNSPWR----------LLQNVKRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPL--- 400
Query: 423 FPFDGQFTMPLFSGNPLGPS--SPLCCLSDNTS--AGIQGARHAQFGISSSDFHVNNKLQ 478
+P Q P+F G+PL P+ D + AGIQGARHAQFGIS D H +LQ
Sbjct: 401 YPEGHQLPAPMFHGSPLVGRGVGPMRYFPDGGTPPAGIQGARHAQFGISLPDLHHLTRLQ 460
Query: 479 SGLF-----LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ----NLEKSENI 529
S L L R G++ H + +++SCLLT+G + +++ +
Sbjct: 461 SSLSPHAHGLRHQLDHGARPRIAGGLIVGHPAARDDISCLLTIGTAPHKKPSDVKSAAAA 520
Query: 530 KKHQFLLFGQPIRTEQQIS----------HSCSDDVVSQVLGKSSSDGHSDKVKASSDGS 579
Q +LFG+PI TEQQIS S SDD + + +SD + S
Sbjct: 521 PAPQLMLFGKPILTEQQISLGFRPLPAPKKSPSDDAAET---ERTVSNNSDASSPAGTAS 577
Query: 580 GSTHEQRISIEKSSSSEFFWNRSFQVTESGLDT---GHCKVFLESEDVGRTLDLSVLSSY 636
GST SI + S N++ + D GHCKVF++SEDVGRTLDLS ++SY
Sbjct: 578 GST----PSISGGAPSSCQDNKAAATATATDDDDLLGHCKVFMQSEDVGRTLDLSAVASY 633
Query: 637 EELYRRLAIMFGIERSDMLSHVLYQD-ASGAIKRTGDEPFSDFMKSAKRLTI 687
EELY+RLA MFG++R+++ SHV Y+D ASGA+K GDEPFS+F K+A+RLTI
Sbjct: 634 EELYQRLADMFGVDRAELTSHVFYRDGASGALKHAGDEPFSEFTKTARRLTI 685
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 692 bits (1786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/698 (54%), Positives = 447/698 (64%), Gaps = 129/698 (18%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE++K +DPQLWHACAG MV +P LNS V YFPQGHAEH+ G+V+F + RIPPL+ CR
Sbjct: 8 MKELDKCLDPQLWHACAGGMVHMPSLNSRVVYFPQGHAEHAYGNVDF-GNPRIPPLVLCR 66
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
VS++K+LAD E+DE EKPASFAKTLTQS
Sbjct: 67 VSAVKYLADPESDEA-------------------------------PEKPASFAKTLTQS 95
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANN GG
Sbjct: 96 DANN-GG----------------------------------------------------- 101
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+K LVAGDSIVFLRA++GDLCVGIRRAK+ G G E
Sbjct: 102 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRA-GCGPE----------------- 143
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
G+S FLRE+EN+ +S+ RG G RV+ E V EA LAA+G+P
Sbjct: 144 ---GYSGFLREDENRPILT-----------HSNAGFRGKG-RVRAESVAEAATLAANGQP 188
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F +VYYPRASTPEFCVKAS+V+AAM++ W GM+FKMAFET+DSSRISWFMG ISSV V
Sbjct: 189 FVIVYYPRASTPEFCVKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVN 248
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DPI WPNSPWRLLQVTWDEPDLLQNVKRV+PWLVELVS++P IHLSPFSP RKKLRL QQ
Sbjct: 249 DPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPWLVELVSHVPSIHLSPFSPPRKKLRLQQQ 308
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
+FP GQ MP FS N L PSSPLCC+SDN AGIQGARHAQFG+SSSD H NKLQ G
Sbjct: 309 SEFPLVGQIPMPSFSSNALRPSSPLCCISDNIPAGIQGARHAQFGLSSSDLHF-NKLQLG 367
Query: 481 LFLSSLQ----RFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
LF LQ + P S G S+ ++EN+SCLLT+GNS QN +K+ IK F L
Sbjct: 368 LFPLGLQQQLDQTAPPSSILSGNTMSNHENNENISCLLTIGNSTQNSKKNNEIKAPYFFL 427
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
FGQPI EQQ+S SCS D G SSSDG+ +K SDGSGS Q E SS
Sbjct: 428 FGQPILIEQQVSQSCSGDTA----GISSSDGNPEKTPNFSDGSGSAFHQNGPQESSSDEG 483
Query: 597 FF-WNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDML 655
W + Q T GL+TGHCKVF+ESEDVGRTLDLS+L SYEELYR+LA MFGIER++ML
Sbjct: 484 LLTWYKDHQKTNLGLETGHCKVFMESEDVGRTLDLSILGSYEELYRKLANMFGIERAEML 543
Query: 656 SHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGS 693
S+VLY+D +G +K GD PF +F+K+A+RLTIL S +
Sbjct: 544 SNVLYRDEAGIVKHIGDAPFGEFLKTARRLTILADSAA 581
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/714 (54%), Positives = 480/714 (67%), Gaps = 67/714 (9%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLG-SVNFPSSSRIPPLIFCRVS 62
E+ +D QLW ACAG M +PP+ + V+YFPQGHAEH+LG + S++R+P L+ CRV+
Sbjct: 14 AERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAARVPALVPCRVA 73
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
S++++AD +TDEV+A+I+LVP+ A E D ++ + + E EKPASFAKTLTQSDA
Sbjct: 74 SVRYMADPDTDEVFARIRLVPLRAAE----DGDVEEDGAAAGEEHEKPASFAKTLTQSDA 129
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
NNGGGFSVPRYCAETIFPRLDY ADPPVQTVVAKDVHG W FRHIYRGTPRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGW 189
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS----GWNSNNGSCVT 238
STFVNQKKLVAGDSIVFLR GDL VGIRRAK+G GG GW+
Sbjct: 190 STFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQ------- 242
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+GG M N+ + G G+V+ E V+EA LA+ G
Sbjct: 243 ---YGGL----------------MRGNASPCAAAKGR-----GKVRAEDVVEAARLASGG 278
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+PFEVVYYPRASTPEFCV+A+AV+AAMRV W GMRFKMAFETEDSSRISWFMGT++SVQ
Sbjct: 279 QPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQ 338
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP IHLS FSP RKK R+P
Sbjct: 339 VADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLSSFSPPRKKPRIP 398
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSS-----------PLCCLSDNTSAGIQGARHAQFGIS 467
+FPF+GQ P F NPL P +S AGIQGARHAQFG S
Sbjct: 399 AYPEFPFEGQLLNPAFPPNPLAHGHHHYHHNHPSFFPFPDVS--APAGIQGARHAQFGPS 456
Query: 468 SSDFHVNNKLQSGLFLSSLQR---FTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLE 524
SD H+ + LQS L L+R P S I T T S + L+MG +
Sbjct: 457 LSDLHLTH-LQSSLMYPGLRRPDHVGPTSIPPPRISTDLTMGSSPPARALSMGA-----K 510
Query: 525 KSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHE 584
K ++ K +LFGQ I TE+Q+S S + + G SS + +++ K +S+GSGS
Sbjct: 511 KPDDAKPPGLMLFGQRILTERQMSLSGTTSPAAT--GNSSLNWNTE--KGASEGSGSGVI 566
Query: 585 QRISIEKSSSSEFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRL 643
Q + +SS W R + V+E GL+ G CKVF+ES+ VGR LDLS L+S+E+LY RL
Sbjct: 567 QNSPTDNTSSERLQWFRENSTVSELGLEPGQCKVFIESDTVGRNLDLSSLASFEQLYGRL 626
Query: 644 AIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
+ MF I+ +++ S VLY+ A+G ++ GDEPFS+F+K A+RLTIL +GSD++G
Sbjct: 627 SEMFCIDSAELRSRVLYRGATGEVRHAGDEPFSEFIKLARRLTILTDAGSDNLG 680
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/584 (61%), Positives = 406/584 (69%), Gaps = 102/584 (17%)
Query: 142 LDYTADPPV-QTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 200
+ + ADP +TV+AKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVA
Sbjct: 64 VKFMADPETDETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVA------- 116
Query: 201 RAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNG 260
GD V +R + NG G +R + +A +G
Sbjct: 117 ----GDSIVFLR------------------AENGDLCVG---------IRRAKRGIAGSG 145
Query: 261 NMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASA 320
+PE V+EA LAA+G+PFEVVYYPRASTPEFCVKAS
Sbjct: 146 GGLRGGRRV--------------RPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASG 191
Query: 321 VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEP 380
V++A+R+ W GMRFKM FETEDSSRISWFMGTISSVQVADPI WPNSPWRLLQVTWDEP
Sbjct: 192 VRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEP 251
Query: 381 DLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLG 440
DLLQNVKRVSPWLVELVSNMP+IHLSPFSP RKKLR+PQ DFPFDGQF M FS NPLG
Sbjct: 252 DLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLRIPQHPDFPFDGQFPMSSFSSNPLG 311
Query: 441 PSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGIL 500
SSPLCCL DNT AGIQGARHAQ+GIS SD H+NNKLQSGL
Sbjct: 312 SSSPLCCLPDNTPAGIQGARHAQYGISLSDLHLNNKLQSGL------------------- 352
Query: 501 TSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVL 560
++E++SCLLTMGNS+QNLEKS N K QFLLFGQPI TEQQ+S +CS D VSQVL
Sbjct: 353 ----KNNESISCLLTMGNSSQNLEKSANEKTPQFLLFGQPILTEQQMSRTCSSDAVSQVL 408
Query: 561 GKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLE 620
+ K S+ G F W++ FQ TE GLDTGHCKVF+E
Sbjct: 409 --------TGKKNLSNVG------------------FSWHQGFQTTEIGLDTGHCKVFME 442
Query: 621 SEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMK 680
SEDVGR+LDLSVL SYEELY RLA MFGIERS+ SHVLY+DA+GA+K TGDEPFSDF K
Sbjct: 443 SEDVGRSLDLSVLGSYEELYTRLANMFGIERSETFSHVLYRDATGAVKHTGDEPFSDFTK 502
Query: 681 SAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNKTGPLSIFA 724
AKRLTILM SGS+++GRTWITGMR +NGLD+SNKTGPLSIFA
Sbjct: 503 KAKRLTILMDSGSNNIGRTWITGMRNAENGLDSSNKTGPLSIFA 546
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/79 (64%), Positives = 65/79 (82%), Gaps = 1/79 (1%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE EKS+D QLWHACAG MVQ+P ++S VFYFPQGHAEH+ +V+F ++ RIP L+ CR
Sbjct: 1 MKETEKSLDSQLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPALVLCR 60
Query: 61 VSSLKFLADSETDE-VYAK 78
V+++KF+AD ETDE V AK
Sbjct: 61 VAAVKFMADPETDETVIAK 79
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/501 (67%), Positives = 397/501 (79%), Gaps = 35/501 (6%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
++ EK +D QLWHACAG MVQ+PPLNS VFYFPQGHAEH+ G+V+F +I +I C+
Sbjct: 15 LRVTEKCLDSQLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDF-GRCQISAMIPCK 73
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNS---VGSDSESEKPASFAKTL 117
VS++K+LAD ETDEVYAKI+L+P+ ++ E++ + G++S+ EKPASFAKTL
Sbjct: 74 VSAIKYLADPETDEVYAKIRLIPLIDRDVFLENSGDDCDDGLYNGAESQ-EKPASFAKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
TQSDANNGGGFSVPRYCAETIFPRLDY+A+PPVQT++AKDVHGE WKFRHIYRGTPRRHL
Sbjct: 133 TQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FVNQKKLVAGDSIVFLRA +GDLCVGIRRAK+GIGGGNE PS GWNS
Sbjct: 193 LTTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPS-GWNS------ 245
Query: 238 TGNPFGGFSC-FLREEENK-MARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
FGG++ FLRE+E+K M RNGN + N +V+ E V++A LA
Sbjct: 246 ----FGGYAAGFLREDESKLMRRNGNGD---------------NKSKVRVESVIQAATLA 286
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
A+G+PFE+VYYPRASTPEFCV+ASAV+AAM++ W GMRFKM FETEDSSRISWFMGTIS
Sbjct: 287 ANGQPFEIVYYPRASTPEFCVRASAVRAAMQIQWCPGMRFKMPFETEDSSRISWFMGTIS 346
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
SVQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELV+NMP +HLSPFSP RKKL
Sbjct: 347 SVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVANMPAVHLSPFSPPRKKL 406
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
R+PQ DF GQ MP F+ N L +SPLCC+SDN +A IQGARHAQFG+SS+D H+ N
Sbjct: 407 RIPQTPDFSLIGQLQMPSFTSNTLNLNSPLCCVSDNITARIQGARHAQFGLSSADLHI-N 465
Query: 476 KLQSGLFLSSLQRFT-PNSRD 495
KLQSG +S Q T NS D
Sbjct: 466 KLQSGSVSASHQTTTLENSSD 486
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 10/154 (6%)
Query: 552 SDDVVSQV-------LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQ 604
SD++ +++ G SS+D H +K+++ GS S Q ++E SS +
Sbjct: 440 SDNITARIQGARHAQFGLSSADLHINKLQS---GSVSASHQTTTLENSSDEGSPSYKEHW 496
Query: 605 VTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDAS 664
T+ GL+TGHCKVF+ESEDVGRTLDLSVL SYEELY +LA MF IE SDMLS VLY+DA+
Sbjct: 497 KTDLGLETGHCKVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIENSDMLSSVLYRDAA 556
Query: 665 GAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GAIKRTGDEPFS+F+K+A+RLTIL SGS+++ R
Sbjct: 557 GAIKRTGDEPFSEFLKTARRLTILTDSGSENIAR 590
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/712 (54%), Positives = 477/712 (66%), Gaps = 63/712 (8%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLG-SVNFPSSSRIPPLIFCRVS 62
E+ +D QLW ACAG M +PP+ + V+YFPQGHAEH+LG + S++R+P L+ CRV+
Sbjct: 14 AERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAARVPALVPCRVA 73
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
S++++AD +TDEV+A+I+LVP+ A E D ++ + + E EKPASFAKTLTQSDA
Sbjct: 74 SVRYMADPDTDEVFARIRLVPLRAAE----DGDVEEDGAAAGEEHEKPASFAKTLTQSDA 129
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
NNGGGFSVPRYCAETIFPRLDY ADPPVQTVVAKDVHG W FRHIYRGTPRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGW 189
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS----GWNSNNGSCVT 238
STFVNQKKLVAGDSIVFLR GDL VGIRRAK+G GG GW+
Sbjct: 190 STFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQ------- 242
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+GG M N+ + G G+V+ E ++EA LA G
Sbjct: 243 ---YGGL----------------MRGNASPCAAAKGR-----GKVRAEDLVEAARLANGG 278
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+PFEVVYYPRASTPEFCV+A+AV+AAMRV W GMRFKMAFETEDSSRISWFMGT++SVQ
Sbjct: 279 QPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQ 338
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP I+LS FSP RKK R+
Sbjct: 339 VADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAINLSSFSPPRKKPRIL 398
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSD---------NTSAGIQGARHAQFGISSS 469
+FPF+GQ P F NPL + + AGIQGARHAQFG S S
Sbjct: 399 AYPEFPFEGQLLNPAFPPNPLAHGHHHYHHNHPSFFPFPDVSAPAGIQGARHAQFGPSLS 458
Query: 470 DFHVNNKLQSGLFLSSLQR---FTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKS 526
D H+ + LQS L L+R P S I T T S + L+MG +K
Sbjct: 459 DLHLTH-LQSSLMYPGLRRPDHVGPTSIPPPRISTDLTMGSSPPARALSMGA-----KKP 512
Query: 527 ENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQR 586
++ K +LFGQ I TE+Q+S S + + G SS + +++ K +S+GSGS Q
Sbjct: 513 DDAKPPGLMLFGQRILTERQMSLSGTTSPAAT--GNSSLNWNTE--KGASEGSGSGVIQN 568
Query: 587 ISIEKSSSSEFFWNR-SFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAI 645
+ +SS W R + V+E GL+ G CKVF+ES+ VGR LDLS L+S+E+LY RL+
Sbjct: 569 SPTDNTSSERLQWFRENSTVSELGLEPGQCKVFIESDTVGRNLDLSSLASFEQLYGRLSE 628
Query: 646 MFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
MF I+ +++ S VLY+ A+G ++ GDEPFS+F+K A+RLTIL +GSD++G
Sbjct: 629 MFCIDSAELRSRVLYRGATGEVRHAGDEPFSEFIKLARRLTILTDAGSDNLG 680
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/720 (53%), Positives = 468/720 (65%), Gaps = 67/720 (9%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV----NFPSSSRIPPLIFC 59
E+ +D QLW ACAG M +PP+ S+V+YFPQGHAEH+LG SR+P L+ C
Sbjct: 15 AERCVDRQLWLACAGGMCTVPPVGSSVYYFPQGHAEHALGLAAAGPGVGGLSRVPALLPC 74
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV++++++AD +TDEV+A I+LVP+ D +D+ + + G D E EKPASFAKTLTQ
Sbjct: 75 RVAAVRYMADPDTDEVFAGIRLVPL---RQDVQDDGAA--AAGEDEEHEKPASFAKTLTQ 129
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+ADPPVQTVVAKDVHG WKFRHIYRGTPRRHLLT
Sbjct: 130 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRHLLT 189
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FVN KKLVAGDSIVFLR GDL VGIRRAK+G G E GW N T
Sbjct: 190 TGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGW--ENQQLYTM 247
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
P G GN++ + G G G+V+ E V EA LA SG+
Sbjct: 248 GPMRG--------------GGNVSPSCKG---------GRRGKVRAEDVAEAARLAGSGQ 284
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEVVYYPRASTPEFCV+A+AV+AAMRV W GMRFKMAFETEDSSRISWFMGT++ VQV
Sbjct: 285 PFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQV 344
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL-SPFSPARKKLRLP 418
ADPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP IHL S FSP RKK R+P
Sbjct: 345 ADPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASSFSPPRKKPRIP 404
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDN-------------TSAGIQGARHAQFG 465
+FPF+GQ P F N + + + AGIQGARHAQFG
Sbjct: 405 AYPEFPFEGQLLNPSFPLNLVAHGHHHYHHTQSYHPSFFPFPDGSAPPAGIQGARHAQFG 464
Query: 466 ISSSDFHVNNKLQSGLFLSSLQR---FTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQN 522
S D H+ + LQS L L+R TP ++ ++ + N +
Sbjct: 465 PSLPDLHLTH-LQSSLLNPGLRRHDHLTP------ALVQPRISTDLTIGSSPARKNGVSS 517
Query: 523 LEKSENIKKHQ----FLLFGQPIRTEQQISHSCSDDVVSQVL-GKSSSDGHSDKVKASSD 577
+ KK + +LFGQ I TEQQ+S S S S G SS + ++K S+
Sbjct: 518 TLPDDGAKKPKPSSGLVLFGQTILTEQQMSRSDSAGATSPAASGNSSLNCDTEKAGNVSE 577
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
GSGS Q S E+ ++ V+E GL+ G CKVF+ESE VGR LDLS +SS+E
Sbjct: 578 GSGSGVIQNASPERLR----WFGDGNSVSELGLEPGQCKVFIESETVGRNLDLSAMSSFE 633
Query: 638 ELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
ELY RL+ +F IE +++ S VLY+ A+G +K GDE FS+F+KSA+RLTIL +GSD++G
Sbjct: 634 ELYGRLSELFCIESAELRSRVLYRGATGQVKHAGDESFSNFIKSARRLTILADAGSDNIG 693
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/670 (54%), Positives = 456/670 (68%), Gaps = 68/670 (10%)
Query: 35 QGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDN 94
GHAE++ V+F + IPP++ CRV ++K++AD E+DEV+AK++L+P+ ++ D+ D
Sbjct: 83 HGHAENAYDHVDFKNLP-IPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDDHDYGDG 141
Query: 95 NLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVV 154
G ++ SEK SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY A+PPVQT++
Sbjct: 142 Q---EGNGFETNSEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYNAEPPVQTIL 198
Query: 155 AKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
AKDVHG++WKFRHIYRGTPRRHLLTTGWS FVNQKKLVAGDSIVF+RA+ GDLCVGIRRA
Sbjct: 199 AKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAESGDLCVGIRRA 258
Query: 215 KK-GIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSS 273
K+ GIG G EY S GWN GSC G+S LRE+E+ R N +L
Sbjct: 259 KRGGIGNGPEY-SPGWNPIGGSC-------GYSSLLREDESNSLRRSNCSLAD------- 303
Query: 274 GNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGM 333
G+V E V+EA LA +G+ FEVVYYPRAST EFCVKA +AAMR+ W GM
Sbjct: 304 -----RKGKVAAESVIEAATLAINGRGFEVVYYPRASTSEFCVKALDARAAMRIPWCSGM 358
Query: 334 RFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWL 393
RFKMAFETEDSSRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWL
Sbjct: 359 RFKMAFETEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWL 418
Query: 394 VELVSNMPVIHLSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNT 452
VELVSN+ I L+ FSP RKK+RLPQ D+ +P F NPL S+PL + DN
Sbjct: 419 VELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSNPLSSVLDNV 478
Query: 453 SAGIQGAR---HAQFGISSSDFH--VNNKLQSGLFLSSLQRFTP-NSRDFDGILTSHTNS 506
G+QGAR H +G+SSSD H N+ S+L P R+ D +
Sbjct: 479 PVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPQPSALPLSQPLGLRNID-------SR 531
Query: 507 SENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSD 566
+E C LTMG + N + +E+ K H +LFG+ I E+QIS S D + G
Sbjct: 532 NEKGFCFLTMGTTPCN-DDTESKKSH-IVLFGKLILPEEQISEKGSTDTANTSGGS---- 585
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGR 626
K+ +S +GS +++ + +GL+TGHCKVF+ES+DVGR
Sbjct: 586 ----KLSSSEEGSPCSNKAHDA-------------------AGLETGHCKVFMESDDVGR 622
Query: 627 TLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLT 686
TLDLSVL SYEEL R+L+ MFGI++++MLS VLY+DASGAIK G+EPFS+F+K+A+RLT
Sbjct: 623 TLDLSVLGSYEELSRKLSDMFGIQKAEMLSSVLYRDASGAIKYAGNEPFSEFLKTARRLT 682
Query: 687 ILMGSGSDSV 696
I+ GS+SV
Sbjct: 683 IVTEQGSESV 692
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/735 (53%), Positives = 482/735 (65%), Gaps = 83/735 (11%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP--SSSRIPPLIFCRV 61
E+ +D QLW ACAG M +PP+ ++V+YFPQGHAEH+LG S++R+P L+ CRV
Sbjct: 15 AERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGTADLSAARVPALVPCRV 74
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEID---FEDNNLSLNSVGSDSESEKPASFAKTLT 118
++++++AD +TDEV+A+I+LVP+ E D ED+ + E EKPASFAKTLT
Sbjct: 75 AAVRYMADPDTDEVFARIRLVPLRGGEADAGGLEDD--------AADEQEKPASFAKTLT 126
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
QSDANNGGGFSVPRYCAETIFPRLDY ADPPVQTVVAKDVHG WKFRHIYRGTPRRHLL
Sbjct: 127 QSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLL 186
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGI-----GGGNEYPSSGWNSNN 233
TTGWSTFVNQKKLVAGDSIVFLR GDL VGIRRAK+G GGG E PS GW+
Sbjct: 187 TTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHYA 246
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
G +R GN+ S ++ RG +V+PE V EA
Sbjct: 247 G-------------LMR---------GNV------SPCAAAKARG---KVRPEDVAEAAR 275
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
LAA+G+ FE VYYPRASTPEFCV+A+AV+AAMRV W GMRFKMAFETEDSSRISWFMGT
Sbjct: 276 LAAAGQSFEAVYYPRASTPEFCVRAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGT 335
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
++ VQV DPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP IHL+ FSP RK
Sbjct: 336 VAGVQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRK 395
Query: 414 KLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSD--------------NTSAGIQGA 459
K R+P +FPF+GQ P F NPL + A IQGA
Sbjct: 396 KPRIPAYPEFPFEGQLLNPAFPPNPLPHGQHPHPHHHFLHAHPPFFPFPDGSAPAAIQGA 455
Query: 460 RHAQFGISSSDFHVNNKLQSGLFLSSLQR--------FTPNSRDFDGILTSHTNSSENLS 511
RHAQF S SD H+ + LQS L L+R P D + +++
Sbjct: 456 RHAQFVPSLSDLHLTH-LQSSLLYPGLRRPDHVGPTIPIPARISTDLTIGGAPARDDDVP 514
Query: 512 CLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDG---H 568
C L++G +N+ +K + +K +LFG+ I TEQQ+S S S S +S +
Sbjct: 515 CALSIGATNK--QKPDAVKPAGLVLFGRTILTEQQMSLSSSGGATSPAATTGNSSQLYWN 572
Query: 569 SDKVKASSDGSGSTHEQRISIEKSSSSEFF-W-----NRSFQVTESGLDTGHCKVFLESE 622
++K S+GSGS Q + +SSE W QV+E GL+ G CKVF+ES+
Sbjct: 573 AEKGPNVSEGSGSGVIQNSPTKNHASSERLPWCVGDGGSQQQVSELGLEPGQCKVFVESD 632
Query: 623 DVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSA 682
VGR LDLS LSS++ELYRRL+ MFGIE +++ S VLY+ A+G +K GDEPFSDF++SA
Sbjct: 633 TVGRNLDLSALSSFDELYRRLSEMFGIEGAELRSRVLYRCATGEVKHAGDEPFSDFVRSA 692
Query: 683 KRLTILMGSGSDSVG 697
+RLTIL +GSD++G
Sbjct: 693 RRLTILTDAGSDNLG 707
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 666 bits (1719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/624 (56%), Positives = 431/624 (69%), Gaps = 38/624 (6%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF---PSSSRIPPLI 57
M E+ +D QLWHACAG+MVQ+PPLN+ VFYFPQGHAEH+ G V + +R+PPLI
Sbjct: 1 MDSAERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVEYFGKNHQTRVPPLI 60
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEI-DFEDNNL--SLNSVGSDSESEKPASFA 114
CR+S++K++AD +TDEVY K++L P+ +E+ D +D+ + NS G +++ + P SFA
Sbjct: 61 PCRLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNTNSGGVENQEKPPTSFA 120
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLTQSDANNGGGFSVPRYCAETIFPRLDY+A+PPVQT++AKD+HG+ WKFRHIYRGTPR
Sbjct: 121 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPR 180
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLLTTGWS FVNQK+LVAGDSIVFLRA++GDLCVGIRRAKKGIGGG E+ SSGWN
Sbjct: 181 RHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEF-SSGWN---- 235
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
NP + +S+ S SG GRV PE V+EAV
Sbjct: 236 -----NP----------LFGGGGGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTC 280
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
A +G+PFEVVYYPRAS+PEFCVKAS VKAAM++ W GMRFKM FETEDSSRISWFMGTI
Sbjct: 281 AVNGRPFEVVYYPRASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTI 340
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
SSVQVADPI WP+SPWRLLQV WDEPDLLQNVK V+PWLVELVSNMP +LS +SP RKK
Sbjct: 341 SSVQVADPIRWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNLSAYSPPRKK 400
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSD-NTSAGIQGARHAQFGISSSDFHV 473
R Q F Q MP FS N L ++ LC + D N+S GIQGARHAQFG+S SDF
Sbjct: 401 QRFLQDPYFQVINQLPMPSFSSNLLNYTNSLCTIQDSNSSGGIQGARHAQFGLSPSDFPF 460
Query: 474 NNKLQSGLFLSSLQRFTPNS----RDFDGILTSHTNSSEN--LSCLLTMGNSNQNLEKSE 527
NKL + + L R + R G ++T + N +SCLLT+GN QN ++S
Sbjct: 461 -NKLPADMLLGGFSRLDHAAAQPIRPPCGTYKNNTTTKANVGISCLLTVGNPGQNFKESN 519
Query: 528 NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRI 587
K LLFG+ I+TEQ+ S++ S + G S S+G+S K +SDG GS Q
Sbjct: 520 ETKAPHILLFGKLIQTEQKSSNTSS----ANTNGNSVSEGNSHKTSNASDGVGSGLHQGS 575
Query: 588 SIEKSSSSEFFWNRSFQVTESGLD 611
IE +S W + ++ G D
Sbjct: 576 PIENNSDGGSPWYKDQHKSDLGTD 599
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 662 bits (1707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/461 (72%), Positives = 375/461 (81%), Gaps = 21/461 (4%)
Query: 1 MKEVEKS-IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFC 59
M+ EK+ +D QLWHACAG MVQ+PP+NS VFYFPQGHAEH+LG+V+F +IPPLI C
Sbjct: 1 MESCEKNCLDSQLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSMLPKIPPLILC 60
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++K+LAD ETDEVYAKI+LVP+ NE +FED L S S++ +EKP SFAKTLTQ
Sbjct: 61 RVGAVKYLADVETDEVYAKIRLVPVGNNEPEFED--AVLGSSASET-AEKPTSFAKTLTQ 117
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE WKFRHIYRGTPRRHLLT
Sbjct: 118 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRHLLT 177
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFVNQKKLVAGDSIVFLRA +GDLCVGIRRAK+ G + PS GWN TG
Sbjct: 178 TGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPS-GWN-------TG 229
Query: 240 NP--FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
P +GGFS +LRE+EN++ R G +N G+ NSSG G+VKP+ V+EA LAA+
Sbjct: 230 APGSYGGFSAYLREDENRIKRTG---IN--GNPNSSGGGFKERGKVKPKSVIEAAYLAAT 284
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
G+PFEVVYYPRA+TPEFCV+AS+V AAM + W G+RFKM FETEDSSRISWFMGTISSV
Sbjct: 285 GQPFEVVYYPRANTPEFCVRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSV 344
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
QVADPI WPNSPWRLLQVTWDEPDLLQNVK VSPWLVELVSNMP+IHLSPFSP RKKL L
Sbjct: 345 QVADPIHWPNSPWRLLQVTWDEPDLLQNVKHVSPWLVELVSNMPMIHLSPFSPPRKKLCL 404
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQG 458
PQ D DGQF +P FS NPLG SS CCL DN AGIQG
Sbjct: 405 PQ--DLLIDGQFRIPSFSSNPLGASSHFCCLPDNIPAGIQG 443
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/740 (50%), Positives = 477/740 (64%), Gaps = 90/740 (12%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP--SSSRIPPLIFCRV 61
E+ +D QLW ACAG M +PP+ ++V+YFPQGHAEH+LG S++R+P L+ CRV
Sbjct: 15 AERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAARVPALVPCRV 74
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++++++AD +TDEV+A+I+LVP+ + D + + ++ +D E EKPASFAKTLTQSD
Sbjct: 75 TAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAAD-EQEKPASFAKTLTQSD 133
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY ADPPVQTVVAKDVHG WKFRHIYRGTPRRHLLTTG
Sbjct: 134 ANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTG 193
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGG-----NEYPSSGWNSNNGSC 236
WSTFVNQKKLVAGDSIVFLR GDL VGIRRAK+G G ++ P++GW+ G
Sbjct: 194 WSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHYAG-- 251
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+R GN+ S ++ RG +V+PE V EA LAA
Sbjct: 252 -----------LMR---------GNV------SPCAAAKARG---KVRPEDVAEAARLAA 282
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G+ FEVVYYPRASTPEFCV+A+AV+ AMRV W GMRFKMAFETEDSSRISWFMGT++
Sbjct: 283 AGQSFEVVYYPRASTPEFCVRAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAG 342
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
VQV DPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP IHL+ FSP RKK R
Sbjct: 343 VQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPR 402
Query: 417 LPQQLDFPFDGQFTMPLFSGNPL-----------------GPSSPLCCLSDNTSAGIQGA 459
+P +FPF+GQ P F NPL + + A IQGA
Sbjct: 403 IPAYPEFPFEGQLLNPAFPPNPLPHGQHHHHFLHSHSHQHHHPPFFPFPAGSAPAAIQGA 462
Query: 460 RHAQFGISSSDFHVNNKLQSGLFLSSLQR------FTPNSRDFDGILT-------SHTNS 506
RHAQF S+ H+ + LQ L L+R TP LT + +
Sbjct: 463 RHAQFVPPFSELHLTH-LQPSLLYPRLRRPDHVGPTTPIPARVSTDLTIGGAAAAARDDD 521
Query: 507 SENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSD 566
++ C +N+ + + K +LFG+ I TEQQ+S S + + G SS+
Sbjct: 522 DDDFPCAPPSTGANR---QKPDAKPAGLVLFGRTILTEQQMSRSGATSPAAT--GNSSTC 576
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSE---FFWNRSFQVTES------GLDTGHCKV 617
+++K +S+GSG + + S K++SSE + Q ++ GL+ G CKV
Sbjct: 577 WNAEKGPNASEGSGGSGVIQTSPAKAASSERPPWLGGDGSQQQQASGELGLGLEPGQCKV 636
Query: 618 FLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSD 677
F+ES+ VGR LDL+ L S++ELY RL+ MFG+ +++ S VLY+ A+ GDEPFSD
Sbjct: 637 FVESDTVGRNLDLAALRSFDELYGRLSGMFGVAGAELRSRVLYRGAA------GDEPFSD 690
Query: 678 FMKSAKRLTILMGSGSDSVG 697
F++SA+RLT+L +GSD++G
Sbjct: 691 FVRSARRLTVLTDAGSDNLG 710
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/730 (52%), Positives = 473/730 (64%), Gaps = 74/730 (10%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLG--SVNFPSSSRIPPLIFCRV 61
E+ +D QLW ACAGSM +P + ++V YFPQGHAEH+LG S++R+P L+ CRV
Sbjct: 15 AERCVDRQLWLACAGSMCTVPLVGASVCYFPQGHAEHALGLDGAADLSAARVPALVPCRV 74
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++++++AD +TDEV+A+I+LVP+ E + + V + E EKPASFAKTLTQSD
Sbjct: 75 TAVRYMADPDTDEVFARIRLVPLRGGEAHAGGLD---DDVAAADEQEKPASFAKTLTQSD 131
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY ADPPVQ VVAKDVHG WKFRHIYRGTPRRHLLTTG
Sbjct: 132 ANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRGTPRRHLLTTG 191
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGG-----NEYPSSGWNSNNGSC 236
WSTFVNQKKL+AGDSIVFLR GDL VGIRRAK+G G +E P+ GW+ G
Sbjct: 192 WSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPTPGWHHYAG-- 249
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+R GN+ S ++ RG +V+PE V EA LAA
Sbjct: 250 -----------LIR---------GNV------SPCAAAKARG---KVRPEDVAEAARLAA 280
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G+ FEVVYYPRASTPEFCV+A+AV+AAMRV W GMRFKMAFETEDSSRISWFMGT++
Sbjct: 281 AGQSFEVVYYPRASTPEFCVRAAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAG 340
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
VQV DPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP IHL+ FSP RKK R
Sbjct: 341 VQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPR 400
Query: 417 LPQQLDFPFDGQFTMPLFSGNPL-------------GPSSPLCCLSDNTSAGIQGARHAQ 463
+P +FPF+GQ P F +PL P S + A IQGARHAQ
Sbjct: 401 IPAYPEFPFEGQLLNPAFPPSPLPHGQQHHHNFLHAHPPSFFPFPDGSAPAAIQGARHAQ 460
Query: 464 FGISSSDFHVNNKLQSGLFLSSLQR---FTPNSRDFDGILTSHT----NSSENLSCLLTM 516
F S SD H+ + LQS L L+R P GI T T + + + C L++
Sbjct: 461 FVPSLSDLHLIH-LQSSLLYPGLRRPDHVGPTIPIPSGISTDLTIGGAPARDGVPCALSV 519
Query: 517 GNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSS------DGHSD 570
G S QN + +K +LFG+ I TE Q+S S S S +SS G +
Sbjct: 520 GASKQN---PDAVKPAGLVLFGRTILTEHQMSLSSSGGATSPAATGNSSLCWTAEKGPNV 576
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFW---NRSFQVTESGLDTGHCKVFLESEDVGRT 627
+ S + + + +SS W S Q +E GL+ G CKVF+ES+ VGR
Sbjct: 577 SEGSGSGSGSGVIQNSPTGKNTSSERLPWFGDGSSQQASEPGLEPGQCKVFVESDTVGRN 636
Query: 628 LDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
LDLS L S++ELY RL+ MFG+E ++M S VLY+ A+G ++ GDEPFSDF+KSA+R+TI
Sbjct: 637 LDLSALGSFDELYGRLSEMFGVEGAEMRSRVLYRGATGEVRHAGDEPFSDFVKSARRITI 696
Query: 688 LMGSGSDSVG 697
L +GSD++G
Sbjct: 697 LTDAGSDNLG 706
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/604 (57%), Positives = 419/604 (69%), Gaps = 50/604 (8%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-VNFP-SSSRIPPLIF 58
M E+ +D QLWHACAG+MVQ+PPLN+ VFYFPQGHAEH+ G V+FP + +R+PPLI
Sbjct: 1 MDSAERCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKRVDFPKNQTRVPPLIP 60
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEI-DFEDNNLSLNSVGS---DSESEKP-ASF 113
CR+S++K++AD +TDEVY K++L P+ +E+ D +D+ NS G D EKP SF
Sbjct: 61 CRLSAMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCFLGNSAGGGGVDQGQEKPPTSF 120
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
AKTLTQSDANNGGGFSVPRYCAETIFPRLDY+A+PPVQT++AKD+ G+ WKFRHIYRGTP
Sbjct: 121 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTP 180
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
RRHLLTTGWS FVNQK+LVAGDSIVFLRA++GDLCVGIRRAKKGIGGG E+ S GWN
Sbjct: 181 RRHLLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWN--- 237
Query: 234 GSCVTGNPF--GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
NP GGF C E N M S G+ GRV E V+EA
Sbjct: 238 ------NPLFGGGFLC--GSESNLM---------------SGGDHEMLVGRVAAESVVEA 274
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
V A +G+PFEVVYYPRAS+PEFCVKAS VKAAM++ W GMRFKM FETEDSSRISWFM
Sbjct: 275 VTCAVNGRPFEVVYYPRASSPEFCVKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFM 334
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTISSVQVADPI WP+SPWRLLQV WDEPDLLQNVK V+PWLVELVSNMP +LS +SP
Sbjct: 335 GTISSVQVADPILWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPTFNLSAYSPP 394
Query: 412 RKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSD-NTSAGIQGARHAQFGISSSD 470
RKK R Q F Q MP FS N L ++ +C + D N+S GIQGARH QFG+S SD
Sbjct: 395 RKKQRFLQDPYFQVINQLPMPSFSSNLLNYTNSICTIEDNNSSGGIQGARHPQFGLSPSD 454
Query: 471 FHVNNKLQSGLFLSSLQRF--------TPNSRDFDGILTSHTNSSENLSCLLTMGNSNQN 522
F NKL + + L R P+ F T+ N ++SCLLT+GN QN
Sbjct: 455 FPF-NKLPADMLLGGFSRLDHAAAQPIMPHCGTFKNNTTTKANV--DISCLLTVGNPGQN 511
Query: 523 LEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGST 582
++S K LLFG+ I TEQ+ S++ + G S S+G+S K +SDG
Sbjct: 512 FKESNETKAPHILLFGKLIHTEQKSSNT---TSSASTNGNSVSEGNSLKTSNASDGGSPW 568
Query: 583 HEQR 586
++++
Sbjct: 569 YKEQ 572
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/482 (66%), Positives = 365/482 (75%), Gaps = 59/482 (12%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
KE K ++PQLWHACAG MVQ+PP+NS VFYFPQGHAEH+ SV+F + RIP I CRV
Sbjct: 12 KEAGKCLNPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHACASVDFRNYPRIPAYIPCRV 71
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES-EKPASFAKTLTQS 120
S++KF+AD E+DEVYAKI LVP+ +E D++D+ G+ +ES EKPASFAKTLTQS
Sbjct: 72 SAMKFMADPESDEVYAKITLVPLNGSESDYDDDGY-----GNGTESQEKPASFAKTLTQS 126
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFPRLDYTADPPVQ ++AKDVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 127 DANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTT 186
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFVN KKL+AGDSIVFLRA++GDLCVGIRRAK+GIG C G+
Sbjct: 187 GWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIG----------------CSNGS 230
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
FG +V E V+EAV LA +G+P
Sbjct: 231 FFGRV------------------------------------KVTAEAVIEAVRLAVNGQP 254
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEV+YYPRASTPEFCVK+S VK+A ++ W GMRFKMAFETEDSSRISWFMGTISSVQVA
Sbjct: 255 FEVIYYPRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVA 314
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DP+ WP+SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP IHL+ FSP RKKLR PQ
Sbjct: 315 DPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPSIHLTHFSPPRKKLRFPQY 374
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
DFP D QF+MP FS N +GPS+P CLSDN AG+QGARHAQ+G+S SD H +NK QSG
Sbjct: 375 PDFPLDAQFSMPTFSSNLVGPSNPFGCLSDNIPAGMQGARHAQYGLSLSDPH-HNKFQSG 433
Query: 481 LF 482
LF
Sbjct: 434 LF 435
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/127 (57%), Positives = 95/127 (74%), Gaps = 2/127 (1%)
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFF--WNRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
KAS+D + ++ + SS E + + + + TE L+TGHCKVF+ESEDVGRTLDL
Sbjct: 450 KASNDYKSDDRKTGFTLFEHSSCEGYQTYKVNHRETEPNLETGHCKVFMESEDVGRTLDL 509
Query: 631 SVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMG 690
S+L+SY+EL +LA MF IE S+M +HVLY+DA+GA+K GDEPFSDF K+AKRLTILM
Sbjct: 510 SLLTSYDELCGKLAKMFTIEDSEMRNHVLYRDATGAVKHIGDEPFSDFTKTAKRLTILMD 569
Query: 691 SGSDSVG 697
S SD+VG
Sbjct: 570 SSSDNVG 576
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/713 (51%), Positives = 454/713 (63%), Gaps = 73/713 (10%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV--NFPSSSRIPPLIFCRVSSLK 65
+DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G + P+ R+P L+ CRV +++
Sbjct: 21 VDPQLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAG-RVPALVLCRVDAVR 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLAD +TDEV A+++L P+ NE D D + + +KPASFAKTLTQSDANNG
Sbjct: 80 FLADPDTDEVLARVRLAPVRPNEPDHAD------AAAPGAREDKPASFAKTLTQSDANNG 133
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPRYCAETIFPRLDY+ADPPVQTV+AKDVHG +WKFRHIYRGTPRRHLLTTGWS F
Sbjct: 134 GGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSAF 193
Query: 186 VNQKKLVAGDSIVFLR-AQDGDLCVGIRRAKK-GIGGGNEYPSSGWNSNNGSCVTGNPFG 243
VNQK+LVAGDSIVF+R GDLCVGIRRAKK GIGGG E+P + G +
Sbjct: 194 VNQKRLVAGDSIVFMRTGGTGDLCVGIRRAKKGGIGGGPEFPH---HQPPDGGGYGYGYA 250
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
GFS FLR EE+ + G RG V+ +
Sbjct: 251 GFSTFLRGEEDD--EGQGQGAGAAGGGRRGRQPRGERAAVRGGL---------------- 292
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y P+A+T + C A W GMRFKMAFETEDSSRISWFMGT+++VQVADPI
Sbjct: 293 -YLPKANT-QSCASRRGRSAHHVTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPI 350
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFS-PARKKLRLPQQL 421
WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVS+ P I HL+PFS P+RKKL +P
Sbjct: 351 RWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPL-- 408
Query: 422 DFPFDGQFTMPLFSGNPLGPS--SPLCCLSDNTS--AGIQGARHAQFGISSSDFHVNNKL 477
+P Q P+F G+PL P+ D + AGIQGARHAQFGIS D H +L
Sbjct: 409 -YPEGHQLPAPMFHGSPLVGRGVGPMRYFPDGGTPPAGIQGARHAQFGISLPDLHHLTRL 467
Query: 478 QSGLF-----LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ----NLEKSEN 528
QS L L R G++ H + +++SCLLT+G + +++ +
Sbjct: 468 QSSLSPHAHGLRHQLDHGARPRIAGGLIVGHPAARDDISCLLTIGTAPHKKPSDVKSAAA 527
Query: 529 IKKHQFLLFGQPIRTEQQIS----------HSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
Q +LFG+PI TEQQIS S SDD + + +SD +
Sbjct: 528 APAPQLMLFGKPILTEQQISLGFRPLPAPKKSPSDDAAET---ERTVSNNSDASSPAGTA 584
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDT---GHCKVFLESEDVGRTLDLSVLSS 635
SGST SI + S N++ + D GHCKVF++SEDVGRTLDLS ++S
Sbjct: 585 SGST----PSISGGAPSSCQDNKAAATATATDDDDLLGHCKVFMQSEDVGRTLDLSAVAS 640
Query: 636 YEELYRRLAIMFGIERSDMLSHVLYQD-ASGAIKRTGDEPFSDFMKSAKRLTI 687
YEELY+RLA MFG++R+++ SHV Y+D ASGA+K GDEPFS+F K+A+RLTI
Sbjct: 641 YEELYQRLADMFGVDRAELTSHVFYRDGASGALKHAGDEPFSEFTKTARRLTI 693
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 335/557 (60%), Positives = 399/557 (71%), Gaps = 29/557 (5%)
Query: 150 VQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCV 209
V TV+AKDVHG +WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF+R ++GDLCV
Sbjct: 95 VPTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTENGDLCV 154
Query: 210 GIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEE--NKMARNGNMNLNSY 267
GIRRAKKG GG E+ GN +GGFS FLR ++ NKMA
Sbjct: 155 GIRRAKKGGVGGPEFLPPPPPPPPTPAAGGN-YGGFSMFLRGDDDGNKMAAA-------- 205
Query: 268 GSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRV 327
+ G R RV+PE V+EA LA SG+PFEVVYYPRASTPEFCVKA AV+AAMR
Sbjct: 206 ----ARGKVRA---RVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVKAGAVRAAMRT 258
Query: 328 HWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVK 387
W GMRFKMAFETEDSSRISWFMGT+S+VQVADPI WPNSPWRLLQV+WDEPDLLQNVK
Sbjct: 259 QWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVK 318
Query: 388 RVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS-SPLC 446
RVSPWLVELVSNMP IHL+PFSP RKKL +P + P DGQF P+F GNPL P+C
Sbjct: 319 RVSPWLVELVSNMPAIHLAPFSPPRKKLCVPLYPELPIDGQFPTPMFHGNPLARGVGPMC 378
Query: 447 CLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTP--NSRDFDGILTSHT 504
D T AGIQGARHAQFGIS SD H+ NKLQS L L + R G++ H
Sbjct: 379 YFPDGTPAGIQGARHAQFGISLSDLHL-NKLQSSLSPHGLHQLDHGMQPRIAAGLIIGHP 437
Query: 505 NSSENLSCLLTMGNSNQNLEKSENIKK-HQFLLFGQPIRTEQQISHSCSDDVVSQVLGKS 563
+ +++SCLLT+G S QN +KS+ K Q +LFG+PI TEQQIS D S + KS
Sbjct: 438 AARDDISCLLTIG-SPQNNKKSDGKKAPAQLMLFGKPILTEQQISLG---DAASVDVKKS 493
Query: 564 SSDGHSDKV--KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLES 621
SSDG+++ K++SD S Q + + S + +V + GL+TGHCKVF++S
Sbjct: 494 SSDGNAENTVNKSNSDVSSPRSNQNGTTDNLSCGGVPLCQDNKVLDVGLETGHCKVFMQS 553
Query: 622 EDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKS 681
EDVGRTLDLSV+ SYEELYRRLA MFGIE+++++SHV Y+DA+GA+K TGDEPFS+F K+
Sbjct: 554 EDVGRTLDLSVVGSYEELYRRLADMFGIEKAELMSHVFYRDAAGALKHTGDEPFSEFTKT 613
Query: 682 AKRLTILMGSGSDSVGR 698
A+RL IL + D++ R
Sbjct: 614 ARRLNILTDTSGDNLAR 630
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 51/84 (60%), Positives = 68/84 (80%), Gaps = 3/84 (3%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS--VNFPSSSRIPPLIFC 59
+E +K +DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G V FP R+P L+ C
Sbjct: 14 RESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFP-GGRVPALVLC 72
Query: 60 RVSSLKFLADSETDEVYAKIKLVP 83
RV+ ++F+AD +TDEV+AKI+LVP
Sbjct: 73 RVAGVRFMADPDTDEVFAKIRLVP 96
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 354/721 (49%), Positives = 460/721 (63%), Gaps = 70/721 (9%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKF 66
S+D QLW ACAGSM +PP+ + V+YFPQGHAE + +V+ SS+R+PPL+ CRV +++F
Sbjct: 18 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-SSARVPPLVPCRVVAVRF 76
Query: 67 LADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+AD+E+DEV+AKI+LVP+ + +D + + ++ +P SFAKTLTQSDANN
Sbjct: 77 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 136
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CAETIFP LDY+++PPVQ+V AKDVHG W FRHIYRGTPRRHLLTTGWS
Sbjct: 137 GGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 196
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG---IGGGNEYPSS--GWNSNNGSCVTG 239
FVN+K+L AGDSIVF+R + G++ VG+RRAK+G IGG +E SS GW+ G
Sbjct: 197 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRG----- 251
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
M RN ++G G+V PE VL A A +G+
Sbjct: 252 ---------------LMRRNATAT--------ATGGRTPPKGKVPPENVLTAATRATTGQ 288
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEV+YYPRASTPEFCV+A+AV+ AM V W GMRFKMAFETEDSSRISWFMGT++ VQ
Sbjct: 289 PFEVLYYPRASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQA 348
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+DP+ WP SPWRLLQVTWDEP+LLQNVKRV PWLVELVS+MP +HL FSP RKK R P
Sbjct: 349 SDPVRWPQSPWRLLQVTWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPRKKPRNPP 408
Query: 420 QLDFPFDGQ-FTMPLFSGNPLGPSS------PLCCLSDNTS--AGIQGARHAQFGISSSD 470
+ P +GQ FT P+F NP+ P D+++ AGIQGARHAQF +
Sbjct: 409 YAELPLEGQIFTGPVFPPNPMAHDHHHHHGFPFLPFPDSSAQPAGIQGARHAQFASPFPE 468
Query: 471 FHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ--------- 521
FH+ N LQ L L + R P R S + LT+G+ +
Sbjct: 469 FHIGN-LQPNLMLYAGIRLPPADRAAPAPRPPRIIISTD----LTIGSPGKPDDAACSPS 523
Query: 522 -NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
+K ++ K FLLFGQ I TE+QI + SD +S + ++K +S+GS
Sbjct: 524 SGGKKIDDTKPRGFLLFGQAILTEEQIKNGNSDGR------PASPNWDAEKAPNTSEGSD 577
Query: 581 STHEQRISIEKSSSS----EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
S Q + ++ S F N + +E L+ G CKVF+ESE VGR+LDLS LSS+
Sbjct: 578 SGVTQGSPTKNTTPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSF 637
Query: 637 EELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
EELY L+ MF I ++ SH++Y+ +G +K GDEPF F+KSA++L IL +GSD++
Sbjct: 638 EELYACLSDMFSIGSDELRSHLVYRSPAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNL 697
Query: 697 G 697
G
Sbjct: 698 G 698
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 628 bits (1620), Expect = e-177, Method: Compositional matrix adjust.
Identities = 354/721 (49%), Positives = 460/721 (63%), Gaps = 70/721 (9%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKF 66
S+D QLW ACAGSM +PP+ + V+YFPQGHAE + +V+ SS+R+PPL+ CRV +++F
Sbjct: 14 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-SSARVPPLVPCRVVAVRF 72
Query: 67 LADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+AD+E+DEV+AKI+LVP+ + +D + + ++ +P SFAKTLTQSDANN
Sbjct: 73 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 132
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CAETIFP LDY+++PPVQ+V AKDVHG W FRHIYRGTPRRHLLTTGWS
Sbjct: 133 GGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 192
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG---IGGGNEYPSS--GWNSNNGSCVTG 239
FVN+K+L AGDSIVF+R + G++ VG+RRAK+G IGG +E SS GW+ G
Sbjct: 193 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRG----- 247
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
M RN ++G G+V PE VL A A +G+
Sbjct: 248 ---------------LMRRNATAT--------ATGGRTPPKGKVPPENVLTAATRATTGQ 284
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEV+YYPRASTPEFCV+A+AV+ AM V W GMRFKMAFETEDSSRISWFMGT++ VQ
Sbjct: 285 PFEVLYYPRASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQA 344
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+DP+ WP SPWRLLQVTWDEP+LLQNVKRV PWLVELVS+MP +HL FSP RKK R P
Sbjct: 345 SDPVRWPQSPWRLLQVTWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPRKKPRNPP 404
Query: 420 QLDFPFDGQ-FTMPLFSGNPLGPSS------PLCCLSDNTS--AGIQGARHAQFGISSSD 470
+ P +GQ FT P+F NP+ P D+++ AGIQGARHAQF +
Sbjct: 405 YAELPLEGQIFTGPVFPPNPMAHDHHHHHGFPFLPFPDSSAQPAGIQGARHAQFASPFPE 464
Query: 471 FHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ--------- 521
FH+ N LQ L L + R P R S + LT+G+ +
Sbjct: 465 FHIGN-LQPNLMLYAGIRLPPADRAAPAPRPPRIIISTD----LTIGSPGKPDDAACSPS 519
Query: 522 -NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
+K ++ K FLLFGQ I TE+QI + SD +S + ++K +S+GS
Sbjct: 520 SGGKKIDDTKPRGFLLFGQAILTEEQIKNGNSDGR------PASPNWDAEKAPNTSEGSD 573
Query: 581 STHEQRISIEKSSSS----EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
S Q + ++ S F N + +E L+ G CKVF+ESE VGR+LDLS LSS+
Sbjct: 574 SGVTQGSPTKNTTPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSF 633
Query: 637 EELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
EELY L+ MF I ++ SH++Y+ +G +K GDEPF F+KSA++L IL +GSD++
Sbjct: 634 EELYACLSDMFSIGSDELRSHLVYRSPAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNL 693
Query: 697 G 697
G
Sbjct: 694 G 694
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 627 bits (1616), Expect = e-177, Method: Compositional matrix adjust.
Identities = 359/718 (50%), Positives = 457/718 (63%), Gaps = 90/718 (12%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP--SSSRIPPLIFCRV 61
E+ +D QLW ACAG M +PP+ ++V+YFPQGHAEH+LG S++R+P L+ CRV
Sbjct: 15 AERCVDRQLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAARVPALVPCRV 74
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++++++AD +TDEV+A+I+LVP+ + D + + ++ +D E EKPASFAKTLTQSD
Sbjct: 75 TAVRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAAD-EQEKPASFAKTLTQSD 133
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY ADPPVQTVVAKDVHG WKFRHIYRGTPRRHLLTTG
Sbjct: 134 ANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHLLTTG 193
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGG-----NEYPSSGWNSNNGSC 236
WSTFVNQKKLVAGDSIVFLR GDL VGIRRAK+G G ++ P++GW+ G
Sbjct: 194 WSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHYAG-- 251
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+R GN+ S ++ RG +V+PE V EA LAA
Sbjct: 252 -----------LMR---------GNV------SPCAAAKARG---KVRPEDVAEAARLAA 282
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G+ FEVVYYPRASTPEFCV+A+AV+ AMRV W GMRFKMAFETEDSSRISWFMGT++
Sbjct: 283 AGQSFEVVYYPRASTPEFCVRAAAVRVAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAG 342
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
VQV DPI WP SPWRLLQVTWDEPDLLQNVKRVSPWLVELVS+MP IHL+ FSP RKK R
Sbjct: 343 VQVTDPIRWPQSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPR 402
Query: 417 LPQQLDFPFDGQFTMPLFSGNPL-----------------GPSSPLCCLSDNTSAGIQGA 459
+P +FPF+GQ P F NPL + + A IQGA
Sbjct: 403 IPAYPEFPFEGQLLNPAFPPNPLPHGQHHHHFLHSHSHQHHHPPFFPFPAGSAPAAIQGA 462
Query: 460 RHAQFGISSSDFHVNNKLQSGLFLSSLQR------FTPNSRDFDGILT-------SHTNS 506
RHAQF S+ H+ + LQ L L+R TP LT + +
Sbjct: 463 RHAQFVPPFSELHLTH-LQPSLLYPRLRRPDHVGPTTPIPARVSTDLTIGGAAAAARDDD 521
Query: 507 SENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSD 566
++ C +N+ + + K +LFG+ I TEQQ+S S + + G SS+
Sbjct: 522 DDDFPCAPPSTGANR---QKPDAKPAGLVLFGRTILTEQQMSRSGATSPAAT--GNSSTC 576
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSE---FFWNRSFQVTES------GLDTGHCKV 617
+++K +S+GSG + + S K++SSE + Q ++ GL+ G CKV
Sbjct: 577 WNAEKGPNASEGSGGSGVIQTSPAKAASSERPPWLGGDGSQQQQASGELGLGLEPGQCKV 636
Query: 618 FLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPF 675
F+ES+ VGR LDL+ L S++ELY RL+ MFG+ +++ S VLY+ A+ GDEPF
Sbjct: 637 FVESDTVGRNLDLAALRSFDELYGRLSGMFGVAGAELRSRVLYRGAA------GDEPF 688
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 349/721 (48%), Positives = 455/721 (63%), Gaps = 70/721 (9%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKF 66
S+D QLW ACAGSM +PP+ + V+YFPQGHAE + +V+ SS+R+PPL+ CRV +++F
Sbjct: 18 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-SSARVPPLVPCRVVAVRF 76
Query: 67 LADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+AD+E+DEV+AKI+LVP+ + +D + + ++ +P SFAKTLTQSDANN
Sbjct: 77 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 136
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
G G R+CAETIFP LDY+++PPVQ+V AKDVHG W FRHIYRGTPRRHLLTTGWS
Sbjct: 137 GRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 196
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG---IGGGNEYPSS--GWNSNNGSCVTG 239
FVN+K+L AGDSIVF+R + G++ VG+RRAK+G IGG +E SS GW+ G
Sbjct: 197 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRG----- 251
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
M RN ++G G+V PE VL A A +G+
Sbjct: 252 ---------------LMRRNATAT--------ATGGRTPPKGKVPPENVLTAATRATTGQ 288
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEV+YYPRASTPEFCV+A+AV+ AM V W GMRFKMAFETEDSSRISWFMGT++ VQ
Sbjct: 289 PFEVLYYPRASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQA 348
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+DP+ WP SPWRLLQVTWDEP+LLQNVKRV PWLVELVS+MP +HL FSP RKK R P
Sbjct: 349 SDPVRWPQSPWRLLQVTWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPRKKPRNPP 408
Query: 420 QLDFPFDGQ-FTMPLFSGNPLGPSS------PLCCLSDNTS--AGIQGARHAQFGISSSD 470
+ P +GQ FT P+F NP+ P D+++ AGIQGARHAQF +
Sbjct: 409 YAELPLEGQIFTGPVFPPNPMAHDHHHHHGFPFLPFPDSSAQPAGIQGARHAQFASPFPE 468
Query: 471 FHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ--------- 521
FH+ N LQ L L + R P R S + LT+G+ +
Sbjct: 469 FHIGN-LQPNLMLYAGIRLPPADRAAPAPRPPRIIISTD----LTIGSPGKPDDAACSPS 523
Query: 522 -NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
+K ++ K FLLFGQ I TE+QI + SD +S + ++K +S+GS
Sbjct: 524 SGGKKIDDTKPRGFLLFGQAILTEEQIKNGNSDGR------PASPNWDAEKAPNTSEGSD 577
Query: 581 STHEQRISIEKSSSS----EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
S Q + ++ S F N + +E L+ G CKVF+ESE VGR+LDLS LSS+
Sbjct: 578 SGVTQGSPTKNTTPSWSLPYFGGNNISRASEYELNPGQCKVFVESETVGRSLDLSALSSF 637
Query: 637 EELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSV 696
EELY L+ MF I ++ SH++Y+ +G +K GDEPF F+KSA++L IL +GSD++
Sbjct: 638 EELYACLSDMFSIGSDELRSHLVYRSPAGEVKHAGDEPFCAFVKSARKLRILTDAGSDNL 697
Query: 697 G 697
G
Sbjct: 698 G 698
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 346/606 (57%), Positives = 417/606 (68%), Gaps = 52/606 (8%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
K EK +D QLWHACAG+MVQ+PPLN+ VFYFPQGHAEH+ V+F S +R+PPLI CR+
Sbjct: 10 KTSEKCLDSQLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHNKVDF-SKTRVPPLIPCRI 68
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S++K++AD ETDEVY K+KL P+ NE+DFE++ N+ G +S+ EKPASFAKTLTQSD
Sbjct: 69 SAMKYMADPETDEVYVKMKLTPLRENELDFEEDCFFGNN-GLESQ-EKPASFAKTLTQSD 126
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGGGFSVPRYCAETIFPRLDY+A+PPVQT++AKD+HG+ WKFRHIYRGTPRRHLLTTG
Sbjct: 127 ANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTTG 186
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG-IGGG-NEYPSSGWNSNNGSCVTG 239
WS FVN KKLVAGDSIVFLRA++GDLCVGIRRAKKG IGGG +++ +S N S + G
Sbjct: 187 WSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLFG 246
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
GF C N +NG +L G+V E V+EAV A +G+
Sbjct: 247 GVGSGFLC-----GNDNRKNGCDDL---------------MGKVGAESVVEAVNCAVNGR 286
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
FEVVYYPRASTPEFCVK S+VK+AM++ W GMRFKM FETEDSSRISWFMGTISSV V
Sbjct: 287 SFEVVYYPRASTPEFCVKVSSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHV 346
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DPI WP+SPWRLLQV WDEPDLLQNVK V+PWLVELVSNMP +LSPF+P RKK R Q
Sbjct: 347 QDPIRWPDSPWRLLQVVWDEPDLLQNVKCVNPWLVELVSNMPNFNLSPFTPPRKKPRFIQ 406
Query: 420 QLDFPFDGQFTMPLFSGNPL--GPSSPLCCLSDNTS-----AGIQGARHAQFGISSSD-- 470
F Q + P S L S LC + D T+ + IQGARHAQFG + ++
Sbjct: 407 DPYFHLMNQSSSPSISNINLLNYTKSSLCNIQDTTTNSSFASSIQGARHAQFGPNYNNPS 466
Query: 471 --FHVNNKLQSGLFLS--SLQRFT---PNSRDFDGILTS-----HTNSSENLSCLLTMGN 518
N LQ +FL SL RF P +R G S +T ++ +LSCLL++GN
Sbjct: 467 DLIPFNKLLQQDMFLGNLSLSRFNQQQPITRPPYGPYKSINNNNNTKTNVDLSCLLSVGN 526
Query: 519 SNQ-----NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLG-KSSSDGHSDKV 572
S Q N+E + LLFG+ I TEQ S+ D VS+ K+S+ SD V
Sbjct: 527 SGQSFKESNIEAKAPHNHNHILLFGKIIHTEQNSSNISKSDSVSEGTSLKTSNASSSDPV 586
Query: 573 KASSDG 578
+ SSDG
Sbjct: 587 ENSSDG 592
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 410/620 (66%), Gaps = 53/620 (8%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+K V KS+DPQLWHA AG MVQ+P +NS VFYFPQGHAEH+ VNF S S+IP I CR
Sbjct: 21 LKNVNKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSFIPCR 80
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V +++++A+ ETDEVYAK++LVP+ N++ F+++ ++ + +K SFAKTLTQS
Sbjct: 81 VEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVA--GINVSETKDKHQSFAKTLTQS 138
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFS PRYCAET+FPRLDY+A+PP+Q + KDVHGE W FRH+YRGTP+RHLLTT
Sbjct: 139 DANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTT 198
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV-TG 239
GWS FV+ KKL +GDSIVFLR+++GDL VGIRRAK+ G + P SGW S +G +
Sbjct: 199 GWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVD-PLSGWKSGSGIGICAA 257
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
P+GGF F EE+NK+ RNG N G S G G+VK V+EAV L + +
Sbjct: 258 PPYGGFPSFSGEEDNKLRRNGKGN----GLLISDGMM--GRGKVKALEVIEAVRLGTNMQ 311
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF+VVYYPR+ TPEF VK S + A+++ W GMRFKMA ETEDSSRISWF+GT++SVQ
Sbjct: 312 PFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQA 371
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADP SW +S WRLL+VTWDEP+LL+NVKRV+PW VE+VSNMP I LSPF P RKKLRLPQ
Sbjct: 372 ADP-SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQ 430
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DFP DGQF MP F N L P+ P+ L + + AG+QGARH FG++ DFH L
Sbjct: 431 LPDFPIDGQFPMPTFPNNLLSPNIPIFYLPETSPAGMQGARHGHFGVTLPDFH---NLPL 487
Query: 480 GLFLSSLQRFTPNSRDFDGILT-----------SHTNSSENLSCLLTMGNSNQNLEKSEN 528
GLF S Q + F+ I T N+SEN+SC ++ S Q+ EK ++
Sbjct: 488 GLFQPSFQ------QPFNNIATMPMTVPNNPALQKPNTSENVSCSHSISTSAQSSEKPDH 541
Query: 529 IKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRIS 588
K HQ +LFGQ I+ + G+ + K S+ H Q +S
Sbjct: 542 AKPHQLVLFGQTIQVDA---------------------GNENSEKKMSNHLSDLHLQGLS 580
Query: 589 IEKSSSSEFFWNRSFQVTES 608
+SS + F WN Q E+
Sbjct: 581 -SRSSDARFEWNAENQHEET 599
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 606 bits (1563), Expect = e-170, Method: Compositional matrix adjust.
Identities = 322/620 (51%), Positives = 410/620 (66%), Gaps = 53/620 (8%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
+K V KS+DPQLWHA AG MVQ+P +NS VFYFPQGHAEH+ VNF S S+IP I CR
Sbjct: 21 LKNVNKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSFIPCR 80
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V +++++A+ ETDEVYAK++LVP+ N++ F+++ ++ + +K SFAKTLTQS
Sbjct: 81 VEAIRYMANHETDEVYAKLRLVPMNINQVSFDNDGVA--GINVSETKDKHQSFAKTLTQS 138
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFS PRYCAET+FPRLDY+A+PP+Q + KDVHGE W FRH+YRGTP+RHLLTT
Sbjct: 139 DANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRGTPKRHLLTT 198
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV-TG 239
GWS FV+ KKL +GDSIVFLR+++GDL VGIRRAK+ G + P SGW S +G +
Sbjct: 199 GWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVD-PLSGWKSGSGIGICAA 257
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
P+GGF F EE+NK+ RNG N G S G G+VK V+EAV L + +
Sbjct: 258 PPYGGFPSFSGEEDNKLRRNGKGN----GLLISDGMM--GRGKVKALEVIEAVRLGTNMQ 311
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF+VVYYPR+ TPEF VK S + A+++ W GMRFKMA ETEDSSRISWF+GT++SVQ
Sbjct: 312 PFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVASVQA 371
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADP SW +S WRLL+VTWDEP+LL+NVKRV+PW VE+VSNMP I LSPF P RKKLRLPQ
Sbjct: 372 ADP-SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPRKKLRLPQ 430
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
DFP DGQF MP F N L P+ P+ L + + AG+QGARH FG++ DFH L
Sbjct: 431 LPDFPIDGQFPMPTFPNNLLSPNIPIFYLPETSPAGMQGARHGHFGVTLPDFH---NLPL 487
Query: 480 GLFLSSLQRFTPNSRDFDGILT-----------SHTNSSENLSCLLTMGNSNQNLEKSEN 528
GLF S Q + F+ I T N+SEN+SC ++ S Q+ EK ++
Sbjct: 488 GLFQPSFQ------QPFNNIATMPMTVPNNPALQKPNTSENVSCSHSISTSAQSSEKPDH 541
Query: 529 IKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRIS 588
K HQ +LFGQ I+ + G+ + K S+ H Q +S
Sbjct: 542 AKPHQLVLFGQTIQVDA---------------------GNENSEKKMSNHLSDLHLQGLS 580
Query: 589 IEKSSSSEFFWNRSFQVTES 608
+SS + F WN Q E+
Sbjct: 581 -SRSSDARFEWNAENQHEET 599
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/388 (53%), Positives = 263/388 (67%), Gaps = 30/388 (7%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADSE 71
LWHA AG MVQ+P +NS VFYFPQGHAEH+ VNF + S+IP I CRV ++++A+ E
Sbjct: 810 LWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSFIPCRVEDIRYMANHE 869
Query: 72 TDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVP 131
TDEVYAK++LVP+ N++ F+++ ++ + +K SFAKTLTQSDANNGGGFS P
Sbjct: 870 TDEVYAKLRLVPMNINQVSFDNDGVA--GINVSETKDKHQSFAKTLTQSDANNGGGFSCP 927
Query: 132 RYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKL 191
RYCAE IFPR+DY+ +PP Q + KDVHGE W FRH+YRGTP+RHLLTTGWS FV+ KKL
Sbjct: 928 RYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKL 987
Query: 192 VAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLRE 251
+GDS+VFLR+++G+L VGI R K GIG P+GGF+ F E
Sbjct: 988 ASGDSVVFLRSENGELRVGIWREKSGIG----------------ICPAPPYGGFTSFSEE 1031
Query: 252 EENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRAST 311
E+NK+ RNG N G S G G+VK V+EAV L + +PF+VVYYPR+ T
Sbjct: 1032 EDNKLRRNGKGN----GLLISDGMM--GRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGT 1085
Query: 312 PEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWR 371
PEF VK S + +++ W GMRFKM ETEDSSRISWF+GT++SVQ ADP SWP+S WR
Sbjct: 1086 PEFFVKTSLIGITLQIRWCPGMRFKMPIETEDSSRISWFIGTVASVQAADP-SWPDSLWR 1144
Query: 372 LLQVTWDEPDLLQNVKRVSPWLVELVSN 399
LLQ P Q +S L+ L +N
Sbjct: 1145 LLQ-----PSFQQPFNNISTMLMTLTNN 1167
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 345/722 (47%), Positives = 442/722 (61%), Gaps = 48/722 (6%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
EK +D QLW ACAGSMVQ+P + S + YFPQGHAE + S +FP + + CRV S+
Sbjct: 35 EKHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPDFPRALGPAGTVPCRVLSV 94
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
KFLAD ETDEV+A ++L P ++ EDN+ + EKPASFAKTLTQSDANN
Sbjct: 95 KFLADKETDEVFASLRLHPESGSD---EDND---RAAALSPSPEKPASFAKTLTQSDANN 148
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPRYCAETIFPRLDY+ DPPVQTV+AKDVHGE+WKFRHIYRGTPRRHLLTTGWST
Sbjct: 149 GGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWST 208
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN KKLVAGD+IVFLR+ G+LCVG+RR+ +G G GN + W+S + +
Sbjct: 209 FVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNA-DALLWHSASSRSSSRWELRP 267
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+ M NG+ G N G+ N +V + VL+A LAASGK FEVV
Sbjct: 268 PMDTGLSDGTLMGENGSSRSAGGGGGNGGGSFTRNRAKVTAKSVLDAATLAASGKAFEVV 327
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YYPRAST EFCV+A V+AA+ W GMRFKMAFETEDSSRISWFMGTIS+VQ ADPI
Sbjct: 328 YYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAADPIL 387
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR-LPQQLDF 423
WP+SPWR+LQV WDEPDLLQ V RVSPW VELVS +P + L PFS RKK R P
Sbjct: 388 WPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLP-MQLPPFSLPRKKFRQTPAPEGQ 446
Query: 424 PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQ-FGISSSDFHVNNKLQSGLF 482
F G T F+ LG ++P LSD+ AG+QGARH + +G++ S+ ++ SGL
Sbjct: 447 SFSGLPTT-TFANGVLGQANPWHGLSDDVPAGMQGARHERLYGLTFSECQ-PTRIHSGLL 504
Query: 483 LSSLQR----------FTPNSRDFDGILTSHTNSSENLSCLLT--MGNSNQN-----LEK 525
+ Q + + + L+T + N +QN +
Sbjct: 505 ENRYQAQDIPVAATLGYGATDLRLGNVFPQGGSGGGEQRTLVTTVLCNGSQNDSGVSCTE 564
Query: 526 SENIKKHQFLLFGQPIRT----EQQISHSCSDDVVSQ-------VLGKSSSDGHSDKVKA 574
S K+ FLLFG+ I T EQQ S S + S+ SS D H+D V+
Sbjct: 565 SSCNKQGTFLLFGKKIETARVQEQQNSAGSSSEATSRHNVPSQQPSASSSGDSHNDAVQQ 624
Query: 575 S---SDGSGSTHEQRISIE---KSSSSEFFWNRS--FQVTESGLDTGHCKVFLESEDVGR 626
+ + S H + K +S W + + + S ++ C+VF+ES DV R
Sbjct: 625 NVLLQENGESGHGGDVGGSKWLKKQASVLSWEKKDRLEGSSSDEESSQCRVFMESGDVKR 684
Query: 627 TLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLT 686
TLDLS SY+ELY++LA +F ++ + + V+Y+D+ G+ TG EP+++F+KS +RLT
Sbjct: 685 TLDLSSFGSYDELYKQLATVFCVDMAKISGRVVYKDSEGSTIHTGGEPYANFVKSVRRLT 744
Query: 687 IL 688
IL
Sbjct: 745 IL 746
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust.
Identities = 351/732 (47%), Positives = 447/732 (61%), Gaps = 83/732 (11%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS--VNFPSSSRIPPLIFCRV 61
+ ++D QLW ACAGSM +PP+ + V+YFPQGHAE + G+ V+ P R+P L+ CRV
Sbjct: 16 ADDAVDSQLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGAGAVDMP---RVPDLVPCRV 72
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
S+++F+AD ++DEV+AKI+L+P+ E D + + + D+++ KPASFAKTLTQ
Sbjct: 73 SAVRFMADPQSDEVFAKIRLLPLRRGEPVADVGEAAAAREPLQQDADNNKPASFAKTLTQ 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPR+CAETIFP LDY A+PPVQ++ +DVHGE +KFRHIYRGTPRRHLLT
Sbjct: 133 SDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRDVHGEEFKFRHIYRGTPRRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVG-----IRRAKKGIGGGN-EYPSS---GWN 230
TGWS FVNQKKL+AGDS+VFLRA G IRRA++ G + E PSS GW+
Sbjct: 193 TGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIRRARRVFCGADVEGPSSAASGWD 252
Query: 231 SNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLE 290
G +R GN + S N G N +V E V
Sbjct: 253 HYRG-------------LMR---------GNAS-----SGNDGGGKGNNNNKVTAEDVAA 285
Query: 291 AVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
A LAA+G+ FEVVYYPRASTPEFCV+A AVKAAM+V W GMRFKMAFETEDSSRISWF
Sbjct: 286 AARLAAAGQVFEVVYYPRASTPEFCVRAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWF 345
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
MGT++ V ADP+ WP SPWRLLQV+WDEP+LLQNVKRV PWLVELVS+MP +HL FSP
Sbjct: 346 MGTVAGVCAADPVHWPQSPWRLLQVSWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSP 405
Query: 411 ARKKLRLPQQLDFPFDGQ--FTMPLFSGNPLGPSS------------PLCCLSDNTSA-- 454
RKK R+P DFP DG F P F+ L PSS P A
Sbjct: 406 PRKKPRIPTCADFPLDGSHFFLQPPFAPLGLNPSSLAQHGHHGFSFFPFPGSGGTPPAPA 465
Query: 455 ----GIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENL 510
GIQGARHA FG S S + N SSL+ T + R + +
Sbjct: 466 PLAGGIQGARHAHFGPSPSSVDLRNSKHP---RSSLRPHT-DIRHPAAPALVVAPCAPGI 521
Query: 511 SCLLTMGNSNQNLEKSENI------KKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSS 564
S LT+GN ++ + + LFGQ I TE+Q+ + S+ + SS
Sbjct: 522 STDLTIGNGTSSVREDDVATCALPKAPPTLQLFGQEILTEEQMMKASSN--TGGLTLTSS 579
Query: 565 SDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFW-------NRSFQVTE-SGLDTGHCK 616
+ ++K S+GS S Q + +++S W N S Q +E GL G CK
Sbjct: 580 PNSETEKAADVSEGSDSVVTQGSTSSNNNNSTSSWRLRWFGDNGSGQASELLGLQPGQCK 639
Query: 617 VFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFS 676
VF+ES+ +GR LDLS LSS+EELY R++ MF IE +++ ++V Y+ A+G +K GDEPF
Sbjct: 640 VFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIESAELRNNVHYRSAAGEVKNVGDEPFR 699
Query: 677 DFMKSAKRLTIL 688
F+KSA+RLTI
Sbjct: 700 AFVKSARRLTIF 711
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 341/723 (47%), Positives = 436/723 (60%), Gaps = 51/723 (7%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
K +D QLW ACAGSMVQ+P + S + YFPQGHAE + S +FP + + CRV S+K
Sbjct: 36 KHLDQQLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPDFPRALGPAGTVPCRVLSVK 95
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLAD ETDEV+A ++L P ++ EDN+ + EKPASFAKTLTQSDANNG
Sbjct: 96 FLADKETDEVFASLRLHPESGSD---EDND---RAAAPSPSPEKPASFAKTLTQSDANNG 149
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPRYCAETIFPRLDY+ DPPVQTV+AKDVHGE+WKFRHIYRGTPRRHLLTTGWSTF
Sbjct: 150 GGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTF 209
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
VN KKLVAGD+IVFLR+ G+LCVG+RR+ +G G GN + W+S + +
Sbjct: 210 VNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNA-DALLWHSASSRSSSRWELRPP 268
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+ M NG+ G+ N G+ N +V + VL+A LAASGK FEVVY
Sbjct: 269 MDTGLSDGTLMRENGSSRSAGGGAGNGGGSFTRNRAKVTAKSVLDAATLAASGKAFEVVY 328
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
YPRAST EFCV+A V+AA+ W GMRFKMAFETEDSSRISWFMGTIS+VQ ADPI W
Sbjct: 329 YPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAADPILW 388
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR-LPQQLDFP 424
P+SPWR+LQV WDEPDLLQ V RVSPW VELVS +P + L PFS RK+ R P
Sbjct: 389 PSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLP-MQLPPFSLPRKRFRQTPAPEGQS 447
Query: 425 FDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQ-FGISSSDFHVNNKLQSGLFL 483
F G T F+ LG ++P LSD+ AG+QGARH + +G++ S+ N++ SGL
Sbjct: 448 FSGLPTT-TFANGVLGQANPWHGLSDDVPAGMQGARHERLYGLTFSECQ-PNRIHSGLLE 505
Query: 484 SSLQR----------FTPNSRDFDGILTSHTNSSENLSCLLT--MGNSNQN-----LEKS 526
+ Q + + + L+T + N +QN +S
Sbjct: 506 NRYQAQDIPVAATLGYGATDLRLGNVFPQGGSGGGEQRTLVTTVLCNGSQNDSGVSCTES 565
Query: 527 ENIKKHQFLLFGQPIRT----EQQISHSCSDDVVSQ-------VLGKSSSDGHSDKVKA- 574
K+ FLLFG+ I T EQQ S S + S+ SS D H+D V+
Sbjct: 566 SCNKQGTFLLFGKKIETARVQEQQNSAGSSSEATSRHNVPSQQPSASSSGDSHNDAVQQN 625
Query: 575 --------SSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGR 626
S G + + + S S +R + + S ++ C+VF+ES DV R
Sbjct: 626 VLLHENGDSGHGGDVGGSKWLKKQASVLSSEKKDR-LEGSSSDEESSQCRVFMESGDVKR 684
Query: 627 TLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFS-DFMKSAKRL 685
TLDLS SY+ELY++LA +F ++ + + V+Y+D+ G+ TG EP++ KS RL
Sbjct: 685 TLDLSSFGSYDELYKQLAAVFCVDVAKISGRVVYKDSEGSTIHTGGEPYAMRGGKSGHRL 744
Query: 686 TIL 688
L
Sbjct: 745 YSL 747
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 289/502 (57%), Positives = 346/502 (68%), Gaps = 26/502 (5%)
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
G TFVNQKKLVAGDSIVF+R ++GDLCVGIRRAKKG GG E+ + G
Sbjct: 140 GGGTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPPTPAAGG 199
Query: 241 PFGGFSCFLREEE--NKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+GGFS FLR ++ NKMA + G R RV+PE V+EA LA SG
Sbjct: 200 NYGGFSMFLRGDDDGNKMAAA------------ARGKVRA---RVRPEEVVEAANLAVSG 244
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+PFEVVYYPRASTPEFCVKA AV+AAMR W GMRFKMAFETEDSSRISWFMGT+S+VQ
Sbjct: 245 QPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQ 304
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WPNSPWRLLQV+WDEPDLLQNVKRVSPWLVELVSNMP IHL+PFSP RKKL +P
Sbjct: 305 VADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVP 364
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKL 477
+ P DGQF P+F GNPL P+C D T AGIQGARHAQFGIS SD H+ NKL
Sbjct: 365 LYPELPIDGQFPTPMFHGNPLARGVGPMCYFPDGTPAGIQGARHAQFGISLSDLHL-NKL 423
Query: 478 QSGLFLSSLQRFTP--NSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
QS L L + R G++ H + +++SCLLT+G+ N + Q +
Sbjct: 424 QSSLSPHGLHQLDHGMQPRIAAGLIIGHPAARDDISCLLTIGSPQNNKKSDAKKAPAQLM 483
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV--KASSDGSGSTHEQRISIEKSS 593
LFG+PI TEQQIS D S + KSSSDG+++ K++SD S Q + + S
Sbjct: 484 LFGKPILTEQQISLG---DAASVAVKKSSSDGNAENTVNKSNSDVSSPRSNQNGTTDNLS 540
Query: 594 SSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSD 653
+ +V + GL+TGHCKVF++SEDVGRTLDLSV+ SYEELYRRLA MF IE+++
Sbjct: 541 CGGVPLCQDNKVLDVGLETGHCKVFMQSEDVGRTLDLSVVGSYEELYRRLADMFSIEKAE 600
Query: 654 MLSHVLYQDASGAIKRTGDEPF 675
++SHV Y+DA+GA+K TGDEPF
Sbjct: 601 LMSHVFYRDAAGALKHTGDEPF 622
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/130 (56%), Positives = 100/130 (76%), Gaps = 5/130 (3%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS--VNFPSSSRIPPLIFC 59
+E +K +DPQLWHACAG MVQ+PP++S V+YFPQGHAEH+ G V FP R+P L+ C
Sbjct: 14 RESDKCLDPQLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHGPVEFP-GGRVPALVLC 72
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDF--EDNNLSLNSVGSDSESEKPASFAKTL 117
RV+ ++F+AD +TDEV+AKI+LVP+ ANE + + ++ + + ++ EKPASFAKTL
Sbjct: 73 RVAGVRFMADPDTDEVFAKIRLVPVRANEQGYAGDADDGIGAAAAAAAQEEKPASFAKTL 132
Query: 118 TQSDANNGGG 127
TQSDANNGGG
Sbjct: 133 TQSDANNGGG 142
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 326/689 (47%), Positives = 399/689 (57%), Gaps = 114/689 (16%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D QLWHACAG MVQ+P + + V YFPQGH E + + +F +S I CRV S+ FL
Sbjct: 12 LDAQLWHACAGGMVQLPQVGAKVIYFPQGHGEQAATTPDFSASMGPSGTIPCRVVSVNFL 71
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
AD+ETDEV+A+++L P + + N+++ S EKPASFAKTLTQSDANNGGG
Sbjct: 72 ADTETDEVFARMRLQPEGLHGL----NDMT-EEAPSSPPPEKPASFAKTLTQSDANNGGG 126
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPRYCAETIFP LDY++DPPVQTV+AKDVHG++WKFRHIYRGTPRRHLLTTGWSTFVN
Sbjct: 127 FSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTTGWSTFVN 186
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
QKKLVAGD+IVFLR+ G+LCVG+RR+ +G G N + GG S
Sbjct: 187 QKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGH------------------GGSS- 227
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYP 307
N ++R+G+ ++ SF N RV + VL+A ALA +GKPFEVVYYP
Sbjct: 228 ------NGVSRSGSQGASTTSSFAR------NRARVTAKSVLDAAALAVAGKPFEVVYYP 275
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
RAST EFCVKA VK A+ W GMRFKMAFETEDSSRISWFMGTI++V+ ADP+ WPN
Sbjct: 276 RASTAEFCVKAGLVKQALDHTWYAGMRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPN 335
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDG 427
SPWR VTWDEPDLLQ V RVSPW VELV+ +P + L PFS +KKLR Q + F G
Sbjct: 336 SPWR---VTWDEPDLLQGVSRVSPWQVELVATLP-MQLPPFSYPKKKLRAVQPQELHFAG 391
Query: 428 QFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQ 487
Q P G P L +N SAG+QGARH +F
Sbjct: 392 QLPTPW--GGP--------ALLENASAGMQGARHDRFN---------------------- 419
Query: 488 RFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQ--------FLLFGQ 539
P S DF G L L+ L G S + N K FLLFGQ
Sbjct: 420 --GPPSMDFRGRLLPPVAHGCGLTMGLMPGGSPTRDDGGSNSKSKLKSSPAPTTFLLFGQ 477
Query: 540 PIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFW 599
I S S + EQ ++ SS +
Sbjct: 478 SID--------------------------------PSSNSKAAQEQCVASASSSVEGYRQ 505
Query: 600 NRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVL 659
N E + T HCKVF E ++VGRTLDL+ SYEE+Y RLA MF + + + V+
Sbjct: 506 NEGGPWPELSIGTEHCKVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSVPAASFKNRVV 565
Query: 660 YQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
YQD G G EP+ +F+ + +RLTIL
Sbjct: 566 YQDGEGCTLPVGAEPYGNFVAAVRRLTIL 594
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 267/375 (71%), Positives = 298/375 (79%), Gaps = 34/375 (9%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCR 60
MKE +KS+DPQLWHACAG MVQIPPLNS VFYFPQGHAEHSL +V+FPSS +P L+ CR
Sbjct: 1 MKESDKSLDPQLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVDFPSSPPVPALVLCR 60
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V+SLKF+AD+ETDEVYAKI L+P+P E+D E + GSD+ +EKPASFAKTLTQS
Sbjct: 61 VASLKFMADTETDEVYAKILLMPLPNTELDLEH----VAVFGSDN-AEKPASFAKTLTQS 115
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
DANNGGGFSVPRYCAETIFP LDYT DPPVQTVVA DVHGE WKFRHIYRGTPRRHLLTT
Sbjct: 116 DANNGGGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLTT 175
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFVN KKLVAGDSIVFLR+++G LCVGIRRAK+G G G E G+
Sbjct: 176 GWSTFVNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPE--------------AGS 221
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
P F FLRE+E+KM N +G+ RG G++K E VL+A LAASG+P
Sbjct: 222 P---FLSFLREDESKMMM-----------MNRNGDWRGK-GKLKAEAVLQAATLAASGQP 266
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRASTPEFCVKAS+VKAAMRV W CGMRFKMAFETEDSSRISWFMGT+SSVQV
Sbjct: 267 FEVVYYPRASTPEFCVKASSVKAAMRVPWCCGMRFKMAFETEDSSRISWFMGTVSSVQVV 326
Query: 361 DPISWPNSPWRLLQV 375
DPI WPNSPWRL Q+
Sbjct: 327 DPIRWPNSPWRLFQL 341
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 519 bits (1337), Expect = e-144, Method: Compositional matrix adjust.
Identities = 289/489 (59%), Positives = 340/489 (69%), Gaps = 44/489 (8%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+K +D QLWHACAG MVQ+PP+ + V YFPQGH E + +FP S I CRV S+
Sbjct: 19 KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAAIPDFPRSGGT---ILCRVISV 75
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDF-----EDNNLSLNSVGSDSESEKPASFAKTLTQ 119
FLAD+ETDEVYAK+KL P A F +D L V S + EKPASFAKTLTQ
Sbjct: 76 DFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEEL----VSSPTVVEKPASFAKTLTQ 131
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+ DPPVQTV+AKDVHGEIWKFRHIYRGTPRRHLLT
Sbjct: 132 SDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLT 191
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFVNQKKLVAGD+IVFLR+ G+LCVG+RR+ +G G G+ S W+S+ G
Sbjct: 192 TGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGIS--WHSSPGQS--- 246
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
G+S L +GN GS S + N RV + VLEA +LAA+G+
Sbjct: 247 ----GYSELL---------SGN------GSGTSGASFARNRARVTSKSVLEAASLAAAGQ 287
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
FEVVYYPRAST EFCV+AS VKA++ W GMRFKMAFETEDSSRISWFMGTIS+VQ
Sbjct: 288 AFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQP 347
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADPI WP+SPWR+LQV+WDEPDLLQ V RVSPW VELVS +P + L PFS RKK+R P
Sbjct: 348 ADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLP-MQLPPFSLPRKKIR-PL 405
Query: 420 QLDF-PFDGQFT---MPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQF-GISSSDFHVN 474
L F G F M + N LG +P LS+ AG+QGAR +F G++ S+F
Sbjct: 406 DLQFGESQGGFMGLPMAALANNVLGQMNPWQSLSEEVPAGMQGARQERFYGLTLSEFQPK 465
Query: 475 NKLQSGLFL 483
++ +GLFL
Sbjct: 466 QRV-AGLFL 473
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDE 673
HCK+F E E+VGRTLDLS+ +YEELY RLA MF +++S + V+Y+D G+ G E
Sbjct: 690 HCKIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGRVVYRDLEGSTIYIGGE 749
Query: 674 PFSDFMKSAKRLTILMGSGSDSVGRT 699
P+ +F+KS +RLTIL S + R+
Sbjct: 750 PYGNFVKSVRRLTILAVPSSSTESRS 775
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 287/491 (58%), Positives = 340/491 (69%), Gaps = 33/491 (6%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+K +D QLWHACAG MVQ+PP+ + V YFPQGH E + +FP S I CRV S+
Sbjct: 60 KKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAAIPDFPRSGGT---ILCRVISV 116
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDF-----EDNNLSLNSVGSDSESEKPASFAKTLTQ 119
FLAD+ETDEVYAK+KL P A F +D L V S + EKPASFAKTLTQ
Sbjct: 117 DFLADAETDEVYAKMKLQPEVAPAPLFGTRMGDDEEL----VSSPTVVEKPASFAKTLTQ 172
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCAETIFPRLDY+ DPPVQTV+AKDVHGEIWKFRHIYRGTPRRHLLT
Sbjct: 173 SDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKDVHGEIWKFRHIYRGTPRRHLLT 232
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFVNQKKLVAGD+IVFLR+ G+LCVG+RR+ +G G G+ S W+S+ G
Sbjct: 233 TGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGPGNGDSGIS--WHSSPGQ--RS 288
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
P ++ E + L+ GS S + N RV + VLEA +LAA+G+
Sbjct: 289 LPQNSSRWEIKSESGY-----SELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQ 343
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
FEVVYYPRAST EFCV+AS VKA++ W GMRFKMAFETEDSSRISWFMGTIS+VQ
Sbjct: 344 AFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQP 403
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADPI WP+SPWR+LQV+WDEPDLLQ V RVSPW VELVS +P + L PFS RKK+R
Sbjct: 404 ADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLP-MQLPPFSLPRKKIR--- 459
Query: 420 QLDFPF---DGQFT---MPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQF-GISSSDFH 472
LD F G F M + N LG +P LS+ AG+QGAR +F G++ S+F
Sbjct: 460 PLDLQFGESQGGFMGLPMAALANNVLGQMNPWQSLSEEVPAGMQGARQERFYGLTLSEFQ 519
Query: 473 VNNKLQSGLFL 483
++ +GLFL
Sbjct: 520 PKQRV-AGLFL 529
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 59/86 (68%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDE 673
HCK+F E E+VGRTLDLS+ +YEELY RLA MF +++S + V+Y+D G+ G E
Sbjct: 746 HCKIFFEKEEVGRTLDLSLFGNYEELYDRLASMFTMDKSKLSGRVVYRDLEGSTIYIGGE 805
Query: 674 PFSDFMKSAKRLTILMGSGSDSVGRT 699
P+ +F+KS +RLTIL S + R+
Sbjct: 806 PYGNFVKSVRRLTILAVPSSSTESRS 831
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 276/486 (56%), Positives = 336/486 (69%), Gaps = 31/486 (6%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D QLWHACAG MVQ+P + + V YFPQGH E + + FP + + CRV S+ FL
Sbjct: 36 LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAASTPEFPRTLVPNGSVPCRVVSVNFL 95
Query: 68 ADSETDEVYAKIKLVP-IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGG 126
AD+ETDEV+A+I L P I ++ D D++L+ + EKPASFAKTLTQSDANNGG
Sbjct: 96 ADTETDEVFARICLQPEIGSSAQDLTDDSLASPPL------EKPASFAKTLTQSDANNGG 149
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GFS+PRYCAETIFP LDY DPPVQTV+AKDVHGE+WKFRHIYRGTPRRHLLTTGWSTFV
Sbjct: 150 GFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFV 209
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF---- 242
NQKKLVAGD+IVFLR G+LCVG+RR+ +G+ G E S + +N S + + +
Sbjct: 210 NQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNG-ESSSWHSSISNASTIRPSRWEVKG 268
Query: 243 -GGFSCFLRE-EENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
FS FL +N A N ++ + GS +S R + RV + VLEA ALA SG+
Sbjct: 269 TESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFAR-DRARVTAKSVLEAAALAVSGER 327
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
FEVVYYPRAST EFCVKA VK A+ W GMRFKMAFETEDSSRISWFMGTI++VQ A
Sbjct: 328 FEVVYYPRASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAA 387
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL--P 418
DP+ WP+SPWR+LQVTWDEPDLLQ V RVSPW +ELV+ +P + L P S +KKLR P
Sbjct: 388 DPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELVATLP-MQLPPVSLPKKKLRTVQP 446
Query: 419 QQLDFPFDGQFTMPL-----FSGN---PLGPSSPLCCLSDNTSAGIQGARHAQF-GISSS 469
Q+L G ++PL F G+ P G S L D+ S G+QGARH QF G+ +
Sbjct: 447 QELPLQPPGLLSLPLAGTSNFGGHLATPWGSS----VLLDDASVGMQGARHDQFNGLPTV 502
Query: 470 DFHVNN 475
DF +N
Sbjct: 503 DFRNSN 508
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 247/418 (59%), Positives = 292/418 (69%), Gaps = 25/418 (5%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D QLWHACAG MVQ+P + + V YFPQGH E + + FP + + CRV S+ FL
Sbjct: 27 LDAQLWHACAGGMVQLPHVGAKVVYFPQGHGEQAASTPEFPRTLVPNGSVPCRVVSVNFL 86
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
AD+ETDEV+A+I L P EI +L+ +S+ S EKPASFAKTLTQSDANNGGG
Sbjct: 87 ADTETDEVFARICLQP----EIGSSAQDLTDDSLAS-PPLEKPASFAKTLTQSDANNGGG 141
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FS+PRYCAETIFP LDY DPPVQTV+AKDVHGE+WKFRHIYRGTPRRHLLTTGWSTFVN
Sbjct: 142 FSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTTGWSTFVN 201
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
QKKLVAGD+IVFLR G+LCVG+RR+ +G+ G S G
Sbjct: 202 QKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVG------------- 248
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYP 307
+N A N ++ + GS +S R + RV + VLEA ALA SG+ FEVVYYP
Sbjct: 249 -----DNGYALNSSIRSENQGSPTTSSFAR-DRARVTAKSVLEAAALAVSGERFEVVYYP 302
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
RAST EFCVKA VK A+ W GMRFKMAFETEDSSRISWFMGTI++VQ ADP+ WP+
Sbjct: 303 RASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPS 362
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF 425
SPWR+LQVTWDEPDLLQ V RVSPW +ELV+ +P + L P S +KKLR Q + P
Sbjct: 363 SPWRVLQVTWDEPDLLQGVNRVSPWQLELVATLP-MQLPPVSLPKKKLRTVQPQELPL 419
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 250/391 (63%), Positives = 291/391 (74%), Gaps = 30/391 (7%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--IPPL 56
MKEV E+ +DPQLWHACAG MVQ+PP+ S V+YFPQGHAEH+ G + +P L
Sbjct: 1 MKEVAEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAADLAGARALPSL 60
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
+ C V+ ++FLAD ETDEV+AKI+LVP+ E++F + + SV EK +SFAKT
Sbjct: 61 VLCSVTGVRFLADPETDEVFAKIRLVPVAPGEVEFREPDEF--SVDPADAREKLSSFAKT 118
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHIYRGTPRRH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRH 178
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRR K+ GG E SGWN+
Sbjct: 179 LLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMEC-MSGWNAPG--- 234
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+G S FL++EE KM + S+G G RG G+VK V+ A +LAA
Sbjct: 235 -----YGALSAFLKDEEGKM-------MKSHG-----GYMRGR-GKVKITDVVNAASLAA 276
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
SG+PFEVVYYPRASTPEF VKA++V+ AMR W GMRFKMAFETEDSSRISWFMGTI+S
Sbjct: 277 SGQPFEVVYYPRASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIAS 336
Query: 357 VQVADPISWPNSPWRLLQVTWDE--PDLLQN 385
QVADPI WPNSPWRLLQV D P L+ N
Sbjct: 337 AQVADPIRWPNSPWRLLQVLLDHMFPILVCN 367
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 300/749 (40%), Positives = 398/749 (53%), Gaps = 159/749 (21%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+ P+LW ACAGSM +PP+ + V+YFPQGHAEH+ G+ R+PP + CRV++++ +
Sbjct: 48 VHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEHAGGAA---VDLRVPPFVPCRVAAVRLM 104
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE------------------- 108
AD +TD+VYA+I+LVP+ A E + + +L V +D S
Sbjct: 105 ADPDTDDVYARIRLVPLRAWEPVADVGDAAL--VKTDGSSRGGADGDGDGDAGGGQQQQP 162
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
+P SFAKTLT SDANNGGGFSVPR+CA +IFP LDY+ PPVQ V A+DVHG W FRHI
Sbjct: 163 RPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVHGVEWTFRHI 222
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGI---GGGNEYP 225
YR TPRR LL G +RRAK+ GGG
Sbjct: 223 YRSTPRRTLLNPG---------------------------CRLRRAKRVFCRRGGG---- 251
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
SN G V G + G+V
Sbjct: 252 ----GSNAGVAVAGP--------------------------------------SDGKVPA 269
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
E V+EA LAA+G+PFEVV+YPRAS PEF V+A+AVK +M+ W G+RFKMAFETED S
Sbjct: 270 EDVVEAARLAAAGQPFEVVHYPRASAPEFVVRAAAVKESMQAPWCPGLRFKMAFETEDLS 329
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-- 403
RISWFMGTI+ V+ ADP WP SPWRLLQVTWDEP+LL+NV RV PW VELVS+MP +
Sbjct: 330 RISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVCPWRVELVSSMPKLPR 389
Query: 404 ---------HLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDN--- 451
++ R + QQL FD F P PL P S + N
Sbjct: 390 FSPPPRKKPRTPSYTETRSER---QQL---FDPAFPFPPTHPLPLAPPSLALLPAPNHDG 443
Query: 452 ----------------TSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRD 495
+AGIQGARH QF SD H+++ LQ L S +Q
Sbjct: 444 NRHDFVPSFPVIPDSIAAAGIQGARHLQFAPFFSDLHLSD-LQRSLLFSGIQ-------- 494
Query: 496 FDGILTSHTNSSENLSCLLTMGNSNQNLEKSE-----NIKKHQFLLFGQPIRTEQQISHS 550
+ ++ L +G+ SE ++K +LFG+ I TE+Q+ +
Sbjct: 495 ---PADHQAPPAPRIATGLKIGSPAPRSPSSEAKNGDDVKPPVIMLFGREILTEEQMKSN 551
Query: 551 CSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS-EFFWNRSFQVTESG 609
S G S D +K ++SD SGS +K+S S +W+ ++
Sbjct: 552 -----SSTRSGSSKPDCDDEKTSSTSDRSGSDVSHGSPAKKNSPSLTLWWSGDSSLSAFA 606
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKR 669
L+ G CKVF+ES+ +GR LDLS LSS+EEL RL+ FGI +D+ SH++Y+ +G +K
Sbjct: 607 LEPGQCKVFVESDTLGRNLDLSALSSFEELCARLSSFFGINNADLRSHMVYRTIAGEVKH 666
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GDEPFS F+KSA+R+TIL +GS++ G+
Sbjct: 667 VGDEPFSVFVKSARRITILTDAGSNNTGK 695
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 472 bits (1215), Expect = e-130, Method: Compositional matrix adjust.
Identities = 242/384 (63%), Positives = 283/384 (73%), Gaps = 35/384 (9%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-----VNFPSSSRI 53
MKE E+ +DPQLWHACAG MVQ+PP+ S V+YFPQGHAEH+ G + + +
Sbjct: 1 MKEAGEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPL 60
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES--EKPA 111
PPL+ C V+ ++FLAD ETDEV+AKI+LVP E++F + G D E EK +
Sbjct: 61 PPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPR----EFGIDPEDAREKLS 116
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHI+RG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
TPRRHLLTTGWS FVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E SGWN+
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMEC-ISGWNA 235
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
+G S FL++EE K+ + G RG G+V+ V+EA
Sbjct: 236 PV--------YGALSAFLKDEEGKITK------------GPGGYMRGR-GKVEITDVVEA 274
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
+LAASG+PFEVVYYPRASTPEF VKA++V+ AMR W GMRFKMAFETEDSSRISWFM
Sbjct: 275 ASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFM 334
Query: 352 GTISSVQVADPISWPNSPWRLLQV 375
GTI+S QVAD I WPNSPWRLLQV
Sbjct: 335 GTIASAQVADTIRWPNSPWRLLQV 358
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/390 (62%), Positives = 283/390 (72%), Gaps = 33/390 (8%)
Query: 1 MKEV-----EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--- 52
MKEV + +DPQLWHACAG MVQ+P S V+YF QGHAEH+ G +++
Sbjct: 1 MKEVGEVEEVRCLDPQLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELG 60
Query: 53 ---IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFE--DNNLSLNSVGSDSES 107
+PPL+ CRV ++FLAD ++DEVYAKI+L P+ E +F D L + G +E
Sbjct: 61 PRALPPLVLCRVEGVQFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGAAGDAAEP 120
Query: 108 --EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
EKP SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHG +WKF
Sbjct: 121 SPEKPTSFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKF 180
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYP 225
RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E
Sbjct: 181 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMEC- 239
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
SGWN+ G GGFS FL+EEE+K+ + G V+
Sbjct: 240 MSGWNA------PGYGGGGFSAFLKEEESKLMKGHGGGGYMKGKGK-----------VRM 282
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
V+EA +LA+SG+PFEV YYPRASTP+F VKA++V+AAMR+ W GMRFKMAFETEDSS
Sbjct: 283 ADVVEAASLASSGQPFEVAYYPRASTPDFVVKAASVQAAMRIQWCSGMRFKMAFETEDSS 342
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQV 375
RISWFMGTISSVQVADP WPNSPWRLLQV
Sbjct: 343 RISWFMGTISSVQVADPNRWPNSPWRLLQV 372
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/370 (62%), Positives = 271/370 (73%), Gaps = 35/370 (9%)
Query: 1 MKEV--EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-----VNFPSSSRI 53
MKE E+ +DPQLWHACAG MVQ+PP+ S V+YFPQGHAEH+ G + + +
Sbjct: 1 MKEAGEERCLDPQLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPL 60
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES--EKPA 111
PPL+ C V+ ++FLAD ETDEV+AKI+LVP E++F + G D E EK +
Sbjct: 61 PPLVLCTVAGVRFLADPETDEVFAKIRLVPAAPGEVEFGEPR----EFGIDPEDAREKLS 116
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SFAKTLTQSDANNGGGFSVPRYCAETIFP+LDY ADPPVQTV+AKDVHGE+WKFRHI+RG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
TPRRHLLTTGWS FVNQKKLVAGDSIVFLR + G+LCVGIRRAK+ GG E SGWN+
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMEC-ISGWNA 235
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
+G S FL++EE K+ + G RG G+V+ V+EA
Sbjct: 236 PV--------YGALSAFLKDEEGKITK------------GPGGYMRGR-GKVEITDVVEA 274
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
+LAASG+PFEVVYYPRASTPEF VKA++V+ AMR W GMRFKMAFETEDSSRISWFM
Sbjct: 275 ASLAASGQPFEVVYYPRASTPEFVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFM 334
Query: 352 GTISSVQVAD 361
GTI+S QVAD
Sbjct: 335 GTIASAQVAD 344
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 231/380 (60%), Positives = 274/380 (72%), Gaps = 40/380 (10%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLG-SVNFPSSSRIPPLIFCRVS 62
E+ +D QLW ACAG M +PP+ + V+YFPQGHAEH+LG + S++R+P L+ CRV+
Sbjct: 14 AERCVDRQLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAAPELSAARVPALVPCRVA 73
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
S++++AD +TDEV+A+I+LVP+ A E D ++ + + E EKPASFAKTLTQSDA
Sbjct: 74 SVRYMADPDTDEVFARIRLVPLRAAE----DGDVEEDGAAAGEEHEKPASFAKTLTQSDA 129
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
NNGGGFSVPRYCAETIFPRLDY ADPPVQTVVAKDVHG W FRHIYRGTPRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTTGW 189
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS----GWNSNNGSCVT 238
STFVNQKKLVAGDSIVFLR GDL VGIRRAK+G GG GW+
Sbjct: 190 STFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQ------- 242
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+GG M N+ + G G+V+ E ++EA LA G
Sbjct: 243 ---YGGL----------------MRGNASPCAAAKGR-----GKVRAEDLVEAARLANGG 278
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+PFEVVYYPRASTPEFCV+A+AV+AAMRV W GMRFKMAFETEDSSRISWFMGT++SVQ
Sbjct: 279 QPFEVVYYPRASTPEFCVRAAAVRAAMRVQWCPGMRFKMAFETEDSSRISWFMGTVASVQ 338
Query: 359 VADPISWPNSPWRLLQVTWD 378
VADPI WP SPWRLLQV ++
Sbjct: 339 VADPIRWPQSPWRLLQVRYN 358
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/376 (56%), Positives = 266/376 (70%), Gaps = 36/376 (9%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKF 66
S+D QLW ACAGSM +PP+ + V+YFPQGHAE + +V+ SS+R+PPL+ CRV +++F
Sbjct: 18 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDL-SSARVPPLVPCRVVAVRF 76
Query: 67 LADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+AD+E+DEV+AKI+LVP+ + +D + + ++ +P SFAKTLTQSDANN
Sbjct: 77 MADAESDEVFAKIRLVPLRPGDAVVDVGEAAAAEARREEENSRPRPTSFAKTLTQSDANN 136
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CAETIFP LDY+++PPVQ+V AKDVHG W FRHIYRGTPRRHLLTTGWS
Sbjct: 137 GGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTPRRHLLTTGWSP 196
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG---IGGGNEYPSS--GWNSNNGSCVTG 239
FVN+K+L AGDSIVF+R + G++ VG+RRAK+G IGG +E SS GW+ G
Sbjct: 197 FVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPGWDQYRG----- 251
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
M RN ++G G+V PE VL A A +G+
Sbjct: 252 ---------------LMRRNATA--------TATGGRTPPKGKVPPENVLTAATRATTGQ 288
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEV+YYPRASTPEFCV+A+AV+ AM V W GMRFKMAFETEDSSRISWFMGT++ VQ
Sbjct: 289 PFEVLYYPRASTPEFCVRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQA 348
Query: 360 ADPISWPNSPWRLLQV 375
+DP+ WP SPWRLLQV
Sbjct: 349 SDPVRWPQSPWRLLQV 364
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/485 (49%), Positives = 302/485 (62%), Gaps = 66/485 (13%)
Query: 279 NGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMA 338
N +V + V+E+ LAA+G+PFEVVYYPRASTPEFCVKA AV AA+RV W GMRFKMA
Sbjct: 45 NRSKVSAKSVVESATLAAAGQPFEVVYYPRASTPEFCVKAQAVDAALRVQWSAGMRFKMA 104
Query: 339 FETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
FETEDSSRISWFMGTISSVQ+ADP+ WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE+VS
Sbjct: 105 FETEDSSRISWFMGTISSVQLADPVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEVVS 164
Query: 399 NMPVIHLSPFSPARKKLRLPQQLDFPFDGQ-----FTMPLFSGNPLGPSSPLCCLSDNTS 453
+MP I L+PF+ +KKLR+ Q + +GQ M + N LG +P LS+N
Sbjct: 165 SMPPIQLTPFTLPKKKLRVTQHPELQIEGQGIMGGLQMATLTNNVLGQFNPWHSLSENIP 224
Query: 454 AGIQGARHAQ-FGISSSDFHVNNKLQSGLFLSSLQR------FTPNSRDFD-GILTSHTN 505
AG+QGARH +GI+ SDFH +K+QSGLFL +L TP S + + G + H
Sbjct: 225 AGMQGARHGHIYGIALSDFH-PDKVQSGLFLDNLYYQDQGALSTPVSTELNIGSFSQHDR 283
Query: 506 SS--ENLSCLLTMGNSNQNLEKSEN-------IKKHQFLLFGQPIRTEQQISH------- 549
SS +NLSCLL MGNS+Q+ +K+ N IK FLLFG+PI TEQ +
Sbjct: 284 SSVQDNLSCLLMMGNSSQSEQKTSNGKAGSSTIKSAPFLLFGKPIHTEQSVKSQQKQQSG 343
Query: 550 -SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQ---- 604
S S+ Q + + S G + + QR+ ++S ++ N +
Sbjct: 344 LSSSEGPGFQTVNDTGSPGITSNSSTDVNPEILERAQRVMTDRSGVTKLTGNSDLKLYHG 403
Query: 605 -----VTESGL-------DTG-------------------HCKVFLESEDVGRTLDLSVL 633
V +G+ D G HCKVF+ESEDVGRTLDLS+
Sbjct: 404 ETLDSVGTNGIVSLPWFKDQGAMLSLEKNREGKALEDSILHCKVFMESEDVGRTLDLSLF 463
Query: 634 SSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGS 693
SSYE+LY RLA MFGIE ++ + VLY+D G ++ TGDEP+ DFMK+ +RLTIL S S
Sbjct: 464 SSYEQLYHRLAKMFGIEELELSNRVLYKDTDGTVRHTGDEPYRDFMKTVRRLTILSDSSS 523
Query: 694 DSVGR 698
D++GR
Sbjct: 524 DNMGR 528
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/367 (57%), Positives = 260/367 (70%), Gaps = 20/367 (5%)
Query: 9 DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLA 68
D +LW ACAG+MV++P ++S V YFPQGHAEH+ +V F S +IP I CRVSS+K++A
Sbjct: 17 DSRLWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVKIPSYIPCRVSSIKYMA 76
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGF 128
+ ETDEV+AKI+L P+ +E + +GSD+ S KP SFAKTLTQSDANNGGGF
Sbjct: 77 ERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDN-SRKPLSFAKTLTQSDANNGGGF 135
Query: 129 SVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQ 188
SVP+ CA+TIFP LDY +PPVQT+ A D+HG+ W+FRHIYRGTP RHLLTTGWSTFVNQ
Sbjct: 136 SVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTPERHLLTTGWSTFVNQ 195
Query: 189 KKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCF 248
KKLVAGDSIVFLR ++ + +GIRR KK S W + G+ P GGFS F
Sbjct: 196 KKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSVGNLTI--PRGGFSAF 253
Query: 249 LREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPR 308
LR++ N NS S + GN VK E V+EA LA +G+PFEV++YP+
Sbjct: 254 LRDDHNT---------NSSWSLINRGN-------VKAESVIEATKLATNGQPFEVIFYPQ 297
Query: 309 ASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNS 368
++TPEF VKAS VKAA+++ W GMRFKM FETED ISWFMGTISSVQ DP WP+S
Sbjct: 298 STTPEFFVKASRVKAALQIPWCSGMRFKMPFETEDLV-ISWFMGTISSVQANDPSQWPDS 356
Query: 369 PWRLLQV 375
PWR+LQV
Sbjct: 357 PWRMLQV 363
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/370 (55%), Positives = 265/370 (71%), Gaps = 36/370 (9%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
+S+D QLW ACAGSM +PP+ + V+YFPQGHAE + +V+ S++ +P L+ CRVS+++
Sbjct: 18 RSVDAQLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVDL-SAACVPALLPCRVSAVR 76
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
F+AD+ +DEV+AKI+LVP+ + + + + D + KPASFAKTLTQSDANNG
Sbjct: 77 FMADAHSDEVFAKIRLVPLRHGDPAVDVGDAAAQGRPQD-DRPKPASFAKTLTQSDANNG 135
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR+CAETIFP LDY+++PPVQ++V +DVHG+ +KFRHIYRGTPRRHLLTTGWS F
Sbjct: 136 GGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPRRHLLTTGWSNF 195
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
VNQKKL+AGDSIVFLR+ G++ VG+RRAK+ + SGW+ G
Sbjct: 196 VNQKKLLAGDSIVFLRSDGGEVHVGVRRAKRVF---CDEGHSGWDHYRG----------- 241
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+ R GN GS +++ G+V E V+ A LAA+G+PFEVVY
Sbjct: 242 ----------LMRGGNA-----GSGDAAAK-----GKVPAEDVVAAARLAAAGQPFEVVY 281
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
YPRASTPEFCV+A AV+AAM+V W GMRFKMAFETEDSSRISWFMGT++ + ADP W
Sbjct: 282 YPRASTPEFCVRAGAVRAAMQVQWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRW 341
Query: 366 PNSPWRLLQV 375
P SPWRLLQV
Sbjct: 342 PQSPWRLLQV 351
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 223/477 (46%), Positives = 288/477 (60%), Gaps = 44/477 (9%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRI------PPLIFC 59
+ +D ++W ACAGS VQIP +NS V+YFPQGH E S S + SS + P+I C
Sbjct: 12 RRVDRRIWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPC 71
Query: 60 RVSSLKFLADSETDEVYAKIKLVPI----PANEIDFEDNNLSLN-SVGSDSESEKPASFA 114
++S+++FLAD TDEVY K+ L PI P+ + NL + D + +K +FA
Sbjct: 72 QISAVQFLADPVTDEVYTKLLLFPIDSFNPSVPVLEHSGNLEQHHGYDYDDDEDKIVAFA 131
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
K LT SDANNGGGFSVPR+CA++IFP L+Y A+PPVQT+ D+HG W FRHIYRGTPR
Sbjct: 132 KILTPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPR 191
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLLTTGWS FVN KKL+AGDS+VF+R G + +G+RRA + GG++ + W
Sbjct: 192 RHLLTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSD--CARWREQI- 248
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
+C G GG ++ +E +RNG G+V PE V+EAV
Sbjct: 249 ACFGG---GGGDVKMKVKEEGYSRNGR-------------------GKVSPEAVMEAVER 286
Query: 295 AASGKPFEVVYYPRAS-TPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
AA G FEVVYYPRA +F V+ V A+ V W GMR KMA ETEDSSR++WF GT
Sbjct: 287 AAQGFSFEVVYYPRAGWYSDFVVRTDVVDGALAVCWSAGMRVKMAMETEDSSRMTWFQGT 346
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I+S + D W SPWR+LQV WDEP++LQN KRVSPW VE VS P +H F PA K
Sbjct: 347 IASASLPDCGLWRGSPWRMLQVAWDEPEVLQNAKRVSPWQVEYVSPSPPLH-GAFPPA-K 404
Query: 414 KLRLPQQLDFPFDGQ----FTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGI 466
K R P+ F DG+ F M + + +G + + AG+QGAR F +
Sbjct: 405 KFRFPENSGFLTDGEGELFFPMSGLTNSTMGNINQSLNYH-SFPAGMQGARQNPFSV 460
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 374 bits (960), Expect = e-100, Method: Compositional matrix adjust.
Identities = 243/555 (43%), Positives = 323/555 (58%), Gaps = 45/555 (8%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-PLIFCRVSSLK 65
S++P+LW A AG+ VQIP +NS V+YFPQGH + + N S + P I C VS++
Sbjct: 15 SLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPNNLSPLLLSRPYILCSVSAVH 74
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLAD +TDEV+AK+ L P+ DF N + + +D + E+ +SFAK LT SDANNG
Sbjct: 75 FLADPKTDEVFAKLFLQPLN----DFTVNFPRIPVIEAD-DGERISSFAKILTPSDANNG 129
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR+CA++IFP LDY+ DPP+Q ++ DVHG W+FRHIYRGTPRRHLLTTGWS F
Sbjct: 130 GGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPRRHLLTTGWSKF 189
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
VN KKLVAGDS+VF++ G + +GIRRA + + N S + + C+ P G
Sbjct: 190 VNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFV--PNRTSSGVCSDVSRLCL---PICGV 244
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+ +EE + +F+ G G++ P V EA +AA G FEVVY
Sbjct: 245 RSRVDDEEKLVEEK---------AFSRHGK-----GKLSPVAVAEAAEMAAQGMGFEVVY 290
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
YPRA +F +KA V AAM V W GMR KMA ET+DSSR +WF G +S V V D +W
Sbjct: 291 YPRAGWSDFVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAW 350
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF 425
SPWR+L +TWDEP++LQ K VSPW VEL+S P +H +PF P ++ + L
Sbjct: 351 RGSPWRMLHITWDEPEVLQTSKWVSPWQVELLSTTPSLH-TPFPPLKRTRGVSGVLTDGD 409
Query: 426 DGQFTMPLFSGNPLGP-SSPLCCLSDNTSAGIQGARHAQFGISS-SDFHVNN-KLQSGLF 482
F++ F+ + G + PL S AG+QGARH F +SS S+F +N +L G
Sbjct: 410 GDPFSITGFTNSTTGQLNQPLLSYS-TFPAGMQGARHDLFSVSSFSNFPGDNFRLCMGNS 468
Query: 483 LSSLQRFTPNSRDFDGILTSHTNSS-----ENLSCLLTMG-----NSNQNLEKSENIKKH 532
S P + F L ++ S E+ S L + G N N N K I
Sbjct: 469 FGS--NTVPGLKSFSTDLNVGSSQSGDFSPESQSSLPSFGTDFVRNYNCNSMKPGPIT-- 524
Query: 533 QFLLFGQPIRTEQQI 547
F LFG I+TEQ +
Sbjct: 525 -FQLFGAVIQTEQPV 538
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 227/575 (39%), Positives = 312/575 (54%), Gaps = 59/575 (10%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPP-LIFC 59
+ +V + IDP++W ACAG+ V+IP L S V+Y+PQGH EH PSSS + I C
Sbjct: 7 IADVHRVIDPKIWRACAGASVKIPALFSRVYYYPQGHVEHCC-----PSSSAVTASPIAC 61
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPA-NEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
VSS+ LAD TDEV+A + L P A ++ F + + ESEK +FAK LT
Sbjct: 62 VVSSIDLLADPITDEVFAHLTLHPAAAQDQFQFPPQS----RFEEEDESEKVVTFAKVLT 117
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SDANNGGGFSVPRYCA+++FP LD+ ADPPVQ + DVHG +W FRHIYRGTPRRHLL
Sbjct: 118 ASDANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLL 177
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FVN KKL+ GDS+VF+R ++ +G+RRA P S N + GS
Sbjct: 178 TTGWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRA----------PIS--NKSGGSSYY 225
Query: 239 GNPF--GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
G+ + GG+ +E+ + R M G++ E V EA+ A+
Sbjct: 226 GDEYFPGGYYGVKKEDGGEKFRRVGM------------------GKLTAEAVSEAIGKAS 267
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
G PFEVVYYP A EF V+A V+A+ V+W G R KMA ETEDSSRI+WF G +S+
Sbjct: 268 RGLPFEVVYYPTAGWSEFVVRAEDVEASTNVYWTPGTRVKMAMETEDSSRITWFQGIVSA 327
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
W+ LQ+TWDEP++LQN+KRV+PW VE V+ + + P K+ +
Sbjct: 328 TF--------QETWKQLQITWDEPEILQNLKRVNPWQVEAVTASSTQLHATYPPPPKRSK 379
Query: 417 LPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTS--AGIQGARHAQFGI--SSSDFH 472
P G+ ++ G P+ T+ AG+QGARH +FG +S+ F
Sbjct: 380 YPHASSGVLSGEEGEMIYYGRGQQTMDPIPYGYTYTTVPAGMQGARHYEFGSYNNSTGFI 439
Query: 473 VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKH 532
N F S L R +++ + S+ LS N + + + N +
Sbjct: 440 GENAHPEFNFFSPLPGL---GRVSTQMMSFGSPPSDELSPNSNTTNVSSGNDAAGNNRGI 496
Query: 533 QFLLFGQPIRTEQQISHSCSDDVVSQVLG-KSSSD 566
F LFG+ I ++ ++ + + G K SSD
Sbjct: 497 SFQLFGKVINVQEPAESGVAESSLCEEDGSKESSD 531
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 240/575 (41%), Positives = 308/575 (53%), Gaps = 71/575 (12%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIF------C 59
+ +DP +W ACAG V IP ++S V+YFPQGH E + S + PL+F C
Sbjct: 10 RPLDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQA------SSPPVLSPLVFSKPSVLC 63
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA------SF 113
RV ++ FLAD +TDEV+AKI+L P+ + +E + VG + ++ SF
Sbjct: 64 RVVAVWFLADQDTDEVFAKIRLEPVGRS---WESGTMERRRVGDGDDDKEDEGEDKVMSF 120
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SDANNGGGFSVPR+CA+ IFP L++ ADPPVQ ++ D+ G W FRHIYRGTP
Sbjct: 121 VKILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTP 180
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFL-RAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
RRHLLTTGWS FVN KKLVAGDS+VF+ R + +L +G+RR + WN N
Sbjct: 181 RRHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDAR------------WNRN 228
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+ A G + GS G +R + GRV+ E V A
Sbjct: 229 G----------------ERWSFRSALAGAVKAKEVGSIE--GFSRSSSGRVRAEEVAVAA 270
Query: 293 ALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
LAA G PFEVVYYPR + +F VKA V+ A+ V W GMR KMA ETEDSS+ S F G
Sbjct: 271 ELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQG 330
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
T+SS V D W S WR+LQVTWDEP++LQNV RVSPW VELV MP P
Sbjct: 331 TVSSATVMDNGPWRGSLWRMLQVTWDEPEVLQNVMRVSPWQVELV--MPTPPFHTTPPPA 388
Query: 413 KKLRLPQQLDFPFDGQ----FTMPLFSGNPLGPSSPLCCLSDNT-SAGIQGARHAQFGIS 467
K+ R+ Q + P DG+ F M L PS L+ NT AG+QGAR F +S
Sbjct: 389 KRFRIAQSPELPSDGEGEIFFPMADTVMGILNPS----LLNHNTFPAGMQGARQDSFYVS 444
Query: 468 SSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLS--------CLLTMGNS 519
S + ++SL L ++ S+NLS T
Sbjct: 445 SLSNLTSENTHQMCTINSLDDMATKLNTVSTELNIGSSLSDNLSPDSQGSVHFFGTKPVG 504
Query: 520 NQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDD 554
NQ+ S + H F LFG+ I +Q + +CS D
Sbjct: 505 NQDGNSSTKVGIHSFQLFGKVIHIKQPVEGNCSAD 539
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 206/476 (43%), Positives = 277/476 (58%), Gaps = 56/476 (11%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
+ +DP++W ACAG+ VQIP L S V+YFPQGH EH ++ SS P + C ++S++
Sbjct: 14 RQVDPRIWRACAGASVQIPLLYSRVYYFPQGHVEHCCPLISTLPSSTSP--VPCLITSIQ 71
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LAD TDEV+A + L P+ + + + G ++ K +FAK LT SDANNG
Sbjct: 72 LLADPITDEVFAHLVLQPVTQEQFTPTNYSRFGRYDGDVDDNNKVTTFAKILTPSDANNG 131
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR+CA+++FP LD+ DPPVQ + D+HG +W FRHIYRGTPRRHLLTTGWS F
Sbjct: 132 GGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHLLTTGWSKF 191
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRA-------KKGIGGGNEYPSSGWNSNNGSCVT 238
VN KKL+AGDS+VF++ ++ +G+RR GG+EY +G+ S
Sbjct: 192 VNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEY--NGYYSQ------ 243
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
S +E++ + +F SG G++ E V EA+ AA G
Sbjct: 244 -------SSVAKEDDGSAKK----------TFRRSGK-----GKLTAEAVTEAINRAAKG 281
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV- 357
PFEV YYP A EF V+A V+++M V W G R KMA ETEDSSRI+WF G +SS
Sbjct: 282 LPFEVAYYPTAGWSEFVVRAEDVESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTY 341
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
Q P W SPW+ LQ+TWDEP++LQNVKRV+PW VE+V+N +H + F PA K+L+
Sbjct: 342 QETGP--WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIVANATQLHAT-FPPA-KRLKY 397
Query: 418 PQ--------QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
PQ D P+ + + +P SP AG+QGAR FG
Sbjct: 398 PQPGGFLSGDDGDIPYSQRGLSSAAAPDP----SPYMFPYSTFPAGMQGARQYDFG 449
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/468 (43%), Positives = 276/468 (58%), Gaps = 37/468 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+ +DP +W ACAG+ VQIP L+S V+YFPQGH EH ++ SS P + C ++S+
Sbjct: 13 HREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--VPCIITSI 70
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ LAD TDEV+A + L P+ + + + G ++ K +FAK LT SDANN
Sbjct: 71 QLLADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVDDNNKVTTFAKILTPSDANN 130
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CA+++FP L++ DPPVQ + D+HG +W FRHIYRGTPRRHLLTTGWS
Sbjct: 131 GGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSK 190
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN KKL+AGDS+VF+R ++ +G+RR G G N +
Sbjct: 191 FVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNG--------YYS 242
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
S +E++ + +F SGN G++ E V +A+ A+ G PFEVV
Sbjct: 243 QSSVAKEDDGSPKK----------TFRRSGN-----GKLTAEAVTDAINRASQGLPFEVV 287
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV-QVADPI 363
+YP A EF V+A V+++M ++W G R KMA ETEDSSRI+WF G +SS Q P
Sbjct: 288 FYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP- 346
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF 423
W SPW+ LQ+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ
Sbjct: 347 -WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGG 403
Query: 424 PF---DGQFTMP---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
DG+ P L S PS + S AG+QGAR FG
Sbjct: 404 FLSGDDGEILYPQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 450
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/468 (43%), Positives = 276/468 (58%), Gaps = 37/468 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+ +DP +W ACAG+ VQIP L+S V+YFPQGH EH ++ SS P + C ++S+
Sbjct: 13 HREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--VPCIITSI 70
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ LAD TDEV+A + L P+ + + + G ++ K +FAK LT SDANN
Sbjct: 71 QLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANN 130
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CA+++FP L++ DPPVQ + D+HG +W FRHIYRGTPRRHLLTTGWS
Sbjct: 131 GGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSK 190
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN KKL+AGDS+VF+R ++ +G+RR G G N +
Sbjct: 191 FVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNG--------YYS 242
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
S +E++ + +F SGN G++ E V +A+ A+ G PFEVV
Sbjct: 243 QSSVAKEDDGSPKK----------TFRRSGN-----GKLTAEAVTDAINRASQGLPFEVV 287
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV-QVADPI 363
+YP A EF V+A V+++M ++W G R KMA ETEDSSRI+WF G +SS Q P
Sbjct: 288 FYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP- 346
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF 423
W SPW+ LQ+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ
Sbjct: 347 -WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGG 403
Query: 424 PF---DGQFTMP---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
DG+ P L S PS + S AG+QGAR FG
Sbjct: 404 FLSGDDGEILYPQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 450
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 203/468 (43%), Positives = 276/468 (58%), Gaps = 37/468 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+ +DP +W ACAG+ VQIP L+S V+YFPQGH EH ++ SS P + C ++S+
Sbjct: 13 HREVDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--VPCIITSI 70
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ LAD TDEV+A + L P+ + + + G ++ K +FAK LT SDANN
Sbjct: 71 QLLADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANN 130
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CA+++FP L++ DPPVQ + D+HG +W FRHIYRGTPRRHLLTTGWS
Sbjct: 131 GGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSK 190
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN KKL+AGDS+VF+R ++ +G+RR G G N +
Sbjct: 191 FVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNG--------YYS 242
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
S +E++ + +F SGN G++ E V +A+ A+ G PFEVV
Sbjct: 243 QSSVAKEDDGSPKK----------TFRRSGN-----GKLTAEAVTDAINRASQGLPFEVV 287
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV-QVADPI 363
+YP A EF V+A V+++M ++W G R KMA ETEDSSRI+WF G +SS Q P
Sbjct: 288 FYPAAGWSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP- 346
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF 423
W SPW+ LQ+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ
Sbjct: 347 -WRGSPWKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGG 403
Query: 424 PF---DGQFTMP---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
DG+ P L S PS + S AG+QGAR FG
Sbjct: 404 FLSGDDGEILYPQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 450
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 232/580 (40%), Positives = 305/580 (52%), Gaps = 82/580 (14%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
+ +DPQ+W ACAG+ VQIP L S V+YFPQGH EHS S S S P + C VS+++
Sbjct: 13 REVDPQIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPSSLISSFSTAAP-VPCVVSAVE 71
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLS------LNSVGSDSESEKPASFAKTLTQ 119
LAD TDEV+A + L PI F +N S + S+S K +FAK LT
Sbjct: 72 LLADPITDEVFAHLALQPISPEH--FSPSNFSGFGSDDDDDNNSNSNKNKVVTFAKILTP 129
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SDANNGGGFSVPRYCA+++FP LD+ ADPPVQ + D+HG +W FRHIYRGTPRRHLLT
Sbjct: 130 SDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWDFRHIYRGTPRRHLLT 189
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FVN KKL+AGDS+VF+R ++ +G+RRA G+EY
Sbjct: 190 TGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPIS-NHGDEY--------------- 233
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+GG G R G++ E V EAV A G
Sbjct: 234 --YGG--------------------------GKKGFRRIGMGKLTAEAVSEAVNKAVQGY 265
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PFEVVYYP A +F V+A V+ M +W G R KMA ETEDSSR++WF G +SS
Sbjct: 266 PFEVVYYPTAGWSDFVVRAEDVEVFMAGYWSPGTRVKMAMETEDSSRVTWFQGVVSSTFQ 325
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+ W+ LQ+TWDEP++LQN+KRV+PW VE+V+N HL P K+L+
Sbjct: 326 ETGL------WKQLQITWDEPEILQNLKRVNPWQVEVVANSS--HLLAIYPPAKRLKPSS 377
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTS--AGIQGARHAQFG-ISSSDFHVNN- 475
G+ M L+SG P L T+ AG+QGARH +FG +S F N
Sbjct: 378 SASGFLSGEGEM-LYSGRGQQAVDPSPYLFSYTTFPAGMQGARHYEFGSFNSIGFIGENT 436
Query: 476 -KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNL--------EKS 526
+L + F S L P R + T N LS L+ ++ N+ +
Sbjct: 437 PQLCTNNFFSPL----PGLRK---VSTEMVNYGSPLSDDLSPNSNTTNVSSGNELVGNRG 489
Query: 527 ENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSD 566
++ LFGQ I ++ ++ + + K SSD
Sbjct: 490 HAVRVSSIQLFGQIINVQELTESGLAEGLYEEDGSKESSD 529
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 226/601 (37%), Positives = 320/601 (53%), Gaps = 87/601 (14%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E + S+ PQLW+ACAG +PP+ + V+YFPQGHAEH+ + + ++ PP + CRV+
Sbjct: 28 ETKGSVHPQLWYACAGPTCTVPPVGTAVYYFPQGHAEHAGAAAD--ANLHAPPFVPCRVA 85
Query: 63 SLKFLADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
++F+A+ +TDE++ KI+L P+ + E D + + + G + S AKTLT+S
Sbjct: 86 GVRFMAELDTDEIFVKIRLDPLRSGEPLTDVGEAQVVNDEAGQRQPTRPVISSAKTLTKS 145
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D+ +GG SV R CAETIFP+LD + P Q V A+DVHG W FRH+YRGTP R+LLTT
Sbjct: 146 DSYSGGSLSVRRTCAETIFPKLDKSIKRPQQLVSARDVHGVEWTFRHVYRGTPERNLLTT 205
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN KK+V GDS+VFLR +DG + +G+RRA++
Sbjct: 206 GWSDFVNSKKIVIGDSVVFLREEDGTIHIGLRRAERA----------------------- 242
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA-------VA 293
N+YG GN G G + VL A V
Sbjct: 243 ---------------------SRRNAYGRQLVRGNASGTGAAA--DGVLRAEDVVAAAVT 279
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
LAA+G PFEVV+YPRA+ P FCV+ + V A++V W G+RFKMAFE +D SRISWFMGT
Sbjct: 280 LAAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSWCPGLRFKMAFEAKDLSRISWFMGT 339
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI----HLSPFS 409
++ V ADP WP SPWR LQVTWDEP+L++N+ R+SPW VELV+ MP + +
Sbjct: 340 VAGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVELVATMPNLPHFAAPPTPT 399
Query: 410 PARKKLRLPQQLDFPFDG-QFTMPLF----------SGNPLGPSSPLCC----------- 447
P RKK R+P ++ G Q P+F + P+ C
Sbjct: 400 PPRKKPRMPTYKEYQSQGRQLFDPVFPLNNPLPLPHPHHHPAPTHDWNCHGFVHCSSFPF 459
Query: 448 ---LSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHT 504
++ +AGIQGARHA F H+ + L+ L L ++++ P
Sbjct: 460 PDSIAPAAAAGIQGARHANFAQFLFSDHLLSNLRRSLVLGGIRQY-PGDHHAAPAPRIPI 518
Query: 505 NSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSS 564
+ + + T + + +K + +K LFGQ I TE+Q+ S + G+S
Sbjct: 519 PTDDVKTGSETPRSPSHATKKRDGVKPPGIRLFGQEILTEEQMKGSHDGKATNNTSGRSG 578
Query: 565 S 565
+
Sbjct: 579 A 579
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 346 bits (888), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 221/560 (39%), Positives = 294/560 (52%), Gaps = 62/560 (11%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+DP LW A +G+ I + S V+YF QGH E + S P+ C VS+ +
Sbjct: 2 MDPNLWRAFSGNSAHIHTVGSEVYYFVQGHLEQATYVPTLSRSVLSNPITKCIVSAADYT 61
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
AD +DEV K+ L PIP + + + + + + + FAK LT SDANNGGG
Sbjct: 62 ADPLSDEVCLKLNLNPIPPGQSVSQVVHPFSSCDDGNGQRNRIEKFAKVLTSSDANNGGG 121
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPR+CA++IFP L+Y +PPVQT+ DVHG +W FRHIYRGTPRRHLLTTGWS FVN
Sbjct: 122 FSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTGWSKFVN 181
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
KKL+AGD+++F R D+ VGIRR+ K GGG+ S WNS G GG C
Sbjct: 182 NKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGD---CSKWNSQVG--------GGGRC 230
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYP 307
+ E+ R+G+ + + + TR N G+V E V A LAA KPFEVVYYP
Sbjct: 231 NVEEK-----RSGDRSTDVF--------TRTNIGKVPAETVATAAELAAEFKPFEVVYYP 277
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R T EF + A V ++ W G+R KM ETEDS + W+ GT++S V W
Sbjct: 278 RIGTSEFVIPAEKVNNSLNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKG 337
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ---LDFP 424
SPWR+L+VTW+E D LQ+ K VSPW VEL S P I S KK R+PQ+ ++
Sbjct: 338 SPWRMLEVTWEETDALQSAKFVSPWEVELASPSPPIPPPLHS--AKKYRIPQKSGMVNAE 395
Query: 425 FDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR------------HAQFGISSSDFH 472
D M F + +G + ++ AG+QGAR H + +SD +
Sbjct: 396 ADLFSPMMRFGDSTMGQFNRSLMNFNSFPAGMQGARQIFFRESGSSNPHNEISPPTSDEN 455
Query: 473 VNNKLQSG---------LFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNL 523
KL + L + S+Q T + +L+ T ++EN SC T N
Sbjct: 456 SMLKLNTAPNTQTVSTDLHIGSVQSDTLSPDSQASVLSFATGTAENQSCNSTKAGVN--- 512
Query: 524 EKSENIKKHQFLLFGQPIRT 543
F LFGQ I T
Sbjct: 513 ---------SFQLFGQIIYT 523
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 209/466 (44%), Positives = 266/466 (57%), Gaps = 32/466 (6%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEH-SLGSVNFPSSSRIPPLIFCRVSSLKF 66
+DP LW CAG+ V+IP L+S V+YFPQGH + S N P + CRV S++F
Sbjct: 16 LDPALWLVCAGTTVEIPTLHSRVYYFPQGHFDQASSAPRNLSPLLLSKPAVLCRVESVQF 75
Query: 67 LADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK-PASFAKTLTQSDANNG 125
LAD TDEV+AK+ L P+ + S E SF+K LT SDANNG
Sbjct: 76 LADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVSFSKVLTASDANNG 135
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR+CA++IFP L++ ADPPVQ ++ DVHG +W+FRHIYRGTPRRHLLTTGWSTF
Sbjct: 136 GGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTGWSTF 195
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK-GIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
VN KKLVAGD +VF++ G L VGIRRA + +G G + GG
Sbjct: 196 VNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDR------------------GG 237
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+R +E + S R G++ ++V EA LAA PFEVV
Sbjct: 238 MR--IRVDEEEEEEEEEEEEEEVREVFS----RDGRGKLSAKVVAEAAELAARNMPFEVV 291
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YYP+ EF VK AV AM+V W G+R K+A ET+DSSR+SW GT+SSV +
Sbjct: 292 YYPKERWSEFVVKTEAVNEAMKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQ 351
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
W S WR+LQVTWDEP+ LQ K VSPW VELVS P +H S F P K+++
Sbjct: 352 WRGSLWRMLQVTWDEPEGLQIAKWVSPWQVELVSTTPALH-SAFPPI-KRIKAAHDSGVF 409
Query: 425 FDGQ---FTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
+G+ F M F+ + +G + AG+QGARH F S
Sbjct: 410 TNGERDPFPMTGFTNSTMGQLNQALLSYGTFPAGMQGARHDAFSAS 455
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 213/523 (40%), Positives = 285/523 (54%), Gaps = 96/523 (18%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
++ +DP +W A AG+ V+IPP+ + V+YFPQGHAEH+ + S +P I CRV S+
Sbjct: 8 DREVDPIVWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTSPAVMSPGMPAFILCRVLSV 67
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+FLA+S+TDEVYA+I L PI +E+D + + ++ SF K LT SDANN
Sbjct: 68 RFLAESDTDEVYARIFLHPISQSEVD------EVTMREEEVVEDEIVSFVKILTPSDANN 121
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CA++I+PRLD+ A+PPVQ + +D+ G W+FRHIYRGTPRRHLLTTGWS
Sbjct: 122 GGGFSVPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLTTGWSK 181
Query: 185 FVNQKKLVAGDSIVFL-RAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FVN K+LVAGDS VF+ R + L VG+RRA + S W S
Sbjct: 182 FVNSKQLVAGDSAVFMRRTANNQLYVGVRRAIR-----RNDDSQKWTS------------ 224
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
S +RE ++N+ GS + S R GR+ E V AA G PFEV
Sbjct: 225 --SFLMRE-----------HINNGGSPDVSWGIR--KGRMTMEAVAAVAEKAARGVPFEV 269
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
YPR + F VKA V+ A+ + W GMR KMA E EDSSR + + GT+SSV + +
Sbjct: 270 SCYPRDAWAGFVVKAQEVQMALNMPWTVGMRVKMAVEAEDSSRTACYQGTVSSVILNESG 329
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL-- 421
W SPWR+LQ+TW+EP++ Q+ RV+PW VE +P F P KK++LP L
Sbjct: 330 PWRGSPWRMLQITWEEPEVPQHANRVNPWQVECFPPIPQ-----FLPPSKKIKLPNGLLP 384
Query: 422 -----------------------------DFPFDGQFTMPL-----FSGNPLGPSSPLCC 447
+FP G + P+ F LG S P+
Sbjct: 385 DGERSPFPMTGLGSFPMTGLGNFPMTGLGNFPMTGLGSFPMTGLGSFHMTGLG-SFPMTG 443
Query: 448 LSDNT--------------SAGIQGARHAQFGISS-SDFHVNN 475
L ++T AG+QGARH Q +SS S+ NN
Sbjct: 444 LGNSTIGLSSPSLGNFTSFPAGMQGARHDQVSVSSLSNVKSNN 486
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 339 bits (870), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 237/597 (39%), Positives = 304/597 (50%), Gaps = 100/597 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIF------C 59
+ +DP +W ACAG V IP ++S V+YFPQGH E + S + PL+F C
Sbjct: 10 RPLDPSIWRACAGKSVHIPAVHSRVYYFPQGHVEQA------SSPPVLSPLVFSKPSVLC 63
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA------SF 113
RV ++ FLAD +TDEV+AKI+L P+ + +E + VG + ++ SF
Sbjct: 64 RVVAVWFLADQDTDEVFAKIRLEPVGRS---WESGTMERRRVGDGDDDKEDEGEDKVMSF 120
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SDANNGGGFSVPR+CA+ IFP L++ ADPPVQ ++ D+ G W FRHIYRGTP
Sbjct: 121 VKILTSSDANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTP 180
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFL-RAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
RRHLLTTGWS FVN KKLVAGDS+VF+ R + +L +G+RR + WN N
Sbjct: 181 RRHLLTTGWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDAR------------WNRN 228
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+ A G + GS G +R + GRV+ E V A
Sbjct: 229 G----------------ERWSFRSALAGAVKAKEVGSIE--GFSRSSSGRVRAEEVAVAA 270
Query: 293 ALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
LAA G PFEVVYYPR + +F VKA V+ A+ V W GMR KMA ETEDSS+ S F G
Sbjct: 271 ELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQG 330
Query: 353 TISSVQVADPISWPNSPWRLLQ-----------------------------VTWDEPDLL 383
T+SS V D W S WR+LQ VTWDEP++L
Sbjct: 331 TVSSATVMDNGPWRGSLWRMLQTWSYLQDTKMRSLIVTFFSGLLVLDLYVKVTWDEPEVL 390
Query: 384 QNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDGQ----FTMPLFSGNPL 439
QNV RVSPW VELV MP P K+ R+ Q + P DG+ F M L
Sbjct: 391 QNVMRVSPWQVELV--MPTPPFHTTPPPAKRFRIAQSPELPSDGEGEIFFPMADTVMGIL 448
Query: 440 GPSSPLCCLSDNT-SAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDG 498
PS L+ NT AG+QGAR F +SS + ++SL
Sbjct: 449 NPS----LLNHNTFPAGMQGARQDSFYVSSLSNLTSENTHQMCTINSLDDMATKLNTVST 504
Query: 499 ILTSHTNSSENLS--------CLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQI 547
L ++ S+NLS T NQ+ S + H F LFG+ I +Q +
Sbjct: 505 ELNIGSSLSDNLSPDSQGSVHFFGTKPVGNQDGNSSTKVGIHSFQLFGKVIHIKQPV 561
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 339 bits (869), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 226/527 (42%), Positives = 295/527 (55%), Gaps = 81/527 (15%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+DP++W ACAG+ VQIP L+S V+YFPQGH EH+ S R P + C VSSL FL
Sbjct: 9 VDPKIWRACAGAAVQIPKLHSRVYYFPQGHMEHASPSHYLSPLIRSLPFVPCHVSSLDFL 68
Query: 68 ADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDANN 124
AD +DEV+AK L P+ + + F+++ + D + E SFAK LT SDANN
Sbjct: 69 ADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVSFAKILTPSDANN 128
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGGFSVPR+CA++ FP LD+ ADPPVQ + D+HG W+FRHIYRGTPRRHL TTGWS
Sbjct: 129 GGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRRHLFTTGWSK 188
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN KKLVAGD++VF++ DG + VGIRRA + P +
Sbjct: 189 FVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPA----------------- 231
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
E E G +R GRV E V A AA PFEVV
Sbjct: 232 ------ERE--------------------GFSRSTTGRVTAEAVAAAAESAARNAPFEVV 265
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YYPR +F V A V+ +M+ W+ GMR K++ ETEDSSR++W+ GT+SS ++
Sbjct: 266 YYPRTGFADFVVSAEVVEESMKCAWVGGMRVKISMETEDSSRMTWYQGTVSSACASE--- 322
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR-------L 417
N PWR+LQV WDEP++LQN K+VSPW VELVS +H + FSP K+LR L
Sbjct: 323 --NGPWRMLQVNWDEPEVLQNAKQVSPWQVELVSPPFALH-TVFSP-NKRLRADQGSGLL 378
Query: 418 PQQLDFPFDGQFTMPLFSGNPLG-----PSS-------PLCCLSDNTSAGIQGARHAQFG 465
+ PF F MP FS + +G P+S PL ++ AG+QGARH +
Sbjct: 379 SNREQDPF---FPMPGFSNSAMGHMTGFPNSTVGQMDKPLLSY-ESFPAGMQGARHDLYS 434
Query: 466 -ISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLS 511
+S S+F +N S L++ S F N G +T+ N S + S
Sbjct: 435 PLSFSNFLNDN---SYLYMGS-GSFGNNPVQSLGTVTTELNMSSSQS 477
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 198/460 (43%), Positives = 266/460 (57%), Gaps = 46/460 (10%)
Query: 21 VQIPPLNSTVFYFPQGHAEHSLGSVN-FPSSSRIPPLIFCRVSSLKFLADSETDEVYAKI 79
VQIP L+S V+YFPQGH EH ++ PSS+ P C ++S++ LAD TDEV+A +
Sbjct: 26 VQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSPVP---CIITSIQLLADPVTDEVFAHL 82
Query: 80 KLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIF 139
L P+ + + + G ++ K +FAK LT SDANNGGGFSVPR+CA+++F
Sbjct: 83 ILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTTFAKILTPSDANNGGGFSVPRFCADSVF 142
Query: 140 PRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF 199
P L++ DPPVQ + D+HG +W FRHIYRGTPRRHLLTTGWS FVN KKL+AGDS+VF
Sbjct: 143 PLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKLIAGDSVVF 202
Query: 200 LRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARN 259
+R ++ +G+RR G G N + S +E++ +
Sbjct: 203 MRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNG--------YYSQSSVAKEDDGSPKK- 253
Query: 260 GNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKAS 319
+F SGN G++ E V +A+ A+ G PFEVV+YP A EF V+A
Sbjct: 254 ---------TFRRSGN-----GKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAE 299
Query: 320 AVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV-QVADPISWPNSPWRLLQV--- 375
V+++M ++W G R KMA ETEDSSRI+WF G +SS Q P W SPW+ LQV
Sbjct: 300 DVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP--WRGSPWKQLQVYDV 357
Query: 376 ----TWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF---DGQ 428
TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ DG+
Sbjct: 358 FEMITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGE 415
Query: 429 FTMP---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
P L S PS + S AG+QGAR FG
Sbjct: 416 ILYPQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 454
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 332 bits (851), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/405 (44%), Positives = 232/405 (57%), Gaps = 98/405 (24%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
+ + PQLW ACAGSM +PP+ + +YFPQGHAE + +V+ +PP + CRV++++
Sbjct: 30 RDVHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAAVDL---RVVPPFVACRVAAVR 86
Query: 66 FLADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPA-------SFAKT 116
+A+ +TD++YAKI+LVP+ E D D L S G D + ++ SFAKT
Sbjct: 87 LMAEPDTDDIYAKIRLVPLRPWEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRPLSFAKT 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LTQSD W FRH+YRG P RH
Sbjct: 147 LTQSD-----------------------------------------WTFRHVYRGNPPRH 165
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
L+T GWS FV+ KKL+ GDS+VF+R +DG + +G+RRAK+ GGN +G+
Sbjct: 166 LITAGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNA-------GRSGAA 218
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
V G + G+V E V+EA LAA
Sbjct: 219 VAGP--------------------------------------SDGKVPAEDVVEAARLAA 240
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G+PFEVV+YPRAS PEFCV+A AVK +MR W G+RFKMAFETED SRISWFMGTI+
Sbjct: 241 AGQPFEVVHYPRASAPEFCVRADAVKESMRSPWCPGLRFKMAFETEDLSRISWFMGTIAG 300
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP 401
V+ ADP WP SPWRLLQVTWDEP+LLQNVKRV PW VELVS+MP
Sbjct: 301 VEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVELVSSMP 345
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 219/585 (37%), Positives = 303/585 (51%), Gaps = 91/585 (15%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP---PLIFCRVS 62
+ + ++W CAG V +P + S V+YFP GH EH+ S N + + I P C ++
Sbjct: 7 RRVKSKIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVIDGYGPSFPCIIT 66
Query: 63 SLKFLADSETDEVYAKIKLVPIPANE-----IDFEDNNLSLNSVGSDSESEKPASFAKTL 117
++ LAD TDEV+AK+ L P+ + +D ED+ G D K SF KTL
Sbjct: 67 AVDLLADPHTDEVFAKLLLSPVTEGQEFPEVVDEEDD-------GGD----KFVSFVKTL 115
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T+SD+NNGGGFSVPR CA+ IFP+LD + P Q + DVH +WKF H+YRG P+RHL
Sbjct: 116 TKSDSNNGGGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHL 175
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
TTGW+ FVN KKLVAGDSIVF++ GD+ VGIRR K + NN
Sbjct: 176 FTTGWTPFVNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKA------VNN---- 225
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
++EE K NG + + G S G R G + + V+EAV LA
Sbjct: 226 ------------KKEEGK--ENG-LEVKREGF--SRGGRR---GMLTEKAVIEAVELAEK 265
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWF--MGT 353
FEV+YYPRA+ F V A+ V AM++ W GMR K+ + ++S S++++F GT
Sbjct: 266 NLAFEVIYYPRANWCNFVVDANVVDDAMKIGWASGMRVKLPLKIDESSNSKMTFFQPQGT 325
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
IS+V S PN WR+LQV WDE ++LQN RV+PW VEL+S+ P +HL PF + K
Sbjct: 326 ISNVS-----SVPN--WRMLQVNWDELEILQNQNRVNPWQVELISHTPAVHL-PFL-STK 376
Query: 414 KLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTS--------AGIQGARHAQFG 465
K RL Q D + G+P P S N + AG+QGARH
Sbjct: 377 KPRLVQDSALFCDDK-------GDPFIPMIEFPKRSLNQTLLNCGYFPAGMQGARHDHLS 429
Query: 466 ISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEK 525
+S +N+ S F+++L P + D N+ E + + NSN
Sbjct: 430 LSGFSNSLNDNSYS-FFVNNLNIDMPTTNDLSPNNLDSLNTFE--TDFVETHNSNIKGVG 486
Query: 526 SENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
S +IK LFG+ I+ + H S G+ SS G ++
Sbjct: 487 SGSIK-----LFGKIIKPVESDVHD------SGTKGEDSSKGSNE 520
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 202/578 (34%), Positives = 281/578 (48%), Gaps = 110/578 (19%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS---RIPPLI 57
M ++ +D ++W CAGS V+IP L S V+YFP GH EH S N + S R P I
Sbjct: 1 MSSQQRRVDQKIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPNPNTLSHLDRSRPFI 60
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
C VS++ LAD TDEV+ K+ L P+ N+ E ++L + D + K S++KTL
Sbjct: 61 LCTVSAVDLLADLCTDEVFVKLLLTPV-TNKGVHEPHSLEVREDKDDDK--KVVSYSKTL 117
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SDANNGG FSVP CA+ IFP LD + P Q + D+HG++WKFRH+YRGTP RHL
Sbjct: 118 TPSDANNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHL 177
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTT WS FV++K+LV GDS++F++ DG++ VG+RR K
Sbjct: 178 LTTDWSEFVDKKRLVGGDSLIFMKDSDGNISVGVRRQTK--------------------- 216
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
FGG ++ + EAV LA
Sbjct: 217 ----FGG-----------------------------------AAKITEKSFTEAVELADK 237
Query: 298 GKPFEVVYYPRAST-PEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS-RISWFMGTIS 355
FEVVYYP A F V A V+ AM + W G+R +++ + DSS R S F GTIS
Sbjct: 238 NLAFEVVYYPTAKGWCNFVVDAKVVEDAMNISWSLGVRIELSSKNYDSSKRCSKFEGTIS 297
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK-K 414
+ +S PN PWR+L+V WDEP + Q +RVSPW VE +S++ +H F P +K K
Sbjct: 298 A------LSAPNCPWRMLEVKWDEPKVSQVPERVSPWEVETISDIFALH-PQFHPTKKLK 350
Query: 415 LRLPQQLDF-------------PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARH 461
P F F F + S+ +D +QGARH
Sbjct: 351 KSDPDSAAFSDKKGDSFIPNIEAFLKMVPNIEFKHFVMTSSNQTLLNNDAFLDSMQGARH 410
Query: 462 AQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLT-----M 516
F S+S N+K S FL + NS ++S N++ +S L+ +
Sbjct: 411 GLFSTSTSSNFGNDK--SNGFLGN------NSMAVSSNVSSEPNTAAPISLDLSPHSHDI 462
Query: 517 GNSNQNL-----EKSENIKKHQFLLFG---QPIRTEQQ 546
NS +E + F+LFG +P+R++ Q
Sbjct: 463 SNSRGTKFAGTDSSTEKVSPGSFMLFGKIIKPVRSDFQ 500
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 226/427 (52%), Gaps = 66/427 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K I+ +LWHACAG +V +PP+ S V YFPQGH+E S++ PS +P + C
Sbjct: 18 KKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTIPSYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
++ SL ADSETDEVYA++ L P+ ++ + + + +G + F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYAQMTLQPV----NKYDRDAMLASELGLKQNKQPTEFFCKTLTA 133
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD+T PP Q ++AKD+H WKFRHIYRG P+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ K+L+AGDS++F+R + L +GIRRA + P +S+ SC +
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASR--------PQPALSSSVLSCDS- 244
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
G + ++ + NSS
Sbjct: 245 -----------------MHIGILAAAAHAAANSS-------------------------- 261
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + A+ GMRF+M FETEDS + +MGTI+ +
Sbjct: 262 PFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSG-VRRYMGTITGIGD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQV WDE + RVS W +E V+ I PF + +LP+
Sbjct: 321 LDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFF----RPKLPK 376
Query: 420 QLDFPFD 426
Q P D
Sbjct: 377 QPGMPDD 383
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ YE+L LA MFGI+ R+D ++Y D I GD+P+
Sbjct: 849 VGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDW--KLVYVDHENDILLVGDDPWE 906
Query: 677 DFMKSAKRLTIL 688
+F+ K + IL
Sbjct: 907 EFVSCVKSIKIL 918
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/422 (37%), Positives = 224/422 (53%), Gaps = 63/422 (14%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG M+ +P S V YFPQGH E L P+S+ IP +FCRV +K A+
Sbjct: 33 ELWHACAGPMISLPKKGSVVVYFPQGHLEQHLHDFPLPASANIPSHVFCRVLDVKLHAEE 92
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK------PASFAKTLTQSDANN 124
+DEVY ++ LVP + ++ + ++ G + ++E P F KTLT SD +
Sbjct: 93 GSDEVYCQVVLVP-ESEQVQQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTLTASDTST 151
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDY+ P Q +VAKD+HG+ W+FRHIYRG PRRHLLTTGWS
Sbjct: 152 HGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTGWSA 211
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR +DG+L +GIRRA +
Sbjct: 212 FVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQ---------------------------- 243
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
L S +F++ +G+ P +++ V ++ F +
Sbjct: 244 -------------------LKSGSTFSALSGQQGS-----PTSLMDVVNALSARCAFSIH 279
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S+ EF + ++ + GMRF+M FETED++ F G I + DP+
Sbjct: 280 YNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETEDAAE-RRFTGLIVGIADVDPVR 338
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPARKKLRLPQ-QLD 422
WP S WR L V WD+ + ++ RVSPW +E + +L R K+ LP +LD
Sbjct: 339 WPGSRWRCLMVRWDDLEATRH-NRVSPWEIEPSGSASTANNLMSAGLKRTKIGLPSAKLD 397
Query: 423 FP 424
FP
Sbjct: 398 FP 399
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/425 (37%), Positives = 220/425 (51%), Gaps = 69/425 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG ++ +P S V YFPQGH E L P+S+ IP +FCRV +K A+
Sbjct: 28 ELWHACAGPLISLPKKGSVVVYFPQGHLEQHLHDFPLPASANIPSHVFCRVLDVKLHAEE 87
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK---------PASFAKTLTQSD 121
+DEV+ ++ LVP E + L +D E E P F KTLT SD
Sbjct: 88 GSDEVHCQVVLVP----ETEQVHQKLREGEFDADGEEEDAEAVMKSTTPHMFCKTLTASD 143
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG+ W+FRHIYRG PRRHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRHLLTTG 203
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FVN+KKLV+GD+++FLR +DG+L +GIRRA + +G+
Sbjct: 204 WSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQ-------------------LKSGST 244
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
F S G ++ P +++ V ++ F
Sbjct: 245 FSALS---------------------------------GQQLSPTSLMDVVNALSARCAF 271
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+ Y PR ST EF + ++ + GMRF+M FETED++ F G I + D
Sbjct: 272 SIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRFETEDAAE-RRFTGLIVGIADVD 330
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPARKKLRLPQ- 419
P+ WP S WR L V WD+ ++ ++ RVSPW +E + +L R K+ LP
Sbjct: 331 PVRWPGSKWRCLMVRWDDLEVTRH-NRVSPWEIEPSGSASTANNLMSAGLKRTKIGLPSA 389
Query: 420 QLDFP 424
+L+FP
Sbjct: 390 KLEFP 394
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/706 (31%), Positives = 332/706 (47%), Gaps = 132/706 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSS---SRIPPLIFCRVSSLKFL 67
+LWHACAG + Q+PP++S V Y+PQGH E + + +S S +P + CR+S ++
Sbjct: 7 ELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAADVYQASKQFSNLPAHLLCRISKIELQ 66
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
AD +TDEV+A++ L P E+ E + S + SF KTLT SD + GG
Sbjct: 67 ADPQTDEVFAQMDLTP--QYELSKETKD-----APSPIQQSNVRSFCKTLTASDTSTHGG 119
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPR AE P LD+ PP Q +VAKD+HG+ W FRHIYRG PRRHLLTTGWS FV+
Sbjct: 120 FSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLTTGWSVFVS 179
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
QK+LVAGD+++FLR ++G L VG+RRA K
Sbjct: 180 QKRLVAGDTVIFLRGENGQLRVGVRRASK------------------------------- 208
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK-PFEVVYY 306
+ AR+ + F+S+ G VL A + AA+ + F V+Y
Sbjct: 209 -----QQPQARSTH--------FSSANLHLG---------VLAAASHAATERLRFSVIYN 246
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
PR S EF + + + G RFKM FETE+S+ + GTI + DP+ WP
Sbjct: 247 PRTSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERR-YSGTIVEISDVDPLKWP 305
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD---- 422
+S WR ++V WDE + +RVSPW +E + + + P P K R P D
Sbjct: 306 SSAWRSMKVEWDE-SASERHERVSPWEIEPLVPISTLPTPPVGPRPK--RRPPTFDSSVS 362
Query: 423 ---FPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
+ G + S N + PS S N ++ AR +Q I+S +NN +
Sbjct: 363 WASYMGTGAYQFRDPSCNKILPSWLTNSKSANLTSPPVPAR-SQLPITS----LNNDPK- 416
Query: 480 GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQ 539
+L +H NLS L + L S +++ Q LFG
Sbjct: 417 -------------------VLHAH-----NLSFELWETVEQEQLNASPALEQ-QCKLFG- 450
Query: 540 PIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE--F 597
+ +D VV + + S + S+GSG + S+ +
Sbjct: 451 ---------FNLADKVVPTPVSSAPS------LCEDSEGSGPWSSSDHTSSTSADTRVGM 495
Query: 598 FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-RSDMLS 656
++Q + + +G KV+ S VGRT+DL SY L R LA +FG+E + D ++
Sbjct: 496 IVTGTYQPLVAPVRSG-TKVYY-SGKVGRTIDLKKCESYAALRRMLASLFGLEGQLDDVT 553
Query: 657 ---HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRT 699
++Y D + GD+P+ +F + L +L S D+ G++
Sbjct: 554 KGWQLVYTDHENDVLLVGDDPWEEFCNCVRSLKVL--SPQDAAGQS 597
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 176/469 (37%), Positives = 238/469 (50%), Gaps = 77/469 (16%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D +W ACA + ++P + + V+YFP GHAE + P+ P L C V++L
Sbjct: 14 VDRDVWLACAVPLSRLPTVGAEVYYFPHGHAEQC--PAHLPAPIPAPHLFPCIVTNLTLG 71
Query: 68 ADSETDEVYAKIKLVPIP------ANEIDFEDNNLSLNSVGSDS----ESEKPASFAKTL 117
AD +T+EV+AKI L P P A+ + D + SDS + ++ + F K L
Sbjct: 72 ADDKTNEVFAKISLSPGPHHAPAAASSLVGPDPTTTTKESESDSPPHPQPQELSYFTKEL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
TQSDANNGGGFSVPRYCA+ IFP LD+ ADPPVQ +V +D G W+FRHIYRGTPRRHL
Sbjct: 132 TQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRGTPRRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FVN K LVAGD +VF+R +GDL VG+RR + YP
Sbjct: 192 LTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRTPR-------YPLV---------- 234
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F G + N N N + R RV P+ V+EA LAA
Sbjct: 235 ----FPG-------------ADANANANQ----DQQPPPRNARARVPPQDVMEAARLAAE 273
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKM-AFETEDSSRISWFMGTISS 356
G+PF V Y+PR + EF V V+ A+ W G +M E ED+ R W G + +
Sbjct: 274 GRPFTVTYFPRQAAGEFVVPRDEVERALATRWEPGTEVRMQVMEAEDTRRTVWADGHVKA 333
Query: 357 VQVADPISWPNSPWRLLQVTWDE--PDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + WR L++ WD+ P L+ + V+ W V+LV+ + P
Sbjct: 334 LH--------QNIWRALEIDWDDSSPLSLKLSRFVNAWQVQLVA---------YPPLPNT 376
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCC--LSDNTSAGIQGARH 461
+R+ + G + PL +GP S L AG+QGARH
Sbjct: 377 VRICDPIAPLCPGDVSYPL-----IGPESQAMAMILGSPIPAGMQGARH 420
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 230/696 (33%), Positives = 320/696 (45%), Gaps = 113/696 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P P I C+V +++
Sbjct: 20 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPPKILCKVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SFAKTLTQS 120
A++++DEVYA+I L P + E N D+E +P SF KTLT S
Sbjct: 80 LRAETDSDEVYAQIMLQP------EAEQNE----PTSPDAEPPEPERCNVHSFCKTLTAS 129
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R AE P+LD T +PP Q +VAKD+HG W FRHI+RG PRRHLLTT
Sbjct: 130 DTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTT 189
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 190 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH-------- 238
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+M+L ++ A ++G
Sbjct: 239 --------------------SMHLG---------------------VLATASHAISTGTL 257
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI---SSV 357
F V Y PR S EF V + A GMRFKM FE ++S F GTI S+
Sbjct: 258 FSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERR-FSGTIIGLGSM 316
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPAR-KKL 415
W NS WR L+V WDEP + RVSPW +E L + P P P R K+
Sbjct: 317 PANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDATNP---QPPQPPLRNKRA 373
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
R P P P+F G P+ P S +G+Q + +S F ++
Sbjct: 374 RPPAS---PSIAPELPPVF-GFWKSPAEPAQAFS---FSGLQRTQELYHSNPNSIF--SS 424
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
L G F S +R TPN+ T +E+ S + + EK +
Sbjct: 425 SLNVG-FNSKNERSTPNNNHL--YWTMRETRTESYSASINKAPT----EKKQESATSGCR 477
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
LFG +I + S V +G+ S V+ S S +H + +SS
Sbjct: 478 LFG------IEIGSAVSPVVTVASVGQDPPPALSVDVE-SDQLSQPSHANKTDAPAASS- 529
Query: 596 EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERSD 653
RS TES KV ++ VGR +DL+ L Y++L+R+L MF I E S
Sbjct: 530 ----ERSPNETESRQVRSCTKVIMQGMAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSA 585
Query: 654 MLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L V+Y D + GD+P+++F + KR+ I
Sbjct: 586 NLRKWKVVYTDDEDDMMLVGDDPWNEFCRMVKRIYI 621
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 272/559 (48%), Gaps = 116/559 (20%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D +W ACA + ++P + + V+YFP GH+E ++ P P L C V+++
Sbjct: 11 VDRDVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAPLPH--PHLFPCTVAAVALS 68
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDANNG 125
AD TDE +A I LVP P + G+ + PA +AK LTQSDANNG
Sbjct: 69 ADPSTDEPFATISLVPGPHRAL----------GGGAPHHAVDPAFAHYAKQLTQSDANNG 118
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR+CA+++FP LD+ ADPPVQT+ +D+ G++W+FRHIYRGTPRRHLLTTGWS F
Sbjct: 119 GGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLLTTGWSRF 178
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
VN K LVAGD++VF+R DG+L G+RR + YP S
Sbjct: 179 VNAKLLVAGDAVVFMRRPDGELLAGVRRTPR-------YPVS------------------ 213
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
++ + RN RV + V +A AA G PF V Y
Sbjct: 214 -----QDPAEPPRNAR-------------------ARVPAQEVEDAARRAAQGAPFTVTY 249
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
YPR EF V V+ A+ W G + +M F + R W G + +V
Sbjct: 250 YPRQGAGEFVVPRKEVEDALISPWEPGTQVRMQFLHPEDRRSEWINGVVRAVD------- 302
Query: 366 PNSPWRLLQVTWDE--PDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF 423
+S WR+L++ WDE P L+N + V+ W V+LV P++ K+LR+P+ +
Sbjct: 303 -HSIWRMLEIDWDESAPPSLKN-RHVNAWQVQLVGCPPLL---------KRLRIPETIAP 351
Query: 424 PFDGQFTMPLFSGNPL-GPSS---PLCCLSDNTSAGIQGARH---AQFGISSSDFHVNNK 476
G M +PL GP S P+ + AG+QGAR A F SS+
Sbjct: 352 LISGDVAM----ADPLAGPGSLYMPM-LMGSPIPAGMQGARQDFLADFPSSST-----RM 401
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
L + L S P+ G +S + EN G+ Q E+ I+ L
Sbjct: 402 LTTQLLFPSDHPIPPSP----GGGSSEVLNPEN-------GSPPQFPEEIRTIQ-----L 445
Query: 537 FGQPIRTEQQISHSCSDDV 555
FG I + QI++ S++V
Sbjct: 446 FGTTITSAVQITNGSSEEV 464
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/422 (40%), Positives = 218/422 (51%), Gaps = 64/422 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LW ACAG ++ +P + V YFPQGH E + F + IPP +FCRV ++ A+
Sbjct: 33 ELWRACAGPVISLPRKGTIVVYFPQGHLEQAPKFRAF--AHDIPPHLFCRVLNVNLHAEI 90
Query: 71 ETDEVYAKIKLVPIP---ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
TDEVYA++ LVP P A +D + + + P F KTLT SD + GG
Sbjct: 91 ATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEIEELSTATPHMFCKTLTASDTSTHGG 150
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGWS+FVN
Sbjct: 151 FSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSSFVN 210
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
QKKLV+GD+++FLR ++G+L +GIRRA + GG P S S
Sbjct: 211 QKKLVSGDAVLFLRGENGELRLGIRRAARPEGG---VPYSILCSQ--------------- 252
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP-FEVVYY 306
N+NL++ L AV+ A S K F V Y
Sbjct: 253 -------------NLNLSA----------------------LAAVSTAVSTKSMFHVYYN 277
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
PRAS EF + ++ G RFKM +ETED++ G I+ + DP+ WP
Sbjct: 278 PRASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATE-QRPTGLITGIGDIDPVRWP 336
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR--LPQ-QLDF 423
S WR L V WDE +VSPW +E ++ SP +P KK R LP + DF
Sbjct: 337 GSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFS-SPLTPGSKKPRISLPSIKADF 395
Query: 424 PF 425
PF
Sbjct: 396 PF 397
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 153/394 (38%), Positives = 206/394 (52%), Gaps = 70/394 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP-SSSRIPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V Y PQGH E + +FP ++ IP +FCRV +K A+
Sbjct: 49 ELWHACAGPLISLPKKGSVVVYIPQGHFEQAQ---DFPVTAYNIPTHVFCRVLDVKLHAE 105
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE--------SEKPASFAKTLTQSD 121
+DEVY ++ L+P E + + NL +D E S P F KTLT SD
Sbjct: 106 EGSDEVYCQVLLIP----ESEQVEKNLGEGDTDADGEEDTEAMVKSTTPHMFCKTLTASD 161
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 162 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTG 221
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FVN+KKLV+GD+++FLR DG+L +GIRRA +
Sbjct: 222 WSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQ------------------------- 256
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
L S GSF + +G + P +++ +S F
Sbjct: 257 ----------------------LKSVGSFAAP-----SGQHLSPGTLMDVANALSSRCAF 289
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
Y PR S+ EF + + ++ + GMRF+M FETEDS+ F G + + D
Sbjct: 290 SACYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAE-RRFTGLVLGISDVD 348
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P+ WP S WR L V WD+ + ++ RVSPW +E
Sbjct: 349 PVRWPGSKWRCLLVRWDDIEAGRH-NRVSPWEIE 381
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 171/418 (40%), Positives = 213/418 (50%), Gaps = 74/418 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
++W ACAGS++ +P S V YF QGH E + S + +PP +FCRV ++ AD
Sbjct: 29 EVWQACAGSLISLPRKGSVVVYFXQGHLEQAGASCD---GWGLPPQVFCRVINVNLHADQ 85
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD--------SESEKPASFAKTLTQSDA 122
+DEVYA++ L PIP + + L V D S S P F KTLT SD
Sbjct: 86 VSDEVYAQVSLTPIP----EPVEKGLPEEEVREDGEEEFEFVSRSATPHMFCKTLTASDT 141
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGW
Sbjct: 142 STHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQPRRHLLTTGW 201
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FVNQKKLVAGD+++FLR + G+L +GIRRA + GG PS S N ++G+ F
Sbjct: 202 SVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGS--VPSLALLSQN---LSGSTF 256
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP-F 301
AV+ A S K F
Sbjct: 257 A-----------------------------------------------AVSKAVSTKSVF 269
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PRAS EF V + GMRFKM ETED++ G IS V D
Sbjct: 270 HVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDTAERR-CTGLISGVGDID 328
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
P+ WP S WR L V WDE + RVSPW ++L+ ++PV FSP L+ P+
Sbjct: 329 PVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEIDLLGSVPV-----FSPPATGLKRPR 381
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 268 bits (685), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 228/720 (31%), Positives = 319/720 (44%), Gaps = 139/720 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P P I C+V +++
Sbjct: 20 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPPKILCKVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SFAKTLTQS 120
A++++DEVYA+I L P E D + DSE +P SF KTLT S
Sbjct: 80 LRAETDSDEVYAQIMLQP----EADQSE------PTSPDSEPPEPERCNVYSFCKTLTAS 129
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R AE P+LD T +PP Q ++AKD+HG W FRHI+RG PRRHLLTT
Sbjct: 130 DTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTT 189
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 190 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH-------- 238
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
NM+L ++ A ++G
Sbjct: 239 --------------------NMHLG---------------------VLATASHAISTGTL 257
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQ 358
F V Y PR S EF V + A GMRFKM FE ++S R+S + + S+
Sbjct: 258 FSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGTIIGLGSMP 317
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA----RKK 414
W NS WR L+V WDEP + RVSPW +E P+ +P P K+
Sbjct: 318 ANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELE-----PLDATNPQPPQPHLRNKR 372
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVN 474
R P L + +P G P+ P S + Q H+ S
Sbjct: 373 ARPPALLSIAPE----LPQVFGFLKSPAEPAQAFSFSRPQQTQELYHSNPSSIFS----- 423
Query: 475 NKLQSGLFLSSLQRFTP-NSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQ 533
+ L G F S R TP NS + T +E+ S + + EK +
Sbjct: 424 SSLNVG-FSSKNDRSTPINSHLY---WTMRQTRTESYSASINKAPT----EKKQESATSG 475
Query: 534 FLLFG-------QPIRTEQQISH----SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGST 582
LFG P+ T + + S DV S L + S+ +D ASS+
Sbjct: 476 CRLFGIEIGSAVSPVATVASVGQDQPPALSVDVESDQLSQPSNANKTDAPVASSE----- 530
Query: 583 HEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRR 642
RS +ES KV ++ VGR +DL+ L Y +L+R+
Sbjct: 531 ------------------RSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYADLHRK 572
Query: 643 LAIMFGI--ERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
L MF I E S L V+Y D GD+P+++F++ KR+ I + S+ R
Sbjct: 573 LEEMFDIQGELSANLKKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAKSLTR 632
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 158/418 (37%), Positives = 219/418 (52%), Gaps = 71/418 (16%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSS---SRIPPLIFCRVSSL 64
+D +LWHACAG + Q+PP++S V Y+PQGH E + + +S S +P + C++S +
Sbjct: 4 LDCELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAADVYQASKQFSNLPAHLLCKISKI 63
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ AD TDEV+A++ L P E E + + + SF KTLT SD +
Sbjct: 64 ELQADPHTDEVFAQMDLTPQYETEFTKE-----MKDAPPPTMQKNVRSFCKTLTASDTST 118
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE P LD++ +PP Q +VAKD+HG+ W FRHIYRG PRRHLLTTGWS
Sbjct: 119 HGGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLLTTGWSV 178
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+QK+LVAGD+++FLR ++G L VG+RRA K
Sbjct: 179 FVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQ--------------------------- 211
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK-PFEV 303
L + + N N++L VL A + AA+ + F V
Sbjct: 212 ----LPQTRSTHFSNANLHLG----------------------VLAAASHAATERLRFSV 245
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
+Y PR S EF + + G RFKM FE+++S+ + GTI V ADP+
Sbjct: 246 IYNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERR-YSGTIVEVSDADPL 304
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE---LVSNMPVIHLSPFSPARKKLRLP 418
WPNS WR ++V WDE + +RVSPW +E +S +P + P R K R P
Sbjct: 305 KWPNSAWRSMKVEWDE-SASERHERVSPWEIEPFVPISTLPTPSVGP----RPKRRPP 357
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 163/435 (37%), Positives = 217/435 (49%), Gaps = 66/435 (15%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF-PSSSRIP-----PLIFCRV 61
I +LWHACAG + +P + V YFPQGH E ++ + F P +P P IFCRV
Sbjct: 59 IYKELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRV 118
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEI------DFEDNNLSLNSVGSDSESEKPASFAK 115
++ LA+ E DEVY ++ L+P+P + + ED+ G + F K
Sbjct: 119 EDVQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCK 178
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD GGFSVPR AE FP LDY P Q ++AKD+HG WKFRHIYRG PRR
Sbjct: 179 TLTASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRR 238
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+QK LV+GD+++FLR + G+L +GIRRA + P +G
Sbjct: 239 HLLTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAAR--------PRNG------- 283
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
L E K +G L+S + S+ +T
Sbjct: 284 -------------LPESIIKSQYSGPDVLSSVATALSAKST------------------- 311
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
F V Y PRAS +F V A+ G RFKM F+ +DS + G ++
Sbjct: 312 -----FHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPE-RRYSGVVT 365
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
+ DP WPNS WR L V WDE + + +RVSPW ++ ++P + + SP KKL
Sbjct: 366 GISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLPPLSIQS-SPRLKKL 424
Query: 416 RLPQQLDFPFDGQFT 430
R QQ D F
Sbjct: 425 RTSQQAPSVLDSHFA 439
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV + VGR +DLS L+ Y++L L +F +E D+L +LY D+ +
Sbjct: 687 KVHKQGSLVGRAIDLSRLNGYDDLLVELERLFNME--DLLRDPNKGWRILYTDSENDMMV 744
Query: 670 TGDEPFSDFMKSAKRLTI 687
GD+P+ +F + ++ I
Sbjct: 745 VGDDPWHEFCEVVSKIHI 762
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 219/414 (52%), Gaps = 62/414 (14%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E ++ +LWHACAG +V +P + VFYFPQGH E S N + ++P I C
Sbjct: 7 EDALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILC 66
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ A+S+TDEV+A++ L+P P + +N+ V + + + SF KTLT
Sbjct: 67 RVINVHLKAESDTDEVFAQVTLLPEPKQD----ENSAEKEDVLTPTPRPRVHSFCKTLTA 122
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL
Sbjct: 123 SDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQ 182
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
+GWS FV+ KKLVAGD+ +FLR ++G+L VG+RRA + + G PSS +S+
Sbjct: 183 SGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNG---PSSVISSH------- 232
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+M+L ++ A ++G
Sbjct: 233 ---------------------SMHLG---------------------VLATAWHAVSTGT 250
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PR S EF + A++ H+ GMRFKM FE E++ F GT+ +
Sbjct: 251 IFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPE-QRFTGTVIGTED 309
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
ADP+ WP S WR L+V WDE + + VSPW +E+ P ++ P S +++
Sbjct: 310 ADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPVSRSKR 363
>gi|304308155|gb|ADL70390.1| auxin response factor10 [Arabidopsis thaliana]
Length = 292
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 168/331 (50%), Positives = 205/331 (61%), Gaps = 61/331 (18%)
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+P
Sbjct: 1 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIP 59
Query: 419 QQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG----- 465
Q +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 60 QPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPS 117
Query: 466 ----ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
++ S + NNKL S +FLSS F P + + +S N+SC LTMGN
Sbjct: 118 LLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNPA 171
Query: 521 QNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSD 577
+K + ++K HQF+LFGQPI TEQQ+ + + L + + + A
Sbjct: 172 MVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGLVARG- 224
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
WN S Q GL+TGHCKVF+ESEDVGRTLDLSV+ SY+
Sbjct: 225 -------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSVIGSYQ 261
Query: 638 ELYRRLAIMFGI-ERSDMLSHVLYQDASGAI 667
ELYR+LA MF I ERSD+L+HV+Y+DA+G I
Sbjct: 262 ELYRKLAEMFHIEERSDLLTHVVYRDANGVI 292
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 152/414 (36%), Positives = 219/414 (52%), Gaps = 62/414 (14%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E ++ +LWHACAG +V +P + VFYFPQGH E S N + ++P I C
Sbjct: 7 EDALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILC 66
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ A+S+TDEV+A++ L+P P + +N+ V + + + SF KTLT
Sbjct: 67 RVINVHLKAESDTDEVFAQVTLLPEPKQD----ENSAEKEDVLTPTPRPRVHSFCKTLTA 122
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL
Sbjct: 123 SDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQ 182
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
+GWS FV+ KKLVAGD+ +FLR ++G+L VG+RRA + + G PSS +S+
Sbjct: 183 SGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNG---PSSVISSH------- 232
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+M+L ++ A ++G
Sbjct: 233 ---------------------SMHLG---------------------VLATAWHAVSTGT 250
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PR S EF + A++ H+ GMRFKM FE E++ F GT+ +
Sbjct: 251 IFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPE-QRFTGTVIGTED 309
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
ADP+ WP S WR L+V WDE + + VSPW +E+ P ++ P S +++
Sbjct: 310 ADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPVSRSKR 363
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/399 (38%), Positives = 210/399 (52%), Gaps = 71/399 (17%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-RIPPLIFCRVSSLK 65
S+ +LWHACAG ++ +P S V Y PQGH EH +FP ++ IPP +FCRV +K
Sbjct: 40 SVCLELWHACAGPLISLPKRGSVVVYLPQGHFEHVQ---DFPVNAFDIPPHVFCRVLDVK 96
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK---------PASFAKT 116
A+ +DEVY ++ LVP E + +++L + +D E E P F KT
Sbjct: 97 LHAEEGSDEVYCQVLLVP----ESEQVEHSLREGEIVADGEEEDTGATVKSTTPHMFCKT 152
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRH
Sbjct: 153 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRH 212
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FVN+KKLV+GD+++FLR DG+L +GIRRA +
Sbjct: 213 LLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQ-------------------- 252
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
L GSF +G ++ P +++ V +
Sbjct: 253 ---------------------------LKWAGSFAVP-----SGQQLNPATLMDVVNALS 280
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+ F V Y PR + F + ++ + GMRF+M FETED++ F G I+
Sbjct: 281 TRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRMRFETEDAAD-RRFTGLIAG 339
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR L V WD+ + ++ RVSPW +E
Sbjct: 340 ISDVDPVRWPGSKWRCLLVRWDDIEAARH-NRVSPWEIE 377
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 196/570 (34%), Positives = 265/570 (46%), Gaps = 88/570 (15%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D +W ACA + ++P + + V+YFP GHAE + P+ P L C V+ +
Sbjct: 18 VDRDVWLACAVPLSRLPAVGAEVYYFPHGHAEQC--PAHLPAPLPAPHLFPCTVAGVSLG 75
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
AD ET+EV+AKI L P P SD ++ + F K LTQSDANNGGG
Sbjct: 76 ADDETNEVFAKISLSPGPHRG----PAAACRTDPTSDCPPQELSYFTKELTQSDANNGGG 131
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPRYCA+ IFP LD+ A+PPVQ + +D G W+FRHIYRGTPRRHLLTTGWS FVN
Sbjct: 132 FSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRRHLLTTGWSRFVN 191
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
K LVAGD +VF+R +GDL VG+RR + YP +G+ V
Sbjct: 192 AKLLVAGDIVVFMRRHNGDLIVGLRRTPR-------YPLVFPRVGSGAGV---------- 234
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYP 307
+ + RN RV P+ V+EA LAA G+ F V Y+P
Sbjct: 235 ---DPDQPPPRNAR-------------------ARVPPQDVIEAARLAAEGRSFAVTYFP 272
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKM-AFETEDSSRISWFMGTISSVQVADPISWP 366
R + EF V V+ + W G + +M E ED+ R W G + S+
Sbjct: 273 RQAAGEFIVPRDEVEGVLATRWEPGAQVRMQVMEAEDTRRTVWADGHVKSLH-------- 324
Query: 367 NSPWRLLQVTWDEPDLLQ-NVKR-VSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
+ WR L++ WD+ L N+ R V+ W VELV++ P+ + + R+ +
Sbjct: 325 QNIWRALEIDWDDSSPLSPNLSRFVNAWQVELVTHPPLPNGA---------RICNPIASL 375
Query: 425 FDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQ--FGISSSDFHVNNKLQSGLF 482
G + PL GP P A +QGARH S S + N++ L
Sbjct: 376 CHGDVSYPLIGSEIQGPPIP---------ASMQGARHTGPCAAPSESSAVLTNRVLFPLL 426
Query: 483 LSSLQR--FTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQP 540
LQ FT + D IL + S N S L E +K Q LFG
Sbjct: 427 NPDLQMPPFT-SPSDSSEILDPESASPPNKSVRLPPA------ELPVQVKSIQ--LFGAT 477
Query: 541 IRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
I S +C ++ G S D +D
Sbjct: 478 IMVHVVRSVACG-GCCEELNGAPSGDATAD 506
>gi|298112027|gb|ADB96370.2| auxin response factor 10 [Arabidopsis thaliana]
gi|304308131|gb|ADL70378.1| auxin response factor10 [Arabidopsis thaliana]
gi|304308133|gb|ADL70379.1| auxin response factor10 [Arabidopsis thaliana]
gi|304308135|gb|ADL70380.1| auxin response factor10 [Arabidopsis thaliana]
gi|304308149|gb|ADL70387.1| auxin response factor10 [Arabidopsis thaliana]
gi|304308153|gb|ADL70389.1| auxin response factor10 [Arabidopsis thaliana]
Length = 290
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 168/329 (51%), Positives = 204/329 (62%), Gaps = 61/329 (18%)
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GT+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP
Sbjct: 1 GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP- 59
Query: 412 RKKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ-- 463
RKK+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ
Sbjct: 60 RKKIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQL 117
Query: 464 FG---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCL 513
FG ++ S + NNKL S +FLSS F P + + +S N+SC
Sbjct: 118 FGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCS 171
Query: 514 LTMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
LTMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 LTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEK 225
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
+ A WN S Q GL+TGHCKVF+ESEDVGRTLDL
Sbjct: 226 GLVARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDL 261
Query: 631 SVLSSYEELYRRLAIMFGI-ERSDMLSHV 658
SV+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 SVIGSYQELYRKLAEMFHIEERSDLLTHV 290
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/424 (38%), Positives = 215/424 (50%), Gaps = 79/424 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----------IPPLIFCR 60
+LWHACAG ++ +P TV YFPQGH E L + ++ S +PP IFCR
Sbjct: 50 ELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTYDLPPQIFCR 109
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK-------PASF 113
V +K AD E D+VYA++ L+P + E N + ++ D ES P F
Sbjct: 110 VLDVKLHADQENDDVYAQVTLLP------ELESNEVCGKNLEEDEESGSEILCKTIPHMF 163
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG P
Sbjct: 164 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQP 223
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
RRHLLTTGWS FVNQK LV+GD+++FLR +DG+L + GI + PSS
Sbjct: 224 RRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGEL-------RLGIRRASRPPSS------ 270
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
P+ S + ++L+ +L A
Sbjct: 271 ------IPYSVLS------------SQGLHLS----------------------ILSPAA 290
Query: 294 LAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
A S K F V Y PRAS EF + ++ GMRFKM E EDS+ G
Sbjct: 291 NALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKR-CTG 349
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
I+ DP+ WPNS WR L V WD+ L+ +RVSPW +E ++P + P +P
Sbjct: 350 AITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALS-CPVAPRI 408
Query: 413 KKLR 416
K+L+
Sbjct: 409 KRLQ 412
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 203/396 (51%), Gaps = 61/396 (15%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-------IPPLIFC 59
SI +LWHACAG ++ +P S V YFPQGH E S+ + +PP IFC
Sbjct: 31 SICLELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQIFC 90
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ AD ETDEVYA++ LVP P + G ++S P F KTLT
Sbjct: 91 RVLNVNLHADQETDEVYAQVTLVPEPEPAEKDLEEEEEDEEAGVLNKS-TPHMFCKTLTA 149
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLLT
Sbjct: 150 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 209
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FVN K L++GD+++FLR ++G+L +GIRRA + + PSS +S
Sbjct: 210 TGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAAR---QQSVIPSSVLSSQ------- 259
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+M+L G S+ N A+
Sbjct: 260 ---------------------SMHL---GVLASAANA------------------VATKS 277
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + + + GMRFKM FETED++ + G I+ +
Sbjct: 278 MFHIFYNPRASPAEFLIPYHKYVKSCNLPLSIGMRFKMRFETEDTAE-RRYTGIITGIGD 336
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP WP S WR L V WDE + +RVSPW +E
Sbjct: 337 VDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIE 372
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV + VGR +DLS L Y+EL L +F +E +L+ V+Y D I
Sbjct: 834 KVHKQGNIVGRAVDLSKLDGYDELISELERLFNME--GLLNDPEKGWQVVYTDNENDIML 891
Query: 670 TGDEPFSDFMKSAKRLTI 687
GD+P+ +F ++ I
Sbjct: 892 VGDDPWQEFCNIVCKILI 909
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/396 (39%), Positives = 212/396 (53%), Gaps = 65/396 (16%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLK 65
S+ +LWHACAG ++ +P S V YFPQGH E ++P+ + +PP +FCRV +K
Sbjct: 42 SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL---SDYPAVAYDLPPHVFCRVVDVK 98
Query: 66 FLADSETDEVYAKIKLVPIPA-----NEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
A+ TDEVYA++ LVP E + E + + +S P F KTLT S
Sbjct: 99 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 158
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 159 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 218
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+KKLV+GD+++FLR DG+L +GIRRA + I G + +P+ C
Sbjct: 219 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQ-IKGSSPFPA--------LC---- 265
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+ +NLN+ L AV A S +
Sbjct: 266 ------------------SQQLNLNT----------------------LTAVVNAISTRS 285
Query: 301 -FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS+ EF + ++ + GMRFKM ETED++ + G I+ +
Sbjct: 286 VFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAE-RRYTGLITGISD 344
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP+ WP S WR L V WD+ + ++ RVSPW +E
Sbjct: 345 MDPVRWPGSKWRCLLVRWDDIEANRH-NRVSPWEIE 379
>gi|304308139|gb|ADL70382.1| auxin response factor10 [Arabidopsis thaliana]
Length = 289
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/328 (50%), Positives = 201/328 (61%), Gaps = 60/328 (18%)
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GT+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP
Sbjct: 1 GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP- 59
Query: 412 RKKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ-- 463
RKK+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ
Sbjct: 60 RKKIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQL 117
Query: 464 FG--------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLL 514
FG + + NKL S +FLSS F P + + +S N+SC L
Sbjct: 118 FGSPSPSLLSDLNLSSYTGNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSL 171
Query: 515 TMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDK 571
TMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 TMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKG 225
Query: 572 VKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLS 631
+ A WN S Q GL+TGHCKVF+ESEDVGRTLDLS
Sbjct: 226 LVARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLS 261
Query: 632 VLSSYEELYRRLAIMFGI-ERSDMLSHV 658
V+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 VIGSYQELYRKLAEMFHIEERSDLLTHV 289
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/397 (39%), Positives = 212/397 (53%), Gaps = 66/397 (16%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLK 65
S+ +LWHACAG ++ +P S V YFPQGH E ++P+ + +PP +FCRV +K
Sbjct: 45 SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL---SDYPAVAYDLPPHVFCRVVDVK 101
Query: 66 FLADSETDEVYAKIKLVP------IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
A+ TDEVYA++ LVP E + E + + +S P F KTLT
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTA 161
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLLT
Sbjct: 162 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLT 221
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FVN+KKLV+GD+++FLR DG+L +GIRRA + I G + +P+ C
Sbjct: 222 TGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQ-IKGSSPFPA--------LC--- 269
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+ +NLN+ L AV A S +
Sbjct: 270 -------------------SQQLNLNT----------------------LTAVVNAISTR 288
Query: 300 P-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
F + Y PRAS+ EF + ++ + GMRFKM ETED++ + G I+ +
Sbjct: 289 SVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAE-RRYTGLITGIS 347
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP+ WP S WR L V WD+ + ++ RVSPW +E
Sbjct: 348 DMDPVRWPGSKWRCLLVRWDDIEANRH-NRVSPWEIE 383
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/472 (37%), Positives = 237/472 (50%), Gaps = 79/472 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +PP+ S V YFPQGH+E S N P+ +PP +
Sbjct: 19 KKCLNSELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ +L AD ETDEVYA++ L P+ A E ++ L S++P + F KTL
Sbjct: 79 CQLHNLTMHADVETDEVYAQMTLQPLSAQE----QKDVCLLPAELGIPSKQPTNYFCKTL 134
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++AKD+HG WKFRHI+RG P+RHL
Sbjct: 135 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHL 194
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVA GD + I WN NN +
Sbjct: 195 LTTGWSVFVSAKRLVA-----------GDAVIFI-----------------WNENNQLLL 226
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R N S S ++ G ++ A AA+
Sbjct: 227 G------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAAAT 262
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PRAS EF + A KA GMRF+M FETE+SS + +MGTI+
Sbjct: 263 NSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITG 321
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPFS R K
Sbjct: 322 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFS-LRLKRP 379
Query: 417 LPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
P FP +G TM +SPL L D GIQ +G++
Sbjct: 380 WPSLPGFP-NGDMTM----------NSPLSWLRGDIGDQGIQSLNFQGYGVT 420
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAIKRTGD 672
+S GR+LD+S S+Y EL LA MFG+ ERS +++ D + GD
Sbjct: 762 KSGSFGRSLDISKFSNYHELRSELAHMFGLEGLLEDPERSGW--QLVFVDRENDVLLLGD 819
Query: 673 EPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGL 711
+P+ +F+ + + IL +G+ G+ P GL
Sbjct: 820 DPWQEFVNNVWYIKILSPLEVQQMGK---DGLDLPNAGL 855
>gi|304308143|gb|ADL70384.1| auxin response factor10 [Arabidopsis thaliana]
Length = 290
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/329 (50%), Positives = 203/329 (61%), Gaps = 61/329 (18%)
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GT+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP
Sbjct: 1 GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP- 59
Query: 412 RKKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ-- 463
RKK+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ
Sbjct: 60 RKKIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQL 117
Query: 464 FG---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCL 513
FG ++ S + NNKL S +FLSS F P + + +S N+SC
Sbjct: 118 FGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCS 171
Query: 514 LTMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
LTMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 LTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAQEEK 225
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
+ A WN Q GL+TGHCKVF+ESEDVGRTLDL
Sbjct: 226 GLVARG--------------------LTWNYGLQ----GLETGHCKVFMESEDVGRTLDL 261
Query: 631 SVLSSYEELYRRLAIMFGI-ERSDMLSHV 658
SV+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 SVIGSYQELYRKLAEMFHIEERSDLLTHV 290
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/399 (38%), Positives = 207/399 (51%), Gaps = 71/399 (17%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLK 65
S+ +LWHACAG ++ +P S V Y PQGH EH +FP ++ IPP +FCRV +K
Sbjct: 49 SVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQ---DFPVTAYDIPPHVFCRVLDVK 105
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK---------PASFAKT 116
A+ +DEVY ++ LVP E + + +L + +D E E P F KT
Sbjct: 106 LHAEEGSDEVYCQVLLVP----ESEQVEQSLREGEIVADGEEEDTEAIVKSTTPHMFCKT 161
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRH 221
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FVN+KKLV+GD+++FLR DG+L +GIRRA +
Sbjct: 222 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQ-------------------- 261
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
L S GSF +G ++ P + V +
Sbjct: 262 ---------------------------LKSAGSFAVP-----SGQQLNPATLKGVVNALS 289
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+ F V Y PR S+ EF + ++ + GMRF+M FETED++ G I+
Sbjct: 290 TRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAE-RRCTGLIAG 348
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ W S WR L V WD+ + + RVSPW +E
Sbjct: 349 ISDVDPVRWLGSKWRCLLVRWDDIEAARR-NRVSPWEIE 386
>gi|304308147|gb|ADL70386.1| auxin response factor10 [Arabidopsis thaliana]
Length = 289
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 167/328 (50%), Positives = 203/328 (61%), Gaps = 61/328 (18%)
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
T+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP R
Sbjct: 1 TVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-R 59
Query: 413 KKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--F 464
KK+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ F
Sbjct: 60 KKIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLF 117
Query: 465 G---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLL 514
G ++ S + NNKL S +FLSS F P + + +S N+SC L
Sbjct: 118 GSPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSL 171
Query: 515 TMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDK 571
TMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 TMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKG 225
Query: 572 VKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLS 631
+ A WN S Q GL+TGHCKVF+ESEDVGRTLDLS
Sbjct: 226 LVARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLS 261
Query: 632 VLSSYEELYRRLAIMFGI-ERSDMLSHV 658
V+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 VIGSYQELYRKLAEMFHIEERSDLLTHV 289
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 154/197 (78%), Gaps = 2/197 (1%)
Query: 20 MVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKI 79
MVQ+P +NS VFYFPQGHAEH+ VNF + S+IP I CRV ++++A+ ETDEVYAK+
Sbjct: 1 MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSFIPCRVEDIRYMANHETDEVYAKL 60
Query: 80 KLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIF 139
+LVP+ N++ F+++ ++ + +K SFAKTLTQSDANNGGGFS PRYCAE IF
Sbjct: 61 RLVPMNINQVSFDNDGVA--GINVSETKDKHQSFAKTLTQSDANNGGGFSCPRYCAEMIF 118
Query: 140 PRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF 199
PR+DY+ +PP Q + KDVHGE W FRH+YRGTP+RHLLTTGWS FV+ KKL +GDS+VF
Sbjct: 119 PRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSDKKLASGDSVVF 178
Query: 200 LRAQDGDLCVGIRRAKK 216
LR+++G+L VGI R K+
Sbjct: 179 LRSENGELRVGIWREKR 195
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/427 (38%), Positives = 216/427 (50%), Gaps = 70/427 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP----SSSRIPPLIFCRVSSLKF 66
+LWH CAG + +P + V YFPQGH E + S FP S+ +PP IFCRV +++
Sbjct: 55 ELWHVCAGRLTSLPKKGNVVVYFPQGHLEQAASSSPFPPMDISTFDLPPQIFCRVVNVQL 114
Query: 67 LADSETDEVYAKIKLVPIPA-NEIDFEDNNLSLNSVGSDSE-------SEKPASFAKTLT 118
LA+ E DEVY ++ L+P P I+ E L +G D E P F KTLT
Sbjct: 115 LANKENDEVYTQVTLLPQPELAGINLEGKELE--GLGVDEEGGGGSPTKSTPHMFCKTLT 172
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLL
Sbjct: 173 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 232
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+QK LV+GD+++FLR + G+L +GIRRA + G P S +
Sbjct: 233 TTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNG---LPDS---------II 280
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G N NSY P ++ A A+
Sbjct: 281 G-----------------------NQNSY-----------------PNVLSLAANAVATK 300
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSV 357
F V Y PRAS EF + ++ G RFKM ++ +DS R S G ++ +
Sbjct: 301 SMFHVFYSPRASHAEFVIPYQKYVKSITNPISIGTRFKMRYDMDDSPERRS--SGVVTGI 358
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP WPNS WR L V WD+ + +RVSPW ++ ++P + + SP KKLR
Sbjct: 359 GDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQS-SPRLKKLRT 417
Query: 418 PQQLDFP 424
Q P
Sbjct: 418 SLQATPP 424
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y +L+ L +FG+E D +LY D+ + G
Sbjct: 674 KVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGLLRDPDKGWQILYTDSENDMMVVG 733
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 734 DDPWHEFCNVVSKIHI 749
>gi|304308145|gb|ADL70385.1| auxin response factor10 [Arabidopsis thaliana]
Length = 290
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 167/329 (50%), Positives = 203/329 (61%), Gaps = 61/329 (18%)
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GT+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP
Sbjct: 1 GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP- 59
Query: 412 RKKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ-- 463
RKK+R+PQ +FPF G +F + P F+ N G S +C LS +N AGIQGAR AQ
Sbjct: 60 RKKIRIPQPFEFPFHGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQL 117
Query: 464 FG---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCL 513
FG ++ S + NNKL S +FLSS F P + + +S N+SC
Sbjct: 118 FGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCS 171
Query: 514 LTMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
LTMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 LTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEK 225
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
+ A WN S Q GL+TGHCKVF+ESEDVGRTLDL
Sbjct: 226 GLVARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDL 261
Query: 631 SVLSSYEELYRRLAIMFGI-ERSDMLSHV 658
SV+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 SVIGSYQELYRKLAEMFHIEERSDLLTHV 290
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 261 bits (667), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 224/433 (51%), Gaps = 64/433 (14%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K I+ QLWHACAG +V +PP+ S V YFPQGH+E S+ P+ +P + C
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ S+ AD+ETDEVYA++ L P+ N+ D E L + +G + F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPV--NKYDREA--LLASDMGLKLNRQPTEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ K+L AGDS++F+R +G+ + KG W
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVR-------IGLSSSHKGT----------W---------- 225
Query: 240 NPFGGFSCFLREEENKMA---RNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
R+E++++ R N + S S ++ G ++ A A
Sbjct: 226 --------VCRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIG------ILAAAAHANA 271
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+ PF + + PRAS EF V + A+ GMRF+M FETED + +MGT++
Sbjct: 272 NSSPFTIFFNPRASPSEFIVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTG 330
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARK 413
+ DP+ W S WR LQV WDE RVS W +E PVI +PF P
Sbjct: 331 ISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE-----PVI--TPFYICPPPFF 383
Query: 414 KLRLPQQLDFPFD 426
+ + P+Q P D
Sbjct: 384 RPKYPRQPGMPDD 396
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL LA MFGIE D L+ ++Y D I GD+P+ +F
Sbjct: 979 VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEF 1038
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1039 VNCVQNIKIL 1048
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 222/693 (32%), Positives = 309/693 (44%), Gaps = 115/693 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S + PS + +P I C+V ++
Sbjct: 26 ELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVDQHLPSFN-LPAKILCKVMNV 84
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A+SETDEVYA+I L+P P EI D L + E SF KTLT SD +
Sbjct: 85 QLRAESETDEVYAQITLLPEPDQGEITSPDPPLP------EPEKCTVHSFCKTLTASDTS 138
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 139 THGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFRGQPRRHLLTTGWS 198
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVAGD+ +FLR G+L VG+RR + + N PSS +S+
Sbjct: 199 VFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQL---NNMPSSVISSH----------- 244
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L ++ A +G F V
Sbjct: 245 -----------------SMHLG---------------------VLATASHAIMTGTLFSV 266
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF V + A GMRFKM FE E+ F GTI V
Sbjct: 267 FYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKMRFEGEEVPERR-FSGTIVGVGDNPSS 325
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS---PARKKLRLPQQ 420
WP+S WR L+V WDEP + RVSPW +E P++ +P + P R K P
Sbjct: 326 RWPDSEWRSLKVHWDEPSSILRPDRVSPWDME-----PLVAATPTNTQPPQRNKRARPSV 380
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
L P + ++ PSS C + S G D + + K
Sbjct: 381 LPSPVQELPALGMWKSPVDSPSSFSYC---DPSRG-------------RDLYPSPK---- 420
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTN--SSENLSCLLTMGNSNQNLEKSENIKKHQFLLFG 538
LSS + + L++ T SS++ +C ++ + SE + LFG
Sbjct: 421 --LSSAAKGLGYGENGSMPLSTKTMYWSSQSETCTESVAPA------SEKRPANGCRLFG 472
Query: 539 QPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFF 598
+ I S S + S V+ + +S+ S EKSS
Sbjct: 473 IELLDCPTIDESSSVAMPSAVVEDQPVPSLNVDSDRNSEPSNPIPSVSCEPEKSSL---- 528
Query: 599 WNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDM 654
RS ++S KV ++ + VGR +DL+ L SYE+L ++L +MF IE S
Sbjct: 529 --RSTHESQSKQIRSCTKVHMQGKAVGRAVDLTRLDSYEDLLKKLEVMFEIEGELRGSTK 586
Query: 655 LSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+ F +++ +
Sbjct: 587 KWQVVYTDDEDDMMMVGDDPWHGFCSMVRKIYV 619
>gi|304308137|gb|ADL70381.1| auxin response factor10 [Arabidopsis thaliana]
Length = 288
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/327 (50%), Positives = 202/327 (61%), Gaps = 61/327 (18%)
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RK
Sbjct: 1 VSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RK 59
Query: 414 KLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG 465
K+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 60 KIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFG 117
Query: 466 ---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLT 515
++ S + NNKL S +FLSS F P + + +S N+SC LT
Sbjct: 118 SPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLT 171
Query: 516 MGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
MGN +K + ++K HQF+LFGQPI TEQQ+ + + L + + +
Sbjct: 172 MGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGL 225
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
A WN S Q GL+TGHCKVF+ESEDVGRTLDLSV
Sbjct: 226 VARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSV 261
Query: 633 LSSYEELYRRLAIMFGI-ERSDMLSHV 658
+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 IGSYQELYRKLAEMFHIEERSDLLTHV 288
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/401 (38%), Positives = 209/401 (52%), Gaps = 69/401 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEH----SLGSVNFPSSSRIPPLIFC 59
V S+ +LWHACAG ++ +P S V YFPQGH E L + PS IFC
Sbjct: 46 VSGSVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQLPDLPLAVYDLPS------YIFC 99
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSESEKPAS----FA 114
RV +K A++ DEVYA++ LVP E + L + D E+ ++ F
Sbjct: 100 RVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLEGHCEEEDVEAVVKSTTTHMFC 159
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PR
Sbjct: 160 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHIYRGQPR 219
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLLTTGWS FVN+KKLV+GD+++FLR DG+L +GIRRA + + G +P+ N
Sbjct: 220 RHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQ-VKCGASFPALCSQQLNQ 278
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
S +T V+ A+++
Sbjct: 279 STLTD------------------------------------------------VVHAMSM 290
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
+ F + Y PRAS+ EF + ++ + GMRFKM FETED++ +MG I
Sbjct: 291 RSL---FNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFETEDAAE-RRYMGLI 346
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ + DP WP S WR L V WD+ + ++ RVSPW +E
Sbjct: 347 TGISDLDPARWPGSKWRCLVVRWDDMETNRH-SRVSPWEIE 386
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 175/439 (39%), Positives = 220/439 (50%), Gaps = 80/439 (18%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIF 58
V SI +LWHACAG + +P + V YFPQGH E S F S +P P IF
Sbjct: 40 VTSSIYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQVAPSSPF-SPMEMPTFDLQPQIF 98
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLS---LNSVGSDSE-------SE 108
C+V +++ LA+ E DEVY ++ L+P P + NL L +G D E
Sbjct: 99 CKVVNVQLLANKENDEVYTQLALLPQP----ELVGPNLEVKELEELGVDEEGGGGLPAKS 154
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
P F KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHI
Sbjct: 155 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 214
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSG 228
YRG PRRHLLTTGWS FV+QK LV+GD+++FLR +DG+L +GIRRA + G P S
Sbjct: 215 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNG---LPDS- 270
Query: 229 WNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMV 288
V G NSY S V
Sbjct: 271 --------VIGK-----------------------QNSYPS------------------V 281
Query: 289 LEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--S 345
L VA A S K F V+Y PRAS +F V ++ G RFKM FE +DS
Sbjct: 282 LSVVANAISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDDSPER 341
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL 405
R S G ++ + +P WPNS WR L V WDE + +RVSPW ++ ++P + +
Sbjct: 342 RCS---GVVTGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLPPLSI 398
Query: 406 SPFSPARKKLRLPQQLDFP 424
SP KKLR Q P
Sbjct: 399 QS-SPRLKKLRTSLQATPP 416
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 220/411 (53%), Gaps = 66/411 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + ++ +PP + CRV ++
Sbjct: 23 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVLNV 82
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
+ A+++TDEVYA+I L+P P + D S + + S +PA SF KTLT SD
Sbjct: 83 ELKAETDTDEVYAQIMLMPEP-EQTDVPAEKPS----SAPAASPRPAVRSFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +GW
Sbjct: 138 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + + PSS +S
Sbjct: 198 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQL---SNVPSSVISSQ---------- 244
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M+L + + NT+ F
Sbjct: 245 ------------------SMHLGVLATAWHAINTKSM---------------------FT 265
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP
Sbjct: 266 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGCENLDP 324
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+ WP+S WR L+V WDEP + RVSPW +E S+ PV L S A++
Sbjct: 325 L-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKR 374
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 600 NRSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-- 656
++ Q G T C KV + +GR++DLS + Y EL L MF E +++S
Sbjct: 677 SKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFE-GELVSGS 735
Query: 657 ---HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSD 694
++Y D G + GD+P+ SA+ L + G G +
Sbjct: 736 QNWQIVYTDDEGDMMLVGDDPWEVLQHSAQDLHLHEGGGPE 776
>gi|304308141|gb|ADL70383.1| auxin response factor10 [Arabidopsis thaliana]
Length = 289
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/328 (50%), Positives = 202/328 (61%), Gaps = 61/328 (18%)
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
T+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP R
Sbjct: 1 TVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-R 59
Query: 413 KKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--F 464
KK+R+PQ +FPF G +F + P F+ N G S +C LS +N AGIQGAR AQ F
Sbjct: 60 KKIRIPQPFEFPFHGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLF 117
Query: 465 G---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLL 514
G ++ S + NNKL S +FLSS F P + + +S N+SC L
Sbjct: 118 GSPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSL 171
Query: 515 TMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDK 571
TMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 TMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKG 225
Query: 572 VKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLS 631
+ A WN S Q GL+TGHCKVF+ESEDVGRTLDLS
Sbjct: 226 LVARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLS 261
Query: 632 VLSSYEELYRRLAIMFGI-ERSDMLSHV 658
V+ SY+ELYR+LA MF I ERSD+L+HV
Sbjct: 262 VIGSYQELYRKLAEMFHIEERSDLLTHV 289
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 214/400 (53%), Gaps = 66/400 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + ++ +PP + CRV ++
Sbjct: 23 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVLNV 82
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
+ A+++TDEVYA+I L+P P + D S + + S +PA SF KTLT SD
Sbjct: 83 ELKAETDTDEVYAQIMLMPEP-EQTDVPAEKPS----SAPAASPRPAVRSFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +GW
Sbjct: 138 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 198 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ---------- 244
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M+L + + NT+ F
Sbjct: 245 ------------------SMHLGVLATAWHAINTKSM---------------------FT 265
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP
Sbjct: 266 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGCENLDP 324
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ WP+S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 325 L-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 363
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 600 NRSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-- 656
++ Q G T C KV + +GR++DLS + Y EL L MF E +++S
Sbjct: 677 SKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFE-GELVSGS 735
Query: 657 ---HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
++Y D G + GD+P+ +F +++ I
Sbjct: 736 QNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYI 769
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/395 (38%), Positives = 208/395 (52%), Gaps = 71/395 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH----SLGSVNFPSSSRIPPLIFCRVSSLKF 66
+LWHACAG ++ +P S V YFPQGH E L + PS +FCRV +K
Sbjct: 49 ELWHACAGPLISLPKRGSVVVYFPQGHLEQLPDLPLAVYDLPSH------VFCRVVDVKL 102
Query: 67 LADSETDEVYAKIKLVPIPANEIDFE------DNNLSLNSVGSDSESEKPASFAKTLTQS 120
A++ +DEVYA++ LVP + EI+ + + + + + P F KTLT S
Sbjct: 103 HAEAASDEVYAQVSLVP-ESEEIEQKLREGIFEGDGEEEDGEATVKMTTPHMFCKTLTAS 161
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LDYT P Q +VAKD+HG WKFRHIYRG PRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTT 221
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+KKLV+GD+++FLR +DG+L +G+RRA + + G +P+ WN
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQ-VKCGPTFPAQ-WN---------- 269
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+ N+++ N S SF
Sbjct: 270 ----------HQLNQISPGDVANAISTRSF------------------------------ 289
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PRAS+ EF + + ++ + GMRFKM FETED++ + G I+ V
Sbjct: 290 FHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDAAERR-YTGIITGVSEL 348
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP WP S W+ L V WD+ + + RVSPW VE
Sbjct: 349 DPARWPGSKWKCLLVRWDDRE-ANRLSRVSPWEVE 382
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 219/428 (51%), Gaps = 71/428 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E + S++ SS IP P I CRV +++
Sbjct: 56 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-VASLSLFSSLEIPTYGLQPQILCRVVNVQ 114
Query: 66 FLADSETDEVYAKIKLVPIPANEI------DFEDNNLSLNSVGSDSESEKPAS--FAKTL 117
LA+ E DEVY ++ L +P E+ D E L + G+ K AS F KTL
Sbjct: 115 LLANKENDEVYTQVAL--LPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHL
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHL 232
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+QK LV+GD+++FLR ++G+L +GIRRA + G P S +
Sbjct: 233 LTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNG---LPES---------I 280
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
GN SC SF SS VA A S
Sbjct: 281 IGNQ----SC-------------------SPSFLSS------------------VANAIS 299
Query: 298 GKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
K F V Y PRAS +F V ++R G RFKM FE ++S G ++
Sbjct: 300 AKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRCSSGIVTG 359
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP WP S WR L V WDE + RVSPW ++ +++P +++ S KKLR
Sbjct: 360 MSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQS-SRRLKKLR 418
Query: 417 LPQQLDFP 424
++ P
Sbjct: 419 TGLHVESP 426
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS LSSY +L L +FG+E D +LY D+ I G
Sbjct: 686 KVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVG 745
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 746 DDPWHEFCDMVSKIHI 761
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/402 (38%), Positives = 205/402 (50%), Gaps = 74/402 (18%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEH-------SLGSVNFPSSSRIPPLIFC 59
SI +LWHACAG ++ +P + V YFPQGH E S +PP IFC
Sbjct: 36 SICMELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQIFC 95
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPA----NEIDFEDNNLSLNSVGSDSESEKPA--SF 113
RV ++ LAD ETDEV+A++ LVP P N D E+ N S+ S KP F
Sbjct: 96 RVLNVNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASVLS--------KPTLHMF 147
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE FP LDYT P Q ++AKD+HG WKFRHIYRG P
Sbjct: 148 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQP 207
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
RRHLLTTGWS FV+ K L +++FLR ++G+L +GIRR + + + PSS ++ N
Sbjct: 208 RRHLLTTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKL---SSVPSSVFSDQN 264
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
V ++ A
Sbjct: 265 -------------------------------------------------VYLSVIAAATN 275
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+ F + Y PRAS EF + + + L G RF+M FE+ED++ + G
Sbjct: 276 AVATKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDTAE-KRYTGI 334
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
++S+ ADP+ WP S WR L+V WDE L + +RVSPW +E
Sbjct: 335 VTSIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIE 376
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 219/411 (53%), Gaps = 66/411 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + ++ +PP + CRV ++
Sbjct: 17 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVLNV 76
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
+ A+++TDEVYA+I L+P P + D S + + S +PA SF KTLT SD
Sbjct: 77 ELKAETDTDEVYAQIMLMPEP-EQTDVPAEKPS----SAPAASPRPAVRSFCKTLTASDT 131
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +GW
Sbjct: 132 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 191
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 192 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ---------- 238
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M+L + + NT+ F
Sbjct: 239 ------------------SMHLGVLATAWHAINTKSM---------------------FT 259
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP
Sbjct: 260 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGCENLDP 318
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+ WP+S WR L+V WDEP + RVSPW +E S+ PV L S A++
Sbjct: 319 L-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKR 368
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 600 NRSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-- 656
++ Q G T C KV + +GR++DLS + Y EL L MF E +++S
Sbjct: 671 SKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFE-GELVSGS 729
Query: 657 ---HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
++Y D G + GD+P+ +F +++ I
Sbjct: 730 QNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYI 763
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/468 (35%), Positives = 225/468 (48%), Gaps = 103/468 (22%)
Query: 9 DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLA 68
D +W ACA + ++P + S V+YFP GH+E P+ + P C V++++ A
Sbjct: 24 DRDVWLACATPLSRVPVVGSQVYYFPHGHSEQCPTPPRAPAHNLFP----CTVAAVRLFA 79
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF---AKTLTQSDANNG 125
D +TDE +A + LVP P + + S + +P +F AK LTQSDANNG
Sbjct: 80 DPKTDEPFATVSLVPGPHRAPAPDLPHAS-------ARRPEPTAFRYYAKQLTQSDANNG 132
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR+CAE +FP LD+ ADPPVQ + D G+ W FRHIYRGTPRRHLLTTGWS F
Sbjct: 133 GGFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTTGWSKF 192
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
VN K LVAGD++VF+R DG+L GIRRA + F
Sbjct: 193 VNAKLLVAGDAVVFMRRADGELLTGIRRAPR----------------------------F 224
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
++ + RN RV P+ V +AV LAA G PF V Y
Sbjct: 225 PAVSQQGPERRPRNAR-------------------ARVPPQEVDDAVRLAAEGAPFTVTY 265
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
YPR EF V V+ A+ W G++ +M F + R W G + +V
Sbjct: 266 YPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKFLDAEERRSEWINGVVKAVD------- 318
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ------ 419
PN WR+L++ W E + V+ W VE V + P++ KKL++ +
Sbjct: 319 PNI-WRMLEINWAESVAGSLNRYVNAWQVEHVGHPPIL---------KKLKISEVHHPLC 368
Query: 420 QLDFPFDGQF------TMPLFSGNPLGPSSPLCCLSDNTSAGIQGARH 461
+D Q M + G+P+ AG+QGARH
Sbjct: 369 SVDVGMADQLLGTDCQNMVMLMGSPI-------------PAGMQGARH 403
>gi|304308151|gb|ADL70388.1| auxin response factor10 [Arabidopsis thaliana]
Length = 288
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 165/327 (50%), Positives = 201/327 (61%), Gaps = 61/327 (18%)
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GT+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP
Sbjct: 1 GTVSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP- 59
Query: 412 RKKLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ-- 463
RKK+R+PQ +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ
Sbjct: 60 RKKIRIPQPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQL 117
Query: 464 FG---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCL 513
FG ++ S + NNKL S +FLSS F P + + +S N+SC
Sbjct: 118 FGSPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCS 171
Query: 514 LTMGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD 570
LTMGN +K + ++K HQF+LFGQPI TEQQ+ + + L + +
Sbjct: 172 LTMGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAQEEK 225
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDL 630
+ A WN Q GL+TGHCKVF+ESEDVGRTLDL
Sbjct: 226 GLVARG--------------------LTWNYGLQ----GLETGHCKVFMESEDVGRTLDL 261
Query: 631 SVLSSYEELYRRLAIMFGI-ERSDMLS 656
SV+ SY+ELYR+LA MF I ERSD+L+
Sbjct: 262 SVIGSYQELYRKLAEMFHIEERSDLLT 288
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 223/701 (31%), Positives = 312/701 (44%), Gaps = 120/701 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P I C+V +++
Sbjct: 20 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPHKILCKVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P + + S F KTLT SD +
Sbjct: 80 LRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHS-----FCKTLTASDTSTH 134
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R AE P+LD T +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 135 GGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 194
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 195 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH------------- 238
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+M+L ++ A ++G F V Y
Sbjct: 239 ---------------SMHLG---------------------VLATASHAISTGTLFSVFY 262
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS- 364
PR S EF V + A GMRFKM FE ++S F GTI + S
Sbjct: 263 KPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERR-FSGTIIGMGCMPANST 321
Query: 365 --WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA----RKKLRLP 418
W NS WR L+V WDEP + RVSPW VE P+ +P P K+ R P
Sbjct: 322 SPWANSEWRSLKVQWDEPSAILRPDRVSPWEVE-----PLDRTNPQPPQPPLRNKRARPP 376
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQ 478
P P+F G P+ P S +G+Q R + SS ++ L
Sbjct: 377 AS---PSIAPELAPVF-GFWKSPAEPAQAFS---FSGLQ--RTQELYHSSPSSMFSSSLN 427
Query: 479 SGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFG 538
G F + TPN+ T +E+ S + + EK + LFG
Sbjct: 428 VG-FNPKYEGPTPNTNHL--YWTMRETRTESYSASINKAPT----EKKQESTTSGCRLFG 480
Query: 539 --------QPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIE 590
P+ T + H + S D SD++ S +H + +
Sbjct: 481 IEIGSSAVSPVVTVASVGHDPPPPAL-------SVDAESDQL------SQPSHANKATDA 527
Query: 591 KSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI- 649
++SS +RS TES KV ++ VGR +DL+ L Y++L R+L MF I
Sbjct: 528 PAASS----DRSPNETESRQARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIP 583
Query: 650 -ERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
E S L V+Y D + GD+P+S+F + KR+ I
Sbjct: 584 GELSASLKKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYI 624
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 154/421 (36%), Positives = 220/421 (52%), Gaps = 68/421 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS------VNFPSSSRIPPLIF 58
EK I+ +LWHACAG +V +PP+ S V YFPQGH+E S ++ P+ + P +
Sbjct: 32 EKRINSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPHLI 91
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C + ++ AD ETD+VYA++ L+P D E + L V ++++P F KTL
Sbjct: 92 CTLENVTLHADLETDDVYAQMVLIPTQ----DPEKETMLLPDVVV--QNKQPTEYFCKTL 145
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR-GTPRRH 176
T SD + GGFS+PR AE +FP LDYT PP Q +VA+D+H + W FRHIYR G PRRH
Sbjct: 146 TASDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRH 205
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F++ K+L AGD+++F+R G L +GIRRA + PSS +S+
Sbjct: 206 LLTTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANR---LQTIMPSSVLSSD---- 258
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M++ + + + T
Sbjct: 259 ------------------------SMHIGILAAASHAAQTSSR----------------- 277
Query: 297 SGKPFEVVYYPRASTPEFCV-KASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
F + Y PR S EF + A KA GMRF+M FETE+S+ + +MGT++
Sbjct: 278 ----FTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEEST-VRRYMGTVT 332
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
+ DP+ WPNS WR L+V WDE + +RVS W +E ++ +I P K+
Sbjct: 333 GIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTTPFLICPPPIVLRSKRA 392
Query: 416 R 416
R
Sbjct: 393 R 393
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 216/713 (30%), Positives = 318/713 (44%), Gaps = 145/713 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S + + +PP I CRV ++
Sbjct: 22 ELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMFDLPPKILCRVVNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNL-SLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A++++DEVYA+I L P + + N L SL++ + E SF KTLT SD +
Sbjct: 82 ELRAEADSDEVYAQIMLQP------EADQNELTSLDAEPQEREKCTAHSFCKTLTASDTS 135
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG P+RHLLTTGWS
Sbjct: 136 THGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWS 195
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LV+GD+ +F+R ++G+L VG+RR + + N PSS +S+
Sbjct: 196 VFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQV---NSMPSSVISSH----------- 241
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L + + + +T G F V
Sbjct: 242 -----------------SMHLGVLATASHAIST---------------------GTLFSV 263
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S +F V + A + GMRFKM FE +D+ F GTI + +
Sbjct: 264 FYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDDAPERR-FSGTIIGIGSLPAM 322
Query: 364 S---WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
S W +S WR L+V WDEP + R+SPW VE P+ +P SP
Sbjct: 323 SKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVE-----PLDAANPQSP---------- 367
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
PL + P P+SP C+ +G FG+ S + L
Sbjct: 368 ---------QPPLRAKRPRPPASP--CMVSELPSG--------FGLWKSPIESSCTLSFS 408
Query: 481 LFLSSLQRFTPNSRDFD--------------GILTS-------HTNSSENLSCLLTMGNS 519
+ + F +LTS HT + SC +
Sbjct: 409 EPQRARELFPSIPTSTLSSSSNVSFNSKNEPSMLTSQFYWSARHTRAD---SC--AASTN 463
Query: 520 NQNLEKSENIKKHQFLLFGQPI-RTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
+EK + LFG I E+++ + V +S + +SDK+ SD
Sbjct: 464 TVVIEKKQEPSSGGCRLFGINICSAEEEVLPEVTAPGVGYEQTAASVELNSDKLSQPSDV 523
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
+ S ++ SS ++S QV KV ++ VGR +DL+ LS Y +
Sbjct: 524 NNSD-----ALAASSERSPLESQSRQVRSC------TKVIMQGMAVGRAVDLTKLSGYSD 572
Query: 639 LYRRLAIMFGI--ERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L ++L MF I E L V++ D + GD+P+ +F + KR+ I
Sbjct: 573 LCQKLEEMFDIQGELGSTLKKWRVIFTDDEDDMMLVGDDPWDEFCRMVKRIYI 625
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 216/427 (50%), Gaps = 69/427 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + + + V YFPQGH E + S + + IP P IFCRV +++
Sbjct: 54 ELWHACAGPLTSLLKKGNVVVYFPQGHLEQ-VASFSPFTPLEIPTYDLQPQIFCRVVNVQ 112
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK-------PASFAKTLT 118
LA+ E DEVY ++ L+P P E + + L +G++ + ++ P F KTLT
Sbjct: 113 LLANKENDEVYTQVTLLPQPELEGMYSEGK-ELEELGAEEDGDERSPTKSTPHMFCKTLT 171
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLL
Sbjct: 172 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 231
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+QK LV+GD+++FLR ++G+L +GIRRA + N+ P S S N
Sbjct: 232 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRA---VRPRNDLPESVIGSQN----- 283
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
C+ VL +VA A S
Sbjct: 284 --------CY-------------------------------------SNVLSSVANAIST 298
Query: 299 K-PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K F V Y PRAS +F V +++ G RFKM FE ++S GT+ +
Sbjct: 299 KSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCSSGTLIAT 358
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP W S WR L V WDE + RVSPW ++ + +P + + SP KKLR
Sbjct: 359 SDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDPSAPLPPLSIQS-SPRLKKLRT 417
Query: 418 PQQLDFP 424
Q+ P
Sbjct: 418 GLQVASP 424
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS LS Y +L L +F +E D +LY D+ I G
Sbjct: 667 KVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWRILYTDSENDIMVVG 726
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 727 DDPWHEFCDVVSKIHI 742
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 204/393 (51%), Gaps = 62/393 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG ++ +P S V YFPQGH E + + +PP I CRV +K A+
Sbjct: 39 ELWHACAGPLISLPQKGSVVVYFPQGHLEQHQVQESHTRTYDLPPQIICRVVDVKLQAEV 98
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK--------PASFAKTLTQSDA 122
DE+YA++ L + +E+ F D ++ + G + SE+ P F KTLT SD
Sbjct: 99 SNDELYAQVSL--LAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTLTASDT 156
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY+ P Q + AKD++G IW+FRHIYRG PRRHLLTTGW
Sbjct: 157 STHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHLLTTGW 216
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S+F N+KKL GD+++FLR DG+L +GIRRA + + CV P+
Sbjct: 217 SSFANKKKLKPGDAVLFLRVDDGELRLGIRRATR---------------QSQCCV---PY 258
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
G C L +N+ S MV +A+++ K F
Sbjct: 259 TGLLCQL----------SRVNMLS--------------------MVADALSVK---KLFH 285
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
+ Y PRAS EF V + + GMR K+ ETED+ + G I+ V DP
Sbjct: 286 IYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVE-KRYTGHITGVGDVDP 344
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
I WPNS WR L V WD+ RVSPW +E
Sbjct: 345 IRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIE 377
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/475 (36%), Positives = 235/475 (49%), Gaps = 81/475 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +PP+ S V YFPQGH+E S N P+ +PP +
Sbjct: 19 KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ +L AD ETDEVYA++ L P+ E ++ L S++P + F KTL
Sbjct: 79 CQLHNLTMHADVETDEVYAQMTLQPLSPQE----QKDVCLLPAELGIPSKQPTNYFCKTL 134
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T S + GGFSVPR AE +FP LDY+ PP Q ++AKD+HG WKFRHI+RG P+RHL
Sbjct: 135 TASGTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHL 194
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVA GD + I WN NN +
Sbjct: 195 LTTGWSVFVSAKRLVA-----------GDAVIFI-----------------WNENNQLLL 226
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R N S S ++ G ++ A AA+
Sbjct: 227 G------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAAAT 262
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+
Sbjct: 263 NSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITG 321
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL- 415
+ DP+ WPNS WR ++V WDE RVS W +E ++ P ++ SPFS K+
Sbjct: 322 ISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFP-MYPSPFSLRLKRPW 380
Query: 416 --RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
LP FP +G M +SPL L D G+Q FG++
Sbjct: 381 PSGLPSLTGFP-NGDMAM----------NSPLSWLRGDMGDQGMQSLNFQGFGVT 424
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAIKRTGD 672
+S GR+LD+S SSY EL LA MFG+ ERS ++ D + GD
Sbjct: 764 KSGSFGRSLDISKFSSYHELRSELARMFGLEGLLEDPERSGW--QLVIVDRENDVLLLGD 821
Query: 673 EPFSDFMKSAKRLTILMGSGSDSVGRT---WITGMRTPK-----NGLD 712
+P+ +F+ + + IL +G+ + G+RT + NG D
Sbjct: 822 DPWQEFVNNVWYIKILSPYEVQQMGKEGLDLLNGVRTQRLPGNVNGCD 869
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/419 (38%), Positives = 210/419 (50%), Gaps = 69/419 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E + F S +P P IFCRV +++
Sbjct: 50 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPF-SPMEMPTYDLQPQIFCRVVNIQ 108
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK-------PASFAKTLT 118
LA+ E DEVY ++ L+P A L +G+D E + P F KTLT
Sbjct: 109 LLANKENDEVYTQVTLLP-QAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKTLT 167
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLL
Sbjct: 168 ASDTSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLL 227
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+QK LV+GD+++FLR ++G+L +GIRRA + G E S V
Sbjct: 228 TTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPE-----------SIVG 276
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+ Y +F SS VA A S
Sbjct: 277 SQSY------------------------YPNFLSS------------------VANAISA 294
Query: 299 KP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K F V Y PRAS +F V +++ G RFKM FE ++S G ++ +
Sbjct: 295 KSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKFEMDESPERRCTSGIVTGM 354
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
DP WP S WR L V WDE + + RVSPW V+ +++P + + S KKLR
Sbjct: 355 SDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLSIQS-SRRLKKLR 412
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS LSSY +L L +F +E + +LY D+ I G
Sbjct: 668 KVHKQGSLVGRAIDLSRLSSYNDLLIELERLFSMEGLLIDPNKGWRILYTDSENDIMVVG 727
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 728 DDPWHEFCDVVSKIHI 743
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 221/697 (31%), Positives = 309/697 (44%), Gaps = 115/697 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P I C+V +++
Sbjct: 26 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVE 85
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNL-SLNSVGSDSESEKPASFAKTLTQSDANN 124
A++++DEVYA+I L P + + N L S + E SF KTLT SD +
Sbjct: 86 LRAETDSDEVYAQIMLQP------EADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTST 139
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R AE P LD T +PP Q +VA+D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 200 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH------------ 244
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+M+L ++ A ++G F V
Sbjct: 245 ----------------SMHLG---------------------VLATASHAISTGTLFSVF 267
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S EF V A+ A GMRFKM FE +++ F GTI V
Sbjct: 268 YKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERR-FSGTIIGVGSMSTSP 326
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPARKKLRLPQQLD 422
W NS WR L+V WDEP ++ RVSPW +E VSN SP PAR K P
Sbjct: 327 WANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNS---QPSPQPPARNKRARPP--- 380
Query: 423 FPFDGQFTMPLFSGNPLGPS-SPLCCLSDNTSAGIQG------ARHAQFGISSSDFHVNN 475
+ N + P P+ L +++ QG R + SS + +
Sbjct: 381 ------------ASNSIAPELPPVFGLWKSSAESTQGFSFSGLQRTQELYPSSPNPIFST 428
Query: 476 KLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFL 535
L G + N + + + NS + S EK +
Sbjct: 429 SLNVGFSTKNEPSALSNKHFYWPMRETRANS-------YSASISKVPSEKKQEPSSAGCR 481
Query: 536 LFGQPIRTE-QQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSS 594
LFG I + + S + V Q +S D SD++ S + S ++S
Sbjct: 482 LFGIEISSAVEATSPLAAVSGVGQDQPAASVDAESDQLSQPSHANKSD-------APAAS 534
Query: 595 SEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERS 652
SE S T+S KV ++ VGR +DL+ L Y++L +L MF I E S
Sbjct: 535 SE----PSPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELS 590
Query: 653 DMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L V+Y D + GD+P+ +F KR+ I
Sbjct: 591 ASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYI 627
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 213/433 (49%), Gaps = 69/433 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF-PSSSRIP-----PLIFCRVSSL 64
+LW+ACAG + +P + V YFPQGH E + S F P +P P IFCRV +
Sbjct: 61 ELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTFGLHPQIFCRVDDV 120
Query: 65 KFLADSETDEVYAKIKLVPIPANEI------DFEDNNLSLNSVGSDSESEKPASFAKTLT 118
+ LA+ E DEVY ++ L+P+P + + ED + G + F KTLT
Sbjct: 121 QLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCKTLT 180
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q ++AKD+HG WKFRHIYRG PRRHLL
Sbjct: 181 ASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLL 240
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+QK LV+GD+++FLR + GG+
Sbjct: 241 TTGWSIFVSQKNLVSGDAVLFLRGE----------------GGD---------------- 268
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
LR + AR N S SG+ VL AVA A S
Sbjct: 269 ----------LRLGIRRAARPRNALPESIIKSQYSGSD-----------VLSAVASAVST 307
Query: 299 K-PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K F V Y PRAS +F V +++ G RFKM F+ +DS + G ++ +
Sbjct: 308 KSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSPE-RRYSGVVTGI 366
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP WPNS WR L V WDE + + +RVSPW ++ ++P + + SP KKLR
Sbjct: 367 SDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSVSLPPLSIQS-SPRLKKLRT 425
Query: 418 PQQLDFPFDGQFT 430
QQ P D F
Sbjct: 426 SQQAQ-PVDSHFA 437
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/409 (37%), Positives = 212/409 (51%), Gaps = 64/409 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P + VFYFPQGH E S N P+ +P I CRV ++
Sbjct: 45 ELWHACAGPLVSVPQMGDKVFYFPQGHTEQVEKSTNQGADQPMPNYD-LPSKILCRVVNV 103
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA++ L+P P + + L +V S SF KTLT SD +
Sbjct: 104 WLKAEPDTDEVYAQLTLIPEPNQD----ETTLEKETVQSPPRRPHVYSFCKTLTASDTST 159
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R AE PRLD + PP Q +VAKD+HG W+FRHI+RG PRRHLLTTGWS
Sbjct: 160 HGGFSVLRRHAEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTGWSA 219
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVAGD+ +FLR ++G+L VG+RRA + N P+S +S+
Sbjct: 220 FVSSKRLVAGDAFIFLRGENGELRVGVRRA---LRQQNNMPTSVISSH------------ 264
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+M+L ++ A+ ++G F V
Sbjct: 265 ----------------SMHLG---------------------VLATAMHAFSTGTMFSVF 287
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S EF + +++ ++ GMRF+M FE E++ F GTI V+ D
Sbjct: 288 YRPRTSPSEFVIPYDQYMESVKNNYSIGMRFRMRFEGEETPEQR-FTGTIVGVEDYDSNR 346
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
WP S WR L+V WDE ++ RVSPW +E + I+ P A++
Sbjct: 347 WPASKWRCLKVQWDEQSSVERPLRVSPWKIEPSAAPTAINPPPIPRAKR 395
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/401 (37%), Positives = 213/401 (53%), Gaps = 69/401 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + VFYFPQGH E S+N + ++ +PP + CRV +++
Sbjct: 21 ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVINVE 80
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA----SFAKTLTQSD 121
A+++TDEVYA++ L+P P E N ++++ S + + P SF KTLT SD
Sbjct: 81 LKAEADTDEVYAQVMLMPEP------EQNEMAVDKSTSTTGATPPRPAVRSFCKTLTASD 134
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 135 TSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSG 194
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR + G+L VG+RRA + + PSS +S+
Sbjct: 195 WSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSN---VPSSVISSH--------- 242
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+M+L + + NT+ F
Sbjct: 243 -------------------SMHLGVLATAWHAINTKSM---------------------F 262
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + D
Sbjct: 263 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPE-QRFTGTIVGSENLD 321
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 322 QL-WPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 361
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVG 625
H D + S + T E SI+++ +S ++ Q G T C KV + +G
Sbjct: 638 AHIDCIPELSVSTAGTTENEKSIQQAPNS----SKDVQSKSHGASTRSCTKVHKQGVALG 693
Query: 626 RTLDLSVLSSYEELYRRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKS 681
R++DLS Y+EL L MF + M S ++Y D G + GD+P+ +F
Sbjct: 694 RSVDLSKFGDYDELTAELDRMFEFDGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSI 753
Query: 682 AKRLTI 687
+++ I
Sbjct: 754 VRKIFI 759
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 208/393 (52%), Gaps = 65/393 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V YFPQGH E + +F ++ +PP +FCR+ +K A+
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQA---PDFSAAIYGLPPHVFCRILDVKLHAE 108
Query: 70 SETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSESEK----PASFAKTLTQSDANN 124
+ TDEVYA++ L+P + E + + ++ D E K P F KTLT SD +
Sbjct: 109 TATDEVYAQVSLLPESEDVERKVREGVIDVDGGEEDYEVVKRTNTPHMFCKTLTASDTST 168
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDYT P Q ++A+D+HG W+FRHIYRG PRRHLLTTGWS
Sbjct: 169 HGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSA 228
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG L +G+RRA + I G + + S
Sbjct: 229 FVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQ-IEGASAFSSQ----------------- 270
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
N NMN N++ E V ++ F +
Sbjct: 271 -------------YNQNMNHNNFA---------------------EVVHAISTNSAFNIY 296
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS-RISWFMGTISSVQVADPI 363
Y P+AS F + A + + GMRFK E+ED+S R S G I+ + DPI
Sbjct: 297 YNPKASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASERRS--PGIITGINDLDPI 354
Query: 364 SWPNSPWRLLQVTWDEPDL-LQNVKRVSPWLVE 395
WP S WR L V WD+ D + +R+SPW +E
Sbjct: 355 RWPGSKWRCLLVRWDDTDANGHHQQRISPWEIE 387
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 214/401 (53%), Gaps = 68/401 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-----RIPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + + +P + CRV ++
Sbjct: 17 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSKLLCRVLNV 76
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSD 121
+ A+++TDEVYA+I L+P P E N+++ S S + +PA SF KTLT SD
Sbjct: 77 ELKAETDTDEVYAQIMLMPEP------EQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASD 130
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 131 TSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSG 190
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 191 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ--------- 238
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+M+L + + NT+ F
Sbjct: 239 -------------------SMHLGVLATAWHAINTKSM---------------------F 258
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + D
Sbjct: 259 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGCENLD 317
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
P+ WP+S WR L+V WDEP + +VSPW +E S+ PV
Sbjct: 318 PL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPV 357
Score = 43.1 bits (100), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLD 629
+V S+ G+ + + Q++ ++SS + Q G T C KV + +GR++D
Sbjct: 654 EVSVSTAGTAAENIQQV--QQSS-------KDIQSKSQGASTRSCTKVHKQGVALGRSVD 704
Query: 630 LSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRTGDEPFSDFMKSAKR 684
LS + Y EL L MF E +++S ++Y D G + GD+P+ +F ++
Sbjct: 705 LSKFTDYGELKAELDKMFEFE-GELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRK 763
Query: 685 LTI 687
+ I
Sbjct: 764 IYI 766
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/395 (38%), Positives = 213/395 (53%), Gaps = 71/395 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH----SLGSVNFPSSSRIPPLIFCRVSSLKF 66
+LWHACAG ++ +P S V Y PQGH E LG + +PP +FCRV +K
Sbjct: 49 ELWHACAGPLISLPKRGSIVVYVPQGHLEQLPDLPLGIYD------LPPHVFCRVVDVKL 102
Query: 67 LADSETDEVYAKIKLVPIPANEIDFE------DNNLSLNSVGSDSESEKPASFAKTLTQS 120
A++ +D+VYA++ LVP + EI+ + + + V + ++ P F KTLT S
Sbjct: 103 HAEAASDDVYAQVSLVP-ESEEIEQKLREGVFEGDGEEEDVEATVKTTTPHMFCKTLTAS 161
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LDYT P Q +VAKD+HG WKFRHIYRG PRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPRRHLLTT 221
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+KKLV+GD+++FLR +DG+L +G+RRA + + G +P+ WN
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQ-VKCGPTFPAL-WNQ--------- 270
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+N +S V A+++ ++
Sbjct: 271 --------------------QLNQSSLAD------------------VANAISMRSA--- 289
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PRAS+ EF + + ++ + GMR KM FETED++ + G I+ +
Sbjct: 290 FRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAERR-YTGLITGISEL 348
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP WP S W+ L V WD+ + ++ RVSPW VE
Sbjct: 349 DPTRWPGSKWKCLLVRWDDTEANRH-SRVSPWEVE 382
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 214/401 (53%), Gaps = 68/401 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-----RIPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + + +P + CRV ++
Sbjct: 22 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSKLLCRVLNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSD 121
+ A+++TDEVYA+I L+P P E N+++ S S + +PA SF KTLT SD
Sbjct: 82 ELKAETDTDEVYAQIMLMPEP------EQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASD 135
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 136 TSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSG 195
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 196 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ--------- 243
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+M+L + + NT+ F
Sbjct: 244 -------------------SMHLGVLATAWHAINTKSM---------------------F 263
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + D
Sbjct: 264 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPE-QRFTGTIVGCENLD 322
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
P+ WP+S WR L+V WDEP + +VSPW +E S+ PV
Sbjct: 323 PL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPV 362
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 214/401 (53%), Gaps = 68/401 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-----RIPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + + +P + CRV ++
Sbjct: 22 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSKLLCRVLNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSD 121
+ A+++TDEVYA+I L+P P E N+++ S S + +PA SF KTLT SD
Sbjct: 82 ELKAETDTDEVYAQIMLMPEP------EQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASD 135
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 136 TSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSG 195
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 196 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ--------- 243
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+M+L + + NT+ F
Sbjct: 244 -------------------SMHLGVLATAWHAINTKSM---------------------F 263
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + D
Sbjct: 264 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGCENLD 322
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
P+ WP+S WR L+V WDEP + +VSPW +E S+ PV
Sbjct: 323 PL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPV 362
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLD 629
+V S+ G+ + + Q++ ++SS + Q G T C KV + +GR++D
Sbjct: 659 EVSVSTAGTAAENIQQV--QQSS-------KDIQSKSQGASTRSCTKVHKQGVALGRSVD 709
Query: 630 LSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRTGDEPFSDFMKSAKR 684
LS + Y EL L MF E +++S ++Y D G + GD+P+ +F ++
Sbjct: 710 LSKFTDYGELKAELDKMFEFE-GELVSANRNWQIVYTDNEGDMMLVGDDPWEEFCNIVRK 768
Query: 685 LTI 687
+ I
Sbjct: 769 IYI 771
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 214/401 (53%), Gaps = 68/401 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-----RIPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + + +P + CRV ++
Sbjct: 22 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRLYDLPSKLLCRVLNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSD 121
+ A+++TDEVYA+I L+P P E N+++ S S + +PA SF KTLT SD
Sbjct: 82 ELKAETDTDEVYAQIMLMPEP------EQNDVAAEKTSSGSAAPPRPAVRSFCKTLTASD 135
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 136 TSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSG 195
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 196 WSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ--------- 243
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+M+L + + NT+ F
Sbjct: 244 -------------------SMHLGVLATAWHAINTKSM---------------------F 263
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + D
Sbjct: 264 TVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPE-QRFTGTIVGCENLD 322
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
P+ WP+S WR L+V WDEP + +VSPW +E S+ PV
Sbjct: 323 PL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPASSPPV 362
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLDLS 631
+ S +G+ E +++SS + Q G T C KV + +GR++DLS
Sbjct: 659 EVSVSTAGTAAENIQQVQQSS-------KDIQSKSQGASTRSCTKVHKQGVALGRSVDLS 711
Query: 632 VLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRTGDEPFSDFMKSAKRLT 686
+ Y EL L MF E +++S ++Y D G + GD+P+ + S +
Sbjct: 712 KFTDYGELKAELDKMFEFE-GELVSANRNWQIVYTDNEGDMMLVGDDPWDPLLTSREFCN 770
Query: 687 IL 688
I+
Sbjct: 771 IV 772
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 218/701 (31%), Positives = 318/701 (45%), Gaps = 122/701 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S N + +P I C V +++
Sbjct: 24 ELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVE 83
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P E D + SL+ D E SF KTLT SD +
Sbjct: 84 LRAEADSDEVYAQIMLQP----EAD-QSELTSLDPELQDLEKCTAHSFCKTLTASDTSTH 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 139 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR + G+L VG+RR + + N PSS +S+
Sbjct: 199 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQV---NNMPSSVISSH------------- 242
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+M+L ++ A ++G F V Y
Sbjct: 243 ---------------SMHLG---------------------VLATASHAISTGTLFSVFY 266
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVADPI 363
PR S EF V + A + + GMRFKM FE +++ R S + I SV
Sbjct: 267 KPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKS 326
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPAR-KKLRLPQQL 421
W +S W+ L+V WDEP + RVSPW +E L ++ P P P R K+ R P
Sbjct: 327 PWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNP---QPPQPPLRNKRARPPASP 383
Query: 422 DF-----PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNK 476
P G + P + L S P Q AR I +S F ++
Sbjct: 384 SVVAELPPSFGLWKPPSEAAQTLSFSEP------------QRAREIFPSIPASIFSASSH 431
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTS--HTNSSENLSCLLTMGNSNQNLEKSENIKKHQF 534
++ NS++ IL++ + + ++ + + + +E+ +
Sbjct: 432 VEF------------NSKNEPSILSNQFYWSMRDSKTDSFSASTNKTRVERKQEPTTMGC 479
Query: 535 LLFGQPIRTEQQISHSCSDDVVSQVLGKS---SSDGHSDKVKASSDGSGSTHEQRISIEK 591
LFG I + + VS V S D SD++ S+G+ S
Sbjct: 480 RLFG--IEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSD-------AP 530
Query: 592 SSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIER 651
+SSE RS ++S KV ++ VGR +DL+ L+ Y +L +L MF I+
Sbjct: 531 GTSSE----RSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQ- 585
Query: 652 SDMLS-----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
D+ V+Y D + GD+P+ +F KR+ I
Sbjct: 586 GDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYI 626
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 218/701 (31%), Positives = 318/701 (45%), Gaps = 122/701 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S N + +P I C V +++
Sbjct: 20 ELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P E D + SL+ D E SF KTLT SD +
Sbjct: 80 LRAEADSDEVYAQIMLQP----EAD-QSELTSLDPELQDLEKCTAHSFCKTLTASDTSTH 134
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 194
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR + G+L VG+RR + + N PSS +S+
Sbjct: 195 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQV---NNMPSSVISSH------------- 238
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+M+L + + + +T G F V Y
Sbjct: 239 ---------------SMHLGVLATASHAIST---------------------GTLFSVFY 262
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVADPI 363
PR S EF V + A + + GMRFKM FE +++ R S + I SV
Sbjct: 263 KPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKS 322
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPAR-KKLRLPQQL 421
W +S W+ L+V WDEP + RVSPW +E L ++ P P P R K+ R P
Sbjct: 323 PWADSDWKSLKVQWDEPSAIVRPDRVSPWELEPLDASNP---QPPQPPLRNKRARPPASP 379
Query: 422 DF-----PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNK 476
P G + P + L S P Q AR I +S F ++
Sbjct: 380 SVVAELPPSFGLWKPPSEAAQTLSFSEP------------QRAREIFPSIPASIFSASSH 427
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTS--HTNSSENLSCLLTMGNSNQNLEKSENIKKHQF 534
++ NS++ IL++ + + ++ + + + +E+ +
Sbjct: 428 VEF------------NSKNEPSILSNQFYWSMRDSKTDSFSASTNKTRVERKQEPTTMGC 475
Query: 535 LLFGQPIRTEQQISHSCSDDVVSQVLGKS---SSDGHSDKVKASSDGSGSTHEQRISIEK 591
LFG I + + VS V S D SD++ S+G+ S
Sbjct: 476 RLFG--IEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSD-------AP 526
Query: 592 SSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIER 651
+SSE RS ++S KV ++ VGR +DL+ L+ Y +L +L MF I+
Sbjct: 527 GTSSE----RSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQ- 581
Query: 652 SDMLS-----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
D+ V+Y D + GD+P+ +F KR+ I
Sbjct: 582 GDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYI 622
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 148/398 (37%), Positives = 208/398 (52%), Gaps = 62/398 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLI 57
+ E ++ +LWHACAG +V +P VFYFPQGH E S N + ++P P I
Sbjct: 47 DAETALYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNLLPKI 106
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
CRV +++ A+ +TDEV+A++ L+P E + +++ L SF KTL
Sbjct: 107 LCRVVNVQLKAEPDTDEVFAQVTLLP----EHNQDESVLEKEPPPPPPPRFHVHSFCKTL 162
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHL
Sbjct: 163 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHL 222
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
L +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 223 LQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH----- 274
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
+M+L ++ A ++
Sbjct: 275 -----------------------SMHLG---------------------VLATAWHAVST 290
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI +
Sbjct: 291 GTLFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGI 349
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ ADP W NS WR L+V WDE + +RVSPW +E
Sbjct: 350 EDADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIE 387
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 161/445 (36%), Positives = 215/445 (48%), Gaps = 72/445 (16%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSS-SRIPPLIFCRV 61
E ++ +LWHACAG V +P S V Y PQ H G P+ + +PP + CRV
Sbjct: 13 ETAGAVCGELWHACAGPGVALPRRGSAVVYLPQAHLAAGGGDAPAPAGRAHVPPHVACRV 72
Query: 62 SSLKFLADSETDEVYAKIKLVPIP------ANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
++ AD+ TDEVYA++ LV E E+ + + +++ P F K
Sbjct: 73 VGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEEGEDEMAAGDGENKPRMPHMFCK 132
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE F LDY P Q +VAKD+HG W+FRHIYRG PRR
Sbjct: 133 TLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFRHIYRGQPRR 192
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS+FVN+KKLV+GD+++FLR DG+L +G+RRA +
Sbjct: 193 HLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQ------------------- 233
Query: 236 CVTGNPFGGFSCFLREEENKMARNGN-MNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
LR E A N N L++ + SS R
Sbjct: 234 -------------LRNEALFEAVNTNDSKLHTLSAVASSLENR----------------- 263
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
F V + PR+ EF V ++ + GMRFK++ E++D++ S G I
Sbjct: 264 ----SIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSIGMRFKVSNESDDANERS--TGLI 317
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH--LSPFSPAR 412
S + DPI WP S WR L V WD+ + +RVSPW +E V + LS S R
Sbjct: 318 SGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIERVGGSISVTDCLSASSSKR 377
Query: 413 KKLRLPQQLDFPFDGQFTMPLFSGN 437
KL PQ G P+ GN
Sbjct: 378 AKLYFPQ-------GNLDAPVTDGN 395
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 210/399 (52%), Gaps = 65/399 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + VFYFPQGH E S+N + S+ +P + CRV +++
Sbjct: 7 ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVE 66
Query: 66 FLADSETDEVYAKIKLVPIPA-NEIDFEDNNLSLNSVGSDSESEKPA-SFAKTLTQSDAN 123
A+ +TDEVYA++ L+P P NE+ E + V ++ P SF KTLT SD +
Sbjct: 67 LKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPV----QARPPVRSFCKTLTASDTS 122
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VAKD+H W+FRHI+RG PRRHLL +GWS
Sbjct: 123 THGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWS 182
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 183 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ----------- 228
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L + + NT+ F V
Sbjct: 229 -----------------SMHLGVLATAWHAINTKSM---------------------FTV 250
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP+
Sbjct: 251 YYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR-FTGTIIGSENLDPV 309
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 310 -WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 347
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLD 629
+V S+ G+ + +E+ + SS + Q T C KV + +GR++D
Sbjct: 639 EVSVSTAGTATENEKSGQQAQQSS------KDVQSKTQVASTRSCTKVHKQGVALGRSVD 692
Query: 630 LSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRL 685
LS S+Y+EL L MF + S+ ++Y D G + GD+P+ +F +++
Sbjct: 693 LSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKI 752
Query: 686 TI 687
I
Sbjct: 753 YI 754
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 151/399 (37%), Positives = 210/399 (52%), Gaps = 65/399 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + VFYFPQGH E S+N + S+ +P + CRV +++
Sbjct: 19 ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVE 78
Query: 66 FLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPA-SFAKTLTQSDAN 123
A+ +TDEVYA++ L+P P NE+ E + V ++ P SF KTLT SD +
Sbjct: 79 LKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPV----QARPPVRSFCKTLTASDTS 134
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VAKD+H W+FRHI+RG PRRHLL +GWS
Sbjct: 135 THGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWS 194
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + SN S V
Sbjct: 195 VFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQL------------SNVPSSVIS---- 238
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+ +M+L + + NT+ F V
Sbjct: 239 ---------------SQSMHLGVLATAWHAINTKSM---------------------FTV 262
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP+
Sbjct: 263 YYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR-FTGTIIGSENLDPV 321
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 322 -WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 359
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 571 KVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLD 629
+V S+ G+ + +E+ + SS + Q T C KV + +GR++D
Sbjct: 651 EVSVSTAGTATENEKSGQQAQQSS------KDVQSKTQVASTRSCTKVHKQGVALGRSVD 704
Query: 630 LSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRL 685
LS S+Y+EL L MF + S+ ++Y D G + GD+P+ +F +++
Sbjct: 705 LSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKI 764
Query: 686 TI 687
I
Sbjct: 765 YI 766
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 218/696 (31%), Positives = 306/696 (43%), Gaps = 126/696 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
+LWHACAG ++ +P V+YFPQGH E S N + +P I C V +++
Sbjct: 74 ELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMFNLPSKILCSVVNVE 133
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
++++DEVYA+I L P +D L S G E E+ SF KTLT SD +
Sbjct: 134 LRTEADSDEVYAQIMLQP--------QDEQSELTSAGPPQELERGTIHSFCKTLTASDTS 185
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 186 THGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQPRRHLLTTGWS 245
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LVAGD+ +FLR +G+L VG+RR + + N PSS +S+
Sbjct: 246 VFVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQV---NNMPSSVISSH----------- 291
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L + + + +T G F V
Sbjct: 292 -----------------SMHLGVLATASHAIST---------------------GTLFSV 313
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVAD 361
Y PR S EF V + A + + GMRFKM FE +++ R S + + S
Sbjct: 314 FYKPRTSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEALERRFSGTIVGMGSTPTMP 373
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPAR-KKLRLPQ 419
W +S W+ L+V WDEP + RVS W +E L S P P R + L P
Sbjct: 374 SSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANPQTPEPPLRNKRARALASPS 433
Query: 420 QL-DFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQ 478
+ D P P F G PS P LS + A+ +S F N +
Sbjct: 434 VVPDLP-------PNF-GLWKSPSEPSQTLS------FSEPQRARELFPTSIFSSTNVMF 479
Query: 479 SGLFLSSLQRFTPNSRDFDGILTSHTN--SSENLSCLLTMGNSNQ-NLEKSENIKKHQFL 535
Q + P DG + TN ++E T G +E S +++
Sbjct: 480 D-------QFYWPGRETKDGSYAASTNKVTAERKHEPTTTGGCRLFGIEISSTVEE---- 528
Query: 536 LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSS 595
QP+ T +S G D+ AS D S Q +I S +
Sbjct: 529 --TQPVVT--------------------ASVGDHDQTAASVDMDSSVLSQPSNINNSDAP 566
Query: 596 EFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERSD 653
R+ T+S KV ++ VGR +DL+ L Y +L+R+L MF I E
Sbjct: 567 AGSSERALLETQSRQVRSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEMFDIHGELCS 626
Query: 654 MLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L V+Y D + GD+P+ +F KR+ I
Sbjct: 627 TLKRWQVVYADDEDDMMLVGDDPWDEFCGMVKRIYI 662
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 159/424 (37%), Positives = 226/424 (53%), Gaps = 65/424 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +PP+ S V YFPQGH+E S N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ E + L + S++P + F KTL
Sbjct: 78 CQLHNVTMHADAETDEVYAQMTLQPLSPQE----QKEVYLLPAELGTPSKQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTIMPSSVLSSDSMHI- 249
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P A+ LA
Sbjct: 250 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEF--AIPLA-- 283
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K + VY+ R V MR F+M FETE+SS + +MGTI+ +
Sbjct: 284 -KYVKAVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGI 321
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 322 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPW 379
Query: 418 PQQL 421
P L
Sbjct: 380 PSGL 383
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 598 FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE------- 650
F S V ++ + TG +S GR+LD+S SSY+EL LA MFG+E
Sbjct: 745 FLQCSENVDQANIPTGTFVKVHKSGSFGRSLDISKFSSYDELISELARMFGLEGQLEDPK 804
Query: 651 --RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPK 708
RS +++ D + GD+P+ +F+ + + IL +G+ P
Sbjct: 805 TQRSGW--QLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGKVLSPSTSAPG 862
Query: 709 NGL 711
+ L
Sbjct: 863 DKL 865
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 222/418 (53%), Gaps = 70/418 (16%)
Query: 10 PQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSL 64
P+LW ACAG +V +P + VFYFPQGH E S+N + ++ +P + CRV ++
Sbjct: 23 PELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPSKLLCRVLNV 82
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
+ A+++TDEVYA+I L+P P + + + + + + S +PA SF KTLT SD
Sbjct: 83 ELKAETDTDEVYAQIMLMPEPE-----QTDVAAEKASSASAASPRPAVRSFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +GW
Sbjct: 138 STHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + PSS +S
Sbjct: 198 SVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSN---VPSSVISSQ---------- 244
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M+L + + NT+ F
Sbjct: 245 ------------------SMHLGVLATAWHAINTKSM---------------------FT 265
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP
Sbjct: 266 VYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPE-QRFTGTIVGCENLDP 324
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
+ WP+S WR L+V WDEP + RVSPW +E S+ PV L P +++ P+Q
Sbjct: 325 L-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPL----PLSSRVKRPRQ 377
>gi|284811261|gb|ADB96369.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 283
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/322 (50%), Positives = 197/322 (61%), Gaps = 61/322 (18%)
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+P
Sbjct: 1 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIP 59
Query: 419 QQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG----- 465
Q +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 60 QPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPS 117
Query: 466 ----ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
++ S + NNKL S +FLSS F P + + +S N+SC LTMGN
Sbjct: 118 LLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNPA 171
Query: 521 QNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSD 577
+K + ++K HQF+LFGQPI TEQQ+ + + L + + + A
Sbjct: 172 MVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGLVARG- 224
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
WN S Q GL+TGHCKVF+ESEDVGRTLDLSV+ SY+
Sbjct: 225 -------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSVIGSYQ 261
Query: 638 ELYRRLAIMFGI-ERSDMLSHV 658
ELYR+LA MF I ERSD+L+HV
Sbjct: 262 ELYRKLAEMFHIEERSDLLTHV 283
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 156/423 (36%), Positives = 214/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+ +DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 43 AERVVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 102
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P I CRV ++ A+++TDEVYA+I L+P P + +N++ + + S
Sbjct: 103 LPSKILCRVINVDLKAEADTDEVYAQITLLPEPVQD----ENSIEKEAPPPPPPRFQVHS 158
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 159 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQ 218
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 219 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 275
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 276 ----------------------------SMHLG----------------------VLATA 285
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V ++++++ GMRFKM FE E++ F
Sbjct: 286 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPE-QRFT 344
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP W S WR L+V WDE + RVSPW +E + P LSP
Sbjct: 345 GTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPA--LSPVPMP 402
Query: 412 RKK 414
R K
Sbjct: 403 RPK 405
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 214/420 (50%), Gaps = 63/420 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----- 56
K+ E ++ +LWHACAG +V +P VFYFPQGH E S N S ++P
Sbjct: 51 KDFETALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSK 110
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV +++ A+ +TDEV+A++ L+P P + ++ SF KT
Sbjct: 111 ILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPP----PPRFHVHSFCKT 166
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P+LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 167 LTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 226
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 227 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH---- 279
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 280 ------------------------SMHLG---------------------VLATAWHAKS 294
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 295 TGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVG 353
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
++ ADP W +S WR L+V WDE + RVSPW +E P ++ P P K+ R
Sbjct: 354 IEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVTPPALNPLPV-PRPKRPR 412
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 525 KSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHE 584
K N K L G P+ +E +S+ + + L + S SD+ S G+ ST +
Sbjct: 646 KDGNCKLFGIPLIGNPVISEPAMSYRSMTNEPAGHLHLAPSAFDSDQKSEQSKGAKST-D 704
Query: 585 QRISI---EKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYEELY 640
+++ EK + +R Q + T C KV + +GR++DL+ ++Y+EL
Sbjct: 705 NPLAVSEQEKPCQTSLPLSRDVQGKVQSVSTRSCTKVHKQGIALGRSVDLTKFNNYDELI 764
Query: 641 RRLAIMFGIERSDMLSH----VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L +F M ++Y D G + GD+P+ +F +++ I
Sbjct: 765 AELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIYI 815
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 169/473 (35%), Positives = 232/473 (49%), Gaps = 77/473 (16%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH E S N P+ +PP
Sbjct: 22 EEHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQ 81
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ E+ L + S +P + F K
Sbjct: 82 LICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTA-----SNQPTNYFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+ PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 197 HLLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQL 228
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
+ R N S S ++ G ++ A A
Sbjct: 229 LLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAA 264
Query: 296 ASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI
Sbjct: 265 STNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTI 323
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF+ K+
Sbjct: 324 TGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP-MYPSPFALGLKR 382
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
P P L+ G G +S L L D + G Q + G+S
Sbjct: 383 ---PWPAGLPS-------LYGGRGDGLTSSLMWLRDRANPGFQSLNFSGLGMS 425
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRT 670
KV+ +S VGR LD++ SSY+EL + +FG+E D L +++ D +
Sbjct: 786 KVY-KSGTVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 844
Query: 671 GDEPFSDFMKSAKRLTILMGSGSDSVGRTWI 701
GD+P+ +F+ S + IL +G+ I
Sbjct: 845 GDDPWQEFVNSVSCIKILSPEEVQRMGKPGI 875
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 221/406 (54%), Gaps = 65/406 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 2 KKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLI 61
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ ++ D +D L +G+ S++P + F KTL
Sbjct: 62 CQLHNVTMHADVETDEVYAQMTLQPL--SQDDQKDAYLLPAELGT--ASKQPTNYFCKTL 117
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 118 TASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHL 177
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 178 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTFMPSSVLSSDSMHI- 233
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP-EMVLEAVALAA 296
G + ++ + +S T R P E V+ V
Sbjct: 234 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLV---- 267
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
K + VY+ R S GMRF+M FETE+SS + +MGTI+
Sbjct: 268 --KYIKAVYHTRVS--------------------VGMRFRMLFETEESS-VRRYMGTITG 304
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 305 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 350
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 253 bits (645), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 167/472 (35%), Positives = 232/472 (49%), Gaps = 75/472 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH E S N P+ +PP
Sbjct: 13 EEHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQ 72
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
+ C++ ++ AD+ETDEVYA++ L P+ E+ + L + + ++ F KT
Sbjct: 73 LICQLHNVTMHADAETDEVYAQMTLQPLSPQEL----KDPFLPAELGTASNQPTNYFCKT 128
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP LD+ PP Q ++AKD+HG WKFRHI+RG P+RH
Sbjct: 129 LTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRH 188
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 189 LLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQLL 220
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+ R N S S ++ G ++ A A+
Sbjct: 221 LG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAAS 256
Query: 297 SGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
+ F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+
Sbjct: 257 TNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTIT 315
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
+ DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF+ K+
Sbjct: 316 GISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP-MYPSPFALGLKR- 373
Query: 416 RLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
P P L+ G G +S L L D + G Q + G+S
Sbjct: 374 --PWPAGLPS-------LYGGRGDGLTSSLMWLRDRANPGFQSLNFSGLGMS 416
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRT 670
KV+ +S VGR LD++ SSY+EL + +FG+E D L +++ D +
Sbjct: 777 KVY-KSGTVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 835
Query: 671 GDEPFSDFMKSAKRLTILMGSGSDSVGRTWI 701
GD+P+ +F+ S + IL +G+ I
Sbjct: 836 GDDPWQEFVNSVSCIKILSPEEVQRMGKPGI 866
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/417 (38%), Positives = 206/417 (49%), Gaps = 72/417 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E V++ S IP P IFCRV ++
Sbjct: 60 ELWHACAGPLTCLPKKGNVVVYFPQGHLEQD-AMVSYSSPLEIPKFDLNPQIFCRVVHVQ 118
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-------SEKPASFAKTLT 118
LA+ ETDEVY ++ L+P+ + + +G D E P F KTLT
Sbjct: 119 LLANKETDEVYTQVTLLPLQEFSM-LNTEGKEVKELGGDEERNVSSSVKRTPHMFCKTLT 177
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE F LDY P Q ++AKD+HG WKFRHIYRG PRRHLL
Sbjct: 178 ASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLL 237
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+QK L +GD+++FLR + G+L +GIRRA
Sbjct: 238 TTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRA------------------------ 273
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
AR N +S NS N +L +A A S
Sbjct: 274 ------------------ARPRNGLPDSIIEKNSCSN------------ILSLLANAVST 303
Query: 299 KP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K F V Y PRA+ EF + ++R G RF+M FE +DS G ++ V
Sbjct: 304 KSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMDDSPE-RRCAGVVTGV 362
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
DP WPNS WR L V WDE + + +RVSPW ++ ++P HLS S R K
Sbjct: 363 CDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSISLP--HLSIQSSPRPK 417
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y++L L +F +E + +LY D+ + G
Sbjct: 672 KVHKQGSQVGRAIDLSRLNGYDDLLTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVG 731
Query: 672 DEPFSDF 678
D+P+ DF
Sbjct: 732 DDPWHDF 738
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/406 (37%), Positives = 210/406 (51%), Gaps = 65/406 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +PPL S V YFPQGH+E S N PS +P +
Sbjct: 19 KKCLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYPGLPAQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ A E ++ L S++P + F KTL
Sbjct: 79 CQLHNVTMHADNETDEVYAQMTLQPLSAQE----QKDVCLLPAELGMPSKQPTNYFCKTL 134
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++AKD+HG WKFRH++RG P+RHL
Sbjct: 135 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHL 194
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVA GD + I WN NN +
Sbjct: 195 LTTGWSVFVSAKRLVA-----------GDAVIFI-----------------WNENNQLLL 226
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R N S S ++ G ++ A AA+
Sbjct: 227 G------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAAAT 262
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PRAS +F + A KA GMRF+M FETE+SS + +MGTI+
Sbjct: 263 NSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITG 321
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 367
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ +SSY EL + LA MFGIE RS +++ D +
Sbjct: 715 IKVY-KSGYVGRSLDITRISSYHELRQELAQMFGIEGLLEDPQRSGW--QLVFVDRENDV 771
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNKTG 718
GD+P+ F+ + + IL +G+ + +N ++ N +G
Sbjct: 772 LLLGDDPWEAFVNNVWYIKILSPEDVQKLGKQEAKSLS--RNTMERMNGSG 820
>gi|284811259|gb|ADB96368.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 282
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 161/321 (50%), Positives = 194/321 (60%), Gaps = 60/321 (18%)
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
VADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+P
Sbjct: 1 VADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIP 59
Query: 419 QQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG----- 465
Q +FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 60 QPFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPS 117
Query: 466 ---ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ 521
+ + NKL S +FLSS F P + + +S N+SC LTMGN
Sbjct: 118 LLSDLNLSSYTGNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNPAM 171
Query: 522 NLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
+K + ++K HQF+LFGQPI TEQQ+ + + L + + + A
Sbjct: 172 VQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGLVARG-- 223
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
WN S Q GL+TGHCKVF+ESEDVGRTLDLSV+ SY+E
Sbjct: 224 ------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSVIGSYQE 261
Query: 639 LYRRLAIMFGI-ERSDMLSHV 658
LYR+LA MF I ERSD+L+HV
Sbjct: 262 LYRKLAEMFHIEERSDLLTHV 282
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 252 bits (643), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 168/473 (35%), Positives = 231/473 (48%), Gaps = 77/473 (16%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH E S N P+ +PP
Sbjct: 22 EEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQ 81
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ E+ L + S++P + F K
Sbjct: 82 LICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLPAELGTA-----SKQPTNYFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+ PP Q ++A D+HG WKFRHI+RG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 197 HLLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQL 228
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
+ R N S S ++ G ++ A A
Sbjct: 229 LLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAA 264
Query: 296 ASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI
Sbjct: 265 STNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTI 323
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF+ K+
Sbjct: 324 TGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP-MYPSPFALGLKR 382
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
P P L+ G G +S L L D + G Q + G S
Sbjct: 383 ---PWPTGLP-------SLYGGRDDGLTSSLMWLRDRANPGFQSLNFSGLGTS 425
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 11/108 (10%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRT 670
KV+ +S +VGR LD++ SSY+EL + +FG+E D L +++ D +
Sbjct: 783 KVY-KSGNVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 841
Query: 671 GDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGM-----RTPKNGLDA 713
GD+P+ +F+ S + IL +G+ I + R NG D+
Sbjct: 842 GDDPWQEFVNSVSCIKILSPEEVQQMGKPGIQLLSSAPSRRLSNGCDS 889
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 204/391 (52%), Gaps = 62/391 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V YFPQGH E + +F ++ +PP +FCR+ +K A+
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQA---PDFSAAIYGLPPHVFCRILDVKLHAE 110
Query: 70 SETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSE----SEKPASFAKTLTQSDANN 124
+ TDEVYA++ L+P + E + + ++ D E S P F KTLT SD +
Sbjct: 111 TTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTST 170
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDY+ P Q ++A+D+HG W+FRHIYRG PRRHLLTTGWS
Sbjct: 171 HGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSA 230
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG L +G+RRA + G
Sbjct: 231 FVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEG------------------------- 265
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+ L + N+ NMN N++ E ++ F +
Sbjct: 266 -TAALSAQYNQ-----NMNHNNFS---------------------EVAHAISTHSVFSIS 298
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y P+AS F + A + + GMRFK E+ED+S G IS + DPI
Sbjct: 299 YNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASE-RRSPGIISGISDLDPIR 357
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
WP S WR L V WD+ + +RVSPW +E
Sbjct: 358 WPGSKWRCLLVRWDDIVANGHQQRVSPWEIE 388
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 214/420 (50%), Gaps = 63/420 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----- 56
K+ E ++ +LWHACAG +V +P VFYFPQGH E S N S ++P
Sbjct: 51 KDFETALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSK 110
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV +++ A+ +TDEV+A++ L+P P + ++ SF KT
Sbjct: 111 ILCRVINVQLKAEPDTDEVFAQVTLLPEPNQDETAQEKEPLPPP----PPRFHVHSFCKT 166
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P+LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 167 LTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 226
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 227 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH---- 279
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 280 ------------------------SMHLG---------------------VLATAWHAKS 294
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 295 TGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVG 353
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
++ ADP W +S WR L+V WDE + RVSPW +E P ++ P P K+ R
Sbjct: 354 IEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVTPPALNPLPV-PRPKRPR 412
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 214/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P E + ++N + + + S
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLP----EANQDENAIEKEAPLPPPPRFQVHS 163
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 280
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 281 ----------------------------SMHLG----------------------VLATA 290
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP WP S WR L+V WDE + RVSPW VE P LSP
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMP 407
Query: 412 RKK 414
R K
Sbjct: 408 RPK 410
>gi|284811267|gb|ADB96372.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 282
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 162/321 (50%), Positives = 196/321 (61%), Gaps = 61/321 (19%)
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
ADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+PQ
Sbjct: 1 ADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQ 59
Query: 420 QLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG------ 465
+FPFDG +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 60 PFEFPFDGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPSL 117
Query: 466 ---ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ 521
++ S + NNKL S +FLSS F P + + +S N+SC LTMGN
Sbjct: 118 LSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNPAM 171
Query: 522 NLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
+K + ++K HQF+LFGQPI TEQQ+ + + L + + + A
Sbjct: 172 VQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGLVARG-- 223
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
WN S Q GL+TGHCKVF+ESEDVGRTLDLSV+ SY+E
Sbjct: 224 ------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSVIGSYQE 261
Query: 639 LYRRLAIMFGI-ERSDMLSHV 658
LYR+LA MF I ERSD+L+HV
Sbjct: 262 LYRKLAEMFHIEERSDLLTHV 282
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 214/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P E + ++N + + + S
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLP----EANQDENAIEKEAPLPPPPRFQVHS 163
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 280
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 281 ----------------------------SMHLG----------------------VLATA 290
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP WP S WR L+V WDE + RVSPW VE P LSP
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMP 407
Query: 412 RKK 414
R K
Sbjct: 408 RPK 410
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 214/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P E + ++N + + + S
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLP----EANQDENAIEKEAPLPPPPRFQVHS 163
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 280
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 281 ----------------------------SMHLG----------------------VLATA 290
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP WP S WR L+V WDE + RVSPW VE P LSP
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMP 407
Query: 412 RKK 414
R K
Sbjct: 408 RPK 410
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 170/477 (35%), Positives = 246/477 (51%), Gaps = 81/477 (16%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+ E +K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +P
Sbjct: 20 VAEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLP 79
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-F 113
P + C++ ++ AD+ETDEVYA++ L P+ E+ +D L +G+ S++P + F
Sbjct: 80 PQLICQLHNVTMHADAETDEVYAQMTLQPLSPQEL--KDPFLPAE-LGT--ASKQPTNYF 134
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P
Sbjct: 135 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQP 194
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
+RHLLTTGWS FV+ K+LVAGDS++F+ L +GIRRA + PSS +S+
Sbjct: 195 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANR---PQTVMPSSVLSSD- 250
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGN---GGRVKPEMVLE 290
+ ++ L + + +S N+R R P +
Sbjct: 251 -------------------------SMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVI 285
Query: 291 AVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
+A K + VY+ R + MR F+M FETE+SS + +
Sbjct: 286 PLA-----KYVKAVYHTR------------ISVGMR--------FRMLFETEESS-VRRY 319
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
MGTI+ + DP+ W NS WR ++V WDE + RVS W +E ++ P ++ SPF P
Sbjct: 320 MGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-P 377
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
R K P L L+ G +S L L D+ + G Q G+S
Sbjct: 378 LRLKRPWPTGLPS---------LYGGKEDDLASSLMWLRDSQNTGFQSLNFGGLGMS 425
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S VGR LD++ SSY EL + +FG+E D L +++ D +
Sbjct: 780 VKVY-KSGTVGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 838
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGRTWI 701
GD+P+ +F+ S + IL +G+ I
Sbjct: 839 VGDDPWQEFVNSVSCIKILSPQEVQQMGKPGI 870
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 150/420 (35%), Positives = 213/420 (50%), Gaps = 63/420 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PL 56
+E E ++ +LWHACAG +V +P VFYFPQGH E S N S +P P
Sbjct: 38 REAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPK 97
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV ++ A+ +TDEV+A++ LVP P + ++N + + + SF KT
Sbjct: 98 ILCRVINVMLKAEPDTDEVFAQVTLVPEP----NQDENAVEKEAPPAPPPRFHVHSFCKT 153
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 154 LTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 213
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 214 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV---RRAMRQQGNVPSSVISSHS--- 267
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
M+L ++ A
Sbjct: 268 -------------------------MHLG---------------------VLATAWHAVL 281
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 282 TGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE-QRFTGTIVG 340
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
++ +D WP S WR L+V WDE + +RVSPW +E P ++ P P K+ R
Sbjct: 341 IEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPM-PRPKRPR 399
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 214/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P E + ++N + + + S
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLP----EANQDENAIEKEAPLPPPPRFQVHS 163
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 280
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 281 ----------------------------SMHLG----------------------VLATA 290
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP WP S WR L+V WDE + RVSPW VE P LSP
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMP 407
Query: 412 RKK 414
R K
Sbjct: 408 RPK 410
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 204/391 (52%), Gaps = 62/391 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V YFPQGH E + +F ++ +PP +FCR+ +K A+
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQA---PDFSAAIYGLPPHVFCRILDVKLHAE 110
Query: 70 SETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSE----SEKPASFAKTLTQSDANN 124
+ TDEVYA++ L+P + E + + ++ D E S P F KTLT SD +
Sbjct: 111 TTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTST 170
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDY+ P Q ++A+D+HG W+FRHIYRG PRRHLLTTGWS
Sbjct: 171 HGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSA 230
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG L +G+RRA + G
Sbjct: 231 FVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEG------------------------- 265
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+ L + N+ NMN N++ E ++ F +
Sbjct: 266 -TAALSAQYNQ-----NMNHNNFS---------------------EVAHAISTHSVFSIS 298
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y P+AS F + A + + GMRFK E+ED+S G IS + DPI
Sbjct: 299 YNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASE-RRSPGIISGISDLDPIR 357
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
WP S WR L V WD+ + +RVSPW +E
Sbjct: 358 WPGSKWRCLLVRWDDIVANGHQQRVSPWEIE 388
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/391 (37%), Positives = 204/391 (52%), Gaps = 62/391 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V YFPQGH E + +F ++ +PP +FCR+ +K A+
Sbjct: 54 ELWHACAGPLISLPKRGSLVLYFPQGHLEQA---PDFSAAIYGLPPHVFCRILDVKLHAE 110
Query: 70 SETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSE----SEKPASFAKTLTQSDANN 124
+ TDEVYA++ L+P + E + + ++ D E S P F KTLT SD +
Sbjct: 111 TTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTST 170
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDY+ P Q ++A+D+HG W+FRHIYRG PRRHLLTTGWS
Sbjct: 171 HGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSA 230
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG L +G+RRA + G
Sbjct: 231 FVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEG------------------------- 265
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+ L + N+ NMN N++ E ++ F +
Sbjct: 266 -TAALSAQYNQ-----NMNHNNFS---------------------EVAHAISTHSVFSIS 298
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y P+AS F + A + + GMRFK E+ED+S G IS + DPI
Sbjct: 299 YNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASE-RRSPGIISGISDLDPIR 357
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
WP S WR L V WD+ + +RVSPW +E
Sbjct: 358 WPGSKWRCLLVRWDDIVANGHQQRVSPWEIE 388
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 251 bits (641), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 212/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDP------QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+ +DP +LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 44 AERVVDPDAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 103
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P I CRV ++ A+++TDEVYA+I L+P P + +N + S + S
Sbjct: 104 LPSKILCRVINVDLKAEADTDEVYAQITLLPEPVQD----ENAIEKESPPPPPPRFQVHS 159
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 160 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQ 219
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 220 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 276
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 277 ----------------------------SMHLG----------------------VLATA 286
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 287 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 345
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP W S WR L+V WDE + RVSPW +E + P LSP
Sbjct: 346 GTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPA--LSPVPMP 403
Query: 412 RKK 414
R K
Sbjct: 404 RPK 406
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/418 (36%), Positives = 212/418 (50%), Gaps = 64/418 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPL 56
K+ E ++ +LWHACAG +V +P VFYFPQGH E S N + +PP
Sbjct: 30 KDAEAALFRELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPK 89
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV +++ A+ +TDEV+A++ L+P P + +N + SF KT
Sbjct: 90 ILCRVINVQLKAEPDTDEVFAQVTLLPEPNQD----ENAVEKEPPPPPPPRFHVHSFCKT 145
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+F+HI+RG PRRH
Sbjct: 146 LTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRH 205
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 206 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH---- 258
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 259 ------------------------SMHLG---------------------VLATAWHAIS 273
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 274 TGTIFTVYYKPRTSPAEFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVG 332
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
++ +DP W +S WR L+V WDE +RVSPW +E P L+P S R K
Sbjct: 333 IEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPA--LNPLSMPRPK 388
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 159/426 (37%), Positives = 209/426 (49%), Gaps = 67/426 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E + S + + IP P IFCRV +++
Sbjct: 53 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-VASFSPFTPLEIPTYDLQPQIFCRVVNVQ 111
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK------PASFAKTLTQ 119
LA+ E DEVY ++ L+P E + + + ++ P F KTLT
Sbjct: 112 LLANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKSTPHMFCKTLTA 171
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE FP LDY P Q +VAKD+H WKFRHIYRG PRRHLLT
Sbjct: 172 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHLLT 231
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+QK LV+GD+++FLR ++G+L +GIRRA + N+ P S S N
Sbjct: 232 TGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRA---VRPRNDLPESVIGSQN------ 282
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
C+ VL +VA A S K
Sbjct: 283 -------CYPN-------------------------------------VLSSVANAISTK 298
Query: 300 -PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
F V Y PRAS +F V +++ G RFKM FE ++S G +
Sbjct: 299 SKFHVFYSPRASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCCSGMLIGTS 358
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP WP S WR L V WDE + RVSPW ++ + +P + + SP KKLR
Sbjct: 359 DLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDPSAPLPPLSIQS-SPRLKKLRTG 417
Query: 419 QQLDFP 424
Q+ P
Sbjct: 418 LQVASP 423
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS LS Y +L L +F +E D +LY D+ I G
Sbjct: 667 KVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGLLKDPDKGWKILYTDSENDIMVVG 726
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 727 DDPWHEFCDVVSKIHI 742
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/399 (37%), Positives = 212/399 (53%), Gaps = 65/399 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + VFYFPQGH E S+N + ++ +P + C V +++
Sbjct: 22 ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLYDLPSKLLCSVINVE 81
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
A+++TDEVYA++ L+P E D + + +S + + KPA SF KTLT SD +
Sbjct: 82 LKAEADTDEVYAQVMLIP----ENDQNEMAVEKSSSKAATTLAKPAVRSFCKTLTASDTS 137
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +GWS
Sbjct: 138 THGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPRRHLLQSGWS 197
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LVAGD+ +FLR + G+L VG+RRA + + PSS +S+
Sbjct: 198 VFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSN---VPSSVISSH----------- 243
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L + + NT+ F V
Sbjct: 244 -----------------SMHLGVLATAWHAINTKSM---------------------FTV 265
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF + +++ ++ G+RF+M FE E++ F GTI + DP+
Sbjct: 266 YYKPRTSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPE-QRFTGTIIGSENLDPL 324
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 325 -WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 362
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 9/114 (7%)
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYE 637
+G T+E SI+++ S ++ Q G T C KV + +GR++DLS S Y+
Sbjct: 663 TGGTNENEKSIQQAPQS----SKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFSDYD 718
Query: 638 ELYRRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
EL L MF + M S ++Y D + GD+P+ +F +++ I
Sbjct: 719 ELKAELDKMFEFDGELMSSNKNWQIVYTDNEDDMMLVGDDPWGEFCSIVRKICI 772
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 208/416 (50%), Gaps = 70/416 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E V++ S IP P I CRV +++
Sbjct: 65 ELWHACAGPLTCLPKKGNVVVYFPQGHLEQD-AMVSYSSPLEIPKFDLNPQIVCRVVNVQ 123
Query: 66 FLADSETDEVYAKIKLVPIPANEI------DFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
LA+ +TDEVY ++ L+P+ + + ++ GS S P F KTLT
Sbjct: 124 LLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTLTA 183
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE F LDY P Q ++AKD+HG WKFRHIYRG PRRHLLT
Sbjct: 184 SDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLT 243
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+QK LV+GD+++FLR + G+L +GIRRA
Sbjct: 244 TGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRA------------------------- 278
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
AR N +S NS N +L VA A S K
Sbjct: 279 -----------------ARPRNGLPDSIIEKNSCSN------------ILSLVANAVSTK 309
Query: 300 P-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
F V Y PRA+ EF + ++R G RF+M FE +DS G ++ V
Sbjct: 310 SMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPE-RRCAGVVTGVC 368
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
DP WPNS WR L V WDE + + +RVSPW ++ ++P HLS S R K
Sbjct: 369 DLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HLSIQSSPRPK 422
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y++L L +F +E + +LY D+ + G
Sbjct: 669 KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVG 728
Query: 672 DEPFSDF 678
D+P+ DF
Sbjct: 729 DDPWHDF 735
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 158/426 (37%), Positives = 213/426 (50%), Gaps = 95/426 (22%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLK 65
S+ +LWHACAG ++ +P S V YFPQGH E ++P+ + +PP +FCRV +K
Sbjct: 45 SVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL---SDYPAVAYDLPPHVFCRVVDVK 101
Query: 66 FLADSETDEVYAKIKLVP-----IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
A+ TDEVYA++ LVP E + E + + +S P F KTLT S
Sbjct: 102 LHAEVVTDEVYAQVSLVPETKIKQKLQEGEIEADGGEEEDIEGSIKSMTPHMFCKTLTAS 161
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQPRRHLLTT 221
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FVN+KKLV+GD+++FLR DG+L +GIRRA + I G + +P+ C
Sbjct: 222 GWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQ-IKGSSPFPA--------LC---- 268
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+ +NLN+ L AV A S +
Sbjct: 269 ------------------SQQLNLNT----------------------LTAVVNAISTRS 288
Query: 301 -FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS+ EF + ++ + GMRFKM ETED++ + G I+ +
Sbjct: 289 VFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDAAE-RRYTGLITGISD 347
Query: 360 ADPISWPNSPWRL------------------------------LQVTWDEPDLLQNVKRV 389
DP+ WP S WR LQV WD+ + ++ RV
Sbjct: 348 MDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDDIEANRH-NRV 406
Query: 390 SPWLVE 395
SPW +E
Sbjct: 407 SPWEIE 412
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 251/504 (49%), Gaps = 87/504 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E S N + IP P +
Sbjct: 17 KKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E + L S S++P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLSPQE----QKEVCLLPAELGSPSKQPTNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q ++A+D+HG WKFRHI+RG P+RHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+L+AGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 193 LTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANR---PQTIMPSSVLSSDSMHI- 248
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + + LA
Sbjct: 249 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFV--IPLAKY 284
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K VY+ R V MR F+M FETE+SS + +MGTI+ +
Sbjct: 285 AK---AVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGI 320
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 321 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPW 378
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGP---SSPLCCL-SDNTSAGIQGARHAQFGIS------ 467
P L P F + G +SPL L D GIQ +G++
Sbjct: 379 PSAL----------PSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYGLTPWMQPR 428
Query: 468 --SSDFHVNNKLQSGLFLSSLQRF 489
+S + + +Q + +SLQ
Sbjct: 429 LDASMLGLQSNMQQAIAAASLQEL 452
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 625 GRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDFM 679
GR+LD++ SSY+EL L MFG+E D L +++ D + GD+P+ +F+
Sbjct: 692 GRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFV 751
Query: 680 KSAKRLTIL 688
+ + IL
Sbjct: 752 NNVWYIKIL 760
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 222/427 (51%), Gaps = 68/427 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E +K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 22 EEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQ 81
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ E+ +D L +GS +++P + F K
Sbjct: 82 LICQLHNVTMHADAETDEVYAQMTLQPLSPQEL--KDPYLPAE-LGS--ANKQPTNYFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 197 HLLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQL 228
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
+ R N S S ++ G ++ A A
Sbjct: 229 LLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAA 264
Query: 296 ASGKPFEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI
Sbjct: 265 STNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTI 323
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + D WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 324 TGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLK 381
Query: 415 LRLPQQL 421
P L
Sbjct: 382 RPWPTGL 388
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLS--HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL R L +FG+E + + S +++ D +
Sbjct: 789 VKVY-KSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLL 847
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 848 VGDDPWQEFVNSVSCIKILSPQEVQQMGK 876
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/440 (38%), Positives = 219/440 (49%), Gaps = 83/440 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E + S++ SS IP P I CRV +++
Sbjct: 56 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-VASLSLFSSLEIPTYGLQPQILCRVVNVQ 114
Query: 66 FLADSETDEVYAKIKLVPIPANEI------DFEDNNLSLNSVGSDSESEKPAS--FAKTL 117
LA+ E DEVY ++ L +P E+ D E L + G+ K AS F KTL
Sbjct: 115 LLANKENDEVYTQVAL--LPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTL 172
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG------ 171
T SD + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG
Sbjct: 173 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETEL 232
Query: 172 ------TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYP 225
PRRHLLTTGWS FV+QK LV+GD+++FLR ++G+L +GIRRA + G P
Sbjct: 233 LCWLDCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNG---LP 289
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
S + GN SC SF SS
Sbjct: 290 ES---------IIGNQ----SC-------------------SPSFLSS------------ 305
Query: 286 EMVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS 344
VA A S K F V Y PRAS +F V ++R G RFKM FE ++S
Sbjct: 306 ------VANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDES 359
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
G ++ + DP WP S WR L V WDE + RVSPW ++ +++P ++
Sbjct: 360 PERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLN 419
Query: 405 LSPFSPARKKLRLPQQLDFP 424
+ S KKLR ++ P
Sbjct: 420 IQS-SRRLKKLRTGLHVESP 438
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS LSSY +L L +FG+E D +LY D+ I G
Sbjct: 698 KVHKQGSLVGRAIDLSRLSSYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVG 757
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 758 DDPWHEFCDMVSKIHI 773
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 222/427 (51%), Gaps = 68/427 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E +K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 22 EEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQ 81
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ E+ +D L +GS +++P + F K
Sbjct: 82 LICQLHNVTMHADAETDEVYAQMTLQPLSPQEL--KDPYLPAE-LGS--ANKQPTNYFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 197 HLLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQL 228
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
+ R N S S ++ G ++ A A
Sbjct: 229 LLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAA 264
Query: 296 ASGKPFEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI
Sbjct: 265 STNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTI 323
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + D WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 324 TGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLK 381
Query: 415 LRLPQQL 421
P L
Sbjct: 382 RPWPTGL 388
Score = 43.1 bits (100), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLS--HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL R L +FG+E + + S +++ D +
Sbjct: 789 VKVY-KSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLL 847
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 848 VGDDPWQEFVNSVSCIKILSPQEVQQMGK 876
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 214/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 48 AERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P E + ++N + + + S
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLP----EANQDENAIEKEAPLPPPPRFQVHS 163
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 280
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 281 ----------------------------SMHLG----------------------VLATA 290
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQR-FT 349
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP WP S WR L+V WDE + RVSPW VE P LSP
Sbjct: 350 GTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPA--LSPVPMP 407
Query: 412 RKK 414
R K
Sbjct: 408 RPK 410
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 222/427 (51%), Gaps = 68/427 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 23 EEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQ 82
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ N + +D L +GS +++P + F K
Sbjct: 83 LICQLHNVTMHADAETDEVYAQMTLQPL--NPQELKDPYLPAE-LGS--ANKQPTNYFCK 137
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 138 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKR 197
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 198 HLLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQL 229
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
+ R N S S ++ G ++ A A
Sbjct: 230 LLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAA 265
Query: 296 ASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI
Sbjct: 266 STNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTI 324
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + D + WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 325 TGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLK 382
Query: 415 LRLPQQL 421
P L
Sbjct: 383 RPWPTGL 389
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL R L +FG+E D L +++ D +
Sbjct: 790 VKVY-KSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLL 848
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ + + IL +G+
Sbjct: 849 VGDDPWQEFVSTVSCIKILSPQEVQQMGK 877
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 239/499 (47%), Gaps = 94/499 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--FPSSSRIPPLIFCRVSSLK 65
ID +W ACA + +IP + + V YFP+GHAE + PS+ R C ++++
Sbjct: 24 IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHR---FFLCTITAVD 80
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
AD+ T E YA I L+P+ + + +++ES++ +AK LTQSDANNG
Sbjct: 81 LSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNG 140
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR CA+ IFP L+ DPPVQ++ D+ G+ W+FRHIYRGTPRRHLLTTGWS F
Sbjct: 141 GGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKF 200
Query: 186 VNQKKLVAGDSIVFL----RAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
VN K+LVAGD++VF+ A + L VG+RRA + G
Sbjct: 201 VNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSG---------------------- 238
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
S+ N R GRV+P+ V+EAV LAA F
Sbjct: 239 -----------------------------ESACNAR---GRVQPQEVMEAVRLAAEQAAF 266
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFK-MAFETEDSSRISWFMGTISSVQVA 360
V YYPR EF V V + W CGM+ + E ED+ R++W GT+++++
Sbjct: 267 RVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDTRRLAWLNGTLTNLRH- 325
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKR--VSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
WR L+V WD ++K V+PW V+ V F P L++
Sbjct: 326 ------QQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVD---------FPPLPMGLKI- 369
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR----HAQFGISSSDFHVN 474
+ + P+ +G+ L L A IQGAR HA I SS
Sbjct: 370 ------SNNNISAPVCNGDSLLVPPILMHPQPQPPADIQGARHNNGHAYADIPSSSTPSM 423
Query: 475 NKLQSGLFLSSLQRFTPNS 493
+ Q LF LQ P++
Sbjct: 424 VRTQQ-LFPRDLQILVPHT 441
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 218/693 (31%), Positives = 312/693 (45%), Gaps = 102/693 (14%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S++ PS + +P I C+V ++
Sbjct: 30 ELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVVNV 88
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A+ ETDEVYA+I L+P P NE+ S + + E SF KTLT SD +
Sbjct: 89 QRRAEPETDEVYAQITLLPEPDPNEV------TSPDPPPPEPEKCTVHSFCKTLTASDTS 142
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 143 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWS 202
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVAGD+ +FLR + G+L VG+ ++ + PSS +S++
Sbjct: 203 VFVSSKKLVAGDAFIFLRGETGELRVGV---RRHMRQQTNMPSSVISSHS---------- 249
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
M+L ++ A A+G F +
Sbjct: 250 ------------------MHLG---------------------VLATASHAIATGTLFSI 270
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF V + A + GMRFKM FE E+ F G I V+
Sbjct: 271 FYKPRTSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVPD-EGFSGIIVGVEDNKTS 329
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRL-PQQL 421
+WPNS WR L+V WDEP + RVS W +E LV+N PA++ R P L
Sbjct: 330 AWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPPPNSQPAQRNKRARPPVL 389
Query: 422 DFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGL 481
P + ++ SP+ ++ + ++H + S F K
Sbjct: 390 PTPAPDLSVLGMWK-------SPV----ESQAFSYSDSQHGRDLYLSPKFSPATKANPLG 438
Query: 482 F--LSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQ 539
F SSL T NS + N EN+ S ++ EK + + + LFG
Sbjct: 439 FGGNSSLAAVTGNSMYW-------PNRGENVMESFAPVVSKESSEKRQGTG-NTYKLFGI 490
Query: 540 PIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEK-SSSSEFF 598
+ I S + +S +G D+ S D H + +I S +E
Sbjct: 491 QLVDNSNIEESSAAVTMSATVG-------DDRPVPSLDADSEQHSEPSNIPSVSCDAEKS 543
Query: 599 WNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERSDMLS 656
RS Q ++S KV ++ VGR +DL+ Y++L +RL MF I E S
Sbjct: 544 CLRSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEEMFDIGGELSGATK 603
Query: 657 --HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+ +F +++ I
Sbjct: 604 KWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFI 636
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/475 (35%), Positives = 244/475 (51%), Gaps = 81/475 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 21 KKCLNSELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLI 80
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ ++ D +D L +G+ S++P + F KTL
Sbjct: 81 CQLHNVTMHADVETDEVYAQMTLQPL--SQDDQKDAYLLPAELGT--ASKQPTNYFCKTL 136
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 137 TASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHL 196
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 197 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTFMPSSVLSSDSMHI- 252
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP-EMVLEAVALAA 296
G + ++ + +S T R P E V+ V
Sbjct: 253 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLV---- 286
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
K + VY+ R V MR F+M FETE+SS + +MGTI+
Sbjct: 287 --KYIKAVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITG 323
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ S F P R K
Sbjct: 324 ISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSAF-PMRLKRP 381
Query: 417 LPQQLDFPFDGQFTMPLFSG---NPLGPSSPLCCLSDNT-SAGIQGARHAQFGIS 467
P L P F G L +SP+ L G+Q FG++
Sbjct: 382 WPSGL----------PSFHGLQDGDLNINSPMMWLQGGVGDLGVQSLNFQSFGVA 426
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 218/700 (31%), Positives = 310/700 (44%), Gaps = 119/700 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P I C+V +++
Sbjct: 20 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPHKILCKVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P + + S F KTLT SD +
Sbjct: 80 LRAETDSDEVYAQIMLQPQTEQSEPTSPDPEPPEPERCNIHS-----FCKTLTASDTSTH 134
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
G SV R AE P+LD T +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 135 G-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 193
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 194 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH------------- 237
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+M+L ++ A ++G F V Y
Sbjct: 238 ---------------SMHLG---------------------VLATASHAISTGTLFSVFY 261
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVADPI 363
PR S EF V + A GMRFKM FE ++S R S + + +
Sbjct: 262 KPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDESPERRFSGIIIGMGCMPANSTS 321
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA----RKKLRLPQ 419
W NS WR L+V WDEP + RVSPW VE P+ +P P K+ R P
Sbjct: 322 PWANSEWRSLKVQWDEPSAILRPDRVSPWEVE-----PLNRTNPQPPQPPLRNKRARPPA 376
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
P P+F G P+ P S +G+Q R + SS ++ L
Sbjct: 377 S---PSIAPELAPVF-GFWKSPAEPAQAFS---FSGLQ--RTQELYHSSPSSMFSSSLNV 427
Query: 480 GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFG- 538
G F + TPN+ T +E+ S + + EK + LFG
Sbjct: 428 G-FNPKYEGPTPNTNHL--YWTMRETRTESYSASINKAPT----EKKQESTTSGCRLFGI 480
Query: 539 -------QPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEK 591
P+ T + H + S D SD++ S +H + +
Sbjct: 481 EIGSSAVSPVVTVASVGHDPPPPAL-------SVDAESDQL------SQPSHANKATDAP 527
Query: 592 SSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-- 649
++SS +RS TES KV ++ VGR +DL+ L Y++L R+L MF I
Sbjct: 528 AASS----DRSPNETESRQARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPG 583
Query: 650 ERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
E S L+ V+Y D + GD+P+S+F + KR+ I
Sbjct: 584 ELSASLNKWKVIYTDDEDDMMLVGDDPWSEFCRMVKRIYI 623
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 236/471 (50%), Gaps = 77/471 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP + C
Sbjct: 18 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
++ ++ AD ETDEVYA++ L P+ E + L + + F KTLT
Sbjct: 78 QLHNVTMHADVETDEVYAQMTLQPLSPQE----QKDAYLPAELGTPNKQPTNYFCKTLTA 133
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLT 193
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 194 TGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHL--- 247
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
G + ++ + +S T R P + +A K
Sbjct: 248 --------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA-----K 282
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
+ VY+ R V MR F+M FETE+SS + +MGTI+ +
Sbjct: 283 YVKAVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 322 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 379
Query: 420 QLDFPFDGQFTMPLFSG---NPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
L P F G + LG +SPL L + GIQ G++
Sbjct: 380 GL----------PSFHGIKDDDLGMNSPLMWLRGDADRGIQSMNFQGLGVT 420
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/427 (37%), Positives = 222/427 (51%), Gaps = 68/427 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E +K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 22 EEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQ 81
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ E+ +D L +GS +++P + F K
Sbjct: 82 LICQLHNVTMHADAETDEVYAQMTLQPLSPQEL--KDPYLPAE-LGS--ANKQPTNYFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIAKDLHGNEWKFRHIFRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVA GD + I WN NN
Sbjct: 197 HLLTTGWSVFVSAKRLVA-----------GDSVLFI-----------------WNDNNQL 228
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
+ R N S S ++ G ++ A A
Sbjct: 229 LLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAA 264
Query: 296 ASGKPFEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI
Sbjct: 265 STNSRFTIFYNPRASPSEFVIPLSKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTI 323
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + D WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 324 TGISDLDAARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLK 381
Query: 415 LRLPQQL 421
P L
Sbjct: 382 RPWPTGL 388
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 161/435 (37%), Positives = 215/435 (49%), Gaps = 83/435 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LWHACAG + +P + V Y PQGH EH LG ++ +PP +FCRV +
Sbjct: 56 ELWHACAGPVAPLPRKGTVVVYLPQGHLEH-LGDAAAAAAGGAPAPAALPPHVFCRVVDV 114
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE---------------SEK 109
AD+ TDEVYA++ LV + ED L GS+ S
Sbjct: 115 TLHADASTDEVYAQLALV------AENEDVARRLRG-GSEDGSAGDGDDGEAVKQRFSRM 167
Query: 110 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIY 169
P F KTLT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIY
Sbjct: 168 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIY 227
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGW 229
RG PRRHLLTTGWS FVN+KKLV+GD+++FLR DG+L +G+RRA + + G+ +P+
Sbjct: 228 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQ-LKNGSAFPA--- 283
Query: 230 NSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVL 289
N NL S + V
Sbjct: 284 ---------------------------LYNQCSNLGSLAN------------------VA 298
Query: 290 EAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISW 349
AVA + F + Y PR S EF + S + + G+RFKM +E++D+S
Sbjct: 299 HAVATKSV---FHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFKMRYESDDASE-RR 354
Query: 350 FMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS 409
G I+ + ADP+ W S W+ L V WD+ + R+SPW +EL S++ HLS +
Sbjct: 355 CTGVIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTSSVSGSHLSAPN 413
Query: 410 PARKKLRLPQQLDFP 424
R K LP P
Sbjct: 414 AKRLKPCLPPDYLVP 428
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 170/472 (36%), Positives = 233/472 (49%), Gaps = 75/472 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +PP+ S V YFPQGH+ S N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ +L AD ETDEVYA++ L P+ E ++ L S+ P + F KTL
Sbjct: 78 CQLHNLTMHADVETDEVYAQMTLQPLSPQE----QKDVCLLPAELGIPSKLPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++AKD+HG WK RHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVA GD + I WN NN +
Sbjct: 194 LTTGWSVFVSAKRLVA-----------GDAVIFI-----------------WNENNQLLL 225
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
+R N L + +S G ++ A A+
Sbjct: 226 G----------IRRA------NRPQTLMPFSVLSSDSMHIG--------LLAAAAHATAT 261
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PRAS EF + A KA GMRF+M FETE+SS + +MGTI+
Sbjct: 262 NTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITG 320
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPFS +L+
Sbjct: 321 ISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFS---LRLK 376
Query: 417 LPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
P P ++P F L +SPL L D G+Q FG +
Sbjct: 377 RPWPSGLP-----SLPGFPNVGLTMNSPLSWLRGDMGDQGMQSLNFQGFGAT 423
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 213/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 48 AERAVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 107
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P P + ++N + + + S
Sbjct: 108 LPSKLLCRVINVDLKAEADTDEVYAQITLLPEP----NQDENVIEKETPPPPPPRFQVHS 163
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 164 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 224 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 280
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 281 ----------------------------SMHLG----------------------VLATA 290
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 291 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 349
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +DP W S WR L+V WDE + RVSPW +E P LSP
Sbjct: 350 GTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPA--LSPVPMP 407
Query: 412 RKK 414
R K
Sbjct: 408 RPK 410
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 212/427 (49%), Gaps = 69/427 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF-PSSSR---IPPLIFCRVSSLKF 66
+LWHACAG + +P + V YFPQGH E + F P R + P I CRV ++
Sbjct: 54 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPHILCRVINVHL 113
Query: 67 LADSETDEVYAKIKLVPIP----ANEIDFEDNNLSLNSVGSDSESEKPAS-----FAKTL 117
LA+ E DEVY ++ L P+P E L+LN D P F KTL
Sbjct: 114 LANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKTL 173
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE FP LDYT P Q ++AKD+HG W+FRHIYRG PRRHL
Sbjct: 174 TASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPRRHL 233
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+QK L++GD+++FLR ++G+L +GIRRA + G P S N SC
Sbjct: 234 LTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNG---LPDS-IVGNQNSCA 289
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
N +AR V++A++ ++
Sbjct: 290 ----------------NDLAR-----------------------------VVKAISTKST 304
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
F+V Y PRA +F + ++ G RFKM FE +DS F G + +
Sbjct: 305 ---FDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE-RRFNGVVVGI 360
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
D WPNS WR L V WD+ Q +RVSPW ++ ++P + + SP KKLR
Sbjct: 361 SDMDSFRWPNSKWRCLTVRWDKDSDHQ--ERVSPWEIDPSVSLPPLSVQS-SPRLKKLRT 417
Query: 418 PQQLDFP 424
Q P
Sbjct: 418 SLQAAPP 424
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y +L L +F +E D VLY D + G
Sbjct: 678 KVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVG 737
Query: 672 DEPFSDFMKSAKRLTI 687
D P+ DF + ++ I
Sbjct: 738 DYPWHDFCDAVSKIHI 753
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 213/423 (50%), Gaps = 72/423 (17%)
Query: 4 VEKSIDPQ------LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR----- 52
E+++DP+ LWHACAG +V +P + VFYFPQGH E S N + +
Sbjct: 44 AERAVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYD 103
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P + CRV ++ A+++TDEVYA+I L+P E + ++N + + + S
Sbjct: 104 LPSKLLCRVINVDLKAEADTDEVYAQITLLP----EANQDENAIEKEAPPPPPPRFQVHS 159
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG
Sbjct: 160 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQ 219
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 220 PRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH 276
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+M+L VL
Sbjct: 277 ----------------------------SMHLG----------------------VLATA 286
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A S VYY PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 287 WHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFT 345
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI ++ +D WP S WR L+V WDE + RVSPW +E P LSP
Sbjct: 346 GTIVGIEDSDITRWPKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPA--LSPVPMP 403
Query: 412 RKK 414
R K
Sbjct: 404 RPK 406
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 218/448 (48%), Gaps = 87/448 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG + +P S V Y PQGH EH LG +PP +FCRV +
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEH-LGDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK--------------PA 111
AD+ TDEVYA++ LV + ED L D +E P
Sbjct: 111 LHADASTDEVYAQLALV------AENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPH 164
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
F KTLT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG
Sbjct: 165 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRG 224
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLLTTGWS FVN+KKLV+GD+++FLR +G+L +G+RRA + + G+ +P+
Sbjct: 225 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQ-LKNGSAFPA----- 278
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
N +NL S L
Sbjct: 279 -------------------------LYNQCLNLGS----------------------LPN 291
Query: 292 VALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
VA A + K F + Y PR S EF + S + + G RFK+ +E++D+S
Sbjct: 292 VAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASE-RRC 350
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
G I+ + ADP+ W S W+ L V WD+ + R+SPW +EL S++ H+S +
Sbjct: 351 TGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIELTSSVSGSHMSAPNA 409
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGNP 438
R K LP + + +P SG P
Sbjct: 410 KRLKPCLPH-----VNPDYLVPNGSGRP 432
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 212/427 (49%), Gaps = 69/427 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF-PSSSR---IPPLIFCRVSSLKF 66
+LWHACAG + +P + V YFPQGH E + F P R + P I CRV ++
Sbjct: 54 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPHILCRVINVHL 113
Query: 67 LADSETDEVYAKIKLVPIP----ANEIDFEDNNLSLNSVGSDSESEKPAS-----FAKTL 117
LA+ E DEVY ++ L P+P E L+LN D P F KTL
Sbjct: 114 LANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTPHMFCKTL 173
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE FP LDYT P Q ++AKD+HG W+FRHIYRG PRRHL
Sbjct: 174 TASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPRRHL 233
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+QK L++GD+++FLR ++G+L +GIRRA + G P S N SC
Sbjct: 234 LTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNG---LPDS-IVGNQNSCA 289
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
N +AR V++A++ ++
Sbjct: 290 ----------------NDLAR-----------------------------VVKAISTKST 304
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
F+V Y PRA +F + ++ G RFKM FE +DS F G + +
Sbjct: 305 ---FDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPERK-FNGVVVGI 360
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
D WPNS WR L V WD+ Q +RVSPW ++ ++P + + SP KKLR
Sbjct: 361 SDMDSFRWPNSKWRCLTVRWDKDSDHQ--ERVSPWEIDPSVSLPPLSVQS-SPRLKKLRT 417
Query: 418 PQQLDFP 424
Q P
Sbjct: 418 SLQAAPP 424
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y +L L +F +E D VLY D + G
Sbjct: 609 KVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVG 668
Query: 672 DEPFSDFMKSAKRLTI 687
D P+ DF + ++ I
Sbjct: 669 DYPWHDFCDAVSKIHI 684
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 162/448 (36%), Positives = 218/448 (48%), Gaps = 87/448 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG + +P S V Y PQGH EH LG +PP +FCRV +
Sbjct: 52 ELWHACAGPVAPLPRKGSVVVYLPQGHIEH-LGDAAAAGGGAPPPVALPPHVFCRVVDVT 110
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK--------------PA 111
AD+ TDEVYA++ LV + ED L D +E P
Sbjct: 111 LHADASTDEVYAQLALV------AENEDVARRLRGRSEDGSAEDGDEGETVKQRFSRMPH 164
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
F KTLT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG
Sbjct: 165 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRG 224
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLLTTGWS FVN+KKLV+GD+++FLR +G+L +G+RRA + + G+ +P+
Sbjct: 225 QPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGELRLGVRRAAQ-LKNGSAFPA----- 278
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
N +NL S L
Sbjct: 279 -------------------------LYNQCLNLGS----------------------LPN 291
Query: 292 VALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
VA A + K F + Y PR S EF + S + + G RFK+ +E++D+S
Sbjct: 292 VAHAVATKSVFHIYYNPRLSQSEFIIPFSKFIKSFSQPFSAGSRFKVKYESDDASE-RRC 350
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
G I+ + ADP+ W S W+ L V WD+ + R+SPW +EL S++ H+S +
Sbjct: 351 TGIIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRQPNRISPWEIELTSSVSGSHMSAPNA 409
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGNP 438
R K LP + + +P SG P
Sbjct: 410 KRLKPCLPH-----VNPDYLVPNGSGRP 432
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/427 (37%), Positives = 212/427 (49%), Gaps = 69/427 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF-PSSSR---IPPLIFCRVSSLKF 66
+LWHACAG + +P + V YFPQGH E + F P R + P I CRV ++
Sbjct: 54 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPHILCRVINVHL 113
Query: 67 LADSETDEVYAKIKLVPIP----ANEIDFEDNNLSLNSVGSDSESEKPAS-----FAKTL 117
LA+ E DEVY ++ L P+P E L+LN D P F KTL
Sbjct: 114 LANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKTL 173
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE FP LDYT P Q ++AKD+HG W+FRHIYRG PRRHL
Sbjct: 174 TASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPRRHL 233
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+QK L++GD+++FLR ++G+L +GIRRA + G P S N SC
Sbjct: 234 LTTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNG---LPDS-IVGNQNSCA 289
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
N +AR V++A++ ++
Sbjct: 290 ----------------NDLAR-----------------------------VVKAISTKST 304
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
F+V Y PRA +F + ++ G RFKM FE +DS F G + +
Sbjct: 305 ---FDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPE-RRFNGVVVGI 360
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
D WPNS WR L V WD+ Q +RVSPW ++ ++P + + SP KKLR
Sbjct: 361 SDMDSFRWPNSKWRCLTVRWDKDSDHQ--ERVSPWEIDPSVSLPPLSVQS-SPRLKKLRT 417
Query: 418 PQQLDFP 424
Q P
Sbjct: 418 SLQAAPP 424
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y +L L +F +E D VLY D + G
Sbjct: 609 KVHKQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVG 668
Query: 672 DEPFSDFMKSAKRLTI 687
D P+ DF + ++ I
Sbjct: 669 DYPWHDFCDAVSKIHI 684
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 162/430 (37%), Positives = 231/430 (53%), Gaps = 74/430 (17%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 22 EEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQ 81
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ N + +D L +GS +++P + F K
Sbjct: 82 LICQLHNVTMHADAETDEVYAQMTLQPL--NPQELKDPYLPAE-LGS--ANKQPTNYFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S+
Sbjct: 197 HLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANR---PQTVMPSSVLSSD--- 250
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGN---GGRVKP-EMVLEA 291
+ ++ L + + +S N+R R P E V+
Sbjct: 251 -----------------------SMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPL 287
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
V K + VY+ R + MR F+M FETE+SS + +M
Sbjct: 288 V------KYVKAVYHTR------------ISVGMR--------FRMLFETEESS-VRRYM 320
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI+ + D + WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P
Sbjct: 321 GTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PL 378
Query: 412 RKKLRLPQQL 421
R K P L
Sbjct: 379 RLKRPWPTGL 388
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 149/417 (35%), Positives = 213/417 (51%), Gaps = 63/417 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E ++ +LWHACAG +V +P V+YFPQGH E S N + ++P I C
Sbjct: 42 EMALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILC 101
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV +++ A+ +TDEV+A++ L+P E + ++N + SF KTLT
Sbjct: 102 RVINVQLKAEPDTDEVFAQVTLLP----ESNQDENAVEKEPPPPPPPRFHVHSFCKTLTA 157
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A+ P LD + PP Q + AKD+HG W+FRHI+RG PRRHLL
Sbjct: 158 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQ 217
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
+GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 218 SGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH------- 267
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+M+L ++ A ++G
Sbjct: 268 ---------------------SMHLG---------------------VLATAWHAVSTGT 285
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI ++
Sbjct: 286 MFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIED 344
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
ADP W +S WR L+V WDE + +RVSPW +E P ++ P P K+ R
Sbjct: 345 ADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEPALAPPALNSLPM-PRPKRPR 400
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 11/214 (5%)
Query: 520 NQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGS 579
+Q KS++ K LF + E +SH + + + L + SD+ S S
Sbjct: 626 DQEAGKSKDCKLFGIPLFSNHVMPEPVVSHRNTMNEPAGNLDQQFRAFESDQKSEHSKSS 685
Query: 580 GSTHEQRISIEKSSSSEFFWNRSFQV---TESGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
+ ++ E S+ + V T+ G KV + +GR++DLS ++Y
Sbjct: 686 KLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDLSKFNNY 745
Query: 637 EELYRRLAIMFGIERSDMLSH----VLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSG 692
+EL L +F + M ++Y D G + GD+P+ +F +++ I
Sbjct: 746 DELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEE 805
Query: 693 SDSVGRTWIT--GMRTPKN--GLDASNKTGPLSI 722
+ ++ G +P N G+DA PL +
Sbjct: 806 VLKMNSVSLSSKGEDSPMNGEGIDAKEVKQPLPL 839
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 214/421 (50%), Gaps = 65/421 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPL 56
++ E ++ +LWHACAG +V +P VFYFPQGH E S N + + +PP
Sbjct: 44 RDAETALYNELWHACAGPLVTVPREGDHVFYFPQGHLEQVEASTNQVADQQMPLYDLPPK 103
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPASFAK 115
I CRV +++ A+ +TDEV+A++ L+P+ +D N S SF K
Sbjct: 104 ILCRVVNVQLKAEPDTDEVFAQVTLLPL-----HNQDENASEKEPPPPPPPRFHVHSFCK 158
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRR
Sbjct: 159 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGSEWRFRHIFRGQPRR 218
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + + PSS +S++
Sbjct: 219 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGV---RRAMRQQSNVPSSVISSHS-- 273
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
M+L ++ A
Sbjct: 274 --------------------------MHLG---------------------VLATAWHAV 286
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
++G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 287 STGTMFTVYYKPRTSPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEAPE-QRFTGTIV 345
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
++ ADP W +S WR L+V WDE + RVSPW +E P ++ P P K+
Sbjct: 346 GIEDADPSRWKDSKWRCLKVRWDETSTIPRPDRVSPWKIEPALAPPALNPLPM-PRPKRP 404
Query: 416 R 416
R
Sbjct: 405 R 405
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 248 bits (633), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 242/470 (51%), Gaps = 74/470 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 17 KRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E + + +G S++P++ F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLSPQE---QKDAYLPAELGV--PSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHL- 247
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + + LA
Sbjct: 248 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFV--IPLAKY 283
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K VY+ R V MR F+M FETE+SS + +MGTI+ +
Sbjct: 284 AK---AVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGI 319
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPW 377
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGI 466
P G ++ + LG +SPL L DN GIQ G+
Sbjct: 378 P-------PGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGV 420
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 10/81 (12%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S GR+LD++ SSY EL LA MFG+E RS +++ D +
Sbjct: 778 VKVY-KSGSFGRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGW--QLVFVDRENDV 834
Query: 668 KRTGDEPFSDFMKSAKRLTIL 688
GD+P+ +F+ S + IL
Sbjct: 835 LLLGDDPWPEFVNSVWCIKIL 855
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/399 (37%), Positives = 209/399 (52%), Gaps = 65/399 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + VFYFPQGH E S+N + S+ +P + CRV +++
Sbjct: 24 ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVE 83
Query: 66 FLADSETDEVYAKIKLVPIPA-NEIDFEDNNLSLNSVGSDSESEKPA-SFAKTLTQSDAN 123
A+ +TDEVYA++ L+P P NE+ E + V ++ P SF KTLT SD +
Sbjct: 84 LKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPV----QARPPVRSFCKTLTASDTS 139
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VAKD+H W+FRHI+RG PRRHLL +GWS
Sbjct: 140 THGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWS 199
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + + PSS +S +
Sbjct: 200 VFVSSKRLVAGDAFIFLRGENGELRVGV---RRAMRQLSNVPSSVISSQS---------- 246
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
M+L + + NT+ F V
Sbjct: 247 ------------------MHLGVLATAWHAINTKSM---------------------FTV 267
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF + +++ ++ GMRF+M FE E++ F GTI + DP+
Sbjct: 268 YYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR-FTGTIIGSENLDPV 326
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 327 -WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 364
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRT 670
KV + +GR++DLS S+Y+EL L MF + S+ ++Y D G +
Sbjct: 695 TKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLV 754
Query: 671 GDEPFSDFMKSAKRLTI 687
GD+P+ +F +++ I
Sbjct: 755 GDDPWEEFCSIVRKIYI 771
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 152/418 (36%), Positives = 212/418 (50%), Gaps = 66/418 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG + +P S V Y PQGH EH + + +PP +FCRV + AD+
Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGSGPGAAVPPHVFCRVVDVSLHADA 98
Query: 71 ETDEVYAKIKLVPIPANEIDFE------DNNLSLNSVGSDS---ESEKPASFAKTLTQSD 121
TDEVYA++ LV A+ + E ++ + + G D+ + P F KTLT SD
Sbjct: 99 ATDEVYAQVSLV---ADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASD 155
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRHLLTTG
Sbjct: 156 TSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTG 215
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS F+N+KKLV+GD+++FLR +DG+L +G+RRA + +P
Sbjct: 216 WSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQ-------------------LKNASP 256
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
F N+++ +++ V AVA+ + F
Sbjct: 257 FPAL-------HNQISNTSSLS-----------------------EVAHAVAVKSI---F 283
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+ Y PR S EF + + + GMRFK+ +E+ED+S G I + AD
Sbjct: 284 HIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASE-RRRTGIIIGSREAD 342
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
P+ W S W+ L V WD+ + VSPW +EL ++ HLS R K PQ
Sbjct: 343 PM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTPHSKRLKSCFPQ 399
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 149/400 (37%), Positives = 198/400 (49%), Gaps = 71/400 (17%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFC 59
K I +LWHACAG +V +P + S V+YFPQGH+E S N ++S+IP + C
Sbjct: 39 KLISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQLLC 98
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V ++ AD ETDE+YA++ L P+ + E + + G F KTLT
Sbjct: 99 QVHNVTLHADKETDEIYAQMSLQPV-----NSEKDVFPIPDFGLKPNKHPTEFFCKTLTA 153
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE +FP LDY+ PP Q +V +D+H W FRHIYRG P+RHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHLLT 213
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV K+L AGDS++
Sbjct: 214 TGWSMFVGAKRLRAGDSVL----------------------------------------- 232
Query: 240 NPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F+R+E++++ R N S S S ++ G ++ A AA
Sbjct: 233 --------FIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIG------VLAAAAHAAA 278
Query: 297 SGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
+ F + Y PRA EF + A K+ GMRF M FETE+S + +MGTIS
Sbjct: 279 NRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEESGKRR-YMGTIS 337
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVSPW VE
Sbjct: 338 GISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVE 377
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQN----------LEKS 526
LQ L ++++Q F P+S F + N S+ SCL NS L++
Sbjct: 681 LQVPLDITNMQ-FLPDSYGFKDLSEESHNQSDIYSCLNFDSNSGSTVIDNSVSSTVLDEF 739
Query: 527 ENIKKHQF-----LLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGS 581
N+K F L G + S S DV SQ+ S +D + V+ +D SG
Sbjct: 740 CNLKHTDFQNPSDFLLG---------NISSSQDVQSQITSASLADSQNFSVQEFADNSGG 790
Query: 582 THEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYR 641
++ ++ + N S+Q + T + K+ ++ VGR++D+S +YEEL
Sbjct: 791 ASSSNVNFDECN---LLQNSSWQQVAPRVRT-YTKI-QKTGSVGRSIDVSGFKNYEELRS 845
Query: 642 RLAIMFGIERSDMLS-------HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSD 694
+ MFG+E +L+ ++Y D + GD+P+ +F+ + + IL +
Sbjct: 846 EIERMFGLE--GLLNDTRGSSWKLVYVDFENDVLLVGDDPWEEFVGCVRCIRILSPTEVQ 903
Query: 695 SVGR 698
+G
Sbjct: 904 QMGE 907
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 243/471 (51%), Gaps = 74/471 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 17 KRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E + + +G S++P++ F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLSPQE---QKDAYLPAELGV--PSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHL- 247
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + + LA
Sbjct: 248 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFV--IPLAKY 283
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K VY+ R V MR F+M FETE+SS + +MGTI+ +
Sbjct: 284 AK---AVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGI 319
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 320 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPW 377
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
P G ++ + LG +SPL L DN GIQ G++
Sbjct: 378 P-------PGLPSLHGIKDDDLGMNSPLMWLRGDNVDRGIQSLNFQGIGVN 421
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 215/412 (52%), Gaps = 63/412 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG + +P S V YFPQGH E LG +++ +PP +FCRV + AD+
Sbjct: 68 ELWHACAGPVAPMPRKGSVVVYFPQGHLEQ-LGGDAAAANAPVPPHVFCRVVDVSLHADA 126
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK------PASFAKTLTQSDANN 124
TDEVYA++ L+P + + S G D E+ K P F KTLT SD +
Sbjct: 127 STDEVYAQLSLLPENEEAVRRKREGAEEGSGGEDGETGKQRFSRMPHMFCKTLTASDTST 186
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDY+ P Q + AKD+HG WKFRHIYRG PRRHLLTTGWS
Sbjct: 187 HGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQPRRHLLTTGWSA 246
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG+L +G+RRA + TG+ F G
Sbjct: 247 FVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQ-------------------LKTGSAFPG 287
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
Y ++ G + A A+A G F +
Sbjct: 288 L---------------------YSQCSNLGT-----------LANVAHAVATKGM-FRIY 314
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S EF V ++ + G+RFKM +E+ED++ + G I+ ADP+
Sbjct: 315 YNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRYESEDAAERR-YTGIITGTGDADPM- 372
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
W S W+ L V WD+ + RVSPW +EL S+ HL+ +PA K+L+
Sbjct: 373 WRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSASGSHLA--TPASKRLK 422
>gi|304308213|gb|ADL70419.1| auxin response factor 16 [Arabidopsis thaliana]
gi|304308215|gb|ADL70420.1| auxin response factor 16 [Arabidopsis thaliana]
gi|304308223|gb|ADL70424.1| auxin response factor 16 [Arabidopsis thaliana]
gi|304308225|gb|ADL70425.1| auxin response factor 16 [Arabidopsis thaliana]
gi|304308229|gb|ADL70427.1| auxin response factor 16 [Arabidopsis thaliana]
gi|304308235|gb|ADL70430.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 291
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/315 (47%), Positives = 192/315 (60%), Gaps = 31/315 (9%)
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
SRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I
Sbjct: 1 SRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP 60
Query: 405 LSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--- 460
L+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR
Sbjct: 61 LTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNA 120
Query: 461 HAQFGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGN 518
H +G+SSSD H N+ S + R+ D +E C LTMG
Sbjct: 121 HQYYGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGT 173
Query: 519 SNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
+ N KS KK +LFG+ I E+Q+S S D + ++ +
Sbjct: 174 TPCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQIS 216
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
SG +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYE
Sbjct: 217 SGGSNQNGVAGRELSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYE 276
Query: 638 ELYRRLAIMFGIERS 652
EL R+L+ MFGI++S
Sbjct: 277 ELSRKLSDMFGIKKS 291
>gi|304308211|gb|ADL70418.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 292
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 192/316 (60%), Gaps = 32/316 (10%)
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
SRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I
Sbjct: 1 SRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP 60
Query: 405 LSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--- 460
L+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR
Sbjct: 61 LTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNA 120
Query: 461 HAQFGISSSDFH---VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMG 517
H +G+SSSD H +N S + R+ D +E C LTMG
Sbjct: 121 HQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMG 173
Query: 518 NSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSD 577
+ N KS KK +LFG+ I E+Q+S S D + ++ +
Sbjct: 174 TTPCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQI 216
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
SG +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SY
Sbjct: 217 SSGGSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSY 276
Query: 637 EELYRRLAIMFGIERS 652
EEL R+L+ MFGI++S
Sbjct: 277 EELSRKLSDMFGIKKS 292
>gi|304308233|gb|ADL70429.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 292
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 150/316 (47%), Positives = 192/316 (60%), Gaps = 32/316 (10%)
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
SRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I
Sbjct: 1 SRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP 60
Query: 405 LSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--- 460
L+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR
Sbjct: 61 LTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNA 120
Query: 461 HAQFGISSSDFH---VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMG 517
H +G+SSSD H +N S + R+ D +E C LTMG
Sbjct: 121 HQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMG 173
Query: 518 NSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSD 577
+ N KS KK +LFG+ I E+Q+S S D + ++ +
Sbjct: 174 TTPCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTTN--------------IEKTQI 216
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
SG +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SY
Sbjct: 217 SSGGSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSY 276
Query: 637 EELYRRLAIMFGIERS 652
EEL R+L+ MFGI++S
Sbjct: 277 EELSRKLSDMFGIKKS 292
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 216/423 (51%), Gaps = 76/423 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG + +P S V Y PQGH EH +G +++++PP +FCRV + AD+
Sbjct: 30 ELWHACAGPVGPLPRKGSAVVYLPQGHLEH-IGDAG-SAAAKVPPHVFCRVVDVNLQADA 87
Query: 71 ETDEVYAKIKLVPIPANEIDFED---------NNLSLNSVGSDSESEK-----PASFAKT 116
TDEVYA++ L +D E+ N + + G D+++ K P F KT
Sbjct: 88 ATDEVYAQVTLA------VDNEESKRRVRDGENEEARDGDGEDADAMKRLPRIPHMFCKT 141
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRH
Sbjct: 142 LTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYRGQPRRH 201
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FVN+KKLV+GD+++FLR +DG+L +G+RR + + + +P+ N + G
Sbjct: 202 LLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQ-LKNVSPFPAP-HNQDPGHS 259
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
GN V A+A+ +
Sbjct: 260 SLGN-----------------------------------------------VAHALAVKS 272
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+ F V Y PR EF + ++ + GMRFKM +E ED+S G I
Sbjct: 273 T---FHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRFKMRYENEDASE-RRSTGIIIG 328
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ +DP S+ S W+ L V WD+ + RVSPW +EL + HLS R K
Sbjct: 329 SRESDPKSY-GSKWKCLVVRWDDDIEGRRPNRVSPWDIELTGAVSGSHLSIHHSKRMKPC 387
Query: 417 LPQ 419
LPQ
Sbjct: 388 LPQ 390
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 157/427 (36%), Positives = 221/427 (51%), Gaps = 67/427 (15%)
Query: 3 EVEKSI-DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPP 55
EVEK + + +LWHACAG +V +P + S YFPQGH+E S N PS +P
Sbjct: 14 EVEKRVLNSELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPA 73
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FA 114
+ C++ ++ AD ETDEVYA++ L P+ E + + S++P + F
Sbjct: 74 QLICQLHNVTMHADVETDEVYAQMTLQPLSPQE-----QKAAYLPADMGTPSKQPTNYFC 128
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+
Sbjct: 129 KTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPK 188
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 189 RHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR---PQTVMPSSVLSSDSM 245
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
G + ++ + +S T R P + +A
Sbjct: 246 HL-----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA- 281
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
K + VYY R S GMRF+M FETE+SS + +MGTI
Sbjct: 282 ----KYLKAVYYTRVS--------------------VGMRFRMMFETEESS-VRRYMGTI 316
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ + D + WPNS WR ++V WDE + RVS W +E ++ P + SPF P R K
Sbjct: 317 TGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLTTFPT-YPSPF-PLRLK 374
Query: 415 LRLPQQL 421
P L
Sbjct: 375 RPWPPGL 381
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL L+ MFG+E D L +++ D +
Sbjct: 754 VKVY-KSGSFGRSLDITKFSSYNELRSELSRMFGLEGQLEDPLRSGWQLVFIDRENDVLL 812
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD P+ +F+ S + IL +G+
Sbjct: 813 LGDGPWPEFVNSVWYIKILSPQEVQQMGK 841
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 249/504 (49%), Gaps = 87/504 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E S N + IP P +
Sbjct: 17 KKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E + L S S++P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLSPQE----QKEVCLLPAELGSPSKQPTNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q ++A+D+HG WKFRHI+RG P+RHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+L+AGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 193 LTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANR---PQTIMPSSVLSSDSMHI- 248
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + + LA
Sbjct: 249 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFV--IPLAKY 284
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K VY+ R V MR L FETE+SS + +MGTI+ +
Sbjct: 285 AK---AVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITGI 320
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K
Sbjct: 321 SDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPW 378
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGP---SSPLCCL-SDNTSAGIQGARHAQFGIS------ 467
P L P F + G +SPL L D GIQ +G++
Sbjct: 379 PSAL----------PSFHAHKDGDMSINSPLMWLRGDIGDQGIQSLNFQGYGLTPWMQPR 428
Query: 468 --SSDFHVNNKLQSGLFLSSLQRF 489
+S + + +Q + +SLQ
Sbjct: 429 LDASMLGLQSNMQQAIAAASLQEL 452
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 625 GRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDFM 679
GR+LD++ SSY+EL L MFG+E D L +++ D + GD+P+ +F+
Sbjct: 789 GRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFV 848
Query: 680 KSAKRLTIL 688
+ + IL
Sbjct: 849 NNVWYIKIL 857
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 148/419 (35%), Positives = 214/419 (51%), Gaps = 63/419 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----- 56
++ + ++ +LW+ACAG +V +P N VFYFPQGH E S + + ++P
Sbjct: 35 RDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSK 94
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV ++ A+ ETDEV+A+I L+P E + +++ + SF KT
Sbjct: 95 ILCRVINVHLKAEPETDEVFAQITLLP----EANQDEHAVDKEPPPPPPRRFHVHSFCKT 150
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 210
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 211 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGN---VPSSVISSH---- 263
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 264 ------------------------SMHLG---------------------VLATAWHAIS 278
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ + GMRFKM FE E++ F GTI
Sbjct: 279 TGTMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPE-QRFTGTIIG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS-PARKK 414
+ ADP W +S WR L+V WDE + ++VSPW +E P ++ P + P R +
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPR 396
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 215/709 (30%), Positives = 314/709 (44%), Gaps = 134/709 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P + V+YFPQGH E S++ PS + +P I C+V ++
Sbjct: 87 ELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVVNV 145
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
A+S+TDEVYA+I L+P NE+ D L + SF KTLT SD +
Sbjct: 146 VLRAESDTDEVYAQITLLPESNQNEVTSPDPPLP------EPTRCNVHSFCKTLTASDTS 199
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 200 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 259
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 260 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH----------- 305
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L ++ A ++G F V
Sbjct: 306 -----------------SMHLG---------------------VLATASHAISTGTLFSV 327
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S F V + A GMRFKM FE E+ S F GTI +
Sbjct: 328 FYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERS-FSGTIVGLGDNASP 386
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS--PARKKLRLPQQL 421
W NS WR L+V WDEP + +VS W +E P++ +P S P ++ R P+
Sbjct: 387 GWANSEWRSLKVQWDEPSSILRPDKVSAWELE-----PLVASNPLSTQPTQRNKR-PRPT 440
Query: 422 DFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSD---FHVNNKLQ 478
P L P SS + + +F ++S+ F+ N
Sbjct: 441 VLPSSSPDATVLGGWKPTVESSTFSYAEPQRGRDLYSS--PKFSTAASNSLGFNAN---- 494
Query: 479 SGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFG 538
SSL + N+ +TN EN+ + G + + +EK +N ++ LFG
Sbjct: 495 -----SSLGAVSSNN------YWCNTNRVENIMDPSSHGANREPVEKKQN-SRNGCRLFG 542
Query: 539 QPIRTEQQISHSCSDDVVSQVLGKSSSD----------GHSDKVKASSDGSGSTHEQRIS 588
Q+LG S+ D G D++ D H + +
Sbjct: 543 ------------------IQLLGNSNVDEASPVSTPKMGGEDRLVPPIDTDFEQHSEPSN 584
Query: 589 IEKSSSSEFFWNRSFQVTESGLDTGH------CKVFLESEDVGRTLDLSVLSSYEELYRR 642
I +S + S L++ KV ++ VGR +DL+ + Y++L R+
Sbjct: 585 IHRSDIPSISCDADKSCLISPLESQSRQIRSCTKVHMQGIAVGRAVDLTRFNQYDDLLRK 644
Query: 643 LAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L MF IE S V+Y D + GD+P+++F +++ I
Sbjct: 645 LEEMFDIEGELCGSLKKWQVVYTDDEDDMMLVGDDPWNEFCSMVRKIFI 693
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/416 (36%), Positives = 209/416 (50%), Gaps = 75/416 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW +CAG +V +P V+YFPQGH E S N + + +P I CRV ++
Sbjct: 43 ELWRSCAGPLVTVPREGELVYYFPQGHIEQVEASTNQVADQQMPLYNLPSKILCRVVNVL 102
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SFAKTLTQS 120
A+ +TDEVYA++ L+P P N N+V + P SF KTLT S
Sbjct: 103 LKAEPDTDEVYAQVTLMPEP---------NQDENAVKKEPMRPPPPRFHVHSFCKTLTAS 153
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R A+ P+LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +
Sbjct: 154 DTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQS 213
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 214 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNA---PSSVISSH-------- 262
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+M+L VL A K
Sbjct: 263 --------------------SMHLG----------------------VLATAWHAIQTKT 280
Query: 301 FEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
VYY PR S EF V +++ ++ GMRFKM FE E++ F GTI ++
Sbjct: 281 MFTVYYKPRTSPAEFIVPYDHYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIED 339
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS-PARKK 414
ADP W S WR L+V WDE + RVSPW +E + P +++ P + P R +
Sbjct: 340 ADPQRWLESKWRCLKVRWDENSSIPRPDRVSPWKIEPALSPPALNVPPVARPKRPR 395
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/472 (35%), Positives = 234/472 (49%), Gaps = 77/472 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 17 KRCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ ++ AD ETDEVYA++ L P+ E + L + S + F KTLT
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLNPQE----QKDAFLPADLGTSGKQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHI-- 247
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G + ++ + +S T R P + +A
Sbjct: 248 ---------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA----- 281
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
K + VY+ R V MR L FETE+SS + +MGTI+ +
Sbjct: 282 KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 321 DLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWP 378
Query: 419 QQLDFPFDGQFTMPLFSGNP---LGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
L P GN LG S+PL L D +Q G+S
Sbjct: 379 PGL----------PSLHGNKDDDLGMSAPLMWLRDGADRNMQSLNFQGLGVS 420
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEP 674
+S GR+L+++ SSY EL LA MFG+E D L ++Y D + GD+P
Sbjct: 788 KSGSFGRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSGWQLIYIDRDNDVLLLGDDP 847
Query: 675 FSDFMKSAKRLTILMGSGSDSVGRTWITGMRT 706
+ DF+K+A + IL +G+ I +RT
Sbjct: 848 WPDFVKNASCIKILSPQELQQMGKQGIELLRT 879
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 172/499 (34%), Positives = 239/499 (47%), Gaps = 98/499 (19%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--FPSSSRIPPLIFCRVSSLK 65
ID +W ACA + +IP + + V YFP+GHAE + PS+ R C ++++
Sbjct: 24 IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHR---FFLCTITAVD 80
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
AD+ T E YA I L+P+ + + +++ES++ +AK LTQSDANNG
Sbjct: 81 LSADTTTGEPYATISLLPLRHDAP----APAPAAAELAEAESQEFRYYAKQLTQSDANNG 136
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR CA+ IFP L+ DPPVQ++ D+ G+ W+FRHIYRGTPRRHLLTTGWS F
Sbjct: 137 GGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTGWSKF 196
Query: 186 VNQKKLVAGDSIVFL----RAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
VN K+LVAGD++VF+ A + L VG+RRA + G
Sbjct: 197 VNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAARYSG---------------------- 234
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
S+ N R GRV+P+ V+EAV LAA F
Sbjct: 235 -----------------------------ESACNAR---GRVQPQEVMEAVRLAAEQAAF 262
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFK-MAFETEDSSRISWFMGTISSVQVA 360
V YYPR EF V V + W CGM+ + E ED+ R++W GT+++++
Sbjct: 263 RVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAEDTRRLAWLNGTLTNLRH- 321
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKR--VSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
WR L+V WD ++K V+PW V+ V F P L++
Sbjct: 322 ------QQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVD---------FPPLPMGLKI- 365
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR----HAQFGISSSDFHVN 474
+ + P+ +G+ L L A IQGAR HA I SS
Sbjct: 366 ------SNNNISAPVCNGDSLLVPPILMHPQPQPPADIQGARHNNGHAYADIPSSSTPSM 419
Query: 475 NKLQSGLFLSSLQRFTPNS 493
+ Q LF LQ P++
Sbjct: 420 VRTQQ-LFPRGLQILVPHT 437
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 161/422 (38%), Positives = 213/422 (50%), Gaps = 76/422 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E S F S +P P IFC+V +++
Sbjct: 41 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQLASSSPF-SHRDMPNFDLHPQIFCKVVNVQ 99
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFED------NNLSLNSVGSDSESEK--PASFAKTL 117
LA+ E DEVY ++ L+P P E+ +D L ++ G D+ K P F KTL
Sbjct: 100 LLANRENDEVYTRLTLLPQP--EVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKTL 157
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHL
Sbjct: 158 TASDTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHL 217
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+QK LV+GD+++FLR + G+L +GI ++ N P S V
Sbjct: 218 LTTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGI---RRAARPRNGLPDS---------V 265
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
TG ++N + L V+ A S
Sbjct: 266 TG------------KQNSLPS-----------------------------ALSLVSNAIS 284
Query: 298 GKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTI 354
K F V Y PRA+ F V ++ G RFKM FE +DS R S G +
Sbjct: 285 TKSVFTVSYSPRATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPERRCS---GVV 341
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ DP WPNS WR L V WDE + + +RVSPW ++ ++P + + SP KK
Sbjct: 342 TGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASVSLPPLIIQS-SPRLKK 400
Query: 415 LR 416
LR
Sbjct: 401 LR 402
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L+ Y +L L +F +E + +LY D+ + G
Sbjct: 599 KVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSENDVMVVG 658
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F A ++ I
Sbjct: 659 DDPWLEFCNVATKIHI 674
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/432 (38%), Positives = 217/432 (50%), Gaps = 74/432 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR--IPPLIFCRVSSLKFLA 68
+LWHACAG V +P S + Y PQGH G + + +PP + CRV ++ A
Sbjct: 26 ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGAAPPVPPHVACRVLDVELCA 85
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD--------SESEKPASFAKTLTQS 120
D+ TDEVYA++ LV + + NL + G + + P F KTLT S
Sbjct: 86 DAATDEVYARLALVAV----CEMSRQNLGGTAWGEEDMEFGSGEKKPRMPHMFCKTLTAS 141
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTT 201
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS+FVN+KKLV+GD+++FLR DG+L +GIRRA +
Sbjct: 202 GWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQ------------------------ 237
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK- 299
LR E+ A N S ++R + L AVA + +
Sbjct: 238 --------LRNEDLFKAVN-------------SSDSR--------QRTLSAVASSFRNRS 268
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V + PR+ EF V ++ GMRFK+++E+ED++ S G IS V
Sbjct: 269 TFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANERS--TGMISGVSE 326
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM-PVIH-LSPFSPARKKLRL 417
DPI WP S WR L V WD + R+SPW +E V M V H LS + R KL
Sbjct: 327 VDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIERVGGMNSVTHSLSASNSKRTKLSF 386
Query: 418 PQ-QLDFP-FDG 427
P+ LD P DG
Sbjct: 387 PESNLDAPVIDG 398
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 153/410 (37%), Positives = 210/410 (51%), Gaps = 62/410 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL--IFCRVSSLKFLA 68
+LWHACAG + +P V Y PQGH EH LG +++ +FCRV + LA
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEH-LGDAPAAAAAAAAVPPHVFCRVVDVTLLA 96
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE--SEKPASFAKTLTQSDANNGG 126
D+ TDEVYA++ LVP E+ ++ + + P F KTLT SD + G
Sbjct: 97 DAATDEVYAQLSLVP-EKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHG 155
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRHLLTTGWS FV
Sbjct: 156 GFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFV 215
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFS 246
N+KKLV+GD+++FLR DG+L +G+RRA + + G+ +P+
Sbjct: 216 NKKKLVSGDAVLFLRGDDGELRLGVRRAAQ-LKNGSAFPA-------------------- 254
Query: 247 CFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYY 306
+N N G V + E+V F + Y
Sbjct: 255 ----------------------LYNQCSNL-GTLANVAHAVATESV--------FNIYYN 283
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
PR S EF V ++ + G+RFKM +E+ED+S + G I+ DP+ W
Sbjct: 284 PRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDASE-RRYTGIITGSGDTDPM-WH 341
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
S W+ L V WD+ + RVSPW +EL S++ HLS +P K+L+
Sbjct: 342 GSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLS--TPHSKRLK 389
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 150/410 (36%), Positives = 210/410 (51%), Gaps = 62/410 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + V+YFPQGH E S+N ++++ +P + CRV +++
Sbjct: 25 ELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLYDLPSKLLCRVLNVE 84
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
A+++TDEVYA++ L+P P +S + +PA SF KTLT SD +
Sbjct: 85 LKAEADTDEVYAQVMLMPEPEQSEAAATTTEKSSSATGGTMPARPAVRSFCKTLTASDTS 144
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL +GWS
Sbjct: 145 THGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQSGWS 204
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ K+LVAGD+ +FLR + G+L VG+RRA + + SN S V
Sbjct: 205 VFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQL------------SNIASSVIS---- 248
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+ +M+L + + NT+ F V
Sbjct: 249 ---------------SHSMHLGVLATAWHAINTKTM---------------------FTV 272
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF + +++ + G RFKM FE E++ F GTI D +
Sbjct: 273 YYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGEEAPE-QRFTGTIVGSDNLDQL 331
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
WP S WR L+V WDE + RVSPW +E S+ PV L P S A++
Sbjct: 332 -WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASSPPVNPL-PLSRAKR 379
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Query: 600 NRSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-- 656
++ Q G T C KV + +GR++DLS Y+EL L MF + M S
Sbjct: 683 SKDVQSKSHGASTRSCTKVHKQGVALGRSVDLSKFVDYDELTAELDKMFDFDGELMSSNK 742
Query: 657 --HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
++Y D G + GD+P+ +F +++ I
Sbjct: 743 NWQIVYTDNEGDMMLVGDDPWEEFCSMVRKICI 775
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 150/416 (36%), Positives = 207/416 (49%), Gaps = 77/416 (18%)
Query: 1 MKEVE------KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP 54
+KE++ K+I+ +LW+ACAG +V +P + S V+YFPQGH+E S ++S+IP
Sbjct: 29 LKEIQDHSGTRKTINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIP 88
Query: 55 PL------IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE 108
+ C+V ++ AD +TDE+YA++ L P+ + + F + L SE
Sbjct: 89 NYPNLASQLLCQVHNVTLHADRDTDEIYAQMSLQPVNSEKDVFPIPDFGLKPSKHPSEF- 147
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
F KTLT SD + GGFSVPR AE +FP LDYT PP Q +V +D+H W FRHI
Sbjct: 148 ----FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHI 203
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSG 228
YRG P+RHLLTTGWS FV K+L AGDS++
Sbjct: 204 YRGQPKRHLLTTGWSLFVGSKRLKAGDSVL------------------------------ 233
Query: 229 WNSNNGSCVTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
F+R+E++++ R N + S S ++ G
Sbjct: 234 -------------------FIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMHIG----- 269
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDS 344
++ A AA+ PF + Y PRA EF + A KA GMRF M FETE+S
Sbjct: 270 -VLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEES 328
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 400
+ +MGTI + DP+ WP S WR LQV WDEP RVS W +E N+
Sbjct: 329 GK-RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIETPENL 383
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S +D + + D SG T + +K + + N S+Q
Sbjct: 778 STSQDVQSQITSVSLADSQAFSQQDFPDSSGGTSSSNVDFDKGN---YMQNNSWQQVAPR 834
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-------VLYQD 662
+ T + KV ++ VGR++D+S +YEEL + MFG+E +L++ ++Y D
Sbjct: 835 VRT-YTKV-QKAGSVGRSIDVSGFKNYEELCSAIECMFGLE--GLLNNPRESGWKLVYVD 890
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 891 YENDVLLIGDDPWEEFVGCVRCIRIL 916
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 221/437 (50%), Gaps = 68/437 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+KS++ +LWHACAG +V +P + + V YFPQGH+E S N PS +PP +
Sbjct: 6 KKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLI 65
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E ++ L + S++P++ F KTL
Sbjct: 66 CQLHNVTMDADVETDEVYAQMTLQPLTPQE----QKDVCLLPAELGTLSKQPSNYFCKTL 121
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PPVQ ++ KD+HG WKFRHI+RG P+RHL
Sbjct: 122 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHL 181
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K R GD + I WN NN +
Sbjct: 182 LTTGWSVFVSAK-----------RLVAGDSVIFI-----------------WNENNQLLL 213
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R N S S ++ G ++ A AA+
Sbjct: 214 G------------------IRRANRPQTVLPSSVLSSDSMHIG------LLAAAAHAAAT 249
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + + PRA EF + A KA GMRF+M FETE+SS I +MGTI+
Sbjct: 250 NSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESS-IRRYMGTITG 308
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP+ WPNS W+ ++V WDE + RVS W +E ++ P ++ SPFS K+
Sbjct: 309 IGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFSLRLKRPW 367
Query: 417 LPQQLDFP--FDGQFTM 431
P FP +G TM
Sbjct: 368 PPGLPSFPGLSNGDMTM 384
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +SE GR+LD+S SSY EL LA MFG+ ERS +++ D +
Sbjct: 737 VKVY-KSESFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGW--QLVFVDRENDV 793
Query: 668 KRTGDEPFSDFMKSAKRLTIL 688
GD+P+ +F+ S + IL
Sbjct: 794 LLLGDDPWHEFVNSVWYIKIL 814
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 221/437 (50%), Gaps = 68/437 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+KS++ +LWHACAG +V +P + + V YFPQGH+E S N PS +PP +
Sbjct: 19 KKSLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E ++ L + S++P++ F KTL
Sbjct: 79 CQLHNVTMDADVETDEVYAQMTLQPLTPQE----QKDVCLLPAELGTLSKQPSNYFCKTL 134
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PPVQ ++ KD+HG WKFRHI+RG P+RHL
Sbjct: 135 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPKRHL 194
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K R GD + I WN NN +
Sbjct: 195 LTTGWSVFVSAK-----------RLVAGDSVIFI-----------------WNENNQLLL 226
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R N S S ++ G ++ A AA+
Sbjct: 227 G------------------IRRANRPQTVLPSSVLSSDSMHIG------LLAAAAHAAAT 262
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + + PRA EF + A KA GMRF+M FETE+SS I +MGTI+
Sbjct: 263 NSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESS-IRRYMGTITG 321
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP+ WPNS W+ ++V WDE + RVS W +E ++ P ++ SPFS K+
Sbjct: 322 IGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPFSLRLKRPW 380
Query: 417 LPQQLDFP--FDGQFTM 431
P FP +G TM
Sbjct: 381 PPGLPSFPGLSNGDMTM 397
Score = 46.2 bits (108), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 10/81 (12%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +SE GR+LD+S SSY EL LA MFG+ ERS +++ D +
Sbjct: 750 VKVY-KSESFGRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGW--QLVFVDRENDV 806
Query: 668 KRTGDEPFSDFMKSAKRLTIL 688
GD+P+ +F+ S + IL
Sbjct: 807 LLLGDDPWHEFVNSVWYIKIL 827
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 244 bits (624), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 219/423 (51%), Gaps = 75/423 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLI 57
V++ +P+LWHACAG +V +P + + V YFPQGH+E S + PS +PP +
Sbjct: 20 VKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHL 79
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C++ ++ AD+ETDEVYA++ L P+ A E D + ++ +G ++ +P+ F KT
Sbjct: 80 VCQLHNITLHADTETDEVYAQMTLQPMNAQEKD----SFMVSDLGR--QNRQPSEYFCKT 133
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFS+PR AE +FP LD++ PP Q +VA+D+H W+FRHIYRG PRRH
Sbjct: 134 LTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRH 193
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L Q GD + IR K G
Sbjct: 194 LLTTGWSVFVSAKRL-----------QTGDAVLFIRDEK------------------GQL 224
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA- 295
+ G +R N+ + ++L S S +L A A A
Sbjct: 225 LLG---------IRRA-NRQQASMPLSLLSTDSMYIG--------------ILAAAAHAN 260
Query: 296 ASGKPFEVVYYPRASTPEFCVKAS----AVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
++ F + Y PRAS EF + S AV M+V GMRF+M FETE+S I
Sbjct: 261 STSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVS--PGMRFRMQFETEESG-IRRHT 317
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI DP+ WPNS WR L+V WDEP + +R+S W +E S P + SP
Sbjct: 318 GTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPAST-PYLVCSPSFTF 376
Query: 412 RKK 414
R K
Sbjct: 377 RSK 379
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 28/200 (14%)
Query: 498 GILTSHTNSSENLSCLLTMGNSNQNLEKSE-NIKKHQFLLFGQPIRTEQQISHSC---SD 553
G + S + + ++ LT ++ Q E+ + LLFG I E S S
Sbjct: 606 GPVFSINDIEQGVTAGLTFKDAQQQQEQDTLPLDSRSHLLFGVSIEPECITPSSQGPKSK 665
Query: 554 DVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTG 613
D +VLG +SSD H SSD T E+ +++SSS++ R+F
Sbjct: 666 DGQQRVLGSTSSDLH-----LSSDNG--TLEEPAYLQRSSSAQPMLPRTF---------- 708
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIK 668
KV+ ++ VGR+LDL+ L+ Y+ L LA MFG+E H +++ D +
Sbjct: 709 -TKVY-KTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNENDVL 766
Query: 669 RTGDEPFSDFMKSAKRLTIL 688
GD+P+ +F+ + + I+
Sbjct: 767 LVGDDPWEEFVSCVRCIKIM 786
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 244 bits (624), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 214/419 (51%), Gaps = 63/419 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----- 56
++ + ++ +LW+ACAG +V +P N VFYFPQGH E S + + ++P
Sbjct: 35 RDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSK 94
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV ++ A+ +TDEV+A+I L+P E + +++ + SF KT
Sbjct: 95 ILCRVINVHLKAEPDTDEVFAQITLLP----EANQDEHAVDKEPPPPPPRRFHVHSFCKT 150
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 210
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 211 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGN---VPSSVISSH---- 263
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 264 ------------------------SMHLG---------------------VLATAWHAIS 278
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ + GMRFKM FE E++ F GTI
Sbjct: 279 TGTLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPE-QRFTGTIIG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS-PARKK 414
+ ADP W +S WR L+V WDE + ++VSPW +E P ++ P + P R +
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPR 396
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 219/423 (51%), Gaps = 75/423 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLI 57
V++ +P+LWHACAG +V +P + + V YFPQGH+E S + PS +PP +
Sbjct: 20 VKRGPNPELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHL 79
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C++ ++ AD+ETDEVYA++ L P+ A E D + ++ +G ++ +P+ F KT
Sbjct: 80 VCQLHNITLHADTETDEVYAQMTLQPMNAQEKD----SFMVSDLGR--QNRQPSEYFCKT 133
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFS+PR AE +FP LD++ PP Q +VA+D+H W+FRHIYRG PRRH
Sbjct: 134 LTASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRH 193
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L Q GD + IR K G
Sbjct: 194 LLTTGWSVFVSAKRL-----------QTGDAVLFIRDEK------------------GQL 224
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA- 295
+ G +R N+ + ++L S S +L A A A
Sbjct: 225 LLG---------IRRA-NRQQASMPLSLLSTDSMYIG--------------ILAAAAHAN 260
Query: 296 ASGKPFEVVYYPRASTPEFCVKAS----AVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
++ F + Y PRAS EF + S AV M+V GMRF+M FETE+S I
Sbjct: 261 STSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVS--PGMRFRMQFETEESG-IRRHT 317
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI DP+ WPNS WR L+V WDEP + +R+S W +E S P + SP
Sbjct: 318 GTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIEPAST-PYLVCSPSFTF 376
Query: 412 RKK 414
R K
Sbjct: 377 RSK 379
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 28/200 (14%)
Query: 498 GILTSHTNSSENLSCLLTMGNSNQNLEKSE-NIKKHQFLLFGQPIRTEQQISHSC---SD 553
G + S + + ++ LT ++ Q E+ + LLFG I E S S
Sbjct: 606 GAVFSINDIEQGVTAGLTFKDAQQQQEQDTLPLDSRSHLLFGVSIEPECITPSSQGPKSK 665
Query: 554 DVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTG 613
D +VL ++SD H SSD T E+ +++SSS++ R+F
Sbjct: 666 DGQQRVLSSTASDLH-----LSSDNG--TLEEPAYLQRSSSAQHMLPRTF---------- 708
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIK 668
KV+ ++ VGR+LDL+ L+ Y+ L LA MFG+E H +++ D +
Sbjct: 709 -TKVY-KTGSVGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNENDVL 766
Query: 669 RTGDEPFSDFMKSAKRLTIL 688
GD+P+ +F+ + + I+
Sbjct: 767 LVGDDPWEEFVSCVRCIKIM 786
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 196/395 (49%), Gaps = 63/395 (15%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRV 61
++D ++WHACAG +V +P + V YFPQGH E S N + ++P I+CR+
Sbjct: 32 ALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLPSQIYCRL 91
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
+L AD ETDEV+A++ LVP E + D ++ S K + F K LT SD
Sbjct: 92 LNLTLGADRETDEVFAQMTLVP----ENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSSD 147
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE P LDY PP Q +VAKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 148 TSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 207
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+QKKLVA GD + +R +NG G
Sbjct: 208 WSVFVSQKKLVA-----------GDAVLFLR------------------GDNGELRIG-- 236
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP- 300
R NS S + + + G VL A A A S K
Sbjct: 237 ---------------VRRAVRQQNSVTSSSLLSSHSMHLG------VLAAAAHAVSTKTM 275
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PRAS EF V A + GMRFKM FETE+SS +MGTI+ V
Sbjct: 276 FTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERR-YMGTITGVGDI 334
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
D W NS WR LQV WDE + +RVSPW +E
Sbjct: 335 DSDRWINSKWRCLQVGWDEQTANERQERVSPWEIE 369
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERS----DMLSHVLYQDASGAIKRTG 671
KV L+ VGR +DLS S Y EL L +FG++ + D V+Y D G + G
Sbjct: 667 KVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLDNALDDPDSGWQVVYTDNEGDMLLVG 726
Query: 672 DEPFSDFMKSAKRLTIL 688
D+P+ +F + + IL
Sbjct: 727 DDPWQEFCNMVRNIRIL 743
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 214/419 (51%), Gaps = 63/419 (15%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----- 56
++ + ++ +LW+ACAG +V +P N VFYFPQGH E S + + ++P
Sbjct: 35 RDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSK 94
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV ++ A+ +TDEV+A+I L+P E + +++ + SF KT
Sbjct: 95 ILCRVINVHLKAEPDTDEVFAQITLLP----EANQDEHAVDKEPPPPPPRRFHVHSFCKT 150
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 151 LTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 210
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 211 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGN---VPSSVISSH---- 263
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 264 ------------------------SMHLG---------------------VLATAWHAIS 278
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ + GMRFKM FE E++ F GTI
Sbjct: 279 TGTLFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPE-QRFTGTIIG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS-PARKK 414
+ ADP W +S WR L+V WDE + ++VSPW +E P ++ P + P R +
Sbjct: 338 CEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPR 396
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 169/477 (35%), Positives = 243/477 (50%), Gaps = 81/477 (16%)
Query: 2 KEVEKSI-DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+E EK + D +LWHACAG +V +P + S V YFPQGH+E S N P+ +P
Sbjct: 13 QEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLP 72
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-F 113
P + C++ ++ AD ETDEVYA++ L P+ + ++ N + + S++P + F
Sbjct: 73 PQLICQLHNMTMHADVETDEVYAQMTLQPL-----NPQEQNEAYLPAELGTASKQPTNYF 127
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+HG WKFRHI+RG P
Sbjct: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQP 187
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDS 244
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
G + ++ + +S T R P + +A
Sbjct: 245 MHL-----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA 281
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
K + VY+ R V MR L FETE+SS + +MGT
Sbjct: 282 -----KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGT 315
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I+ + DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ S F P R
Sbjct: 316 ITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSSF-PLRL 373
Query: 414 KLRLPQQLDFPFDGQFTMPLFSG---NPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
K P L P F G + G +SPL L D T G+Q G++
Sbjct: 374 KRPWPPGL----------PSFHGMKDDDFGLNSPLLWLRD-TDRGLQSLNFQGIGVN 419
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 167/476 (35%), Positives = 236/476 (49%), Gaps = 81/476 (17%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH+E S N PS +PP
Sbjct: 36 EEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQ 95
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ET+EVYA++ L P+ E+ L V S++P + F K
Sbjct: 96 LICQLHNVTMQADAETEEVYAQMTLQPLNPQELKDPYLPAELGLV-----SKQPTNYFCK 150
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++A D+HG WKFRHI+RG P+R
Sbjct: 151 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKR 210
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S+
Sbjct: 211 HLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANR---PQTVMPSSVLSSD--- 264
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGN---GGRVKPEMVLEAV 292
+ ++ L + + +S N+R R P + +
Sbjct: 265 -----------------------SMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPL 301
Query: 293 ALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
A K + VY+ R + MR L FETE+SS + +MG
Sbjct: 302 A-----KYVKAVYHTR------------ISVGMRFRML--------FETEESS-VRRYMG 335
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
TI+ + D + WPNS WR ++V WDE RVS W +E ++ P + SPF P R
Sbjct: 336 TITGISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPT-YTSPF-PLR 393
Query: 413 KKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISS 468
K P L L G ++ L L D T+ G Q G++S
Sbjct: 394 LKRPWPTGLP---------SLHGGKDDDLANSLMWLRDTTNPGFQSLNFGGLGMNS 440
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL R L +FG+E D L +++ D +
Sbjct: 795 VKVY-KSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLL 853
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F + + IL +G+
Sbjct: 854 VGDDPWQEFASTVSCIKILSPQEVQQMGK 882
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/395 (40%), Positives = 196/395 (49%), Gaps = 63/395 (15%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRV 61
++D ++WHACAG +V +P + V YFPQGH E S N + ++P I+CR+
Sbjct: 32 ALDSEVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLPSQIYCRL 91
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
+L AD ETDEV+A++ LVP E + D ++ S K + F K LT SD
Sbjct: 92 LNLTLGADRETDEVFAQMTLVP----ENEQGDQSIDTEDELSPCPKRKLSMFCKNLTSSD 147
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE P LDY PP Q +VAKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 148 TSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 207
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+QKKLVA GD + +R +NG G
Sbjct: 208 WSVFVSQKKLVA-----------GDAVLFLR------------------GDNGELRIG-- 236
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP- 300
R NS S + + + G VL A A A S K
Sbjct: 237 ---------------VRRAVRQQNSVTSSSLLSSHSMHLG------VLAAAAHAVSTKTM 275
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PRAS EF V A + GMRFKM FETE+SS +MGTI+ V
Sbjct: 276 FTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERR-YMGTITGVGDI 334
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
D W NS WR LQV WDE + +RVSPW +E
Sbjct: 335 DSDRWINSKWRCLQVGWDEQTANERQERVSPWEIE 369
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/398 (36%), Positives = 199/398 (50%), Gaps = 69/398 (17%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD ++DE+YA++ L P+ + F + + GS +E F KTLT SD
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGGSKHPTE---FFCKTLTASD 167
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE +FP LDYTA PP Q +V +D+H W FRHIYRG P+RHLLTTG
Sbjct: 168 TSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTG 227
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV K+L AGDS++
Sbjct: 228 WSLFVGSKRLRAGDSVL------------------------------------------- 244
Query: 242 FGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 245 ------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATANR 292
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSV 357
PF + Y PRA EF + + + A+ L GMRF M FETEDS + +MGTI +
Sbjct: 293 TPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVGI 351
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 352 SDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 389
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S + DV SQ+ S +D + + D SG T +++ SS S +
Sbjct: 730 SFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDSS--LLQNSKGSSWKK 787
Query: 610 LDTGHCKVFLESED---VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-------VL 659
+ T + + + + VGR++D++ Y+EL + MFG+E +L+ ++
Sbjct: 788 IATPRVRTYTKVQKTGSVGRSIDVTSFKDYKELKSAIECMFGLE--GLLTQPQSSGWKLV 845
Query: 660 YQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
Y D + GD+P+ +F+ + + IL
Sbjct: 846 YVDYESDVLLVGDDPWEEFVGCVRCIRIL 874
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/405 (37%), Positives = 216/405 (53%), Gaps = 65/405 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
K ++ +LWHACAG +V +P + S YFPQGH+E S N P+ +P + C
Sbjct: 3 KCLNSELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQLIC 62
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ ++ AD ETDEVYA++ L P+ D +D L +G+ S++P++ F KTLT
Sbjct: 63 QLHNVTMHADVETDEVYAQMTLQPLSPE--DKKDAYLLPAELGT--ASKQPSNYFCKTLT 118
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 178
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 179 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHI-- 233
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP-EMVLEAVALAAS 297
G + ++ + +S T R P E V+ V
Sbjct: 234 ---------------------GLLAAAAHAAATNSRFTIFYNPRTSPSEFVIPLV----- 267
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K + VY+ R S GMRF+M FETE+SS + +MGTI+ +
Sbjct: 268 -KYIKAVYHTRVS--------------------VGMRFRMLFETEESS-VRRYMGTITGI 305
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 306 SDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 350
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 163/428 (38%), Positives = 219/428 (51%), Gaps = 75/428 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-SSRIPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V Y PQGH EH +PS + +PP +FCRV +K AD
Sbjct: 55 ELWHACAGPLISLPKKGSAVVYLPQGHLEHL---SEYPSIACNLPPHVFCRVVDVKLQAD 111
Query: 70 SETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDS----ESEKPASFAKTLTQSDANN 124
+ TDEVYA++ LVP E ++D ++ + + +S P F KTLT SD +
Sbjct: 112 AATDEVYAQVSLVPDNQQIEQKWKDGDIDADIEEEEIEGAGKSITPHMFCKTLTASDTST 171
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE F LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGWS
Sbjct: 172 HGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSA 231
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG+L +G+RRA + +C
Sbjct: 232 FVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQA----------------KTC-------- 267
Query: 245 FSCFLREEENKMARNGNMN----LNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
S +L + +G ++ ++S +FN N R S
Sbjct: 268 -SSYLAPCSKPLNVSGIVDAVNVISSRNAFNICYNPRD------------------SSSD 308
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y+ + T A A MR FKM ETED++ F G + V
Sbjct: 309 FIVPYHKFSKT-----LAHPFSAGMR--------FKMRVETEDAAE-QRFTGLVVGVSNV 354
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP-- 418
DP+ WP S WR L V WD+ D+ ++ RVSPW +E + PV S P+ K+ R+
Sbjct: 355 DPVRWPGSKWRCLLVRWDDLDVSRH-NRVSPWEIEPSGSAPVPS-SLVMPSAKRTRVGFP 412
Query: 419 -QQLDFPF 425
+ DFP
Sbjct: 413 ISKADFPI 420
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 212/419 (50%), Gaps = 74/419 (17%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-------VNFPSSSRIPPLIFCRVSSL 64
LWHACAG + +P + V YFPQGH E +L + V PS +PP +FCRV ++
Sbjct: 23 LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSX-HLPPQVFCRVLNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS---ESEKPASFAKTLTQSD 121
A+ ETDEVYA++ LVP P E + E SL P F KTLT SD
Sbjct: 82 NLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTPHMFCKTLTASD 141
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 142 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTG 201
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FVNQ+ LV+GD+++FLR DG+L +GIRRA +P S +++ V
Sbjct: 202 WSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRAS--------HPRSIIPTHS---VLSGQ 250
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+G L N ++ S F+ N R AS F
Sbjct: 251 WGSQLSVLSAAANAIS--------SKSMFHIFYNPR------------------ASPSEF 284
Query: 302 EVVY--YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS--RISWFMGTISSV 357
+ Y Y R CV GMRFKM FE ED++ R S G I+ +
Sbjct: 285 VIPYRKYVRCINRPVCV---------------GMRFKMRFEMEDAAERRCS---GVITGI 326
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
DP+ WP+S WR L V WDE ++ RVSPW +E P +++ P KKLR
Sbjct: 327 GDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPALNV----PRLKKLR 381
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/414 (37%), Positives = 214/414 (51%), Gaps = 65/414 (15%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIFCRV 61
I+ +LWHACAG +V +PP+ S V YFPQGH+E S + + IP P + C +
Sbjct: 1 INSELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTL 60
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD ETDEVYA++ L IP+ + D E L V + +E F KTLT SD
Sbjct: 61 DNITLHADLETDEVYAQMVL--IPSQDPDKETMLLPDAVVQNKQPTEY---FCKTLTASD 115
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR-GTPRRHLLTT 180
+ GGFS+PR AE +FP LDY PP Q +VA+D+H + W FRHIYR G PRRHLLTT
Sbjct: 116 TSTHGGFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHLLTT 175
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+L AGD+++F+R G L +GIRRA + PSS +S++
Sbjct: 176 GWSVFVSAKRLQAGDAVLFIRDDKGQLLLGIRRANR---LQTMMPSSVLSSDSMHI---- 228
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
G + S+ + SS T R P + + LA K
Sbjct: 229 -------------------GILAAASHAAQTSSRFTIFYNPRQSPSEFV--IPLAKYQK- 266
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
V ++ V M RF+M FETE+S+ + +MGT++ +
Sbjct: 267 --------------AVYSTQVTVGM--------RFRMVFETEEST-VRRYMGTVTGIGDL 303
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
DP+ WPNS WR L+V WDE + +RVS W +E ++ P + P +R K
Sbjct: 304 DPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIEPLTT-PFLSCPPPLASRSK 356
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 243 bits (619), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 209/410 (50%), Gaps = 62/410 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL--IFCRVSSLKFLA 68
+LWHACAG + +P V Y PQGH EH LG +++ +FCRV + LA
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEH-LGDAPAAAAAAAAVPPHVFCRVVDVTLLA 96
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE--SEKPASFAKTLTQSDANNGG 126
D+ TDEVYA++ LVP E+ ++ + + P F KTLT SD + G
Sbjct: 97 DAATDEVYAQLSLVP-EKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHG 155
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GFSVPR AE FP LDY+ P Q +VAKD+H W+FRHIYRG PRRHLLTTGWS FV
Sbjct: 156 GFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFV 215
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFS 246
N+KKLV+GD+++FLR DG+L +G+RRA + + G+ +P+
Sbjct: 216 NKKKLVSGDAVLFLRGDDGELRLGVRRAAQ-LKNGSAFPA-------------------- 254
Query: 247 CFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYY 306
+N N G V + E+V F + Y
Sbjct: 255 ----------------------LYNQCSNL-GTLANVAHAVATESV--------FNIYYN 283
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
PR S EF V ++ + G+RFKM +E+ED++ + G I+ DP+ W
Sbjct: 284 PRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATE-RRYTGIITGSGDTDPM-WH 341
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
S W+ L V WD+ + RVSPW +EL S++ HLS +P K+L+
Sbjct: 342 GSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLS--TPHSKRLK 389
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/416 (35%), Positives = 211/416 (50%), Gaps = 65/416 (15%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IF 58
+E ++ +LWHACAG +V +P V+YFPQGH E S N + ++P I
Sbjct: 30 LETALYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKIL 89
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
CRV +++ A +TDEV+A+I L+P P + +N + SF KTLT
Sbjct: 90 CRVINVQLKAKPDTDEVFAQITLLPEPNQD----ENAVEKEPPPPLLPRFHVHSFCKTLT 145
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSV R AE P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL
Sbjct: 146 ASDTSTHGGFSVLRRHAEECLPELDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLL 205
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
+GWS FV+ K+LVAGD+ +FLR + +L VG+RRA + G PSS +S+
Sbjct: 206 QSGWSVFVSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGN---VPSSVISSH------ 255
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+M+L ++ A ++G
Sbjct: 256 ----------------------SMHLG---------------------VLATAWHAVSTG 272
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
F V Y PR S EF V +++ ++ GM F+M FE E++ + GTI ++
Sbjct: 273 TMFTVYYKPRISPAEFIVPFDQYMESVKSNYSIGMGFEMRFEGEEAPE-QRYTGTIVGIE 331
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
ADP WP+S WR L+V WDE + +RVSPW +E + + L+P +R K
Sbjct: 332 DADPQRWPDSKWRCLKVRWDETSTVPRPERVSPWKIEPA--LAPLALNPLPLSRPK 385
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 607 ESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----VLYQD 662
+SG KV + +GR++DLS ++YEEL L +F M ++Y D
Sbjct: 709 QSGSSRSCTKVHKQGIALGRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTD 768
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTI 687
G I GD+P+ +F +++ I
Sbjct: 769 DEGDIMLVGDDPWKEFCGMVRKIFI 793
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 242 bits (618), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 163/434 (37%), Positives = 217/434 (50%), Gaps = 91/434 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHS-----LGSVNFPSSSRIPPLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E + ++ P+ + P IFC+V++++
Sbjct: 44 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFSPLDVPTYD-LHPQIFCKVANVQ 102
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-------SEKPASFAKTLT 118
LA+ E DEVY ++ L+P E + + L VG D E P F KTLT
Sbjct: 103 LLANKENDEVYTQVTLLPQAELEGIYLEGK-ELEGVGEDVEGNGKTPAKSTPHMFCKTLT 161
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP L P Q +VAKD+HG WKFRHIYRG PRRHLL
Sbjct: 162 ASDTSTHGGFSVPRRAAEDCFPPLQR----PSQELVAKDLHGVEWKFRHIYRGQPRRHLL 217
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+QKKLV+GD+++FLR ++G+L +GIRRA + G P S +
Sbjct: 218 TTGWSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNG---LPES---------IV 265
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
GN SC Y +F L +VA A S
Sbjct: 266 GNQ----SC-------------------YPNF------------------LSSVANAISA 284
Query: 299 KP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-----------SR 346
+ F V Y PRAS +F V +++ G RFKM F+ ++S +R
Sbjct: 285 RSMFHVFYSPRASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDESPERRSTTAVTINR 344
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLS 406
S G ++ + DP WP S WR L V WDE + RVSPW V+ P LS
Sbjct: 345 CS--SGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVD-----PSASLS 397
Query: 407 PFS-PARKKLRLPQ 419
P S A ++L+ P+
Sbjct: 398 PLSIQASRRLKKPR 411
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS LSSY +L L +F +E D VLY D I G
Sbjct: 647 KVHKQGSLVGRAIDLSRLSSYNDLLSELERLFSMEGLLREPDKGWRVLYTDRENDIMVVG 706
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F ++ I
Sbjct: 707 DDPWHEFCNVVSKIHI 722
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 151/410 (36%), Positives = 209/410 (50%), Gaps = 62/410 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL--IFCRVSSLKFLA 68
+LWHACAG + +P V Y PQGH EH LG +++ +FCRV + LA
Sbjct: 38 ELWHACAGPVAPLPRKGGVVVYLPQGHLEH-LGDAPAAAAAAAAVPPHVFCRVVDVTLLA 96
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE--SEKPASFAKTLTQSDANNGG 126
D+ TDEVYA++ LVP E+ ++ + + P F KTLT SD + G
Sbjct: 97 DAATDEVYAQLSLVP-EKEEVARRADDGEGEDGDGMKQRFARMPHMFCKTLTASDTSTHG 155
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GFSVPR AE FP LDY+ P Q +VAKD+H W+FRHIYRG PRRHLLTTGWS FV
Sbjct: 156 GFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFV 215
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFS 246
N+KKLV+GD+++FLR DG+L +G+RRA + + G+ +P+
Sbjct: 216 NKKKLVSGDAVLFLRGDDGELRLGVRRAAQ-LKNGSAFPA-------------------- 254
Query: 247 CFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYY 306
+N N G V + E+V F + Y
Sbjct: 255 ----------------------LYNQCSNL-GTLANVAHAVATESV--------FNIYYN 283
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
PR S EF V ++ + G+RFKM +E+ED++ + G I+ DP+ W
Sbjct: 284 PRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMRYESEDATE-RRYTGIITGSGDTDPM-WH 341
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
S W+ L V WD+ + RVSPW +EL S++ HLS +P K+L+
Sbjct: 342 GSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSSVSGSHLS--TPHSKRLK 389
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 220/425 (51%), Gaps = 72/425 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG + +P S V Y PQGH E FP + +PP I CRV ++ A+
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---QEFPPTPYDLPPHILCRVIDVQLHAE 102
Query: 70 SETDEVYAKIKLVPIPANE-----IDFEDNNLSLNSVGSDS-ESEKPASFAKTLTQSDAN 123
+ +DEVYA++ L P NE + E NN S + ++ P F KTLT SD +
Sbjct: 103 AGSDEVYAQVSL--FPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASDTS 160
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSVPR AE FP LDY P Q +VAKD+ G WKFRHIYRG PRRHLLTTGWS
Sbjct: 161 THGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWS 220
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FVN+K+LV+GD+++FLR DG+L +GIRRA + G
Sbjct: 221 AFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSG----------------------S 258
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
FS ++ LNS + V+ AV+ +S F V
Sbjct: 259 AFSNICSQQ-----------LNSSSIMD----------------VVNAVSSKSS---FSV 288
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PRA++ +F + ++ + G+RF+++FET+D + G I+ V DPI
Sbjct: 289 CYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGAD-RRHTGHITGVSDVDPI 347
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV-IHLSPFSPARKKLRL---PQ 419
WP S WR L V WD+ + ++ RVSPW +E ++ + +L P P K+ R+
Sbjct: 348 RWPGSRWRSLMVRWDDGETNRH-GRVSPWEIEPSGSVSLSTNLVP--PGLKRTRIGLSST 404
Query: 420 QLDFP 424
+L+FP
Sbjct: 405 KLEFP 409
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 242 bits (617), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 159/425 (37%), Positives = 220/425 (51%), Gaps = 72/425 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG + +P S V Y PQGH E FP + +PP I CRV ++ A+
Sbjct: 46 ELWHACAGPLTSLPKKGSLVVYLPQGHFEQM---QEFPPTPYDLPPHILCRVIDVQLHAE 102
Query: 70 SETDEVYAKIKLVPIPANE-----IDFEDNNLSLNSVGSDS-ESEKPASFAKTLTQSDAN 123
+ +DEVYA++ L P NE + E NN S + ++ P F KTLT SD +
Sbjct: 103 AGSDEVYAQVSL--FPENEQMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCKTLTASDTS 160
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSVPR AE FP LDY P Q +VAKD+ G WKFRHIYRG PRRHLLTTGWS
Sbjct: 161 THGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWS 220
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FVN+K+LV+GD+++FLR DG+L +GIRRA + G
Sbjct: 221 AFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSG----------------------S 258
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
FS ++ LNS + V+ AV+ +S F V
Sbjct: 259 AFSNICSQQ-----------LNSSSIMD----------------VVNAVSSKSS---FSV 288
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PRA++ +F + ++ + G+RF+++FET+D + G I+ V DPI
Sbjct: 289 CYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGAD-RRHTGHITGVSDVDPI 347
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV-IHLSPFSPARKKLRL---PQ 419
WP S WR L V WD+ + ++ RVSPW +E ++ + +L P P K+ R+
Sbjct: 348 RWPGSRWRSLMVRWDDGETNRH-GRVSPWEIEPSGSVSLSTNLVP--PGLKRTRIGLSST 404
Query: 420 QLDFP 424
+L+FP
Sbjct: 405 KLEFP 409
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 210/422 (49%), Gaps = 62/422 (14%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
++ +LW+ACAG +V +PP S + YFPQGH+E S+ PS +P + C +
Sbjct: 22 VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+ LAD +TDEVYA++ L P+ +N + L + + + F KTLT SD
Sbjct: 82 HSVTMLADPDTDEVYARMTLQPV-SNVTQCDKETLLASELALKQTRPQTEFFCKTLTASD 140
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFPRLD++ PP Q + A+D+H +W FRHIYRG P+RHLLTTG
Sbjct: 141 TSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTG 200
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+L+AG D + IR AK+ +
Sbjct: 201 WSLFVSGKRLLAG-----------DSVLFIRDAKQQL----------------------- 226
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
G R+ N + + + G ++ + N + F
Sbjct: 227 LLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ------------------F 268
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQVA 360
+ Y PRAST EF + + + A+ + L GMRF+M FETE+S +MGTI+ +
Sbjct: 269 TIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESG-TRRYMGTITGISDL 327
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DP+ W S WR +QV WDE + RVS W +E + I+ SP A K+ RLP
Sbjct: 328 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTA-KRPRLPGM 386
Query: 421 LD 422
D
Sbjct: 387 TD 388
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 1009 VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDF 1068
Query: 679 MKSAKRLTIL 688
+K + + IL
Sbjct: 1069 VKCVRCIRIL 1078
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 158/416 (37%), Positives = 208/416 (50%), Gaps = 70/416 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P I C+V +++
Sbjct: 26 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVE 85
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNL-SLNSVGSDSESEKPASFAKTLTQSDANN 124
A++++DEVYA+I L P + + N L S + E SF KTLT SD +
Sbjct: 86 LRAETDSDEVYAQIMLQP------EADQNELTSPKPEPHEPEKCNVHSFCKTLTASDTST 139
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R AE P LD T +PP Q +VA+D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 200 FVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH------------ 244
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+M+L ++ A ++G F V
Sbjct: 245 ----------------SMHLG---------------------VLATASHAISTGTLFSVF 267
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S EF V A+ A GMRFKM FE +++ F GTI V
Sbjct: 268 YKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPERR-FSGTIIGVGSMSTSP 326
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPARKKLRLP 418
W NS WR L+V WDEP ++ RVSPW +E VSN SP PAR K P
Sbjct: 327 WANSDWRSLKVQWDEPSVVPRPDRVSPWELEPLAVSNS---QPSPQPPARNKRARP 379
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 4/122 (3%)
Query: 570 DKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLD 629
D++ AS D Q KS + S T+S KV ++ VGR +D
Sbjct: 506 DQLAASVDAESDQLSQPSHANKSDAPAASSEPSPHETQSRQVRSCTKVIMQGMAVGRAVD 565
Query: 630 LSVLSSYEELYRRLAIMFGI--ERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRL 685
L+ L Y++L +L MF I E S L V+Y D + GD+P+ +F KR+
Sbjct: 566 LTRLHGYDDLRCKLEEMFDIQGELSASLKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRI 625
Query: 686 TI 687
I
Sbjct: 626 YI 627
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 167/470 (35%), Positives = 236/470 (50%), Gaps = 75/470 (15%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP + C
Sbjct: 18 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ +L AD+ETDEVYA++ L P+ A E+ L + S +P + F KTLT
Sbjct: 78 QLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGT-----PSRQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGD+++F+ + L +GIRRA + PSS +S++
Sbjct: 193 TTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASR---PQTVMPSSVLSSDSMHL-- 247
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G ++R F N R + + LA
Sbjct: 248 -----GLLAAAAHAAATISR-----------FTIFFNPRASPSEF-------VIPLA--- 281
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
K + VY+ R V MR L FETE+SS + +MGTI+ +
Sbjct: 282 KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR ++V WDE + RVS W +E ++ P ++ SPF P R L+ P
Sbjct: 321 DLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLR--LKRP 376
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
P G + LG +SP L DN+ GIQ G+S
Sbjct: 377 WPTGLPSFG------IKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVS 420
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 241 bits (616), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 164/474 (34%), Positives = 228/474 (48%), Gaps = 75/474 (15%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+ E K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +P
Sbjct: 20 VAEEHKCLNSELWHACAGPLVSLPAVGSRVLYFPQGHSEQVSASTNKEIESQIPNYPNLP 79
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFA 114
P + C++ ++ AD+ETDEV A++ L P+ E+ + L + + + F
Sbjct: 80 PQLICQLHNVIMHADAETDEVCAQMTLQPLSPQEL----KDPFLPAELGTANKQPTNYFC 135
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+
Sbjct: 136 KTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPK 195
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLLTTGWS F++ K R GD + I WN NN
Sbjct: 196 RHLLTTGWSVFISAK-----------RLVAGDSVLFI-----------------WNDNNQ 227
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
+ R N S S ++ G ++ A
Sbjct: 228 LLLG------------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHA 263
Query: 295 AASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A++ F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGT
Sbjct: 264 ASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGT 322
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I+ + DP WPNS WR ++V WDE + RVS W +E ++ +P ++ SPF P R
Sbjct: 323 ITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTIP-MYSSPF-PMRL 380
Query: 414 KLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
K P L L+ G +S L L D + G Q G++
Sbjct: 381 KRPWPTGLPS---------LYGGKEDDLTSSLMWLRDGANPGFQSFNFGGLGMN 425
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S VGR LD++ SSY EL L +FG+E RS +++ D +
Sbjct: 786 VKVY-KSGAVGRLLDITRFSSYHELRSELGHLFGLEGQLEDPVRSGW--QLVFVDRENDV 842
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWI 701
GD+P+ +F+ S + IL +G+ I
Sbjct: 843 LLVGDDPWQEFVNSVSCIKILSPQEVQQMGKQGI 876
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 168/471 (35%), Positives = 240/471 (50%), Gaps = 76/471 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ ++ +LWHACAG +V +P + S V YFPQGH+E S N PS +PP + C
Sbjct: 20 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLIC 79
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ ++ AD ETDEVYA++ L P+ A E + +G+ S++P + F KTLT
Sbjct: 80 QLHNVTMHADIETDEVYAQMTLQPLTAQE---QKEPYLPAELGA--PSKQPTNYFCKTLT 134
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 195 TTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHL-- 249
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G + ++ + +S T R P + +A
Sbjct: 250 ---------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLA----- 283
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
K + VY+ R V MR F+M FETE+SS + +MGTI+ +
Sbjct: 284 KYVKAVYHTR------------VSVGMR--------FRMLFETEESS-VRRYMGTITGIS 322
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
D WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R L+ P
Sbjct: 323 DLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLR--LKRP 378
Query: 419 QQLDFP-FDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
FP F G + LG +S L L D GIQ G++
Sbjct: 379 WPTGFPSFHG------LKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVA 423
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD+S SSY +L LA MFG+ E D L +++ D +
Sbjct: 771 VKVY-KSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDRENDVLL 829
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 830 LGDDPWPEFVNSVWCIKILSPQEVQDMGK 858
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 199/398 (50%), Gaps = 70/398 (17%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 48 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 107
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD ++DE+YA++ L P+ + F + L GS +E F KTLT SD
Sbjct: 108 HNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGLLR-GSKHPTE---FFCKTLTASD 163
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE +FP LDYTA PP Q +V +D+H W FRHIYRG P+RHLLTTG
Sbjct: 164 TSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTG 223
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV K+L AGDS++
Sbjct: 224 WSLFVGSKRLRAGDSVL------------------------------------------- 240
Query: 242 FGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 241 ------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATANR 288
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSV 357
PF + Y PRA EF + + + A+ L GMRF M FETEDS + +MGTI +
Sbjct: 289 TPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVGI 347
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 348 SDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 385
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S + DV SQ+ S +D + + D SG T SSS+ F + S G
Sbjct: 729 SFAQDVQSQITSASFADSQAFSRQDFPDNSGGTG-------TSSSNVDFDDTSLLQNSKG 781
Query: 610 ----LDTGHCKVFLESED---VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----- 657
L T + + + + VGR++D++ YEEL + MFG+E +L+
Sbjct: 782 SWQKLATPRVRTYTKVQKTGSVGRSIDVTSFRDYEELKSAIECMFGLE--GLLTQPQSSG 839
Query: 658 --VLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
++Y D + GD+P+ +F+ + + IL
Sbjct: 840 WKLVYVDYESDVLLVGDDPWEEFVGCVRCIRIL 872
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/409 (36%), Positives = 218/409 (53%), Gaps = 65/409 (15%)
Query: 2 KEVEKSI-DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+E EK + + +LWHACAG +V +P + S V YF QGH+E S N P+ +P
Sbjct: 13 QEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLP 72
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-F 113
P + C++ ++ AD ETDEVYA++ L P+ E +D L + +G+ S++P + F
Sbjct: 73 PQLICQLHNVTMHADVETDEVYAQLTLQPLSPQEQ--KDAYLPAD-LGT--PSKQPTNYF 127
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P
Sbjct: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQP 187
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
+RHLLTTGWS FV+ K+L+AGDS++F+ + L +GI+RA + PSS +S++
Sbjct: 188 KRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATR---PQTVMPSSVLSSDS 244
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
G + ++ + +S T R P + +A
Sbjct: 245 MHL-----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLA 281
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
K + VYY R S GMRF+M FETE+SS + +MGT
Sbjct: 282 -----KYLKAVYYTRVS--------------------VGMRFRMLFETEESS-VRRYMGT 315
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
I+ + D WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 316 ITGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ S+Y EL LA MFG+E D L +++ D +
Sbjct: 781 VKVY-KSGSFGRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDRENDVLL 839
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD P+ +F+ S + IL +G+
Sbjct: 840 LGDGPWPEFVNSVWCIKILSPQEVQQMGK 868
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 216/412 (52%), Gaps = 67/412 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
++++ +LWHACAG +V +P + S V YFPQGH+E S N P+ + +PP + C
Sbjct: 16 RTLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPPQLIC 75
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
+ ++ AD ETDEVYA++ L P+ E + + + +GS S+ +P++ F TLT
Sbjct: 76 HLHNVTMNADVETDEVYAQMTLQPLSLQE---QKESYFVPDLGSPSK--QPSNYFCXTLT 130
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFS+PR AE +FP LD+T PP Q + A+D+H WKFRHIYRG P+RHLL
Sbjct: 131 ASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLL 190
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVA GD + IR +++G +
Sbjct: 191 TTGWSVFVSAKRLVA-----------GDSVLFIR------------------NDSGQLLL 221
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G R N + S S ++ G ++ A AA+
Sbjct: 222 G-----------------IRRANKSPTVMPSSVLSSDSMHIG------VLAAAAHAAATN 258
Query: 299 KPFEVVYYPRASTPEFCVKASAV-KAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
PF + Y PRAS EF + S KA G+RF+M FETE+S + +MGTI+ +
Sbjct: 259 SPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESG-VRRYMGTITGI 317
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS 409
DP+ WPNS WR L+V WDE + RVS W +E ++ +++ P+S
Sbjct: 318 GDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIEPLTTF-LMYPPPYS 368
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 14/188 (7%)
Query: 506 SSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSS 565
S EN C L ++ ++ +N+ GQ +S S++ + SS
Sbjct: 639 SDENSPCPLLPKSTQPPTQQPKNLLSPALFQEGQIPSASYHVSKEISNNQI-----MSSP 693
Query: 566 DGHSDKVKASSDGSGSTHEQRIS-IEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDV 624
GH++ S++ + Q I I++S S ++ +++ L T + +
Sbjct: 694 SGHTEVHLTSANPCIVSQSQSIGGIDESGISP----QAANLSQIHLPTRTFTKVYKLGSI 749
Query: 625 GRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS--HVLYQDASGAIKRTGDEPFSDFMK 680
GR++D++ S Y EL LA MF +E D S +++ D + GD+P+ +F+
Sbjct: 750 GRSIDVTRFSGYPELRCELARMFNLEGQLEDCRSGWQLVFVDKENDVLLLGDDPWEEFVI 809
Query: 681 SAKRLTIL 688
+ + + IL
Sbjct: 810 NVRYIKIL 817
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/406 (36%), Positives = 209/406 (51%), Gaps = 66/406 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 21 QRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 80
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ E+ + + S++P + F KTL
Sbjct: 81 CQLHNVTMHADAETDEVYAQMTLQPLSP-----EEQKEPFLPIELGAASKQPTNYFCKTL 135
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++AKD+H WKFRHI+RG P+RHL
Sbjct: 136 TASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHL 195
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVA GD + I WN NN +
Sbjct: 196 LTTGWSVFVSAKRLVA-----------GDSVIFI-----------------WNDNNQLLL 227
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R+ N S S ++ G ++ A AA+
Sbjct: 228 G------------------IRHANRPQTVMPSSVLSSDSMHIG------LLAAAAHAAAT 263
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PRAS EF + A VK+ GMRF+M FETE+SS + +MGTI++
Sbjct: 264 NSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESS-VRRYMGTITT 322
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ D WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 323 ISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPM 368
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 216/708 (30%), Positives = 311/708 (43%), Gaps = 131/708 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS------SSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S S +P I C+V +
Sbjct: 25 ELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLDQQMPSFNLPSKILCKVVHV 84
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A+ ETDEVYA++ L+P P +EI D L + + SF KTLT SD +
Sbjct: 85 QLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLP------EPQRCTVHSFCKTLTASDTS 138
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 139 THGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQPRRHLLTTGWS 198
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVAGD+ +FLR ++G+L VG+RR + + + PSS +S+
Sbjct: 199 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQL---SNMPSSVISSH----------- 244
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L + + + +T G F V
Sbjct: 245 -----------------SMHLGVLATASHAIST---------------------GTLFSV 266
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S EF V + A GMRFKM FE E+ F GTI V +
Sbjct: 267 FYKPRTSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGEEVPERR-FSGTIVGVGDKNTS 325
Query: 364 S-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQL 421
S W +S WR L+V WDEP + +RVS W +E LV+ +L P R K P L
Sbjct: 326 SGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAAPTNLQPAQ--RNKRARPPVL 383
Query: 422 -----DFPFDGQFTMPLFS-----------GNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
D G + + S G L PS ++ T++ +
Sbjct: 384 PSATPDLSVLGMWKSSVESPSGFPYCDPHRGRDLYPSPKFSSIT-KTNSFSFSGNSSPAA 442
Query: 466 ISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEK 525
+SS+ + +N+++ ++ + F P G T S L + NS LE+
Sbjct: 443 VSSNSMYWSNRME-----TATESFAPAVNKESGEKRRDTGSGCRLFGFQLLDNS--TLEE 495
Query: 526 SENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSD--KVKASSDGSGSTH 583
+ P+ T + S DV SD HS+ + S S S
Sbjct: 496 T------------LPVLTVGEDQPVPSLDV--------ESDQHSEPSNINRSDIPSVSCE 535
Query: 584 EQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRL 643
++S+ RS Q ++S KV ++ VGR +DL+ YE+L ++L
Sbjct: 536 PDKLSL-----------RSPQESQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYEDLLKKL 584
Query: 644 AIMFGIERS----DMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
MF I+ + V+Y D + GD+P+ +F +++ I
Sbjct: 585 EEMFDIQGELCGLTSIWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFI 632
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 149/392 (38%), Positives = 201/392 (51%), Gaps = 64/392 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P P I C+V +++
Sbjct: 20 ELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPPKILCKVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P E D + S +S + E SF KTLT SD +
Sbjct: 80 LRAETDSDEVYAQIMLQP----EAD-QSEPTSPDSEPPEPERCNVYSFCKTLTASDTSTH 134
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R AE P+LD T +PP Q ++AKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 135 GGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 194
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 195 VSSKRLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH------------- 238
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
NM+L ++ A ++G F V Y
Sbjct: 239 ---------------NMHLG---------------------VLATASHAISTGTLFSVFY 262
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVADPI 363
PR S EF V + A GMRFKM FE ++S R+S + + S+
Sbjct: 263 KPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEGDESPERRLSGTIIGLGSMPANSTS 322
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W NS WR L+V WDEP + RVSPW +E
Sbjct: 323 PWANSDWRSLRVQWDEPSAILRPDRVSPWELE 354
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 240 bits (612), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 200/392 (51%), Gaps = 64/392 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S N + +P I C V +++
Sbjct: 20 ELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P E D + SL+ D E SF KTLT SD +
Sbjct: 80 LRAEADSDEVYAQIMLQP----EAD-QSELTSLDPELQDLEKCTAHSFCKTLTASDTSTH 134
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 194
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR + G+L VG+RR + + N PSS +S+
Sbjct: 195 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQV---NNMPSSVISSH------------- 238
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+M+L ++ A ++G F V Y
Sbjct: 239 ---------------SMHLG---------------------VLATASHAISTGTLFSVFY 262
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVADPI 363
PR S EF V + A + + GMRFKM FE +++ R S + I SV
Sbjct: 263 KPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKS 322
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S W+ L+V WDEP + RVSPW +E
Sbjct: 323 PWADSDWKSLKVQWDEPSAIVRPDRVSPWELE 354
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 199/399 (49%), Gaps = 72/399 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQS 120
++ AD ++DE+YA++ L P+ + E + + G S+ P F KTLT S
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHS-----ERDVFPVPDFGMLRGSKHPTEFFCKTLTAS 165
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE +FP LDY+A PP Q +V +D+H W FRHIYRG P+RHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 225
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV K+L AGDS++
Sbjct: 226 GWSLFVGSKRLRAGDSVL------------------------------------------ 243
Query: 241 PFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 244 -------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATAN 290
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + + + A+ L GMRF M FETEDS + +MGTI
Sbjct: 291 RTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVG 349
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 350 ISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S + DV SQ+ S +D + + D SG T SSS+ F + S + G
Sbjct: 729 SFAQDVQSQITSASFADSQAFSRQDFPDNSGGTG-------TSSSNVDFDDCSLRQNSKG 781
Query: 610 -----LDTGHCKVFLESED---VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH---- 657
+ T + +++ + VGR++D++ YEEL + MFG+E +L+H
Sbjct: 782 SSWQKIATPRVRTYIKVQKTGSVGRSIDVTSFKDYEELKSAIECMFGLE--GLLTHPQSS 839
Query: 658 ---VLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
++Y D + GD+P+ +F+ + + IL
Sbjct: 840 GWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRIL 873
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/425 (35%), Positives = 212/425 (49%), Gaps = 71/425 (16%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
++ +LW+ACAG +V +PP S + YFPQGH+E S+ PS +P + C +
Sbjct: 22 VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 81
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFED---NNLSLNSVGSDSESEKPASFAKTLT 118
S+ LAD +TDEVYA++ L P+ + D E + L+L +E F KTLT
Sbjct: 82 HSVTMLADPDTDEVYARMTLQPV--TQCDKETLLASELALKQTRPQTEF-----FCKTLT 134
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFPRLD++ PP Q + A+D+H +W FRHIYRG P+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLL 194
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+L+AG D + IR AK+ +
Sbjct: 195 TTGWSLFVSGKRLLAG-----------DSVLFIRDAKQQL-------------------- 223
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G R+ N + + + G ++ + N +
Sbjct: 224 ---LLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ---------------- 264
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSV 357
F + Y PRAST EF + + + A+ + L GMRF+M FETE+S +MGTI+ +
Sbjct: 265 --FTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESG-TRRYMGTITGI 321
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ W S WR +QV WDE + RVS W +E + I+ SP A K+ RL
Sbjct: 322 SDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTA-KRPRL 380
Query: 418 PQQLD 422
P D
Sbjct: 381 PGMTD 385
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 1006 VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDF 1065
Query: 679 MKSAKRLTIL 688
+K + + IL
Sbjct: 1066 VKCVRCIRIL 1075
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 159/420 (37%), Positives = 212/420 (50%), Gaps = 72/420 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLI 57
V+ + +LW ACAG +V++P + VFYFPQGH E + S N + +PP I
Sbjct: 5 VDDQLYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVFNLPPKI 64
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
CRV ++ A+ ETDEVYA+I L P E D + SL+ ++ + SF K L
Sbjct: 65 LCRVLNVMLKAEHETDEVYAQITLQP----EED-QSEPTSLDPPLTEPAKQTVDSFVKIL 119
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSV R A P LD T P Q +VA+D+HG W+F+HI+RG PRRHL
Sbjct: 120 TASDTSTHGGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRRHL 179
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRA-QDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LTTGWSTFV K+LVAGD+ VFLR Q GDL VG+RR K + P+S +S
Sbjct: 180 LTTGWSTFVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAK---QQSTMPASVISSQ---- 232
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L + + + NT
Sbjct: 233 ------------------------SMHLGVLATASHAFNTTTM----------------- 251
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTIS 355
F V+Y PR S +F + + AAM+ + GMRF+M FE E+S RI F GTI
Sbjct: 252 ----FVVLYKPRIS--QFIISVNKYMAAMKKGFGIGMRFRMRFEGEESPERI--FTGTIV 303
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPARK 413
P WP S WR LQV WDE +Q +VSPW +E L S + P+S +++
Sbjct: 304 GTGDLSP-QWPASKWRSLQVQWDESSTVQRPNKVSPWEIEPFLPSTLTTSPTQPYSKSKR 362
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR +DL++L SY+EL R L MF IE R+ +++ D G + GD
Sbjct: 477 KVQMQGTAVGRAVDLTLLRSYDELIRELEKMFEIEGELRTKDKWAIVFTDDEGDMMLVGD 536
Query: 673 EPFSDFMKSAKRLTILMGSGSDSVGR 698
+P+ +F K AK+L I SD V +
Sbjct: 537 DPWDEFCKMAKKLFIY---SSDEVKK 559
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 202/391 (51%), Gaps = 79/391 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P S V YFPQGH E + +F ++ +PP +FCR+ +K A+
Sbjct: 52 ELWHACAGPLISLPKRGSLVLYFPQGHLEQA---PDFSAAIYGLPPHVFCRILDVKLHAE 108
Query: 70 SETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSE----SEKPASFAKTLTQSDANN 124
+ TDEVYA++ L+P + E + + ++ D E S P F KTLT SD +
Sbjct: 109 TTTDEVYAQVSLLPESEDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTASDTST 168
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR AE FP LDY+ P Q ++A+D+HG W+FRHIYRG PRRHLLTTGWS
Sbjct: 169 HGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSA 228
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FVN+KKLV+GD+++FLR DG L +G+RRA + G+ + P
Sbjct: 229 FVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQ---------------IEGTLMPYRPI-V 272
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
FS F N N S+ +F + + K ++V
Sbjct: 273 FSAFT---------TTNHNWASWSNF-----------------------IIPAPKFLKIV 300
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
YP FC+ GMRFK E+ED+S G I+ + DPI
Sbjct: 301 DYP------FCI---------------GMRFKARVESEDASERR-SPGIITGISDLDPIR 338
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
WP S WR L V WD+ + + +RVSPW +E
Sbjct: 339 WPGSKWRCLLVRWDDIEANGHQQRVSPWEIE 369
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 199/399 (49%), Gaps = 72/399 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQS 120
++ AD ++DE+YA++ L P+ + E + + G S+ P F KTLT S
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHS-----ERDVFPVPDFGMLRGSKHPTEFFCKTLTAS 165
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE +FP LDY+A PP Q +V +D+H W FRHIYRG P+RHLLTT
Sbjct: 166 DTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 225
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV K+L AGDS++
Sbjct: 226 GWSLFVGSKRLRAGDSVL------------------------------------------ 243
Query: 241 PFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 244 -------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATAN 290
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + + + A+ L GMRF M FETEDS + +MGTI
Sbjct: 291 RTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVG 349
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 350 ISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGST--HEQRISIEKSSSSEFFWNRSFQVTE 607
S + DV SQ+ S +D + + D SG T + + S + S+Q
Sbjct: 729 SFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIA 788
Query: 608 SGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-------VLY 660
+ + KV ++ VGR++D++ YEEL + MFG+E +L+H ++Y
Sbjct: 789 TPRVRTYTKV-QKTGSVGRSIDVTSFKDYEELKSAIECMFGLE--GLLTHPQSSGWKLVY 845
Query: 661 QDASGAIKRTGDEPFSDFMKSAKRLTIL 688
D + GD+P+ +F+ + + IL
Sbjct: 846 VDYESDVLLVGDDPWEEFVGCVRCIRIL 873
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/400 (36%), Positives = 203/400 (50%), Gaps = 65/400 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFC 59
E ++ +LW ACAG +V +P + VFYFPQGH E S N R +P I C
Sbjct: 18 EDALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES----EKPASFAK 115
V +++ A+ +TDEVYA++ L+P + EDN + V S + + SF K
Sbjct: 78 EVMNVELKAEPDTDEVYAQLTLLPESKQQ---EDNGSTEEEVPSAPAAGHVRPRVHSFCK 134
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRR
Sbjct: 135 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRR 194
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 195 HLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSVISSHS-- 249
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
M+L + + NT
Sbjct: 250 --------------------------MHLGVLATAWHAVNT------------------- 264
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 265 --GTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQR-FTGTIV 321
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ +DP WP S WR L+V WDE + +RVSPW +E
Sbjct: 322 GMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIE 361
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCK-VFLESEDVGRTLDLSVLSSYEELYRRLAIMF- 647
EK SS + +R+ G+ T CK V + +GR++DL+ + YEEL L MF
Sbjct: 687 EKPSSQQA--SRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFD 744
Query: 648 ------GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
G ++ M V+Y D G + GD+P+ +F ++ I
Sbjct: 745 FNGELKGPKKEWM---VVYTDNEGDMMLVGDDPWIEFCDMVHKIFI 787
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/403 (36%), Positives = 198/403 (49%), Gaps = 80/403 (19%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YFPQGH+E + P+ +P + C+V
Sbjct: 49 INSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 108
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD ++DE+YA++ L P+ + F L GS SE F KTLT SD
Sbjct: 109 HNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPEFGLLR-GSKHPSE---FFCKTLTASD 164
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE +FP LDYTA PP Q +V +D+H W FRHIYRG P+RHLLTTG
Sbjct: 165 TSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTG 224
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV K+L AGDS++
Sbjct: 225 WSLFVGSKRLRAGDSVL------------------------------------------- 241
Query: 242 FGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 242 ------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATANR 289
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCG------MRFKMAFETEDSSRISWFMG 352
PF + Y PRA EF + + + A +CG MRF M FETEDS + +MG
Sbjct: 290 TPFLIFYNPRACPAEFVIPIAKYRKA-----ICGSQLSVSMRFGMMFETEDSGK-RRYMG 343
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
TI + DP+ W S WR LQV WDEP RVSPW +E
Sbjct: 344 TIVGISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 386
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 199/399 (49%), Gaps = 72/399 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 39 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQS 120
++ AD ++DE+YA++ L P+ + E + + G S+ P F KTLT S
Sbjct: 99 HNVTLHADKDSDEIYAQMSLQPVHS-----ERDVFPVPDFGMLRGSKHPTEFFCKTLTAS 153
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE +FP LDY+A PP Q +V +D+H W FRHIYRG P+RHLLTT
Sbjct: 154 DTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 213
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV K+L AGDS++
Sbjct: 214 GWSLFVGSKRLRAGDSVL------------------------------------------ 231
Query: 241 PFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 232 -------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATAN 278
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + + + A+ L GMRF M FETEDS + +MGTI
Sbjct: 279 RTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 338 ISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 12/148 (8%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGST--HEQRISIEKSSSSEFFWNRSFQVTE 607
S + DV SQ+ S +D + + D SG T + + S + S+Q
Sbjct: 717 SFAQDVQSQITSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKIA 776
Query: 608 SGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-------VLY 660
+ + KV ++ VGR++D++ YEEL + MFG+E +L+H ++Y
Sbjct: 777 TPRVRTYTKV-QKTGSVGRSIDVTSFKDYEELKSAIECMFGLE--GLLTHPQSSGWKLVY 833
Query: 661 QDASGAIKRTGDEPFSDFMKSAKRLTIL 688
D + GD+P+ +F+ + + IL
Sbjct: 834 VDYESDVLLVGDDPWEEFVGCVRCIRIL 861
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 146/395 (36%), Positives = 201/395 (50%), Gaps = 68/395 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW ACAG +V +P + VFYFPQGH E S N + R +P I C V +++
Sbjct: 70 ELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLYNLPWKILCEVMNVE 129
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SFAKTLTQS 120
A+S+TDEVYA++ L+P E ++ N S V S + S P SF KTLT S
Sbjct: 130 LKAESDTDEVYAQLTLLP----ESKQQEENASTEEV-SAAPSAAPVRPRVHSFCKTLTAS 184
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R A+ P LD + PP Q + AKD+HG W+FRHI+RG PRRHLL +
Sbjct: 185 DTSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQPRRHLLQS 244
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 245 GWSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSVISSHS------- 294
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
M+L + + NT G
Sbjct: 295 ---------------------MHLGVLATAWHAVNT---------------------GTM 312
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI + +
Sbjct: 313 FTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQR-FTGTIVGMGDS 371
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP W S WR L+V WDE + +RVSPW +E
Sbjct: 372 DPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIE 406
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 166/470 (35%), Positives = 235/470 (50%), Gaps = 75/470 (15%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP + C
Sbjct: 3 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLIC 62
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ +L AD+ETDEVYA++ L P+ A E+ L + S +P + F KTLT
Sbjct: 63 QLHNLTMHADAETDEVYAQMTLQPLSAQELKEAYLPAELGT-----PSRQPTNYFCKTLT 117
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 118 ASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 177
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGD+++F+ + L +GIRRA + PSS +S++
Sbjct: 178 TTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASR---PQTVMPSSVLSSDSMHL-- 232
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G ++R F N R + + LA
Sbjct: 233 -----GLLAAAAHAAATISR-----------FTIFFNPRASPSEF-------VIPLA--- 266
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
K + VY+ R V MR L FET +SS + +MGTI+ +
Sbjct: 267 KYVKAVYHTR------------VSVGMRFRML--------FETXESS-VRRYMGTITGIS 305
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR ++V WDE + RVS W +E ++ P ++ SPF P R L+ P
Sbjct: 306 DLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLR--LKRP 361
Query: 419 QQLDFPFDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
P G + LG +SP L DN+ GIQ G+S
Sbjct: 362 WPTGLPSFG------IKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVS 405
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 199/399 (49%), Gaps = 72/399 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 40 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 99
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQS 120
++ AD ++DE+YA++ L P+ + E + + G S+ P F KTLT S
Sbjct: 100 HNVTLHADKDSDEIYAQMSLQPVHS-----ERDVFPVPDFGMLRGSKHPTEFFCKTLTAS 154
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE +FP LDY+A PP Q +V +D+H W FRHIYRG P+RHLLTT
Sbjct: 155 DTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 214
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV K+L AGDS++
Sbjct: 215 GWSLFVGSKRLRAGDSVL------------------------------------------ 232
Query: 241 PFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 233 -------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATAN 279
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + + + A+ L GMRF M FETEDS + +MGTI
Sbjct: 280 RTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVG 338
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 339 ISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 377
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 200/394 (50%), Gaps = 65/394 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW ACAG +V +P + VFYFPQGH E S N R +P I C V +++
Sbjct: 41 ELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVE 100
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES----EKPASFAKTLTQSD 121
A+ +TDEVYA++ L+P + EDN + V S + + SF KTLT SD
Sbjct: 101 LKAEPDTDEVYAQLTLLPESKQQ---EDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSVISSHS-------- 266
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
M+L + + NT G F
Sbjct: 267 --------------------MHLGVLATAWHAVNT---------------------GTMF 285
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI + +D
Sbjct: 286 TVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQR-FTGTIVGMGDSD 344
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P WP S WR L+V WDE + +RVSPW +E
Sbjct: 345 PAGWPESKWRSLKVRWDEASSIPRPERVSPWQIE 378
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCK-VFLESEDVGRTLDLSVLSSYEELYRRLAIMF- 647
EK SS + +R+ G+ T CK V + +GR++DL+ + YEEL L MF
Sbjct: 704 EKPSSQQA--SRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFD 761
Query: 648 ------GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
G ++ M V+Y D G + GD+P+ +F ++ I
Sbjct: 762 FNGELKGPKKEWM---VVYTDNEGDMMLVGDDPWIEFCDMVHKIFI 804
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 200/394 (50%), Gaps = 65/394 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW ACAG +V +P + VFYFPQGH E S N R +P I C V +++
Sbjct: 40 ELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVE 99
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES----EKPASFAKTLTQSD 121
A+ +TDEVYA++ L+P + EDN + V S + + SF KTLT SD
Sbjct: 100 LKAEPDTDEVYAQLTLLPESKQQ---EDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSVISSHS-------- 265
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
M+L + + NT G F
Sbjct: 266 --------------------MHLGVLATAWHAVNT---------------------GTMF 284
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI + +D
Sbjct: 285 TVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQR-FTGTIVGMGDSD 343
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P WP S WR L+V WDE + +RVSPW +E
Sbjct: 344 PAGWPESKWRSLKVRWDEASSIPRPERVSPWQIE 377
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCK-VFLESEDVGRTLDLSVLSSYEELYRRLAIMF- 647
EK SS + +R+ G+ T CK V + +GR++DL+ + YEEL L MF
Sbjct: 703 EKPSSQQA--SRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFD 760
Query: 648 ------GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
G ++ M V+Y D G + GD+P+ +F ++ I
Sbjct: 761 FNGELKGPKKEWM---VVYTDNEGDMMLVGDDPWIEFCDMVHKIFI 803
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 200/392 (51%), Gaps = 64/392 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S N + +P I C V +++
Sbjct: 20 ELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMFNLPSKILCSVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A++++DEVYA+I L P E D + SL+ D E SF KTLT SD +
Sbjct: 80 LRAEADSDEVYAQIMLQP----EAD-QSELTSLDPELQDLEKCTAHSFCKTLTASDTSTH 134
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 135 GGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPRRHLLTTGWSVF 194
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR + G+L VG+RR + + N PSS +S+
Sbjct: 195 VSSKRLVAGDAFIFLRGESGELRVGVRRLMRQV---NNMPSSVISSH------------- 238
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+M+L + + + +T G F V Y
Sbjct: 239 ---------------SMHLGVLATASHAIST---------------------GTLFSVFY 262
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS--SRISWFMGTISSVQVADPI 363
PR S EF V + A + + GMRFKM FE +++ R S + I SV
Sbjct: 263 KPRTSRSEFVVSVNKYLEAKKQNLSVGMRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKS 322
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S W+ L+V WDEP + RVSPW +E
Sbjct: 323 PWADSDWKSLKVQWDEPSAIVCPDRVSPWELE 354
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRT 670
KV ++ VGR +DL+ L+ Y +L +L MF I+ D+ V+Y D +
Sbjct: 538 KVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQ-GDLCPTLKRWQVVYTDDEDDMMLV 596
Query: 671 GDEPFSDFMKSAKRLTI 687
GD+P+ +F KR+ I
Sbjct: 597 GDDPWDEFCSMVKRIYI 613
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 208/407 (51%), Gaps = 68/407 (16%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLI 57
V ++ +LWHACAG +V +P V+YFPQGH E S++ PS + +P I
Sbjct: 18 VNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFN-LPSKI 76
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
C+V ++ A+ ETDEVYA++ L+P P +EI D L + +S SF KT
Sbjct: 77 LCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLP------EPQSCTVHSFCKT 130
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + +PP Q +VAKD+HG W FRHI+RG PRRH
Sbjct: 131 LTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRH 190
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L AGD+ +FLR ++G+L VG+RR + + N P S +S+
Sbjct: 191 LLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQL---NNVPPSVISSH---- 243
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A
Sbjct: 244 ------------------------SMHLG---------------------VLATASHAIT 258
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PRAS EF V + A GMRFKM FE +++ F GTI
Sbjct: 259 TGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERR-FSGTIVG 317
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPV 402
V W +S WR L+V WDEP + +RVSPW +E LV+ P+
Sbjct: 318 VGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPL 364
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRT 670
KV ++ VGR +DL+ SSY+EL +L MF I + ++ V+Y D +
Sbjct: 525 KVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDI-KGELCGPTKKWQVVYTDDEDDMMMV 583
Query: 671 GDEPFSDFMKSAKRLTI 687
GD+P+ +F +++ I
Sbjct: 584 GDDPWHEFCSMVRKIFI 600
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 208/407 (51%), Gaps = 68/407 (16%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLI 57
V ++ +LWHACAG +V +P V+YFPQGH E S++ PS + +P I
Sbjct: 16 VNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFN-LPSKI 74
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
C+V ++ A+ ETDEVYA++ L+P P +EI D L + +S SF KT
Sbjct: 75 LCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLP------EPQSCTVHSFCKT 128
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + +PP Q +VAKD+HG W FRHI+RG PRRH
Sbjct: 129 LTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRH 188
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L AGD+ +FLR ++G+L VG+RR + + N P S +S+
Sbjct: 189 LLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQL---NNVPPSVISSH---- 241
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A
Sbjct: 242 ------------------------SMHLG---------------------VLATASHAIT 256
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PRAS EF V + A GMRFKM FE +++ F GTI
Sbjct: 257 TGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERR-FSGTIVG 315
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPV 402
V W +S WR L+V WDEP + +RVSPW +E LV+ P+
Sbjct: 316 VGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPL 362
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRT 670
KV ++ VGR +DL+ SSY+EL +L MF I + ++ V+Y D +
Sbjct: 523 KVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDI-KGELCGPTKKWQVVYTDDEDDMMMV 581
Query: 671 GDEPFSDFMKSAKRLTI 687
GD+P+ +F +++ I
Sbjct: 582 GDDPWHEFCSMVRKIFI 598
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 144/399 (36%), Positives = 200/399 (50%), Gaps = 72/399 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 39 INSMLWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLTQS 120
++ AD ++DE+YA++ L P+ + E + L + +G S+ P+ F KTLT S
Sbjct: 99 HNVTLHADKDSDEIYAQMSLQPVHS-----ERDVLPVPDLGLLRGSKHPSEYFCKTLTAS 153
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE +FP LDYTA PP Q +V +D+H W FRHIYRG P+RHLLTT
Sbjct: 154 DTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 213
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV K+L AGDS++
Sbjct: 214 GWSLFVGSKRLRAGDSVL------------------------------------------ 231
Query: 241 PFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 232 -------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATAN 278
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISS 356
PF + + PRA EF + + A+ L GMRF M FETEDS + +MGTI
Sbjct: 279 RTPFLIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGK-RRYMGTIVG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVSPW +E
Sbjct: 338 ISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 376
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-------VLYQDASGAIKRTGDEPFS 676
VGR++D++ YEEL + MFG+E +L+ ++Y D + GD+P+
Sbjct: 741 VGRSIDVTSFRDYEELKTAIECMFGLE--GLLTRPKTSGWKLVYVDYESDVLLVGDDPWE 798
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 799 EFVGCVRCIRIL 810
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 239 bits (609), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 147/422 (34%), Positives = 209/422 (49%), Gaps = 65/422 (15%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
++ +LW+ACAG +V +PP S + YFPQGH+E S+ PS +P + C +
Sbjct: 5 VNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 64
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+ LAD +TDEVYA++ L P+ + + L + + + F KTLT SD
Sbjct: 65 HSVTMLADPDTDEVYARMTLQPVS----NCDKETLLASELALKQTRPQTEFFCKTLTASD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFPRLD++ PP Q + A+D+H +W FRHIYRG P+RHLLTTG
Sbjct: 121 TSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+L+AG D + IR AK+ +
Sbjct: 181 WSLFVSGKRLLAG-----------DSVLFIRDAKQQL----------------------- 206
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
G R+ N + + + G ++ + N + F
Sbjct: 207 LLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ------------------F 248
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQVA 360
+ Y PRAST EF + + + A+ + L GMRF+M FETE+S +MGTI+ +
Sbjct: 249 TIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESG-TRRYMGTITGISDL 307
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DP+ W S WR +QV WDE + RVS W +E + I+ SP A K+ RLP
Sbjct: 308 DPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTA-KRPRLPGM 366
Query: 421 LD 422
D
Sbjct: 367 TD 368
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 989 VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDF 1048
Query: 679 MKSAKRLTIL 688
+K + + IL
Sbjct: 1049 VKCVRCIRIL 1058
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 157/418 (37%), Positives = 205/418 (49%), Gaps = 64/418 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG + +P S V Y PQGH EH +G + + +PP + CRV + AD
Sbjct: 36 ELWHACAGPVAPLPRKGSAVVYLPQGHLEH-IGGDADAAGAAVPPHVLCRVVDVTLHADG 94
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSL----NSVGSDSESEKPAS-----FAKTLTQSD 121
TDEVYA++ L+P + + G D + KP + F KTLT SD
Sbjct: 95 ATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLARTPHMFCKTLTASD 154
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 155 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTG 214
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FVN+KKLV+GD+++FLR +DG L +G+RRA + VT P
Sbjct: 215 WSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQ-----------------LKIVTPIP 257
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
C SS T GN V +AVA F
Sbjct: 258 ALHNQC------------------------SSQTTLGN--------VAQAVATRTV---F 282
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+ Y PR S EF V ++ GMR +M +E++D+S G I + A+
Sbjct: 283 HIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRCRMRYESDDASERR-CTGIIIGSREAE 341
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
PI W S W+ L V WD+ RVSPW +E+ ++ H+ + R K LPQ
Sbjct: 342 PI-WYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVTGSVSGSHMCAPNSKRLKPCLPQ 398
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 238 bits (608), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 223/432 (51%), Gaps = 68/432 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 22 QRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 81
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ E + L + S++P + F KTL
Sbjct: 82 CQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAA-----SKQPTNYFCKTL 136
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 137 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 196
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 197 LTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANR---QQTVMPSSVLSSDSMHI- 252
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + +A
Sbjct: 253 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA---- 286
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K + VY+ R V MR L FETE+SS + +MGTI+S+
Sbjct: 287 -KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITSI 324
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
D + WPNS WR ++V WDE RVS W +E ++ P ++ S F P R L+
Sbjct: 325 SDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFP-MYPSAF-PLR--LKR 380
Query: 418 PQQLDFPFDGQF 429
P P G F
Sbjct: 381 PWASGLPMHGMF 392
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 213/709 (30%), Positives = 310/709 (43%), Gaps = 133/709 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S+N PS + +P I C+V ++
Sbjct: 18 ELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN-LPSKILCKVVNI 76
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA----SFAKTLTQS 120
A+ ETDEVYA+I L+P + + S + D E P SF KTLT S
Sbjct: 77 HLRAEPETDEVYAQITLLP---------ETDQSEVTSPDDPLPEPPRCTVHSFCKTLTAS 127
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R A+ P LD T PP Q +VA D+HG W FRHI+RG PRRHLLTT
Sbjct: 128 DTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 187
Query: 181 GWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
GWS FV+ KKLVAGD+ +FLR ++G+L VG ++ + + PSS +S++
Sbjct: 188 GWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVG---VRRLMRQQSNMPSSVISSHS--- 241
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
M+L ++ A +
Sbjct: 242 -------------------------MHLG---------------------VLATASHAIS 255
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V + A GMRFKM FE ++ F GTI
Sbjct: 256 TGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERR-FSGTIVG 314
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
V+ W +S WR L+V WDEP + RVSPW +E + + P + P R K
Sbjct: 315 VEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTQ--RNKRS 372
Query: 417 LPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNK 476
P P+ PS+ ++D++ GI + S F +
Sbjct: 373 RP-------------------PILPST----MTDSSLQGIWKS-----PADSPPFPYRDP 404
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ-----NLEKSENIKK 531
Q G L RF+ + F G + S++++ + NS + LE+S ++
Sbjct: 405 -QHGRDLYPSPRFSSTATSFLGFGGNSPASNKSMYWSSRLENSTEPFSPVALEESGEKRQ 463
Query: 532 ---HQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRIS 588
+ LFG + S +S +G D+ S D H + +
Sbjct: 464 GTGNGCRLFGIQLLENSNAEESLQTAPLSGRVG-------DDRSVPSLDVESDQHSEPSN 516
Query: 589 IEKSSSSEFFWN------RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRR 642
+ +S + RS Q ++S KV ++ VGR +DL+ YE+L R+
Sbjct: 517 VNRSDIPSVSCDADKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRK 576
Query: 643 LAIMFGIERSDMLSH----VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L MF IE + V+Y D + GD+P+ +F +++ I
Sbjct: 577 LEEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFI 625
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 223/432 (51%), Gaps = 68/432 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 3 QRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 62
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ E + L + S++P + F KTL
Sbjct: 63 CQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAA-----SKQPTNYFCKTL 117
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 118 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 177
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 178 LTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANR---QQTVMPSSVLSSDSMHI- 233
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + +A
Sbjct: 234 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA---- 267
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K + VY+ R V MR L FETE+SS + +MGTI+S+
Sbjct: 268 -KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITSI 305
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
D + WPNS WR ++V WDE RVS W +E ++ P ++ S F P R L+
Sbjct: 306 SDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFP-MYPSAF-PLR--LKR 361
Query: 418 PQQLDFPFDGQF 429
P P G F
Sbjct: 362 PWASGLPMHGMF 373
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 154/432 (35%), Positives = 223/432 (51%), Gaps = 68/432 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 22 QRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 81
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ E + L + S++P + F KTL
Sbjct: 82 CQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAA-----SKQPTNYFCKTL 136
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 137 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 196
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 197 LTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANR---QQTVMPSSVLSSDSMHI- 252
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
G + ++ + +S T R P + +A
Sbjct: 253 ----------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLA---- 286
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K + VY+ R V MR L FETE+SS + +MGTI+S+
Sbjct: 287 -KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITSI 324
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
D + WPNS WR ++V WDE RVS W +E ++ P ++ S F P R L+
Sbjct: 325 SDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFP-MYPSAF-PLR--LKR 380
Query: 418 PQQLDFPFDGQF 429
P P G F
Sbjct: 381 PWASGLPMHGMF 392
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 238 bits (607), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 200/394 (50%), Gaps = 65/394 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW ACAG +V +P + VFYFPQGH E S N R +P I C V +++
Sbjct: 41 ELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVE 100
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES----EKPASFAKTLTQSD 121
A+ +TDEVYA++ L+P + EDN + V S + + SF KTLT SD
Sbjct: 101 LKAEPDTDEVYAQLTLLPELKQQ---EDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 157
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 158 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 217
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 218 WSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSVISSHS-------- 266
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
M+L + + NT G F
Sbjct: 267 --------------------MHLGVLATAWHAVNT---------------------GTMF 285
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI + +D
Sbjct: 286 TVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEAPEQR-FTGTIVGMGDSD 344
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P WP S WR L+V WDE + +RVSPW +E
Sbjct: 345 PAGWPESKWRSLKVRWDEASSIPRPERVSPWQIE 378
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCK-VFLESEDVGRTLDLSVLSSYEELYRRLAIMF- 647
EK SS + +R+ G+ T CK V + +GR++DL+ + YEEL L MF
Sbjct: 704 EKPSSQQA--SRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFD 761
Query: 648 ------GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
G ++ M V+Y D G + GD+P+ +F ++ I
Sbjct: 762 FNGELKGPKKEWM---VVYTDNEGDMMLVGDDPWIEFCDMVHKIFI 804
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 238 bits (607), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 203/394 (51%), Gaps = 68/394 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + + +PP I C V +++
Sbjct: 27 ELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMFNLPPKILCSVVNVE 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNL-SLNSVGSDSESEKPASFAKTLTQSDANN 124
A++++DEVYA+I L P + + N L SL+ + E SF KTLT SD +
Sbjct: 87 LRAEADSDEVYAQIMLQP------EADQNELTSLDPEPQEPEKCTAHSFCKTLTASDTST 140
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG P+RHLLTTGWS
Sbjct: 141 HGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWSV 200
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVAGD+ +F+R ++G+L VG+RR + + N PSS +S+
Sbjct: 201 FVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQV---NSMPSSVISSH------------ 245
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+M+L + + + +T G F V
Sbjct: 246 ----------------SMHLGVLATASHAIST---------------------GTLFSVF 268
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S +F V + A + GMRFKM FE +++ F GTI + +S
Sbjct: 269 YKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDEAPERR-FSGTIIGIGSLPAMS 327
Query: 365 ---WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR L+V WDEP + R+SPW VE
Sbjct: 328 KSLWADSDWRSLKVQWDEPSSILRPDRISPWEVE 361
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 198/399 (49%), Gaps = 65/399 (16%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
V K+++ +LWHACAG +V +P + S VFYFPQGH+E S ++S+IP +
Sbjct: 40 VRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPSQL 99
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
C+V + AD ETDE+YA++ L P+ + F ++ L SE F KTL
Sbjct: 100 LCQVQNATLHADKETDEIYAQMTLQPLNSEREVFPISDFGLKHSKHPSEF-----FCKTL 154
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q +V +D+H W FRHIYRG P+RHL
Sbjct: 155 TASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 214
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV K+L RA D L
Sbjct: 215 LTTGWSLFVGSKRL---------RAGDSVL------------------------------ 235
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R G +N + S + + ++ A AA+
Sbjct: 236 ----------FIRDEKSQL-RVGVRRVNRQQTTLPSSVLSADSMHIG--VLAAAAHAAAN 282
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + A K+ GMRF M FETE+S + +MGTI
Sbjct: 283 RSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGK-RRYMGTIVG 341
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR +QV WDEP RVS W +E
Sbjct: 342 ISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 380
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S ++ H+ ++ D SG T + ++SS F N S+Q +
Sbjct: 770 SSSQDVQSQITSASLAESHAYPLRDIPDNSGGTSSSHVDFDESS---FLQNNSWQQVPAP 826
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
+ T + KV ++ VGR++D++ +YEEL R + MFG++ +L+ ++Y D
Sbjct: 827 IRT-YTKV-QKAGSVGRSIDVTTFKNYEELIRAIECMFGLD--GLLNDTKGSGWKLVYVD 882
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 883 YESDVLLVGDDPWEEFVGCVRCIRIL 908
>gi|304308227|gb|ADL70426.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 286
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/310 (47%), Positives = 186/310 (60%), Gaps = 32/310 (10%)
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
SRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I
Sbjct: 1 SRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP 60
Query: 405 LSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--- 460
L+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR
Sbjct: 61 LTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNA 120
Query: 461 HAQFGISSSDFH---VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMG 517
H +G+SSSD H +N S + R+ D +E C LTMG
Sbjct: 121 HQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMG 173
Query: 518 NSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSD 577
+ N KS KK +LFG+ I E+Q+S S D + ++ +
Sbjct: 174 TTPCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQI 216
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
SG +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SY
Sbjct: 217 SSGGSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSY 276
Query: 637 EELYRRLAIM 646
EEL R+L+ M
Sbjct: 277 EELSRKLSDM 286
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 163/429 (37%), Positives = 214/429 (49%), Gaps = 77/429 (17%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGH--AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLAD 69
LWHACAG +V +P S V Y PQGH A + G + + +PP + CRV ++ AD
Sbjct: 26 LWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGRIRGEVAVALPPHVACRVVDVELCAD 85
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS---------ESEKPASFAKTLTQS 120
+ TDEVYA++ L E + + NL + + +S F KTLT S
Sbjct: 86 AATDEVYARLAL----RAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTAS 141
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LD+ P Q +VAKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 201
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS+FVN+KKLV+GD+++FLR DG+L +G+ ++ NE
Sbjct: 202 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGV---RRATQLKNE----------------A 242
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA-ASGK 299
F FS E +KM L AVA + G
Sbjct: 243 IFKAFS----SESSKM------------------------------RTLSAVADSLKHGS 268
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSV 357
F + Y PRA+ E+ V + H +C GMRFK +E+ED + R S G I+ V
Sbjct: 269 VFHICYNPRATASEYVVPYWKFVKSFN-HPVCIGMRFKFHYESEDVNERRS---GMIAGV 324
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH-LSPFSPARKKL 415
DPI WP S WR L V W++ + RVSPW +E+V ++ V H LS S R KL
Sbjct: 325 SEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKL 384
Query: 416 RLPQQLDFP 424
LD P
Sbjct: 385 CPQGNLDVP 393
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/147 (78%), Positives = 127/147 (86%), Gaps = 11/147 (7%)
Query: 107 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
+EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFR
Sbjct: 6 NEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFR 65
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPS 226
HIYRGTPRRHLLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N
Sbjct: 66 HIYRGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSN---- 121
Query: 227 SGWNSNNGSCVTGNPFGGFSCFLREEE 253
G S+N NP+ GFS FLR++E
Sbjct: 122 -GLASDN------NPYPGFSGFLRDDE 141
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 150/391 (38%), Positives = 198/391 (50%), Gaps = 65/391 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P + V+YFPQGH E S++ PS +P I C+V+S+
Sbjct: 22 ELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFD-LPSKILCKVASV 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ +TDEVYA+I LVP E+D + +S + + E SF KTLT SD +
Sbjct: 81 QRKAEPDTDEVYAQITLVP----EVD-QSEVMSPDDPLQEPERCIVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD T PP Q ++A D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVAGD+ +FLR +GDL VG+RR + PSS +S+
Sbjct: 196 FVSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQAN---MPSSVISSH------------ 240
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+M+L + + + +TR F +
Sbjct: 241 ----------------SMHLGVLATASYALSTRSM---------------------FSIF 263
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S EF V + A GMRFKM FE E+ F GTI V+
Sbjct: 264 YKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERR-FSGTIVGVEADKSSG 322
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR L+V WDEP + RVSPW +E
Sbjct: 323 WADSEWRSLKVQWDEPSSIIRPDRVSPWELE 353
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---- 656
RS Q ++S KV ++ VGR +DL+ YE+L ++L MF I+ S
Sbjct: 535 RSPQESQSKQIRSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKNW 594
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+++F +++ I
Sbjct: 595 QVVYTDDEDDMMMVGDDPWNEFCSMVRKIFI 625
>gi|304308221|gb|ADL70423.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 285
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 146/309 (47%), Positives = 186/309 (60%), Gaps = 31/309 (10%)
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
SRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I
Sbjct: 1 SRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP 60
Query: 405 LSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--- 460
L+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR
Sbjct: 61 LTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNA 120
Query: 461 HAQFGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGN 518
H +G+SSSD H N+ S + R+ D +E C LTMG
Sbjct: 121 HQYYGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGT 173
Query: 519 SNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
+ N KS KK +LFG+ I E+Q+S S D + ++ +
Sbjct: 174 TPCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQIS 216
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
SG +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYE
Sbjct: 217 SGGSNQNGVAGRELSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYE 276
Query: 638 ELYRRLAIM 646
EL R+L+ M
Sbjct: 277 ELSRKLSDM 285
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 149/405 (36%), Positives = 200/405 (49%), Gaps = 71/405 (17%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFC 59
K+I+ +LWHACAG +V +P + S +YFPQGH+E S ++S+IP + C
Sbjct: 41 KAINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLC 100
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V ++ AD ETDE+YA++ L P+ + + F + L SE F KTLT
Sbjct: 101 QVQNVTLHADKETDEIYAQMSLKPVNSEKDVFPVPDFGLKPSKHPSEF-----FCKTLTA 155
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE +FP LD+T PP Q +V +D+H W FRHIYRG P+RHLLT
Sbjct: 156 SDTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQPKRHLLT 215
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV K+L RA D L
Sbjct: 216 TGWSLFVGAKRL---------RAGDSVL-------------------------------- 234
Query: 240 NPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F+R+E++++ R N + S S ++ G ++ A AA
Sbjct: 235 --------FIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMHIG------VLAAAAHAAA 280
Query: 297 SGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
+ PF + Y PRA EF + A+ KA GMRF M FETE+S + +MGTI
Sbjct: 281 NRSPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEESGK-RRYMGTIV 339
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 400
S DP+ WP S WR LQV WDEP RVS W +E N+
Sbjct: 340 STSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPENI 384
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S D+ SQ+ S D + + +D SG T I +++SS + N S+
Sbjct: 781 SSSQDLQSQITSASLGDSQAFSRQDLADNSGGTSSSNIDLDESSLLQN--NGSWHQVVPP 838
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
+ T + KV ++ VGR++D++ +YEEL + MFG+E +L+ ++Y D
Sbjct: 839 VRT-YTKV-QKTGSVGRSIDVTSFKNYEELCSAIECMFGLE--GLLNDPRGSGWKLVYVD 894
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 895 YENDVLLVGDDPWEEFVGCVRCIRIL 920
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 237 bits (605), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 205/432 (47%), Gaps = 81/432 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH-----SLGSVNFPSSSRIPPLIFCRVSSLK 65
+LWHACAG + +P + V YFPQGH E + P+ + P IFCRV +++
Sbjct: 54 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYD-LQPQIFCRVVNVQ 112
Query: 66 FLADSETDEVYAKIKLVP---IPANEIDFEDNNLSLNSVGSDSES---EKPASFAKTLTQ 119
LA+ E DEVY ++ L+P + ++ ++ D S P F KTLT
Sbjct: 113 LLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTV 172
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLT
Sbjct: 173 SDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLT 232
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQD--------------GDLCVGIRRAKKGIGGGNEYP 225
TGWS FVNQK LV+GD+++FLR QD G+L +GIRRA + G P
Sbjct: 233 TGWSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNG---LP 289
Query: 226 SSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKP 285
S + G N N Y +F
Sbjct: 290 ES---------IVG-----------------------NQNCYPNF--------------- 302
Query: 286 EMVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS 344
L +VA A S K F V Y PRAS EF V +++ G RFKM E ++S
Sbjct: 303 ---LSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMRIEMDES 359
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
G + + DP WP S WR L V WD+ + RVSPW ++ S P +
Sbjct: 360 PERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEIDPSSPQPPLS 419
Query: 405 LSPFSPARKKLR 416
+ SP KK R
Sbjct: 420 IQS-SPRLKKPR 430
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 207/423 (48%), Gaps = 71/423 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH-SLGSVNFPSSSRIPPLIFCRVSSLKFLAD 69
+LWHACAG + +P S V Y PQGH EH + ++S +PP + CRV + AD
Sbjct: 34 ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASAVPPHVLCRVVDVTLHAD 93
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-------------SEKPASFAKT 116
TDEVYA++ L+P + D E + V D + + P F KT
Sbjct: 94 GATDEVYARVSLLP---EDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCKT 150
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PRRH
Sbjct: 151 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRH 210
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FVN+KKL++GD+++FLR +DG L +G+RRA +
Sbjct: 211 LLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQ-----------------LKI 253
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
VT P N+ + N N+ GN V +AVA
Sbjct: 254 VTPIP---------APHNQCSSNSNL-----------GN------------VAQAVATKT 281
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PR + EF V + GMR +M +E++D+S G I
Sbjct: 282 V---FHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASERR-CTGIIIG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ ADPI W S W+ L V WD+ + RVSPW +EL ++ + S R K
Sbjct: 338 SREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPSSKRLKPC 396
Query: 417 LPQ 419
LPQ
Sbjct: 397 LPQ 399
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 200/394 (50%), Gaps = 65/394 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW ACAG +V +P + FYFPQGH E S N R +P I C V +++
Sbjct: 40 ELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVMNVE 99
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES----EKPASFAKTLTQSD 121
A+ +TDEVYA++ L+P + EDN + V S + + SF KTLT SD
Sbjct: 100 LKAEPDTDEVYAQLTLLPELKRQ---EDNGSTEEEVPSAPAAGHVRPRVHSFCKTLTASD 156
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL +G
Sbjct: 157 TSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSG 216
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 217 WSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSVISSHS-------- 265
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
M+L + + NT G F
Sbjct: 266 --------------------MHLGVLATAWHAVNT---------------------GTMF 284
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S EF V +++ ++ GMRFKM FE+E++ F GTI + +D
Sbjct: 285 TVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEAPEQR-FTGTIVGMGDSD 343
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P WP S WR L+V WDE + +RVSPW +E
Sbjct: 344 PAGWPESKWRSLKVRWDEASSIPRPERVSPWQIE 377
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 601 RSFQVTESGLDTGHCK-VFLESEDVGRTLDLSVLSSYEELYRRLAIMF-------GIERS 652
R+ G+ T CK V + +GR++DL+ + YEEL L MF G ++
Sbjct: 717 RNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKE 776
Query: 653 DMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
M V+Y D G + GD+P+ +F ++ I
Sbjct: 777 WM---VVYTDNEGDMMLVGDDPWIEFCDMVHKIFI 808
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/399 (36%), Positives = 196/399 (49%), Gaps = 65/399 (16%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
V K+++ +LWHACAG +V +P + S VFYFPQGH+E S ++S+IP +
Sbjct: 37 VRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPYQL 96
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
C+V ++ AD ETDE+YA++ L P+ + E ++ G F KTL
Sbjct: 97 LCQVQNVTLHADKETDEIYAQMTLQPL-----NSEREVFPISDFGHKHSKHPSEFFCKTL 151
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q +V +D+H W FRHIYRG P+RHL
Sbjct: 152 TASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 211
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV K+L RA D L
Sbjct: 212 LTTGWSLFVGSKRL---------RAGDSVL------------------------------ 232
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E +++ R G +N + S + + ++ A AA+
Sbjct: 233 ----------FIRDERSQL-RVGVRRVNRQQTTLPSSVLSADSMHIG--VLAAAAHAAAN 279
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + A K+ GMRF M FETE+S + +MGTI
Sbjct: 280 RSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFETEESGK-RRYMGTIVG 338
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR +QV WDEP RVS W +E
Sbjct: 339 ISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIE 377
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S ++ H+ ++ D SG T + ++SS F N S+Q +
Sbjct: 765 SSSQDVQSQITSASLTESHAFPLRDIPDNSGGTSSSHVDFDESS---FLQNNSWQQVPAP 821
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
+ T + KV ++ VGR++D++ +YEEL R + MFG++ +L+ ++Y D
Sbjct: 822 IRT-YTKV-QKAGSVGRSIDVTTFKNYEELIRAIECMFGLD--GLLNDTKCSGWKLVYVD 877
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 878 YESDVLLVGDDPWEEFVGCVRCIRIL 903
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 157/423 (37%), Positives = 207/423 (48%), Gaps = 71/423 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH-SLGSVNFPSSSRIPPLIFCRVSSLKFLAD 69
+LWHACAG + +P S V Y PQGH EH + ++S +PP + CRV + AD
Sbjct: 34 ELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAARGAAASAVPPHVLCRVVDVTLHAD 93
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE-------------SEKPASFAKT 116
TDEVYA++ L+P + D E + V D + + P F KT
Sbjct: 94 GATDEVYARVSLLP---EDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHMFCKT 150
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PRRH
Sbjct: 151 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQPRRH 210
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FVN+KKL++GD+++FLR +DG L +G+RRA +
Sbjct: 211 LLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQ-----------------LKI 253
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
VT P N+ + N N+ GN V +AVA
Sbjct: 254 VTPIP---------APHNQCSSNSNL-----------GN------------VAQAVATKT 281
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PR + EF V + GMR +M +E++D+S G I
Sbjct: 282 V---FHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDASERR-CTGIIIG 337
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ ADPI W S W+ L V WD+ + RVSPW +EL ++ + S R K
Sbjct: 338 SREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSGSQMCAPSSKRLKPC 396
Query: 417 LPQ 419
LPQ
Sbjct: 397 LPQ 399
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 166/419 (39%), Positives = 211/419 (50%), Gaps = 74/419 (17%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-------VNFPSSSRIPPLIFCRVSSL 64
LWHACAG + +P + V YFPQGH E +L + V PS +PP +FCRV ++
Sbjct: 23 LWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSX-HLPPQVFCRVLNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS---ESEKPASFAKTLTQSD 121
A+ ETDEVYA++ LVP P E + E SL P F KTLT SD
Sbjct: 82 NLHAEPETDEVYAQVTLVPEPEPETESEPAEKSLVEEEEGINLLHKSTPHMFCKTLTASD 141
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 142 TSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTG 201
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FVNQ+ LV+GD+++FLR DG+L +GIRRA +P S +++ V
Sbjct: 202 WSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRAS--------HPRSIIPTHS---VLSGQ 250
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+G L N ++ S F+ N R AS F
Sbjct: 251 WGSQLSVLSAAANAIS--------SKSMFHIFYNPR------------------ASPSEF 284
Query: 302 EVVY--YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS--RISWFMGTISSV 357
+ Y Y R CV MR FKM FE ED++ R S G I+ +
Sbjct: 285 VIPYRKYVRCINRPVCV-------GMR--------FKMRFEMEDAAERRCS---GVITGI 326
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
DP+ WP+S WR L V WDE ++ RVSPW +E P +++ P KKLR
Sbjct: 327 GDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPALNV----PRLKKLR 381
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 206/416 (49%), Gaps = 64/416 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS-----RIPPLIFCRVSSLK 65
+LWHACAG +V +P VFYFPQGH E S N S ++P I C V ++
Sbjct: 58 ELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIYKLPSKILCTVINID 117
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A+ +TDEV+A++ LVP E ++ ++ + + SF KTLT SD +
Sbjct: 118 LKAEPDTDEVFAQMTLVP----ESTQDEKDIIIETPPPLQSRPHVHSFCKTLTASDTSTH 173
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A+ P LD PP Q +VAKD+HG+ W FRHI+RG PRRHLL +GWS F
Sbjct: 174 GGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPRRHLLQSGWSVF 233
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+LVAGD+ +FLR ++G+L VG+R + + + PSS +S++
Sbjct: 234 VSSKRLVAGDAFIFLRGENGELRVGVR---RAMRQQSNVPSSVISSHS------------ 278
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
M+L + + + T G F V Y
Sbjct: 279 ----------------MHLGVLATASHAIQT---------------------GTMFTVYY 301
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
PR S EF V + +++ ++ GMRFKM FE E++ F GTI + D W
Sbjct: 302 KPRTSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPE-QRFTGTIIGIGDVDSTRW 360
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
P S WR L+V WDE + ++SPW +E + I L+P +R K P L
Sbjct: 361 PESKWRCLKVRWDEQTSVPRPDKISPWQIEPA--LAPIALNPLPVSRTKRPRPNIL 414
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 149/397 (37%), Positives = 195/397 (49%), Gaps = 77/397 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE-----------HSLGSVNFPSSSRIPPLIFC 59
+LWHACAG +V +P + V+YFPQGH E H + S + PS I C
Sbjct: 22 ELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSK------ILC 75
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V+S++ A+ +TDEVYA+I LVP E+D + +S + + E SF KTLT
Sbjct: 76 KVASVQRKAEPDTDEVYAQITLVP----EVD-QSEVMSPDDPLQEPERCIVHSFCKTLTA 130
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A+ P LD T PP Q ++A D+HG W FRHI RG PRRHLLT
Sbjct: 131 SDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRHLLT 190
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ KKLVAGD+++FLR +GDL VG+RR
Sbjct: 191 TGWSVFVSSKKLVAGDALIFLRGANGDLRVGVRR-------------------------- 224
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+R++ N + + + G VL + A S +
Sbjct: 225 --------LMRQQANMPSSVISSHSIILG-------------------VLATASYALSTR 257
Query: 300 P-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
F + Y PR S EF V + A GMRFKM FE E+ F GTI V+
Sbjct: 258 SMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERR-FSGTIVGVE 316
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR L+V WDEP + RVSPW +E
Sbjct: 317 ADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELE 353
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---- 656
RS Q ++S KV ++ VGR +DL+ YE+L ++L MF I+ S
Sbjct: 535 RSPQESQSKQIRSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKNW 594
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRL 685
V+Y D + GD+P+++F +++
Sbjct: 595 QVVYTDDEDDMMMVGDDPWNEFCSMVRKI 623
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 156/421 (37%), Positives = 206/421 (48%), Gaps = 81/421 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S + +P I C+V +++
Sbjct: 20 ELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKVVNVE 79
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SFAKTLTQS 120
A++++DEVYA+I L P E D + + +D E +P SF KTLT S
Sbjct: 80 LRAETDSDEVYAQIMLQP----ETDQSEPS------SADPEPHEPEKCNAHSFCKTLTAS 129
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R AE P LD T +PP Q +VAKD+H W FRHI+RG PRRHLLTT
Sbjct: 130 DTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANEWHFRHIFRGQPRRHLLTT 189
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVAGD+ +FLR +GDL VG+RR + + N PSS +S+
Sbjct: 190 GWSVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQL---NNMPSSVISSH-------- 238
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+M+L ++ A ++G
Sbjct: 239 --------------------SMHLG---------------------VLATASHAISTGTL 257
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE +++ F GTI V
Sbjct: 258 FSVFYKPRTSRSEFVVSVNKYLEAKNNKMSVGMRFKMRFEGDEAPERR-FSGTIIGVGSM 316
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLS---PFSPARKKLRL 417
W +S WR L+V WDEP + RVSPW +E P++ S P PAR K
Sbjct: 317 TTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELE-----PLVATSIQPPQPPARNKRAR 371
Query: 418 P 418
P
Sbjct: 372 P 372
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 80/180 (44%), Gaps = 29/180 (16%)
Query: 537 FGQPIRTEQQISHSCSDDVVSQVLGKSSSDGH--------SDKVKASS---DGSGSTHEQ 585
F PIR + S+S S D V + + V+A+S D SG+ HEQ
Sbjct: 441 FYWPIRDTRADSYSASIDKVPASRKQEPTTAGCRLFGIEIGSAVEATSPVVDVSGACHEQ 500
Query: 586 ---RISIE-----------KSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLS 631
+ IE KS + +RS T+S KV +E VGR +DL+
Sbjct: 501 PAASVDIESDQLSQPSHVNKSDAPAASSDRSPYETQSRQVRSCTKVIMEGMAVGRAVDLT 560
Query: 632 VLSSYEELYRRLAIMFGI--ERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L YE+L+++L MF I E S L ++Y D + GD+P+S+F K++ I
Sbjct: 561 RLHGYEDLHQKLEEMFDIQGELSASLKKWKLVYTDDEDDMMLVGDDPWSEFCSMVKKVYI 620
>gi|304308231|gb|ADL70428.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 284
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/308 (47%), Positives = 185/308 (60%), Gaps = 31/308 (10%)
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL 405
RISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L
Sbjct: 1 RISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPL 60
Query: 406 SPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---H 461
+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR H
Sbjct: 61 TSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAH 120
Query: 462 AQFGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNS 519
+G+SSSD H N+ S + R+ D +E C LTMG +
Sbjct: 121 QYYGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTT 173
Query: 520 NQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGS 579
N KS KK +LFG+ I E+Q+S S D + ++ + S
Sbjct: 174 PCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQISS 216
Query: 580 GSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
G +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEE
Sbjct: 217 GGSNQNGVAGRELSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEE 276
Query: 639 LYRRLAIM 646
L R+L+ M
Sbjct: 277 LSRKLSDM 284
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 238/471 (50%), Gaps = 76/471 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ ++ +LWHACAG +V +P + S V YFPQGH+E S N PS +PP + C
Sbjct: 18 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ ++ AD ETDEVYA++ L P+ A E + +G+ S++P + F KTLT
Sbjct: 78 QLHNVTMHADIETDEVYAQMTLQPLTAQE---QKEPYLPAELGA--PSKQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 193 TTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHL-- 247
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G + ++ + +S T R P + +A
Sbjct: 248 ---------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLA----- 281
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
K + VY+ R V MR L FETE+SS + +MGTI+ +
Sbjct: 282 KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
D WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R L+ P
Sbjct: 321 DLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLR--LKRP 376
Query: 419 QQLDFP-FDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
FP F G + LG +S L L D GIQ G++
Sbjct: 377 WPTGFPSFHG------LKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVA 421
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD+S SSY +L LA MFG+ E D L +++ D +
Sbjct: 785 VKVY-KSGSFGRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDRENDVLL 843
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 844 LGDDPWPEFVNSVWCIKILSPQEVQDMGK 872
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 211/421 (50%), Gaps = 79/421 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 24 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 84 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + PSS +S+
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRA---LRHQTTIPSSVISSH-- 253
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
NM+L VL
Sbjct: 254 --------------------------NMHLG----------------------VLATAWH 265
Query: 295 AASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A + VYY PR S EF V +++ ++ GMRFKM FE E+++ F GT
Sbjct: 266 AVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE-QRFTGT 324
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +DP W +S WR L+V WDEP + +RVSPW +E ++ H++P P R
Sbjct: 325 IVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRF 381
Query: 414 K 414
K
Sbjct: 382 K 382
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH-VLYQDASGAIKRTG 671
KV + +GR++DL+ + Y+EL L MF + +S S V+Y D G I G
Sbjct: 706 KVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVG 765
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F ++ I
Sbjct: 766 DDPWNEFCDMVHKIFI 781
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 236 bits (602), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 211/421 (50%), Gaps = 79/421 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 26 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 85
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 86 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 140
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 141 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 200
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + PSS +S+
Sbjct: 201 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRA---LRHQTTIPSSVISSH-- 255
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
NM+L VL
Sbjct: 256 --------------------------NMHLG----------------------VLATAWH 267
Query: 295 AASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A + VYY PR S EF V +++ ++ GMRFKM FE E+++ F GT
Sbjct: 268 AVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGT 326
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +DP W +S WR L+V WDEP + +RVSPW +E ++ H++P P R
Sbjct: 327 IVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRF 383
Query: 414 K 414
K
Sbjct: 384 K 384
Score = 40.0 bits (92), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH-VLYQDASGAIKRTG 671
KV + +GR++DL+ + Y+EL L MF + +S S V+Y D G I G
Sbjct: 708 KVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVG 767
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F ++ I
Sbjct: 768 DDPWNEFCDMVHKIFI 783
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/471 (35%), Positives = 238/471 (50%), Gaps = 76/471 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ ++ +LWHACAG +V +P + S V YFPQGH+E S N PS +PP + C
Sbjct: 18 RVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ ++ AD ETDEVYA++ L P+ A E + +G+ S++P + F KTLT
Sbjct: 78 QLHNVTMHADIETDEVYAQMTLQPLTAQE---QKEPYLPAELGA--PSKQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA + PSS +S++
Sbjct: 193 TTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANR---PQTVMPSSVLSSDSMHL-- 247
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
G + ++ + +S T R P + +A
Sbjct: 248 ---------------------GLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLA----- 281
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
K + VY+ R V MR L FETE+SS + +MGTI+ +
Sbjct: 282 KYVKAVYHTR------------VSVGMRFRML--------FETEESS-VRRYMGTITGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
D WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R L+ P
Sbjct: 321 DLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLR--LKRP 376
Query: 419 QQLDFP-FDGQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
FP F G + LG +S L L D GIQ G++
Sbjct: 377 WPTGFPSFHG------LKEDDLGLNSQLMWLRGDGLDRGIQPLNFPGIGVA 421
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 612 TGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI--ERSDMLS---HVLYQDASGA 666
T KV+ +S GR+LD+S S Y +L LA MFG+ E D L +++ D
Sbjct: 782 TTFVKVY-KSGSFGRSLDISKFSRYHQLRSELAHMFGLEGELEDPLRSGWQLVFVDREND 840
Query: 667 IKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
+ GD+P+ +F+ S + IL +G+
Sbjct: 841 VLLLGDDPWPEFVNSVWCIKILSPQEVQDMGK 872
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 150/421 (35%), Positives = 211/421 (50%), Gaps = 79/421 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 24 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 84 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + PSS +S+
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRA---LRHQTTIPSSVISSH-- 253
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
NM+L VL
Sbjct: 254 --------------------------NMHLG----------------------VLATAWH 265
Query: 295 AASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A + VYY PR S EF V +++ ++ GMRFKM FE E+++ F GT
Sbjct: 266 AVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGT 324
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +DP W +S WR L+V WDEP + +RVSPW +E ++ H++P P R
Sbjct: 325 IVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRF 381
Query: 414 K 414
K
Sbjct: 382 K 382
>gi|284811265|gb|ADB96371.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 269
Score = 236 bits (601), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 185/308 (60%), Gaps = 60/308 (19%)
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+S+VQVADPI WPNSPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RK
Sbjct: 1 VSAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RK 59
Query: 414 KLRLPQQLDFPFDG-QFTM--PLFSGNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG 465
K+R+PQ +FPF G +F + P F+ N G S +C LS +N AGIQGAR AQ FG
Sbjct: 60 KIRIPQPFEFPFHGTKFPIFSPGFANNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFG 117
Query: 466 ---------ISSSDFHVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLT 515
++ S + NNKL S +FLSS F P + + +S N+SC LT
Sbjct: 118 SPSPSLLSDLNLSSYTGNNKLHSPAMFLSS---FNPRHHHYQA---RDSENSNNISCSLT 171
Query: 516 MGNSNQNLEKSE---NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
MGN +K + ++K HQF+LFGQPI TEQQ+ + + L + + +
Sbjct: 172 MGNPAMVQDKKKSVGSVKTHQFVLFGQPILTEQQVMNR------KRFLEEEAEAEEEKGL 225
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSV 632
A WN S Q GL+TGHCKVF+ESEDVGRTLDLSV
Sbjct: 226 VARG--------------------LTWNYSLQ----GLETGHCKVFMESEDVGRTLDLSV 261
Query: 633 LSSYEELY 640
+ SY+ELY
Sbjct: 262 IGSYQELY 269
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 225/734 (30%), Positives = 324/734 (44%), Gaps = 129/734 (17%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL---- 56
M + +++ QLW ACAG +V +P + VFYFPQGH E S N RIP
Sbjct: 76 MGIISEAVSSQLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPS 135
Query: 57 -IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
I CRV + LA+ ETDEVYA+I L P E D + S +S ++ + SF K
Sbjct: 136 KILCRVVHTRLLAEQETDEVYAQITLQP----EAD-QTEPKSPDSCPDEAPKQTVHSFCK 190
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
LT SD + GGFSV R A P LD + P Q +VA+D+HG W+F+HI+RG PRR
Sbjct: 191 ILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRR 250
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLTTGWSTFV K+LVA GD V +R +NG
Sbjct: 251 HLLTTGWSTFVTSKRLVA-----------GDAFVFLR------------------GDNGE 281
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
LR ++AR + +S S S VL + A
Sbjct: 282 -------------LRVGVRRLARQQSPMPSSVISSQSMHLG-----------VLATASHA 317
Query: 296 ASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
+ + VVYY PR S +F + + A+ + GMRFKM FE EDS F GTI
Sbjct: 318 VTTQTLFVVYYKPRTS--QFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERR-FTGTI 374
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ P W NS WR L++ WDEP +Q +RVS W +E ++L+ P K
Sbjct: 375 VGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQ-PPV--K 430
Query: 415 LRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSD------------------------ 450
++ P+ LD P + + S SSP L+
Sbjct: 431 IKRPRPLDLPVAENTSSSVPSPFWYAGSSPSHELTQLGGVTEVQSSESQVHWPPKPKEIN 490
Query: 451 -----NTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFD--GILTSH 503
N++ G R GI SS VN + L+ Q T +S+ IL+ +
Sbjct: 491 GNVIHNSNCGSSIGRPE--GIWSSSPSVN------VSLNLFQDLTEDSKTVSTRSILSGY 542
Query: 504 TNSSENLSCLLTMGNSNQNLEKSENIKKH-QFLLFGQPI----RTEQQISHSCSDDVVSQ 558
S LS G + +EK + I+ LFG + + + SC S
Sbjct: 543 NTS---LSSRPNNGLISDQVEKGKRIEASIGCRLFGIDLTNNSKATALLEMSCPSITSSS 599
Query: 559 VLGK-SSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKV 617
V G S+ +D+++ + D S S++EQ+ + ++S E +S + KV
Sbjct: 600 VKGPISAVVSEADRIQ-NLDVSKSSNEQKQVVPEASQKETQGRQSCTPS----SRTRTKV 654
Query: 618 FLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDE 673
++ VGR +DL+ L Y+EL L MF I + ++ V++ D G + GD+
Sbjct: 655 QMQGVAVGRAVDLTALEGYDELISELEKMFEI-KGELCPRNKWEVVFTDDEGDMMLVGDD 713
Query: 674 PFSDFMKSAKRLTI 687
P+ +F K +++ I
Sbjct: 714 PWQEFCKMVRKIFI 727
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 203/393 (51%), Gaps = 71/393 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS------RIPPLIFCRVSSL 64
+LW ACAG +V++P + VFYFPQGH E + S N S ++PP I C+V S+
Sbjct: 24 ELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIPDFKLPPKILCQVLSV 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA+I L P E D + SL+ + + SF K LT SD +
Sbjct: 84 MLKAEHDTDEVYAQITLKP----EED-QSEPTSLDPPIVEPTKQMFHSFVKILTASDTST 138
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +V +D+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 139 HGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 198
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVAGD+ VFLR ++GDL VG+RR + N P+S +S
Sbjct: 199 FVSSKRLVAGDAFVFLRGENGDLRVGVRRLAR---HQNTMPASVISSQ------------ 243
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
+M+L + + + NT+ F V
Sbjct: 244 ----------------SMHLGVLATASHAVNTQTM---------------------FLVF 266
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQVADPI 363
Y PR S +F V + AM+ + G RF+M FE E+S RI F GTI V + D
Sbjct: 267 YKPRIS--QFIVSVNKYMEAMKHGFSLGTRFRMRFEGEESPERI--FTGTI--VGIGDLS 320
Query: 364 S-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
S WP S WR LQV WDEP +Q +VSPW +E
Sbjct: 321 SQWPASTWRSLQVQWDEPTTVQRPDKVSPWEIE 353
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----VLYQDASGAIKRTG 671
KV ++ VGR +DL++L SY+EL + L MF I+ +L V++ D G + G
Sbjct: 459 KVQMQGIAVGRAVDLTLLKSYDELIKELEEMFEIQ-GQLLPRDKWIVVFTDDEGDMMLAG 517
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F K AK++ I
Sbjct: 518 DDPWNEFCKMAKKIFI 533
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 235 bits (600), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 201/400 (50%), Gaps = 71/400 (17%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFC 59
K+I+ +LWHACAG +V +P + S V+YFPQGH+E S ++S+IP + C
Sbjct: 39 KAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMC 98
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V ++ AD +TDE+YA++ L P+ + + F + L SE F KTLT
Sbjct: 99 QVHNVTLHADKDTDEIYAQMSLQPVNSEKDIFPIPDFGLKPSKHPSEF-----FCKTLTA 153
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE +FP LDY+ PP Q ++ +D+H + FRHIYRG P+RHLLT
Sbjct: 154 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLT 213
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ K+L AGD+++
Sbjct: 214 TGWSVFVSAKRLRAGDAVL----------------------------------------- 232
Query: 240 NPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F+R+E++++ R N S S S ++ G ++ A AA
Sbjct: 233 --------FIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIG------VLAAAAHAAA 278
Query: 297 SGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
+ PF + Y PRA EF + A K+ GMRF M FETE+S + +MGTI
Sbjct: 279 NRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGK-RRYMGTIV 337
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+SWP S WR LQV WDE RVS W +E
Sbjct: 338 GISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 377
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S +D + D SG T + ++SS N S+Q
Sbjct: 778 STSQDVQSQITSVSLADSQAFSRPDFLDNSGGTSSSNVDFDESS---LLQNSSWQQVAPP 834
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
+ KV + VGR++D++ +YEEL + MFG+E +L+ ++Y D
Sbjct: 835 PMRTYTKV-QKMGSVGRSIDVASFKNYEELCSAIECMFGLE--GLLNDQKGSGWKLVYVD 891
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 892 YENDVLLVGDDPWKEFVGCVRCIRIL 917
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 235 bits (599), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 147/418 (35%), Positives = 208/418 (49%), Gaps = 81/418 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+YFPQGH E S N + + PL I C++ ++
Sbjct: 30 ELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKLMNI 89
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD------------SESEKPAS 112
+ A+ +TDEVYA++ L+P +D N S + +E + S
Sbjct: 90 ELKAEPDTDEVYAQLTLLPDKK-----QDENTSTTVENEEAEEEVVPHAPPTNEGPRIHS 144
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG
Sbjct: 145 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQ 204
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS +S+
Sbjct: 205 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRALRHQTTIPSSVISSH 261
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+ M+L + + NT
Sbjct: 262 S----------------------------MHLGVLATAWHAVNT---------------- 277
Query: 293 ALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
G F V Y PR S EF V +++ ++ GMRFKM FE E+++ F G
Sbjct: 278 -----GSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTG 331
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
TI + +DP W +S WR L+V WDE + +RVSPW +E P I SP +P
Sbjct: 332 TIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIE-----PAISPSPVNP 384
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/402 (35%), Positives = 202/402 (50%), Gaps = 71/402 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
V ++I+ +LWHACAG +V +P + S V+YFPQGH+E S ++S+IP +
Sbjct: 15 VSEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQL 74
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
C+V ++ AD +TDE+YA++ L P+ + + F + L SE F KTL
Sbjct: 75 MCQVHNVTLHADKDTDEIYAQMSLQPVNSEKDIFPIPDFGLKPSKHPSEF-----FCKTL 129
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++ +D+H + FRHIYRG P+RHL
Sbjct: 130 TASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHL 189
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K+L AGD+++
Sbjct: 190 LTTGWSVFVSAKRLRAGDAVL--------------------------------------- 210
Query: 238 TGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
F+R+E++++ R N S S S ++ G ++ A
Sbjct: 211 ----------FIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIG------VLAAAAHA 254
Query: 295 AASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
AA+ PF + Y PRA EF + A K+ GMRF M FETE+S + +MGT
Sbjct: 255 AANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGK-RRYMGT 313
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
I + DP+SWP S WR LQV WDE RVS W +E
Sbjct: 314 IVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 355
Score = 48.1 bits (113), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S +D + D SG T + ++SS N S+Q
Sbjct: 756 STSQDVQSQITSVSLADSQAFSRPDFLDNSGGTSSSNVDFDESS---LLQNSSWQQVAPP 812
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
+ KV + VGR++D++ +YEEL + MFG+E +L+ ++Y D
Sbjct: 813 PMRTYTKV-QKMGSVGRSIDVASFKNYEELCSAIECMFGLE--GLLNDQKGSGWKLVYVD 869
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 870 YENDVLLVGDDPWKEFVGCVRCIRIL 895
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 209/419 (49%), Gaps = 82/419 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +P L V+YFPQGH E S N + + PL I C++ ++
Sbjct: 31 ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVG-------------SDSESEKPA 111
+ A+ +TDEVYA++ L+P +D N S + SE +
Sbjct: 91 ELKAEPDTDEVYAQLTLLPDKK-----QDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SF KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+R + + PSS +S
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVR---RALRHQTTIPSSVISS 262
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
++ M+L + + NT
Sbjct: 263 HS----------------------------MHLGVLATAWHAVNT--------------- 279
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
G F V Y PR S EF V + +++ ++ GMRF+M FE E+++ F
Sbjct: 280 ------GSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAAEQR-FT 332
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
GTI + V+DP W +S WR L+V WDE + +RVSPW +E P + SP +P
Sbjct: 333 GTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIE-----PAVSPSPVNP 386
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 209/419 (49%), Gaps = 82/419 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +P L V+YFPQGH E S N + + PL I C++ ++
Sbjct: 31 ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVG-------------SDSESEKPA 111
+ A+ +TDEVYA++ L+P +D N S + SE +
Sbjct: 91 ELKAEPDTDEVYAQLTLLPDKK-----QDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SF KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+R + + PSS +S
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVR---RALRHQTTIPSSVISS 262
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
++ M+L + + NT
Sbjct: 263 HS----------------------------MHLGVLATAWHAVNT--------------- 279
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
G F V Y PR S EF V + +++ ++ GMRF+M FE E+++ F
Sbjct: 280 ------GSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAAEQR-FT 332
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
GTI + V+DP W +S WR L+V WDE + +RVSPW +E P + SP +P
Sbjct: 333 GTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIE-----PAVSPSPVNP 386
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 159/415 (38%), Positives = 207/415 (49%), Gaps = 74/415 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-------FPSSSRIPPLIFCRVSS 63
+LW ACAG +V++P VFYFPQGH E + N P + +PP I CRV S
Sbjct: 21 ELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVVDQEIPDFN-LPPKILCRVLS 79
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A+ ETDEVYA+I L P E D + SL+ + + SF K LT SD +
Sbjct: 80 VMLKAEHETDEVYAQITLQP----EED-QSEPTSLDPPLVEPAKQSVDSFVKILTASDTS 134
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A P LD Q +VA+D+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 135 THGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWS 194
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
TFV K+LVAGD+ VFLR Q GDL VG+RR + + P+S +S
Sbjct: 195 TFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAR---QQSTMPASVISSQ----------- 240
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L + + + NT+ F V
Sbjct: 241 -----------------SMHLGVLATASHAVNTKTL---------------------FVV 262
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQVADP 362
Y PR S +F + + AAM++ + GMRF+M FE E+S RI F GTI V D
Sbjct: 263 FYKPRIS--QFIIGVNKYMAAMKIGFPIGMRFRMRFEGEESPERI--FTGTI--VGTGDL 316
Query: 363 IS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
S WP S WR LQ+ WDEP +Q +VS W +E S V+ +P P K R
Sbjct: 317 SSQWPASKWRSLQIQWDEPSTVQRPNKVSTWEIEPFSPS-VLTPTPTQPQSKSKR 370
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 200/390 (51%), Gaps = 61/390 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +P + VFYFPQGH E S N + + PL I C+V ++
Sbjct: 25 ELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKVMNV 84
Query: 65 KFLADSETDEVYAKIKLVPIPANE--IDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
+ A+ +TDEVYA++ L+P + + E+ + ++ + +E + SF KTLT SD
Sbjct: 85 ELKAEQDTDEVYAQLTLLPEKKQDENVSKEEEEVVPDAPPAVAERTRVHSFCKTLTASDT 144
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A+ P LD + PP Q +VAKD+HG W FRHI+RG PRRHLL +GW
Sbjct: 145 STHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFRGQPRRHLLQSGW 204
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FV+ K+LVAGD+ +FLR ++G+L VG+RRA + PSS +S+
Sbjct: 205 SVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRAN---IPSSVISSH---------- 251
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M+L + NT G F
Sbjct: 252 ------------------SMHLGVLATAWHVANT---------------------GTMFT 272
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S EF V +++ + GMRFKM FE E+++ F GTI + +DP
Sbjct: 273 VYYKPRTSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGEEAAEQR-FTGTIVGIGDSDP 331
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPW 392
W +S WR L+V WDE + +RVSPW
Sbjct: 332 SGWVDSKWRSLKVRWDEASSVPRPERVSPW 361
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/429 (38%), Positives = 214/429 (49%), Gaps = 77/429 (17%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGH--AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLAD 69
LWHACAG +V +P S V Y PQGH A + G + + +PP + CRV ++ AD
Sbjct: 83 LWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVALPPHVACRVVDVELCAD 142
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS---------ESEKPASFAKTLTQS 120
+ TDEVYA++ L E + + NL + + +S F KTLT S
Sbjct: 143 AATDEVYARLAL----RAEGEVFERNLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTAS 198
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LD+ P Q +VAKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 199 DTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 258
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS+FVN+KKLV+GD+++FLR DG+L +G+ ++ NE
Sbjct: 259 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGV---RRATQLKNE----------------A 299
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA-ASGK 299
F FS E +KM L AVA + G
Sbjct: 300 IFKAFS----SESSKM------------------------------RTLSAVADSLKHGS 325
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSV 357
F + Y PRA+ E+ V + H +C GMRFK FE+ED + R S G I+ V
Sbjct: 326 VFHICYNPRATASEYVVPYWKFVKSFN-HPVCIGMRFKFHFESEDVNERRS---GMIAGV 381
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH-LSPFSPARKKL 415
DPI WP S WR L V W++ + RVSPW +E+V ++ V H LS S R KL
Sbjct: 382 SEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKL 441
Query: 416 RLPQQLDFP 424
LD P
Sbjct: 442 CPQGNLDVP 450
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 209/419 (49%), Gaps = 82/419 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +P L V+YFPQGH E S N + + PL I C++ ++
Sbjct: 31 ELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCKLMNM 90
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVG-------------SDSESEKPA 111
+ A+ +TDEVYA++ L+P +D N S + SE +
Sbjct: 91 ELKAEPDTDEVYAQLTLLPDKK-----QDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SF KTLT SD + GGFSV R A+ P LD + PP Q +VA+D+HG W+FRHI+RG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRG 205
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+R + + PSS +S
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVR---RALRHQTTIPSSVISS 262
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
++ M+L + + NT
Sbjct: 263 HS----------------------------MHLGVLATAWHAVNT--------------- 279
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
G F V Y PR S EF V + +++ ++ GMRF+M FE E+++ F
Sbjct: 280 ------GSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEEAAEQR-FT 332
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
GTI + V+DP W +S WR L+V WDE + +RVSPW +E P + SP +P
Sbjct: 333 GTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIE-----PAVSPSPVNP 386
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 151/422 (35%), Positives = 207/422 (49%), Gaps = 71/422 (16%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 33 AKKVINSELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQL 92
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDEVYA++ L P+ + E + + ++GS ++S+ P F K
Sbjct: 93 LCQVHNITMHADKETDEVYAQMTLQPV-----NSETDVFPIPALGSYAKSKHPPEYFCKN 147
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 148 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 207
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 208 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 227
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R S S ++ G ++ A
Sbjct: 228 ---------VLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIG------VLAAAAH 272
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F + Y PR S F V + A V GMRF M FETE+SS+ + GT
Sbjct: 273 AASSGSSFTIYYNPRTSPSPFVVPLARYNKANYVQQSVGMRFAMMFETEESSK-RRYTGT 331
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I V DPI WPNS WR LQV WDE + +RVS W +E N V S + R+
Sbjct: 332 IVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENALVFPSSSLNSKRQ 391
Query: 414 KL 415
L
Sbjct: 392 CL 393
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 144/400 (36%), Positives = 197/400 (49%), Gaps = 71/400 (17%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFC 59
K+I+ +LWHACAG +V +P + S V+YFPQGH+E S ++S+IP + C
Sbjct: 41 KAINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMC 100
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V ++ AD ++DE+YA++ L P+ + + F + L +E F KTLT
Sbjct: 101 QVQNVTLHADKDSDEIYAQMSLQPVNSEKDVFLVPDFGLRPSKHPNEF-----FCKTLTA 155
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE +FP LDYT PP Q ++ +D+H W FRHIYRG P+RHLLT
Sbjct: 156 SDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPKRHLLT 215
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV K+L RA D L
Sbjct: 216 TGWSLFVGAKRL---------RAGDSVL-------------------------------- 234
Query: 240 NPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F+R+E++++ R N + S S ++ G ++ A AA
Sbjct: 235 --------FIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIG------VLAAAAHAAA 280
Query: 297 SGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
+ PF + Y PRA EF + A K GMRF M FETE+S + +MGTI
Sbjct: 281 NRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESGK-RRYMGTIV 339
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ DP+ WP S WR LQV WDEP RVS W +E
Sbjct: 340 GISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 14/146 (9%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S D + + D S T + ++ S N S++
Sbjct: 777 SSSQDVQSQITSASLGDSQAFSRQEFHDNSAGTSSCNVDFDEGS---LLQNGSWKQVVPP 833
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
L T + KV ++ VGR++D++ +Y+EL + MFG+E +L+ ++Y D
Sbjct: 834 LRT-YTKV-QKAGSVGRSIDVTSFKNYDELCSAIECMFGLE--GLLNDPRGSGWKLVYVD 889
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 890 YENDVLLIGDDPWEEFVSCVRCIRIL 915
>gi|298113108|gb|ADB96385.2| auxin response factor 16 [Arabidopsis thaliana]
Length = 283
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/307 (46%), Positives = 183/307 (59%), Gaps = 32/307 (10%)
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
SWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+
Sbjct: 1 SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTS 60
Query: 408 FSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQ 463
FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR H
Sbjct: 61 FSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQY 120
Query: 464 FGISSSDFH---VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
+G+SSSD H +N S + R+ D +E C LTMG +
Sbjct: 121 YGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTP 173
Query: 521 QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
N KS KK +LFG+ I E+Q+S S D + ++ + SG
Sbjct: 174 CNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSG 216
Query: 581 STHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEEL 639
+++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEEL
Sbjct: 217 GSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEEL 276
Query: 640 YRRLAIM 646
R+L+ M
Sbjct: 277 SRKLSDM 283
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 149/398 (37%), Positives = 203/398 (51%), Gaps = 67/398 (16%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFC 59
+S++ +LWHACAG +V +PP+ S V YFPQGH E S + P+ +P I C
Sbjct: 4 RSLNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSKIIC 63
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
+ ++ AD ETDEVYA++ L+PI +E + +L S + +++P F KTLT
Sbjct: 64 LLDNVTLHADPETDEVYAQMILLPIQISEKE------ALLSPDLEVVNKQPTEYFCKTLT 117
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFS+PR AE +FP LD+T PP Q +VA+D+H + W FRHIYRG PRRHLL
Sbjct: 118 ASDTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPRRHLL 177
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+L Q GD + IR K
Sbjct: 178 TTGWSVFVSAKRL-----------QAGDSVLFIRDDK----------------------- 203
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
GN G R N S S ++ G ++ A AA+
Sbjct: 204 GNLLLGI------------RRANRQQTVMPSSVLSSDSMHFG------VLAAASHAAATS 245
Query: 299 KPFEVVYYPRASTPEFCVKASAV-KAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
F++ Y PR S EF + + KA + GMRF+M FETE+SS + ++GTI+ +
Sbjct: 246 SRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESS-VRRYVGTITGL 304
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DPI WP S WR L+V WDE + RVS W +E
Sbjct: 305 GDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIE 342
>gi|298113110|gb|ADB96386.2| auxin response factor 16 [Arabidopsis thaliana]
gi|298113112|gb|ADB96387.2| auxin response factor 16 [Arabidopsis thaliana]
Length = 282
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 143/306 (46%), Positives = 183/306 (59%), Gaps = 31/306 (10%)
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
SWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+
Sbjct: 1 SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTS 60
Query: 408 FSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQ 463
FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR H
Sbjct: 61 FSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQY 120
Query: 464 FGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ 521
+G+SSSD H N+ S + R+ D +E C LTMG +
Sbjct: 121 YGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTPC 173
Query: 522 NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGS 581
N KS KK +LFG+ I E+Q+S S D + ++ + SG
Sbjct: 174 NDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSGG 216
Query: 582 THEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEELY 640
+++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEEL
Sbjct: 217 SNQNGVAGRELSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEELS 276
Query: 641 RRLAIM 646
R+L+ M
Sbjct: 277 RKLSDM 282
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 232 bits (591), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 148/393 (37%), Positives = 196/393 (49%), Gaps = 69/393 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS----VNFPSSSR----IPPLIFCRVS 62
+LW CAG +V +P VFYFPQGH E S +N ++ +PP I CRV
Sbjct: 10 ELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTKPLFDLPPKILCRVM 69
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
++ A+ +TDEVYA+I L+P D +S + +S+ K SF+K LT SD
Sbjct: 70 DVRLQAEKDTDEVYAQIMLMPEGTV-----DEPMSPDPSPPESQRPKVHSFSKVLTASDT 124
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A P LD T P Q +VA+DVHG WKF+HI+RG PRRHLLTTGW
Sbjct: 125 STHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGW 184
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
STFV K+LVAGD+ VFLR ++G+L VG+RRA + PSS +S+
Sbjct: 185 STFVTAKRLVAGDTFVFLRGENGELRVGVRRANR---QQTNMPSSVISSH---------- 231
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M+L + + TR F
Sbjct: 232 ------------------SMHLGVLATACHATQTRSM---------------------FT 252
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S +F + + AM + G+RFKM FE EDS F GT+ V+
Sbjct: 253 VYYKPRTS--QFIISLNKYLEAMSNKFSVGIRFKMRFEGEDSPERR-FSGTVVGVKDCS- 308
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR L+V WDEP + +VSPW +E
Sbjct: 309 THWKDSNWRCLEVHWDEPASISRPDKVSPWEIE 341
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 560 LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFL 619
+ K + D +SD S+ S + E++ ++SS E Q E KV +
Sbjct: 470 ITKPTPDSNSD---PKSEVSKLSEEKKQEPAQASSKEV------QSKEISSTRSRTKVQM 520
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFS 676
+ VGR +DL+VL+ Y EL L +F IE +S +++ D G + GD+P+
Sbjct: 521 QGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELKSRNQWEIVFTDDEGDMMLVGDDPWP 580
Query: 677 DFMKSAKRLTI 687
+F KR+ I
Sbjct: 581 EFCNMVKRIFI 591
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 232 bits (591), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 202/401 (50%), Gaps = 69/401 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K+I+ LW CAG ++ +P + S V YFPQGH+E + S + PS +PP +F
Sbjct: 12 KKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLF 71
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD E DEV+A++ L P ++ + L G ++ + SF+KTLT
Sbjct: 72 CILHNITLHADQENDEVFAQMTLQPF--SQTALLKDPFLLPDFGIQTK-QTIVSFSKTLT 128
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFS+PR AE +FP LD+T PP Q +VA+D+H W FRHIYRG PRRHLL
Sbjct: 129 ASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLL 188
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+L Q GD +
Sbjct: 189 TTGWSVFVSAKRL-----------QAGDTVL----------------------------- 208
Query: 239 GNPFGGFSCFLREEENKMA---RNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
FLR+E+ + R N + + S ++ G ++ A A
Sbjct: 209 ---------FLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIG------VLAAAAHAA 253
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + + + A+ L GMRF+M ETEDSS +MGTI
Sbjct: 254 STNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSS-TRRYMGTI 312
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ + DP+ WPNS WR L+V WDE Q +RVS W +E
Sbjct: 313 TGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIE 353
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-HVLYQDASGAIKRTGDEPFSDFMKSA 682
VGR+LD++ +Y EL L MFG+E +++ D + GD+P+ +F+
Sbjct: 686 VGRSLDITRFKNYHELRNELTRMFGLEHDHKSGWQLVFIDNENDMLLLGDDPWDEFIGCV 745
Query: 683 KRLTILMGS 691
K + IL S
Sbjct: 746 KSIRILSSS 754
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 231 bits (590), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 143/401 (35%), Positives = 202/401 (50%), Gaps = 69/401 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K+I+ LW CAG ++ +P + S V YFPQGH+E + S + PS +PP +F
Sbjct: 12 KKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLF 71
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD E DEV+A++ L P ++ + L G ++ + SF+KTLT
Sbjct: 72 CILHNITLHADQENDEVFAQMTLQPF--SQTALLKDPFLLPDFGIQTK-QTIVSFSKTLT 128
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFS+PR AE +FP LD+T PP Q +VA+D+H W FRHIYRG PRRHLL
Sbjct: 129 ASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLL 188
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
TTGWS FV+ K+L Q GD +
Sbjct: 189 TTGWSVFVSAKRL-----------QAGDTVL----------------------------- 208
Query: 239 GNPFGGFSCFLREEENKMA---RNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
FLR+E+ + R N + + S ++ G ++ A A
Sbjct: 209 ---------FLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIG------VLAAAAHAA 253
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTI 354
++ F + Y PRAS EF + + + A+ L GMRF+M ETEDSS +MGTI
Sbjct: 254 STNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSS-TRRYMGTI 312
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ + DP+ WPNS WR L+V WDE Q +RVS W +E
Sbjct: 313 TGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIE 353
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-HVLYQDASGAIKRTGDEPFSDFMKSA 682
VGR+LD++ +Y EL L MFG+E +++ D + GD+P+ +F+
Sbjct: 674 VGRSLDITRFKNYHELRNELTRMFGLEHDHKSGWQLVFIDNENDMLLLGDDPWDEFIGCV 733
Query: 683 KRLTILMGS 691
K + IL S
Sbjct: 734 KSIRILSSS 742
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 233/497 (46%), Gaps = 100/497 (20%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLI 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP P +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+Y ++ L P+ + E + + ++G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKETDEIYCQMTLQPLHS-----ETDVFPIPTLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 207 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 226
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R + S S ++ G ++ A
Sbjct: 227 ---------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG------VLAAAAH 271
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F + Y PR S F + + A + GMRF M FETE+SS+ G
Sbjct: 272 AASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSK-RRCTGA 330
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + DP+ WPNS WR LQV WDE + +RVS W +E NM + SP + R+
Sbjct: 331 IVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENM--VFSSPLNSKRQ 388
Query: 414 KLR---LPQQLDFPFDGQFTMPLFSGNPLGP-----------------------SSPLCC 447
L +P L ++P GNP+G SP+ C
Sbjct: 389 CLPSYGVP-GLQIGSVNMSSIPRAQGNPIGNLQHMPGMGSELALLLLNQSGQNIGSPIAC 447
Query: 448 LSDNTSAGIQGARHAQF 464
+ S+ IQ A+H+ F
Sbjct: 448 QQSSFSSIIQNAKHSYF 464
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 165/498 (33%), Positives = 234/498 (46%), Gaps = 102/498 (20%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+YA++ L P+ + E + + S+G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKETDEIYAQMTLQPVHS-----ETDVFPIPSLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS L VG +R K G
Sbjct: 207 LLTTGWS-----------------------LFVGAKRLKAGDS----------------- 226
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R + S S ++ G ++ A
Sbjct: 227 ---------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG------VLAAAAH 271
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F + Y PR S F + + A + GMRF M FETE+S + GT
Sbjct: 272 AASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESIK-RRCTGT 330
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + DP+ WPNS WR LQV WDE + +RVS W +E NM + SP + R+
Sbjct: 331 IVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM--VFPSPLNSKRQ 388
Query: 414 KL----------------RLPQQLDFPFDGQFTMP-------LF----SGNPLGPSSPLC 446
L +P+ PF MP L SG LG SP+
Sbjct: 389 CLPSYAVPGLQIGSVNMSSIPRAQGSPFGNLQQMPGSGSDLALLLLNQSGQNLG--SPIA 446
Query: 447 CLSDNTSAGIQGARHAQF 464
C + S+ IQ A+H+ F
Sbjct: 447 CQQSSFSSIIQNAKHSYF 464
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 231 bits (589), Expect = 1e-57, Method: Composition-based stats.
Identities = 112/143 (78%), Positives = 123/143 (86%), Gaps = 11/143 (7%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYR
Sbjct: 1 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 60
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GTPRRHLLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N G
Sbjct: 61 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSN-----GLT 115
Query: 231 SNNGSCVTGNPFGGFSCFLREEE 253
S+N NP+ GFS FLR++E
Sbjct: 116 SDN------NPYPGFSGFLRDDE 132
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 223/697 (31%), Positives = 308/697 (44%), Gaps = 124/697 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S++ PS + +P I C+V ++
Sbjct: 21 ELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQMPSFN-LPSKILCKVVNV 79
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A+ ETDEVYA+I L+P P +E+ D L + E SF KTLT SD +
Sbjct: 80 QRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLP------EPERCTVHSFCKTLTASDTS 133
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 134 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWS 193
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVA GD + +R NG G
Sbjct: 194 VFVSSKKLVA-----------GDAFIFLR------------------GENGELRVG---- 220
Query: 244 GFSCFLREEEN---KMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+R++ N + + +M+L ++ A A+G
Sbjct: 221 -VRRLMRQQTNMPSSVISSQSMHLG---------------------VLATASHAIATGTL 258
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E+ F GTI V V
Sbjct: 259 FSVFYKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGEEVPERR-FSGTI--VGVG 315
Query: 361 DPIS--WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRL 417
D IS W +S WR L+V WDEP + +RVSPW +E LV+ P S P ++ R
Sbjct: 316 DNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTP----SNSQPMQRNKR- 370
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQG-ARHAQFGISSSDFHVNNK 476
P P + + LG P S +SA G ++ + S +F K
Sbjct: 371 ------PRPSVLPSPTANLSALGMWKP----SVESSAFSYGESQRGRDPYPSPNFSTTAK 420
Query: 477 LQSGLFL--SSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQF 534
S F S + +PNS + S T+S + N++L + +
Sbjct: 421 ANSLSFCGNSQVTSVSPNSMYRPNQVESVTDSFAPV--------VNKDLGERRQGTGIGY 472
Query: 535 LLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSS 594
LFG I+ + + VV+ V G +D ++A SD Q EKS
Sbjct: 473 RLFG--IQLIDNFNAEGTSPVVT-VSGTVGNDRPVVSLEAESD-------QHSEPEKSCL 522
Query: 595 SEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---- 650
RS Q +S KV ++ VGR +DL+ YE+L R+L MF IE
Sbjct: 523 ------RSHQELQSRQIRSCTKVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIEGELS 576
Query: 651 RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
S V+Y D + + GD+P+ +F K++ I
Sbjct: 577 GSTKKWQVVYTDNEDDMMKVGDDPWHEFCSMVKKIFI 613
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 230/744 (30%), Positives = 313/744 (42%), Gaps = 145/744 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S+N PS + +P I C+V ++
Sbjct: 16 ELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN-LPSKILCKVVNV 74
Query: 65 KFLADSETDEVYAKIKLVP-IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
A+ ETDEVYA+I L+P +E+ D+ L +S SF KTLT SD +
Sbjct: 75 HLRAEPETDEVYAQITLLPEADQSEVTSPDDPLP------ESPRCTVHSFCKTLTASDTS 128
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 129 THGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWS 188
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVA GD + +R NG G
Sbjct: 189 VFVSSKKLVA-----------GDAFIFLR------------------GENGELRVG---- 215
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA----ASGK 299
M ++ NM + S + M L +A A A+G
Sbjct: 216 --------VRRLMRQHSNMPSSVISSHS---------------MHLGVLATASHAIATGT 252
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PR S EF V + A GMRFKM FE ++ F GTI V+
Sbjct: 253 LFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMRFEGDEVPERR-FSGTIVGVED 311
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLP 418
+ W +S WR L+V WDEP + RVSPW +E LVSN P S S K+ R P
Sbjct: 312 NKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSNPPTN--SQPSQRNKRSRPP 369
Query: 419 ----QQLDFPFDGQFTMPLFS----------GNPLGPSSPLCCLSDNTSAGIQGARHAQF 464
LD G + P+ S G + PS+ ++T+ G G F
Sbjct: 370 ILPSTMLDSSLQGVWKSPVESAPFSYRDHQHGRDVYPSTNF----NSTATGFLG-----F 420
Query: 465 GISSSDFHVNNK--LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQN 522
G + S +NK S +S + F+P + G T + L + NSN N
Sbjct: 421 GGNCS---ASNKSIYWSSRIENSTESFSPVAVKEFGEKRQGTANGCRLFGIQLHDNSNSN 477
Query: 523 LEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGST 582
E + +S DD + L + SD HS+ + S
Sbjct: 478 EESLPMVS----------------LSGRVGDDGLLPSL-DAESDQHSEPSNVNRSDFPSV 520
Query: 583 HEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRR 642
S +E RS Q ++S KV ++ VGR +DL+ YE+L R+
Sbjct: 521 ---------SCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRK 571
Query: 643 LAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
L MF I S V+Y D + GD+P+ +F +++ I +
Sbjct: 572 LEEMFDINGELCGSTKEWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVKKL-- 629
Query: 699 TWITGMRTPKNGLDASNKTGPLSI 722
+PK GL S + P +
Sbjct: 630 -------SPKIGLPISEEVKPCKM 646
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/143 (78%), Positives = 123/143 (86%), Gaps = 11/143 (7%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYR
Sbjct: 1 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 60
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GTPRRHLLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N G
Sbjct: 61 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSN-----GLT 115
Query: 231 SNNGSCVTGNPFGGFSCFLREEE 253
S+N NP+ GFS FLR++E
Sbjct: 116 SDN------NPYPGFSGFLRDDE 132
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/406 (34%), Positives = 206/406 (50%), Gaps = 66/406 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 60 QRCLNSELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQLI 119
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E+ + + S++P + F KTL
Sbjct: 120 CQLHNVTMHADVETDEVYAQMTLQPLSP-----EEQKEPFLPIELGAASKQPTNYFCKTL 174
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 175 TASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHL 234
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV+ K R GD + I WN NN +
Sbjct: 235 LTTGWSVFVSAK-----------RLVAGDSVIFI-----------------WNDNNQLLL 266
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
R+ N S S ++ G ++ A AA+
Sbjct: 267 G------------------IRHANRPQTIMPSSVLSSDSMHIG------LLAAAAHAAAT 302
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
F + Y PR+S EF + A VK+ GMRF+M FETE+SS + +MGT+++
Sbjct: 303 NSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESS-VRRYMGTVTA 361
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 362 ISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPM 407
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 216/704 (30%), Positives = 309/704 (43%), Gaps = 131/704 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFP+GH E S++ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVINI 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ ETDEVYA+I L+P E D + +S ++ + E SF KTLT SD +
Sbjct: 81 QRRAEPETDEVYAQITLLP----EAD-QSEPMSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+H W FRHI+RG PRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R G NE G
Sbjct: 196 FVSSKKLVA-----------GDAFIFLR-------GENEELRVG---------------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
+ R+ N S SS + M + +A AA +G
Sbjct: 222 -----------VRRHMRQQTNIPSSVISSHS-----------MHIGVLATAAHAITTGTI 259
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E++ F GTI VQ
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEEAPEKR-FSGTIVGVQEN 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE--LVSNMPVIHLSPFSPARKKLRLP 418
W +S WR L+V WDEP + +RVSPW +E + +N P HL P R K P
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPSAHL---PPQRNKRPRP 375
Query: 419 QQLDFP---------FDGQFTMPLFSGNPLGPSSPLCCLSDNTSA-GIQGARHAQFGISS 468
L P DG + P + NP S PL T+A G+ G + I S
Sbjct: 376 PGLLSPTTAPSTPVTADGVWKSP--ADNP--SSVPLFSPPAKTAAFGLGGNKSFGVSIGS 431
Query: 469 SDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSEN 528
+ + + + F S+L +P T ++ N+ L E EN
Sbjct: 432 AFWPTHADGAAESFASALNNESP---------TEKKQTNGNVCRLF-------GFELVEN 475
Query: 529 IKKHQFLLFGQPIRTEQQISHSCS-DDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRI 587
+ + + +S + + D V S S + ++ SGS ++
Sbjct: 476 MNVDECF-------SAASVSGAVAVDQPVPSNEFDSGQQSESLNINQANLPSGSGDHEKS 528
Query: 588 SIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
S+ RS Q ++S KV ++ VGR +DL+ YE+L+++L MF
Sbjct: 529 SL-----------RSPQKSQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMF 577
Query: 648 GIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
I+ + S V+Y D + GD+P+++F +++ I
Sbjct: 578 DIKGELLESTKKWQVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 206/407 (50%), Gaps = 70/407 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLI 57
V ++ +LWHACAG +V +P V+YFPQGH E S++ PS + +P I
Sbjct: 15 VNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFN-LPSKI 73
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
C+V ++ A+ ETDEVYA++ L+P P +EI D L + +S SF KT
Sbjct: 74 LCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLP------EPQSCTVHSFCKT 127
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + +PP Q +VAKD+HG W FRHI+RG PRRH
Sbjct: 128 LTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRGQPRRH 187
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L AGD+ +FLR ++G+L VG+RR + + N P S +S+
Sbjct: 188 LLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQL---NNVPPSVISSH---- 240
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A
Sbjct: 241 ------------------------SMHLG---------------------VLATASHAIT 255
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y P S EF V + A GMRFKM FE +++ F GTI
Sbjct: 256 TGTLFSVFYKPSPS--EFIVSVNKYLEARNHKVSVGMRFKMRFEGDEAPERR-FSGTIVG 312
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPV 402
V W +S WR L+V WDEP + +RVSPW +E LV+ P+
Sbjct: 313 VGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLVTETPL 359
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRT 670
KV ++ VGR +DL+ SSY+EL +L MF I + ++ V+Y D +
Sbjct: 520 KVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDI-KGELCGPTKKWQVVYTDDEDDMMMV 578
Query: 671 GDEPFSDFMKSAKRLTI 687
GD+P+ +F +++ I
Sbjct: 579 GDDPWHEFCSMVRKIFI 595
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/218 (53%), Positives = 151/218 (69%), Gaps = 15/218 (6%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV--NFPSSSRIP---PLIFCRVSSLKF 66
+W ACAGS VQIP +NS V+YFPQGH E S S + P S + PLI C++S++ F
Sbjct: 1 IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60
Query: 67 LADSETDEVYAKIKLVPIPANEIDFEDNNLS--------LNSVGSDSESEKPASFAKTLT 118
LAD TDEV+ ++ L+P+ + + + L +N V D + K +FAK LT
Sbjct: 61 LADPVTDEVFIRLLLLPLNNHSCNLPLSFLEPSRSEGGGVNDV--DDDENKILAFAKILT 118
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SDANNGGGFSVPR+CA++IFP L+Y A+PPVQT+ D+HG W FRHIYRGTPRRHLL
Sbjct: 119 PSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHLL 178
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FVN KKL+AGDS+VF+R G++ +G+RRA +
Sbjct: 179 TTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 157/428 (36%), Positives = 210/428 (49%), Gaps = 77/428 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGH--AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLA 68
+LWHACAG +V +P S V Y PQ H A G V + +PP + CRV ++ A
Sbjct: 27 ELWHACAGPIVALPRRGSKVVYLPQAHLAAAGCGGDV----AVALPPHVACRVVDVELCA 82
Query: 69 DSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS--------ESEKPASFAKTLTQS 120
D TDEVYA++ L+ A FE N + G D +S F KTLT S
Sbjct: 83 DPSTDEVYARLALM---AEGEVFERNMEGGRNEGEDDTEDGDGERKSRMLQMFCKTLTAS 139
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE F LDY P Q +VAKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 140 DTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 199
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS+FVN+KKLV+GD+++FLR DG+L +G+ ++ I NE ++SN+
Sbjct: 200 GWSSFVNKKKLVSGDAVLFLRGDDGELKLGV---RRAIQLKNESLFKAFSSNSS------ 250
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
MN L AVA + +
Sbjct: 251 --------------------KMN------------------------ALSAVANSLKHRS 266
Query: 301 -FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETED-SSRISWFMGTISSVQ 358
F + Y PR + EF V ++ + GMRFK+ + +ED + R S G I+ V
Sbjct: 267 VFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDVNERRS---GMITGVT 323
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DPI WP S WR L V W++ + R+SPW +E+V I S + + K+ +L
Sbjct: 324 EVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVSIAQSLPASSSKRTKLC 383
Query: 419 QQ--LDFP 424
Q LD P
Sbjct: 384 SQSNLDVP 391
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/434 (34%), Positives = 208/434 (47%), Gaps = 81/434 (18%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--------FPSSSRIPPL 56
+K+++ LW CAG +V +P + S V YFPQGH+E + S P+ +P
Sbjct: 9 KKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLPAH 68
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
+ C + ++ AD +TDEVYA++ L P+ ++ F +L + ++ SF KT
Sbjct: 69 LICHLHNITLHADPDTDEVYAQMTLQPVQNDKEPFLTPDLGIQP------KQQTLSFCKT 122
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFS+PR AE +FP LD+T PP Q +VAKD+H + W FRHIYRG PRRH
Sbjct: 123 LTASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRH 182
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L Q GD + IR + NN
Sbjct: 183 LLTTGWSVFVSAKRL-----------QAGDTVLFIR-----------------DENNHLL 214
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+ G R++ N + + + G ++ + R
Sbjct: 215 L------GIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNSR-------------- 254
Query: 297 SGKPFEVVYYPRASTPEFCVKASAV-KAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
F + Y PRAS EF V KA GMRF+M ETEDSS +MGTI+
Sbjct: 255 ----FTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSS-TRRYMGTIT 309
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA---- 411
+ D + WPNS WR L+V WDE Q KRVS W +E ++ +P+ P
Sbjct: 310 GIGDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIEPLT-------APYFPCTSSL 362
Query: 412 --RKKLRLPQQLDF 423
RK+ RL L F
Sbjct: 363 FLRKRTRLDGMLSF 376
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV ++ VGR++D++ L +YEEL R +A MF +E ++ +++ D G +
Sbjct: 829 KVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEGDVLL 888
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ + + IL S + R
Sbjct: 889 VGDDPWEEFVGCVRFIKILSPSEVQQLNR 917
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/143 (78%), Positives = 123/143 (86%), Gaps = 11/143 (7%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYR
Sbjct: 1 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 60
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GTPRRHLLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N G
Sbjct: 61 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSN-----GLX 115
Query: 231 SNNGSCVTGNPFGGFSCFLREEE 253
S+N NP+ GFS FLR++E
Sbjct: 116 SDN------NPYPGFSGFLRDDE 132
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 230 bits (587), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/143 (78%), Positives = 123/143 (86%), Gaps = 11/143 (7%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYR
Sbjct: 1 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 60
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GTPRRHLLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G G N G
Sbjct: 61 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGLGSN-----GLA 115
Query: 231 SNNGSCVTGNPFGGFSCFLREEE 253
S+N NP+ GFS FLR++E
Sbjct: 116 SDN------NPYPGFSGFLRDDE 132
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 207/419 (49%), Gaps = 63/419 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG +V +P + VFYFPQGH E S N + + PL I C+V ++
Sbjct: 23 ELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 82
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
+ A+ +TDEVYA++ L+P NE + + E+P SF KTLT SD
Sbjct: 83 ELKAEQDTDEVYAQLTLLPEKQNEHASTEGEKEEVPAAVPAVHERPRVHSFCKTLTASDT 142
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A+ P LD + +PP Q ++ +D+HG W+FRHI+RG P+RHLL +GW
Sbjct: 143 STHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQPKRHLLQSGW 202
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S FV+ K+LVA D+ +FLR ++G+L VG+ ++ + PSS +S++
Sbjct: 203 SVFVSNKRLVARDAFIFLRGENGELRVGV---RRAMRQQANIPSSVISSHS--------- 250
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
M+L + + NT G F
Sbjct: 251 -------------------MHLGVLATAWHAVNT---------------------GSMFT 270
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
V Y PR S EF V +M+ + GMRFKM FE E+++ F GTI + +DP
Sbjct: 271 VYYKPRTSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEAAEQR-FTGTIVGIGDSDP 329
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
W +S WR L+V WDE + RVSPW +E + + ++P R K P +
Sbjct: 330 SGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPA--VSPLSVNPLQAPRNKRSRPNAI 386
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 201/429 (46%), Gaps = 81/429 (18%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPL 56
++ E ++ +LWHACAG +V +P VFYFPQGH E S N + +PP
Sbjct: 48 RDAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPK 107
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA----- 111
I CRV ++ A+ +TDEV+A++ L+P P N N+V + P
Sbjct: 108 ILCRVINVMLKAEPDTDEVFAQVTLLPEP---------NQDENAVEKEGPPAAPPRFHVH 158
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SF KTLT SD + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG
Sbjct: 159 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRG 218
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLL +GWS FV+ K+LVAGD+ +
Sbjct: 219 QPRRHLLQSGWSVFVSSKRLVAGDAFI--------------------------------- 245
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
FLR E NG + + + GN + M L
Sbjct: 246 ----------------FLRGE------NGELRVGVRRAMRQQGNVPSSVISSH-SMHLGV 282
Query: 292 VALA----ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI 347
+A A +G F V Y PR S EF V +++ ++ GMRFKM FE E++
Sbjct: 283 LATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE- 341
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
F GTI ++ AD WP S WR L+V WDE + +RVS W +E P ++ P
Sbjct: 342 QRFTGTIVGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPPALNPLP 401
Query: 408 FSPARKKLR 416
P K+ R
Sbjct: 402 M-PRPKRPR 409
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 203/424 (47%), Gaps = 71/424 (16%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PL 56
+E E ++ +LWHACAG +V +P VFYFPQGH E S N S +P P
Sbjct: 38 REAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPK 97
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV ++ A+ +TDEV+A++ LVP P + ++N + + + SF KT
Sbjct: 98 ILCRVINVMLKAEPDTDEVFAQVTLVPEP----NQDENAVEKEAPPAPPPRFHVHSFCKT 153
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 154 LTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 213
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVA GD + +R NG
Sbjct: 214 LLQSGWSVFVSSKRLVA-----------GDAFIFLR------------------GENGEL 244
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA- 295
G M + GN+ + S + M L +A A
Sbjct: 245 RVGV------------RRAMRQQGNVPSSVISSHS---------------MHLGVLATAW 277
Query: 296 ---ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F G
Sbjct: 278 HAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE-QRFTG 336
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
TI ++ +D WP S WR L+V WDE + +RVSPW +E P ++ P P
Sbjct: 337 TIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPM-PRP 395
Query: 413 KKLR 416
K+ R
Sbjct: 396 KRPR 399
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/373 (35%), Positives = 183/373 (49%), Gaps = 54/373 (14%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D +W ACA + ++P + V+YFP GHAE + P+ P C V+ +
Sbjct: 18 VDRDVWLACAAPLSRLPTVGDDVYYFPDGHAEQC--PAHLPAPLPAPHFFPCTVTDISLG 75
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFA-KTLTQSDANNGG 126
AD +TDEV+AKI L P A + + S+S +P S++ K L+QSDAN GG
Sbjct: 76 ADDKTDEVFAKISLRPGLAAASRPDPGS-------SNSPPREPLSYSIKELSQSDANGGG 128
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
F VPRYC + ++P++D+ ADPP+Q +V D G+ W+FRH+YR RH+LTTGWS FV
Sbjct: 129 SFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLTTGWSKFV 188
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFS 246
N K LVAGD IVF+R +GDL VG+RR + G
Sbjct: 189 NAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAG--------------------------- 221
Query: 247 CFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYY 306
+ R G R RV P+ V+EA LAA G+PF V YY
Sbjct: 222 --------TLHRPGTGGDAQDPDQPPPPPPRNALARVPPKDVMEAARLAAEGRPFTVTYY 273
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAF-ETEDSSRISWFMGTISSVQVADPISW 365
PR + EF V + V+ + W G M F E ED+ R W G + ++
Sbjct: 274 PRKAAGEFVVPRNEVEGVLDTLWEPGSHVLMQFAEAEDTRRTMWADGHVKAIH------- 326
Query: 366 PNSPWRLLQVTWD 378
WR L++ WD
Sbjct: 327 -QKIWRALEIDWD 338
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 203/424 (47%), Gaps = 71/424 (16%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PL 56
+E E ++ +LWHACAG +V +P VFYFPQGH E S N S +P P
Sbjct: 38 REAEAALYRELWHACAGPLVTVPREGELVFYFPQGHIEQVEASTNQASEQHMPVYDLRPK 97
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV ++ A+ +TDEV+A++ LVP P + ++N + + + SF KT
Sbjct: 98 ILCRVINVMLKAEPDTDEVFAQVTLVPEP----NQDENAVEKEAPPAPPPRFHVHSFCKT 153
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 154 LTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRH 213
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVA GD + +R NG
Sbjct: 214 LLQSGWSVFVSSKRLVA-----------GDAFIFLR------------------GENGEL 244
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA- 295
G M + GN+ + S + M L +A A
Sbjct: 245 RVG------------VRRAMRQQGNVPSSVISSHS---------------MHLGVLATAW 277
Query: 296 ---ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F G
Sbjct: 278 HAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQR-FTG 336
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
TI ++ +D WP S WR L+V WDE + +RVSPW +E P ++ P P
Sbjct: 337 TIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPM-PRP 395
Query: 413 KKLR 416
K+ R
Sbjct: 396 KRPR 399
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 229 bits (584), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 149/434 (34%), Positives = 208/434 (47%), Gaps = 81/434 (18%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--------FPSSSRIPPL 56
+K+++ LW CAG +V +P + S V YFPQGH+E + S P+ +P
Sbjct: 9 KKAMNTALWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLPAH 68
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
+ C + ++ AD +TDEVYA++ L P+ ++ F +L + ++ SF KT
Sbjct: 69 LICHLHNITLHADPDTDEVYAQMTLQPVQNDKEPFLTPDLGIQP------KQQTLSFCKT 122
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFS+PR AE +FP LD+T PP Q +VAKD+H + W FRHIYRG PRRH
Sbjct: 123 LTASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRH 182
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS FV+ K+L Q GD + IR + NN
Sbjct: 183 LLTTGWSVFVSAKRL-----------QAGDTVLFIR-----------------DENNHLL 214
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+ G R++ N + + + G ++ + R
Sbjct: 215 L------GIRRANRQQANVPSSLLSSDSMLIGVLAAAAHAATTNSR-------------- 254
Query: 297 SGKPFEVVYYPRASTPEFCVKASAV-KAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
F + Y PRAS EF V KA GMRF+M ETEDSS +MGTI+
Sbjct: 255 ----FTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSS-TRRYMGTIT 309
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA---- 411
+ D + WPNS WR L+V WDE Q +RVS W +E ++ +P+ P
Sbjct: 310 GIGDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIEPLT-------APYFPCTSSL 362
Query: 412 --RKKLRLPQQLDF 423
RK+ RL L F
Sbjct: 363 FLRKRTRLDGMLSF 376
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV ++ VGR++D++ L +YEEL R +A MF +E ++ +++ D G +
Sbjct: 826 KVVYKTGSVGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFVDYEGDVLL 885
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ + + IL S + R
Sbjct: 886 VGDDPWEEFVGCVRFIKILSPSEVQQLNR 914
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/405 (35%), Positives = 201/405 (49%), Gaps = 76/405 (18%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFC 59
K+I+ +LWHACAG +V +P + S V+YFPQGH+E S ++S+IP + C
Sbjct: 40 KAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMC 99
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V ++ AD +TDE+YA++ L P+ + + F + L SE F KTLT
Sbjct: 100 QVHNVTLHADKDTDEIYAQMSLQPVNSEKDIFPIPDFGLKPSKHPSEF-----FCKTLTA 154
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE +FP LDY+ PP Q ++ +D+H + FRHIYRG P+RHLLT
Sbjct: 155 SDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQPKRHLLT 214
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ K+L AGD+++
Sbjct: 215 TGWSVFVSAKRLRAGDAVL----------------------------------------- 233
Query: 240 NPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F+R+E++++ R N S S S ++ G ++ A AA
Sbjct: 234 --------FIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHIG------VLAAAAHAAA 279
Query: 297 SGKPFEVVYYPR-----ASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
+ PF + Y PR A EF + A K+ GMRF M FETE+S + +
Sbjct: 280 NRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEESGK-RRY 338
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
MGTI + DP+SWP S WR LQV WDE RVS W +E
Sbjct: 339 MGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIE 383
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 550 SCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG 609
S S DV SQ+ S +D + D SG T + ++SS N S+Q
Sbjct: 738 STSQDVQSQITSVSLADSQAFSRPDFLDNSGGTSSSNVDFDESS---LLQNSSWQQVAPP 794
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-------HVLYQD 662
+ KV + VGR++D++ +YEEL + MFG+E +L+ ++Y D
Sbjct: 795 PMRTYTKV-QKMGSVGRSIDVASFKNYEELCSAIECMFGLE--GLLNDQKGSGWKLVYVD 851
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ GD+P+ +F+ + + IL
Sbjct: 852 YENDVLLVGDDPWKEFVGCVRCIRIL 877
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 219/712 (30%), Positives = 309/712 (43%), Gaps = 113/712 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V +P VFYFPQGH E S N S RIP I CRV ++
Sbjct: 15 ELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCRVIHIQ 74
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
A+ ETDEVYA+I L+P P D + E +P SF K LT SD +
Sbjct: 75 LRAEQETDEVYAQITLLPEP-------DQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTS 127
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A P+LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 128 THGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 187
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
TFV K+LVA GD V +R +NG
Sbjct: 188 TFVTSKRLVA-----------GDSFVFLR------------------GDNGE-------- 210
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
LR ++AR + S +S G VL + A + + +
Sbjct: 211 -----LRVGVRRLARQQSTMPTSV--ISSQSMHLG---------VLATASHAVATQTLFI 254
Query: 304 VYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VYY PR S +F + + A+ + GMRFKM FE EDS F GTI + P
Sbjct: 255 VYYKPRTS--QFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERR-FSGTIVGGEDFSP 311
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQL 421
W +S WR L+V WDEP + ++VSPW +E VS++P L+P + K +
Sbjct: 312 -EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQ-GLAPPGVLKNKRPRSNES 369
Query: 422 DFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARH-------AQFG---ISSSDF 471
P G L S L +S +T+ G + H A G I+S+
Sbjct: 370 PVPETGSAAASAVWHLGLTQSHDLTQMS-STAEGKRSENHVMWHHKQADIGGPLINSNTA 428
Query: 472 HVNNKLQSGLFLSS---------LQRFTPNSRDFDG--ILTSHTNSSENLSCLLTMGNSN 520
V+ G +LSS Q T +S+ L+ ++ + T+ + N
Sbjct: 429 CVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLHSSKLTSDTIIDPN 488
Query: 521 QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
N +K+ LFG + ++HS S V GK + GHS V + +D
Sbjct: 489 GNGKKAVAEMATSCRLFGFEL-----MNHSSSPPV-----GK--AHGHSISVSSGTDSDQ 536
Query: 581 STHEQRISIEKSSSSEFFWNRSFQVTESGLDT--GHCKVFLESEDVGRTLDLSVLSSYEE 638
+ + S E+ + Q ++ KV ++ VGR +DL+ L Y+E
Sbjct: 537 KSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVGRAVDLTALEGYDE 596
Query: 639 LYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L L MF I+ R +++ D G + GD+P+ +F +R+ I
Sbjct: 597 LIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFI 648
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 155/427 (36%), Positives = 207/427 (48%), Gaps = 76/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGH-AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLAD 69
+LWHACAG +V +P S V Y PQGH A G+V + +PP + CRV+ ++ AD
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGNV----AVDLPPHVACRVADVELCAD 79
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGS---------DSESEKPASFAKTLTQS 120
+ TDEVYA++ LV E + NL V + +S F KTLT S
Sbjct: 80 AATDEVYARLALVA----EGEAFGRNLRGGGVDGDDDMEDFDVERKSRMLHMFCKTLTAS 135
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTT 195
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS+FVN+KKLV+GD+++FLR DG+L +G+RRA I NE
Sbjct: 196 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRA---IQLKNE----------------A 236
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
F FSC + +A ++ S
Sbjct: 237 LFDDFSCDSTKRHTLLAVADSLKHKSV--------------------------------- 263
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETED-SSRISWFMGTISSVQV 359
F + Y PRA+ E+ + ++ + + G R + ED S R S G + V
Sbjct: 264 FHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERRS---GMVVHVSE 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL-P 418
DP+ WP S WR L V W++ RVSPW +E+ + S + + K+ +L P
Sbjct: 321 IDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIEIAGGSVSVAHSVSASSSKRTKLCP 380
Query: 419 Q-QLDFP 424
Q LD P
Sbjct: 381 QGNLDVP 387
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 202/402 (50%), Gaps = 69/402 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P + VFYFPQGH E S+N + S+ +P + CRV +++
Sbjct: 19 ELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVE 78
Query: 66 FLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA++ L+P P NE+ E + V + E P++ ++ + A
Sbjct: 79 LKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPGEGPSA-RRSPRLTPART 137
Query: 125 GGGFSVPRYCAETI----FPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
Y A T+ P D T PP Q +VAKD+H W+FRHI+RG PRRHLL +
Sbjct: 138 AASL----YSAATLMSASLPWYDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQS 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + + SN S V
Sbjct: 194 GWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQL------------SNVPSSVIS- 240
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+ +M+L + + NT+
Sbjct: 241 ------------------SQSMHLGVLATAWHAINTKSM--------------------- 261
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI +
Sbjct: 262 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR-FTGTIIGSENL 320
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 321 DPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 361
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRT 670
KV + +GR++DLS S+Y+EL L MF + S+ ++Y D G +
Sbjct: 692 TKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLV 751
Query: 671 GDEPFSDFMKSAKRLTI 687
GD+P+ +F +++ I
Sbjct: 752 GDDPWEEFCSIVRKIYI 768
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 228 bits (581), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 224/725 (30%), Positives = 315/725 (43%), Gaps = 128/725 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V +P VFYFPQGH E S N S RIP I CRV ++
Sbjct: 15 ELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCRVIHIQ 74
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
A+ ETDEVYA+I L+P P D + E +P SF K LT SD +
Sbjct: 75 LRAEQETDEVYAQITLLPEP-------DQAEPRSPDPCTPEPPRPTVHSFCKVLTASDTS 127
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A P+LD P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWS
Sbjct: 128 THGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWS 187
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
TFV K+LVA GD V +R +NG
Sbjct: 188 TFVTSKRLVA-----------GDSFVFLR------------------GDNGE-------- 210
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
LR ++AR + S +S G VL + A + + +
Sbjct: 211 -----LRVGVRRLARQQSTMPTSV--ISSQSMHLG---------VLATASHAVATQTLFI 254
Query: 304 VYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VYY PR S +F + + A+ + GMRFKM FE EDS F GTI + P
Sbjct: 255 VYYKPRTS--QFIIGLNKYLEAVSNGFAVGMRFKMRFEGEDSPERR-FSGTIVGGEDFSP 311
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQL 421
W +S WR L+V WDEP + ++VSPW +E VS++P L+P P K + P+
Sbjct: 312 -EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVPQ-GLAP--PGVLKNKRPRSN 367
Query: 422 DFPFDGQ------FTMPLFSGNP-------LGPSSPLCCLSDNTSAGIQGARH------- 461
+ P GQ F S L S L +S +T+ G + H
Sbjct: 368 ESPVPGQGKFLHRFCFETGSAAASAVWHLGLTQSHDLTQMS-STAEGKRSENHVMWHHKQ 426
Query: 462 AQFG---ISSSDFHVNNKLQSGLFLSS---------LQRFTPNSRDFDG--ILTSHTNSS 507
A G I+S+ V+ G +LSS Q T +S+ L+ ++
Sbjct: 427 ADIGGPLINSNTACVSRTQTEGSWLSSSHVSASQHQFQDATEDSKSVSAWPALSGYSTLH 486
Query: 508 ENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDG 567
+ T+ + N N +K+ LFG + ++HS S V GK + G
Sbjct: 487 SSKLTSDTIIDPNGNGKKAVAEMATSCRLFGFEL-----MNHSSSPPV-----GK--AHG 534
Query: 568 HSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDT--GHCKVFLESEDVG 625
HS V + +D + + S E+ + Q ++ KV ++ VG
Sbjct: 535 HSISVSSGTDSDQKSDLSKASKEQKQGQSHVSPKEIQSKQNCYSNTRSRTKVQMQGIAVG 594
Query: 626 RTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSA 682
R +DL+ L Y+EL L MF I+ R +++ D G + GD+P+ +F
Sbjct: 595 RAVDLTALEGYDELIDELEEMFEIKGELRPRYKWEIVFTDDEGDMMLVGDDPWPEFCNMV 654
Query: 683 KRLTI 687
+R+ I
Sbjct: 655 RRIFI 659
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 233/467 (49%), Gaps = 74/467 (15%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E + ++ +LWHACAG +V +P + S V + + N+PS +PP + C++
Sbjct: 15 EEPRCLNSELWHACAGPLVSLPAVGSRVAASTNKEVDSQIP--NYPS---LPPQLICQLH 69
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLTQSD 121
++ AD ETDEVYA++ L P+ A E +D L + +G+ S++P + F KTLT SD
Sbjct: 70 NVTMHADVETDEVYAQMTLQPLSAQEQ--KDPYLPAD-LGT--PSKQPTNYFCKTLTASD 124
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE +FP LD++ PP Q +VA+D+HG WKFRHI+RG P+RHLLTTG
Sbjct: 125 TSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLTTG 184
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WS FV+ K+LVA GD + I WN NN +
Sbjct: 185 WSVFVSAKRLVA-----------GDSVLFI-----------------WNENNQLLLG--- 213
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
R N S S ++ G ++ A AA+ F
Sbjct: 214 ---------------IRRANRPQTVMPSSVLSSDSMHIG------LLAAAAHAAATNSRF 252
Query: 302 EVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
+ Y PRAS EF + + VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 253 TIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISDL 311
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ S F P R K P
Sbjct: 312 DPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP-MYPSSF-PLRFKRPWPTG 369
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
L F G+ FS N SPL L D + +Q G++
Sbjct: 370 LPFFHGGRDDE--FSLN-----SPLMWLRDGGNPALQSLNFQGVGVT 409
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL L +FG+E D L +++ D +
Sbjct: 767 VKVY-KSGSFGRSLDITRFSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDVLL 825
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 826 VGDDPWQEFVNSVSCIKILSPEEVQQMGK 854
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 211/697 (30%), Positives = 290/697 (41%), Gaps = 106/697 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S N + ++P I CRV ++
Sbjct: 25 ELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQQMPLFSLPAKILCRVVHVQ 84
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A+ ETDEVYA+I L+P P + S + + SF KTLT SD +
Sbjct: 85 LRAEPETDEVYAQITLLPEPE-----QGEITSPDPPIPEPPRCTVHSFCKTLTASDTSTH 139
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A+ P+LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS F
Sbjct: 140 GGFSVLRRHADECLPQLDMSQHPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVF 199
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+L V G+ F
Sbjct: 200 VSSKRL---------------------------------------------VAGDAF--- 211
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
FLR E ++ R G L S S + + ++ A ++G F V Y
Sbjct: 212 -IFLRGENGEL-RVGVRRLMRQPSNMPSSVISSHSMHLG--VLATASHAISTGTLFSVFY 267
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
PR S EF + + A GMRFKM FE ED+ F GTI V A W
Sbjct: 268 KPRTSQSEFIISLNKYLEAKNHKLSVGMRFKMRFEGEDAPERR-FSGTIIGVGDAVSSRW 326
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP--------ARKKLRL 417
+S WR L+V WDEP + RVSPW +E P++ P +P AR L
Sbjct: 327 ADSEWRSLKVQWDEPSSIPRPVRVSPWELE-----PLVAAVPSAPQPTPRSKRARPPALL 381
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKL 477
P D P ++ + +G+ SS G+Q +S N
Sbjct: 382 PSTPDIPACSRWKSHIDAGSAFSHSS-----------GLQRGLDLYSSANSPTVFANMTK 430
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
L S T S + G L+ +N +E + M NS + + + LF
Sbjct: 431 IGSLPFSG----TNASCEISGNLSYWSNRAETPAKSF-MANSKRESGDRRPESGNGYRLF 485
Query: 538 GQPIRTEQQISHSCSDDVVSQVLGKSSS-DGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
G + ++ S VS +G+ S SD+ SD S S +
Sbjct: 486 GIQLVDNSTMAESSPAAAVSGGVGEDRSVPEDSDQQSQPSDIDRSDLPA-----VSGKPD 540
Query: 597 FFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS 656
+ S Q +S KV L+ VGR +DLS L YE+L +L MF IE LS
Sbjct: 541 KYCLMSPQEMQSRQTRSCTKVHLQGMAVGRAVDLSRLDCYEDLLNKLEQMFNIEGE--LS 598
Query: 657 ------HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
++Y D GD+P+ +F +++ I
Sbjct: 599 GPTKKWQLVYTDDEDDTMLVGDDPWHEFCGIVRKINI 635
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 216/447 (48%), Gaps = 79/447 (17%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRV 61
K+ + LWHACAG +V +P S + Y PQ H + G + P +PP + CRV
Sbjct: 14 KDAPAPVCRDLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAPVG--LPPHVACRV 71
Query: 62 SSLKFLADSETDEVYAKIKLVP--------IPANEIDFEDNNLSLNSVGSDSESEKPASF 113
++ AD TDEVYA++ LV + + ED+ + V + +S F
Sbjct: 72 VDVELCADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDD---MEDVDGERKSRMLHMF 128
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG P
Sbjct: 129 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQP 188
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
RRHLLTTGWS+FVN+KKLV+GD+++FLR DG+L +G+RRA I NE +NSN+
Sbjct: 189 RRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRA---IQLKNEALLKAFNSNS 245
Query: 234 GSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
T S + +L F+ N R
Sbjct: 246 SKIHT------LSAVVN------------SLKHRSVFHICYNPR---------------- 271
Query: 294 LAASGKPFEVVYYP--RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETED-SSRISWF 350
A+ F V Y+ ++ FC+ GMRFK+ + +ED + R S
Sbjct: 272 --AAASEFIVPYWKFLKSLNRPFCI---------------GMRFKIQYGSEDVNERRS-- 312
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
G I+ + DPI W S W+ L V W++ + R+SPW +E+V I S +
Sbjct: 313 -GMITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIEIVGGSVSIAQSLSAS 371
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGN 437
+ K+ +L Q G +P GN
Sbjct: 372 SSKRTKLCPQ------GNLDVPTLYGN 392
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 210/422 (49%), Gaps = 73/422 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+YA++ L P+ + E + + ++G+ ++S+ P+ F K
Sbjct: 92 LCQVHNITLHADKETDEIYAQMTLQPVHS-----ETDVFPIPTLGAYTKSKHPSEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 207 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 226
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R + S S ++ G ++ A
Sbjct: 227 ---------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG------VLAAAAH 271
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F V Y PR S F + + A + GMRF M FETE+SS+ GT
Sbjct: 272 AASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSK-RRCTGT 330
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +P+ WPNS WR LQV WDE + +RVS W +E NM + SP + R+
Sbjct: 331 IVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM--VFSSPLNSKRQ 388
Query: 414 KL 415
L
Sbjct: 389 CL 390
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/422 (34%), Positives = 210/422 (49%), Gaps = 73/422 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 33 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQL 92
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+YA++ L P+ + E + + ++G+ ++S+ P+ F K
Sbjct: 93 LCQVHNITLHADKETDEIYAQMTLQPVHS-----ETDVFPIPTLGAYTKSKHPSEYFCKN 147
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 148 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 207
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 208 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 227
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R + S S ++ G ++ A
Sbjct: 228 ---------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG------VLAAAAH 272
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F V Y PR S F + + A + GMRF M FETE+SS+ GT
Sbjct: 273 AASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSK-RRCTGT 331
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +P+ WPNS WR LQV WDE + +RVS W +E NM + SP + R+
Sbjct: 332 IVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM--VFSSPLNSKRQ 389
Query: 414 KL 415
L
Sbjct: 390 CL 391
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/399 (35%), Positives = 193/399 (48%), Gaps = 81/399 (20%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +P + S V+YF QGH+E + P+ +P + C+V
Sbjct: 45 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 104
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQS 120
++ AD ++DE+YA++ L P+ + E + + G + S+ PA F KTLT S
Sbjct: 105 HNVTLHADKDSDEIYAQMSLQPVHS-----ERDVFPVPDFGLLNRSKHPAEFFCKTLTAS 159
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE +FP LDYTA PP Q +V +D+H W FRHIYRG P+RHLLTT
Sbjct: 160 DTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTT 219
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV K+L AGDS++
Sbjct: 220 GWSLFVGSKRLRAGDSVL------------------------------------------ 237
Query: 241 PFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
F+R+E++++ R N + S S ++ G ++ A A+
Sbjct: 238 -------FIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIG------VLAAAAHATAN 284
Query: 298 GKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PRA EF + A KA GMRF M FETEDS + S
Sbjct: 285 RTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKRS-------- 336
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP+ W S WR LQV WDEP RVSPW +E
Sbjct: 337 --DMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 373
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/384 (38%), Positives = 192/384 (50%), Gaps = 74/384 (19%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSS----SRIPPLIFCRVSS 63
+DP++W CAG+ V+IP LNS V+YFP GH EH S N PS+ R I C VS+
Sbjct: 9 VDPKIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPN-PSTLSLLDRSRQFIPCTVST 67
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ LAD TDEV+ K+ L P N + + + + K S KTLT SDAN
Sbjct: 68 VNLLADPVTDEVFVKLLLTPGTNNCVHEPPPEVREDQ----HDGVKVVSSGKTLTPSDAN 123
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
NGG FSVP CA+ IFP LD A+ P Q + D+HG+ WK RH+YRGTP RHL+TT WS
Sbjct: 124 NGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLITTNWS 183
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV++KKL+ GDS+VF+ KK G E S G + FG
Sbjct: 184 EFVDEKKLIGGDSLVFM--------------KKSTRTGTETISVG--------IHRQKFG 221
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+ ++ + V EAV LA F+V
Sbjct: 222 AAT-----------------------------------KIAEKSVTEAVELAEKNMAFDV 246
Query: 304 VYYPRAST-PEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS-RISWFMGTISSVQVAD 361
VYYP A +F V A V+ AM+ W G+R K + + ++SS R S F GTIS+
Sbjct: 247 VYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNSSKRCSNFEGTISA----- 301
Query: 362 PISWPNSPWRLLQVTWDEPDLLQN 385
+S PN PWR+L+V + L N
Sbjct: 302 -LSAPNRPWRMLEVRTAKDSALHN 324
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 207/422 (49%), Gaps = 71/422 (16%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD +TDEVYA++ L P+ + E + + ++G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKDTDEVYAQMTLQPV-----NSETDVFPIPTLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS L VG +R K G
Sbjct: 207 LLTTGWS-----------------------LFVGAKRLKAGDS----------------- 226
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R S S ++ G ++ A
Sbjct: 227 ---------VLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIG------VLAAAAH 271
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F + Y PR S F + + A + GMRF M FETE+SS+ + GT
Sbjct: 272 AASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSK-RRYTGT 330
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+ + DP+ WPNS WR LQV WDE + +RVS W +E N V S + R+
Sbjct: 331 VVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPSSTLNSKRQ 390
Query: 414 KL 415
L
Sbjct: 391 CL 392
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 144/422 (34%), Positives = 198/422 (46%), Gaps = 72/422 (17%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPL 56
K+ E ++ +LWHACAG +V +P VFYFPQGH E S N + +PP
Sbjct: 30 KDAEAALFRELWHACAGPLVTVPREKERVFYFPQGHIEQVEASTNQVADQHMPVYDLPPK 89
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV +++ A+ +TDEV+A++ L+P P + +N + SF KT
Sbjct: 90 ILCRVINVQLKAEPDTDEVFAQVTLLPEPNQD----ENAVEKEPPPPPPPRFHVHSFCKT 145
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+H W+F+HI+RG PRRH
Sbjct: 146 LTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRH 205
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +
Sbjct: 206 LLQSGWSVFVSSKRLVAGDAFI-------------------------------------- 227
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA- 295
FLR E NG + + + GN + M L +A A
Sbjct: 228 -----------FLRGE------NGELRVGVRRAMRQQGNVPSSVISSH-SMHLGVLATAW 269
Query: 296 ---ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
+G F V Y PR S EF V +++ + GMRFKM FE E++ F G
Sbjct: 270 HAILTGTIFTVYYKPRTSPAEFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPE-QRFTG 328
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
T+ ++ +DP W +S WR L+V WDE +RVSPW +E P L+P S R
Sbjct: 329 TVVGIEDSDPKRWRDSKWRCLKVRWDETSNTPRPERVSPWKIEPALAPPA--LNPLSMPR 386
Query: 413 KK 414
K
Sbjct: 387 PK 388
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 210/421 (49%), Gaps = 67/421 (15%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 37 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQL 96
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD +TDEVYA++ L P+ + E + + S+GS ++S+ PA F K
Sbjct: 97 LCQVHNITMHADKDTDEVYAQMTLQPV-----NSETDVFPIQSLGSYAKSKHPAEYFCKN 151
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 152 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 211
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 212 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 231
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F+R+E++++ N + +SS + + + ++ A A+
Sbjct: 232 ---------VLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDS---MHIGVLAAAAHAAS 279
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
SG F + Y PR S F V + A+ + GMR M ETE+S + GTI
Sbjct: 280 SGSSFTIYYNPRTSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGK-RRHTGTIVG 338
Query: 357 VQVADPISWPNSPWRLLQVTWDEPD--LLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
V +DP+ WPNS WR LQV WDE + + +RVS W +E N V+ + + R+
Sbjct: 339 VSDSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIETPENTIVLPSASLNSKRQC 398
Query: 415 L 415
L
Sbjct: 399 L 399
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 226 bits (575), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 206/409 (50%), Gaps = 72/409 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPTLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F KTL
Sbjct: 77 CQLHNVTMHADLETDEVYAQMVLQPLTQ-----EEQKDTFVPIELGVPSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q ++AKD+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIAKDLHDNEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS VF+ A+ V
Sbjct: 192 LTTGWS--------------VFVSAK-------------------------------RLV 206
Query: 238 TGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
TG+ F+R E N++ R+ S S ++ G ++ A
Sbjct: 207 TGDSV----IFIRNERNQLLLGIRHATRPQTIVPSSMLSSDSMHIG------LLAAAAHA 256
Query: 295 AASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
AA+ F V Y+PR+S+ EF + +KA GMRF+M FETE+SS + +MGT
Sbjct: 257 AATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGT 315
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
I+ + D + WPNS WR ++V WDE + R S W +E ++ P+
Sbjct: 316 ITGIGDLDSVLWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFPM 364
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 225 bits (573), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 222/450 (49%), Gaps = 66/450 (14%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLG-SVNFPSSS------RIPPL 56
V+ + +LW ACAGS V +P ++ VFYFPQGH E + N P S +P
Sbjct: 407 VQDILYTELWRACAGSFVYVPRVDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVYDLPSK 466
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVP-IPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
I C++ +++ A++ +DEVYA++ LVP + + + FE+ ++++ + S + + SF+K
Sbjct: 467 ILCKIMNVELKAEAYSDEVYAQVTLVPEVQKDNLCFEEE-VNIDQIPSRNAA---YSFSK 522
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
LT SD + GGFSVP+ A+ FP LD T P Q +VAKD++G W+FRHIYRG P+R
Sbjct: 523 ILTPSDTSTHGGFSVPKKYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKR 582
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLLT+GWS FVN KKLVAGDS +F+R + G+L VGIRRA + + S + S
Sbjct: 583 HLLTSGWSLFVNAKKLVAGDSCIFVRGESGELRVGIRRAAENLSN---------ISQSSS 633
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
++G+ +M L G ++ N GN
Sbjct: 634 LISGH--------------------SMQL---GILTNASNAVGNRTM------------- 657
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
F V Y P + EF V + + G R +M E E+S R GTI
Sbjct: 658 -----FLVYYRPWTNPFEFIVHLQTYLKSTLQDYPIGTRVQMQHEVEESLR--RLAGTII 710
Query: 356 SVQVADPISWPNSPWRLLQVTWDE-PDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
+ D I WP S WR L+V WD + + +RV PW +E + + P P +KK
Sbjct: 711 GNEDIDSIRWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIEPLESAKEKKQVPALPTKKK 770
Query: 415 LR-LPQQLDFPFDGQFTMPLFSGNPLGPSS 443
L Q P F N GPSS
Sbjct: 771 GHALLNQRSLPGISGFGKNDVHQNSAGPSS 800
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 143/368 (38%), Positives = 186/368 (50%), Gaps = 69/368 (18%)
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK------- 109
IFCRV +K AD E D+VYA++ L+P + E N + ++ D ES
Sbjct: 2 IFCRVLDVKLHADQENDDVYAQVTLLP------ELESNEVCGKNLEEDEESGSEILCKTI 55
Query: 110 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIY 169
P F KTLT SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIY
Sbjct: 56 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIY 115
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGW 229
RG PRRHLLTTGWS FVNQK LV+GD+++FLR +DG+L + GI + PSS
Sbjct: 116 RGQPRRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGEL-------RLGIRRASRPPSS-- 166
Query: 230 NSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVL 289
P+ S + ++L+ +L
Sbjct: 167 ----------IPYSVLS------------SQGLHLS----------------------IL 182
Query: 290 EAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRIS 348
A A S K F V Y PRAS EF + ++ GMRFKM E EDS+
Sbjct: 183 SPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMEDSAEKR 242
Query: 349 WFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF 408
G I+ DP+ WPNS WR L V WD+ L+ +RVSPW +E ++P + P
Sbjct: 243 -CTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALSC-PV 300
Query: 409 SPARKKLR 416
+P K+L+
Sbjct: 301 APRIKRLQ 308
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 116/227 (51%), Positives = 148/227 (65%), Gaps = 35/227 (15%)
Query: 13 WHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------------PLIFCR 60
W ACAGS VQIP +NS V+YFPQGH E S SSS P P I C+
Sbjct: 1 WRACAGSSVQIPAVNSRVYYFPQGHFEQS-------SSSTAPHPPFLTNLALSKPSIPCQ 53
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSV-----------GSDSESEK 109
+S++ FLAD TDEV+ ++ L+P+ D +NL L+ + D + K
Sbjct: 54 ISAVDFLADPVTDEVFTRLLLIPL-----DNPFSNLPLSFLEPCRSEGEGANDVDDDERK 108
Query: 110 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIY 169
+F+K LT SDANNGGGFSVPR+CA++IFP L+Y A+PPVQT+ D+HG W FRHIY
Sbjct: 109 ILAFSKILTPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIY 168
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RGTPRRHLLTTGWS FVN KKL+AGDS+VF+R G++ +G+RRA +
Sbjct: 169 RGTPRRHLLTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215
>gi|298113106|gb|ADB96384.2| auxin response factor 16 [Arabidopsis thaliana]
Length = 274
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/298 (46%), Positives = 177/298 (59%), Gaps = 31/298 (10%)
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
SWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+
Sbjct: 1 SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTS 60
Query: 408 FSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQ 463
FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR H
Sbjct: 61 FSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQY 120
Query: 464 FGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ 521
+G+SSSD H N+ S + R+ D +E C LTMG +
Sbjct: 121 YGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTPC 173
Query: 522 NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGS 581
N KS KK +LFG+ I E+Q+S S D + ++ + SG
Sbjct: 174 NDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSGG 216
Query: 582 THEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSSYEE 638
+++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL SYEE
Sbjct: 217 SNQNGVAGRELSSSDEGSPCSRKVHDASGLETGHCKVFMESDDVGRTLDLSVLGSYEE 274
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 148/412 (35%), Positives = 200/412 (48%), Gaps = 89/412 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +PP+ S V YFPQGH E S + P+ +P + C + ++
Sbjct: 77 ELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLDNV 136
Query: 65 KF---------------LADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESE 108
AD ETDEVYA++ L+P+P ANE + +L S S
Sbjct: 137 TLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPANEKE------ALMSPDIGIRSR 190
Query: 109 KPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
+P F KTLT SD + GGFS+PR AE +FP LDY+ PP Q + A+D+H + W FRH
Sbjct: 191 QPTDYFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEWHFRH 250
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS 227
IYRG PRRHLLTTGWS FV+ K R Q GD +
Sbjct: 251 IYRGQPRRHLLTTGWSVFVSAK-----------RLQAGDAVL------------------ 281
Query: 228 GWNSNNGSCVTGNPFGGFSCFLREEENKMA---RNGNMNLNSYGSFNSSGNTRGNGGRVK 284
F+R+++ ++ R N S S ++ G
Sbjct: 282 --------------------FIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHIG---- 317
Query: 285 PEMVLEAVALAASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETED 343
++ A AA+ F + Y PR S EF + A KA + GMRF+M FETE+
Sbjct: 318 --VLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMRFRMVFETEE 375
Query: 344 SSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
SS + +MGTI+ + DPI WPNS WR L+V WDE + +RVS W +E
Sbjct: 376 SS-VRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIE 426
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 209/422 (49%), Gaps = 73/422 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 33 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQL 92
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+YA++ L P+ + E + + ++G+ ++S+ + F K
Sbjct: 93 LCQVHNITLHADKETDEIYAQMTLQPVHS-----ETDVFPIPTLGAYTKSKHSSEYFCKN 147
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 148 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 207
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 208 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 227
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R + S S ++ G ++ A
Sbjct: 228 ---------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG------VLAAAAH 272
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F V Y PR S F + + A + GMRF M FETE+SS+ GT
Sbjct: 273 AASSGGSFTVYYNPRTSPSPFVIPLARYNTATYLQPSVGMRFAMMFETEESSK-RRCTGT 331
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +P+ WPNS WR LQV WDE + +RVS W +E NM + SP + R+
Sbjct: 332 IVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM--VFSSPLNSKRQ 389
Query: 414 KL 415
L
Sbjct: 390 CL 391
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 224/741 (30%), Positives = 313/741 (42%), Gaps = 145/741 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S+N PS + +P I C+V ++
Sbjct: 16 ELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN-LPSKILCKVVNV 74
Query: 65 KFLADSETDEVYAKIKLVP-IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
A+ ETDEVYA+I L+P +E+ D+ L +S SF KTLT SD +
Sbjct: 75 HLRAEPETDEVYAQITLLPEADQSEVTSPDDPLP------ESPRCTVHSFCKTLTASDTS 128
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD T PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 129 THGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWS 188
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVA GD + +R NG G
Sbjct: 189 VFVSSKKLVA-----------GDAFIFLR------------------GENGELRVG---- 215
Query: 244 GFSCFLREEEN---KMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+R++ N + + +M+L ++ A A+G
Sbjct: 216 -VRRLMRQQSNMPSSVISSHSMHLG---------------------VLATASHAIATGTL 253
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE ++ F GTI V
Sbjct: 254 FSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERR-FSGTIVGVGDN 312
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR---L 417
W +S WR L+V WDEP + RVSPW +E + + P + P S K+ R L
Sbjct: 313 KSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPTNPQP-SQRNKRSRPPIL 371
Query: 418 PQQL-DFPFDGQFTMPLFS----------GNPLGPSSPLCCLSDNTSAGIQGARHAQFGI 466
P + D G + P+ S G + PS+ ++T+ G G FG
Sbjct: 372 PSTMPDSSLQGVWKSPVESAPFSYCDHQHGRDVYPSTNF----NSTATGFLG-----FG- 421
Query: 467 SSSDFHVNNK--LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLE 524
+ + +NK S +S + F+P + G T + L + NSN N E
Sbjct: 422 --GNCYASNKSIYWSSRMENSTESFSPVALKEFGEKRQGTANGCRLFRIQLHDNSNSNEE 479
Query: 525 KSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG-SGSTH 583
P+ T + G+ DG + A SD S ++
Sbjct: 480 -------------SLPMVT---------------LSGRMGDDGPLPSLDAESDQHSEPSN 511
Query: 584 EQRISIEK-SSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRR 642
R I S +E RS Q ++S KV ++ VGR +DL+ YE+L R+
Sbjct: 512 VNRSDIPSVSCDAEKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRK 571
Query: 643 LAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
L MF I S V+Y D + GD+P+ +F +++ I +
Sbjct: 572 LEEMFDITGELCGSTKKWQVVYTDNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVRKL-- 629
Query: 699 TWITGMRTPKNGLDASNKTGP 719
+PK GL S + P
Sbjct: 630 -------SPKIGLPISEEVKP 643
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 146/218 (66%), Gaps = 11/218 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFC 59
+K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ N P +P + C
Sbjct: 18 KKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLT 118
++ SL ADSETDEVYA++ L P+ + D + L S ++++PA F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYAQMTLQPV-----NKYDRDAMLASELGLKQNKQPAEFFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD+T PP Q ++AKD+H WKFRHIYRG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + A+ GMRF+M FETEDS + +MGTI+ +
Sbjct: 262 PFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSG-VRRYMGTITGIGD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQV WDE + RVS W +E V+ I PF + +LP+
Sbjct: 321 LDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFF----RPKLPK 376
Query: 420 QLDFPFD 426
Q P D
Sbjct: 377 QPGMPDD 383
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERS-----DMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ Y+EL LA MFGI+ M ++Y D I GD+P+ +F
Sbjct: 951 VGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEF 1010
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1011 VGCVKSIKIL 1020
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 202/420 (48%), Gaps = 66/420 (15%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIF 58
E + +LW+ CAG +V +P + V+YFPQGH E S N + +P I
Sbjct: 35 TEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKIL 94
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES---EKPASFAK 115
C V +++ A+ + DEVYA++ L+P E E+N S S + + SF K
Sbjct: 95 CEVMNVELKAEPDNDEVYAQLTLLP----ESKPEENGSSEEMPASPPAALARPRVHSFCK 150
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRR
Sbjct: 151 TLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRR 210
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLL +GWS FV+ K+LVAGD+ +FLR G+L VG+ ++ + PSS +S++
Sbjct: 211 HLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGV---RRAMRQQANVPSSVISSHS-- 265
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
M+L + + NT
Sbjct: 266 --------------------------MHLGVLATAWHAVNT------------------- 280
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 281 --GTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQR-FTGTIV 337
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKK 414
D W S WR L+V WDE + +RVSPW +E VS P+ L P R +
Sbjct: 338 GNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 397
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 202/420 (48%), Gaps = 66/420 (15%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIF 58
E + +LW+ CAG +V +P + V+YFPQGH E S N + +P I
Sbjct: 68 TEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKIL 127
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES---EKPASFAK 115
C V +++ A+ + DEVYA++ L+P E E+N S S + + SF K
Sbjct: 128 CEVMNVELKAEPDNDEVYAQLTLLP----ESKPEENGSSEEMPASPPAALARPRVHSFCK 183
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRR
Sbjct: 184 TLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRR 243
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGS 235
HLL +GWS FV+ K+LVAGD+ +FLR G+L VG+ ++ + PSS +S++
Sbjct: 244 HLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGV---RRAMRQQANVPSSVISSHS-- 298
Query: 236 CVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA 295
M+L + + NT
Sbjct: 299 --------------------------MHLGVLATAWHAVNT------------------- 313
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 314 --GTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQR-FTGTIV 370
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKK 414
D W S WR L+V WDE + +RVSPW +E VS P+ L P R +
Sbjct: 371 GNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 430
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/427 (35%), Positives = 210/427 (49%), Gaps = 76/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG +V +P S V Y PQGH + G ++ +PP + CRV+ ++ AD+
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGD---VAADLPPHVVCRVADVELCADA 80
Query: 71 ETDEVYAKIKLVPIPANEIDFEDN--------NLSLNSVGSDSESEKPASFAKTLTQSDA 122
TDEV A++ LV A F N + + ++ +S F KTLT SD
Sbjct: 81 ATDEVCARLALV---AEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S+FVN+KKLV+GD+++FLR DG+L +G+RRA +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQ-------------------------- 231
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP-F 301
L+ E + FNS R + L AVA + + F
Sbjct: 232 ------LKNEA------------LFEDFNSDSTKRHS---------LTAVADSLKNRSVF 264
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSVQV 359
+ Y PRA+ E+ + + ++ H +C G R ED S R S + IS +
Sbjct: 265 HISYNPRATASEYIIPYAKFLKSLN-HPVCIGARINFQCHNEDVSERRSGVVVRISEI-- 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WP S WR L V W++ RVSPW +E+ + S + + K+ +L
Sbjct: 322 -DPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSHSLSASSSKRTKLCP 380
Query: 420 Q--LDFP 424
Q LD P
Sbjct: 381 QGNLDVP 387
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 209/427 (48%), Gaps = 76/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG +V +P S V Y PQGH + G ++ +PP + CRV+ ++ AD+
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGD---VAADLPPHVVCRVADVELCADA 80
Query: 71 ETDEVYAKIKLVPIPANEIDFEDN--------NLSLNSVGSDSESEKPASFAKTLTQSDA 122
TDEV A++ LV A F N + + ++ +S F KTLT SD
Sbjct: 81 ATDEVCARLALV---AEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S+FVN+KKLV+GD+++FLR DG+L +G+RRA +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQ-------------------------- 231
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP-F 301
L+ E + FNS R + L AVA + + F
Sbjct: 232 ------LKNEA------------LFEDFNSDSTKRHS---------LTAVADSLKNRSVF 264
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSVQV 359
+ Y PRA+ E+ + + ++ H +C G R ED S R S G + +
Sbjct: 265 HISYNPRATASEYIIPYAKFLKSLN-HPVCIGARINFQCHNEDVSERRS---GVVVRISE 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WP S WR L V W++ RVSPW +E+ + S + + K+ +L
Sbjct: 321 IDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSHSLSASSSKRTKLCP 380
Query: 420 Q--LDFP 424
Q LD P
Sbjct: 381 QGNLDVP 387
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 130/303 (42%), Positives = 168/303 (55%), Gaps = 36/303 (11%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP----SSSRIPPLIFCRVSSLKF 66
+LWH CAG + +P + V YFPQGH E + S FP S+ +PP IFCRV +++
Sbjct: 55 ELWHVCAGRLTSLPKKGNVVVYFPQGHLEQAASSSPFPPMDISTFDLPPQIFCRVVNVQL 114
Query: 67 LADSETDEVYAKIKLVPIPA-NEIDFEDNNLSLNSVGSDSE-------SEKPASFAKTLT 118
LA+ E DEVY ++ L+P P I+ E L +G D E P F KTLT
Sbjct: 115 LANKENDEVYTQVTLLPQPELAGINLEGKELE--GLGVDEEGGGGSPTKSTPHMFCKTLT 172
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLL
Sbjct: 173 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 232
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG--------IGGGNEYPSSGWN 230
TTGWS FV+QK LV+GD+++FLR + G+L +GIRRA + IG N YP+
Sbjct: 233 TTGWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLSL 292
Query: 231 SNNGSCVTGNPFGGFSCFLREEENKMARNGNM-------------NLNSYGSFNSSGNTR 277
+ N + T + F G F ++ M ++GN NL + F SSG
Sbjct: 293 AAN-AVATKSMFHGLKVFNKQTHLNMLQDGNQVNKFFLKMLPEIHNLQNVEVFLSSGVVT 351
Query: 278 GNG 280
G G
Sbjct: 352 GIG 354
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 335 FKMAFETEDSSRISWFM--GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPW 392
KM E + + F+ G ++ + DP WPNS WR L V WD+ + +RVSPW
Sbjct: 329 LKMLPEIHNLQNVEVFLSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPW 388
Query: 393 LVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
++ ++P + + SP KKLR Q P
Sbjct: 389 EIDPSVSLPPLSIQS-SPRLKKLRTSLQATPP 419
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 195/383 (50%), Gaps = 65/383 (16%)
Query: 20 MVQIPPLNSTVFYFPQGHAEHSLGSVN-FPSSSRIP-----PLIFCRVSSLKFLADSETD 73
+V +P V+YFPQGH E S N ++P P I CRV +++ A+ +TD
Sbjct: 5 LVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDTD 64
Query: 74 EVYAKIKLVPIPANEIDF-EDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPR 132
EV+A++ L+P +++ E+ +L + SF K LT SD + GGFSV +
Sbjct: 65 EVFAQVILLPETQQDVELVEEEDLPPLPA-----RPRVHSFCKMLTASDTSTHGGFSVLK 119
Query: 133 YCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLV 192
A+ P LD + PPVQ +VAKD+HG W+FRHI+RG PRRHLL +GWS FV+ KKLV
Sbjct: 120 RHADECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFVSAKKLV 179
Query: 193 AGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREE 252
AGD+ +FLR + +L VG+R + + ++ PSS +S++
Sbjct: 180 AGDAFIFLRGETEELRVGVR---RALRQPSKIPSSLISSHS------------------- 217
Query: 253 ENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTP 312
M++ ++ A ++G F V Y PR S
Sbjct: 218 ---------MHIG---------------------ILATAWHAVSTGSMFTVYYKPRTSPA 247
Query: 313 EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRL 372
EF + ++++++ GMRFKM FE +D+ F GT+ V+ ADP WP S WR
Sbjct: 248 EFIIPVDKYMESVKINYAIGMRFKMRFEADDAPE-QRFSGTVIGVEEADPKKWPRSNWRC 306
Query: 373 LQVTWDEPDLLQNVKRVSPWLVE 395
L+V WDE + RVSPW VE
Sbjct: 307 LKVHWDETSPVHRPDRVSPWKVE 329
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/215 (52%), Positives = 144/215 (66%), Gaps = 11/215 (5%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS------RIPPLIFCRV 61
+D + WHACAG +V +P + V YFPQGH E L S N ++ +P IFCRV
Sbjct: 72 LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
+L A ETDEVYA++ LVP E + D +L L+ + S++ K + F+K LT SD
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVP----ENEQLDQSLELDEPTASSKA-KLSMFSKNLTSSD 186
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE FPRLDY PP Q ++AKD+HG WKFRHIYRG PRRHLLTTG
Sbjct: 187 TSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLLTTG 246
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS FV+QKKLVAGD+++F+R +G+L +GIRRA +
Sbjct: 247 WSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVR 281
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS- 345
VL A A A S K F V Y PRAS EF V + +++ L GMRFKM FETEDSS
Sbjct: 301 VLAAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSE 360
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
R +MGTI+ + DP WP S WR L+V WDE + +RVSPW +E
Sbjct: 361 RSVRYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIE 410
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKS 681
VGR LDLS Y +L L +FGI+ S S +Y D G + GD+P+ +F +
Sbjct: 669 VGRALDLSKFRGYTQLLEELQHLFGIDESLNGSEWQAVYVDNEGDMLLVGDDPWEEFCST 728
Query: 682 AKRLTIL 688
+ + IL
Sbjct: 729 VRCIRIL 735
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 208/708 (29%), Positives = 301/708 (42%), Gaps = 135/708 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S+N PS + +P I C+V ++
Sbjct: 23 ELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN-LPSKILCKVVNI 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA----SFAKTLTQS 120
A+ ETDEVYA+I L+P + + S + D E P SF KTLT S
Sbjct: 82 HLRAEPETDEVYAQITLLP---------ETDQSEVTSPDDPLPEPPRCTVHSFCKTLTAS 132
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R A+ P LD T PP Q +VA D+HG W FRHI+RG PRRHLLTT
Sbjct: 133 DTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTT 192
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ KKLVA GD + +R NG G
Sbjct: 193 GWSVFVSSKKLVA-----------GDAFIFLR------------------GENGELRVG- 222
Query: 241 PFGGFSCFLREEEN---KMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
+R++ N + + +M+L ++ A ++
Sbjct: 223 ----VRRLMRQQSNMPSSVISSHSMHLG---------------------VLATASHAIST 257
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
G F V Y PR S EF V + A GMRFKM FE ++ F GTI V
Sbjct: 258 GTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKMRFEGDEVPERR-FSGTIVGV 316
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
+ W +S WR L+V WDEP + RVSPW +E + + P + P R K
Sbjct: 317 EDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVSTPPANSQPTQ--RNKRSR 374
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKL 477
P P+ PS+ ++D++ GI + S F +
Sbjct: 375 P-------------------PILPST----MTDSSLQGIWKS-----PADSPPFPYRDP- 405
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ-----NLEKSENIKK- 531
Q G L RF+ + F G + S++++ + NS + LE+S ++
Sbjct: 406 QHGRDLYPSPRFSSTATSFLGFGGNSPASNKSMYWSSRLENSTEPFSPVALEESGEKRQG 465
Query: 532 --HQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISI 589
+ LFG + S +S +G D+ S D H + ++
Sbjct: 466 TGNGCRLFGIQLLENSNAEESLQTAPLSGRVG-------DDRSVPSLDVESDQHSEPSNV 518
Query: 590 EKSSSSEFFWN------RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRL 643
+S + RS Q ++S KV ++ VGR +DL+ YE+L R+L
Sbjct: 519 NRSDIPSVSCDADKSCLRSPQESQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKL 578
Query: 644 AIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
MF IE + V+Y D + GD+P+ +F +++ I
Sbjct: 579 EEMFDIEGELCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFI 626
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 223 bits (568), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 146/218 (66%), Gaps = 11/218 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFC 59
+K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ N P +P + C
Sbjct: 18 KKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLT 118
++ SL ADSETDEVYA++ L P+ + D + L S ++++PA F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYAQMTLQPV-----NKYDRDAMLASELGLKQNKQPAEFFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD+T PP Q ++AKD+H WKFRHIYRG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 221/711 (31%), Positives = 299/711 (42%), Gaps = 138/711 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S++ PS +P I C+V ++
Sbjct: 18 ELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEPQMPSFD-LPSKILCKVVNV 76
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A+ ETDEVYA+I L+P P +E+ D L + E SF KTLT SD +
Sbjct: 77 QRKAEPETDEVYAQITLLPDPDQSEVTSPDTPLP------EPERCTVHSFCKTLTASDTS 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 131 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 190
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVA GD + +R NG G
Sbjct: 191 VFVSSKKLVA-----------GDAFIFLR------------------GENGELRVG---- 217
Query: 244 GFSCFLREEEN---KMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+R++ N + + +M+L ++ A A+G
Sbjct: 218 -VRRLMRQQTNMPSSVISSQSMHLG---------------------VLATASHAIATGTL 255
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E+ F GTI V V
Sbjct: 256 FSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERR-FSGTI--VGVG 312
Query: 361 DPIS--WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLR- 416
D +S W +S WR L+V WDEP + RVS W +E LV+ P S P ++ R
Sbjct: 313 DNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVATTP----SNSQPVQRNKRA 368
Query: 417 ----LPQQLDFPFDG----QFTMPLFS------GNPLGPSSPLCCLSDNTSAGIQGARHA 462
LP D G Q FS G L PS + G G
Sbjct: 369 RPSVLPSTPDISSLGMWKPQTESTAFSYGDFQRGRDLYPSHNFSTSAKTNYLGFSGNSPL 428
Query: 463 QFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQN 522
G+S + + N+++ S F P G + + L + +GNSN
Sbjct: 429 S-GVSPNSLYRPNRVE-----SVTDSFVPVIDKDSGERRQGSGNGYRLFGIQLVGNSNAE 482
Query: 523 LEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGST 582
E S I + +P+ V + SD HS+ + S
Sbjct: 483 -ETSPLITTSGMVGDDRPV-----------------VSFDAESDQHSEPSNINRSEIPS- 523
Query: 583 HEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRR 642
IS E S RS Q +S KV ++ VGR +DL+ YE+L R+
Sbjct: 524 ----ISCEPEKSCL----RSPQELQSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLRK 575
Query: 643 LAIMFGIERSDMLS------HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L MF IE LS V+Y D + GD+P+ +F +++ I
Sbjct: 576 LEEMFDIEGE--LSGFSKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFI 624
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 145/218 (66%), Gaps = 11/218 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFC 59
+K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ N P +P + C
Sbjct: 18 KKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLT 118
++ SL ADSETDEVY ++ L P+ + D + L S ++++PA F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYVQMTLQPV-----NKYDRDAMLASELGLKQNKQPAEFFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD+T PP Q ++AKD+H WKFRHIYRG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 193 TTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + A+ GMRF+M FETEDS + +MGTI+ +
Sbjct: 262 PFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSG-VRRYMGTITGIGD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQV WDE + RVS W +E V+ I PF + +LP+
Sbjct: 321 LDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFF----RPKLPK 376
Query: 420 QLDFPFD 426
Q P D
Sbjct: 377 QPGMPDD 383
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERS-----DMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ Y+EL LA MFGI+ M ++Y D I GD+P+ +F
Sbjct: 951 VGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEF 1010
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1011 VGCVKSIKIL 1020
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 216/468 (46%), Gaps = 76/468 (16%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLI 57
+ E ++ +LWHACAG +V +P + VFYFPQGH E S N + + +P I
Sbjct: 81 DAEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKI 140
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
CRV ++ A+ ++DEVYA+I L+P E ++N + + + SF KTL
Sbjct: 141 LCRVINVDLKAEVDSDEVYAQITLLP----EAIQDENAIEKEAPPPPPPRFQVHSFCKTL 196
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG PRRHL
Sbjct: 197 TASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPRRHL 256
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
L +GWS FV+ K+LVA
Sbjct: 257 LQSGWSVFVSSKRLVA-------------------------------------------- 272
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA-- 295
G+ F FLR E NG + + + GN + M L +A A
Sbjct: 273 -GDAF----IFLRGE------NGELRVGVRRAMRQQGNVSSSVISSH-SMHLGVLATAWH 320
Query: 296 --ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
++G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GT
Sbjct: 321 AISTGTMFSVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGT 379
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I ++ +DP W S WR L+V WDE + RVSPW +E P LSP R
Sbjct: 380 IVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKLEPALAPPA--LSPVPMPRP 437
Query: 414 KLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARH 461
K P+ P ++ + G+ +G PL + S +QG H
Sbjct: 438 K--RPRSNIAPSSPDSSVLIREGSAMGNKDPLP--ASGLSRVLQGQEH 481
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 222 bits (566), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 161/510 (31%), Positives = 233/510 (45%), Gaps = 113/510 (22%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLI 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP P +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+Y ++ L P+ + E + + ++G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKETDEIYCQMTLQPLHS-----ETDVFPIPTLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRL-------------DYTADPPVQTVVAKDVHGEIW 163
LT SD + GGFSVPR AE +FP+L DY+ PP Q ++ +D+H +W
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNMW 206
Query: 164 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNE 223
FRHIYRG P+RHLLTTGWS F VG +R K G
Sbjct: 207 TFRHIYRGQPKRHLLTTGWSLF-----------------------VGAKRLKAGDS---- 239
Query: 224 YPSSGWNSNNGSCVTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNG 280
F+R+E++++ R + S S ++ G
Sbjct: 240 ----------------------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG 277
Query: 281 GRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFE 340
++ A A+SG F + Y PR S F + + A + GMRF M FE
Sbjct: 278 ------VLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFE 331
Query: 341 TEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 400
TE+SS+ G I + DP+ WPNS WR LQV WDE + +RVS W +E NM
Sbjct: 332 TEESSK-RRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENM 390
Query: 401 PVIHLSPFSPARKKLR---LPQQLDFPFDGQFTMPLFSGNPLGP---------------- 441
+ SP + R+ L +P L ++P GNP+G
Sbjct: 391 --VFSSPLNSKRQCLPSYGVP-GLQIGSVNMSSIPRAQGNPIGNLQHMPGMGSELALLLL 447
Query: 442 -------SSPLCCLSDNTSAGIQGARHAQF 464
SP+ C + S+ IQ A+H+ F
Sbjct: 448 NQSGQNIGSPIACQQSSFSSIIQNAKHSYF 477
>gi|304308217|gb|ADL70421.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 272
Score = 222 bits (565), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 138/296 (46%), Positives = 176/296 (59%), Gaps = 31/296 (10%)
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
SRISWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I
Sbjct: 1 SRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIP 60
Query: 405 LSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--- 460
L+ FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR
Sbjct: 61 LTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNA 120
Query: 461 HAQFGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGN 518
H +G+SSSD H N+ S + R+ D +E C LTMG
Sbjct: 121 HQYYGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGT 173
Query: 519 SNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDG 578
+ N KS KK +LFG+ I E+Q+S S D + ++ +
Sbjct: 174 TPCNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQIS 216
Query: 579 SGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVL 633
SG +++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL
Sbjct: 217 SGGSNQNGVAGRELSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVL 272
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 152/427 (35%), Positives = 209/427 (48%), Gaps = 76/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG +V +P S V Y PQGH + G ++ +PP + CRV+ ++ AD+
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGD---VAADLPPHVVCRVADVELCADA 80
Query: 71 ETDEVYAKIKLVPIPANEIDFEDN--------NLSLNSVGSDSESEKPASFAKTLTQSDA 122
TDEV A++ LV A F N + + ++ +S F KTLT SD
Sbjct: 81 ATDEVCARLALV---AEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S+FVN+KKLV+GD+++FLR DG+L +G+RRA +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQ-------------------------- 231
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP-F 301
L+ E + FNS R + L AVA + + F
Sbjct: 232 ------LKNEA------------LFEDFNSDSTKRHS---------LTAVADSLKNRSVF 264
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSVQV 359
+ Y PRA+ E+ + + ++ H +C G R ED S R S G + +
Sbjct: 265 HISYNPRATASEYIIPYAKFLKSLN-HPVCIGARINFQCHNEDVSERRS---GVVVRISE 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WP S WR L V W++ RVSPW +E+ + S + + K+ +L
Sbjct: 321 IDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSHSLSASSSKRTKLCP 380
Query: 420 Q--LDFP 424
Q LD P
Sbjct: 381 QGNLDVP 387
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 221 bits (564), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 195/401 (48%), Gaps = 70/401 (17%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
KSI+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETECVPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD+ETDEVYA++ L P+ ++ L + +G + F KTLT S
Sbjct: 78 LHNVTLHADAETDEVYAQMTLQPVSK----YDKEALLASDLGLKQSRQPVEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VA+D+H W FRHIYRG P+RHL
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHL--- 190
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
L G S+ V +R
Sbjct: 191 ----------LTTGWSVF----------VSTKRL-------------------------- 204
Query: 241 PFGGFSC-FLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
F G S F+R+E++++ R N + S S ++ G ++ A AA
Sbjct: 205 -FAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIG------ILAAAAHAAA 257
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+ PF + Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+
Sbjct: 258 NNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITG 316
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
+ D W NS WR LQV WDE + RVS W +E V
Sbjct: 317 ISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPV 357
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 968 VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWE 1025
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1026 EFVSCVQSIKIL 1037
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 143/217 (65%), Gaps = 9/217 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K I+ +LWHACAG +V +PP+ S V YFPQGH+E S++ PS +P + C
Sbjct: 18 KKPINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTVPSYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
++ SL ADSETDEVYA++ L P+ ++ + + + +G + F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYAQMMLQPV----NKYDRDAMLASELGLKQNKQPTEFFCKTLTA 133
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD+T PP Q ++AKD+H WKFRHIYRG P+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASR 230
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + A+ GMRF+M FETEDS + +MGTI+ +
Sbjct: 262 PFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSG-VRRYMGTITGIGD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQV WDE + RVS W +E V+ I PF + +LP+
Sbjct: 321 LDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFF----RPKLPK 376
Query: 420 QLDFPFD 426
Q P D
Sbjct: 377 QAGMPDD 383
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ YE+L LA MFGI+ R+D ++Y D I GD+P+
Sbjct: 950 VGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDW--KLVYVDHENDILLVGDDPWE 1007
Query: 677 DFMKSAKRLTIL 688
+F+ K + IL
Sbjct: 1008 EFVSCVKSIKIL 1019
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 221 bits (562), Expect = 1e-54, Method: Composition-based stats.
Identities = 106/143 (74%), Positives = 119/143 (83%), Gaps = 12/143 (8%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA+PPVQTV+AKD+HGE WKFRHIYR
Sbjct: 1 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYR 60
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GTPRRHLLTTGWSTFVNQKKL+AGDSIVFLR++ GDLCVGIRRAK+G
Sbjct: 61 GTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRG------------G 108
Query: 231 SNNGSCVTGNPFGGFSCFLREEE 253
+ + +P+ GFS FLR++E
Sbjct: 109 LGSNGLGSDSPYSGFSGFLRDDE 131
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/222 (50%), Positives = 145/222 (65%), Gaps = 16/222 (7%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS------RIPPLIFCRV 61
+D + WHACAG +V +P + V YFPQGH E L S N ++ +P IFCRV
Sbjct: 72 LDSEAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRV 131
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDF-------EDNNLSLNSVGSDSESEKPASFA 114
+L A ETDEVYA++ LVP NE+ + D +L L+ + S++ K + F
Sbjct: 132 LNLSLGAYRETDEVYAQMTLVP--ENELFYIRISDQQLDQSLELDEPTASSKA-KLSMFC 188
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
K LT SD + GGFSVPR AE FPRLDY PP Q ++AKD+HG WKFRHIYRG PR
Sbjct: 189 KNLTSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPR 248
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RHLLTTGWS FV+QKKLVAGD+++F+R +G+L +GIRRA +
Sbjct: 249 RHLLTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVR 290
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 64/109 (58%), Gaps = 2/109 (1%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL A A A S K F V Y PRAS EF V + +++ L GMRFKM FETEDSS
Sbjct: 310 VLAAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSE 369
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+MGTI+ + DP WP S WR L+V WDE + +RVSPW +E
Sbjct: 370 -RRYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIE 417
Score = 42.4 bits (98), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS--HVLYQDASGAIKRTGDEPFSDFMKS 681
VGR LDLS Y +L L +FGI+ S S +Y D G + GD+P+ +F +
Sbjct: 676 VGRALDLSKFRGYTQLLEELQHLFGIDESLNGSEWQTVYVDNEGDMLLVGDDPWEEFCTT 735
Query: 682 AKRLTIL 688
+ + IL
Sbjct: 736 VRCIRIL 742
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/422 (34%), Positives = 209/422 (49%), Gaps = 74/422 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 33 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQL 92
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD ETDE+YA++ L P+ + E + + ++G+ ++S+ P+ F K
Sbjct: 93 LCQVHNITLHADKETDEIYAQMTLQPVHS-----ETDVFPIPTLGAYTKSKHPSEYFCKN 147
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYR P+RH
Sbjct: 148 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LLTTGWS F VG +R K G
Sbjct: 207 LLTTGWSLF-----------------------VGAKRLKAGDS----------------- 226
Query: 237 VTGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVA 293
F+R+E++++ R + S S ++ G ++ A
Sbjct: 227 ---------VLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIG------VLAAAAH 271
Query: 294 LAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+SG F V Y PR S F + + A + GMRF M FETE+SS+ GT
Sbjct: 272 AASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSK-RRCTGT 330
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
I + +P+ WPNS WR LQV WDE + +RVS W +E NM + SP + R+
Sbjct: 331 IVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIETPENM--VFSSPLNSKRQ 388
Query: 414 KL 415
L
Sbjct: 389 CL 390
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 139/398 (34%), Positives = 193/398 (48%), Gaps = 65/398 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIF 58
E ++ +LWHACAG +V +P V+YFPQGH E S N + + +PP I
Sbjct: 1 EDALYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLPPKIL 60
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
CRV +++ A+ +TDEV+A++ L+P+ ++D + + + SF K LT
Sbjct: 61 CRVVNVQLKAELDTDEVFAQVILLPVAEQDVDLVEKE----DLPPPPARPRVHSFCKMLT 116
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL
Sbjct: 117 ASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPRRHLL 176
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
+GWS FV+ AKK V
Sbjct: 177 QSGWSLFVS--------------------------AKK-------------------LVA 191
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS- 297
G+ F FLR E ++ R G S S S + + +L V A S
Sbjct: 192 GDAF----IFLRGETEEL-RVGVRRALSQPSNVPSSVMSSHSMHIG---ILATVWHAVST 243
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
G F V Y PR S EF + + ++++++ GMRFKM FE E++ F GT+ V
Sbjct: 244 GSMFTVYYKPRTSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAPEQR-FSGTVIGV 302
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ ADP WP S WR L+V WDE + RVSPW +E
Sbjct: 303 EEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIE 340
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 142/217 (65%), Gaps = 11/217 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+N P+ +P + C
Sbjct: 18 KNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQ 119
+ ++ AD ETDEVYA++ L P+ +E L + +G +S +PA F KTLT
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPV----NKYEKEALLASDIGL-KQSRQPAEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LDY+ PP Q +VA+D+H W FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
D + W NS WR LQV WDE + RVS W VE V
Sbjct: 320 MDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPV 357
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 981 VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWD 1038
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1039 EFVSCVQSIKIL 1050
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 187/399 (46%), Gaps = 80/399 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACAG +V +P VFYFPQGH E S N + +PP I CRV ++
Sbjct: 51 ELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCRVINVM 110
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SFAKTLTQS 120
A+ +TDEV+A++ L+P P N N+V + P SF KTLT S
Sbjct: 111 LKAEPDTDEVFAQVTLLPEP---------NQDENAVEKEGPPAPPPRFHVHSFCKTLTAS 161
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG PRRHLL +
Sbjct: 162 DTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQS 221
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWS FV+ K+LVA GD + +R NG G
Sbjct: 222 GWSVFVSSKRLVA-----------GDAFIFLR------------------GENGELRVGV 252
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA----A 296
M + GN+ + S + M L +A A
Sbjct: 253 ------------RRAMRQQGNVPSSVISSHS---------------MHLGVLATAWHAIL 285
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 286 TGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE-QRFTGTIVG 344
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
++ AD WP S WR L+V WDE + +RVS W +E
Sbjct: 345 IEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIE 383
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 142/217 (65%), Gaps = 11/217 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+N P+ +P + C
Sbjct: 18 KNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQ 119
+ ++ AD ETDEVYA++ L P+ +E L + +G +S +PA F KTLT
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPV----NKYEKEALLASDIGL-KQSRQPAEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LDY+ PP Q +VA+D+H W FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
D + W NS WR LQV WDE + RVS W VE V
Sbjct: 320 MDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPV 357
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 981 VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWD 1038
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1039 EFVSCVQSIKIL 1050
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 155/424 (36%), Positives = 203/424 (47%), Gaps = 69/424 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E + Q W ACAG +V +P + VFYFPQGH E S N + RIP L I C
Sbjct: 18 EDELYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ LA+ ETDEVYA+I LVP + +D + + ++ SF+K LT
Sbjct: 78 RVVNVHLLAEQETDEVYAQITLVPESS-----QDEPTNADPCTAEPPRAPVHSFSKVLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A P LD + P Q +VAKD+HG W+F+HI+RG PRRHLLT
Sbjct: 133 SDTSTHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFV K+LVA GD V +R +NG
Sbjct: 193 TGWSTFVTSKRLVA-----------GDTFVFLR------------------GDNGE---- 219
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
LR ++AR + +S S S VL + A + +
Sbjct: 220 ---------LRVGVRRLARQASSMPSSVISSQSMHLG-----------VLATASHAVATQ 259
Query: 300 PFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI-SWFMGTISSV 357
VVYY PR S +F + + AM + GMRFKM FE +DS+ F GTI V
Sbjct: 260 TLFVVYYKPRTS--QFIIGVNKYLEAMDKKFSVGMRFKMRFEGDDSAETDKRFSGTIVGV 317
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLR 416
+ P W NS WR L+V WDEP + RVSPW +E V++ + P K+ R
Sbjct: 318 EDISP-HWVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRPR 376
Query: 417 LPQQ 420
P +
Sbjct: 377 PPSE 380
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGR 626
GH V +S + ++S + + S + +R+ KV ++ VGR
Sbjct: 549 GHKSDVSMASSMERKQEQLQVSPKDTQSKQICRSRT-------------KVQMQGVAVGR 595
Query: 627 TLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKRTGDEPFSDFMKS 681
+DL++L Y +L L MF I+ L H +++ D G + GD+P+ +F
Sbjct: 596 AVDLTMLDGYGQLINELEDMFNIK--GQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNM 653
Query: 682 AKRLTI 687
+R+ I
Sbjct: 654 VRRIFI 659
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 141/217 (64%), Gaps = 9/217 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K+I+ QLWHACAG +V +PP+ S V YFPQGH+E S+ P+ +P + C
Sbjct: 17 KKAINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ S+ AD+ETDEVYA++ L P+ N+ D E L + +G + F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPV--NKYDREA--LLASDMGLKINRQPTEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANR 229
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + + PRAS EF V + A+ GMRF+M FETED + +MGT++ +
Sbjct: 261 PFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKLR 416
DP+ W S WR LQV WDE RVS W +E PVI +PF P + +
Sbjct: 320 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE-----PVI--TPFYICPPPFFRPK 372
Query: 417 LPQQLDFPFD 426
P+Q P D
Sbjct: 373 YPRQPGMPDD 382
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLS--HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YEEL LA MFGIE +S ++Y D I GD+P+ +F
Sbjct: 932 VGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVYTDHENDILLVGDDPWEEF 991
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 992 VNCVQNIKIL 1001
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 143/221 (64%), Gaps = 16/221 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV---------NFPSSSRIPP 55
+K I+P+LW ACAG +V +PP V YFPQGH+E S+ N+PS +
Sbjct: 24 KKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPS---LAS 80
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C + ++ AD ETDEVYA++ L+P+P+ F+ + L + + S +P F K
Sbjct: 81 KLLCLLHNVTLHADPETDEVYAQMTLLPVPS----FDKDALLRSDLALKSNKPQPEFFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H +W FRHIYRG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 197 HLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANR 237
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + A+ + + GMRF+M FETE+S +MGTI+ +
Sbjct: 269 PFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESG-TRRYMGTITGIS 327
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKL 415
DP+ W S WR LQV WDE + RVS W +E PVI +PF P +
Sbjct: 328 DLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIE-----PVI--APFFICPPPFLRS 380
Query: 416 RLPQQLDFP------FDGQFTMPLF 434
+ P+Q P DG F +F
Sbjct: 381 KRPRQPGMPDDDSSDLDGIFKRTMF 405
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE R + ++Y D + GD+P+ DF
Sbjct: 1006 VGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDVLLVGDDPWDDF 1065
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1066 VNCVRSIKIL 1075
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 10/221 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPP 55
K +KSI+P+LW ACAG +V +PP + V YFPQGH+E S+ P+ +P
Sbjct: 22 KGEKKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 81
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C + ++ AD ETDEVYA++ L P+PA ++ +L + + + + F K
Sbjct: 82 RLLCILHNVTLHADPETDEVYAQMTLQPVPA----YDKESLLRSDLALKTNKPQTDFFCK 137
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H +W FRHIYRG P+R
Sbjct: 138 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKR 197
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+L AGD+++F+R + L +GIRRA +
Sbjct: 198 HLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANR 238
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KAA GMRF+M FETE+S +MGTI+ +
Sbjct: 270 PFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 328
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 329 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVT 368
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 1016 VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 1075
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1076 VNCVRCIKIL 1085
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+KSI+P+LW ACAG +V +PP + V YFPQGH+E S+ P+ +P +
Sbjct: 23 KKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLL 82
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD ETDEVYA++ L P+PA ++ +L + + + + F KTLT
Sbjct: 83 CILHNVTLHADPETDEVYAQMTLQPVPA----YDKESLLRSDLALKTNKPQTDFFCKTLT 138
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H +W FRHIYRG P+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 198
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L AGD+++F+R + L +GIRRA +
Sbjct: 199 TTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANR 236
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KAA GMRF+M FETE+S +MGTI+ +
Sbjct: 268 PFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 326
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 327 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVT 366
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 933 VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 992
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 993 VNCVRCIKIL 1002
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/217 (48%), Positives = 140/217 (64%), Gaps = 9/217 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K I+ QLWHACAG +V +PP+ S V YFPQGH+E S+ P+ +P + C
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ S+ AD+ETDEVYA++ L P+ N+ D E L + +G + F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPV--NKYDREA--LLASDMGLKLNRQPTEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANR 229
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + + PRAS EF V + A+ GMRF+M FETED + +MGT++ +
Sbjct: 261 PFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKLR 416
DP+ W S WR LQV WDE RVS W +E PVI +PF P + +
Sbjct: 320 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE-----PVI--TPFYICPPPFFRPK 372
Query: 417 LPQQLDFPFD 426
P+Q P D
Sbjct: 373 YPRQPGMPDD 382
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL LA MFGIE D L+ ++Y D I GD+P+ +F
Sbjct: 969 VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEF 1028
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1029 VNCVQNIKIL 1038
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 141/211 (66%), Gaps = 8/211 (3%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-IPPLIFCRVSSLKFLAD 69
+LWHACAG ++ +P + V Y PQGH E +FP+S+ +PP +FCRV +K A+
Sbjct: 41 ELWHACAGPLISLPKKGTVVVYLPQGHLEQV---SDFPTSAYDLPPHLFCRVVDVKLHAE 97
Query: 70 SETDEVYAKIKLVP----IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
S TD+V+A++ LVP I ++ E + V + +S P F KTLT SD +
Sbjct: 98 SGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKSTTPHMFCKTLTASDTSTH 157
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR AE FP LDYT P Q +VAKD+HG W+FRHIYRG PRRHLLTTGWS F
Sbjct: 158 GGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQPRRHLLTTGWSAF 217
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
VN+KKLV+GD+++FLR DG+L +GIRRA +
Sbjct: 218 VNKKKLVSGDAVLFLRGDDGELRLGIRRAAQ 248
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 288 VLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI 347
V + V ++ F V Y PRAS+ EF + + ++ + GMRFKM FETED++
Sbjct: 268 VTDVVNAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDAAER 327
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ G I+ + DPI WP S W+ L V WD+ D ++ RVSPW +E
Sbjct: 328 R-YTGLITGIGALDPIRWPGSKWKCLVVRWDDIDTSKH-GRVSPWEIE 373
>gi|284811289|gb|ADB96383.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 271
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 174/295 (58%), Gaps = 31/295 (10%)
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
SWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+
Sbjct: 1 SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTS 60
Query: 408 FSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQ 463
FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR H
Sbjct: 61 FSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQY 120
Query: 464 FGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQ 521
+G+SSSD H N+ S + R+ D +E C LTMG +
Sbjct: 121 YGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTPC 173
Query: 522 NLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGS 581
N KS KK +LFG+ I E+Q+S S D + ++ + SG
Sbjct: 174 NDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSGG 216
Query: 582 THEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVLSS 635
+++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL S
Sbjct: 217 SNQNGVAGRELSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVLGS 271
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 143/217 (65%), Gaps = 9/217 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+N P+ +P + C
Sbjct: 18 KKAINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVDVIPNYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
++ SL ADSETDEVYA++ L P+ ++ + + + +G + F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYAQMTLQPVSK----YDRDAMLASELGLKQNKQPMEFFCKTLTA 133
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD+ PP Q ++AKD+H WKFRHI+RG P+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKRHLLT 193
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L+AGDS++F+R + L +GIRR+ +
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTR 230
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + A+ GMRF+M FETEDS + +MGTI+ +
Sbjct: 262 PFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSG-VRRYMGTITGIGD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQV WDE + RVS W +E V+ I PF + +LP+
Sbjct: 321 LDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFF----RPKLPK 376
Query: 420 QLDFPFD 426
Q P D
Sbjct: 377 QPGMPDD 383
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERS-----DMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ +Y+EL LA MFGI+ M ++Y D I GD+P+ +F
Sbjct: 958 VGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLVYVDHENDILLVGDDPWEEF 1017
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1018 VSCVKSIKIL 1027
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ +E + + +G + F KTLT S
Sbjct: 78 LHNVALHADPETDEVYAQMTLQPV----NKYEKEAILASDMGLKQNRQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LDY+ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANR 229
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF V + GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESG-VRRYMGTITGIND 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
DP+ W +S WR +QV WDE + RVS W +E V
Sbjct: 320 LDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPV 357
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 1014 VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDW--KLVYVDHENDILLVGDDPWD 1071
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1072 EFVSCVQSIKIL 1083
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 144/217 (66%), Gaps = 9/217 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K+I+ +LWHAC+G +V +PP+ S V YFPQGH+E S++ P+ +P + C
Sbjct: 18 KKAINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVDIIPNYPSLPSKLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
++ SL ADSETDEVYA++ L P+ ++ + + + +G + F KTLT
Sbjct: 78 KLLSLTLHADSETDEVYAQMTLQPV----NKYDRDAMLASELGLKQNKQPVEFFCKTLTA 133
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD+T PP Q ++AKD+H WKFRHI+RG P+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKRHLLT 193
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATR 230
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + A+ GMRF+M FETEDS + +MGTI+ +
Sbjct: 262 PFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSG-VRRYMGTITGIGD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQV WDE + RVS W +E V+ I PF + +LP+
Sbjct: 321 LDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIEPVATPFYICPPPFF----RPKLPK 376
Query: 420 QLDFPFD 426
Q P D
Sbjct: 377 QPGMPDD 383
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 146/221 (66%), Gaps = 10/221 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPP 55
+E +KSI+P+LW ACAG +V +PP + V YFPQGH+E S+N P+ +P
Sbjct: 16 EEKKKSINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPS 75
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C + +L LAD ETDEVYA+I L P+P+ F+ + L + + S +P F K
Sbjct: 76 KLLCLLHNLTLLADPETDEVYAQITLQPVPS----FDKDALLRSDLALKSSKPQPDFFCK 131
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
LT SD + GGFSVPR A+ IFP LDY+ PP Q +VA+D+H +W FRHIYRG P+R
Sbjct: 132 QLTASDTSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPKR 191
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 192 HLLTTGWSLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANR 232
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PR S EF + + ++ H GMRF+M FETEDS +MGTI+ +
Sbjct: 264 PFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSG-TRRYMGTITGIS 322
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 323 DLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIEPVT 362
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YEEL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 1009 VGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESDVLLVGDDPWEEF 1068
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1069 VNCVRCIKIL 1078
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 199/412 (48%), Gaps = 66/412 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH------SLGSVNFPSSSRIPPLIFCRVSSL 64
+LW CAG +V I V YFPQGH E G + P + +P IFC+V +
Sbjct: 34 ELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYN-LPSKIFCKVVYV 92
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A++ TDEV+A++ L+P E D+ NS + SF+KTLT SD N
Sbjct: 93 QLKAEACTDEVFAQVTLLPEAKQEWQSPDHG---NSQFFPRRTHS-YSFSKTLTPSDTNT 148
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVP+ A+ P LD T PPVQ ++AKD+HG W+FRHI+RG P+RHLLT+GWS
Sbjct: 149 HGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGWSQ 208
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV KKLVAGD+ +FLR +G+L VG+
Sbjct: 209 FVTSKKLVAGDACIFLRGANGELRVGV--------------------------------- 235
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
R N+ + SG++ +G ++ A ++G F V
Sbjct: 236 -------------RRATRLQNNVSASVLSGHSMQHG------ILASAFHAISTGTMFTVY 276
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
+ P S PEF + + ++ G RF+M FE E+ S+ GTI ++ D I
Sbjct: 277 FRPWTS-PEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQ-QRCAGTIVGIEDVDAIR 334
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
WPNS WR +V WD D+ +RV+ W +E + + H S P K+ R
Sbjct: 335 WPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTS-ILPQLKRAR 385
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 196/415 (47%), Gaps = 70/415 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW CAG +V +P V+YFPQGH E + S+N R+P + CRV +
Sbjct: 13 ELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSFNLKSKVLCRVINSH 72
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLA+ + DEVY +I L+P E + + + + SF K LT SD +
Sbjct: 73 FLAEEDNDEVYVQITLMP----EAPHVPEPTTPDPLIPQDVKPRFHSFCKVLTASDTSTH 128
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD P Q ++AKD+H W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 129 GGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRRHLLTTGWSTF 188
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ KKLVAGDS VFLR NNG G
Sbjct: 189 VSSKKLVAGDSFVFLRG-----------------------------NNGQLRVG-----V 214
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+R++ + + + G VL + A + + VVY
Sbjct: 215 KRLVRQQSSMPSSVMSSQSMHLG-------------------VLATASHAVTTQTMFVVY 255
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS- 364
Y + T +F V + A++ + GMRFKM FE E + FMGTI + D +S
Sbjct: 256 Y-KPRTTQFIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDRR-FMGTIVGI---DDLSS 310
Query: 365 -WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRL 417
W NS WR L+V WDEP + RVSPW ++ V ++P + + P + K+ RL
Sbjct: 311 QWKNSAWRSLKVRWDEPAAIARPDRVSPWEIKPYVCSIPNVLVPPTAEKNKRHRL 365
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH 657
+ Q +S KV ++ VGR +DL++L Y+EL + L MF I+ +S
Sbjct: 539 KEVQSKQSCSTRSRTKVQMQGVAVGRAVDLTILKGYDELTKELEEMFEIQGELQSRQKWG 598
Query: 658 VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
+L+ D G GD P+ DF +++ I
Sbjct: 599 ILFTDDEGDTMLMGDYPWQDFCNVVRKIFI 628
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 140/216 (64%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
KSI+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KSINSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD+ETDEVYA++ L P+ N+ D E L + +G + F KTLT S
Sbjct: 78 LHNVTLHADAETDEVYAQMTLQPV--NKYDKE--ALLASDMGLKQSRQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VA+D+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + S AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
DP+ W S WR LQV WDE + RVS W VE V
Sbjct: 320 LDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPV 357
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ Y+EL LA MFGIE D S ++Y D I GD+P+ +F
Sbjct: 1003 VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEF 1062
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1063 VSCVQSIKIL 1072
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/218 (47%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLI------F 58
+K I+P+LW ACAG +V +PP V YFPQGH+E S+ ++ + F
Sbjct: 24 KKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVTIYLYHYYFAF 83
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
++ SL AD ETDEVYA++ L+P+P+ F+ + L + + S +P F KTLT
Sbjct: 84 LKLCSLYLXADPETDEVYAQMTLLPVPS----FDKDALLRSDLALKSNKPQPEFFCKTLT 139
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H +W FRHIYRG P+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 199
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 200 TTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANR 237
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + A+ + + GMRF+M FETE+S +MGTI+ +
Sbjct: 269 PFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESG-TRRYMGTITGIS 327
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKL 415
DP+ W S WR LQV WDE + RVS W +E PVI +PF P +
Sbjct: 328 DLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIE-----PVI--APFFICPPPFLRS 380
Query: 416 RLPQQLDFP------FDGQFTMPLF 434
+ P+Q P DG F +F
Sbjct: 381 KRPRQPGMPDDDSSDLDGIFKRTMF 405
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE R + ++Y D + GD+P+ DF
Sbjct: 1006 VGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDVLLVGDDPWDDF 1065
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1066 VNCVRSIKIL 1075
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/412 (34%), Positives = 199/412 (48%), Gaps = 66/412 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH------SLGSVNFPSSSRIPPLIFCRVSSL 64
+LW CAG +V I V YFPQGH E G + P + +P IFC+V +
Sbjct: 139 ELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYN-LPSKIFCKVVYV 197
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A++ TDEV+A++ L+P E D+ NS + SF+KTLT SD N
Sbjct: 198 QLKAEACTDEVFAQVTLLPEAKQEWQSPDHG---NSQFFPRRTHS-YSFSKTLTPSDTNT 253
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVP+ A+ P LD T PPVQ ++AKD+HG W+FRHI+RG P+RHLLT+GWS
Sbjct: 254 HGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRHLLTSGWSQ 313
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV KKLVAGD+ +FLR +G+L VG+
Sbjct: 314 FVTSKKLVAGDACIFLRGANGELRVGV--------------------------------- 340
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
R N+ + SG++ +G ++ A ++G F V
Sbjct: 341 -------------RRATRLQNNVSASVLSGHSMQHG------ILASAFHAISTGTMFTVY 381
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
+ P S PEF + + ++ G RF+M FE E+ S+ GTI ++ D I
Sbjct: 382 FRPWTS-PEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQR-CAGTIVGIEDVDAIR 439
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
WPNS WR +V WD D+ +RV+ W +E + + H S P K+ R
Sbjct: 440 WPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTS-ILPQLKRAR 490
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 147/218 (67%), Gaps = 10/218 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+S++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP + C
Sbjct: 15 RSLNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLIC 74
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
++ ++ AD ETDEVYA++ L P+ N + +++ L+ ++G+ S + F KTLT
Sbjct: 75 QLHNVTLQADVETDEVYAQMTLQPL--NPQEPKESYLA-PALGTPS-GQPTNYFCKTLTA 130
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFS+PR AE +FP LD+T PPVQ ++A+D+H WKFRHIYRG P+RHLLT
Sbjct: 131 SDTSTHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPKRHLLT 190
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG 217
TGWS FV+ K+LVAGDS++F+R G L +GIRRA +
Sbjct: 191 TGWSVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRA 228
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF V A KA GMRF+M FETE+S+ + +MGTI+ +
Sbjct: 260 FTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEEST-VRRYMGTITGIGD 318
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
DP W NS WR ++V WDE + RVS W +E ++ +++ P+ P K+
Sbjct: 319 LDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIEPLTTF-LMYPPPYPPGLKR 372
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KTINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ N+ D E L + +G + F KTLT S
Sbjct: 78 LHNVALHADPETDEVYAQMTLQPV--NKYDKEA--LLASDMGLKQNQQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GI+RA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANR 229
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
++ PF + Y PRAS EF + + A+ GMRF+M FETE+S + +MGTI+
Sbjct: 257 SNNSPFTIFYNPRASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESG-VRRYMGTIT 315
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
+ DP+ W NS WR LQV WDE + RVS W +E V
Sbjct: 316 GITDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPV 357
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R++ ++Y D I GD+P+
Sbjct: 1009 VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEW--KLVYVDHENDILLVGDDPWE 1066
Query: 677 DFMKSAKRLTILMGS 691
+F+ + + IL S
Sbjct: 1067 EFVSCVQSIKILSSS 1081
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 216 bits (550), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/220 (50%), Positives = 142/220 (64%), Gaps = 17/220 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP-SSSRIPPLIFCRVSS 63
+ S+ +LWHACAG ++ +P S V Y PQGH E + +FP S+ IPP +FCRV
Sbjct: 47 QGSVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQAH---DFPVSACNIPPHVFCRVLD 103
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK---------PASFA 114
+K A+ +DEVY ++ LVP E + N+ + +D+E E P F
Sbjct: 104 VKLHAEEGSDEVYCQVLLVP----ENQQLEQNVREGVIDADAEEEDTEAIVKSTTPHMFC 159
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PR
Sbjct: 160 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYRGQPR 219
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
RHLLTTGWS FVN+KKLV+GD+++FLR +DG+L +GIRRA
Sbjct: 220 RHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRA 259
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 282 RVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFET 341
++ P +++ V + F V Y PR S+ EF + + ++ + GMRF+M FET
Sbjct: 275 QLDPGSLMDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFET 334
Query: 342 EDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
ED++ F G I+ + ADP+ WP S W+ L V WD+ + ++ RVSPW +E
Sbjct: 335 EDAAE-RRFTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIE 387
>gi|304308219|gb|ADL70422.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 271
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 135/294 (45%), Positives = 173/294 (58%), Gaps = 32/294 (10%)
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
SWFMGT+S+V V+DPI WPNSPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+
Sbjct: 1 SWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTS 60
Query: 408 FSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR---HAQ 463
FSP RKK+RLPQ D+ +P F NPL SSPL + DN G+QGAR H
Sbjct: 61 FSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQY 120
Query: 464 FGISSSDFH---VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSN 520
+G+SSSD H +N S + R+ D +E C LTMG +
Sbjct: 121 YGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNID-------TKNEKGFCFLTMGTTP 173
Query: 521 QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
N KS KK +LFG+ I E+Q+S S D + ++ + SG
Sbjct: 174 CNDTKS---KKSHIVLFGKLILPEEQLSEKGSTDTAN--------------IEKTQISSG 216
Query: 581 STHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTGHCKVFLESEDVGRTLDLSVL 633
+++ ++ + SSS+ S +V + SGL+TGHCKVF+ES+DVGRTLDLSVL
Sbjct: 217 GSNQNGVAGREFSSSDEGSPCSKKVHDASGLETGHCKVFMESDDVGRTLDLSVL 270
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 140/217 (64%), Gaps = 9/217 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K I+ QLWHACAG +V +PP+ S V YFPQGH+E S+ P+ +P + C
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ S+ AD+ETDEVYA++ L P+ N+ D E L + +G + F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPV--NKYDREA--LLASDMGLKLNRQPTEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L+AGDS++F+R + L + IRRA +
Sbjct: 193 TGWSVFVSTKRLIAGDSVLFVRDEKSQLTLVIRRANR 229
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + + PRAS EF V + A+ GMRF+M FETED + +MGT++ V
Sbjct: 261 PFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTGVSD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKLR 416
DP+ W S WR LQV WDE RVS W +E PVI +PF P + +
Sbjct: 320 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIE-----PVI--TPFYICPPPFFRPK 372
Query: 417 LPQQLDFPFD 426
P+Q P D
Sbjct: 373 YPRQPGMPDD 382
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ S Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 903 VGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSDW--KLVYTDHENDILLVGDDPWE 960
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 961 EFVNCVQNIKIL 972
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 143/396 (36%), Positives = 195/396 (49%), Gaps = 66/396 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFC 59
E + +LW CAG +V +P V+YFPQGH E S N + IP P I C
Sbjct: 25 EDELCQELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLFNLQPKILC 84
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ LA+ ++DEVYA+I L+P A++++ +LSL + K F K LT
Sbjct: 85 RVLHIQLLAEQDSDEVYAQIALLP-EADQVEPTSPDLSL----PEPPRPKVHFFCKVLTA 139
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFS+ R A P LD T P Q +VAKD+HG W F+HI+RG PRRHLLT
Sbjct: 140 SDTSTHGGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRRHLLT 199
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWSTFV+ K+LV GDS VFLR+ G++ + GI PSS S
Sbjct: 200 TGWSTFVSSKRLVTGDSFVFLRSGKGEVRI-------GIRRLARQPSSMPQS-------- 244
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+ + +M+L VL + A + +
Sbjct: 245 ----------------VISSQSMHLG----------------------VLATASHAVTTQ 266
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
VVYY + T +F + + A++ + GMRFKM FE E+ F GTI V+
Sbjct: 267 TMFVVYY-KPRTSQFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEKR-FTGTIVGVED 324
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ W +S WR L+V WDEP + RVSPW +E
Sbjct: 325 SSS-QWKDSKWRSLKVQWDEPASVPRPDRVSPWDIE 359
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 178/347 (51%), Gaps = 62/347 (17%)
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK------- 109
I CRV +K A+ DE+YA++ L + +E+ F D ++ + G + SE+
Sbjct: 2 IICRVVDVKLQAEVSNDELYAQVSL--LAEDEVGFLDESVVRSLNGGEEVSEENQGIRRT 59
Query: 110 -PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
P F KTLT SD + GGFSVPR AE FP LDY+ P Q + AKD++G IW+FRHI
Sbjct: 60 IPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHI 119
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSG 228
YRG PRRHLLTTGWS+F N+KKL GD+++FLR DG+L +GIRRA +
Sbjct: 120 YRGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATR------------ 167
Query: 229 WNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMV 288
+ CV P+ G C L +N+ S MV
Sbjct: 168 ---QSQCCV---PYTGLLCQL----------SRVNMLS--------------------MV 191
Query: 289 LEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRIS 348
+A+++ K F + Y PRAS EF V + + GMR K+ ETED+
Sbjct: 192 ADALSVK---KLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVE-K 247
Query: 349 WFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ G I+ V DPI WPNS WR L V WD+ RVSPW +E
Sbjct: 248 RYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIE 294
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 142/221 (64%), Gaps = 16/221 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV---------NFPSSSRIPP 55
+K I+P+LW ACAG +V +PP V YFPQGH+E S+ N+PS +
Sbjct: 24 KKIINPELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPS---LAS 80
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C + ++ AD ETDEVYA++ L+P+ + F+ + L + + S +P F K
Sbjct: 81 KLLCLLHNVTLHADPETDEVYAQMTLLPV----LSFDKDALLRSDLALKSNKPQPEFFCK 136
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H +W FRHIYRG P+R
Sbjct: 137 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKR 196
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 197 HLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANR 237
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + A+ + + GMRF+M FETE+S +MGTI+ +
Sbjct: 269 PFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESG-TRRYMGTITGIS 327
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKL 415
DP+ W S WR LQV WDE + RVS W +E PVI +PF P +
Sbjct: 328 DLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIE-----PVI--APFFICPPPFLRS 380
Query: 416 RLPQQLDFP------FDGQFTMPLF 434
+ P+Q P DG F +F
Sbjct: 381 KRPRQPGMPDDDSSDLDGIFKRTMF 405
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE R + ++Y D + GD+P+ DF
Sbjct: 1006 VGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHENDVLLVGDDPWDDF 1065
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1066 VNCVRSIKIL 1075
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 138/216 (63%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
KSI+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETECVPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD+ETDEVYA++ L P+ ++ L + +G + F KTLT S
Sbjct: 78 LHNVTLHADAETDEVYAQMTLQPVS----KYDKEALLASDLGLKQSRQPVEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VA+D+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITGISE 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
D W NS WR LQV WDE + RVS W +E V
Sbjct: 320 LDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPV 357
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 762 VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWE 819
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 820 EFVSCVQSIKIL 831
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 215 bits (548), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 144/217 (66%), Gaps = 11/217 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS------VNFPSSSRIPPLIFC 59
+S++ +LWHACAGS+V +PP+ S V YFPQGH E S V P+ +P +FC
Sbjct: 2 RSLNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFC 61
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ ++ AD ETDEVYA++ L+PI +E ++ L+ +SV + + + F KTLT
Sbjct: 62 LLDNVSLHADHETDEVYAQMTLLPIQNSE---KEALLAPDSVIPNKQPSE--YFCKTLTA 116
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFS+PR AE +FP LD+T PP Q +VA+D+H + W FRHIYRG PRRHLLT
Sbjct: 117 SDTSTHGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPRRHLLT 176
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 177 TGWSVFVSIKRLQAGDSVLFIRDDKDHLLLGIRRANR 213
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F++ Y PR S EF + A KA GMRF+MAFETE+S+ + +MGTI+ +
Sbjct: 246 FKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESN-VRKYMGTITCIGD 304
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DP WP S WR L+V WDE RVS W +E
Sbjct: 305 LDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIE 340
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 10/215 (4%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL------GSVNFPSSSRIPPLIFCRV 61
++ +LW ACAG +V +P + V YFPQGH+E G V P+ S +P + C +
Sbjct: 28 VNSELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKLPCTL 87
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
SL ADS+TDEVYA++ L P+ + F+ + + + + S +P F K LT SD
Sbjct: 88 HSLTLHADSDTDEVYARMTLQPVSS----FDMDAILRSDISLKSNKPQPEFFCKQLTASD 143
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP LD++A PP Q +VAKD+HG +WKFRHIYRG P+RHLLTTG
Sbjct: 144 TSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLLTTG 203
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS F++ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 204 WSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANR 238
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + A+ H + GMRF+M FETEDS +MGT+ V
Sbjct: 270 PFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSG-TRRYMGTVIGVS 328
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
D + W NS WR LQV WDE + RVS W +E V+
Sbjct: 329 DLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIEPVT 368
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 995 VGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHENDVLLVGDDPWEEF 1054
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1055 VNCVRCIKIL 1064
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ N+ D E + + +G + F KTLT S
Sbjct: 78 LHNVALHADPETDEVYAQMTLQPV--NKYDKEA--ILASDMGLKQNQQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GI+RA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANR 229
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
++ PF + Y PRAS EF + ++ A+ H GMRF+M FETE+S + +MGTI+
Sbjct: 257 SNNSPFTIFYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESG-VRRYMGTIT 315
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
+ DP+ W NS WR LQV WDE + RVS W +E V
Sbjct: 316 GITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPV 357
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 214 bits (546), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KCINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ +E L + +G + F KTLT S
Sbjct: 78 LHNVTLHADVETDEVYAQMTLQPVSK----YEKEALLASDMGLKQNRQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VA+D+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 229
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + S A+ GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESG-VRRYMGTITGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
DP+ W NS WR LQV WDE + RVS W +E V
Sbjct: 320 MDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPV 357
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ Y EL LA MFGIE D S ++Y D I GD+P+ +F
Sbjct: 941 VGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLVYVDHENDILLVGDDPWEEF 1000
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1001 VSCVQSIKIL 1010
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+++ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KTMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ +E + + +G + F KTLT S
Sbjct: 78 LHNVALHADPETDEVYAQMTLQPV----NKYEKEAILASDIGLKQNRQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE I P LDY+ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 194 GWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANR 229
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF V + AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRGYMGTITGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
DP+ W +S WR +QV WDE + +RVS W +E V
Sbjct: 320 LDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPV 357
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 1019 VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDW--KLVYVDHENDILLVGDDPWD 1076
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1077 EFVSCVQSIKIL 1088
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 154/420 (36%), Positives = 201/420 (47%), Gaps = 71/420 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V +P + VFYFPQGH E S N RIP I CRV +
Sbjct: 23 ELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPSKILCRVVHTR 82
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LA+ ETDEVYA+I L P E D + S +S ++ + SF K LT SD +
Sbjct: 83 LLAEQETDEVYAQITLQP----EAD-QTEPKSPDSCPDEAPKQTVHSFCKILTASDTSTH 137
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD + P Q +VA+D+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 138 GGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 197
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V K+LVA GD V +R +NG
Sbjct: 198 VTSKRLVA-----------GDAFVFLR------------------GDNGE---------- 218
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
LR ++AR + +S S S VL + A + + VVY
Sbjct: 219 ---LRVGVRRLARQQSPMPSSVISSQSMHLG-----------VLATASHAVTTQTLFVVY 264
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S +F + + A+ + GMRFKM FE EDS F GTI + P
Sbjct: 265 YKPRTS--QFIISLNKYLEAVNYGFAVGMRFKMRFEGEDSPERR-FTGTIVGIGDISP-Q 320
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
W NS WR L++ WDEP +Q +RVS W +E ++L+ P K++ P+ LD P
Sbjct: 321 WSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLTQ-PPV--KIKRPRPLDLP 377
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 577 DGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSY 636
D S S++EQ+ + ++S E + Q T KV ++ VGR +DL+ L Y
Sbjct: 460 DVSKSSNEQKQVVPEASQKE---TQGRQSCTPSSRTRTKKVQMQGVAVGRAVDLTALEGY 516
Query: 637 EELYRRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
+EL L MF I + ++ V++ D G + GD+P+ +F K +++ I
Sbjct: 517 DELISELEKMFEI-KGELCPRNKWEVVFTDDEGDMMLVGDDPWQEFCKMVRKIFI 570
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 139/216 (64%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K ++ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 4 KLMNSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDGIPSYPNLPSKLICM 63
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD+ETDEVYA++ L P+ N+ D E L L+ +G + F KTLT S
Sbjct: 64 LHNVTLHADTETDEVYAQMTLQPV--NKYDQEA--LLLSEMGLKQNRQPAEFFCKTLTAS 119
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LDY PP Q ++A+D+H + W FRHIYRG P+RHLLTT
Sbjct: 120 DTSTHGGFSVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLTT 179
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS F++ K+L AGDS++F+R + L +GI+R +
Sbjct: 180 GWSVFISSKRLCAGDSVLFIRDEKSQLLLGIKRTNR 215
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+ V
Sbjct: 247 PFTIFYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESG-VRRYMGTITGVSD 305
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
DPI W +S WR LQV WDE + RVS W +E V
Sbjct: 306 LDPIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPV 343
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGRT+D++ Y+EL LA MFGIE R++ ++Y D I GD+P+
Sbjct: 1008 VGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEW--KLVYVDHENDILLVGDDPWE 1065
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1066 EFVSCVQSIKIL 1077
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 147/221 (66%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E +K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 1 EEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQ 60
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD+ETDEVYA++ L P+ E+ +D L +G+ S++P + F K
Sbjct: 61 LICQLHNVTMHADAETDEVYAQMTLQPLSPQEL--KDPFLPAE-LGT--ASKQPTNYFCK 115
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++AKD+HG WKFRHI+RG P+R
Sbjct: 116 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKR 175
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 176 HLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANR 216
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 13/158 (8%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 249 FTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 307
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 308 LDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPT 365
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQ 457
L L+ G +S L L D+ + G Q
Sbjct: 366 GLP---------SLYGGKEDDLASSLMWLRDSQNTGFQ 394
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 213 bits (542), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/221 (46%), Positives = 140/221 (63%), Gaps = 11/221 (4%)
Query: 3 EVEK-SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPP 55
EVEK SI+P+LW ACAG +V +P + V YFPQGH+E S+ P+ +P
Sbjct: 22 EVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPS 81
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C + ++ AD E DEVYA++ L P+P+ F+ L + + + + F K
Sbjct: 82 KLVCLLHNITLHADPEADEVYAQMTLQPVPS----FDKEALLRSDLSMKANKPQTEFFCK 137
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE IFP LDY+ PP Q +VA+D+H +W FRHIYRG P+R
Sbjct: 138 TLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQELVARDLHDNLWTFRHIYRGQPKR 197
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 198 HLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 238
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KA GMRF+M FETE+S +MGTI+ +
Sbjct: 270 PFTVFYNPRASHSEFVIPLAKYYKATYSSQVSLGMRFRMMFETEESG-TRRYMGTITGIS 328
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQV WDE + RVS W +E V+ I +P K+ RLP
Sbjct: 329 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVTAPFFICPTPPFFRSKRPRLP 388
Query: 419 QQLD---FPFDGQF--TMP 432
D DG F TMP
Sbjct: 389 GMPDDDCSDLDGLFKRTMP 407
Score = 45.1 bits (105), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YEEL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 1012 VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 1071
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1072 VNCVRCIKIL 1081
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 137/216 (63%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS +P + C
Sbjct: 18 KTINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + + + G + F KTLT S
Sbjct: 78 LHNVALHADPETDEVYAQMTLQPVNK----YDKDAILASDFGLKQNRQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS F++ K+L AGDS++F+R + L +G+RRA +
Sbjct: 194 GWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANR 229
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 59/109 (54%), Gaps = 1/109 (0%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF V + AM GMRF+M FETE+S + +MGT++ +
Sbjct: 261 PFTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTVTGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF 408
DP+ W NS WR LQV WDE + RVS W +E V I PF
Sbjct: 320 LDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVTPFYICPPPF 368
Score = 43.9 bits (102), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 1004 VGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWE 1061
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1062 EFVSCVQSIKIL 1073
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/220 (46%), Positives = 141/220 (64%), Gaps = 15/220 (6%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-------VNFPSSSRIPPLIF 58
+S++ +LWHACAG +V +PP+ S V YFPQGH E + + + P+ +P +
Sbjct: 6 RSLNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSRLV 65
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPI-PANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C + ++ AD ETDEVYA++ L+P+ PANE + +L S S +P F KT
Sbjct: 66 CLLDNVTLHADLETDEVYAQMTLIPVLPANEKE------ALISPDIGMRSRQPTEYFCKT 119
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFS+PR AE +FP LDYT PP Q + A+D+H + W FRHIYRG PRRH
Sbjct: 120 LTASDTSTHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQPRRH 179
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LLTTGWS FV+ K+L AGD+++F+R G L +GIRR +
Sbjct: 180 LLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNR 219
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PR S EF + A KA + GMRF+M FETE+SS + +MGTI+ +
Sbjct: 252 FTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEESS-VRRYMGTITGMGD 310
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
DPI WPNS WR L+V WDE + +RVS W +E
Sbjct: 311 LDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIE 346
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 115/253 (45%), Positives = 144/253 (56%), Gaps = 47/253 (18%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAE-------HSLG------------ 43
E S+ P+LWHACAG ++ +PP S V YFPQGH E H G
Sbjct: 30 ETGSSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAA 89
Query: 44 ----------SVNFPSSS------------RIPPLIFCRVSSLKFLADSETDEVYAKIKL 81
++N P SS ++PP I CRV ++ AD E DEVYA++ L
Sbjct: 90 PMAEEASSAAALNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTL 149
Query: 82 VPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPR 141
VP D E N + S S P F KTLT SD + GGFSVPR AE FP
Sbjct: 150 VP------DSEKNEKCMEEQLSVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 203
Query: 142 LDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
LDY+ P Q +VAKD+HG W+FRHI+RG PRRHLLTTGWS FV+ K+LVAGD+++FLR
Sbjct: 204 LDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLR 263
Query: 202 AQDGDLCVGIRRA 214
++G+L +GIRRA
Sbjct: 264 DENGELRLGIRRA 276
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 61/116 (52%), Gaps = 2/116 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PR S EF + + + GMRFKM FETED++ + GTI +
Sbjct: 311 FHIYYNPRTSPTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATERR-YTGTIVGIGDV 369
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
DP+ WPNS WR +V WDE + RVSPW +E ++ ++ P P K+LR
Sbjct: 370 DPMRWPNSRWRSFKVGWDEHAAQERQDRVSPWEIEPFTSATGLNALP-GPRVKRLR 424
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV + VGR +DLS L Y+EL R L +F +E +LS H++Y D G I
Sbjct: 795 KVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNME--GLLSTPEKGWHIVYTDNEGDIML 852
Query: 670 TGDEPFSDFMKSAKRLTI 687
GD+P+ +F ++ I
Sbjct: 853 VGDDPWQEFCNIVCKILI 870
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 212 bits (540), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 139/218 (63%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+KSI+ +LW ACAG +V +P + V YFPQGH+E S+ P+ +P +F
Sbjct: 29 KKSINQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLF 88
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD ETDEVYA++ L P+P+ F+ + L + + S + F KTLT
Sbjct: 89 CLLHNVTLHADPETDEVYAQMTLQPVPS----FDKDALLRSDLTLKSNKPQTDFFCKTLT 144
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD++ PP Q +VA+D+H IW FRHIYRG P+RHLL
Sbjct: 145 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPKRHLL 204
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 205 TTGWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANR 242
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KA GMRF+M FETE+S +MGTI+ +
Sbjct: 274 PFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 332
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 333 DLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIEPVT 372
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y EL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 1008 VGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 1067
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1068 VNCVRCIKIL 1077
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 144/253 (56%), Gaps = 47/253 (18%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAE-------HSLG------------ 43
E S+ P+LWHACAG ++ +PP S V YFPQGH E H +G
Sbjct: 30 ETGNSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVT 89
Query: 44 ----------SVNFPSSS------------RIPPLIFCRVSSLKFLADSETDEVYAKIKL 81
S+N P SS ++PP I CRV ++ AD E DEVYA++ L
Sbjct: 90 PMAEEASSAASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTL 149
Query: 82 VPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPR 141
VP D E + + S P F KTLT SD + GGFSVPR AE FP
Sbjct: 150 VP------DSEKSEKCIEEQLPVPPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 203
Query: 142 LDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
LDY+ P Q +VAKD+HG W+FRHI+RG PRRHLLTTGWS FV+ K+LVAGD+++FLR
Sbjct: 204 LDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVLFLR 263
Query: 202 AQDGDLCVGIRRA 214
++G+L +GIRRA
Sbjct: 264 DENGELRLGIRRA 276
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 2/116 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PR S EF + + + GMRFKM FETED++ + GTI +
Sbjct: 311 FHIFYNPRTSPTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATE-RRYTGTIVGIGDV 369
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
DP+ WPNS WR +V WDE + +RVSPW +E ++ ++ P P K+LR
Sbjct: 370 DPMRWPNSEWRSFKVGWDEHAAQERQERVSPWEIEPFTSATGLNALP-GPRVKRLR 424
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV + VGR +DLS L Y+EL R L +F +E +LS H++Y D G I
Sbjct: 796 KVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNME--GLLSTPEKGWHIVYTDNEGDIML 853
Query: 670 TGDEPFSDFMKSAKRLTI 687
GD+P+ +F ++ I
Sbjct: 854 VGDDPWQEFCNIVCKILI 871
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 146/223 (65%), Gaps = 13/223 (5%)
Query: 2 KEVEKSI-DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+E EK + D +LWHACAG +V +P + S V YFPQGH+E S N P+ +P
Sbjct: 13 QEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLP 72
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-F 113
P + C++ +L AD ETDEVYA++ L P+ A E + +G+ S++P + F
Sbjct: 73 PQLICQLHNLTMHADVETDEVYAQMTLQPLNAQE---QKEAYLPAELGT--PSKQPTNYF 127
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
KTLT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+HG WKFRHI+RG P
Sbjct: 128 CKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQP 187
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 230
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 87/171 (50%), Gaps = 18/171 (10%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRA EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
D + WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 322 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 379
Query: 420 QLDFPFDGQFTMPLFSG---NPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
L P F G + G SSPL L D T G+Q + G++
Sbjct: 380 GL----------PSFHGMKDDDFGMSSPLMWLRD-TDRGLQSLNYQGIGVN 419
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 610 LDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQD 662
L+ KV+ +S GR+LD++ SSY EL LA MFG+E RS +++ D
Sbjct: 773 LNKTFVKVY-KSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGW--QLVFVD 829
Query: 663 ASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRT 699
+ GD P+ +F+ S + IL +G T
Sbjct: 830 RENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNT 866
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 212 bits (539), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 156/420 (37%), Positives = 203/420 (48%), Gaps = 65/420 (15%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGH--AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLAD 69
LWHACAG +V +P S V Y PQGH A + G + + +PP + CRV ++ L
Sbjct: 26 LWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRGEVAVALPPHVACRVVDVE-LCV 84
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFS 129
SE + L + + + +S F KTLT SD + GGFS
Sbjct: 85 SEPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDEERKSRMLHMFCKTLTASDTSTHGGFS 144
Query: 130 VPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQK 189
VPR AE FP LD+ P Q +VAKD+HG W+FRHIYRG PRRHLLTTGWS+FVN+K
Sbjct: 145 VPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTTGWSSFVNKK 204
Query: 190 KLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFL 249
KLV+GD+++FLR DG+L +G+ ++ NE F FS
Sbjct: 205 KLVSGDAVLFLRGDDGELRLGV---RRATQLKNE----------------AIFKAFS--- 242
Query: 250 REEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS-GKPFEVVYYPR 308
E +KM L AVA + G F + Y PR
Sbjct: 243 -SESSKM------------------------------RTLSAVADSLKHGSVFHICYNPR 271
Query: 309 ASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSVQVADPISWP 366
A+ E+ V + H +C GMRFK FE+ED + R S G I+ V DPI WP
Sbjct: 272 ATASEYVVPYWKFVKSFN-HPVCIGMRFKFHFESEDVNERRS---GMIAGVSEVDPIRWP 327
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH-LSPFSPARKKLRLPQQLDFP 424
S WR L V W++ + RVSPW +E+V ++ V H LS S R KL LD P
Sbjct: 328 GSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSKRTKLCPQGNLDVP 387
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E EK ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F K
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTP-----EEQKETFVPIELGIPSKQPSNYFCK 128
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LDYT PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKR 188
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+R + L +GIR A +
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V ++PRAS EF ++ S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E EK ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F K
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTP-----EEQKETFVPIELGIPSKQPSNYFCK 128
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LDYT PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKR 188
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+R + L +GIR A +
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V ++PRAS EF ++ S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E EK ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F K
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTP-----EEQKETFVPIELGIPSKQPSNYFCK 128
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LDYT PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKR 188
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+R + L +GIR A +
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V ++PRAS EF ++ S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 604 QVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HV 658
Q+ S KV+ +S VGR+LD+S SSY EL L MF IE D L +
Sbjct: 697 QINSSNQTKNFVKVY-KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQL 755
Query: 659 LYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
++ D I GD+P+ F+ + + IL
Sbjct: 756 VFVDKENDILLLGDDPWESFVNNVWYIKIL 785
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 146/391 (37%), Positives = 191/391 (48%), Gaps = 68/391 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
+LW ACAG +V++P VFYFPQGH E S N + +IP P I CRV +++
Sbjct: 23 ELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVVNIR 82
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LA+ ETDEVYA+I L P E D + S + + + SF K LT SD +
Sbjct: 83 LLAEKETDEVYAQITLYP----EAD-QSEPQSADPEPPERTRQTVHSFCKILTASDTSTH 137
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD + P Q + AKD+HG WKF+HI+RG PRRHLLTTGWSTF
Sbjct: 138 GGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRHLLTTGWSTF 197
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V K+LVA GD V +R +NG
Sbjct: 198 VTSKRLVA-----------GDAFVFLR------------------GDNGE---------- 218
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
LR + AR ++ +S S +S VL + A + + VVY
Sbjct: 219 ---LRVGVRRQARQQSLMPSSVISSHSMHLG-----------VLATASHAVRTQTYFVVY 264
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S +F + + ++ + GMRFKM FE E+S F GTI V P
Sbjct: 265 YKPRTS--QFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERR-FTGTIVGVGDMSP-Q 320
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR L++ WDEP +Q +RVSPW +E
Sbjct: 321 WSDSKWRSLKIQWDEPATIQRPERVSPWEIE 351
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR +DL+ L YE+L L +F I+ R +++ D + GD
Sbjct: 587 KVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTDDENDMMLVGD 646
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F K KR+ I
Sbjct: 647 DPWPEFCKMVKRIFI 661
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 142/217 (65%), Gaps = 8/217 (3%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
++++ +LWHACAG +V +P S V YFPQGH E S+ +PP +F RV +
Sbjct: 19 EAVNIELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADALPPHVFSRVVHVT 78
Query: 66 FLADSETDEVYAKIKLVPIPANE----IDFEDNNLSLNSVGSDSE----SEKPASFAKTL 117
+AD TDEVYA++ L+P+ E ++FE+ +S+ ++ P F KTL
Sbjct: 79 LMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTKIPHMFCKTL 138
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHL
Sbjct: 139 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRHIYRGQPRRHL 198
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
LTTGWS+FVN+KKLV+GD+++FLR DG+L +GIRRA
Sbjct: 199 LTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRA 235
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 143/221 (64%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E EK ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F K
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTP-----EEQKETFVPIELGIPSKQPSNYFCK 128
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQPKR 188
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+R + L +GIRRA +
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATR 229
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V ++PRAS EF ++ S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 560 LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFL 619
SSS G ++ S SG + S + ++ E Q++ S KV+
Sbjct: 687 FASSSSGGDAEAYPMSLGDSGFENSLYNSCMQDTTHELLHGVG-QISPSNQTKNFVKVY- 744
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEP 674
+S VGR+LD+S SSY EL L MF IE D L +++ D I GD+P
Sbjct: 745 KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDP 804
Query: 675 FSDFMKSAKRLTIL 688
+ F+ + + IL
Sbjct: 805 WESFVSNVWYIKIL 818
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 211 bits (538), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 142/221 (64%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E EK ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F K
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLTP-----EEQKETFVPIELGIPSKQPSNYFCK 128
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LDYT PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKR 188
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+R + L +GIR A +
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATR 229
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V ++PRAS EF ++ S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 321 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 363
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 604 QVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HV 658
Q+ S KV+ +S VGR+LD+S SSY EL L MF IE D L +
Sbjct: 691 QINPSTQTKNFVKVY-KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQL 749
Query: 659 LYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
++ D I GD+P+ F+ + + IL
Sbjct: 750 VFVDKENDILLLGDDPWESFVNNVWYIKIL 779
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 142/218 (65%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+ SI +LWHACAG +V++PP + V YFPQGH+E S+N P+ +P +
Sbjct: 4 KSSIKAELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLL 63
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + +L AD +TD+VYA+I L P+P+ F+ + L + + +S P F K LT
Sbjct: 64 CLLHTLTLHADPQTDQVYAQITLQPLPS----FDKDALLRSDLALESTKPPPDFFCKQLT 119
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LDY+ PP Q +VA+D+H +WKFRHIYRG P+RHLL
Sbjct: 120 ASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQPKRHLL 179
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 180 TTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANR 217
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + ++ H GMRF+M FETEDS MGT++ +
Sbjct: 249 PFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSG-TRRHMGTVTGIS 307
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 308 DLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIEPVT 347
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YEEL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 1003 VGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESDVLLLGDDPWEEF 1062
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1063 VNCVRCIKIL 1072
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 211 bits (538), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 144/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP +
Sbjct: 17 KKVLNSELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ N + +D L G S +++P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPL--NPQEQKDGYLP---AGLGSPNKQPTNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 88/170 (51%), Gaps = 14/170 (8%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP WPNS WR ++V WDE + RVS W VE ++ P ++ SPF + +L+ P
Sbjct: 322 LDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPLTTFP-MYPSPF---QLRLKRPW 377
Query: 420 QLDFP-FDGQFTMPLFSGNPLGPSSPLCCLS-DNTSAGIQGARHAQFGIS 467
P F+G + LG +S L L +N G+Q G++
Sbjct: 378 TPGLPSFNG------MRDDDLGMNSQLVWLQGNNGDRGMQSLNFPGMGVT 421
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 19/219 (8%)
Query: 503 HTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGK 562
HT S+N L +L++ LLFG I + I S +S + G
Sbjct: 652 HTTMSQNSISLPPFPGRECSLDQEGGTDPQSHLLFGVNIESSPLIMQSG----MSNLRGV 707
Query: 563 SSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESG-----LDTGHCKV 617
S G + S+ S + + I+ + SS + Q +E+ L+ KV
Sbjct: 708 GSDCGSTTMHFPSNYMSTAGSDFSINPAVTPSSCIHESGFLQSSENADNGDPLNRNFVKV 767
Query: 618 FLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRT 670
+ +S GR+LD++ SSY+EL LA MFG+E RS +++ D +
Sbjct: 768 Y-KSGSFGRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGW--QLVFVDRENDVLLL 824
Query: 671 GDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKN 709
GD+P+ +F+ S + IL +G+ + +++ N
Sbjct: 825 GDDPWPEFVNSVWCIKILSPQEVQQMGKRGLELLKSVPN 863
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 201/417 (48%), Gaps = 70/417 (16%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLKF 66
LW CAG +V +P + VFYFPQGH E S N + RIP L I CRV ++
Sbjct: 25 LWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVVNVHL 84
Query: 67 LADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGG 126
LA+ ETDEVYA+I LVP +N+ D ++ + ++ SF+K LT SD + G
Sbjct: 85 LAEQETDEVYAQITLVP-ESNQ----DEPMNPDPCTAEPPRAPVHSFSKVLTASDTSTHG 139
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GFSV R A P LD + P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTFV
Sbjct: 140 GFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFV 199
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFS 246
K+LVA GD V +R +NG
Sbjct: 200 TSKRLVA-----------GDTFVFLR------------------GDNGE----------- 219
Query: 247 CFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYY 306
LR ++AR + +S S S VL + A + + VVYY
Sbjct: 220 --LRVGVRRLARQASSMPSSVISSQSMHLG-----------VLATASHAVATQTLFVVYY 266
Query: 307 -PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI-SWFMGTISSVQVADPIS 364
PR S +F + + AM + GMR KM FE +DS+ F GTI V+ P
Sbjct: 267 KPRTS--QFIISVNKYLEAMN-RFSVGMRLKMRFEGDDSAETDKRFSGTIVGVEDISP-H 322
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQ 420
W NS WR L+V WDEP + RVSPW +E V++ + P K+ R P +
Sbjct: 323 WVNSKWRSLKVQWDEPAAVPRPDRVSPWEIEPFVASASTPSVQPTMVKTKRPRPPSE 379
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGR 626
GH V +S +Q++S +++ S + +R+ KV ++ VGR
Sbjct: 548 GHLSDVPMASSKERKQEQQQVSPKETQSKQICRSRT-------------KVQMQGVAVGR 594
Query: 627 TLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKRTGDEPFSDFMKS 681
+DL++L Y++L L MF I+ L H +++ D G + GD+P+ +F
Sbjct: 595 AVDLTMLDGYDQLINELEEMFDIK--GQLQHRNKWEIVFTDDEGDMMLVGDDPWPEFCNM 652
Query: 682 AKRLTI 687
+R+ I
Sbjct: 653 VRRIFI 658
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 144/221 (65%), Gaps = 12/221 (5%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPL 56
E K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP
Sbjct: 23 EEHKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEIESQIPNYPNLPPQ 82
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAK 115
+ C++ ++ AD ETDEVYA++ L P+ N + +D L +G+ +++P + F K
Sbjct: 83 LICQLHNVTMNADPETDEVYAQMTLQPL--NPQELKDPYLPAE-LGT--ANKQPTNYFCK 137
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q + AKD+HG WKFRHI+RG P+R
Sbjct: 138 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKR 197
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 198 HLLTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRATR 238
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 83/168 (49%), Gaps = 13/168 (7%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 271 FTIFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 329
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
D + WPNS WR ++V WDE + RVS W +E ++ P ++ +PF P R K P
Sbjct: 330 LDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPTPF-PLRLKRPWPT 387
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
L L G +S L L D ++ G Q G+S
Sbjct: 388 GLPS---------LHGGKDDDLTSSLMWLRDGSNPGFQSLNFGGVGMS 426
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL R L +FG+E D L +++ D +
Sbjct: 778 VKVY-KSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLL 836
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 837 VGDDPWQEFVNSVFCIKILSPQEVQQMGK 865
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+K+++P+LW ACAG +V +P + V YFPQGH+E S+ P+ +P +
Sbjct: 13 KKNLNPELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAKLI 72
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD ETDEVYA++ L P+P+ F+ L + + + +P F KTLT
Sbjct: 73 CLLHNVTLHADPETDEVYAQMTLQPVPS----FDKEALLRSDLSMKANKPQPEFFCKTLT 128
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LDY+ PP Q +VA+D+H IW FRH+YRG P+RHLL
Sbjct: 129 ASDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLL 188
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS V+ K+L AGDS++F+R + +GIR+A +
Sbjct: 189 TTGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANR 226
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRA EF + A KA GMRF+M FETE+S +MGTI+ +
Sbjct: 258 PFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESG-TRRYMGTITGIS 316
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQV WDE + + RVS W +E ++ +I SPF +++ P
Sbjct: 317 DLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITAPFLICSSPFFSSKR----P 372
Query: 419 QQLDFP------FDGQF--TMPLFSGNPLGPSSP 444
+Q P DG F TMP G+ G + P
Sbjct: 373 RQPGMPDGDYSDMDGMFKRTMPWL-GDDFGMADP 405
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YEEL LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 989 VGRSIDIARYSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEF 1048
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1049 VSCVRCIKIL 1058
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 146/402 (36%), Positives = 190/402 (47%), Gaps = 77/402 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW CAG +V +P V+YFPQGH E S N + +IP I C V ++
Sbjct: 25 ELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLFNLPSKILCSVVHIR 84
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS----FAKTLTQSD 121
LA+ ETDEVYA+I L P + + S + E P + F K LT SD
Sbjct: 85 LLAEQETDEVYAQITLHP---------EADQCEPSSPDPCKPEAPKATVHWFCKILTASD 135
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD P Q ++AKD+HG WKF+HI+RG PRRHLLTTG
Sbjct: 136 TSTHGGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRHLLTTG 195
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFV K+LVAGD+ VFLR +G+L G+RR + ++ PSS +S
Sbjct: 196 WSTFVTSKRLVAGDAFVFLRGDNGELRAGVRRLAR---QQSQIPSSVISSQ--------- 243
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+M+L VL + A K
Sbjct: 244 -------------------SMHLG----------------------VLATASHALMTKTL 262
Query: 302 EVVY-YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
VVY PR S +F + S A + + G RF+M FE ++S F GTI V
Sbjct: 263 FVVYSKPRTS--QFIIGLSKYLEATKTKFSLGTRFRMRFEGDESPERR-FTGTIVEVGDL 319
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMP 401
P W S WR L+V WDE +Q RVSPW +E V++ P
Sbjct: 320 SP-QWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAP 360
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/383 (37%), Positives = 188/383 (49%), Gaps = 78/383 (20%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSL---------NSVGS 103
+PP +FCRV + AD TDEVYA++ L+ +D E+ + + G
Sbjct: 32 VPPHVFCRVVDVNLQADPATDEVYAQVSLL------VDNEEAKRRMRQGESEEACDGDGE 85
Query: 104 DSESEK-----PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDV 158
D+ + K P F KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+
Sbjct: 86 DTGAAKRRARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDL 145
Query: 159 HGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGI 218
HG W+FRHIYRG PRRHLLTTGWS FVN+KKLV+GD+++FLR +DG L +G+RRA +
Sbjct: 146 HGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQ-- 203
Query: 219 GGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRG 278
+PF N S S GN
Sbjct: 204 -----------------LKNVSPFPAL------------------FNQDSSLRSLGN--- 225
Query: 279 NGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMA 338
V AVA+ + F + Y PR EF V + + GMRFKM
Sbjct: 226 ---------VAHAVAMKSI---FHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMK 273
Query: 339 FETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
+E ED+S G I+ + +D + S W+ L V WD+ + + RVSPW +EL
Sbjct: 274 YENEDASE-RRSTGMITGSRESD-LKSHGSKWKCLVVRWDDDVECRRLNRVSPWEIELAG 331
Query: 399 NMPVIHLSPFSPARKKLR--LPQ 419
++ HLS SP K+L+ LPQ
Sbjct: 332 SVSGSHLS--SPHSKRLKPCLPQ 352
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 141/219 (64%), Gaps = 11/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ETDEVYA++ L P+ E + L + ++P + F KTL
Sbjct: 78 CQLHNVTMHADAETDEVYAQMTLQPLSPQE----QKEVYLLPAELGTPGKQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 232
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 6/119 (5%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VPRYMGTITGISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R LR P
Sbjct: 324 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLR--LRRP 378
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 598 FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE------- 650
F S V ++ TG +S GR+LD+S SSY+EL LA MFG+E
Sbjct: 745 FLQSSENVDQANTPTGTFVKVHKSGSFGRSLDISKFSSYDELISELARMFGLEGQLEDPK 804
Query: 651 --RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
RS +++ D + GD+P+ +F+ + + IL
Sbjct: 805 TQRSGW--QLVFVDRENDVLLLGDDPWQEFVNNVWYIKIL 842
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 135/215 (62%), Gaps = 10/215 (4%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +PP S V YFPQGH+E S+ + PS +P + C +
Sbjct: 32 INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYPNLPSKLICLL 91
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD ETDEVYA++ L+P+ + L L+ + + F KTLT SD
Sbjct: 92 HNVTLHADPETDEVYAQMTLLPV----TSYGKEALQLSELALKQPRPQTEFFCKTLTASD 147
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTTG
Sbjct: 148 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTG 207
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 208 WSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 242
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF V + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 274 PFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 332
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 333 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 372
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S + Y+EL LA MF + ER + ++Y+D I GD+P+ +F
Sbjct: 1021 VGRSIDISQFNGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEF 1080
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1081 VNCVKCIRIL 1090
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 135/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ N L + +G + F KTLT S
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPV----NKYDRNALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+ AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSTKRFFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 300 PFEVVYYPRASTP-EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PR + P EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P
Sbjct: 321 DLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRP 373
Query: 419 QQLDFPFDGQFTMP 432
+ F GQ MP
Sbjct: 374 R-----FSGQPGMP 382
Score = 42.4 bits (98), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 1049 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 1106
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1107 EFVNCVQSIKIL 1118
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + L + +G + F KTLT S
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPV----NKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRA+ EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P+
Sbjct: 321 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 373
Query: 420 QLDFPFDGQFTMP 432
F GQ MP
Sbjct: 374 -----FSGQPGMP 381
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 1048 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 1105
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1106 EFVNCVQSIKIL 1117
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + L + +G + F KTLT S
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPV----NKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 300 PFEVVYYPRASTP-EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PR + P EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRP 373
Query: 419 QQLDFPFDGQFTMP 432
+ F GQ MP
Sbjct: 374 R-----FSGQPGMP 382
Score = 42.4 bits (98), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 1049 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 1106
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1107 EFVNCVQSIKIL 1118
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + L + +G + F KTLT S
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPV----NKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRA+ EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P+
Sbjct: 321 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 373
Query: 420 QLDFPFDGQFTMP 432
F GQ MP
Sbjct: 374 -----FSGQPGMP 381
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 1048 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 1105
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1106 EFVNCVQSIKIL 1117
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP S V YFPQGH+E S+ + PS +P + C
Sbjct: 8 AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 67
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 68 LHNVTLHADPETDEVYAQMTLQPV----TSYGKEALQLSELALKQARPQTEFFCKTLTAS 123
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 124 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTT 183
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 184 GWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 219
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 251 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 309
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 310 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 349
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S S Y+EL LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1000 VGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEF 1059
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1060 VGCVKCIRIL 1069
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + L + +G + F KTLT S
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPV----NKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 300 PFEVVYYPRASTP-EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PR + P EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRP 373
Query: 419 QQLDFPFDGQFTMP 432
+ F GQ MP
Sbjct: 374 R-----FSGQPGMP 382
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 1049 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 1106
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1107 EFVNCVQSIKIL 1118
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + L + +G + F KTLT S
Sbjct: 79 LHNVTLNADPETDEVYAQMTLQPV----NKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 300 PFEVVYYPRASTP-EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PR + P EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGIS 320
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF 408
DP+ W NS WR LQ+ WDE RVS W +E V L+PF
Sbjct: 321 DLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPF 363
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGD 672
E VGR++D++ Y+EL LA MFGIE SD ++Y D I GD
Sbjct: 1048 ERGSVGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHETDILLVGD 1105
Query: 673 EPFSDFMKSAKRLTIL 688
+P+ +F+ + L IL
Sbjct: 1106 DPWEEFVNFVQSLKIL 1121
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P + C
Sbjct: 19 RNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICM 78
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ + L + +G + F KTLT S
Sbjct: 79 LQNVTLNADPETDEVYAQMTLQPV----NKYDRDALLASDMGLKLNRQPNEFFCKTLTAS 134
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG P+RHLLTT
Sbjct: 135 DTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTT 194
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 195 GWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANR 230
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRA+ EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 262 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W +S WR LQ+ WDE RVS W +E V L+PF P+
Sbjct: 321 LDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 373
Query: 420 QLDFPFDGQFTMP 432
F GQ MP
Sbjct: 374 -----FAGQPGMP 381
Score = 42.4 bits (98), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 984 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 1041
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1042 EFVNCVQSIKIL 1053
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP S V YFPQGH+E S+ + PS +P + C
Sbjct: 46 AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 105
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 106 LHNVTLHADPETDEVYAQMTLQPV----TSYGKEALQLSELALKQARPQTEFFCKTLTAS 161
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTT 221
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 222 GWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 257
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 289 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 347
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 348 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 387
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S S Y+EL LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1038 VGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEF 1097
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1098 VGCVKCIRIL 1107
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 203/694 (29%), Positives = 286/694 (41%), Gaps = 146/694 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LW AG +V +P V+YFPQGH E S ++ +PP I CRV +++
Sbjct: 4 ELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLFDLPPKILCRVMNVR 63
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A+ +TDEVYA+I L+P D +S + + + K SF K LT SD +
Sbjct: 64 LQAEKDTDEVYAQIMLMPEGTV-----DEPMSPDPSPPELQKPKFHSFTKVLTASDTSTH 118
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD T P Q +VA+DVHG WKF+HI+RG PRRHLLTTGWSTF
Sbjct: 119 GGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIFRGQPRRHLLTTGWSTF 178
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V KKLVA GD V +R NG G
Sbjct: 179 VTSKKLVA-----------GDTFVFLR------------------GENGELRVG------ 203
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
R N +S S S ++ G VL A + VY
Sbjct: 204 -----------VRRANRQQSSMPSSVISSHSMHLG-------VLATACHATQTRSMFTVY 245
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S +F + AM + GMRFKM FE +DS F GT+ VQ P
Sbjct: 246 YKPRTS--QFILSLHKYLEAMNSKFSVGMRFKMRFEGDDSPERR-FSGTVVGVQDCSP-H 301
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
W +S WR L V WDEP +VSPW + PF+ + +PQ ++
Sbjct: 302 WKDSKWRSLIVNWDEPASFTRPDKVSPW-----------EMEPFAASEN---VPQSVN-- 345
Query: 425 FDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARH----AQFGISSSDFHVNNKLQSG 480
+ ARH + G+ SS+F + QS
Sbjct: 346 --------------------------------KRARHVNEISALGVPSSNFWSSALTQSH 373
Query: 481 LFLSSL---QRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
F S QR P + D+ S N +K LF
Sbjct: 374 EFAQSCITSQRNPPQNSDWPVSPYSTLNGQMVFPVE----------QKKPETTTASCRLF 423
Query: 538 GQPIRTEQQISHSCSDDVVSQV-LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSE 596
G + + +H + + + K + D ++D S+ S + E++ ++S E
Sbjct: 424 GIDLMSSSLPAHEEKTAPMRPINITKPTLDSNAD---PKSEISKLSEEKKQEPAQASPKE 480
Query: 597 FFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSD 653
+S Q+ S T KV ++ VGR +DL++++ Y EL L +F IE +S
Sbjct: 481 V---QSKQINSSRSRT---KVQMQGVPVGRAVDLTLINGYVELIDDLEKLFDIEGELKSR 534
Query: 654 MLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
+++ D G + GD+P+ +F KR+ I
Sbjct: 535 NQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 568
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP S V YFPQGH+E S+ + PS +P + C
Sbjct: 23 AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 82
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 83 LHNVTLHADPETDEVYAQMTLQPV----TSYGKEALQLSELALKQARPQTEFFCKTLTAS 138
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 139 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTT 198
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 199 GWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 234
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 266 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 324
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 325 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 364
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S S Y+EL LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1015 VGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEF 1074
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1075 VGCVKCIRIL 1084
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP S V YFPQGH+E S+ + PS +P + C
Sbjct: 23 AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 82
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 83 LHNVTLHADPETDEVYAQMTLQPV----TSYGKEALQLSELALKQARPQTEFFCKTLTAS 138
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 139 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTT 198
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 199 GWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 234
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 266 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 324
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 325 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 364
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S S Y+EL LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1014 VGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEF 1073
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1074 VGCVKCIRIL 1083
>gi|110737002|dbj|BAF00456.1| hypothetical protein [Arabidopsis thaliana]
Length = 212
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/248 (48%), Positives = 154/248 (62%), Gaps = 40/248 (16%)
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI---KKHQFLLF 537
+FLSS F P + + +S N+SC LTMGN +K +++ K HQF+LF
Sbjct: 1 MFLSS---FNPRHHHYQA---RDSENSNNISCSLTMGNPAMVQDKKKSVGSVKTHQFVLF 54
Query: 538 GQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEF 597
GQPI TEQQ+ + + L + + + A
Sbjct: 55 GQPILTEQQVMNR------KRFLEEEAEAEEEKGLVARG--------------------L 88
Query: 598 FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIER-SDMLS 656
WN S Q GL+TGHCK+F+ESEDVGRTLDLSV+ SY+ELYR+LA MF IE SD+L+
Sbjct: 89 TWNYSLQ----GLETGHCKIFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEEGSDLLT 144
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNK 716
HV+Y+DA+G IKR GDEPFSDFMK+ KRLTI M G D+V +TWITG+RT +NG+DAS K
Sbjct: 145 HVVYRDANGVIKRIGDEPFSDFMKATKRLTIKMDIGGDNVRKTWITGIRTGENGIDASTK 204
Query: 717 TGPLSIFA 724
TGPLSIFA
Sbjct: 205 TGPLSIFA 212
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 158/444 (35%), Positives = 204/444 (45%), Gaps = 83/444 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFP+GH E S++ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVINI 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ ETDEVYA+I L+P E+D + S ++ + E SF KTLT SD +
Sbjct: 81 QRRAEPETDEVYAQITLLP----ELD-QSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+H W FRHI+RG PRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R G NE G
Sbjct: 196 FVSSKKLVA-----------GDAFIFLR-------GENEELRVG---------------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
+ R+ N S SS + M + +A AA +G
Sbjct: 222 -----------VRRHMRQQTNIPSSVISSHS-----------MHIGVLATAAHAITTGTI 259
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E++ F GTI VQ
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKR-FSGTIVGVQEN 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
W +S WR L+V WDEP + +RVSPW +E + P P R K P
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPG 378
Query: 421 LDFPFDGQFTMPLFSGNPLGPSSP 444
L P G P GP +P
Sbjct: 379 LPSPATG----------PSGPVTP 392
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---- 656
RS Q ++S KV ++ VGR +DL+ YE+L+++L MF I+ + S
Sbjct: 531 RSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKW 590
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+++F +++ I
Sbjct: 591 QVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP S V YFPQGH+E S+ + PS +P + C
Sbjct: 46 AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 105
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 106 LHNVTLHADPETDEVYAQMTLQPV----TSYGKEALQLSELALKQARPQTEFFCKTLTAS 161
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 162 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTT 221
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 222 GWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANR 257
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 289 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 347
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 348 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 387
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S S Y+EL LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 868 VGRSIDMSQFSGYDELKHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEF 927
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 928 VGCVKCIRIL 937
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ LWHACAG +VQ+PP S V YFPQGH+E S+ + P+ +P + C
Sbjct: 38 AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 98 LHNITLHADLETDEVYARMTLQPV----TSYGKEALQLSELALKQARPQNEFFCKTLTAS 153
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 154 DTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTT 213
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 214 GWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 249
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + L GMRF+M FETE+ +MGTI+ +
Sbjct: 281 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG-TRRYMGTITGIN 339
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 340 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 379
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S + YEEL + LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1053 VGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDDILLLGDDPWEEF 1112
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1113 VNCVKCIRIL 1122
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 200/427 (46%), Gaps = 73/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFP+GH E S++ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVINI 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ ETDEVYA+I L+P E+D ++ S ++ + E SF KTLT SD +
Sbjct: 81 QRRAEPETDEVYAQITLLP----ELD-QNEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+H W FRHI+RG PRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R G NE G
Sbjct: 196 FVSSKKLVA-----------GDAFIFLR-------GENEELRVG---------------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
+ R+ N S SS + M + +A AA +G
Sbjct: 222 -----------VRRHMRQQTNIPSSVISSHS-----------MHIGVLATAAHAITTGTI 259
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E++ F GTI VQ
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKR-FSGTIVGVQEN 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
W +S WR L+V WDEP + +RVSPW +E + P P R K P
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPG 378
Query: 421 LDFPFDG 427
L P G
Sbjct: 379 LPSPTTG 385
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLS 656
RS Q ++S KV ++ VGR +DL+ YE+L+++L MF I+ +S
Sbjct: 531 RSPQESQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFEIKGELLKSTKKW 590
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+++F +++ I
Sbjct: 591 QVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ LWHACAG +VQ+PP S V YFPQGH+E S+ + P+ +P + C
Sbjct: 38 AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 98 LHNITLHADLETDEVYARMTLQPV----TSYGKEALQLSELALKQARPQNEFFCKTLTAS 153
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 154 DTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTT 213
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 214 GWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 249
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + L GMRF+M FETE+ +MGTI+ +
Sbjct: 281 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG-TRRYMGTITGIN 339
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 340 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 379
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S + YEEL + LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1053 VGRSIDISQYAGYEELKQALARMFSIEGQLEERQRIGWKLVYRDHEDDILLLGDDPWEEF 1112
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1113 VNCVKCIRIL 1122
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 199/427 (46%), Gaps = 73/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFP+GH E S++ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVINI 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ ETDEVYA+I L+P E+D + S ++ + E SF KTLT SD +
Sbjct: 81 QRRAEPETDEVYAQITLLP----ELD-QSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+H W FRHI+RG PRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R G NE G
Sbjct: 196 FVSSKKLVA-----------GDAFIFLR-------GENEELRVG---------------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
+ R+ N S SS + M + +A AA +G
Sbjct: 222 -----------VRRHMRQQTNIPSSVISSHS-----------MHIGVLATAAHAITTGTI 259
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E++ F GTI VQ
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKR-FSGTIVGVQEN 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
W +S WR L+V WDEP + +RVSPW +E + P P R K P
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPG 378
Query: 421 LDFPFDG 427
L P G
Sbjct: 379 LPSPATG 385
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---- 656
RS Q ++S KV ++ VGR +DL+ YE+L+++L MF I+ + S
Sbjct: 526 RSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKW 585
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+++F +++ I
Sbjct: 586 QVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 616
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 199/427 (46%), Gaps = 73/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFP+GH E S++ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVINI 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ ETDEVYA+I L+P E+D + S ++ + E SF KTLT SD +
Sbjct: 81 QRRAEPETDEVYAQITLLP----ELD-QSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+H W FRHI+RG PRRHLLTTGWS
Sbjct: 136 QGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R G NE G
Sbjct: 196 FVSSKKLVA-----------GDAFIFLR-------GENEELRVG---------------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
+ R+ N S SS + M + +A AA +G
Sbjct: 222 -----------VRRHMRQQTNIPSSVISSHS-----------MHIGVLATAAHAITTGTI 259
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E++ F GTI VQ
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKR-FSGTIVGVQEN 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
W +S WR L+V WDEP + +RVSPW +E + P P R K P
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPG 378
Query: 421 LDFPFDG 427
L P G
Sbjct: 379 LPSPATG 385
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---- 656
RS Q ++S KV ++ VGR +DL+ YE+L+++L MF I+ + S
Sbjct: 528 RSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKW 587
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+++F +++ I
Sbjct: 588 QVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 618
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 191/402 (47%), Gaps = 85/402 (21%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+ K+I+ +LW+ACAG +V +P + S V+YFPQGH+E S ++S+IP +
Sbjct: 13 IRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPSQL 72
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTL 117
C+V ++ AD +TDE+YA++ L P+ + F + L SE F KTL
Sbjct: 73 LCQVHNVTLHADKDTDEIYAQMSLQPVNTEKDVFPIPDFGLRPSKHPSEF-----FCKTL 127
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q +V +D+H W FRHIYRG P+RHL
Sbjct: 128 TASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQPKRHL 187
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
LTTGWS FV K+L AGDS++
Sbjct: 188 LTTGWSLFVGSKRLKAGDSVL--------------------------------------- 208
Query: 238 TGNPFGGFSCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
F+R+E++++ R N + S S ++ G ++ A
Sbjct: 209 ----------FIRDEKSQLMVGVRRANRQQTTLPSSVLSADSMHIG------VLAAAAHA 252
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAV-KAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A+ PF + Y PRA +F + KA GMRF M FETE+S + +MGT
Sbjct: 253 TANRSPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFETEESGK-RRYMGT 311
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
I V ++D V WDEP RVS W +E
Sbjct: 312 I--VGISD------------LVEWDEPGCSDKQNRVSSWEIE 339
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG ++ +P S V YFPQGH E + + +PP +FCR+ +K A++
Sbjct: 51 ELWHACAGPLISLPKRGSLVLYFPQGHLEQQAPGFS-AAIYGLPPHVFCRILDVKLHAET 109
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSV-GSDSE-------SEKPASFAKTLTQSDA 122
+TDEVYA++ L+P + +I+ + ++ V G D E S P F KTLT SD
Sbjct: 110 DTDEVYAQVSLLP-ESEDIERKLREGVIDVVDGGDQEDYEVVKRSNTPHMFCKTLTASDT 168
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY+ P Q ++A+D+HG W+FRHIYRG PRRHLLTTGW
Sbjct: 169 STHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGW 228
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
S FVN+KKLV+GD+++FLR DG L +G+RRA +
Sbjct: 229 SGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQ 262
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+G I+ + DPI WP S WR L V WD+ + ++ +RVSPW +E
Sbjct: 304 LGIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWEIE 348
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 143/218 (65%), Gaps = 12/218 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
+ +D +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP + C
Sbjct: 18 RVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ ++ AD+ETDEVYA++ L P+ + ++ + + S++P + F KTLT
Sbjct: 78 QLHNMTMHADAETDEVYAQMTLQPL-----NPQEQKEAYLPAELGTPSKQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+HG WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 17/154 (11%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR ++V WDE RVS W +E ++ P ++ SPF P R K P
Sbjct: 322 LDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 379
Query: 420 QLDFPFDGQFTMPLFSG---NPLGPSSPLCCLSD 450
L P F G + GP+SPL L D
Sbjct: 380 GL----------PSFHGMKDDDFGPNSPLLWLRD 403
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+K+I+ +LW ACAG ++ +P + V YFPQGH+E S+ P+ + +P I
Sbjct: 22 KKTINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIP 81
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD +TDEVYA++ L P+P+ F+ + L + + S +P F K LT
Sbjct: 82 CLLHNVTLHADPDTDEVYAQMTLQPVPS----FDTDALLRSDIFLRSSKPQPEFFCKQLT 137
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LDY+ PP Q +VA+D+H +W+FRHIYRG P+RHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPKRHLL 197
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS F+ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 198 TTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANR 235
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 6/128 (4%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + A+ H + GMRF+M FETEDS +MGTI V
Sbjct: 267 PFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSG-TRRYMGTIIGVS 325
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
D + W NS WR LQV WDE + RVS W +E V+ I PF + ++P
Sbjct: 326 DLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIEPVTTPYFICPPPFF----RSKIP 381
Query: 419 QQLDFPFD 426
+ L P D
Sbjct: 382 RLLGMPDD 389
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-RSDMLSHV----LYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YE+L + LA+ FGIE + + L + +Y D + GD+P+ +F
Sbjct: 998 VGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHENDVLLVGDDPWEEF 1057
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1058 VNCVRCIKIL 1067
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 154/427 (36%), Positives = 199/427 (46%), Gaps = 73/427 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFP+GH E S++ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVINI 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ A+ ETDEVYA+I L+P E+D + S ++ + E SF KTLT SD +
Sbjct: 81 QRRAEPETDEVYAQITLLP----ELD-QSEPTSPDAPVQEPEKCTVHSFCKTLTASDTST 135
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+H W FRHI+RG PRRHLLTTGWS
Sbjct: 136 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSV 195
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R G NE G
Sbjct: 196 FVSSKKLVA-----------GDAFIFLR-------GENEELRVG---------------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
+ R+ N S SS + M + +A AA +G
Sbjct: 222 -----------VRRHMRQQTNIPSSVISSHS-----------MHIGVLATAAHAITTGTI 259
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF V + A GMRFKM FE E++ F GTI VQ
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPEKR-FSGTIVGVQEN 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQ 420
W +S WR L+V WDEP + +RVSPW +E + P P R K P
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSSQPQPPQRNKRPRPPG 378
Query: 421 LDFPFDG 427
L P G
Sbjct: 379 LPSPATG 385
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---- 656
RS Q ++S KV ++ VGR +DL+ YE+L+++L MF I+ + S
Sbjct: 528 RSPQESQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKW 587
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + GD+P+++F +++ I
Sbjct: 588 QVVYTDDEDDMMMVGDDPWNEFCGMVRKIFI 618
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 143/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 19 QRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ET+EVYA++ L P+ E+ + + S++P + F KTL
Sbjct: 79 CQLHNVTMHADAETEEVYAQMTLQPLSP-----EEQKEPFLPIELGAGSKQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PPVQ +VA+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDSI+F+ + L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANR 232
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D WPNS WR ++V WDE RVS W +E ++ P+
Sbjct: 324 LDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPM 366
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+KSI+P+LW ACAG +V +P + V YFPQGH+E S+ P+ +P +
Sbjct: 20 KKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKLL 79
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD ETDEVY ++ L P+ + F+ + L + + S + F KTLT
Sbjct: 80 CLLHNVTLHADPETDEVYVQMTLQPVSS----FDKDALLRSDLALKSNKPQTEFFCKTLT 135
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LD++ PP Q +VA+D+H +W FRHIYRG P+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPKRHLL 195
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 196 TTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANR 233
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KA GMRF+M FETE+S MGTI+ +
Sbjct: 265 PFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESG-TRRHMGTITGIS 323
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
D + W NS WR LQV WDE + RVS W +E V+
Sbjct: 324 DLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVT 363
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE + + ++Y D + GD+P+ +F
Sbjct: 1012 VGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKLVYTDHENDVLLVGDDPWEEF 1071
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1072 VNCVRCIKIL 1081
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 139/371 (37%), Positives = 184/371 (49%), Gaps = 67/371 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P + V+YFPQGH E S++ PS + +P I C+V ++
Sbjct: 25 ELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFN-LPSKILCKVVNV 83
Query: 65 KFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
A+S+TDEVYA+I L+P NE+ D L + SF KTLT SD +
Sbjct: 84 VLRAESDTDEVYAQITLLPESNQNEVTSPDPPLP------EPTRCNVHSFCKTLTASDTS 137
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 138 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPRRHLLTTGWS 197
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
FV+ KKLVAGD+ +FLR ++G+L VG+RR + + N PSS +S+
Sbjct: 198 VFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQL---NNMPSSVISSH----------- 243
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
+M+L ++ A ++G F V
Sbjct: 244 -----------------SMHLG---------------------VLATASHAISTGTLFSV 265
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
Y PR S F V + A GMRFKM FE E+ S F GTI +
Sbjct: 266 FYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVPERS-FSGTIVGLGDNASP 324
Query: 364 SWPNSPWRLLQ 374
W NS WR L+
Sbjct: 325 GWANSEWRSLK 335
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/219 (47%), Positives = 142/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +PPL S V YFPQGH+E S N P+ + P +
Sbjct: 21 KRVLNSELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQPQLI 80
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ A E + ++ +G S +P + F KTL
Sbjct: 81 CQLHNVTMHADVETDEVYAQMTLQPLNAQE---QKDSYLAAELGV--PSRQPTNYFCKTL 135
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 136 TASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHL 195
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 196 LTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHR 234
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAST EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 267 FTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 325
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP W NS WR ++V WDE RVS W +E ++ P ++ SPF P R K P
Sbjct: 326 LDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPS 383
Query: 420 QL 421
L
Sbjct: 384 GL 385
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 209 bits (532), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 153/412 (37%), Positives = 193/412 (46%), Gaps = 88/412 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW ACAG +V++P VFYFPQGH E + S N + +PP I CRV S+
Sbjct: 21 ELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSV 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
A+ ETDEVYA+I L P E E +L V E KPA SF K LT SD
Sbjct: 81 TLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPLV----EPAKPAVDSFVKILTASDT 133
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A P LD T P Q +VA+D+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 134 STHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 193
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
STFV K+L V G+ F
Sbjct: 194 STFVTSKRL---------------------------------------------VAGDAF 208
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
FLR E + R G L S + R+ VL + A +
Sbjct: 209 ----VFLRGETGDL-RVGVRRLAKQQSTMPASVISSQSMRLG---VLATASHAVTTTTIF 260
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQVA 360
VV+Y PR S +F + + AM+ + GMR++M FE E+S RI F GTI +
Sbjct: 261 VVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTI--IGSG 314
Query: 361 DPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
D S WP S WR LQ+ WDEP +Q +VSPW +E PFSP+
Sbjct: 315 DLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSPS 355
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIK 668
KV ++ VGR +DL++L SY+EL + L MF IE LS +++ D G
Sbjct: 492 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGE--LSPKDKWAIVFTDDEGDRM 549
Query: 669 RTGDEPFSDFMKSAKRLTI 687
GD+P+++F K AK+L I
Sbjct: 550 LVGDDPWNEFCKMAKKLFI 568
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 137/217 (63%), Gaps = 10/217 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFC 59
+ I+P+LW ACAG +V +P + V YFPQGH+E S+ P+ +P + C
Sbjct: 22 RHINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASMKRDVDAQIPNYPNLPSKLLC 81
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ ++ AD ETDEVYA++ L P+ + F+ L + + S +P F KTLT
Sbjct: 82 LLHNVTLHADPETDEVYAQMTLQPVSS----FDKEALLRSDLSLKSNKPQPEFFCKTLTA 137
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD++ P Q +VA+D+H +WKFRHIYRG P+RHLLT
Sbjct: 138 SDTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQELVARDLHENVWKFRHIYRGKPKRHLLT 197
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 198 TGWSLFVSGKRLFAGDSVLFIRDETQQLLLGIRRANR 234
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + + A+ H + GMRF+M FETE+S +MGTI+ +
Sbjct: 266 PFTVFYNPRASLSEFVIPLAKYYKAVYNHQISPGMRFRMMFETEESG-TRRYMGTITGIS 324
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 325 DIDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVT 364
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL + LA FGIE R + ++Y D + GD+P+ +F
Sbjct: 998 VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWKLVYVDHENDVLLVGDDPWEEF 1057
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1058 INCVRCIKIL 1067
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 145/218 (66%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 19 QRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ ++ AD+ET+EVYA++ L P+ E +D L + +G+ S+ + F KTLT
Sbjct: 79 CQLHNVTMHADAETEEVYAQMTLQPLSPEEQ--KDPFLPIE-LGAGSK-QPTNYFCKTLT 134
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PPVQ +VA+D+H WKFRHI+RG P+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDSI+F+ + L +GIRRA +
Sbjct: 195 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASR 232
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D WPNS WR ++V WDE RVS W +E ++ P+
Sbjct: 324 LDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPM 366
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 140/221 (63%), Gaps = 10/221 (4%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPP 55
+E +K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP
Sbjct: 15 EEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPP 74
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C++ + AD ETDEVYA++ L P+ E N+ L + + F K
Sbjct: 75 QLICQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDPYLPAEMGIMSKQPTNYFCK 130
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PPVQ ++A+D+H WKFRHI+RG P+R
Sbjct: 131 TLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIARDIHDVEWKFRHIFRGQPKR 190
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 191 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 231
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + + PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 264 FTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 322
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 323 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 365
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 713 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 769
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 770 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 800
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 156/412 (37%), Positives = 197/412 (47%), Gaps = 88/412 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW ACAG +V++P N VFYFPQGH E + S N + +PP I CRV S+
Sbjct: 21 ELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSV 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
A+ ETDEVYA+I L P E E +L V E KP SF K LT SD
Sbjct: 81 MLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPLV----EPAKPTVDSFVKILTASDT 133
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A P LD T P Q +VA+D+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 134 STHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 193
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
STFV K+LVA GD V +R
Sbjct: 194 STFVTSKRLVA-----------GDAFVFLR------------------------------ 212
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
G + LR ++A+ + S SS + R VL + A +
Sbjct: 213 -GQTGDLRVGVRRLAKQQS---TMPASVISSQSMRLG--------VLATASHAVTTTTIF 260
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQVA 360
VV+Y PR S +F + + AM+ + GMRF+M FE E+S RI F GTI V
Sbjct: 261 VVFYKPRIS--QFIISVNKYMVAMKNGFSLGMRFRMRFEGEESPERI--FTGTI--VGSG 314
Query: 361 DPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
D S WP S WR LQ+ WDEP + +VSPW +E PFSP+
Sbjct: 315 DLSSQWPASKWRSLQIQWDEPSSIPRPNKVSPWEIE-----------PFSPS 355
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV ++ VGR +DL++L SY+EL + L MF IE D + +++ D G + G
Sbjct: 493 KVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELSPKDKWT-IVFTDDEGDMMLVG 551
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F K AK+L I
Sbjct: 552 DDPWNEFCKMAKKLFI 567
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 145/223 (65%), Gaps = 13/223 (5%)
Query: 2 KEVEKSI-DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+E EK + D +LWHACAG +V +P + S V YFPQGH+E S N P+ +P
Sbjct: 13 QEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLP 72
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-F 113
P + C++ +L AD+ETDEVYA++ L P+ E + +G+ S++P + F
Sbjct: 73 PQLICQLHNLTMHADTETDEVYAQMTLQPLNPQE---QKGAYLPAELGT--PSKQPTNYF 127
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+HG WKFRHI+RG P
Sbjct: 128 CKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQP 187
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/171 (38%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
D I WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 322 LDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 379
Query: 420 QLDFPFDGQFTMPLFSG---NPLGPSSPLCCLSDNTSAGIQGARHAQFGIS 467
L PLF G + G +S L L D T G+ G+S
Sbjct: 380 GL----------PLFHGLKDDDFGINSSLMWLRD-TDRGLPSLNFQGIGVS 419
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S GR+LD++ +SY EL LA MFG+E RS +++ D +
Sbjct: 780 VKVY-KSGSFGRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGW--QLVFVDQENDV 836
Query: 668 KRTGDEPFSDFMKSAKRLTIL 688
GD P+ +F+ S + IL
Sbjct: 837 LLLGDGPWPEFVNSVGYIKIL 857
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 208 bits (530), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 142/220 (64%), Gaps = 12/220 (5%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD +TDEVYA++ L P+ + E + + ++G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKDTDEVYAQMTLQPV-----NSETDVFPIPTLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LLTTGWS FV K+L AGDS++F+R + L +G+RRA +
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATR 246
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S F + + A + GMRF M FETE+SS+ + GT+ + DP+ WPN
Sbjct: 285 RTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSK-RRYTGTVVGISDYDPMRWPN 343
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
S WR LQV WDE + +RVS W +E N V S + R+ L
Sbjct: 344 SKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPSSTLNSKRQCL 391
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 134/215 (62%), Gaps = 10/215 (4%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
I+ +LWHACAG +V +PP S V YFPQGH+E S+ + P+ +P + C +
Sbjct: 42 INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICLL 101
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD ETDEVYA++ L P+ + L L+ + + F KTLT SD
Sbjct: 102 HNITLHADLETDEVYAQMTLQPV----TSYGKEALQLSELALKQSRPQNEFFCKTLTASD 157
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTTG
Sbjct: 158 TSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTG 217
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 218 WSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANR 252
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + L GMRF+M FETE+ +MGTI+ +
Sbjct: 284 PFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG-TRRYMGTITGIS 342
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 343 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVA 382
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+S + Y+EL LA MF I ER + ++Y+D I GD+P+ +F
Sbjct: 1026 VGRSIDISQYAGYDELKHALARMFSIEGQLEERQRIGWKLVYRDHEDDILLLGDDPWEEF 1085
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1086 VNCVKYIRIL 1095
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/221 (47%), Positives = 138/221 (62%), Gaps = 14/221 (6%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVS 62
I +LWHACAG + +P + V YFPQGH E V++ S IP P IFCRV+
Sbjct: 50 IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQG-AMVSYSSPLDIPKLDLSPQIFCRVA 108
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES-------EKPASFAK 115
++ LA+ ETDEVY ++ L+P+ + + +G D E + P F K
Sbjct: 109 NVHLLANKETDEVYTQVTLLPLQELSV-LNGEGKEVRELGGDEEKNGSSSVKKTPHMFCK 167
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE F LDY P Q ++AKD+HG WKFRHIYRG PRR
Sbjct: 168 TLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRR 227
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+QK LV+GD+++FLR ++G+L +GIRR+ +
Sbjct: 228 HLLTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSAR 268
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 208 bits (529), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/219 (45%), Positives = 140/219 (63%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVEGHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E+ + + S++P++ F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMVLQPLTQ-----EEQKDTFVPIELGIPSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDYT PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LV GDS++F+R + L +GIR A +
Sbjct: 192 LTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASR 230
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y+PR+S+ EF + +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGIGD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + R S W +E ++ P+
Sbjct: 322 LDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFPM 364
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 141/218 (64%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+KSI+ +LW ACAG ++ +P + V YFPQGH+E S+ P+ + +P I
Sbjct: 22 KKSINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIP 81
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD +TDEVYA++ L P+P+ F+ + L + + +P F K LT
Sbjct: 82 CLLHNVTLHADPDTDEVYAQMALRPVPS----FDTDALLRSDISLKLSKPQPEFFCKQLT 137
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LDY+ PVQ +VA+D+H +W+FRHIYRG P+RHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPKRHLL 197
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS F++ K+L+AGDS++F+R + L +GIRRA +
Sbjct: 198 TTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANR 235
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KA H GM F+M FETEDS +MGTI V
Sbjct: 267 PFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSG-TRRYMGTIIGVS 325
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
D + W NS WR LQV WDE RVS W +E V+ I PF +++ P
Sbjct: 326 DLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPVTTPYFICPPPFFRSKR----P 381
Query: 419 QQLDFPFD 426
+ L P D
Sbjct: 382 RLLGMPDD 389
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S YEEL + LA+ FGIE R + ++Y D + GD+P+ +F
Sbjct: 1012 VGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHENDVLLVGDDPWEEF 1071
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1072 VNCVRCIKIL 1081
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 161/448 (35%), Positives = 209/448 (46%), Gaps = 84/448 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V +P VFYFPQGH E S N + R+P I CRV +
Sbjct: 6 ELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVIHTQ 65
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LA+ +TDEVYA+I L+P +++I S +S S+ SF K LT SD +
Sbjct: 66 LLAEQDTDEVYAQITLIP-ESDQI----EPTSPDSSSSEPPRPTVHSFCKVLTASDTSTH 120
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD T P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 121 GGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 180
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V K+LVA GD V +R NG G
Sbjct: 181 VTSKRLVA-----------GDSFVFLR------------------GENGELRVG--VRRV 209
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
+C + + + +M+L VL + A S VVY
Sbjct: 210 ACQQSSMPSSVISSQSMHLG----------------------VLATASHAVSTLTLFVVY 247
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR S +F + + A+ ++ GMRFKM FE EDS F GTI V+ P
Sbjct: 248 YKPRTS--QFIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRR-FSGTIVGVEDFSP-H 303
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQLDF 423
W +S WR L+V WDEP + RVSPW +E V+++P P + K+ R P
Sbjct: 304 WNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPVTQKNKRPRPP----- 358
Query: 424 PFDGQFTMPLFSGNPLGPSSPLCCLSDN 451
F +P LG S+PL S N
Sbjct: 359 -----FEIPA-----LGYSTPLSSKSKN 376
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR +DL++L Y +L L +F I+ ++Y D G + GD
Sbjct: 454 KVQMQGIAVGRAVDLTMLKGYSQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGD 513
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F +R+ I
Sbjct: 514 DPWPEFCNMVRRIYI 528
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 135/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ P+ +P + C
Sbjct: 29 TINGELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLPSKLICL 88
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ S+ AD +TDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 89 LHSVILQADPDTDEVYAQMTLQPVNT----YAKEALQLSELALRQARPQMEFFCKTLTAS 144
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H IW FRHI+RG P+RHLLTT
Sbjct: 145 DTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFRGQPKRHLLTT 204
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ KKL AGDS++F+R + L +GIRRA +
Sbjct: 205 GWSLFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANR 240
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + AM + + GMRF+M ETE+ +MGTI+ +
Sbjct: 272 PFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCETEELG-TRRYMGTITGIS 330
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
DP+ W +S WR LQV WDE + RVS W +E ++ I PF ++ +L
Sbjct: 331 DLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIEPLAAPFFICPQPFFGVKRSRQL 389
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S Y EL + LA MFGIE R + ++Y D + GD+P+ +F
Sbjct: 1019 VGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDDVLLLGDDPWEEF 1078
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1079 VNCVRCIRIL 1088
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 192/412 (46%), Gaps = 88/412 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW ACAG +V++P VFYFPQGH E + S N + +PP I CRV S+
Sbjct: 21 ELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSV 80
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
A+ ETDEVYA+I L P E E +L V E KP SF K LT SD
Sbjct: 81 TLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPLV----EPAKPTVDSFVKILTASDT 133
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A P LD T P Q +VA+D+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 134 STHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 193
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
STFV K+L V G+ F
Sbjct: 194 STFVTSKRL---------------------------------------------VAGDAF 208
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
FLR E + R G L S + R+ VL + A +
Sbjct: 209 ----VFLRGETGDL-RVGVRRLAKQQSTMPASVISSQSMRLG---VLATASHAVTTTTIF 260
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQVA 360
VV+Y PR S +F + + AM+ + GMR++M FE E+S RI F GTI +
Sbjct: 261 VVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTI--IGSG 314
Query: 361 DPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
D S WP S WR LQ+ WDEP +Q +VSPW +E PFSP+
Sbjct: 315 DLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSPS 355
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIK 668
KV ++ VGR +DL++L SY+EL + L MF IE LS +++ D G
Sbjct: 492 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGE--LSPKDKWAIVFTDDEGDRM 549
Query: 669 RTGDEPFSDFMKSAKRLTI 687
GD+P+++F K AK+L I
Sbjct: 550 LVGDDPWNEFCKMAKKLFI 568
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 188/396 (47%), Gaps = 68/396 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH---SLGSVNFPSSSRI---PPLIFCRVSSL 64
+LW CAG +V +P V+YFPQGH E S V+ + + PP I C V ++
Sbjct: 12 ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNV 71
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA+I L+P+ E+D +S + + + K SF+K LT SD +
Sbjct: 72 SLQAEKDTDEVYAQITLIPV-GTEVD---EPMSPDPSPPELQRPKVHSFSKVLTASDTST 127
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +VA+DVHG WKF+HI+RG PRRHLLTTGWST
Sbjct: 128 HGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWST 187
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV K+LVA GD V +R NG G
Sbjct: 188 FVTSKRLVA-----------GDTFVFLR------------------GENGELRVG----- 213
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
R N+ +S S S ++ G VL A K +V
Sbjct: 214 ------------VRRANLQQSSMPSSVISSHSMHLG-------VLATARHATQTKTMFIV 254
Query: 305 YY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
YY PR S +F + + AM + GMRFKM FE EDS + GT+ V+ P
Sbjct: 255 YYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKDCSP- 310
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 399
W +S WR L+V WDEP + +VSPW +E N
Sbjct: 311 HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVN 346
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 560 LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFL 619
+ K + D HSD S+ S + E++ + S E Q +S KV +
Sbjct: 478 ISKPTMDSHSD---PKSEISKVSEEKKQEPAEGSPKEV------QSKQSSSTRSRTKVQM 528
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFS 676
+ VGR +DL+ L Y EL + +F I+ RS +++ D G + GD+P+
Sbjct: 529 QGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWP 588
Query: 677 DFMKSAKRLTI 687
+F KR+ I
Sbjct: 589 EFCNMVKRIFI 599
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 145/223 (65%), Gaps = 13/223 (5%)
Query: 2 KEVEKSI-DPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIP 54
+E EK + D +LWHACAG +V +P + S V YFPQGH+E S N P+ +P
Sbjct: 13 QEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLP 72
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-F 113
P + C++ ++ AD+ETDEVYA++ L P+ + ++ + + S++P + F
Sbjct: 73 PQLICQLHNVTMHADTETDEVYAQMTLQPL-----NPQEQKEAYLPAELGTPSKQPTNYF 127
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+HG WKFRHI+RG P
Sbjct: 128 CKILTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQP 187
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 188 KRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
D + WPNS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 322 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 379
Query: 420 QL 421
L
Sbjct: 380 GL 381
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/396 (36%), Positives = 188/396 (47%), Gaps = 68/396 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH---SLGSVNFPSSSRI---PPLIFCRVSSL 64
+LW CAG +V +P V+YFPQGH E S V+ + + PP I C V ++
Sbjct: 12 ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNV 71
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA+I L+P+ E+D +S + + + K SF+K LT SD +
Sbjct: 72 SLQAEKDTDEVYAQITLIPV-GTEVD---EPMSPDPSPPELQRPKVHSFSKVLTASDTST 127
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +VA+DVHG WKF+HI+RG PRRHLLTTGWST
Sbjct: 128 HGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWST 187
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV K+LVA GD V +R NG G
Sbjct: 188 FVTSKRLVA-----------GDTFVFLR------------------GENGELRVG----- 213
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
R N+ +S S S ++ G VL A K +V
Sbjct: 214 ------------VRRANLQQSSMPSSVISSHSMHLG-------VLATARHATQTKTMFIV 254
Query: 305 YY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
YY PR S +F + + AM + GMRFKM FE EDS + GT+ V+ P
Sbjct: 255 YYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVKDCSP- 310
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 399
W +S WR L+V WDEP + +VSPW +E N
Sbjct: 311 HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVN 346
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 560 LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFL 619
+ K + D HSD S+ S + E++ + S E Q +S KV +
Sbjct: 480 ISKPTMDSHSD---PKSEISKVSEEKKQEPAEGSPKEV------QSKQSSSTRSRTKVQM 530
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFS 676
+ VGR +DL+ L Y EL + +F I+ RS +++ D G + GD+P+
Sbjct: 531 QGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWP 590
Query: 677 DFMKSAKRLTI 687
+F KR+ I
Sbjct: 591 EFCNMVKRIFI 601
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 152/412 (36%), Positives = 192/412 (46%), Gaps = 88/412 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW ACAG +V++P VFYFPQGH E + S N + +PP I CRV S+
Sbjct: 42 ELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRVLSV 101
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
A+ ETDEVYA+I L P E E +L V E KP SF K LT SD
Sbjct: 102 TLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPLV----EPAKPTVDSFVKILTASDT 154
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A P LD T P Q +VA+D+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 155 STHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 214
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
STFV K+L V G+ F
Sbjct: 215 STFVTSKRL---------------------------------------------VAGDAF 229
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
FLR E + R G L S + R+ VL + A +
Sbjct: 230 ----VFLRGETGDL-RVGVRRLAKQQSTMPASVISSQSMRLG---VLATASHAVTTTTIF 281
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQVA 360
VV+Y PR S +F + + AM+ + GMR++M FE E+S RI F GTI +
Sbjct: 282 VVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPERI--FTGTI--IGSG 335
Query: 361 DPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
D S WP S WR LQ+ WDEP +Q +VSPW +E PFSP+
Sbjct: 336 DLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE-----------PFSPS 376
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIK 668
KV ++ VGR +DL++L SY+EL + L MF IE LS +++ D G
Sbjct: 513 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGE--LSPKDKWAIVFTDDEGDRM 570
Query: 669 RTGDEPFSDFMKSAKRLTI 687
GD+P+++F K AK+L I
Sbjct: 571 LVGDDPWNEFCKMAKKLFI 589
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 140/219 (63%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP +
Sbjct: 5 KKCLNSELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLI 64
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E L L S++P + F KTL
Sbjct: 65 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPLDLGM-----PSKQPTNYFCKTL 119
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 120 TASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 179
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 180 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 218
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 301 FEVVYYPRASTP-EFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
F V Y PR ++P EF + S VKA + GMRF+M FETE+SS + +MGTI+
Sbjct: 251 FTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESS-VRRYMGTITGTS 309
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E +++ P+
Sbjct: 310 DLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTSFPM 353
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE H +++ D +
Sbjct: 699 VKVY-KSGSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLL 757
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 758 LGDDPWELFVNNVWYIKIL 776
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 19 QRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ET EVYA++ L P+ E+ + + S +P + F KTL
Sbjct: 79 CQLHNVTMHADAETGEVYAQMTLQPLSP-----EEQKEPFLPIELGAGSNQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PPVQ +VA+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDSI+F+ + L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANR 232
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PR S EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRPS--EFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITCISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D WPNS WR ++V WDE RVS W +E + P+
Sbjct: 322 LDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPM 364
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 12 QRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 71
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ET EVYA++ L P+ E+ + + S +P + F KTL
Sbjct: 72 CQLHNVTMHADAETGEVYAQMTLQPLSP-----EEQKEPFLPIELGAGSNQPTNYFCKTL 126
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PPVQ +VA+D+H WKFRHI+RG P+RHL
Sbjct: 127 TASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHL 186
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDSI+F+ + L +GIRRA +
Sbjct: 187 LTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANR 225
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 258 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITCISD 316
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D WPNS WR ++V WDE RVS W +E + P+
Sbjct: 317 LDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPM 359
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIF 58
++ ++ +LWHACAG +V +PP+ S V YFPQGH+E S N + IP P +
Sbjct: 19 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ A E + + +G S +P + F KTL
Sbjct: 79 CQLHNVTMHADVETDEVYAQMTLQPLNAQE---QKDPYLPAELGV--PSRQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 232
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP W NS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 324 LDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 381
Query: 420 QL 421
L
Sbjct: 382 GL 383
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 606 TESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHV 658
TE+ KV+ +S GR+LD+S SSY EL LA MFG+E RS +
Sbjct: 746 TENPQSNTFVKVY-KSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGW--QL 802
Query: 659 LYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
++ D + GD+P+ +F+ S + IL +G+
Sbjct: 803 VFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMGK 842
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 19 QRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ET EVYA++ L P+ E+ + + S +P + F KTL
Sbjct: 79 CQLHNVTMHADAETGEVYAQMTLQPLSP-----EEQKEPFLPIELGAGSNQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PPVQ +VA+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDSI+F+ + L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANR 232
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITCISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D WPNS WR ++V WDE RVS W +E + P+
Sbjct: 324 LDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPM 366
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K+++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP +
Sbjct: 27 KKNLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPPQLI 86
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 87 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 142
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 143 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLL 202
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 203 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASR 240
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRA EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 273 FTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 331
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ W +S WR ++V WDE + RVS W +E ++ P+
Sbjct: 332 ADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 374
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 735 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGW--QLVFVDRENDV 791
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 792 LLLGDDPWESFVNSVWYIKILSPEDVHKLGK 822
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 19 QRCLNSELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD+ET EVYA++ L P+ E+ + + S +P + F KTL
Sbjct: 79 CQLHNVTMHADAETGEVYAQMTLQPLSP-----EEQKEPFLPIELGAGSNQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PPVQ +VA+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDSI+F+ + L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANR 232
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITCISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D WPNS WR ++V WDE RVS W +E + P+
Sbjct: 324 LDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPM 366
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
++ +LW+ACAG +V +PP S V YFPQGH+E S+ PS +P + C +
Sbjct: 24 VNQELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICIL 83
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+ LAD +TDEVYA++ L P+ +N + L + + + F KTLT SD
Sbjct: 84 RSVTMLADPDTDEVYARMTLQPV-SNVTHCDKETLLASDLALKQTRPQTEFFCKTLTASD 142
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP LD++ PP Q + A+D+H IW FRHIYRG P+RHLLTTG
Sbjct: 143 TSTHGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTG 202
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS FV+ K+L+AGDS++F+R L +GIRRA +
Sbjct: 203 WSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANR 237
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + + + A+ + L GMRF+M FETE+S+ +MGTI+ +
Sbjct: 270 FTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESA-TRRYMGTITGISD 328
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
DP+ W NS WR +QV WDE + RVS W VE V I+ SP A++
Sbjct: 329 MDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIAPFFIYPSPLFTAKR 382
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 988 VGRSIDINRYSGYDELKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKDVLLVGDDPWEDF 1047
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1048 VNCVRCIRIL 1057
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIF 58
++ ++ +LWHACAG +V +PP+ S V YFPQGH+E S N + IP P +
Sbjct: 17 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ A E + + +G S +P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLNAQE---QKDPYLPAELGV--PSRQPTNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 230
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP W NS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 322 LDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 379
Query: 420 QL 421
L
Sbjct: 380 GL 381
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S GR+LD+S SSY EL LA MFG+E RS +++ D +
Sbjct: 797 VKVY-KSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGW--QLVFVDRENDV 853
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 854 LLLGDDPWPEFVSSVWCIKILSPQEVQQMGK 884
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 141/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIF 58
++ ++ +LWHACAG +V +PP+ S V YFPQGH+E S N + IP P +
Sbjct: 19 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ A E + + +G S +P + F KTL
Sbjct: 79 CQLHNVTMHADVETDEVYAQMTLQPLNAQE---QKDPYLPAELGV--PSRQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANR 232
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGICD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP W NS WR ++V WDE + RVS W +E ++ P ++ SPF P R K P
Sbjct: 324 LDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF-PLRLKRPWPP 381
Query: 420 QL 421
L
Sbjct: 382 GL 383
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S GR+LD+S SSY EL LA MFG+E RS +++ D +
Sbjct: 799 VKVY-KSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGW--QLVFVDRENDV 855
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ S + IL +G+
Sbjct: 856 LLLGDDPWPEFVSSVWCIKILSPQEVQQMGK 886
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 187/394 (47%), Gaps = 74/394 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP-----PLIFCRVSSLK 65
QLW CAG +V +P VFYFPQGH E S N + IP P I CRV ++
Sbjct: 12 QLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHFNLPPKILCRVVHIQ 71
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LA+ ETDEVYA+I L+P E S + +++ + +F+K LT SD +
Sbjct: 72 LLAEQETDEVYARITLLPESNQE-----EPTSPDPSPPETQKQVFHTFSKILTASDTSTH 126
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P+LD T P Q +VA+D+HG WKF+HI+RG PRRHLLTTGWSTF
Sbjct: 127 GGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQPRRHLLTTGWSTF 186
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V KKLVA GD V +R NG
Sbjct: 187 VTSKKLVA-----------GDAFVFLR------------------GENGE---------- 207
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKPF 301
LR ++AR + +S S S M L +A A+ + F
Sbjct: 208 ---LRVGVRRVARQQSPMPSSVISSQS--------------MHLGVLATASHAFLTSTMF 250
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
V Y PR S +F + + A + GMRFKM FE EDS F GTI V
Sbjct: 251 VVYYKPRTS--QFIIGVNKYLEAENNKFSVGMRFKMRFEVEDSPERR-FSGTIVGVGDVS 307
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P W NS WR L+V WDEP ++ +RVS W +E
Sbjct: 308 P-GWWNSQWRSLKVQWDEPAIIPRPERVSSWEIE 340
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS---HVLYQDASGAIKRTGD 672
KV ++ VGR +DL+VL Y++L L MF I+ + + + D + GD
Sbjct: 560 KVQMQGIAVGRAVDLTVLKDYDDLIDELEKMFDIKGELQMQTKWAITFTDDGNDMMLVGD 619
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F KR+ I
Sbjct: 620 DPWPEFCTVVKRIFI 634
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 145/219 (66%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D LS+ +G S++P++ F KTL
Sbjct: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQ--KDTFLSME-LGI--PSKQPSNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 231
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 264 FTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 322
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 323 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 365
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE D L +++ D +
Sbjct: 718 VKVY-KSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLL 776
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 777 LGDDPWESFVNNVWYIKIL 795
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 143/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ A E +D L + +G S +P + F KTL
Sbjct: 78 CQLHNVTMHADVETDEVYAQMTLQPLTAQEQ--KDTFLPME-LGI--PSRQPTNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++AKD+H WKFRHI+RG P+RHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 231
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + + VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 264 FTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 322
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 323 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 365
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 594 SSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSD 653
SSE N S QV S KV+ ++ VGR+LD+S SSY+EL LA MFGIE
Sbjct: 693 SSELLHN-SGQVDPSNPTRTFVKVY-KTGSVGRSLDISRFSSYQELREELAQMFGIEGQL 750
Query: 654 MLS------HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTW------I 701
+ +++ D + GD+P+ F+ + + IL +G I
Sbjct: 751 VEDPRRSGWQLVFVDRENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLGEQAIESFNPI 810
Query: 702 TGMRTPKNGLDASNKTG 718
G R G +A N +G
Sbjct: 811 VGQRLTSGGNEAGNVSG 827
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 16/221 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P S V YFPQGH+E + N P+ +PP +
Sbjct: 16 KKCLNSELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLI 75
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEID--FEDNNLSLNSVGSDSESEKPAS-FAK 115
C++ ++ AD ETDEVYA++ L P+ E F +L + S++P + F K
Sbjct: 76 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQKETFLPMDLGM-------PSKQPTNYFCK 128
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKR 188
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 189 HLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 229
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 110/252 (43%), Gaps = 46/252 (18%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 262 FTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 320
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WPNS WR ++V WDE + RVS W +E ++ P+ P+ LRL +
Sbjct: 321 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKR 374
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSP-LCCLSDNTSAGIQGAR--HAQFGISSSDFHVNNK 476
P P SP L D S G+ R + G+ S +F N
Sbjct: 375 ------------------PWHPGSPSLLDSRDEASNGLMWLRGGSGEPGLPSLNFQAN-- 414
Query: 477 LQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLL 536
+ QR P D ++ +L G QNL + +++ QF+
Sbjct: 415 ----MLPWMQQRLDPTMLGND--------HNQRYQAMLAAG--MQNLGSGDPLRQ-QFMQ 459
Query: 537 FGQPIRTEQQIS 548
QP + QQ S
Sbjct: 460 LQQPFQYLQQSS 471
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE H +++ D +
Sbjct: 721 VKVY-KSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLL 779
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 780 LGDDPWELFVNNVWYIKIL 798
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 137/216 (63%), Gaps = 8/216 (3%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL---GSVNFPSSSRIPPLIFCRVSS 63
++ +LWHACAG+ V +P S V Y PQ H G V+ P+ R+PP + CRV
Sbjct: 16 AVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGVSAPAPPRVPPHVVCRVVD 75
Query: 64 LKFLADSETDEVYAKIKLVPIPA----NEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ AD+ TDEVYA++ LV + N D E + D E + + F KTLT
Sbjct: 76 VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
TTGWS+F+N+KKLV+GD+++FLR DG+L +G+RRA
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRA 231
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 287 MVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
++L AVA + + F + + PR EF V ++ H+ G RFK+ E ED++
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDAN 310
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH 404
S+ G I + DPI WP S W+ L + WD + RVSPW +E V S++ V H
Sbjct: 311 ERSF--GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 368
Query: 405 -LSPFSPARKKLRL-PQQLDFP-FDG 427
LS R KL P LD P DG
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDG 394
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRV 61
++ +LW+ACAG +V +PP S V YFPQGH+E S+ + ++IP + C +
Sbjct: 21 VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+ LAD +TDEVYA++ L P+ +N + L + + F KTLT SD
Sbjct: 81 RSVTMLADPDTDEVYARMTLQPV-SNVTHCDKETLLATELALKQTRPQTEFFCKTLTASD 139
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP LD++ PP Q + A+D+H IW FRHIYRG P+RHLLTTG
Sbjct: 140 TSTHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTG 199
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS FV+ K+L+AGDS++F+R L +GIRRA +
Sbjct: 200 WSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANR 234
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + + + A+ + L GMRF+M FETE+S+ +MGTI+ +
Sbjct: 267 FTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESA-TRRYMGTITGISD 325
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
DP+ W NS WR +QV WDE + RVS W VE V I+ SP A++
Sbjct: 326 MDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPLFTAKR 379
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 978 VGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDF 1037
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1038 VNCVRCIRIL 1047
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRV 61
++ +LW+ACAG +V +PP S V YFPQGH+E S+ + ++IP + C +
Sbjct: 21 VNEELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICIL 80
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+ LAD +TDEVYA++ L P+ +N + L + + F KTLT SD
Sbjct: 81 RSVTMLADPDTDEVYARMTLQPV-SNVTHCDKETLLATELALKQTRPQTEFFCKTLTASD 139
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP LD++ PP Q + A+D+H IW FRHIYRG P+RHLLTTG
Sbjct: 140 TSTHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLLTTG 199
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS FV+ K+L+AGDS++F+R L +GIRRA +
Sbjct: 200 WSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANR 234
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + + + A+ + L GMRF+M FETE+S+ +MGTI+ +
Sbjct: 267 FTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESA-TRRYMGTITGISD 325
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
DP+ W NS WR +QV WDE + RVS W VE V I+ SP A++
Sbjct: 326 MDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIAPFFIYPSPLFTAKR 379
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 979 VGRSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDF 1038
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1039 VNCVRCIRIL 1048
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 156/416 (37%), Positives = 198/416 (47%), Gaps = 85/416 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW CAG +V++P VFYFPQGH E + S N +S +PP I CRV +
Sbjct: 25 ELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDV 84
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ ETDEVYA+I L P E E +L VG + SF K LT SD +
Sbjct: 85 TLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPIVGPTKQEFH--SFVKILTASDTST 139
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +V +D+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVA GD V +R NG
Sbjct: 200 FVSSKRLVA-----------GDAFVFLR------------------GENGD--------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
LR ++AR+ + S S S M L +A A+ +
Sbjct: 222 ----LRVGVRRLARHQSTMPTSVISSQS--------------MHLGVLATASHAVRTTTI 263
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRISWFMGTISSVQV 359
F V Y PR S +F V + A++ + G RF+M FE E+S RI F GTI V
Sbjct: 264 FVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERI--FTGTI--VGS 317
Query: 360 ADPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS-PARK 413
D S WP S WR LQV WDEP +Q +VSPW +E P + SP S PA++
Sbjct: 318 GDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPISTPAQQ 368
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----VLYQDASGAIKRTG 671
KV ++ VGR +DL++L SY+EL L MF I+ +L+ V++ D G + G
Sbjct: 493 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ-GQLLARDKWIVVFTDDEGDMMLAG 551
Query: 672 DEPFSDFMKSAKRLTILMGSGSDSVGR 698
D+P+++F K AK++ I SD V +
Sbjct: 552 DDPWNEFCKMAKKIFIY---SSDEVKK 575
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/214 (49%), Positives = 136/214 (63%), Gaps = 15/214 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG + +P S V Y PQGH EH + + + +PP +FCRV + AD+
Sbjct: 39 ELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPGPAAVAAVPPHVFCRVVDVSLHADA 98
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK--------PASFAKTLTQSDA 122
TDEVYA++ LV D E+ + G D E E P F KTLT SD
Sbjct: 99 ATDEVYAQVSLV------ADNEEVERRMRE-GEDGEGEDAVKRPARIPHMFCKTLTASDT 151
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRHLLTTGW
Sbjct: 152 STHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGW 211
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
S F+N+KKLV+GD+++FLR +DG+L +G+RRA +
Sbjct: 212 SGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQ 245
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 151/407 (37%), Positives = 194/407 (47%), Gaps = 84/407 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS------RIPPLIFCRVSSL 64
+LW ACAG +V++P VFYFPQGH E + S N S ++PP I CRV S+
Sbjct: 24 ELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPDFKLPPKILCRVLSV 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGS---DSESEKPASFAKTLTQSD 121
A+ +TDEVYA+I L P E++ L S+ + + SF K LT SD
Sbjct: 84 MLKAEHDTDEVYAQITLKP--------EEDQSELTSLDPPLVEPTKQMFHSFVKILTASD 135
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD P Q +V +D+HG W+F+HI+RG PRRHLLTTG
Sbjct: 136 TSTHGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTG 195
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
WSTFV+ K+LVA GD V +R NG
Sbjct: 196 WSTFVSSKRLVA-----------GDAFVFLR------------------GENGD------ 220
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----S 297
LR ++AR+ + S S S M L +A A+ +
Sbjct: 221 -------LRVGVRRLARHQSTMPTSVISSQS--------------MHLGVLATASHAVVT 259
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
F V Y PR S +F V + AM+ + G RF+M FE E+S F GTI V
Sbjct: 260 KTIFLVFYKPRIS--QFIVGVNKYMEAMKHGFSLGTRFRMRFEGEESPE-RMFTGTI--V 314
Query: 358 QVADPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPV 402
+ D S WP S WR LQV WDEP Q RVSPW +E +S+ PV
Sbjct: 315 GIGDLSSQWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEPFLSSPPV 361
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----VLYQDASGAIKRTG 671
KV ++ VGR +DL++L SY EL + L MF I + +L+ V++ D G + G
Sbjct: 455 KVIMQGVAVGRAVDLTLLKSYNELIKELEEMFEI-KGQLLTREKWVVVFTDDEGDMMLAG 513
Query: 672 DEPFSDFMKSAKRLTILMGSGSDSVGR 698
D+P+++F K AK++ I SD V +
Sbjct: 514 DDPWNEFCKMAKKIFIY---SSDEVKK 537
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 144/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L + +G S++P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQ--KDTFLPME-LGM--PSKQPTNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 230
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 604 QVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----V 658
QV L KV+ + VGR+LD+S SSY EL LA MFGIE H +
Sbjct: 717 QVDPPTLSRTFVKVY-KLGSVGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQL 775
Query: 659 LYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
++ D + GD+P+ F+ + + IL
Sbjct: 776 VFVDRENDVLLLGDDPWEAFVNNVWYIKIL 805
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 211/712 (29%), Positives = 298/712 (41%), Gaps = 111/712 (15%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V +P VFYFPQGH E S N + R+P I CRV ++
Sbjct: 25 ELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVINIH 84
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LA+ +TDEVYA+I L+P E D + S S SF K LT SD +
Sbjct: 85 LLAEQDTDEVYAQITLLP----ESDQTEPTSPDPSPAEPSRRPAVHSFCKVLTASDTSTH 140
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P+LD T P Q +VAKD+HG W+F+HI+RG PRRHLLT
Sbjct: 141 GGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT------ 194
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS--NNGSCVTGNPFG 243
+GW++ + V G+ F
Sbjct: 195 -----------------------------------------TGWSTFVTSKRLVAGDSF- 212
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
FLR E ++ R G L S S + VL + A + + V
Sbjct: 213 ---VFLRGENGEL-RVGVRRLARQQSSMPSSVISSQSMHLG---VLATASHAVATQTLFV 265
Query: 304 VYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VYY PR S +F + + A+ + GMRFKM FE EDS F GTI V+ P
Sbjct: 266 VYYKPRTS--QFIISLNKYLEAINNKFSVGMRFKMRFEGEDSPERR-FSGTIVGVEDFSP 322
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
W +S WR L+V WDEP + +VSPW +E S ++S P + K P ++
Sbjct: 323 -HWLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPFSASAPSNISQPVPLKNKRPRPP-IE 380
Query: 423 FP-FDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGA-----RHAQFGISSSDFHVNNK 476
P D T + L S L LS T+ G + H Q I+S ++
Sbjct: 381 VPTLDLSSTASPLWNSRLTQSHDLTQLS-VTAEGKRNENHIMWHHKQNDINSHSNSISRT 439
Query: 477 LQSGLFLSS---------LQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSE 527
G +LSS Q T +S+ S+ S L ++ L+ E
Sbjct: 440 QTEGGWLSSPLVNVSQHLFQEVTEDSKSVSNWPVVSGYSTPQSSKL-----NDSILDPVE 494
Query: 528 NIKKHQ----FLLFGQPIRTEQQISHSCS----DDVVSQVLGKSSSDGHSDKVKASSDGS 579
+K + LFG + I+HS S + +Q L SS + V S +
Sbjct: 495 KGRKSDVATSYRLFGIEL-----INHSASSLPTEKAPAQPLSVSSGTTEAHVVSTLS-AA 548
Query: 580 GSTHEQRISIEKSSSSEFFWNRSFQVTESGLDT-GHCKVFLESEDVGRTLDLSVLSSYEE 638
S + IS E+ + Q +S T KV ++ VGR +DL+++ Y +
Sbjct: 549 DSDQKSDISKERKPEQLHVSPKDAQSRQSSASTRSRTKVQMQGVAVGRAIDLTMIKGYNQ 608
Query: 639 LYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L L MF I+ ++Y D G + GD+P+ +F +R+ I
Sbjct: 609 LLDELEEMFDIKGQLHPRDKWEIVYTDDEGDMMLVGDDPWPEFCNMVRRIFI 660
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/215 (45%), Positives = 135/215 (62%), Gaps = 7/215 (3%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
++ +LW+ACAG +V +PP S V YFPQGH+E S+ PS +P + C +
Sbjct: 20 VNQELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 79
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
S+ +D ETDEVYA++ L P+ +N + L + + + F KTLT SD
Sbjct: 80 HSVTMQSDPETDEVYARMTLQPV-SNVTQCDKEILLASELALKQNKPQTEFFCKTLTASD 138
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFPRLD++ PP Q + A+D+H IW FRHI+RG P+RHLLTTG
Sbjct: 139 TSTHGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQPKRHLLTTG 198
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS F++ K+L+AGDS++F+R L +GIRRA +
Sbjct: 199 WSLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANR 233
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + + + A+ + L GMRF+M FETE+S +MGTI+ +
Sbjct: 266 FTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESG-TRRYMGTITGISD 324
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR +QV WDE + RVS W +E V I+ +P A K+ R P
Sbjct: 325 LDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIEPVIAPFFIYPTPLFTA-KRARQPG 383
Query: 420 QLD 422
+D
Sbjct: 384 MID 386
Score = 47.0 bits (110), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE +S + ++Y+D + GD+P+ DF
Sbjct: 981 VGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKDVLLVGDDPWEDF 1040
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1041 LNCVRCIRIL 1050
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/219 (47%), Positives = 146/219 (66%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIP------PLIF 58
+KS++ +LWHACAG +V +P + S V YFPQGH+E S N + IP P +
Sbjct: 19 KKSLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVNGHIPNYPSLSPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ N+ + +D+ L +G S++P + F KTL
Sbjct: 79 CQLHNVTMHADMETDEVYAQMTLQPL--NQQEQKDSYLPAE-LGV--PSKQPTNYFCKTL 133
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD+T PP Q +VA+D+H WKFRHI+RG P+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELVARDLHDVEWKFRHIFRGQPKRHL 193
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 232
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S KA MRF+M FET++SS + +MG I+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLSKYAKAVFHTRISDDMRFRMLFETDESS-VRRYMGRITGISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ W NS WR ++V WDE + RVS W +E ++ P+
Sbjct: 324 LDPVRWSNSHWRSVKVIWDESTAGERQPRVSLWEIEPLTTFPM 366
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLS--HVLYQDASGAIKR 669
KV+ +S VGR+LD++ SSY EL L MFG+ R + S +++ D +
Sbjct: 671 VKVY-KSGSVGRSLDIAQFSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDRENDVLL 729
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ + + IL ++G+
Sbjct: 730 LGDDPWESFVNNVWYIKILSPDDVQNMGK 758
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 133/216 (61%), Gaps = 9/216 (4%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
KSI+ +LWHACAG +V +PP+ S V YFPQGH+E S+ PS + + C
Sbjct: 18 KSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFVPSYPNLTSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ ++ AD ETDEVYA++ L P+ ++ L + +G + F KTLT S
Sbjct: 78 LHNVTLHADVETDEVYAQMTLQPVSK----YDKEALLASDLGQKQSRQPTEFFCKTLTAS 133
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGF VPR AE IFP LD++ PP Q +VA+D+H W FRHIYRG P+RHLLTT
Sbjct: 134 DTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRHLLTT 193
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K++ GDS++F+R + L +GIR A +
Sbjct: 194 GWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANR 229
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y P AS EF + S AM GMRF+M F TE+S + +MGTI+ +
Sbjct: 261 PFTIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESG-VRRYMGTITGISD 319
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
DP+ W NS WR LQV WDE + RVS W +E V
Sbjct: 320 LDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPV 357
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 942 VGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDW--KLVYVDRENDILLVGDDPWE 999
Query: 677 DFMKSAKRLTIL 688
+FM + + IL
Sbjct: 1000 EFMSCVQSIKIL 1011
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 205 bits (522), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 14/220 (6%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPI-PANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C++ ++ AD ETDEVYA++ L P+ P + D + V S++P + F KT
Sbjct: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQKD------TFLPVELGIPSKQPTNYFCKT 131
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RH
Sbjct: 132 LTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRH 191
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 231
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 113/249 (45%), Gaps = 43/249 (17%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 264 FTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 322
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WPNS WR ++V WDE + RVS W +E ++ P+ P+ LRL +
Sbjct: 323 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKR 376
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--HAQFGISSSDFHVNNKL 477
P G +S L D + G+ R G+ S +F
Sbjct: 377 ------------PWHPG-----ASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQT---- 415
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
G+F + QR P F G + ++ +L G QNL + +K+ Q++ F
Sbjct: 416 -VGMFPWTQQRLDPT---FLG-----NDHNQQYQAMLAAG--LQNLGSGDPLKQ-QYMQF 463
Query: 538 GQPIRTEQQ 546
QP + QQ
Sbjct: 464 QQPFQYLQQ 472
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ SSY EL L MFGIE RS +++ D +
Sbjct: 722 VKVY-KSGSVGRSLDITRFSSYHELREELGQMFGIEGKLENPLRSGW--QLVFVDRENDV 778
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGMRTPKNGLDASNKTG 718
GD+P+ F+ + + IL +G+ I +P N N +G
Sbjct: 779 LLLGDDPWEAFVNNVWYIKILSPEDVQKMGKQGIESGFSP-NSAQRMNSSG 828
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP +
Sbjct: 23 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 82
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 83 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 138
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLL 198
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIR A +
Sbjct: 199 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATR 236
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 269 FTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 327
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 328 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 370
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/374 (36%), Positives = 185/374 (49%), Gaps = 74/374 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LWHACAG +V +P S V Y PQGH + G ++ +PP + CRV+ ++ AD+
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGD---VAADLPPHVVCRVADVELCADA 80
Query: 71 ETDEVYAKIKLVPIPANEIDFEDN--------NLSLNSVGSDSESEKPASFAKTLTQSDA 122
TDEV A++ LV A F N + + ++ +S F KTLT SD
Sbjct: 81 ATDEVCARLALV---AEGEAFGRNLGGGGVEGDDGMEDFDAERKSGMLHMFCKTLTASDT 137
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGW
Sbjct: 138 STHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRHLLTTGW 197
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S+FVN+KKLV+GD+++FLR DG+L +G+RRA +
Sbjct: 198 SSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQ-------------------------- 231
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP-F 301
L+ E + FNS R + L AVA + + F
Sbjct: 232 ------LKNEA------------LFEDFNSDSTKRHS---------LTAVADSLKNRSVF 264
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETED-SSRISWFMGTISSVQV 359
+ Y PRA+ E+ + + ++ H +C G R ED S R S G + +
Sbjct: 265 HISYNPRATASEYIIPYAKFLKSLN-HPVCIGARINFQCHNEDVSERRS---GVVVRISE 320
Query: 360 ADPISWPNSPWRLL 373
DP+ WP S WR L
Sbjct: 321 IDPMKWPGSKWRSL 334
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 205 bits (522), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 144/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L + +G S++P++ F KTL
Sbjct: 77 CQLHNITMHADVETDEVYAQMTLQPLTPQEQ--KDTFLPME-LGI--PSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Score = 45.8 bits (107), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE D L +++ D +
Sbjct: 720 VKVY-KSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLL 778
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 779 LGDDPWESFVNNVWYIKIL 797
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 205 bits (521), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 134/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ + PS +P + C
Sbjct: 40 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 99
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ + AD +TDEVYA++ L P+ + L ++ + + F KTLT S
Sbjct: 100 LHGVNLHADPDTDEVYAQMTLQPVNT----YGKEALQISELALKQARPQMEFFCKTLTAS 155
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTT 215
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++ +R + L +GIRRA +
Sbjct: 216 GWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANR 251
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 283 PFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELG-TRRYMGTITGIS 341
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQV WDE + RVS W +E V+ + PF ++ P
Sbjct: 342 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKR----P 397
Query: 419 QQLD 422
+QLD
Sbjct: 398 RQLD 401
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL LA MFGIE R + ++Y+D I GD+P+ +F
Sbjct: 1020 VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEF 1079
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1080 VNCVRCIRIL 1089
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 134/216 (62%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+ + PS +P + C
Sbjct: 37 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 96
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ + AD +TDEVYA++ L P+ + L ++ + + F KTLT S
Sbjct: 97 LHGVNLHADPDTDEVYAQMTLQPVNT----YGKEALQISELALKQARPQMEFFCKTLTAS 152
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTT
Sbjct: 153 DTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTT 212
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++ +R + L +GIRRA +
Sbjct: 213 GWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANR 248
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 6/124 (4%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 280 PFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELG-TRRYMGTITGIS 338
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQV WDE + RVS W +E V+ + PF ++ P
Sbjct: 339 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKR----P 394
Query: 419 QQLD 422
+QLD
Sbjct: 395 RQLD 398
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL LA MFGIE R + ++Y+D I GD+P+ +F
Sbjct: 1017 VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEF 1076
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1077 VNCVRCIRIL 1086
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP +
Sbjct: 23 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 82
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 83 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 138
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLL 198
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIR A +
Sbjct: 199 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATR 236
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 269 FTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 327
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 328 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 370
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 721 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 777
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 778 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 808
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 141/219 (64%), Gaps = 14/219 (6%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP + C
Sbjct: 18 KCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPI-PANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
++ ++ AD ETDEVYA++ L P+ P + D + V S++P + F KTL
Sbjct: 78 QLHNVTMHADVETDEVYAQMTLQPLTPQEQKD------TYIPVELGIPSKQPTNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHDVEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 230
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTIFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGIGD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DPI W NS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDPIRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 137/216 (63%), Gaps = 8/216 (3%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL---GSVNFPSSSRIPPLIFCRVSS 63
++ +LWHACAG+ V +P S V Y PQ H G ++ P+ R+PP + CRV
Sbjct: 16 AVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPPRVPPHVVCRVVD 75
Query: 64 LKFLADSETDEVYAKIKLVPIPA----NEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ AD+ TDEVYA++ LV + N D E + D E + + F KTLT
Sbjct: 76 VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
TTGWS+F+N+KKLV+GD+++FLR DG+L +G+RRA
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRA 231
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 287 MVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
++L AVA + + F + + PR EF V ++ + G RFK+ E ED++
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDAN 310
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH 404
S+ G I + DPI WP S W+ L + WD + RVSPW +E V S++ V H
Sbjct: 311 ERSF--GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 368
Query: 405 -LSPFSPARKKLRL-PQQLDFP-FDG 427
LS R KL P LD P DG
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDG 394
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 204 bits (520), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 150/404 (37%), Positives = 196/404 (48%), Gaps = 78/404 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P V+YFPQGH E S++ ++P I C+V +++
Sbjct: 26 ELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEPQMPLFNLPSKILCKVVNVQ 85
Query: 66 FLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ ETDEVYA+I L+P P +E+ D L + E SF KTLT SD +
Sbjct: 86 RRAEPETDEVYAQITLLPEPDQSEVTSPDPPLP------EPERCTVHSFCKTLTASDTST 139
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG PRRHLLTTGWS
Sbjct: 140 HGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSV 199
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ KKLVA GD + +R NG G
Sbjct: 200 FVSSKKLVA-----------GDAFIFLR------------------GENGELRVG----- 225
Query: 245 FSCFLREEEN---KMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
+R++ N + + +M+L ++ A A+G F
Sbjct: 226 VRRLMRQQTNMPSSVISSQSMHLG---------------------VLATASHAIATGTLF 264
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQVA 360
V Y PR S EF V + +R H L GMRFKM FE E+ F GTI V V
Sbjct: 265 SVFYKPRTSRSEFIVSLNKY-LEVRNHKLSVGMRFKMRFEGEEVPERR-FSGTI--VGVG 320
Query: 361 DPIS--WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMP 401
D IS W +S WR L+V WDEP + +RVS W +E LV+ P
Sbjct: 321 DNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVATTP 364
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLS 656
RS Q +S KV ++ VGR +DL+ YE+L R+L MF IE S
Sbjct: 527 RSSQELQSRQIRSCTKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIEGELSGSTKKW 586
Query: 657 HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
V+Y D + + GD+P+++F K++ I
Sbjct: 587 QVVYTDNEDDMMKVGDDPWNEFCGMVKKIFI 617
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 135/216 (62%), Gaps = 8/216 (3%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNF---PSSSRIPPLIFCRVSS 63
++ P+LWHACAG+ V +P S V Y PQ H P+ R+PP + CRV
Sbjct: 16 AVCPELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGGLAPAPPRVPPHVVCRVVD 75
Query: 64 LKFLADSETDEVYAKIKLVPIPA----NEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ AD+ TDEVYA++ LV + N D E + D E + + F KTLT
Sbjct: 76 VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
TTGWS+F+N+KKLV+GD+++FLR DG+L +G+RRA
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRA 231
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 287 MVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
++L AVA + + F + + PR EF V ++ H+ G RFK+ E ED++
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDAN 310
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH 404
S+ G I + DPI WP S W+ L + WD + RVSPW +E V S++ V H
Sbjct: 311 ERSF--GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 368
Query: 405 -LSPFSPARKKLRL-PQQLDFP-FDG 427
LS R KL P LD P DG
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDG 394
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 133/395 (33%), Positives = 185/395 (46%), Gaps = 100/395 (25%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
KSI+ +LWHACAG +V +PP+ S V YFPQGH+E
Sbjct: 88 KSINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQ------------------------- 122
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
AD+ETDEVYA++ L P ++ L + +G + F KTLT SD +
Sbjct: 123 --ADAETDEVYAQMTLQP-------YDKEALLASDLGLKQSRQPVEFFCKTLTASDTSTH 173
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR AE IFP LD++ PP Q +VA+D+H W FRHIYRG P+RHLLTTGWS F
Sbjct: 174 GGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRHLLTTGWSVF 233
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V+ K+L AGDS++
Sbjct: 234 VSTKRLFAGDSVL----------------------------------------------- 246
Query: 246 SCFLREEENKM---ARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
F+R+E++++ R N + S S ++ G ++ A AA+ PF
Sbjct: 247 --FIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIG------ILAAAAHAAANNSPFT 298
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
+ Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 299 IFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITGISELRC 357
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
+ + + T +P + RVS W +E V
Sbjct: 358 CA-------MEKFTMAQPSAGERPSRVSIWEIEPV 385
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 1067 VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWE 1124
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1125 EFVSCVQSIKIL 1136
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 137/216 (63%), Gaps = 8/216 (3%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL---GSVNFPSSSRIPPLIFCRVSS 63
++ +LWHACAG+ V +P S V Y PQ H G ++ P+ R+PP + CRV
Sbjct: 16 AVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPPRVPPHVVCRVVD 75
Query: 64 LKFLADSETDEVYAKIKLVPIPA----NEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ AD+ TDEVYA++ LV + N D E + D E + + F KTLT
Sbjct: 76 VELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEKKHASHMFCKTLT 135
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLL 195
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
TTGWS+F+N+KKLV+GD+++FLR DG+L +G+RRA
Sbjct: 196 TTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRA 231
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Query: 287 MVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
++L AVA + + F + + PR EF V ++ + G RFK+ E ED++
Sbjct: 251 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCENEDAN 310
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH 404
S+ G I + DPI WP S W+ L + WD + RVSPW +E V S++ V H
Sbjct: 311 ERSF--GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVLVTH 368
Query: 405 -LSPFSPARKKLRL-PQQLDFP-FDG 427
LS R KL P LD P DG
Sbjct: 369 RLSSSVSKRTKLCFPPSDLDTPILDG 394
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 135/218 (61%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V Y PQGH+E S N P+ +PP +
Sbjct: 17 KRCLNSELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E + + +V + F KTLT
Sbjct: 77 CQLHDVTMHADVETDEVYAQMTLQPLTQQE----QKDAYVPTVLGFPSKQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ L +GIRRA +
Sbjct: 193 TTGWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATR 230
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 68/125 (54%), Gaps = 6/125 (4%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A KA GMRF+M FETE+S + +MGTI+
Sbjct: 263 FTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESG-VRRYMGTITGKCD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR ++V WDE + RVS W +E ++ P ++ SPF+ +L+ P
Sbjct: 322 LDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPLTTFP-MYPSPFA---LRLKRPW 377
Query: 420 QLDFP 424
Q P
Sbjct: 378 QPGLP 382
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGRTLD+S SSYEEL ++A MFG+E D L +++ D GD P+ F
Sbjct: 719 VGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLLGDGPWEAF 778
Query: 679 MKSAKRLTILMGSGSDSVGRTWITGMRTPKNG 710
+ + + IL +G + + NG
Sbjct: 779 VNNVWYIKILSPHDIQMMGTNGVDQLHRQSNG 810
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 144/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLV 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L + +G S++P++ F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQ--KDTFLPME-LGV--PSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE D L +++ D +
Sbjct: 719 VKVY-KSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLL 777
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 778 LGDDPWESFVNNVWYIKIL 796
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 143/251 (56%), Gaps = 45/251 (17%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEH------------------------ 40
+ SI +LWHACAG ++ +PP S V YFPQGH E
Sbjct: 26 QSSICSELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPVAPV 85
Query: 41 ----SLGSVNFPSSSR-----------IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIP 85
++ S++ +S + +PP I CRV ++ AD E DEVYA++ LVP
Sbjct: 86 LEKTAVASMHVAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQEMDEVYAQLTLVP-- 143
Query: 86 ANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYT 145
+ E + + S S P F KTLT SD + GGFSVPR AE FP LDYT
Sbjct: 144 ----ESEKSEKCMEEQVPASTSCTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYT 199
Query: 146 ADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
P Q +VAKD+HG W+FRHI+RG PRRHLLTTGWS FV+ K+LV+GD+++FLR ++G
Sbjct: 200 QQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDAVLFLRGENG 259
Query: 206 DLCVGIRRAKK 216
+L +GIRRA +
Sbjct: 260 ELRLGIRRASR 270
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL A A A + K F + + PR S EF + + GMRFKM FETED++
Sbjct: 289 VLTAAAHAVATKSMFHIFFNPRTSPAEFVIPYHKYVKSFNHPLAIGMRFKMRFETEDAAE 348
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLS 406
+ GTI+ + +P WP S WR L+V WDE + +RVSPW +E + +++
Sbjct: 349 RR-YTGTITGIGDVEPARWPGSKWRSLKVEWDEHAANERQERVSPWEIEPFISSTGLNI- 406
Query: 407 PFSPARKKLR 416
P P K+LR
Sbjct: 407 PAGPRIKRLR 416
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS------HVLYQDASGAIKR 669
KV + VGR +DLS Y+EL R L +F +E ++LS HV+Y D G I
Sbjct: 788 KVHKQGNAVGRAVDLSKFHGYDELIRELERLFNME--NLLSDPEKGWHVVYTDNEGDIML 845
Query: 670 TGDEPFSDFMKSAKRLTI------------LMGSGSDSVGRTWITGMRTPKNGLDASNKT 717
GD+P+ +F ++ I ++ + S T + K +D + +
Sbjct: 846 VGDDPWQEFCSIVCKIMIYTREEVEKMTPGMLSDDAQSCFEQQPTTLDVSKCSIDGQDSS 905
Query: 718 GPL 720
PL
Sbjct: 906 SPL 908
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 143/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L + +G S++P + F KTL
Sbjct: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQ--KDTFLPME-LGI--PSKQPTNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 231
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V + PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+S+
Sbjct: 264 FTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITSISD 322
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 323 MDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 365
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIER--SDMLS---HVLYQDASGAIKR 669
KV+ +S VGR+LD+S +SY EL LA MFGIE D L +++ D +
Sbjct: 718 VKVY-KSGSVGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLL 776
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 777 LGDDPWESFVNNVWYIKIL 795
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 24 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 84 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 139
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 199
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 200 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 237
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 270 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 328
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 329 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 371
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 722 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 778
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 779 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 809
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 143/221 (64%), Gaps = 16/221 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 20 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLV 79
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPI-PANEID-FEDNNLSLNSVGSDSESEKPAS-FAK 115
C++ ++ AD ETDEVYA++ L P+ P + D F L + S++P++ F K
Sbjct: 80 CQLHNVTMHADVETDEVYAQMTLQPLTPEEQKDTFLPMELGI-------PSKQPSNYFCK 132
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+R
Sbjct: 133 TLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKR 192
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 HLLTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 233
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 266 FTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 324
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + W NS WR ++V WDE + RVS W +E ++ P+
Sbjct: 325 LDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 367
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 598 FWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDML 655
F + Q+ + KV+ +S VGR+LD+S S Y EL L MFGIE D L
Sbjct: 709 FLQNAEQIDTQNQNPTFVKVY-KSGSVGRSLDISRFSCYRELREELGQMFGIEGKLEDPL 767
Query: 656 S---HVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
+++ D + GD+P+ F+ + + IL
Sbjct: 768 RSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKIL 803
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 25 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 85 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 140
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 141 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 200
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 201 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 238
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 271 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 329
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 330 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 372
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 720 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 776
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 777 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 807
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 25 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 85 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 140
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 141 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 200
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 201 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 238
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 271 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 329
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 330 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 372
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 722 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 778
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 779 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 809
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 24 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 84 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 139
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 199
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 200 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 237
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 270 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 328
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 329 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 371
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 723 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 779
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 780 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 810
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 24 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 84 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 139
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 199
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 200 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 237
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 270 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 328
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 329 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 371
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 725 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 781
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 782 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 812
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 140/218 (64%), Gaps = 12/218 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP + C
Sbjct: 18 KCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
++ ++ AD ETDEVYA++ L P+ E +D L V S +P + F KTLT
Sbjct: 78 QLHNVTMHADVETDEVYAQMTLQPLTLQEQ--KDTYLP---VELGIPSRQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATR 230
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 112/255 (43%), Gaps = 45/255 (17%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V + PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGIGD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR ++V WDE + RVS W +E ++ P+ P+ LRL +
Sbjct: 322 LDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKR 375
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQS 479
P + G +N S I G + S H+ N LQS
Sbjct: 376 ------------PWYPGT--------SSFQENNSEAINGMTWLRGESSEQGPHLLN-LQS 414
Query: 480 --GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
G+F QR P +L + N + +L G N S ++ K Q + F
Sbjct: 415 FGGMFPWMQQRVDPT------MLRNDLN--QQYQAMLASGLQNFG---SGDLMKQQLMQF 463
Query: 538 GQPIRTEQQISHSCS 552
QP+ Q + H+ S
Sbjct: 464 PQPV---QYVQHAGS 475
Score = 43.9 bits (102), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S +GR+LD++ +SY EL + L MFGIE RS +++ D +
Sbjct: 720 VKVY-KSASLGRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGW--QLVFVDRENDV 776
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGM-RTPKNGLDASN 715
GD+P+ +F+ + + IL +G+ + + R P + ++N
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKLGKEEVGSLNRGPPERMSSNN 825
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 144/219 (65%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L + +G S++P++ F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLTPQEQ--KDTFLPME-LGV--PSKQPSNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANR 230
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Score = 45.8 bits (107), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE D L +++ D +
Sbjct: 723 VKVY-KSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLL 781
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 782 LGDDPWESFVNNVWYIKIL 800
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 24 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 83
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 84 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 139
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 199
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 200 TTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 237
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 270 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 328
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 329 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 371
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 722 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 778
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 779 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 809
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 157/425 (36%), Positives = 200/425 (47%), Gaps = 92/425 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW CAG +V++P VFYFPQGH E + S N +S +PP I CRV +
Sbjct: 25 ELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRVLDV 84
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ ETDEVYA+I L P E E +L VG + SF K LT SD +
Sbjct: 85 TLKAEHETDEVYAQITLQP---EEDQSEPTSLDPPIVGPTKQEFH--SFVKILTASDTST 139
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +V +D+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 140 HGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVA GD V +R NG
Sbjct: 200 FVSSKRLVA-----------GDAFVFLR------------------GENGD--------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
LR ++AR+ + S S S M L +A A+ +
Sbjct: 222 ----LRVGVRRLARHQSTMPTSVISSQS--------------MHLGVLATASHAVRTTTI 263
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRI-----SW----F 350
F V Y PR S +F V + A++ + G RF+M FE E+S RI +W F
Sbjct: 264 FVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWNVFRF 321
Query: 351 MGTISSVQVADPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS 409
GTI V D S WP S WR LQV WDEP +Q +VSPW +E P + SP S
Sbjct: 322 TGTI--VGSGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPIS 374
Query: 410 -PARK 413
PA++
Sbjct: 375 TPAQQ 379
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----VLYQDASGAIKRTG 671
KV ++ VGR +DL++L SY+EL L MF I+ +L+ V++ D G + G
Sbjct: 504 KVQMQGIAVGRAVDLTLLKSYDELIDELEEMFEIQ-GQLLARDKWIVVFTDDEGDMMLAG 562
Query: 672 DEPFSDFMKSAKRLTILMGSGSDSVGR 698
D+P+++F K AK++ I SD V +
Sbjct: 563 DDPWNEFCKMAKKIFIY---SSDEVKK 586
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 2 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 61
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 62 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 117
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 118 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHLL 177
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 178 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 215
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 248 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 306
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 307 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 349
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 699 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 755
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 756 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 786
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/417 (34%), Positives = 196/417 (47%), Gaps = 79/417 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG +V +P + VFY PQGH E S N + + PL I C+V ++
Sbjct: 32 ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD-----SESEKPA--SFAKTL 117
+ A+ +TDEVYA++ L+P + + N+S + V + + +E+P SF KTL
Sbjct: 92 ELKAEPDTDEVYAQLTLLPEKQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKTL 151
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRHL
Sbjct: 152 TASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHL 211
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
L +GWS VF+ A+ V
Sbjct: 212 LQSGWS--------------VFVSAK-------------------------------RLV 226
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA-- 295
G+ F FLR E NG + + + N + M L +A A
Sbjct: 227 AGDAF----IFLRGE------NGELRVGVRRAMRQQANIPSSVISSH-SMHLGVLATAWH 275
Query: 296 --ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
+G F V Y PR S EF V K +++ + GMRFKM FE E+++ F GT
Sbjct: 276 AVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQR-FTGT 334
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
I V +DP W +S WR L+V WDE + RVSPW +E P SP +P
Sbjct: 335 IVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIE-----PANSPSPVNP 386
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 124/346 (35%), Positives = 173/346 (50%), Gaps = 62/346 (17%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IF 58
+E ++ +LWHACAG +V +P V+YFPQGH E S N + ++P I
Sbjct: 30 LETALYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEASTNQFADQQMPIYDLRSKIL 89
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
CRV +++ A +TDEV+A+I L+P P + +N + SF KTLT
Sbjct: 90 CRVINVQLKAKPDTDEVFAQITLLPEPNQD----ENAVEKEPPPPLLPRFHVHSFCKTLT 145
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSV R AE P LD + PP Q +VAKD+HG W+FRHI+RG PRRHLL
Sbjct: 146 ASDTSTHGGFSVLRRHAEECLPVLDMSQQPPTQDLVAKDLHGNEWRFRHIFRGQPRRHLL 205
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVT 238
+GWS FV+ K+LVAGD+ +FLR + +L VG+RRA + G PSS +S+
Sbjct: 206 QSGWSVFVSSKRLVAGDAFIFLRCEK-ELRVGVRRAMRQQGN---VPSSVISSH------ 255
Query: 239 GNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASG 298
+M+L + A ++G
Sbjct: 256 ----------------------SMHLGVLAT---------------------AWHAVSTG 272
Query: 299 KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS 344
F V Y PR S EF V +++ ++ GMRFKM FE E++
Sbjct: 273 TMFTVYYKPRISPAEFIVPFDQYMESVKSNYSIGMRFKMRFEGEEA 318
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 186/395 (47%), Gaps = 72/395 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRI----------PPLIFCR 60
+LW ACAG +V++P VFYF QGH E V PS ++ P I CR
Sbjct: 14 ELWRACAGPLVELPQPGQRVFYFLQGHLEQ----VQQPSDQKVLADQIKMFQVPYKILCR 69
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V +++ A+ ET+EVYA+I L+P E D E S + + SF+K LT S
Sbjct: 70 VVNVELKAEVETEEVYAQITLLP----EQDQEYLPSSPDPPLPEVRRPVVHSFSKILTPS 125
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSV R A P LD + P Q ++ KD+ G W+F+HIYRG PRRHLLTT
Sbjct: 126 DTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQPRRHLLTT 185
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GWSTFV KKLV GD+ V+LR ++G+ VG+R + PSS +S
Sbjct: 186 GWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRH---HVQKRTAMPSSVMSSQ-------- 234
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+M+L S + + T+
Sbjct: 235 --------------------SMHLGVLASASHALQTKSI--------------------- 253
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S ++ V + ++ + G+RFKM+FE E+ + F GTI
Sbjct: 254 FLVYYRPRVSQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVP-VKKFSGTIVGDGAL 312
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P W S W+ +V WD+P +RVSPW +E
Sbjct: 313 SP-QWSCSEWKSKKVQWDDPANCNGPERVSPWEIE 346
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLY 660
R Q +S + KV + VGR +DL+ L YE+L R L MF I+ V +
Sbjct: 585 REIQSNQSCIARNRVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFDIKDIKQNFKVAF 644
Query: 661 QDASGAIKRTGDEPFSDFMKSAKRLTI 687
D G + GD+P+ +F + K++ I
Sbjct: 645 ADNDGDTMKVGDDPWMEFCRMVKKIVI 671
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 139/231 (60%), Gaps = 19/231 (8%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 25 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPI-PANEIDF------------EDNNLSLNSVGSDS 105
C++ + AD ETDEVYA++ L P+ P + F E N+ L +
Sbjct: 85 CQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIM 144
Query: 106 ESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
+ F KTLT SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKF
Sbjct: 145 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKF 204
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 205 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 255
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 288 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 346
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 347 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 389
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 737 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 793
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 794 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 824
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 156/425 (36%), Positives = 201/425 (47%), Gaps = 92/425 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LW CAG +V++P + VFYFPQGH E + S N S +PP I CRV +
Sbjct: 25 ELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVFDLPPKILCRVLGI 84
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ ETDEVYA+I L P E D + SL+ + + SF K LT SD +
Sbjct: 85 TLKAEHETDEVYAQITLQP----EED-QSEPTSLDPPLVEPTKQMFHSFVKILTASDTST 139
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +V +D+HG W+F+HI+RG PRRHLLTTGWST
Sbjct: 140 HGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGWST 199
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV+ K+LVA GD V +R NG
Sbjct: 200 FVSSKRLVA-----------GDAFVFLR------------------GENGD--------- 221
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA----SGKP 300
LR ++AR+ + S S S M L +A A+ +
Sbjct: 222 ----LRVGVRRLARHQSTMPTSVISSQS--------------MHLGVLATASHAVRTTTI 263
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-SRI-----SW----F 350
F V Y PR S +F V + A++ + G RF+M FE E+S RI +W F
Sbjct: 264 FVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPERIVLDSETWSVFRF 321
Query: 351 MGTISSVQVADPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS 409
GTI V D S WP S WR LQV WDEP +Q +VSPW +E P + SP S
Sbjct: 322 TGTI--VGTGDLSSQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIE-----PFLATSPIS 374
Query: 410 -PARK 413
PA++
Sbjct: 375 TPAQQ 379
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR +DL++L SY+EL L MF I+ R V++ D G + GD
Sbjct: 507 KVQMQGIAVGRAVDLTLLKSYDELIEELEEMFEIQGQLRPRDKWIVVFTDDEGDMMLAGD 566
Query: 673 EPFSDFMKSAKRLTILMGSGSDSVGR 698
+P+++F K AK++ I SD V +
Sbjct: 567 DPWNEFCKMAKKIFIY---SSDEVKK 589
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 190/375 (50%), Gaps = 67/375 (17%)
Query: 46 NFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS 105
N+PS +PP + C++ + AD+ETDEVYA++ L P+ E + + +G+
Sbjct: 11 NYPS---LPPQLICQLHDVIMHADAETDEVYAQMTLQPLTLQE---QKDAYLPAELGT-- 62
Query: 106 ESEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWK 164
S +P + F K LT SD + GGFSVPR AE +FP LD+T PP Q ++A+D+HG WK
Sbjct: 63 PSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLHGNEWK 122
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEY 224
FRHI+RG P+RHLLTTGWS FV+ K+LVA GD + I
Sbjct: 123 FRHIFRGQPKRHLLTTGWSVFVSAKRLVA-----------GDAVIFI------------- 158
Query: 225 PSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVK 284
WN N + R GN + S S ++ G
Sbjct: 159 ----WNEKNQLLLG------------------IRRGNRPQSVMPSSVLSSDSMHIG---- 192
Query: 285 PEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETED 343
++ A AA+ F V Y PRAS EF + + KA GMRF+M FETE+
Sbjct: 193 --LLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRISVGMRFRMLFETEE 250
Query: 344 SSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI 403
SS + +MGTI+ + DP WPNS WR ++V WDE + RVS W +E ++ P +
Sbjct: 251 SS-VRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSLWEIEPLTTFP-M 308
Query: 404 HLSPFSPARKKLRLP 418
+ SPF P R LR P
Sbjct: 309 YPSPF-PLR--LRRP 320
Score = 42.4 bits (98), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 625 GRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDFM 679
GR+LD++ SSY EL LA MFG+E D L +++ D + GD+P+ +F+
Sbjct: 735 GRSLDITNFSSYHELRSELASMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFV 794
Query: 680 KSAKRLTILMGSGSDSVGR 698
+ + IL +GR
Sbjct: 795 NNVWCIKILSPQEVQQMGR 813
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 203 bits (516), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 139/231 (60%), Gaps = 19/231 (8%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +P +
Sbjct: 25 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVEGHIPNYPNLPAQLI 84
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPI-PANEIDF------------EDNNLSLNSVGSDS 105
C++ + AD ETDEVYA++ L P+ P + F E N+ L +
Sbjct: 85 CQLHDVTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIM 144
Query: 106 ESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
+ F KTLT SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKF
Sbjct: 145 SKQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKF 204
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 205 RHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 255
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF-----MGTISSVQVADP 362
RAS P+ V S+V ++ +H G+ A +SR + F MGTI+ V ADP
Sbjct: 252 RASRPQ-TVMPSSVLSSDSMH--IGLLAAAAHAAATNSRFTIFYNPRYMGTITEVSDADP 308
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 309 VRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 348
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 139/218 (63%), Gaps = 12/218 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIFC 59
K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP + C
Sbjct: 18 KCLNSELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQLIC 77
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLT 118
+ ++ AD ETDEVYA++ L P+ E +D L V S +P + F KTLT
Sbjct: 78 PLHNVTMHADVETDEVYAQMTLQPLTLQEQ--KDTYLP---VELGIPSRQPTNYFCKTLT 132
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLL 192
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATR 230
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V + PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGIGD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ W NS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 11/109 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAI 667
KV+ +S +GR+LD++ +SY EL + L MFGIE RS +++ D +
Sbjct: 720 VKVY-KSASLGRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGW--QLVFVDRENDV 776
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTWITGM-RTPKNGLDASN 715
GD+P+ +F+ + + IL +G+ + + R P + ++N
Sbjct: 777 LLLGDDPWEEFVNNVWYIKILSPEDVQKLGKEEVGSLNRGPPERMSSNN 825
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 144/418 (34%), Positives = 197/418 (47%), Gaps = 80/418 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG +V +P + VFY PQGH E S N + + PL I C+V ++
Sbjct: 32 ELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKVMNV 91
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDN-NLSLNSVGSD-----SESEKPA--SFAKT 116
+ A+ +TDEVYA++ L+P + + N N+S + V + + +E+P SF KT
Sbjct: 92 ELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSFCKT 151
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PRRH
Sbjct: 152 LTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRH 211
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS VF+ A+
Sbjct: 212 LLQSGWS--------------VFVSAK-------------------------------RL 226
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALA- 295
V G+ F FLR E NG + + + N + M L +A A
Sbjct: 227 VAGDAF----IFLRGE------NGELRVGVRRAMRQQANIPSSVISSH-SMHLGVLATAW 275
Query: 296 ---ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
+G F V Y PR S EF V K +++ + GMRFKM FE E+++ F G
Sbjct: 276 HAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQR-FTG 334
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
TI V +DP W +S WR L+V WDE + RVSPW +E P SP +P
Sbjct: 335 TIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIE-----PANSPSPVNP 387
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/230 (44%), Positives = 146/230 (63%), Gaps = 16/230 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR------IPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S + + +PP I CRV ++
Sbjct: 22 ELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMFDLPPKILCRVVNV 81
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNL-SLNSVGSDSESEKPASFAKTLTQSDAN 123
+ A++++DEVYA+I L P + + N L SL++ + E SF KTLT SD +
Sbjct: 82 ELRAEADSDEVYAQIMLQP------EADQNELTSLDAEPQEREKCTAHSFCKTLTASDTS 135
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R AE P+LD + +PP Q +VAKD+HG W FRHI+RG P+RHLLTTGWS
Sbjct: 136 THGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQPKRHLLTTGWS 195
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNN 233
FV+ K+LV+GD+ +F+R ++G+L VG+RR + + N PSS +S++
Sbjct: 196 VFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQV---NSMPSSVISSHS 242
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 138/226 (61%), Gaps = 12/226 (5%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----IFCRVSSLKF 66
+LWHACAG + +P S V Y PQGH +H LG +++ +FCRV +
Sbjct: 68 ELWHACAGPVAPMPRKGSVVVYLPQGHLDH-LGDAPAHAAASPAAAVPPHVFCRVVDVTL 126
Query: 67 LADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEK------PASFAKTLTQS 120
AD+ TDEVYA++ L+P + S G D E+ K P F KTLT S
Sbjct: 127 HADATTDEVYAQLSLLPENEELVRRMREATDDVSGGEDGETVKQRFARMPHMFCKTLTAS 186
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFS PR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTT
Sbjct: 187 DTSTHGGFSAPRRAAEDCFPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTT 246
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPS 226
GWS FVN+KKLV+GD+++FLR DG+L +G+RRA + + G+ +P+
Sbjct: 247 GWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQ-LKNGSAFPA 291
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + V YFPQGH+E + N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ A ETDEVYA++ L P+ A E +D L + +G S +P + F KTL
Sbjct: 78 CQLHNVTMHAVVETDEVYAQMTLQPLTAQEQ--KDTFLPME-LGI--PSRQPTNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++AKD+H WKFRHI+RG P+RHL
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHL 192
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 231
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + + VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 264 FTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 322
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ WPNS WR ++V WDE + RVS W +E ++ P+
Sbjct: 323 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 365
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 594 SSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSD 653
SSE N S QV S KV+ ++ VGR+LD+S SSY+EL LA MFGIE
Sbjct: 711 SSELLHN-SGQVDPSNPTRTFVKVY-KTGSVGRSLDISRFSSYQELREELAQMFGIEGQL 768
Query: 654 MLS------HVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGRTW------I 701
+ +++ D + GD+P+ F+ + + IL +G I
Sbjct: 769 VEDPRRSGWQLVFVDRENDVLLLGDDPWEAFVNNVGFIKILSPEDFQKLGEQAIESFNPI 828
Query: 702 TGMRTPKNGLDASNKTG 718
G R G +A N +G
Sbjct: 829 VGQRLTSGGNEAGNVSG 845
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/347 (36%), Positives = 176/347 (50%), Gaps = 60/347 (17%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES----E 108
+P I C V +++ A+ +TDEVYA++ L+P + EDN + V S +
Sbjct: 6 LPWKILCEVMNVELKAEPDTDEVYAQLTLLPESKQQ---EDNGSTEEEVPSAPAAGHVRP 62
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
+ SF KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI
Sbjct: 63 RVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHI 122
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSG 228
+RG PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+ ++ + PSS
Sbjct: 123 FRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGV---RRAMRQQTNVPSSV 179
Query: 229 WNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMV 288
+S++ M+L + + NT
Sbjct: 180 ISSHS----------------------------MHLGVLATAWHAVNT------------ 199
Query: 289 LEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRIS 348
G F V Y PR S EF V +++ ++ GMRFKM FE E++
Sbjct: 200 ---------GTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEAPEQR 250
Query: 349 WFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
F GTI + +DP WP S WR L+V WDE + +RVSPW +E
Sbjct: 251 -FTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIE 296
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCK-VFLESEDVGRTLDLSVLSSYEELYRRLAIMF- 647
EK SS + +R+ G+ T CK V + +GR++DL+ + YEEL L MF
Sbjct: 622 EKPSSQQA--SRNMSCKSQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFD 679
Query: 648 ------GIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
G ++ M V+Y D G + GD+P+ +F ++ I
Sbjct: 680 FNGELKGPKKEWM---VVYTDNEGDMMLVGDDPWIEFCDMVHKIFI 722
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 202 bits (515), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P ++S V YFPQGH+E S N P+ +PP +
Sbjct: 7 KKCLNSELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLPPQLI 66
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD+ETDEVYA++ L P+ E + L + ++ F KTLT
Sbjct: 67 CQLHDVTMHADAETDEVYAQMTLQPLSPQE----QKDAFLPAELGIPTNQPTNYFCKTLT 122
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 123 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLL 182
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LV GDS++F+ + L +GIRRA +
Sbjct: 183 TTGWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAAR 220
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PRAS EF + +KA + GMRF+M FETE+SS + +MGTI+S+
Sbjct: 253 FTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESS-VRRYMGTITSISD 311
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR ++V WDE RVS W +E ++ P ++ S F K+ LP+
Sbjct: 312 LDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFP-MYPSLFPLRLKRPWLPE 370
Query: 420 QLDFPFDGQFTMPLFSGN 437
P + ++GN
Sbjct: 371 M--SPLHSTYHRDYYNGN 386
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 614 HCKVFLE---SEDVGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDA 663
HC+ F++ S VGR+LD++ SSY EL L MFG+E RS ++ D
Sbjct: 684 HCQTFVKVYKSGCVGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGW--QLVLVDR 741
Query: 664 SGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVG 697
I GD+P+ F+ S + IL +G
Sbjct: 742 ENDILLMGDDPWEAFVNSVWSIKILSPQDVQQMG 775
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ LW+ACAG +V +PP+ S V YFPQGH+E S+ + PS +P + C
Sbjct: 36 AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 95
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ S+ AD +TDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 96 LHSVTLHADPDTDEVYAQMTLQPVNT----YGKEALQLSELALKHARPQMEFFCKTLTAS 151
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE I P LD++ PP Q + A+D+H +W FRHI+RG P+RHLLTT
Sbjct: 152 DTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTT 211
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV K+L AGDS++F+R + L +GIRRA +
Sbjct: 212 GWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASR 247
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ + +MGTI+ +
Sbjct: 279 PFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELG-MRRYMGTITGIS 337
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQV WDE + RVS W +E ++ I PF ++ P
Sbjct: 338 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFGVKR----P 393
Query: 419 QQLD 422
+Q+D
Sbjct: 394 RQID 397
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL LA MFGIE R + ++Y+D I GD+P+ +F
Sbjct: 1021 VGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEF 1080
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1081 VNCVKCIRIL 1090
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 130/206 (63%), Gaps = 5/206 (2%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
+ +DP++W ACAG+ VQIP L+S V+YFPQGH EH+ S R P + C VSSL
Sbjct: 7 RRVDPKIWRACAGAAVQIPKLHSRVYYFPQGHLEHASPSHYLNPLLRSLPFVPCHVSSLD 66
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
FLAD +DEV+AK L P+ D + N D E+ SF+K LT SDANNG
Sbjct: 67 FLADPFSDEVFAKFLLTPLSQQPFP-NDTTEARNEEEKDRENGV-VSFSKILTPSDANNG 124
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPRYCA++ FP LD+ P V + RHIYRGTPRRHL TTGWS F
Sbjct: 125 GGFSVPRYCADSWFPPLDFXXXXPSSPVATSRRRVAL---RHIYRGTPRRHLFTTGWSKF 181
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGI 211
VN KKLVAGD++VF++ DG + VGI
Sbjct: 182 VNHKKLVAGDTVVFVKDSDGRVSVGI 207
Score = 142 bits (359), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 135/253 (53%), Gaps = 25/253 (9%)
Query: 274 GNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGM 333
G +R GRV E V A AA PFEVVYYPR +F V A V+ +M+ W+ GM
Sbjct: 229 GFSRSATGRVTAEAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGM 288
Query: 334 RFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWL 393
R K+A ETEDSSR++WF GT+SS ++ N PWR+LQV WDEP++LQN KRVSPW
Sbjct: 289 RVKIAMETEDSSRMTWFQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKRVSPWQ 343
Query: 394 VELVSNMPVIHLSPFSPARKKLRLPQQLD----------FPFDG--QFTMPLFSGNP--- 438
VELVS +P + +SP K+LR Q FP G TM +G P
Sbjct: 344 VELVS-LPFALHTVYSP-NKRLRSDQGSGLLSNREGDPFFPMTGFPNSTMEHMTGFPNST 401
Query: 439 LGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDG 498
+G D AG+QGARH F SS +N+K S L++ S F N G
Sbjct: 402 VGHMDKSLLSYDTFPAGMQGARHDLFSPSSFSNFLNDK--SYLYMGS-GSFGNNPVQSLG 458
Query: 499 ILTSHTNSSENLS 511
+T+ N S + S
Sbjct: 459 TVTTELNMSSSQS 471
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 184/392 (46%), Gaps = 68/392 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH---SLGSVNFPSSSRI---PPLIFCRVSSL 64
+LW C+G +V +P V+YFPQGH E S V+ + + PP I C V ++
Sbjct: 10 ELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNV 69
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA+I L+P+ E+D S + + + K SF+K LT SD +
Sbjct: 70 SLQAEKDTDEVYAQITLIPV-GTEVD---GPTSPDPSPPELQRPKVHSFSKVLTASDTST 125
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +VA+DVHG WKF+HI+RG PRRHLLTTGWST
Sbjct: 126 HGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWST 185
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV K+LVA GD V +R K + G
Sbjct: 186 FVTSKRLVA-----------GDTFVFLRGEKGELRVG----------------------- 211
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
R N +S S S ++ G VL A K +V
Sbjct: 212 ------------VRRANRQQSSMPSSVISSHSMHLG-------VLATARHATQTKTMFIV 252
Query: 305 YY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
YY PR S +F + + AM + GMRFKM FE EDS + GT+ V P
Sbjct: 253 YYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPERR-YSGTVIGVNDCSP- 308
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR L+V WDEP + +VSPW +E
Sbjct: 309 HWKDSKWRCLEVHWDEPASISRPNKVSPWEIE 340
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 560 LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFL 619
+ K + D HSD S+ S + E++ + S E Q +S KV +
Sbjct: 479 ISKPTMDSHSD---PKSEISKVSEEKKQEPAEGSPKEV------QSKQSSSTRSRTKVQM 529
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFS 676
+ VGR +DL+ L Y EL + +F I+ +S +++ D G + GD+P+
Sbjct: 530 QGVPVGRAVDLTALKGYNELIDDIEKLFDIKGELQSRNQWEIVFTDDEGDMMLVGDDPWP 589
Query: 677 DFMKSAKRLTI 687
+F KR+ I
Sbjct: 590 EFCNMVKRIFI 600
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 202 bits (513), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 133/222 (59%), Gaps = 16/222 (7%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS------------VNFPSSSRIP 54
+I+ +LWHACAG +V +PP+ S V YFPQGH+E S + PS +P
Sbjct: 40 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLP 99
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFA 114
+ C + + AD +TDEVYA++ L P+ + L ++ + + F
Sbjct: 100 SKLICLLHGVNLHADPDTDEVYAQMTLQPVNT----YGKEALQISELALKQARPQMEFFC 155
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+
Sbjct: 156 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPK 215
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RHLLTTGWS FV+ K+L AGDS++ +R + L +GIRRA +
Sbjct: 216 RHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANR 257
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 289 PFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEELG-TRRYMGTITGIS 347
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP V WDE + RVS W +E V+ + PF ++ P
Sbjct: 348 DLDP------------VGWDESAAGERRNRVSIWEIEPVAAPFFLCPQPFFGVKR----P 391
Query: 419 QQLD 422
+QLD
Sbjct: 392 RQLD 395
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL LA MFGIE R + ++Y+D I GD+P+ +F
Sbjct: 1014 VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEF 1073
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1074 VNCVRCIRIL 1083
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 140/401 (34%), Positives = 197/401 (49%), Gaps = 80/401 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGH-----------AEHSLGSVNFPSSSRIPPLIFC 59
+LW ACAG +V +P V+YFPQGH +EH + S+N PS I C
Sbjct: 48 ELWDACAGPLVTLPREGERVYYFPQGHIEQLGAPIQQQSEHQMASLNLPSK------ILC 101
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+V +++ A+ TD+VYA+I L+P P +ID +S + + E SF + LT
Sbjct: 102 KVINVQCKAEPITDQVYAQIMLLPEP-EQIDV----ISPDPPLPEPERCVVHSFRRILTV 156
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD ++ F V + AE P LD + P Q +VA D++G W F+HI++G +HLLT
Sbjct: 157 SDISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHIFQGKSNKHLLT 216
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGWS FV+ KKLV+GD +FLR ++G+L VG+RR G +N S T
Sbjct: 217 TGWSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLM------------GRKTNILSSATS 264
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
N R+ + + SY ++G
Sbjct: 265 N---------------QIRHSLLAVASYA--------------------------ISTGS 283
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETEDSSRISWFMGTISSVQ 358
F V Y PR S EF V + A R H C GMRF M FE E+ I GTI S++
Sbjct: 284 LFCVFYEPRTSRSEFIVSVNKYIEA-RNHKFCIGMRFLMRFEGEEVP-IERINGTIVSME 341
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 399
+ WP+S WR +V WDEP L+ + +RVSPW +E +S+
Sbjct: 342 TSP--RWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISS 380
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 136/218 (62%), Gaps = 11/218 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP +
Sbjct: 23 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 82
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 83 CQLHDVTMHADVETDEVYAQMTLQPLNPQE----QNDAYLPAEMGIMSKQPTNYFCKTLT 138
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LD+T PP Q ++A+D+H WKFRHI+RG P+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLL 197
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV+ K+LVAGDS++F+ + L +GIR A +
Sbjct: 198 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATR 235
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 268 FTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 326
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 327 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 369
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 720 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 776
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 777 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 807
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 140/220 (63%), Gaps = 13/220 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + S V YFPQGH+E + N P+ +PP +
Sbjct: 18 KKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLI 77
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E + V S++P + F KTL
Sbjct: 78 CQLHNVTMHADVETDEVYAQMTLQPLTPQE-----QKDTFLPVELGIPSKQPTNYFCKTL 132
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG-TPRRH 176
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RH
Sbjct: 133 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRH 192
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 193 LLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATR 232
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 113/249 (45%), Gaps = 43/249 (17%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 265 FTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESS-VRRYMGTITGISD 323
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ WPNS WR ++V WDE + RVS W +E ++ P+ P+ LRL +
Sbjct: 324 LDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMY------PSLFPLRLKR 377
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR--HAQFGISSSDFHVNNKL 477
P G +S L D + G+ R G+ S +F
Sbjct: 378 ------------PWHPG-----ASSLHDSRDEAANGLMWLRGETGDQGLQSLNFQT---- 416
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLF 537
G+F + QR P F G + ++ +L G QNL + +K+ Q++ F
Sbjct: 417 -VGMFPWTQQRLDPT---FLG-----NDHNQQYQAMLAAG--LQNLGSGDPLKQ-QYMQF 464
Query: 538 GQPIRTEQQ 546
QP + QQ
Sbjct: 465 QQPFQYLQQ 473
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 134/215 (62%), Gaps = 7/215 (3%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRV 61
++ +LW+ACAG +V +PP S V YFPQGH+E S+ PS +P + C +
Sbjct: 21 VNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLICIL 80
Query: 62 SSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
++ AD +TDEVYA++ L P+ +N + L + + + F KTLT SD
Sbjct: 81 HNVTMEADPDTDEVYARMTLQPV-SNVTQCDKEILLASEIALKQSRPQTEFFCKTLTASD 139
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSVPR AE IFP+LD++ PP Q + A+D+H W FRHI+RG P+RHLLTTG
Sbjct: 140 TSTHGGFSVPRRAAERIFPQLDFSLQPPAQELQARDLHDNTWTFRHIFRGQPKRHLLTTG 199
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WS F++ K+L+AGDS++F+R L +GIRRA +
Sbjct: 200 WSLFISGKRLLAGDSVLFIRDGKHQLLLGIRRANR 234
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 3/123 (2%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + + + A+ + L GMRF+M FETE+S +MGTI+ +
Sbjct: 267 FTIFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESG-TRRYMGTITGISD 325
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W +S WR +QV WDE + RVS W +E V I+ SP A K+ R P
Sbjct: 326 LDPVRWKSSQWRSIQVAWDEAAPTERRTRVSLWEIEPVIAPFFIYPSPLFTA-KRARQPG 384
Query: 420 QLD 422
+D
Sbjct: 385 MID 387
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE +S + ++Y+D + GD+P+ DF
Sbjct: 986 VGRSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKDVLLVGDDPWEDF 1045
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1046 LNCVRCIRIL 1055
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 132/216 (61%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ LW+ACAG +V +PP+ S V YFPQGH+E S+ + PS +P + C
Sbjct: 40 AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ S+ AD +TDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQPVNT----YGKEALQLSELALKHARPQMEFFCKTLTAS 155
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE I P LD+ PP Q + A+D+H +W FRHI+RG P+RHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTT 215
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV K+L AGDS++F+R + L +GIRRA +
Sbjct: 216 GWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASR 251
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 8/126 (6%)
Query: 300 PFEVVYYPR--ASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISS 356
PF + Y PR AS EF + + + A+ + + GMRF+M FETE+ + +MGTI+
Sbjct: 283 PFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELG-MRRYMGTITG 341
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ DP+ W NS WR LQV WDE + RVS W +E ++ I PF ++
Sbjct: 342 ITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFGVKR--- 398
Query: 417 LPQQLD 422
P+Q+D
Sbjct: 399 -PRQID 403
Score = 46.6 bits (109), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL +A MFGIE R + ++Y D + GD+P+ +F
Sbjct: 1027 VGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDDVLLLGDDPWEEF 1086
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1087 VNCVKCIRIL 1096
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 132/216 (61%), Gaps = 10/216 (4%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCR 60
+I+ LW+ACAG +V +PP+ S V YFPQGH+E S+ + PS +P + C
Sbjct: 40 AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
+ S+ AD +TDEVYA++ L P+ + L L+ + + F KTLT S
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQPVNT----YGKEALQLSELALKHARPQMEFFCKTLTAS 155
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 180
D + GGFSVPR AE I P LD+ PP Q + A+D+H +W FRHI+RG P+RHLLTT
Sbjct: 156 DTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQPKRHLLTT 215
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV K+L AGDS++F+R + L +GIRRA +
Sbjct: 216 GWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASR 251
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF + + + A+ + + GMRF+M FETE+ + +MGTI+ +
Sbjct: 283 PFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEELG-MRRYMGTITGIT 341
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
DP+ W NS WR LQV WDE + RVS W +E ++ I PF ++ P
Sbjct: 342 DLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIEPIAAPFFICPQPFFGVKR----P 397
Query: 419 QQLD 422
+Q+D
Sbjct: 398 RQID 401
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL +A MFGIE R + ++Y D + GD+P+ +F
Sbjct: 1025 VGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDDVLLLGDDPWEEF 1084
Query: 679 MKSAKRLTIL 688
+ K + IL
Sbjct: 1085 VNCVKCIRIL 1094
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 199 bits (507), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/221 (42%), Positives = 137/221 (61%), Gaps = 12/221 (5%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD +TDEVYA++ L P+ + E + + ++G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKDTDEVYAQMTLQPV-----NSETDVFPIPTLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG 217
LLTTGWS FV K+L AGDS++F+R + + R K
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFIRTSPSPFVIPVARYNKA 247
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
V + R S F + + A + GMRF M FETE+SS+ + GT+ + DP+
Sbjct: 227 VLFIRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSK-RRYTGTVVGISDYDPM 285
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
WPNS WR LQV WDE + +RVS W +E N V S + R+ L
Sbjct: 286 RWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPSSTLNSKRQCL 337
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 12/219 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +L HACAG +V +P + S V YFPQGH+E + N P+ +PP +
Sbjct: 17 KKCLNSELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L V S +P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQMTLQPLTRQEQ--KDTYLP---VELGIPSRQPTNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHL 177
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHL 191
Query: 178 LTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATR 230
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V + PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 263 FTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESS-VRRYMGTITGIGD 321
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
DP+ W NS WR ++V WDE + RVS W +E ++ P+
Sbjct: 322 LDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPM 364
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 193/703 (27%), Positives = 299/703 (42%), Gaps = 129/703 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E L S +P + CRV ++
Sbjct: 4 QLWKLCAGPLCDIPKLGENVYYFPQGNIE--LASTREELNELQPICDLPSKLQCRVIAIH 61
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSDA 122
++ +DE+YA+I L+P + + + SE+ +P SF K LT SD
Sbjct: 62 LKVENNSDEIYAEITLMPDTTQVV-----------IPTQSENRFRPLVNSFTKVLTASDT 110
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVP+ A P LD + P Q ++A D+H W+FRH YRGTP+RH LTTGW
Sbjct: 111 SAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGW 170
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
+ F+ KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 171 NEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------I 213
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
C +G S+ + N + + + F
Sbjct: 214 VSIDCM-----------------RHGVIASAKHAFDN----------QCIFIVVYKPRFI 246
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
+ + +F V A+ + G RF M FE +D S +F GTI V P
Sbjct: 247 FCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDFSP 305
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
W S WR L+V WDE +VSPW +E + +P +++ P S K RL + +
Sbjct: 306 -HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALNV-PRSSLLKNKRLREVNE 361
Query: 423 FPFDGQFTMP--LFSGNPLGP---SSPLCC---LSDNTSAGIQGARHAQFGISSSDFHVN 474
F +P L G +G +SP+ D T A + +R
Sbjct: 362 FGSSSSHLLPPILTQGQEIGQLSVASPMNISLRYRDTTEAAMNPSR-------------- 407
Query: 475 NKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQF 534
L +S + P + ++ T EN++ T +N F
Sbjct: 408 ------LLMSYPVQPMPKLNYNNQMV---TQIEENIT---TKAGTN-------------F 442
Query: 535 LLFGQPIRTE-------QQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRI 587
LFG + T +QI S + G+S + ++++ S T ++
Sbjct: 443 RLFGVTLDTPPMIKDPIKQIGSDISKLTERKKFGQSQTLRSPIEIQSKQFSSSRTC-TKV 501
Query: 588 SIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
SI +S S + + F + + + +V ++ +GR +DLSVL+ Y++L L +F
Sbjct: 502 SI-RSIYSYSLYMKLFLIVLNSHNLYMEQVQMQGVTIGRAVDLSVLNGYDQLILELEKLF 560
Query: 648 GIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
I+ ++ + + D+ G GD+P+ +F K K++ I
Sbjct: 561 DIKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILI 603
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 198 bits (504), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 201/420 (47%), Gaps = 71/420 (16%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL----- 56
K+ EK++ +LW+ACAG +V +P N V+YFPQGH E S N + ++P
Sbjct: 46 KDAEKALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQLADQQMPVYNLPSK 105
Query: 57 IFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
I CRV +++ A+ +TDEV+A++ L+P P + +N + + SF KT
Sbjct: 106 ILCRVINVQLKAEPDTDEVFAQVTLLPEPIQD----ENAVKKDPPQPPPPRFHVHSFCKT 161
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A+ P P+ ++ + + + + G PRRH
Sbjct: 162 LTASDTSTHGGFSVLRRHADECLP--------PLVSINSTEFVRCLIDIIMLIPGQPRRH 213
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSC 236
LL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + G PSS +S+
Sbjct: 214 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGN---VPSSVISSH---- 266
Query: 237 VTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAA 296
+M+L ++ A +
Sbjct: 267 ------------------------SMHLG---------------------VLATAWHAIS 281
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 282 TGTLFTVYYKPRTSPAEFIVPFDRYMESVKNNYCIGMRFKMRFEGEEAPE-QRFTGTIVG 340
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
++ AD W S WR L+V WDE + RVSPW VE P ++ P P K+ R
Sbjct: 341 IEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEPALAPPALNPLPV-PRPKRPR 399
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 19/172 (11%)
Query: 528 NIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKS------SSDGHSDKVKASSDGSGS 581
N K LF P+ E SH + + +S SD S++ + S +
Sbjct: 633 NCKLFGIPLFSNPVAPEPATSHRNMVNEPTTAHPQSHQPRALESDQRSEQPRVSKMADDN 692
Query: 582 THEQRISIEKSSSSEFFWNRSFQ-VTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELY 640
HE++ S R Q T++G KV + +GR++DL+ ++Y+EL
Sbjct: 693 EHEKQFQ------SGHLHTRDIQGKTQTGSTRSCTKVHKQGIALGRSVDLAKFNNYDELI 746
Query: 641 RRLAIMFGIERSDMLSH-----VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L +F +++S ++Y D G + GD+P+ +F+ +++ I
Sbjct: 747 AELDRLFEFG-GELISPKKNWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIFI 797
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 198 bits (503), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 171/343 (49%), Gaps = 66/343 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW+ACAG +V +P + VFYFPQGH E +N S + +P I C+V ++
Sbjct: 4 ELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIYDLPYKILCKVVHVQ 63
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD---SESEKPASFAKTLTQSDA 122
A+++TDEV+A I L+P+ E + LS N G + SF K LT SD
Sbjct: 64 LKAEAKTDEVFAHITLLPVA------EGDELSSNKDGESLLLHRKTRVLSFTKKLTPSDT 117
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVP+ AE P LD + PP Q ++AKD+HG W+FRHIYRG P+RHLLT GW
Sbjct: 118 STQGGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRHLLTGGW 177
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
STF++ K++VAGDS +FLR + G+L VG+RRA K N+ + + VT +
Sbjct: 178 STFISSKRVVAGDSFIFLRGESGELRVGVRRAMK-----------LENNLSANVVTAH-- 224
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
+M L S + + +T G F
Sbjct: 225 ------------------SMQLGILSSASHAIST---------------------GSIFT 245
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
+ ++P S EF + + + + G RF M FE E+ +
Sbjct: 246 IFFHPWTSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECT 288
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 191/701 (27%), Positives = 293/701 (41%), Gaps = 163/701 (23%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE-----------HSLGSVNFPSSSRIPPLIFC 59
+LW+ CAG + +P V+YFPQGH E H + PS R C
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR------C 78
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ D TDEVYA+I L+P + + ++ D+ F+K LT
Sbjct: 79 RVVAIDRKVDKNTDEVYAQISLMP--------DTTEVMTHNTTMDTRRPIVYFFSKILTA 130
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GG +P+ A FP LD + Q +VAKD++G+ W F+H++RGTP+RH+ T
Sbjct: 131 SDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFT 190
Query: 180 T--GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
+ GWS F K+L+ GD V LR ++G+L GIRRAK G PSS ++N C+
Sbjct: 191 SGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQG---HIPSSVISAN---CM 244
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
+G V+ +V A
Sbjct: 245 ----------------------------QHG-------------------VIASVVNAFK 257
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K V Y + S+ +F + AM +++ G RF+M FE +D S + GTI V
Sbjct: 258 TKCMFNVVY-KPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE-KRYDGTIIGV 315
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
P W +S WR L+V WDE +VSPW +E + +P +S S +KK L
Sbjct: 316 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL--IPSSDISQSSLKKKKHWL 372
Query: 418 PQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKL 477
QL N +G + LS+ + G R IS +F N +
Sbjct: 373 --QL---------------NEIGAT-----LSNLWTCQEIGQRSMNSPISVPEFSYPNAI 410
Query: 478 QSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQF--- 534
+ FLS G+L +H+ LL + N N N ++ +K
Sbjct: 411 EDSKFLS-------------GLLLNHS--------LLAIPNENYNSDQMIQPRKEDITTE 449
Query: 535 -----LLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISI 589
LLFG + S S D + + S K D + S
Sbjct: 450 ATTSCLLFGVDL-----TKVSKSKDSICPI--------ESCKKSLPQDKKFDQTQPLRSP 496
Query: 590 EKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI 649
++ S+EF + RS KV ++ + R +DL+ + Y +L ++L +F +
Sbjct: 497 KEVQSTEFNFTRS-----------RIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDL 545
Query: 650 E---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
+ R+ +++ + GA GD+P+ +F AKR+ I
Sbjct: 546 KDELRTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFI 586
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 135/218 (61%), Gaps = 11/218 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IF 58
K+I+ +LW+ACAG +V +P + S V+YFPQGH+E S ++S+IP +
Sbjct: 14 RKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPSQLL 73
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C+V ++ AD +TDE++A++ L P+ + + F + L SE F K LT
Sbjct: 74 CQVHNVTLHADKDTDEIHAQMSLQPVNSEKDVFPVPDFGLKPSKHPSEF-----FCKALT 128
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE +FP LDY+ PP Q +V +D+H W FRHIYRG P+RHLL
Sbjct: 129 ASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRHIYRGQPKRHLL 188
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TTGWS FV K+L AGDS++F+R + L VG+R A +
Sbjct: 189 TTGWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHANR 226
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 130/211 (61%), Gaps = 10/211 (4%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V IP ++ VFYFPQGH E S N + RIP I CRV ++
Sbjct: 27 ELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLFNLDSKILCRVIHIE 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LAD E+DEVYA+I L+P +N+ + S++ + SF K LT SD +
Sbjct: 87 PLADHESDEVYAQITLMP-ESNQ----NEPKSMDPCPPEPPRPVVHSFCKVLTASDTSTH 141
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD T P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 142 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 201
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
V K+L AGDS VFLR +G+L VG+RR +
Sbjct: 202 VTSKRLSAGDSFVFLRGDNGELRVGVRRRAR 232
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 3/131 (2%)
Query: 288 VLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI 347
VL + A + + VVYY + T +F + + A+ + GMRF M+FE EDS
Sbjct: 251 VLATASHAVTTQTRFVVYY-KPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPER 309
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
F GTI P WPNS WR L+V WDE + RVSPW +E +++ V LS
Sbjct: 310 R-FSGTIIGAVDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLSQ 367
Query: 408 FSPARKKLRLP 418
K+ R P
Sbjct: 368 PXFKNKRPRQP 378
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/363 (35%), Positives = 181/363 (49%), Gaps = 73/363 (20%)
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPAS 112
+++ + +TDEVYA++ L+P +D N S ++ + +E S
Sbjct: 2 NIELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHS 56
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG
Sbjct: 57 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQ 116
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLL +GWS FV+ K+LVAGD+ +FLR ++G+L VG+RRA + PSS +S+
Sbjct: 117 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRA---LRHQTTIPSSVISSH 173
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
NM+L VL
Sbjct: 174 ----------------------------NMHLG----------------------VLATA 183
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
A + VYY PR S EF V +++ ++ GMRFKM FE E+++ F
Sbjct: 184 WHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAE-QRFT 242
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI + +DP W +S WR L+V WDEP + +RVSPW +E ++ H++P P
Sbjct: 243 GTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PV 299
Query: 412 RKK 414
R K
Sbjct: 300 RFK 302
Score = 39.7 bits (91), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH-VLYQDASGAIKRTG 671
KV + +GR++DL+ + Y+EL L MF + +S S V+Y D G I G
Sbjct: 626 KVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVG 685
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F ++ I
Sbjct: 686 DDPWNEFCDMVHKIFI 701
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 195 bits (496), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 131/220 (59%), Gaps = 16/220 (7%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E + +LW ACAG +V +P VFYFPQGH E S N + R+P I C
Sbjct: 14 EDDLYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILC 73
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVG-SDSESEKPA--SFAKT 116
RV + + LA+ ETDEVYA+I L+P E + + S SE +P SF K
Sbjct: 74 RVINTQLLAEQETDEVYAQITLLP--------ESDQIETTSPDPCPSEPPRPTVHSFCKV 125
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG PRRH
Sbjct: 126 LTASDTSTHGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRH 185
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
LLTTGWSTFV K+LVAGDS VFLR ++G+L VG+RR +
Sbjct: 186 LLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVAR 225
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 288 VLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL + A S VVYY PR S +F + + A+ + GMRFKM FE EDS
Sbjct: 244 VLATASHAISTLTLFVVYYKPRTS--QFIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPE 301
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHL 405
F GTI V+ P W +S WR L+V WDEP + RVSPW +E V+++P
Sbjct: 302 RR-FSGTIVGVEDFSP-HWNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLS 359
Query: 406 SPFSPARKKLRLPQQL 421
P P K+ R P ++
Sbjct: 360 QPVQPKNKRPRPPIEI 375
Score = 39.7 bits (91), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV L+ VGR +DL+++ Y +L L +F I+ ++Y D G + GD
Sbjct: 486 KVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLHPRDKWEIVYTDDEGDMMLVGD 545
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F +R+ I
Sbjct: 546 DPWPEFCNMVRRIFI 560
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 134/220 (60%), Gaps = 21/220 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL-----------GSVNFPSSSRIPPLIFC 59
+LWHACAG +V +P VFYFPQGH E L G + P +P I C
Sbjct: 5 ELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIYD-LPYKILC 63
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA---SFAKT 116
+V ++ A++ TDEV+A+I L+P+ E++ LS N G + SF K
Sbjct: 64 KVVHVELKAEAGTDEVFARITLLPVA------EEDELSSNKDGKSLPLHRKTCARSFTKK 117
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD GGFSVP+ A+ P LD + PPVQ ++AKD+HG W F+HIYRG P+RH
Sbjct: 118 LTPSDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRGQPKRH 177
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
L+T+GWSTFV+ K+LVAGDS +FLR + G+L VG+RRA K
Sbjct: 178 LITSGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMK 217
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 134/211 (63%), Gaps = 12/211 (5%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------I 57
+K I+ +LWHACAG +V +P S V+YFPQGH+E + +SRIP +
Sbjct: 32 AKKVINSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQL 91
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKT 116
C+V ++ AD +TDEVYA++ L P+ + E + + ++G+ ++S+ P F K
Sbjct: 92 LCQVHNITLHADKDTDEVYAQMTLQPV-----NSETDVFPIPTLGAYTKSKHPTEYFCKN 146
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
LT SD + GGFSVPR AE +FP+LDY+ PP Q ++ +D+H +W FRHIYRG P+RH
Sbjct: 147 LTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRH 206
Query: 177 LLTTGWSTFVNQKKLVAGDSIVFLRAQDGDL 207
LLTTGWS FV K+L AGDS++F+ G L
Sbjct: 207 LLTTGWSLFVGAKRLKAGDSVLFISMHIGVL 237
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F + Y PR S F + + A + GMRF M FETE+SS+ + GT+ +
Sbjct: 250 FTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSK-RRYTGTVVGISDY 308
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
DP+ WPNS WR LQV WDE + +RVS W +E N V S + R+ L
Sbjct: 309 DPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIETPENTLVFPSSTLNSKRQCL 363
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 131/214 (61%), Gaps = 10/214 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E + QLW ACAG V++P VFYFPQGH E S N + RIP I C
Sbjct: 11 EDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSKILC 70
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ LA+ ETDEVYA+I LVP +N+ + +S + ++ S + SF K LT
Sbjct: 71 RVVNVHLLAEQETDEVYAQITLVP-ESNQAE----PMSPDPCPAELPSPRVHSFCKVLTA 125
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A P LD + P Q +VAKD+ G W+F+HI+RG PRRHLLT
Sbjct: 126 SDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRHLLT 185
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
TGWS FV K+LVAGD+ VFLR +G+L VG+RR
Sbjct: 186 TGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRR 219
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 176/410 (42%), Gaps = 28/410 (6%)
Query: 288 VLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-S 345
VL + A + + VVYY PRAS +F V + A+ GMRFK FE ++S
Sbjct: 241 VLATASHAVATQTLFVVYYKPRAS--QFIVSVNKYLEAINQKCNVGMRFKTRFEGDESPE 298
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIH 404
F GTI V+ P W NS WR L+V WDEP RV PW +E +++++P
Sbjct: 299 NYKRFSGTIVGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTS 357
Query: 405 LSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPS--SPLCCLSDNTSAGIQGARHA 462
+ K+ R +L D P F L S + L +++ +
Sbjct: 358 SQTAAIKNKRPRQASELADLGDTPLAFPTFWDAGLTQSDMAKLSVMAEIKRSDSSSHMWH 417
Query: 463 QFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNS--SENLSCLLTMGNSN 520
SS++ N+ ++ S Q + + D I + SE L+ + +
Sbjct: 418 HNSKSSNNGISMNQTEASWLSSPSQLYHDTTDDSKSISAWPISKPHSERLNNDHFLDQVD 477
Query: 521 QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSG 580
+ + K E ++ LFG + I H+ ++ + ++ +S+ D V SD S
Sbjct: 478 KEINKVEAATSYR--LFGIDL-----IDHARNNSLSAENASGITSECKID-VNHVSDISK 529
Query: 581 STHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELY 640
++ E + S E +S QV KV ++ VGR +DL+ L Y++L
Sbjct: 530 ASKEWNQEQLQLSPKE---TQSKQVCSRSC----TKVQMQGVAVGRAVDLTTLDGYDQLV 582
Query: 641 RRLAIMFGIERSDMLSH---VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
L MF I+ L + +++ D G + GD+P+ +F K +R+ I
Sbjct: 583 DELEKMFDIKGQLQLRNKWEIVFTDDEGDMMLVGDDPWLEFCKMVRRIFI 632
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 183/403 (45%), Gaps = 80/403 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
QLW CAG + IP + V+YFPQGH E + + ++I P+ + CRV ++
Sbjct: 28 QLWKLCAGPLCDIPKIGEKVYYFPQGHIE-LIEAYTREELNKIQPIFDLPSKLQCRVIAI 86
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ + +DE YA+I L+P D + + + + SF K LT SD +
Sbjct: 87 QLKVEKNSDETYAEITLMP---------DTQVVIPTQNDNHYRPLVNSFTKVLTASDTSV 137
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSVPR A P LD + P Q ++ D+HG W+F+H YRGTPRRHLLT+GW+
Sbjct: 138 HGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTSGWNA 197
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
F KKLVAGD IVFLR + G+L VGIRRA
Sbjct: 198 FTTSKKLVAGDVIVFLRGETGELRVGIRRA------------------------------ 227
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
G+ N + S S + R ++ AV + F VV
Sbjct: 228 ---------------GHQQKNIHSSLISIDSMRHG-------VIASAVHAFNNQCMFIVV 265
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR+S +F V + A+ + G RF M FE ED S + GTI V
Sbjct: 266 YKPRSS--QFIVSYNKFVDAVNNKFNVGSRFTMRFEGEDFSE-RRYSGTIIGVNNFSS-H 321
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
W S WR L+V WDE +VSPW +E HL+P
Sbjct: 322 WMESEWRSLEVKWDEFASFPRPDKVSPWDIE--------HLTP 356
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR LDL+VL+ Y+ L L +F + ++ + ++D G K GD
Sbjct: 520 KVQMQGVPVGRALDLNVLNGYDHLIIELEKLFDLNGQLQTRNQWKIAFKDNEGNEKLVGD 579
Query: 673 EPFSDFMKSAKRLTI 687
P+ +F K++ I
Sbjct: 580 NPWPEFCSMVKKIFI 594
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 144/392 (36%), Positives = 179/392 (45%), Gaps = 70/392 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW CAG +V +P VFYFPQGH E S + + IP IFCRV +++
Sbjct: 115 ELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQ 174
Query: 66 FLADSETDEVYAKIKLVP-IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
LA+ +TDEVYA I L+P E D N+S + +K SF K LT SD +
Sbjct: 175 LLAEQDTDEVYACIALLPESDQTEPTNPDPNIS------EPPKQKFHSFCKILTASDTST 228
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q + AKD+HG WKF+HIYRG PRRHLLTTGWST
Sbjct: 229 HGGFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWST 288
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV K+L V G+ F
Sbjct: 289 FVASKRL---------------------------------------------VAGDAF-- 301
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
FLR E ++ R G L S S + VL + A + +V
Sbjct: 302 --VFLRGEHGQL-RVGVRRLARQQSPMPSSVISSQSMHLG---VLATASHAVMTRTMFLV 355
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD-PI 363
YY + T +F V + A+ + GMRFKM FE +DS F GTI V V D
Sbjct: 356 YY-KPRTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERR-FSGTI--VGVGDVSA 411
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W NS WR L+V WDEP + RVS W +E
Sbjct: 412 GWSNSQWRSLKVQWDEPATIPRPDRVSCWEIE 443
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH----VLYQDASGAIKRTG 671
KV ++ VGR DL+ LS Y++L L +F I R ++ S V + D + G
Sbjct: 683 KVQMQGVAVGRAFDLTTLSGYDDLIEELEKLFEI-RGELHSQDKWAVTFTDDENDMMLVG 741
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+ +F KR+ I
Sbjct: 742 DDPWPEFCNMVKRIFI 757
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 131/210 (62%), Gaps = 10/210 (4%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH---SLGSVNFPSSS---RIPPLIFCRVSSL 64
+LW CAG +V +P V+YFPQGH E S V+ + +PP I C V ++
Sbjct: 12 ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNV 71
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA+I L+P+ E+D +S + + + K SF+K LT SD +
Sbjct: 72 SLQAEKDTDEVYAQITLIPV-GTEVD---EPMSPDPSPPELQRPKVHSFSKVLTASDTST 127
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
GGFSV R A P LD T P Q +VA+DVHG WKF+HI+RG PRRHLLTTGWST
Sbjct: 128 HGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTGWST 187
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
FV K+LVAGD+ VFLR ++G+L VG+RRA
Sbjct: 188 FVTSKRLVAGDTFVFLRGENGELRVGVRRA 217
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 10/211 (4%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LWHACAG +V +P VFYFPQGH E S N + ++P I CRV +++
Sbjct: 22 ELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAYDLPGKILCRVVNVQ 81
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
A+ +TDEV+A+I L+P +D NL + SF KTLT SD +
Sbjct: 82 LKAEPDTDEVFAQITLLPQSE-----QDENLVEKKALPAPTRPRVHSFCKTLTASDTSTH 136
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A+ P LD + PP Q +VAKD+ G W+FRHI+RG PRRHLL +GWS F
Sbjct: 137 GGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRRHLLQSGWSLF 196
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
V+ KKLVAGD+ +FLR + G+L VG+RRA +
Sbjct: 197 VSAKKLVAGDAFIFLRGETGELRVGVRRAMR 227
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 295 AASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI 354
++G F V Y PR S EF + +++ ++ GMRFKM FE E++ F+GT+
Sbjct: 254 VSTGTMFTVYYKPRTSPAEFIIPMDKYMESVKNNFTIGMRFKMRFEAEEAPE-QRFLGTV 312
Query: 355 SSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
V+ ADP WP S WR L+V WDE L RVSPW VE
Sbjct: 313 IGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVE 353
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 178/357 (49%), Gaps = 66/357 (18%)
Query: 72 TDEVYAKIKLVPIPANEIDFE------DNNLSLNSVGSDS---ESEKPASFAKTLTQSDA 122
TDEVYA++ LV A+ + E ++ + + G D+ + P F KTLT SD
Sbjct: 40 TDEVYAQVSLV---ADNEEVERRMREGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDT 96
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY+ P Q +VAKD+HG W+FRHIYRG PRRHLLTTGW
Sbjct: 97 STHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGW 156
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
S F+N+KKLV+GD+++FLR +DG+L +G+RRA + +PF
Sbjct: 157 SGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQ-------------------LKNASPF 197
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
N+++ +++ V AVA+ + F
Sbjct: 198 PAL-------HNQISNTSSLS-----------------------EVAHAVAVKSI---FH 224
Query: 303 VVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
+ Y PR S EF + + + GMRFK+ +E+ED+S G I + ADP
Sbjct: 225 IYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASE-RRRTGIIIGSREADP 283
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
+ W S W+ L V WD+ + VSPW +EL ++ HLS R K PQ
Sbjct: 284 M-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHLSTPHSKRLKSCFPQ 339
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 145/392 (36%), Positives = 179/392 (45%), Gaps = 70/392 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW CAG +V +P VFYFPQGH E S + + IP IFCRV +++
Sbjct: 31 ELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVVNIQ 90
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LA+ +TDEVYA I L+P E N N S++ +K SF K LT SD +
Sbjct: 91 LLAEQDTDEVYACIALLP---ESDQTEPTNPDPNV--SEAPKQKFHSFCKILTASDTSTH 145
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD T P Q + AKD+HG WKF+HIYRG PRRHLLTTGWSTF
Sbjct: 146 GGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTF 205
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
V K+L V G+ F
Sbjct: 206 VASKRL---------------------------------------------VAGDAF--- 217
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
FLR E ++ R G L S S + VL + A + +VY
Sbjct: 218 -VFLRGEHGQL-RVGVRRLARQQSPMPSSVISSQSMHLG---VLATASHAVMTRTMFLVY 272
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD-PI 363
Y PR S +F V + A+ + MRFKM FE +DS F GTI V V D
Sbjct: 273 YKPRTS--QFIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPERR-FSGTI--VGVGDVSA 327
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W NS WR L+V WDEP + RVS W +E
Sbjct: 328 GWSNSQWRSLKVQWDEPATIPRPDRVSCWEIE 359
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR DL+ LS Y++L L +F I RS V + D + GD
Sbjct: 606 KVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDKWAVTFTDDENDMMLAGD 665
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F KR+ I
Sbjct: 666 DPWPEFCNMVKRIFI 680
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 130/214 (60%), Gaps = 10/214 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFC 59
E + QLW ACAG V++P VFYFPQGH E S N + RIP I C
Sbjct: 12 EDELYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLSSKILC 71
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ LA+ ETDEVYA+I LVP +N+ + S + ++ + SF K LT
Sbjct: 72 RVVNVHLLAEQETDEVYAQITLVP-ESNQTE----PTSPDPCPAELPRPRVHSFCKVLTA 126
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A P LD + P Q +VAKD+ G W+F+HI+RG PRRHLLT
Sbjct: 127 SDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFKHIFRGQPRRHLLT 186
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
TGWSTFV K+LVAGD+ VFLR +G+L VG+RR
Sbjct: 187 TGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRR 220
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 181/415 (43%), Gaps = 39/415 (9%)
Query: 288 VLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDS-S 345
VL + A + + VVYY PR S +F V + A+ GMRFKM FE ++S
Sbjct: 242 VLATASHAVATQTLFVVYYKPRTS--QFIVSVNKYLEAINQKCNVGMRFKMRFEGDESPE 299
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIH 404
F GTI V+ P W NS WR L+V WDEP RVS W +E +++ +P
Sbjct: 300 NDKRFSGTILGVEDISP-HWVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHILACVPTTS 358
Query: 405 LSPFSPARKKLRLPQQLDFPFDGQFTMPLF--SGNPLGPSSPLCCLSDNT-SAGIQGARH 461
P K+ R ++ D P F +G + L ++++ S RH
Sbjct: 359 SQPAVIKNKRPRQASEVPDLGDTPLAAPTFWDAGLTQCDMTQLRVMTESKRSDSSSHMRH 418
Query: 462 AQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNS--SENLSCLLTMGNS 519
+++ +N S +LSS Q + + D IL + SE L+ +
Sbjct: 419 HNSKSNNNGISMNQTEAS--WLSSPQLYQDTTDDNKSILAWPISKPHSERLNNDHFLDQV 476
Query: 520 NQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSD--GHSDKVKASSD 577
++N+ K E ++ LFG + + ++S S + S V + +D SD KAS +
Sbjct: 477 DKNINKVEAATSYR--LFGIDL-IDHARNNSLSVENASGVASECKTDVNHESDLSKASKE 533
Query: 578 GSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYE 637
+ EQ + K + S+ +RS KV ++ VGR +DL+ L Y+
Sbjct: 534 WN---QEQLLVSPKETQSKQVCSRSC-----------TKVQMQGVAVGRAVDLTTLDGYD 579
Query: 638 ELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
+L L MF I+ L H ++ D G + GD+P+ +F KR+ I
Sbjct: 580 QLVDELEKMFDIK--GQLQHRNKWETVFTDDEGDMMLVGDDPWPEFCNMVKRIFI 632
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 186/644 (28%), Positives = 280/644 (43%), Gaps = 106/644 (16%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS 112
+P I CRV + LA+ ETDEVYA+I L P E+D + S + + + S
Sbjct: 84 LPSKILCRVVHIHLLAEQETDEVYAQITLHP----EVD-QTEPTSPDQCTPEPQKRPVHS 138
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD + GGFSV R A P LD P Q +VAKD+HG W+F+HI+RG
Sbjct: 139 FCKILTASDTSTHGGFSVLRKHATECLPPLDMNQSIPTQELVAKDLHGYEWRFKHIFRGQ 198
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLLTTGWSTFV K+LVAG D V +R S+
Sbjct: 199 PRRHLLTTGWSTFVTSKRLVAG-----------DAFVFLR------------------SD 229
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
NG LR ++AR + +S S S VL
Sbjct: 230 NGE-------------LRVGVRRLARQQSPMPSSVISSQSMHLG-----------VLATA 265
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
+ A + + VVYY PR S +F + + A+ + GMRFKM FE EDS FM
Sbjct: 266 SHAVTTQTLFVVYYKPRTS--QFIIGLNKYLEAVNHGFSLGMRFKMRFEGEDSPERR-FM 322
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI V P W S WR L++ WDEP +Q RVSPW +E PF+ A
Sbjct: 323 GTIVGVGDFSP-EWSGSKWRSLKIQWDEPATVQRPDRVSPWEIE-----------PFA-A 369
Query: 412 RKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDF 471
+ LPQ + G+ P P+ ++ CL + +S +R GI
Sbjct: 370 SASVNLPQTV-----GKSKRP----RPVDTTASDNCLLNGSSC---SSRVRSEGIWPHSP 417
Query: 472 HVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKK 531
H++ L LF +S D + +T+ + S + +++ E+ E KK
Sbjct: 418 HMDVSL--SLF--------SDSADDNRTITTQSVISGYAPAFPSRQSNSLVHEQVEKGKK 467
Query: 532 HQ----FLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVKASSDGSGSTHEQRI 587
++ LFG + + + + + + + G + V + + +
Sbjct: 468 YENSVGCRLFGIDLISNSSTAAPPEKESLGLKMDSNGPRGSAPAVDGTDEAQNVDVSKAS 527
Query: 588 SIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
+K ++SE + + KV ++ VGR +DL+ L Y +L + L +F
Sbjct: 528 KEQKEAASEVMPKETHSKPGTTSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELF 587
Query: 648 GIERSDMLSH----VLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
I + ++ + V++ D G + GD+P+ +F K +++ I
Sbjct: 588 EI-KGELSTREKWAVVFTDDEGDMMLVGDDPWREFCKMVRKILI 630
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 144/423 (34%), Positives = 194/423 (45%), Gaps = 82/423 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSDA 122
++ +DE YA+I L+P + + + SE++ +P SF K LT SD
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVV-----------IPTQSENQFRPLVNSFTKVLTASDT 135
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGF VP+ A P LD + P Q ++AKD+HG W+FRH YRGTP+RH LTTGW
Sbjct: 136 SAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGW 195
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
+ F KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 196 NEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------I 238
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
C R+G V+ + A +
Sbjct: 239 VSIDCM---------RHG---------------------------VIASAKHALDNQCIF 262
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+V Y PR+S +F V AM ++ G RF M FE +D S +F GTI V
Sbjct: 263 IVVYKPRSS--QFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYF-GTIIGVNDFS 319
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQ 420
P W S WR L+V WDE +VSPW +E L+S + V P S K RL +
Sbjct: 320 P-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNV----PRSSLLKNKRLRET 374
Query: 421 LDF 423
L++
Sbjct: 375 LEY 377
Score = 42.4 bits (98), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ +GR +DLSVL+ Y++L L +F ++ ++ + + D+ G GD
Sbjct: 524 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGD 583
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F K K++ I
Sbjct: 584 DPWPEFCKMVKKILI 598
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 191 bits (486), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 134/223 (60%), Gaps = 19/223 (8%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----I 57
EV D +LW A AG +V +P + +VFYFPQGH E S N + RIP L I
Sbjct: 11 EVGGCSDEELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVLKLPTKI 70
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA----SF 113
CR+ ++ LA+ ETDEVYA+I LVP ++N + ++ E P SF
Sbjct: 71 LCRIVNIHLLAEQETDEVYAQITLVP---------ESNQNEPTIPDPPTEELPRPKIHSF 121
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SD + GGFSV R A P LD + P Q +VAKD+HG W+F+HI+RG P
Sbjct: 122 CKILTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQP 181
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RRHLLTTGWSTFV K+LVAGD+ VFL ++G+L VG+RR +
Sbjct: 182 RRHLLTTGWSTFVTSKRLVAGDTFVFL-GENGELRVGVRRLAR 223
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 187/429 (43%), Gaps = 67/429 (15%)
Query: 288 VLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL + A + + VVYY PR S +F V + +A+ + GMRF+M FE++DS+
Sbjct: 242 VLATASHAVATQTLFVVYYKPRTS--QFIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAE 299
Query: 347 I-SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIH 404
F GTI V+ P W NS WR L+V WDEP + RVSPW +E VS+
Sbjct: 300 SDKRFSGTIVGVEDISP-HWANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVSSASTAT 358
Query: 405 LSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGI-QGARHAQ 463
+ P + K+ R P+S + + ++A I AR +Q
Sbjct: 359 VQPTAAKTKRPR------------------------PTSEIPDVDTTSAASIFWDARMSQ 394
Query: 464 FG----ISSSDFHVNNKLQS---GLFLSSLQRFTP----NSRDFDGILTSHTNSSENLSC 512
I +S + N L++ G +LSS + P + DG S S+ S
Sbjct: 395 TDMTQRIMNSKTNNNATLRNQTEGSWLSSPRSSYPSHLLHDTTDDGKSVSAWPVSQPQSS 454
Query: 513 LLTMGNSNQNLEKSENIKKH-QFLLFG--------QPIRTEQQISHSCSDDVVSQVLGKS 563
+L + +EK ++ + LFG + E SH+ + + V+ + S
Sbjct: 455 ILNIDRMLDQVEKDNKVETATTYRLFGIDLIDHSKKSAAVEIPSSHAVNGNGVTTEVSSS 514
Query: 564 SSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESED 623
+ K SD S ++ E++ ++ S E +S Q+ KV ++
Sbjct: 515 TLSSSDTARK--SDISKASFERKQEPQQVSPKE---TQSKQICSR----SRTKVQMQGVA 565
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKRTGDEPFSDF 678
VGR +DL+ L+ Y++L L +F I+ L H +++ D G + GD+P+ +F
Sbjct: 566 VGRAVDLATLNGYDQLIGELEELFDIK--GQLQHRNTWEIVFTDDEGDMMLVGDDPWPEF 623
Query: 679 MKSAKRLTI 687
+R+ I
Sbjct: 624 CNMVRRIFI 632
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 191 bits (486), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 132/213 (61%), Gaps = 14/213 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIFCRVSSL 64
+LWHACAG +V +P V+YFPQGH E S+ PS + +P I C+V ++
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMYEGLEQQMPSFN-LPSKILCKVVNV 80
Query: 65 KFLADSETDEVYAKIKLVP-IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
A+ ETDEVYA+I L+P +E+ D+ L +S K SF KTLT SD +
Sbjct: 81 HLRAEPETDEVYAQITLLPEADQSEVTSPDDPLP------ESPRVKIHSFCKTLTASDTS 134
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R A+ P LD + PP Q +VA D+HG W FRHI+RG P+RHLLTTGWS
Sbjct: 135 THGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPKRHLLTTGWS 194
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
FV+ KKL AGD+ +FLR ++G+L VG+RR +
Sbjct: 195 VFVSSKKLAAGDAFIFLRGENGELRVGVRRVMR 227
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 168/411 (40%), Gaps = 55/411 (13%)
Query: 296 ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTIS 355
A+G F V Y PR S EF V + GMRFKM FE ++ F GTI
Sbjct: 255 ATGTLFSVFYKPRTSRSEFIVSVNKYLEVQSHKLSVGMRFKMRFEGDEIPERR-FSGTI- 312
Query: 356 SVQVADPIS---WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPA 411
V V D S WP+S WR L+V WDEP + RVS W +E LVS L+ P
Sbjct: 313 -VGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRPDRVSSWELEPLVSTT----LANSQPT 367
Query: 412 RKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDF 471
++ R + PL S + +QG + + S+ F
Sbjct: 368 QRNKR-------------------------ARPLILPSTMPDSSLQGIWKS--SVESTSF 400
Query: 472 HVNNKLQS-GLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI- 529
+ Q GL+ S +F ++ +F G + + S + + NLE I
Sbjct: 401 SYCDPQQGRGLYPSP--KFNSSATNFIGFSGNSSVGSPSNKSIYWSNRMENNLESISAIA 458
Query: 530 -----KKHQFLLFGQPIRTEQQISHSCSDDVVSQVL--GKSSSDGHSDKVKASSDG-SGS 581
+K Q G + Q + +S ++ + V G+ D + A SD S
Sbjct: 459 LKEAGEKRQGTGNGCRLFGIQLLENSNAEGNLQTVTLSGRVGDDRSVPSLDAESDQHSEP 518
Query: 582 THEQRISIEK-SSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELY 640
++ R I S +E +S Q ++S KV ++ VGR +DL+ YE+L
Sbjct: 519 SNANRSDIPSVSCDAEKSCLQSPQESQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLL 578
Query: 641 RRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
R+L MF I+ S V+Y D + GD+P+ +F +++ I
Sbjct: 579 RKLEDMFNIKTELCGSLKKWQVVYTDNEDDMMMVGDDPWDEFCSVVRKIFI 629
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 173/356 (48%), Gaps = 56/356 (15%)
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
AD +TDEVYA++ L P+ +N + L + + + F KTLT SD + GG
Sbjct: 3 ADPDTDEVYARMTLQPV-SNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGG 61
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPR AE IFPRLD++ PP Q + A+D+H +W FRHIYRG P+RHLLTTGWS FV+
Sbjct: 62 FSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 121
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
K+L+AG D + IR AK+ + G
Sbjct: 122 GKRLLAG-----------DSVLFIRDAKQQL-----------------------LLGIRR 147
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYP 307
R+ N + + + G ++ + N + F + Y P
Sbjct: 148 ANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQ------------------FTIYYNP 189
Query: 308 RASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
RAST EF + + + A+ + L GMRF+M FETE+S +MGTI+ + DP+ W
Sbjct: 190 RASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESG-TRRYMGTITGISDLDPVRWK 248
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
S WR +QV WDE + RVS W +E + I+ SP A K+ RLP D
Sbjct: 249 TSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIAPFFIYPSPLFTA-KRPRLPGMTD 303
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL +A MFGIE ++ + ++Y+D + GD+P+ DF
Sbjct: 924 VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKDVLLVGDDPWEDF 983
Query: 679 MKSAKRLTIL 688
+K + + IL
Sbjct: 984 VKCVRCIRIL 993
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 129/220 (58%), Gaps = 18/220 (8%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS------------VNFPSSSRIP 54
+I+ +LWHACAG +V +PP+ S V YFPQGH+E S + PS +P
Sbjct: 40 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPNLP 99
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFA 114
+ C + + AD +TDEVYA++ L P+ + L L+ + + F
Sbjct: 100 SKLICLLHGVNLHADPDTDEVYAQMTLQPVNT----YGKEALQLSELALKQARPQMEFFC 155
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+
Sbjct: 156 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPK 215
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLR--AQDGDLCVGIR 212
RHLLTTGWS FV+ K+L AGDS++ +R + +G+R
Sbjct: 216 RHLLTTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQDASGAIKRTGDEPFSDF 678
VGR++D+ S YEEL LA MFGIE R + ++Y+D I GD+P+ +F
Sbjct: 945 VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDDILLLGDDPWEEF 1004
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1005 VNCVRCIRIL 1014
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 332 GMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSP 391
GMRF+M FETE+ +MGTI+ + DP V WDE + RVS
Sbjct: 253 GMRFRMMFETEELG-TRRYMGTITGISDLDP------------VGWDESAAGERRNRVSI 299
Query: 392 WLVELVSNMPVIHLSPFSPARKKLRLPQQLD 422
W +E V+ + PF ++ P+QLD
Sbjct: 300 WEIEPVAAPFFLCPQPFFGVKR----PRQLD 326
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 131/203 (64%), Gaps = 8/203 (3%)
Query: 30 VFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEI 89
V Y PQGH +H LG PS + +PP +FCRV + AD+ TDEVYA++ L+P +
Sbjct: 1 VVYLPQGHLDH-LGDAPAPSPAAVPPHVFCRVVDVTLHADASTDEVYAQLSLLPENEEVV 59
Query: 90 DFEDNNLSLNSVGSDSESEK------PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLD 143
S G D E+ K P F KTLT SD + GGFSVPR AE FP LD
Sbjct: 60 RRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 119
Query: 144 YTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ 203
Y+ P Q +VAKD+HG WKFRHIYRG PRRHLLTTGWS FVN+KKLV+GD+++FLR
Sbjct: 120 YSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGD 179
Query: 204 DGDLCVGIRRAKKGIGGGNEYPS 226
DG+L +G+RRA + + G+ +P+
Sbjct: 180 DGELRLGVRRAVQ-LKNGSAFPA 201
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 128/215 (59%), Gaps = 18/215 (8%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW AG +V+IP +N V YFPQGH E S N + ++P I C+V +
Sbjct: 1 ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPXKILCQVVDTR 60
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGS----DSESEKPASFAKTLTQSD 121
LA+ ++DEVYA+I L+P + N +L S + K SF K LT SD
Sbjct: 61 LLAEQDSDEVYAQITLMP---------EANQALPSTFEPPLIECRKTKVHSFCKVLTASD 111
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD T P Q +VAKD+HG W+F+HI+RG PRRHLLTTG
Sbjct: 112 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTG 171
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
WSTFV K+LVAGDS VFLR ++G+L VG+RR +
Sbjct: 172 WSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLAR 206
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 133/227 (58%), Gaps = 18/227 (7%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLG-SVNFPSSSRIPPLIFCRVSSLK 65
S+ +LWHACAG M+ +P S V YFPQGH E + P+ IPP +FCRV +K
Sbjct: 40 SVCLELWHACAGPMICLPKKGSVVVYFPQGHLELVQDLQLLLPN---IPPHVFCRVVDVK 96
Query: 66 FLADSETDEVYAKIKLVP------IPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
A+ +DEVY ++ LVP E + + + + +S P F KTLT
Sbjct: 97 LHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPHMFCKTLTA 156
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT------- 172
SD + GGFSVPR AE FP LDY+ P Q +VAKD+HG WKFRHIYRG
Sbjct: 157 SDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGVSLMSHVW 216
Query: 173 -PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGI 218
PRRHLLTTGWS FVN+KKLV+GD+++FLRA + V I + K +
Sbjct: 217 QPRRHLLTTGWSGFVNKKKLVSGDAVLFLRASSSEFIVPIHKFLKSL 263
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 4/125 (3%)
Query: 302 EVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+ V + RAS+ EF V ++ + GMRF+M FET+D++ G I + D
Sbjct: 240 DAVLFLRASSSEFIVPIHKFLKSLDYSYSAGMRFRMRFETDDAAE-RRCAGLIVGITDVD 298
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVI-HLSPFSPARKKLRLPQ- 419
P+ WP S W+ L V WD+ + +N RVSPW +E + + +L S R ++ LP
Sbjct: 299 PVRWPGSKWKCLLVRWDDLEATRN-NRVSPWEIEPSGSASIPNNLMAASLKRTRIGLPST 357
Query: 420 QLDFP 424
QL+FP
Sbjct: 358 QLEFP 362
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 115/275 (41%), Positives = 146/275 (53%), Gaps = 55/275 (20%)
Query: 102 GSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
G + +P SF K LT SDANNG FSV CA+ +FP LDY+ P Q V +DVHG
Sbjct: 46 GQQHQQPRPVSFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGV 105
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGG 221
W F HI+RG+P+RHLLT GW+ FVN KKL GDS+VF+R +D + VG+RR + G
Sbjct: 106 EWMFCHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRTNRLFG-- 163
Query: 222 NEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGG 281
A GN + S G
Sbjct: 164 -----------------------------------AMQGNGGGPAGAVVGPS------DG 182
Query: 282 RVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFET 341
+V E V+ A LA +G FEVVYYP ++ EFCV +AVK +M +MAFET
Sbjct: 183 KVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCVSVAAVKESM----------QMAFET 232
Query: 342 EDSSR--ISWFMGTISSVQVADPISWPNSPWRLLQ 374
E+SSR +S FMGTI++V+ DP WP SPWRLL+
Sbjct: 233 EESSRVKVSLFMGTIANVEATDPAWWPESPWRLLK 267
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 161/327 (49%), Gaps = 64/327 (19%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG
Sbjct: 11 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQ 70
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLLTTGWS+FVN+KKLV+GD+++FLR DG+L +G+RRA I NE +NSN
Sbjct: 71 PRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRA---IQLKNEALLKAFNSN 127
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
+ T L AV
Sbjct: 128 SSKIHT--------------------------------------------------LSAV 137
Query: 293 ALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETED-SSRISWF 350
A + + F + Y PRA+ EF + ++ + GMRFK+ + +ED + R S
Sbjct: 138 ANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERRS-- 195
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
G I+ + DPI W S W+ L V W++ + R+SPW +E+V I S +
Sbjct: 196 -GMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVSIAQSLSAS 254
Query: 411 ARKKLRLPQQLDFPFDGQFTMPLFSGN 437
+ K+ +L Q G +P GN
Sbjct: 255 SSKRTKLCPQ------GNVDVPTLYGN 275
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 149/444 (33%), Positives = 201/444 (45%), Gaps = 83/444 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN---SVGSDSESE-KPA--SFAKTLTQ 119
++ +DE YAKI L+P D +S N + + +E++ +P SF K LT
Sbjct: 87 LKVENNSDETYAKITLMP---------DTTVSENLQVVIPTQNENQFRPLVNSFTKVLTA 137
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + G FSVP+ A P LD + P Q ++A D+HG W FRH YRGTP+RHLLT
Sbjct: 138 SDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLT 197
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
TGW+ F KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 198 TGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS------------ 242
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
C R+G V+ + A +
Sbjct: 243 --IVSIDCM---------RHG---------------------------VIASAKHAFDNQ 264
Query: 300 PFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
+V Y PR+S +F V A+ + G RF M FE +D S +F GTI V
Sbjct: 265 CMFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYF-GTIIGVS 321
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP 418
P W S WR L+V WDE +VSPW +E + MP +++ P S K RL
Sbjct: 322 NFSP-HWKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL--MPALNV-PRSSFLKNKRLR 377
Query: 419 QQLDFPFDGQFTMP--LFSGNPLG 440
+ +F +P L G +G
Sbjct: 378 EVNEFGSSSSHLLPPILTQGQEIG 401
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 127/217 (58%), Gaps = 33/217 (15%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFC 59
+K I+ QLWHACAG +V +PP+ S V YFPQGH+E S+ P+ +P + C
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
+ S+ AD+ETDEVYA++ L P+ N+++ + F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPV--NKLNRQPTEF----------------FCKTLTA 118
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYR
Sbjct: 119 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYR--------- 169
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
GWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 170 -GWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANR 205
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 66/130 (50%), Gaps = 11/130 (8%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + + PRAS EF V + A+ GMRF+M FETED + +MGT++ +
Sbjct: 237 PFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VRRYMGTVTGISD 295
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKLR 416
DP+ W S WR LQV WDE RVS W +E PVI +PF P + +
Sbjct: 296 LDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE-----PVI--TPFYICPPPFFRPK 348
Query: 417 LPQQLDFPFD 426
P+Q P D
Sbjct: 349 YPRQPGMPDD 358
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ S Y+EL LA MFGIE D L+ ++Y D I GD+P+ +F
Sbjct: 945 VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEF 1004
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1005 VNCVQNIKIL 1014
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 8/212 (3%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGH--AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLA 68
+LWHACAG V +P S + Y PQ H A+ G V ++ +PP + CRV ++ A
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAHLAADGGGGEVPPAGAAAVPPHVACRVVGVELRA 82
Query: 69 DSETDEVYAKIKLVP----IPANEIDFEDNNLSLNSVGSDSESEK--PASFAKTLTQSDA 122
D+ TDEVYA++ LV + N + + + G D+E + P F KTLT SD
Sbjct: 83 DAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTASDT 142
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVPR AE FP LDY P Q ++A D+HG WKFRHIYRG PRRHLLT GW
Sbjct: 143 STHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTIGW 202
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
S+FVN+KKLV+GD+++FLR DG L +G+RRA
Sbjct: 203 SSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRA 234
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
+L +VA + K F + + PR+ EF V + ++ + GMRF++ +E+ED++
Sbjct: 255 ILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANE 314
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIHL 405
S G IS + DPI WP S W+ L V WD+ + RVSPW +E V ++ V H
Sbjct: 315 RS--AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHS 372
Query: 406 SPFSPARKKLRLPQ-QLDFPF 425
R KL PQ LD PF
Sbjct: 373 LSSGSKRTKLHFPQGSLDTPF 393
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 150/467 (32%), Positives = 209/467 (44%), Gaps = 88/467 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSDA 122
++ +DE+YA+I L+P + + + SE+ +P SF K LT SD
Sbjct: 87 LKVENNSDEIYAEITLMPDTTQVV-----------IPTQSENRFRPLVNSFTKVLTASDT 135
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVP+ A P LD + P Q ++A D+H W+FRH YRGTP+RH LTTGW
Sbjct: 136 SAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGW 195
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
+ F+ KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 196 NEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------I 238
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
C R+G V+ + A +
Sbjct: 239 VSIDCM---------RHG---------------------------VIASAKHAFDNQCIF 262
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+V Y PR+S +F V A+ + G RF M FE +D S +F GTI V
Sbjct: 263 IVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDFS 319
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
P W S WR L+V WDE +VSPW +E + +P +++ P S K RL +
Sbjct: 320 P-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALNV-PRSSLLKNKRLREVN 375
Query: 422 DFPFDGQFTMP--LFSGNPLGP---SSPLCC---LSDNTSAGIQGAR 460
+F +P L G +G +SP+ D T A + +R
Sbjct: 376 EFGSSSSHLLPPILTQGQEIGQLSVASPMNISLRYRDTTEAAMNPSR 422
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ +GR +DLSVL+ Y++L L +F I+ ++ + + D+ G GD
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGD 574
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F K K++ I
Sbjct: 575 DPWPEFCKMVKKILI 589
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 185 bits (470), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 144/438 (32%), Positives = 194/438 (44%), Gaps = 76/438 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE YAKI L+P + + + + + SF K LT SD +
Sbjct: 87 LKVENNSDETYAKITLMP--------DTTQVVIPTQNENQFRPLVNSFTKVLTASDISAN 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
G FSVP+ A P LD + P Q ++A D+HG W FRH YRGTP+RHLLTTGW+ F
Sbjct: 139 GVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 199 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------IVSI 241
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
C R+G V+ + A + +V
Sbjct: 242 DCM---------RHG---------------------------VIASAKHAFDNQCMFIVV 265
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR+S +F V A+ + G RF M FE +D S +F GTI V P
Sbjct: 266 YKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYF-GTIIGVSNFSP-H 321
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
W S WR L+V WDE +VSPW +E + MP +++ P S K RL + +F
Sbjct: 322 WKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL--MPALNV-PRSSFLKNKRLREVNEFG 378
Query: 425 FDGQFTMP--LFSGNPLG 440
+P L G +G
Sbjct: 379 SSSSHLLPPILTQGQEIG 396
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 185 bits (469), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 148/467 (31%), Positives = 207/467 (44%), Gaps = 86/467 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 39 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIH 98
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSDA 122
++ +DE+YA+I L+P + + + SE+ +P SF K LT SD
Sbjct: 99 LKVENNSDEIYAEITLMPDTTQVV-----------IPTQSENRFRPLVNSFTKVLTASDT 147
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSVP+ A P LD + P Q ++A D+H W+FRH YRGTP+RH LTTGW
Sbjct: 148 SAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGW 207
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
+ F+ KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 208 NEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------I 250
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
C R+G V+ + A +
Sbjct: 251 VSIDCM---------RHG---------------------------VIASAKHAFDNQCIF 274
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+V Y P + +F V A+ + G RF M FE +D S +F GTI V
Sbjct: 275 IVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSERRYF-GTIIGVSDFS 333
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQL 421
P W S WR L+V WDE +VSPW +E + +P +++ P S K RL +
Sbjct: 334 P-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALNV-PRSSLLKNKRLREVN 389
Query: 422 DFPFDGQFTMP--LFSGNPLGP---SSPLCC---LSDNTSAGIQGAR 460
+F +P L G +G +SP+ D T A + +R
Sbjct: 390 EFGSSSSHLLPPILTQGQEIGQLSVASPMNISLRYRDTTEAAMNPSR 436
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ +GR +DLSVL+ Y++L L +F I+ ++ + + D+ G GD
Sbjct: 529 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGD 588
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F K K++ I
Sbjct: 589 DPWPEFCKMVKKILI 603
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 188/419 (44%), Gaps = 74/419 (17%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE YAKI L+P + + + + + SF K LT SD +
Sbjct: 87 LKVENNSDETYAKITLMP--------DTTQVVIPTQNENQFRPLVNSFTKVLTASDISAN 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
G FSVP+ A P LD + P Q ++A D+HG W FRH YRGTP+RHLLTTGW+ F
Sbjct: 139 GVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 199 TTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------IVSI 241
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVY 305
C R+G V+ + A + +V
Sbjct: 242 DCM---------RHG---------------------------VIASAKHAFDNQCMFIVV 265
Query: 306 Y-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y PR+S +F V A+ + G RF M FE +D S +F GTI V P
Sbjct: 266 YKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSERRYF-GTIIGVSNFSP-H 321
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF 423
W S WR L+V WDE +VSPW +E + MP +++ P S K RL + +F
Sbjct: 322 WKCSDWRSLEVQWDEFASFLRPNKVSPWEIEHL--MPALNV-PRSSFLKNKRLREVNEF 377
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 9/210 (4%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFC 59
E +I +LWHACAG +V +P + VFYFPQGH E S N + + +P + C
Sbjct: 38 EAAIYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLC 97
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ A+ +TDEVYA+I L+P P + ++N + + + SF KTLT
Sbjct: 98 RVINVDLKAEVDTDEVYAQITLLPEP----NQDENAVEKEAPPPPPPRFQVHSFCKTLTA 153
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSV R A+ P LD + PP Q +VAKD+H W+FRHI+RG PRRHLL
Sbjct: 154 SDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPRRHLLQ 213
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCV 209
+GWS FV+ K+LVAGD+ +FLR + V
Sbjct: 214 SGWSVFVSSKRLVAGDAFIFLRTSPSEFIV 243
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S EF V +++ ++ GMRFKM FE E++ F GTI ++ +DP W
Sbjct: 235 RTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEDSDPTRWAK 293
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
S WR L+V WDE + +RVSPW +E P LSP R K
Sbjct: 294 SKWRSLKVRWDETSSIPRPERVSPWKIEPALAPPA--LSPVPMTRPK 338
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 133/218 (61%), Gaps = 12/218 (5%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRI---PPLIFCRVS 62
K +D ++W AG +IP LNS VFYFP GH EH+ S N + S I P+I C VS
Sbjct: 7 KRVDREIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLINSYRPIIPCVVS 66
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEI-DFEDNNLSLNSVGSDSESEKPASFAKTLTQSD 121
+ LAD +TDEV+AK+ L PI + + + ++ + N G D + KTLTQSD
Sbjct: 67 DVDLLADLQTDEVFAKLILTPITNDSVHEPQEPEVRENEHGGD----RLVFSGKTLTQSD 122
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
ANNGG FSVP CA+ IFP LD T+ P Q + KD+H +W FRH YRG+P+RHL+TT
Sbjct: 123 ANNGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLITTK 182
Query: 182 WSTFVNQKKLVAGDSIVFL----RAQDGDLCVGIRRAK 215
WS FV+ KK++ GDS+V + + +GIRR K
Sbjct: 183 WSKFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHK 220
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 13/199 (6%)
Query: 280 GGRVKPEMVLEAVALAASGKPFEVVYYPRAST-PEFCVKASAVKAAMRVHWLCGMRFKMA 338
++ + V+EA LA FEV+YYP AS F V A AVK AM+++W GMR K
Sbjct: 224 AAKITEKSVMEAAELADKNMTFEVIYYPTASHWCNFVVDAEAVKKAMQINWQSGMRVKHC 283
Query: 339 FETEDSS-RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
+T++SS R S F GT+S++ +DP + PWR+LQV WDE ++ QN +VSPW +EL+
Sbjct: 284 LKTDESSKRSSIFQGTVSAL--SDP---SHHPWRMLQVNWDESEVSQNPSQVSPWQIELI 338
Query: 398 SNMPVIHLSPFSPARKKLRLPQQLDFPFDGQF-TMPLFSGNPLGPSSPLCCLSDNTSAGI 456
S+ P + L P +KKLR+ + + ++P N P+S C D +
Sbjct: 339 SHTPALPLQ--FPPQKKLRIAHVSALSTNIERPSIPEIEFNFFNPASMNC---DAFLNSM 393
Query: 457 QGARHAQFGISSSDFHVNN 475
QG R F S+S +N+
Sbjct: 394 QGTRPNLFSASTSSTSLND 412
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 131/221 (59%), Gaps = 12/221 (5%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIF 58
E + +LW+ CAG +V +P + V+YFPQGH E S N + +P I
Sbjct: 35 TEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKIL 94
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES---EKPASFAK 115
C V +++ A+ + DEVYA++ L+P E E+N S S + + SF K
Sbjct: 95 CEVMNVELKAEPDNDEVYAQLTLLP----ESKPEENGSSEEMPASPPAALARPRVHSFCK 150
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRR 175
TLT SD + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRR
Sbjct: 151 TLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQPRR 210
Query: 176 HLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
HLL +GWS FV+ K+LVAGD+ +FLR G+L VG+RRA +
Sbjct: 211 HLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMR 251
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 280 TGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQR-FTGTIVG 338
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKK 414
D W S WR L+V WDE + +RVSPW +E VS P+ L P R +
Sbjct: 339 NVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 397
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 194/423 (45%), Gaps = 90/423 (21%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRI---PPLIFCRVS 62
+ +D ++W AG V+IP + S V+YF +GH EH+ S N + + PP + C +S
Sbjct: 7 RRVDSKIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSSPNIETELLLCLRPPSVLCIIS 66
Query: 63 SLKFLADSETDEVYAKIKLVPIPAN---------EIDFED------NNLSLNSVG----- 102
S+ LA+ TDEV+AK+ L P+ + DF D NNL +
Sbjct: 67 SVDLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPAPPE 126
Query: 103 ----SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDV 158
D +S S+ K LTQSD +G VPR C E IFP LD + + D+
Sbjct: 127 VPDEEDDDSNNLVSYVKILTQSDTQSG--LFVPRECMELIFPNLDLEDPMQSEKLSVTDI 184
Query: 159 HGEIWKFRHIYRGTP-RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG 217
+W +++ Y + TTGWS FV +KKLVA DS+VF++ G + VGI R
Sbjct: 185 QDVVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRKAM- 243
Query: 218 IGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTR 277
YP++ EEE
Sbjct: 244 ------YPAT-----------------------EEEG----------------------- 251
Query: 278 GNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKM 337
G + + V +AV LA F+VVYYP A+ +F V AS V AM+ W GM K+
Sbjct: 252 GKSENLTEKAVKDAVELAGKNMAFQVVYYPTANWCDFVVDASVVDEAMKNGWEFGMGIKL 311
Query: 338 AFE--TEDSSRISWFM--GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWL 393
+S+ +++ GTIS++ P + P+ WR+LQV WD PD+ QN RV+PW
Sbjct: 312 RLNEFASSNSKKTYYQPKGTISNMSNV-PSNVPS--WRMLQVNWDGPDISQNPNRVNPWQ 368
Query: 394 VEL 396
V++
Sbjct: 369 VDI 371
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 127/211 (60%), Gaps = 16/211 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL-----IFCRVSSLK 65
+LW ACAG +V IP ++ VFYFPQ S N + RIP I CRV ++
Sbjct: 30 ELWRACAGPLVDIPRVDERVFYFPQQ------ASTNLELNKRIPLFNLDSKILCRVIHIE 83
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
LAD E+DEVYA+I L+P +N+ + S++ + SF K LT SD +
Sbjct: 84 PLADHESDEVYAQITLMP-ESNQ----NEPKSMDPCPPEPPRPVVHSFCKVLTASDTSTH 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSV R A P LD T P Q +VAKD+HG W+F+HI+RG PRRHLLTTGWSTF
Sbjct: 139 GGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
V K+L AGDS VFLR +G+L VG+RR +
Sbjct: 199 VTSKRLSAGDSFVFLRGDNGELRVGVRRRAR 229
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 185/455 (40%), Gaps = 63/455 (13%)
Query: 288 VLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI 347
VL + A + + VVYY + T +F + + A+ + GMRF M+FE EDS
Sbjct: 248 VLATASHAVTTQTRFVVYY-KPRTCQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPER 306
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSP 407
F GTI P WPNS WR L+V WDE + RVSPW +E +++ V LS
Sbjct: 307 R-FSGTIIGAVDISP-HWPNSSWRSLRVQWDEQTSILRPDRVSPWDIEPLTSSAVTGLS- 363
Query: 408 FSPARKKLRLPQQLDFPFDG-QFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGI 466
P K R P+Q DG T P + L S S N + G +G +
Sbjct: 364 -QPISKNKR-PRQPTPAHDGADLTKPTHWDSGLAQSHDGKQCS-NAAEGRKGENNESCHH 420
Query: 467 SSSDFHVN----NKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNS--- 519
+D N ++ Q+ +LS Q + D S T S + LL S
Sbjct: 421 RETDTISNSSCVSRTQTDTWLSPTQSNSYKHPVNDMAQDSKTVPSSGWTFLLGTPTSHLV 480
Query: 520 ----NQNLEKSENIKKHQFL----LFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDK 571
+Q L+ E+ KK + + LFG ++H L +
Sbjct: 481 KLSDDQILDPIESGKKGETVASCRLFG------IDLNH----------LAAEKASSQPSS 524
Query: 572 VKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC------------KVFL 619
+ +DG ST S KS + E R +++++ L C KV +
Sbjct: 525 GSSDTDGRISTLSVAQSDPKSDNLEVSIERKSELSQASLKEIQCNQSSSANTRSRTKVLM 584
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPF 675
VGR +DL++L Y++L L MF + R + + ++Y D G + GD+P+
Sbjct: 585 HGMAVGRAVDLTILEGYDQLIDELEKMFDV-RGQLCARDKWEIVYTDDEGDMMLVGDDPW 643
Query: 676 SDFMKSAKRLTIL-------MGSGSDSVGRTWITG 703
+F +R+ I M SGS + + G
Sbjct: 644 EEFRNMVRRIFICSKEQVKNMSSGSKQLTSIEVEG 678
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 171/366 (46%), Gaps = 66/366 (18%)
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFA 114
P I CRV ++ A+ +TDEV+A++ LVP P + +N + + + SF
Sbjct: 8 PKILCRVINVMLKAEPDTDEVFAQVTLVPEPNQD----ENAVEKEAPPAPPPRFHVHSFC 63
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 64 KTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPR 123
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHLL +GWS FV+ K+LVA GD + +R NG
Sbjct: 124 RHLLQSGWSVFVSSKRLVA-----------GDAFIFLR------------------GENG 154
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
G M + GN+ + S + M L +A
Sbjct: 155 ELRVGV------------RRAMRQQGNVPSSVISSHS---------------MHLGVLAT 187
Query: 295 A----ASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWF 350
A +G F V Y PR S EF V +++ ++ GMRFKM FE E++ F
Sbjct: 188 AWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE-QRF 246
Query: 351 MGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
GTI ++ +D WP S WR L+V WDE + +RVSPW +E P ++ P P
Sbjct: 247 TGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPALNPLPM-P 305
Query: 411 ARKKLR 416
K+ R
Sbjct: 306 RPKRPR 311
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 132/215 (61%), Gaps = 22/215 (10%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS----------RIPPLIFCR 60
+LW ACAG +V++P VFYF QGH E + P+ S ++P I C+
Sbjct: 73 ELWRACAGPLVEVPQRGERVFYFLQGHLEQ----LQEPTDSALLAEQIKMFQVPYKILCK 128
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLT 118
V +++ A++ETDEVYA+I L P D + ++L L + E+ +P +F K LT
Sbjct: 129 VVNVELKAETETDEVYAQITLQP------DADQSDLPLILDPTLPETPRPVVHTFCKILT 182
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSV R A P LD T P Q +++KD+HG W+F+HIYRG PRRHLL
Sbjct: 183 PSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRRHLL 242
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
TTGWSTFV KKL+AGD+ V+LR++ G+ VG+RR
Sbjct: 243 TTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRR 277
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 288 VLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL + + A VVYY PR S ++ V + A + + GMRF+M FE ED
Sbjct: 299 VLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVP- 357
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQN-VKRVSPWLVE 395
+ F GTI P W S W+ L+V WD+ + N +RVSPW ++
Sbjct: 358 VKKFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 406
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLY 660
R Q +S + KV + VGR +DL+ L YE L L MF I+ V +
Sbjct: 648 REIQSQQSSIGRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKDIKQNFKVAF 707
Query: 661 QDASGAIKRTGDEPFSDFMKSAKRLTI 687
D G + GD+P+ +F + +++ I
Sbjct: 708 NDNEGDTMKVGDDPWMEFCRMVRKIVI 734
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 129/226 (57%), Gaps = 21/226 (9%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIF 58
E + +LW+ CAG +V +P + V+YFPQGH E S N + +P I
Sbjct: 35 TEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKIL 94
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA------- 111
C V +++ A+ + DEVYA++ L+P E N + + PA
Sbjct: 95 CEVMNVELKAEPDNDEVYAQLTLLP--------ESKQPEENGSSEEMPASPPAALARPRV 146
Query: 112 -SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
SF KTLT SD + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+R
Sbjct: 147 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFR 206
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
G PRRHLL +GWS FV+ K+LVAGD+ +FLR G+L VG+RRA +
Sbjct: 207 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMR 252
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 281 TGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQR-FTGTIVG 339
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKK 414
D W S WR L+V WDE + +RVSPW +E VS P+ L P R +
Sbjct: 340 NVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 398
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 138/224 (61%), Gaps = 14/224 (6%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHS-------LGSVNFPSSSRIPPLIFCR 60
+ P++WH CA + V+IP L+S V+YFPQGH E++ + +F S R P C
Sbjct: 10 VRPEIWHTCATAAVKIPKLHSRVYYFPQGHLENASPSSSSITHTHSFLQSFR--PFTLCI 67
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
VS++ LAD TDEV+ K+ L PI N++ E+ + ++ +E SF KTLT+S
Sbjct: 68 VSAVDLLADPHTDEVFVKLLLTPI-TNDVHLENPKEEVANLNDRNEV---VSFVKTLTRS 123
Query: 121 DANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL-T 179
D NN F +PR+CA+ +FP+LD A+ Q + DVHGE+ KF H+ RG P+R++L
Sbjct: 124 DVNNARSFHIPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNMLYI 183
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNE 223
+ W++FV +KKLVAGDS++F++ G + VGIRR + + E
Sbjct: 184 SEWNSFVKRKKLVAGDSVIFMKDSTGKIFVGIRRNTQFVAAAAE 227
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 196/442 (44%), Gaps = 87/442 (19%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQG+ E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSDA 122
++ +DE YA+I L+P + + + SE++ +P SF K LT SD
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVV-----------IPTQSENQFRPLVNSFTKVLTASDT 135
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGF VP+ A P L P Q ++AKD+HG W+FRH YRGTP+RH LTTGW
Sbjct: 136 SAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGW 191
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
+ F KKLV GD IVF+R + G+L VGIRRA+ G PSS
Sbjct: 192 NEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGN---IPSS--------------I 234
Query: 243 GGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFE 302
C R+G V+ + A +
Sbjct: 235 VSIDCM---------RHG---------------------------VIASAKHALDNQCIF 258
Query: 303 VVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVAD 361
+V Y P + +F V AM ++ G RF M FE +D S +F GTI V
Sbjct: 259 IVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSERRYF-GTIIGVNDFS 317
Query: 362 PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQ 420
P W S WR L+V WDE +VSPW +E L+S + V P S K RL +
Sbjct: 318 P-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNV----PRSSLLKNKRLREV 372
Query: 421 LDFPFDGQFTMPLFSGNPLGPS 442
+F GQ L +P+ S
Sbjct: 373 NEF---GQEIGQLSVASPMNTS 391
Score = 42.4 bits (98), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ +GR +DLSVL+ Y++L L +F ++ ++ + + D+ G GD
Sbjct: 499 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYEMLVGD 558
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F K K++ I
Sbjct: 559 DPWPEFCKMVKKILI 573
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 181 bits (460), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 127/212 (59%), Gaps = 16/212 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSS 63
+LW ACAG +V++P + VFYF QGH E L P+ ++P I C+V +
Sbjct: 18 ELWRACAGPLVEVPQRDERVFYFLQGHLEQ-LQEPTDPALLAEQIKMFQVPYKILCKVVN 76
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSD 121
++ A++ETDEV+A+I L P P E NL E +P SF K LT SD
Sbjct: 77 VELKAETETDEVFAQITLQPDPDQE------NLPTLPDPPLPEQPRPVVHSFCKILTPSD 130
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTG
Sbjct: 131 TSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 190
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
WSTFV KKL++GD+ V+LR++ G+ VG+RR
Sbjct: 191 WSTFVTSKKLISGDAFVYLRSETGEQRVGVRR 222
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 127/212 (59%), Gaps = 16/212 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSS 63
+LW ACAG +V++P + VFYF QGH E L P+ ++P I C+V +
Sbjct: 14 ELWRACAGPLVEVPQRDERVFYFLQGHLEQ-LQEPTDPALLAEQIKMFQVPYKILCKVVN 72
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSD 121
++ A++ETDEV+A+I L P P E NL E +P SF K LT SD
Sbjct: 73 VELKAETETDEVFAQITLQPDPDQE------NLPTLPDPPLPEQPRPVVHSFCKILTPSD 126
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTG
Sbjct: 127 TSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 186
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
WSTFV KKL++GD+ V+LR++ G+ VG+RR
Sbjct: 187 WSTFVTSKKLISGDAFVYLRSETGEQRVGVRR 218
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 137/402 (34%), Positives = 187/402 (46%), Gaps = 78/402 (19%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS---RIPPLIFCRVSSL 64
+DP++W CAG V+IP ++S V+YFP+GH EH+ S + + R I C VSS+
Sbjct: 9 VDPKIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRSSIPCIVSSV 68
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
D TDEV+AK+ L P+ E + D + + S+ KTLTQSD
Sbjct: 69 DLFVDPHTDEVFAKLLLTPVTDQE-----PPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR 123
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
VP C+ IFP+LD Q++ D+ + + + Y + R H TGW
Sbjct: 124 --VLCVPIECSNLIFPKLDLDKS---QSITVTDLKNQERGYTYTYSNSSRLH---TGWLN 175
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV +KKLVA DS+VF++ G + VGIRR K
Sbjct: 176 FVREKKLVANDSVVFIKNSAGKISVGIRRKTK---------------------------- 207
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
F +E A G+ NL +K VL+A LA F+VV
Sbjct: 208 ---FTTDE----ADEGSENLTD---------------EIK---VLDAAELAEKNTAFDVV 242
Query: 305 YYPRAST-PEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR----ISWFMGTISSVQV 359
YYP AS +F V A V AM++ W GMR K+ + +SS IS GTIS V
Sbjct: 243 YYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISFVYN 302
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMP 401
+ PN WR+L+V WD D+ QN V+PW VE V N+P
Sbjct: 303 HSS-NVPN--WRMLEVNWDGLDIPQNPNLVNPWQVE-VYNIP 340
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 126/211 (59%), Gaps = 16/211 (7%)
Query: 12 LWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSSL 64
LW ACAG +V++P + VFYF QGH E L P+ ++P I C+V ++
Sbjct: 19 LWRACAGPLVEVPQRDERVFYFLQGHLEQ-LQEPTDPALLAEQIKMFQVPYKILCKVVNV 77
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDA 122
+ A++ETDEV+A+I L P P E NL E +P SF K LT SD
Sbjct: 78 ELKAETETDEVFAQITLQPDPDQE------NLPTLPDPPLPEQPRPVVHSFCKILTPSDT 131
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTGW
Sbjct: 132 STHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTGW 191
Query: 183 STFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
STFV KKL++GD+ V+LR++ G+ VG+RR
Sbjct: 192 STFVTSKKLISGDAFVYLRSETGEQRVGVRR 222
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 16/212 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSS 63
+LW ACAG +V++P N VFYF QGH E L P+ ++P I C+V +
Sbjct: 15 ELWRACAGPLVELPQTNERVFYFLQGHLEQ-LQEPTDPALLAEQIKMFQVPNKILCKVVN 73
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSD 121
++ A++ETDE+YA+I L P P +++D L E+ +P SF K LT SD
Sbjct: 74 VELKAETETDEMYAQITLQPEP-DQVD-----LPQLPEPPLQETSRPVVHSFCKILTPSD 127
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTG
Sbjct: 128 TSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 187
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
WSTFV KKL+AGD+ V+LR++ G VG+RR
Sbjct: 188 WSTFVTSKKLIAGDAFVYLRSETGQQRVGVRR 219
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 161/423 (38%), Gaps = 50/423 (11%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S ++ V+ + + ++ + GMRFKM+FE +D I F GT+
Sbjct: 255 FLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVP-IKKFSGTVVDKGDL 313
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQ 419
P W S W+ L+V WDE L +RVS W +E ++ P I + P P+ K R P+
Sbjct: 314 SP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITM-PVQPSMKNKR-PR 370
Query: 420 QLDFPFDGQFTMPL----FSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
+ D P SG P S+ + A + SS N+
Sbjct: 371 ETAEGLDIHALEPAQEFWLSGRPEQHEKTSVSSSEPKHQVAWTSERAGYSAMSSSICQNS 430
Query: 476 KLQSGLF--------LSSL-----QRFTPNSRD-----FDGILTSHTNS-SENLSCLLTM 516
+ F L SL + F S D + G+ H + S LSC +
Sbjct: 431 AVTGSWFKGFNSSGSLPSLPEISQKLFQVTSNDARVPPWPGLSAYHADEPSSKLSCNTAL 490
Query: 517 GNSN--------QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGH 568
+ N + E + F LFG + I+H+ S S K+S
Sbjct: 491 CSYQTEEVAPRFSNAVEEEKKEPGMFRLFGVNL-----INHARS----SATADKTSVGAG 541
Query: 569 SDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTL 628
+A+ S R++ + + R Q +S KV + DV R +
Sbjct: 542 ETSARAAGSFEDSAQLSRVTKDHTHMVNGS-PREIQSHQSCSGRSRIKVQMHGNDVCRAV 600
Query: 629 DLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKR 684
DL L YE+L + MF I+ + V + + G P+ +F + ++
Sbjct: 601 DLGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRK 660
Query: 685 LTI 687
+ I
Sbjct: 661 IVI 663
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 16/212 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSS 63
+LW ACAG +V++P N VFYF QGH E L P+ ++P I C+V +
Sbjct: 15 ELWRACAGPLVELPQTNERVFYFLQGHLEQ-LQEPTDPALLAEQIKMFQVPNKILCKVVN 73
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSD 121
++ A++ETDE+YA+I L P P +++D L E+ +P SF K LT SD
Sbjct: 74 VELKAETETDEMYAQITLQPEP-DQVD-----LPQLPEPPLQETSRPVVHSFCKILTPSD 127
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTG
Sbjct: 128 TSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 187
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
WSTFV KKL+AGD+ V+LR++ G VG+RR
Sbjct: 188 WSTFVTSKKLIAGDAFVYLRSETGQQRVGVRR 219
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 159/423 (37%), Gaps = 50/423 (11%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S ++ V+ + + ++ + GMRFKM+FE +D I F GT+
Sbjct: 255 FLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVP-IKKFSGTVVDKGDL 313
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQ 419
P W S W+ L+V WDE L +RVS W +E ++ P I + P P+ K R P+
Sbjct: 314 SP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITM-PVQPSMKNKR-PR 370
Query: 420 QLDFPFDGQFTMPL----FSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNN 475
+ D P SG P S+ + A + SS N+
Sbjct: 371 ETAEGLDIHALEPAQEFWLSGRPEQHEKTSVSSSEPKHQVAWTSERAGYSAMSSSICQNS 430
Query: 476 KLQSGLFLS-------------SLQRFTPNSRD-----FDGILTSHTNS-SENLSCLLTM 516
+ F S + F S D + G+ H + S LSC +
Sbjct: 431 AVTGSWFKGFNSSGSHPSLPEISQKLFQVTSNDARVPPWPGLSAYHADEPSSKLSCNTAL 490
Query: 517 GNSN--------QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGH 568
+ N + E + F LFG + I+H+ S S K+S
Sbjct: 491 CSYQTEEVAPRFSNAVEEEKKEPGMFRLFGVNL-----INHARS----SATADKTSVGAG 541
Query: 569 SDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTL 628
+A+ S R++ + + R Q +S KV + DV R +
Sbjct: 542 ETSARAAGSFEDSAQLSRVTKDHTHMVNGS-PREIQSHQSCSGRSRIKVQMHGNDVCRAV 600
Query: 629 DLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKR 684
DL L YE+L + MF I+ + V + + G P+ +F + ++
Sbjct: 601 DLGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRK 660
Query: 685 LTI 687
+ I
Sbjct: 661 IVI 663
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 133/397 (33%), Positives = 184/397 (46%), Gaps = 77/397 (19%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSS---RIPPLIFCRVSSL 64
+DP++W C G V+IP ++S V+YFP+GH EH+ S + + R I C VSS+
Sbjct: 9 VDPKIWQICVGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILDRYRSSIPCIVSSV 68
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
D TDEV+AK+ L P+ E + D + + S+ KTLTQSD
Sbjct: 69 DLFVDPHTDEVFAKLLLTPVTDQE-----PPPPVVPGQEDDDGDNLVSYVKTLTQSDCTR 123
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWST 184
VP C+ IFP+LD Q++ D+ + W++ + Y + R H TGW
Sbjct: 124 --VLCVPIECSNLIFPKLDLDKS---QSITVTDLKNQEWRYTYTYSNSSRLH---TGWLN 175
Query: 185 FVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGG 244
FV +KKLVA DS+VF++ G + VGIRR K
Sbjct: 176 FVREKKLVANDSVVFIKNSAGKISVGIRRNTK---------------------------- 207
Query: 245 FSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVV 304
F +E A G+ NL +K VL+A LA F+VV
Sbjct: 208 ---FTTDE----AAEGSENLT---------------DEIK---VLDAAELAEKNTAFDVV 242
Query: 305 YYPRAST-PEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR----ISWFMGTISSVQV 359
YYP AS +F V A V AM++ W GMR K+ + +SS IS GTIS V
Sbjct: 243 YYPTASGWRDFVVDAKTVDDAMKIGWKSGMRVKLPLKKYESSNSKMTISQLKGTISFV-F 301
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVEL 396
+ PN WR+L+V WD D+ Q V+PW VE+
Sbjct: 302 NHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVEV 336
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 179 bits (455), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 16/212 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSS 63
+LW ACAG +V++P + VFYF QGH E L P+ ++P I C+V +
Sbjct: 12 ELWRACAGPLVELPQTDERVFYFLQGHLEQ-LQEPTDPALLADQIKMFQVPNKILCKVVN 70
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSD 121
++ A++ETDE+YA+I L P P + +L E+ +P SF K LT SD
Sbjct: 71 VELKAETETDEMYAQITLQPEP------DQMDLPTLPDPPLPETSRPVVHSFCKILTPSD 124
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTG
Sbjct: 125 TSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 184
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
WSTFV KKL+AGD+ V+LR++ G+ VG+RR
Sbjct: 185 WSTFVTSKKLIAGDAFVYLRSETGEQRVGVRR 216
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S ++ V + + ++ + GMRFKM+FE ED + F GT+
Sbjct: 252 FLVYYRPRLSQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVP-VKKFSGTVVDKGDL 310
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLR 416
P W S W+ L+V WDE +RVS W +E ++ P I++ P P+ K R
Sbjct: 311 SP-HWQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINI-PVQPSMKNKR 365
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 148/298 (49%), Gaps = 58/298 (19%)
Query: 131 PRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKK 190
PR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGWS FVN+KK
Sbjct: 1 PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKK 60
Query: 191 LVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLR 250
LV+GD+++FLR DG+L +G+RRA + +C N +S L
Sbjct: 61 LVSGDAVLFLRTADGELRLGVRRAAQA----------------KTC--SNYLAAYSQLL- 101
Query: 251 EEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRAS 310
N SG +++ V +S F + Y PRAS
Sbjct: 102 --------------------NVSG-------------IVDVVNAISSTNAFSICYNPRAS 128
Query: 311 TPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPW 370
+ F + + + GMRFKM ETED++ F G + V DP+ WP S W
Sbjct: 129 SSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAE-QRFTGLVVGVSDVDPVRWPGSKW 187
Query: 371 RLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP---QQLDFPF 425
R L V WD+ D+ ++ RVSPW +E + PV S P+ K+ R+ + DFP
Sbjct: 188 RCLLVRWDDLDVSRH-NRVSPWEIEPSGSAPVSS-SLVMPSAKRTRVGFPITKADFPI 243
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/344 (36%), Positives = 165/344 (47%), Gaps = 72/344 (20%)
Query: 131 PRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKK 190
PR AE FP LDY P Q +VAKD+HG WKFRHIYRG PRRHLLTTGWS FVN+KK
Sbjct: 1 PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKK 60
Query: 191 LVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLR 250
LV+GD+++FLR DG+L +G+RRA + +C N +S L
Sbjct: 61 LVSGDAVLFLRTADGELRLGVRRAAQA----------------KTC--SNYLAAYSQLL- 101
Query: 251 EEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRAS 310
N SG +++ V +S F + Y PRAS
Sbjct: 102 --------------------NVSG-------------IVDVVKAISSTNAFSICYNPRAS 128
Query: 311 TPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPW 370
+ F + + + GMRFKM ETED++ F G + V DP+ WP S W
Sbjct: 129 SSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAE-QRFTGLVVGVSDVDPVRWPGSKW 187
Query: 371 RLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLP---QQLDFPF-- 425
R L V WD+ D+ ++ RVSPW +E + PV S P+ K+ R+ + DFP
Sbjct: 188 RCLLVRWDDLDVSRH-NRVSPWEIEPSGSAPVSS-SLVMPSAKRTRVGFPITKADFPIPR 245
Query: 426 DG----------QFTMPLFSGNPLGPSSPLCCLSDNT--SAGIQ 457
DG +F L LG SSP ++ +AGI+
Sbjct: 246 DGIAVSDFGESSRFQKVLQGQEILGISSPFVGFDAHSPRTAGIR 289
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/417 (31%), Positives = 186/417 (44%), Gaps = 85/417 (20%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE-----------HSLGSVNFPSSSRIPPLIFC 59
+LW+ CAG + +P V+YFPQGH E H + PS R C
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR------C 78
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ D TDEVYA+I L+P + + ++ D+ F+K LT
Sbjct: 79 RVVAIDRKVDKNTDEVYAQISLMP--------DTTEVMTHNTTMDTRRPIVYFFSKILTA 130
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GG +P+ A FP LD + Q +VAKD++G+ W F+H++RGTP+RH+ T
Sbjct: 131 SDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFT 190
Query: 180 T--GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
+ GWS F K+L+ GD V LR ++G+L GIRRAK G PSS
Sbjct: 191 SGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQG---HIPSSV--------- 238
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
S N +G V+ +V A
Sbjct: 239 ----------------------------------ISANCMQHG-------VIASVVNAFK 257
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
K V Y + S+ +F + AM +++ G RF+M FE +D S + GTI V
Sbjct: 258 TKCMFNVVY-KPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE-KRYDGTIIGV 315
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
P W +S WR L+V WDE +VSPW +E + +P +S S +KK
Sbjct: 316 NDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHL--IPSSDISQSSLKKKK 369
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 133/217 (61%), Gaps = 16/217 (7%)
Query: 6 KSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCR 60
K+I+ +LWHACAG +V +PP+ S V YFPQGH+E S+N P+ +P + C
Sbjct: 18 KNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICM 77
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF-AKTLTQ 119
+ ++ AD ETDEVYA++ L P+ +E L + +G +S +PA F KTLT
Sbjct: 78 LHNVTLHADPETDEVYAQMTLQPV----NKYEKEALLASDIGL-KQSRQPAEFFCKTLTA 132
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE IFP L+ + V +++ +H + I+ G P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLNMNMN--VVILISLQIHKNV---HCIFSGQPKRHLLT 187
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV+ K+L AGDS++F+R + L +GIRRA +
Sbjct: 188 TGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANR 224
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRAS EF + + AM GMRF+M FETE+S + +MGTI+ +
Sbjct: 256 PFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESG-VRRYMGTITGISD 314
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
D + W NS WR LQV WDE + RVS W VE V
Sbjct: 315 MDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPV 352
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR +D++ Y+EL LA MFGIE R+D ++Y D I GD+P+
Sbjct: 976 VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDW--KLVYVDHENDILLVGDDPWD 1033
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 1034 EFVSCVQSIKIL 1045
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 176 bits (445), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 111/168 (66%), Gaps = 5/168 (2%)
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPIPAN-EIDFEDNNLSLNSVGSDSE----SEK 109
P +FCRV + AD+ DEVYA++ LVP E + D ++ ++ D E S
Sbjct: 28 PHVFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADTEEEDLEGAGKSTT 87
Query: 110 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIY 169
P F KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+HG WKFRHIY
Sbjct: 88 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGMGWKFRHIY 147
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG 217
RG PRRHLLTTGWS FVN+KKLV+GD+++FLR DG+L +G+RRA +
Sbjct: 148 RGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQA 195
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 119/217 (54%), Gaps = 15/217 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP + V+YFPQGH E S +P + CRV +++
Sbjct: 28 QLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQPIVDLPSKLQCRVITIQ 87
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
+ +DE YA+I L+P + N + + SF K LT SD +
Sbjct: 88 LKVERNSDETYAEITLMPYTTQVVIPTQNENQFRPLVN--------SFTKVLTASDTSAH 139
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVPR A P LD + P Q ++ D+HG W+F+H YRGTPRRHLLTTGW+ F
Sbjct: 140 GGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAF 199
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGN 222
+ KKLVAGD IVFLR + G+L VGIRRA G GN
Sbjct: 200 ITSKKLVAGDVIVFLRGETGELRVGIRRA--GYQQGN 234
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 172 bits (437), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 193/402 (48%), Gaps = 69/402 (17%)
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLTQSDANNGG 126
AD+ETDEVYA++ L P+ A E+ L + S +P + F KTLT SD + G
Sbjct: 3 ADAETDEVYAQMTLQPLSAQELKEAYLPAELGT-----PSRQPTNYFCKTLTASDTSTHG 57
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLLTTGWS FV
Sbjct: 58 GFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFV 117
Query: 187 NQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFS 246
+ K+LVAGD+++F+ + L +GIRRA + PSS +S++ G
Sbjct: 118 SAKRLVAGDAVLFIWNEKNQLLLGIRRASR---PQTVMPSSVLSSDSMHL-------GLL 167
Query: 247 CFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYY 306
++R F N R + + LA K + VY+
Sbjct: 168 AAAAHAAATISR-----------FTIFFNPRASPSEF-------VIPLA---KYVKAVYH 206
Query: 307 PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWP 366
R V MR L FETE+ ++ + +++ V P+ W
Sbjct: 207 TR------------VSVGMRFRML--------FETENQVFVATWAQSLALVTWI-PVRWQ 245
Query: 367 NSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFD 426
NS WR ++V WDE + +VS W +E ++ P ++ SPF P R L+ P P
Sbjct: 246 NSHWRSVKVGWDESTAGERQPKVSLWEIEPLTTFP-MYPSPF-PLR--LKRPWPTGLPSF 301
Query: 427 GQFTMPLFSGNPLGPSSPLCCL-SDNTSAGIQGARHAQFGIS 467
G + LG +SP L DN+ GIQ G+S
Sbjct: 302 G------IKDSDLGMNSPFMWLRGDNSDRGIQCLNFQGAGVS 337
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 169/391 (43%), Gaps = 71/391 (18%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + +P T++YFPQGH E S +P + C V ++
Sbjct: 27 QLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHFDLPSKLRCCVDDIQ 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
D TD+VYA+I L+P D D + ++ D++ SF+K LT SDAN
Sbjct: 87 LKIDQNTDDVYAEIYLMP------DTTDVITPITTM--DNQRPMVYSFSKILTSSDANTH 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GG S+ + A P LD + P+Q +VAKD+HG W F+H +RGTPRRHL T+GWS F
Sbjct: 139 GGLSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRHLFTSGWSLF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGF 245
K+L+ GD V +R +G G
Sbjct: 199 ATTKRLIV-----------GDAFVFLRGENGELGVG------------------------ 223
Query: 246 SCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK-PFEVV 304
R L S S +G V+ +V A K F VV
Sbjct: 224 -----------IRRARHQLGHKPSLVISTQCMKDG-------VIASVVNAFKSKCKFIVV 265
Query: 305 YYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPIS 364
Y P +S +F V AM ++ G RF+M FE +D S + GTI V P
Sbjct: 266 YKPSSS--QFVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSE-KRYSGTIIGVNDMSP-H 321
Query: 365 WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
W +S WR LQV WDE +VSPW +E
Sbjct: 322 WKDSEWRSLQVQWDELSPFPRPDKVSPWEIE 352
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 587 ISIEKSSSSEFFWNRSFQVTESGLDTGH--CKVFLESEDVGRTLDLSVLSSYEELYRRLA 644
+S +K W +V S ++ KV ++ +GR +DL+V Y +L ++L
Sbjct: 485 LSQDKKLDQTLTWTSPKEVQSSKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKLE 544
Query: 645 IMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
+F ++ RS +++ + G + GD+P+ +F AK++ I
Sbjct: 545 ELFDLKDELRSRNQWEIVFINNEGNVMPLGDDPWPEFCNMAKKIFI 590
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 113/209 (54%), Gaps = 38/209 (18%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
I+ +LWHACAG +V +PP S V YFPQGH+E
Sbjct: 33 INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQ--------------------------- 65
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
+ IKL N + L L+ + + F KTLT SD + GG
Sbjct: 66 --------FLDIKLT---VNGDQYGKEALQLSELALKQPRPQTEFFCKTLTASDTSTHGG 114
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
FSVPR AE IFP LD++ PP Q + A+D+H +W FRHIYRG P+RHLLTTGWS FV+
Sbjct: 115 FSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVS 174
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
K+L+AGDS++F+R + L +G RRA +
Sbjct: 175 GKRLLAGDSVIFVRDEKQQLLLGTRRANR 203
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF + Y PRAS EF V + + A+ + + GMRF+M FETE+ +MGTI+ +
Sbjct: 235 PFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELG-TRRYMGTITGIS 293
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR +QV WDE + RVS W +E V+
Sbjct: 294 DLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIEPVA 333
Score = 46.6 bits (109), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 70/166 (42%), Gaps = 35/166 (21%)
Query: 552 SDDVVSQVLGKSSSDGH-----SDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVT 606
+DD +S + S GH + S DG +Q IS S S + +F
Sbjct: 763 ADDFLSNGIDASKYQGHISTDIDGNYRISKDG-----QQEISSSMVSQSFGASDMAFNSI 817
Query: 607 ESGLDTG-------------------HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
+SG++ G KV+ VGR++D+S S Y+EL LA MF
Sbjct: 818 DSGMNDGGFVNRTSWPPAPPLKRMRTFTKVYKRGA-VGRSIDISQFSGYDELKHALARMF 876
Query: 648 GI-----ERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
+ ER + ++Y+D I GD+P+ +F+ K + IL
Sbjct: 877 SMEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVKCIRIL 922
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 124/219 (56%), Gaps = 21/219 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 24 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 84 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
RHLL +GWS FV+ K+LVAGD+ +FLR + V R
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR 237
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S EF V +++ ++ GMRFKM FE E+++ F GTI + +DP W +
Sbjct: 225 RTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGTIVGIGASDPSGWAD 283
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
S WR L+V WDEP + +RVSPW +E ++ H++P P R K
Sbjct: 284 SKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRFK 327
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH-VLYQDASGAIKRTG 671
KV + +GR++DL+ + Y+EL L MF + +S S V+Y D G I G
Sbjct: 647 KVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVG 706
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F ++ I
Sbjct: 707 DDPWNEFCDMVHKIFI 722
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 124/219 (56%), Gaps = 21/219 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 26 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 85
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 86 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 140
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 141 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 200
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
RHLL +GWS FV+ K+LVAGD+ +FLR + V R
Sbjct: 201 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR 239
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S EF V +++ ++ GMRFKM FE E+++ F GTI + +DP W +
Sbjct: 227 RTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGTIVGIGASDPSGWAD 285
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
S WR L+V WDEP + +RVSPW +E ++ H++P P R K
Sbjct: 286 SKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRFK 329
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH-VLYQDASGAIKRTG 671
KV + +GR++DL+ + Y+EL L MF + +S S V+Y D G I G
Sbjct: 653 KVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVG 712
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F ++ I
Sbjct: 713 DDPWNEFCDMVHKIFI 728
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 124/219 (56%), Gaps = 21/219 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 24 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 84 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
RHLL +GWS FV+ K+LVAGD+ +FLR + V R
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR 237
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S EF V +++ ++ GMRFKM FE E+++ F GTI + +DP W +
Sbjct: 225 RTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGTIVGIGASDPSGWAD 283
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
S WR L+V WDEP + +RVSPW +E ++ H++P P R K
Sbjct: 284 SKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRFK 327
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSH-VLYQDASGAIKRTG 671
KV + +GR++DL+ + Y+EL L MF + +S S V+Y D G I G
Sbjct: 651 KVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTDNEGDIMLVG 710
Query: 672 DEPFSDFMKSAKRLTI 687
D+P+++F ++ I
Sbjct: 711 DDPWNEFCDMVHKIFI 726
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 124/219 (56%), Gaps = 21/219 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 24 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 84 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
RHLL +GWS FV+ K+LVAGD+ +FLR + V R
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR 237
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S EF V +++ ++ GMRFKM FE E+++ F GTI + +DP W +
Sbjct: 225 RTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGTIVGIGASDPSGWAD 283
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
S WR L+V WDEP + +RVSPW +E ++ H++P P R K
Sbjct: 284 SKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRFK 327
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 169 bits (429), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/219 (41%), Positives = 124/219 (56%), Gaps = 21/219 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPL------IFCRVSSL 64
+LW ACAG + +PPL V+Y PQGH E S N + + PL I C++ ++
Sbjct: 24 ELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCKLMNI 83
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN----------SVGSDSESEKPASFA 114
+ + +TDEVYA++ L+P +D N S ++ + +E SF
Sbjct: 84 ELKVEPDTDEVYAQLTLLPDKK-----QDENTSTTVEEEEVVVPPALPATNEGPHIHSFC 138
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
KTLT SD + GGFSV R A+ P LD + PP Q +VAKD+HG W+FRHI+RG PR
Sbjct: 139 KTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRHIFRGQPR 198
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
RHLL +GWS FV+ K+LVAGD+ +FLR + V R
Sbjct: 199 RHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEFVVSRDR 237
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
R S EF V +++ ++ GMRFKM FE E+++ F GTI + +DP W +
Sbjct: 225 RTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAAEQR-FTGTIVGIGASDPSGWAD 283
Query: 368 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKK 414
S WR L+V WDEP + +RVSPW +E ++ H++P P R K
Sbjct: 284 SKWRSLKVRWDEPSSISRPERVSPWQIE--PSVSPCHVNPL-PVRFK 327
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 182/419 (43%), Gaps = 92/419 (21%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE-----HSLGSVNFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP + V+YFPQGH E SL S S L RV +++
Sbjct: 28 QLWKLCAGPLYDIPKVGEKVYYFPQGHIEILSLSLSLSLSLSLSLSLSLSLSLSRVIAIQ 87
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
+ +DE YA+I L+P + N+ +P+ SF K LT SD +
Sbjct: 88 LKVEKNSDETYAEITLMPYTTQVVIHNQND----------NHYRPSVNSFTKVLTASDTS 137
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSVPR A P L+ + P Q ++ D+ G W+F+H YRGTP RHL+TTGW+
Sbjct: 138 AHGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPPRHLITTGWN 197
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFG 243
F KKLVAGD IVFLR + G+L VGIRRA G GN PSS
Sbjct: 198 AFTTSKKLVAGDVIVFLRGECGELRVGIRRA--GHQQGNR-PSSL--------------- 239
Query: 244 GFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEV 303
S ++ G+G ++ AV + F V
Sbjct: 240 ----------------------------ISIDSMGHG------VIASAVHAFDNQCMFIV 265
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
V P + +F V A+ + G RF M FE +D S + GTI V+ P
Sbjct: 266 VCKPSIRSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSE-RRYSGTIIGVKDFSP- 323
Query: 364 SWPNSPWR-------------LLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFS 409
W S WR +L+V WDE +VSPW +E HL+P S
Sbjct: 324 HWIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEIE--------HLTPLS 374
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV +E VGR LDLSVL+ Y++L L +F + ++ + + D G GD
Sbjct: 536 KVQMEGVTVGRALDLSVLNGYDQLILELEKLFDLNGQLQTRNQWEISFIDNEGDKMFVGD 595
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F KR+ I
Sbjct: 596 DPWPEFCNMVKRIII 610
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 120/222 (54%), Gaps = 16/222 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQGH E S P + CRV +++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQ 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE YA+I L+P + N + + SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPLVN--------SFTKVLTASDTSVH 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGFSVP+ A P LD + P Q ++A D+HG W+FRHIYRGT +RHLLT GW+ F
Sbjct: 139 GGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS 227
KKLV GD IVF+R + G+L VGIRRA G GN PSS
Sbjct: 199 TTSKKLVEGDVIVFVRGETGELRVGIRRA--GHQQGN-IPSS 237
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 166 bits (420), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP-----SSSRIPPLIFCRVSSLK 65
++W AC+GS++ + V+YFP+ H E S N S +PP I CRV ++
Sbjct: 27 EIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPKILCRVLHIR 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
L + ET+EVYA+ L+P +D N + S ++ +P SF K LTQSD
Sbjct: 87 LLVEHETEEVYAETILIP-------NQDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIK 139
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
+ G SVP A FP LD + P Q ++AKD+ G W+F+H ++G PRRH LT GWS
Sbjct: 140 SNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWS 199
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
TFV KKL+AGD +VFLR + G L VGIRR
Sbjct: 200 TFVTSKKLLAGDLVVFLRDETGKLHVGIRR 229
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQGH E S +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE YA+I L+P + N + + SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPLVN--------SFTKVLTASDTSAH 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGF VP+ A P LD + P Q ++A D+HG W+F H YRGTP+RHLLTTGW+ F
Sbjct: 139 GGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAF 198
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIG 219
KKLVAGD IVF+R + G+L VGIRRA+ G
Sbjct: 199 TTSKKLVAGDVIVFVRGETGELRVGIRRARHQQG 232
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F VVY PR+S +F V A+ + G RF M E +D S F GTI V
Sbjct: 262 FTVVYKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCF-GTIIGVSDF 318
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL-SPFSPARKKLR 416
P W S WR L+V WDE K+VSPW +E + MP I++ F K+LR
Sbjct: 319 SP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINVPRSFLLKNKRLR 372
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 166 bits (419), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/303 (35%), Positives = 142/303 (46%), Gaps = 55/303 (18%)
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
SF KTLT SD + GGFSV R A+ P LD PP Q +VAKD+HG W FRHI+RG
Sbjct: 17 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHFRHIFRG 76
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
PRRHLLTTGWS FV+ K+L+A GD + +R
Sbjct: 77 QPRRHLLTTGWSVFVSSKRLIA-----------GDAFIFLR------------------G 107
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
NG G +R++ N + + + G +V A
Sbjct: 108 KNGELRVG-----VRRAMRQQNNVSSSVISSHSMHLG------------------VVATA 144
Query: 292 VALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
++ F V Y PR S F + AM ++ GMRFKM FE E++ F+
Sbjct: 145 SHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMRFKMRFEGEEAPE-QRFI 203
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPA 411
GTI +DP+ WP S WR L+V WDE ++ +RVSPW +EL++ LSP +
Sbjct: 204 GTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIELIATAAA--LSPLPVS 261
Query: 412 RKK 414
R K
Sbjct: 262 RNK 264
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 32/77 (41%), Gaps = 8/77 (10%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE------RSDMLSHVLYQDASGAI 667
H KV + GR +DL Y E L MF IE R L V+Y D G +
Sbjct: 640 HTKVQKQGSAFGRAVDLMKFEGYPEFIHELEQMFNIEGELEDPRKGWL--VVYTDNEGDM 697
Query: 668 KRTGDEPFSDFMKSAKR 684
GD P+ +F+ R
Sbjct: 698 MLVGDHPWQEFLHPINR 714
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP-----SSSRIPPLIFCRVSSLK 65
++W AC+GS++ + V+YFP+ H E S N S +PP I CRV ++
Sbjct: 27 EIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPKILCRVLHIR 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
L + ET+EVYA+ L+P +D N + S ++ +P SF K LTQSD
Sbjct: 87 LLVEHETEEVYAETILIPN-------QDQNEPTAADFSPLDNPRPQFQSFCKCLTQSDIK 139
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
+ G SVP A FP LD + P Q ++AKD+ G W+F+H ++G PRRH LT GWS
Sbjct: 140 SNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRHSLTNGWS 199
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
TFV KKL+AGD +VFLR + G L VGIRR
Sbjct: 200 TFVTSKKLLAGDLVVFLRDETGKLHVGIRR 229
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 165 bits (418), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 139/264 (52%), Gaps = 22/264 (8%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFL 67
+D +W ACA ++P + + V+YFP GHAE L P+S R P C V+ +
Sbjct: 18 VDRDVWLACAVPFSRVPTVGAEVYYFPDGHAEQHL-LAPLPASHRFP--CTCTVTDVSLG 74
Query: 68 ADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG 127
A+ TDEV+AKI L P PA E S+S + + F L D + G
Sbjct: 75 AEDRTDEVFAKISLRPGPAAASRPEPGP---GPGSSNSTRQGLSYFVNELLHRDTSTSGM 131
Query: 128 FSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVN 187
F +PRYC E IFP+LD A+PP Q +V +D G+ W+F HIY R+H LT GWS FV+
Sbjct: 132 FCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVKIRQHRLTAGWSEFVD 191
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIR----------RAKKGIGGGNEYPSS----GWNSNN 233
K LVAGD+IVF+R +GDL +G+R RA G + P+S W+S++
Sbjct: 192 AKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRASPPWAGPSRSPTSRDRPPWSSSS 251
Query: 234 GSC--VTGNPFGGFSCFLREEENK 255
+ + +P G E+ENK
Sbjct: 252 RTARWIARSPPAGNEARRLEDENK 275
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 175/374 (46%), Gaps = 80/374 (21%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGS-----VNFPSSSRIPPLIFCRVS 62
+ PQ+W C G+ VQIP L+S V+YFPQGH EH+ S ++ R P C +S
Sbjct: 17 VHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIHSLDLQRFRPFTICIIS 76
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
++ LAD TDEV+AK+ L P+ N + + + S D E SF + L ++
Sbjct: 77 AVDLLADPHTDEVFAKLLLTPVTNNSCVQDPHEVPNCSNDDDVCDEVIDSFTRILALTNV 136
Query: 123 NNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL-TTG 181
+ F +PR+CAE +FP L Q ++ DVHGE+WKF H+ G +R++ T+
Sbjct: 137 SKHA-FYIPRFCAENMFPPLGMEVS---QHLLVTDVHGEVWKFHHVCHGFAKRNVFYTSE 192
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNP 241
W++FV +K + GD V ++ + TG
Sbjct: 193 WASFVERK-----------KLDVGDAVVFMKNS-----------------------TGKL 218
Query: 242 FGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPF 301
F G +R ++ + + + V+EAV LA KPF
Sbjct: 219 FVG----IRRKDAAEQKKDELE----------------------KAVMEAVKLAEENKPF 252
Query: 302 EVVYYPRAST-PEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
E+VYYPR +F V + V +M++ W MR KM +T+ SSRI + GTI++V
Sbjct: 253 EIVYYPRGDDWCDFVVDGNIVDESMKIQWNPRMRVKM--KTDKSSRIP-YQGTITTV--- 306
Query: 361 DPISWPNSPWRLLQ 374
S ++ WR+LQ
Sbjct: 307 ---SRTSNLWRMLQ 317
>gi|302141887|emb|CBI19090.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/270 (40%), Positives = 138/270 (51%), Gaps = 19/270 (7%)
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSV 357
G PFEVVYYPR + +F VKA V+ A+ V W GMR KMA ETEDSS+ S F GT+SS
Sbjct: 46 GMPFEVVYYPRVGSSDFVVKAEVVEEALSVFWTGGMRVKMAMETEDSSKTSLFQGTVSSA 105
Query: 358 QVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRL 417
V D W S WR+LQVTWDEP++LQNV RVSPW VELV MP P K+ R+
Sbjct: 106 TVMDNGPWRGSLWRMLQVTWDEPEVLQNVMRVSPWQVELV--MPTPPFHTTPPPAKRFRI 163
Query: 418 PQQLDFPFDGQ----FTMPLFSGNPLGPSSPLCCLSDNT-SAGIQGARHAQFGISSSDFH 472
Q + P DG+ F M L PS L+ NT AG+QGAR F +SS
Sbjct: 164 AQSPELPSDGEGEIFFPMADTVMGILNPS----LLNHNTFPAGMQGARQDSFYVSSLSNL 219
Query: 473 VNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLS--------CLLTMGNSNQNLE 524
+ ++SL L ++ S+NLS T NQ+
Sbjct: 220 TSENTHQMCTINSLDDMATKLNTVSTELNIGSSLSDNLSPDSQGSVHFFGTKPVGNQDGN 279
Query: 525 KSENIKKHQFLLFGQPIRTEQQISHSCSDD 554
S + H F LFG+ I +Q + +CS D
Sbjct: 280 SSTKVGIHSFQLFGKVIHIKQPVEGNCSAD 309
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
Query: 49 SSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESE 108
S +P + C + ++ AD ET+EVYA++ L P+ ++ + L + +G +
Sbjct: 350 SYPNLPSKLICMLQNVTLNADPETEEVYAQMTLQPV----NKYDRDALLASDMGLKINRQ 405
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
F KTLT SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHI
Sbjct: 406 PNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHI 465
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+RG P+RHLLTTGWS FV+ K+L AGDS++F+R G L +GIRRA +
Sbjct: 466 FRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANR 513
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRA+ EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 193 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 251
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKLR 416
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P + R
Sbjct: 252 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 304
Query: 417 LPQQLDFPFDG 427
Q P DG
Sbjct: 305 FAGQPGMPDDG 315
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 11/131 (8%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRA+ EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 545 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 603
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPF---SPARKKLR 416
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P + R
Sbjct: 604 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 656
Query: 417 LPQQLDFPFDG 427
Q P DG
Sbjct: 657 FAGQPGMPDDG 667
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 5/89 (5%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPP 55
M+ ++I+ +LWHACAG ++ +PP S V YFPQGH+E S+ PS +P
Sbjct: 14 MEGERRNINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPS 73
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPI 84
+ C + ++ AD ET+EVYA++ L P+
Sbjct: 74 KLICMLQNVTLNADPETEEVYAQMTLQPV 102
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 146 ADPPVQTVVAKDVHGEIWKFRHI-----YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 200
ADP + V A+ + K R++ + G P+RHLLTTGWS FV+ K+L AGDS++F+
Sbjct: 86 ADPETEEVYAQMTLQPVNKVRYLSLYNSFLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFV 145
Query: 201 RAQDGDLCVGIRRAKK 216
R G L +GIRRA +
Sbjct: 146 RDGKGQLLLGIRRANR 161
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKRTGDEPFSDF 678
VGR++D++ Y+EL LA MFGIE D L+ ++Y D I GD+P+ +F
Sbjct: 1358 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVYVDHENDILLVGDDPWEEF 1417
Query: 679 MKSAKRLTIL 688
+ + + IL
Sbjct: 1418 VNCVQSIKIL 1427
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/183 (42%), Positives = 109/183 (59%), Gaps = 10/183 (5%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV------NFPSSSRIPPLIF 58
+KSI+P+LW ACAG +V +PP + V YFPQGH+E S+ P+ +P +
Sbjct: 23 KKSINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLL 82
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C + ++ AD ETDEVYA++ L P+PA ++ +L + + + + F KTLT
Sbjct: 83 CILHNVTLHADPETDEVYAQMTLQPVPA----YDKESLLRSDLALKTNKPQTDFFCKTLT 138
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL 178
SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H +W FRHIYRG + L
Sbjct: 139 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGRDEKQQL 198
Query: 179 TTG 181
G
Sbjct: 199 LLG 201
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 300 PFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQ 358
PF V Y PRAS EF + A KAA GMRF+M FETE+S +MGTI+ +
Sbjct: 239 PFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESG-TRRYMGTITGIS 297
Query: 359 VADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVS 398
DP+ W NS WR LQV WDE + RVS W +E V+
Sbjct: 298 DLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIEPVT 337
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 609 GLDTGH--CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE-----RSDMLSHVLYQ 661
G D H KV+ VGR++D++ S Y+EL + LA FGIE R + ++Y
Sbjct: 979 GSDLAHYFAKVYKRGA-VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYV 1037
Query: 662 DASGAIKRTGDEPFSDFMKSAKRLTIL 688
D + GD+P+ +F+ + + IL
Sbjct: 1038 DHENDVLLVGDDPWEEFVNCVRCIKIL 1064
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 162 bits (411), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Query: 7 SIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKF 66
+I ++W C G+ V+IP L+S V+YFPQGH +H PP I C +S++
Sbjct: 34 TIPTKIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHTIITLLHCYPPSISCIISAVDL 93
Query: 67 LADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGG 126
L D TDEV+AK+ L P+ + D + SF K LTQSD N+G
Sbjct: 94 LVDPHTDEVFAKLLLTPVMDGH--GHEQEAPPEVPAEDDDGYNVVSFVKILTQSDCNSGC 151
Query: 127 GFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFV 186
GF VP C + I P+L P Q + D+ G IW++ HIYRG +RHL + GW++FV
Sbjct: 152 GFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSRGWTSFV 211
Query: 187 NQKKLVAGDSIVFLR 201
N KKLVAGDS VF++
Sbjct: 212 NNKKLVAGDSFVFIK 226
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 119/221 (53%), Gaps = 24/221 (10%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN---------FPSSSRIP 54
V + + QLW CAG + +P + V+YFPQG+ E + S N F SSRI
Sbjct: 19 VNRYLYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASANDNLCQLKPIFDISSRI- 77
Query: 55 PLIFCRVSSLKFLADSETDEVYAKIKLVPI-PANEIDFEDNNLSLNSVGSDSESEKPASF 113
C V S+K ++ TDEVYAK+ L+P P EI F ++N + F
Sbjct: 78 ---HCNVISIKLKVETNTDEVYAKVSLLPCSPEVEITFPNDN----------NEQNIKYF 124
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SD G F + + A P LD + P Q +VAKD+H +WKF+H +RGTP
Sbjct: 125 TKVLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTP 184
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
+RHL T+GW FV K L GDS VFLR ++G+ VGIR+
Sbjct: 185 KRHLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKT 225
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F+V Y P++S +F V A+ + + RF M FE D + I + GTI V++
Sbjct: 260 FDVFYKPKSS--KFIVNCDKFLDAVNMKFNTSSRFTMKFEGHDFNEII-YSGTI--VKME 314
Query: 361 D-PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
D I W S WR LQV WDE + +VS W +E
Sbjct: 315 DFSIYWKGSEWRNLQVQWDEAATIPRPNKVSLWEIE 350
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 162 bits (410), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 120/212 (56%), Gaps = 23/212 (10%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS-------SSRIPPLIFCRVSS 63
+LW ACAG +V++P N VFYF QGH E L P+ ++P I C+
Sbjct: 15 ELWRACAGPLVELPQTNERVFYFLQGHLEQ-LQEPTDPALLAEQIKMFQVPNKILCK--- 70
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSD 121
A++ETDE+YA+I L P P +++D L E+ +P SF K LT SD
Sbjct: 71 ----AETETDEMYAQITLQPEP-DQVD-----LPQLPEPPLQETSRPVVHSFCKILTPSD 120
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
+ GGFSV R A P LD + P Q ++ KD+HG W+F+HIYRG PRRHLLTTG
Sbjct: 121 TSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRRHLLTTG 180
Query: 182 WSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
WSTFV KKL+AGD+ V+LR V + +
Sbjct: 181 WSTFVTSKKLIAGDAFVYLRLSQSQYIVRLNK 212
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 156/418 (37%), Gaps = 50/418 (11%)
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
Y R S ++ V+ + + ++ + GMRFKM+FE +D I F GT+ P W
Sbjct: 198 YLRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVP-IKKFSGTVVDKGDLSP-QW 255
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKKLRLPQQLDFP 424
S W+ L+V WDE L +RVS W +E ++ P I + P P+ K R P++
Sbjct: 256 QGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITM-PVQPSMKNKR-PRETAEG 313
Query: 425 FDGQFTMPL----FSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISSSDFHVNNKLQSG 480
D P SG P S+ + A + SS N+ +
Sbjct: 314 LDIHALEPAQEFWLSGRPEQHEKTSVSSSEPKHQVAWTSERAGYSAMSSSICQNSAVTGS 373
Query: 481 LFLS-------------SLQRFTPNSRD-----FDGILTSHTNS-SENLSCLLTMGNSN- 520
F S + F S D + G+ H + S LSC + +
Sbjct: 374 WFKGFNSSGSHPSLPEISQKLFQVTSNDARVPPWPGLSAYHADEPSSKLSCNTALCSYQT 433
Query: 521 -------QNLEKSENIKKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKVK 573
N + E + F LFG + I+H+ S S K+S +
Sbjct: 434 EEVAPRFSNAVEEEKKEPGMFRLFGVNL-----INHARS----SATADKTSVGAGETSAR 484
Query: 574 ASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVL 633
A+ S R++ + + R Q +S KV + DV R +DL L
Sbjct: 485 AAGSFEDSAQLSRVTKDHTHMVNGS-PREIQSHQSCSGRSRIKVQMHGNDVCRAVDLGNL 543
Query: 634 SSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
YE+L + MF I+ + V + + G P+ +F + +++ I
Sbjct: 544 DGYEQLMGEVGEMFEIKDLGSKEKEEWKVTFINDENETMEVGAVPWQEFCQMVRKIVI 601
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 105/168 (62%), Gaps = 13/168 (7%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGS----DSESE 108
+PP I C+V + LA+ ++DEVYA+I L+P + N +L S +
Sbjct: 20 LPPKILCQVVDTRLLAEQDSDEVYAQITLMP---------EANQALPSTFEPPLIECRKT 70
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
K SF K LT SD + GGFSV R A P LD T P Q +VAKD+HG W+F+HI
Sbjct: 71 KVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHI 130
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+RG PRRHLLTTGWSTFV K+LVAGDS VFLR ++G+L VG+RR +
Sbjct: 131 FRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLAR 178
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 111/287 (38%), Positives = 150/287 (52%), Gaps = 19/287 (6%)
Query: 281 GRVKPEMVLEAVALAASGKPFEVVYYPRAS-TPEFCVKASAVKAAMRVHWLCGMRFKMAF 339
GR+ E V EAV +AA G PF+VVYYPRA +F V+A AV+AA+ V W GMR KMA
Sbjct: 5 GRLSQEAVAEAVEMAAKGLPFDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAM 64
Query: 340 ETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 399
ETEDSSR++WF GT+S + D +W SPWR+LQ+TWDEP++LQN KRVSPW VE V+
Sbjct: 65 ETEDSSRMTWFQGTVSGTGLPDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVAT 124
Query: 400 MPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPL--FSGNPLGPSSPLCCLSDNTSAGIQ 457
P L P KKLR P F DG+ P+ + + +G ++ AG+Q
Sbjct: 125 TP--QLQAAFPPMKKLRYPNDSRFLTDGELFFPMSDLTNSTMGHTNASMLNYSTFPAGMQ 182
Query: 458 GARHAQFG-ISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLS----- 511
GAR F S+F N Q + P + + + SENLS
Sbjct: 183 GARQDPFSTFGLSNFISENAPQVFSDRAFGNNLVPKMKRMPSEMNIGSLQSENLSPESQS 242
Query: 512 -----CLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQISHSCSD 553
+ +GN N +K + + LFG+ I +Q + + D
Sbjct: 243 SAYSFGIGFVGNRGFNPKK---VGINSIQLFGKIIHMDQPVENGFDD 286
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 115/209 (55%), Gaps = 15/209 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L ++YFPQG+ E S +P + CRV +++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQ 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE YA+I L+P + N + + SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPLVN--------SFTKVLTASDTS-- 136
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGF VP+ A P LD + P Q ++A D+HG W+F H YRGTP+RHLLTTGW+ F
Sbjct: 137 GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAF 196
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
KKLVAGD IVF+R + G+L VGIRRA
Sbjct: 197 TTSKKLVAGDVIVFVRGETGELRVGIRRA 225
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 115/209 (55%), Gaps = 15/209 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L ++YFPQG+ E S +P + CRV +++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQ 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE YA+I L+P + N + + SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQVVIPTQNENQFRPLVN--------SFTKVLTASDTS-- 136
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGF VP+ A P LD + P Q ++A D+HG W+F H YRGTP+RHLLTTGW+ F
Sbjct: 137 GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAF 196
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
KKLVAGD IVF+R + G+L VGIRRA
Sbjct: 197 TTSKKLVAGDVIVFVRGETGELRVGIRRA 225
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 159 bits (401), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 117/210 (55%), Gaps = 14/210 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFP-----SSSRIPPLIFCRVSSLK 65
++W AC+GS++ +P L V YFP+ H + S N S +P I CRV ++
Sbjct: 23 EIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGLQLSHLPRKILCRVLHIR 82
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA--SFAKTLTQSDAN 123
L + +T+EVYA+ L+P + E N S E +P SF K LT SD
Sbjct: 83 LLVEHDTEEVYAETILLP------NQEQNEPSTPEF-CPLEPPRPQYQSFCKALTTSDIK 135
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
+ G SV R A FP LD + P Q ++ D+ G W+F+H+++G PRRHLL GWS
Sbjct: 136 SNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLLKHGWS 195
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
TFV KKL+AGD +VFLR + G L VGIRR
Sbjct: 196 TFVTSKKLLAGDLVVFLRDETGKLHVGIRR 225
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 119/240 (49%), Gaps = 39/240 (16%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--------------------FPSS 50
QLW CAG + IP L V+YFPQGH E +S
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSLLSLSVETS 86
Query: 51 SR-----------IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN 99
+R +P + CRV ++ ++ +DE YA+I L+P + N
Sbjct: 87 TREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMPDTTQVVIPTQNENQFR 146
Query: 100 SVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVH 159
+ + SF K LT SD + GGF VP+ A P LD + P Q ++A D+H
Sbjct: 147 PLVN--------SFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLH 198
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIG 219
G W+F H YRGTP+RHLLTTGW+ F KKLVAGD IVF+R + G+L VGIRRA+ G
Sbjct: 199 GNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQG 258
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F VVY PR+S +F V A+ + G RF M E +D S F GTI V
Sbjct: 288 FTVVYKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERRCF-GTIIGVSDF 344
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHL-SPFSPARKKLR 416
P W S WR L+V WDE K+VSPW +E + MP I++ F K+LR
Sbjct: 345 SP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINVPRSFLLKNKRLR 398
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 173/389 (44%), Gaps = 93/389 (23%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDN-NLSLNSVGSD-----SE 106
+P I C+V +++ A+ +TDEVYA++ L+P + + N N+S + V + +
Sbjct: 46 LPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAA 105
Query: 107 SEKPA--SFAKTLTQSDANNGGGFSVPRYCAETIFPRL-------------------DYT 145
+E+P SF KTLT SD + GGFSV R A+ P L D +
Sbjct: 106 TERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLLDQDMS 165
Query: 146 ADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
PP Q +VAKD+HG W+FRHI+RG PRRHLL +GWS VF+ A+
Sbjct: 166 QHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWS--------------VFVSAK-- 209
Query: 206 DLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLN 265
V G+ F FLR E NG + +
Sbjct: 210 -----------------------------RLVAGDAF----IFLRGE------NGELRVG 230
Query: 266 SYGSFNSSGNTRGNGGRVKPEMVLEAVALA----ASGKPFEVVYYPRASTPEFCVKASAV 321
+ N + M L +A A +G F V Y PR S EF V
Sbjct: 231 VRRAMRQQANIPSSVISSH-SMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLY 289
Query: 322 KAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPD 381
K +++ + GMRFKM FE E+++ F GTI V +DP W +S WR L+V WDE
Sbjct: 290 KESLKRNHSIGMRFKMTFEGEEAAE-QRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAA 348
Query: 382 LLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
+ RVSPW +E P SP +P
Sbjct: 349 SVPRPDRVSPWQIE-----PANSPSPVNP 372
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 123/389 (31%), Positives = 172/389 (44%), Gaps = 100/389 (25%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVP------IPANEIDFEDNNLSLNSVGSDSE 106
+P I C+V +++ A+ +TDEVYA++ L+P + ++++ E+ V +
Sbjct: 67 LPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYGNVSKDKVEEEE-------VVPPAA 119
Query: 107 SEKPA--SFAKTLTQSDANNGGGFSVPRYCAETIFPRL-------------------DYT 145
+E+P SF KTLT SD + GGFSV R A+ P L D +
Sbjct: 120 TERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLLDQDMS 179
Query: 146 ADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
PP Q +VAKD+HG W+FRHI+RG PRRHLL +GWS VF+ A+
Sbjct: 180 QHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWS--------------VFVSAK-- 223
Query: 206 DLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLN 265
V G+ F FLR E NG + +
Sbjct: 224 -----------------------------RLVAGDAF----IFLRGE------NGELRVG 244
Query: 266 SYGSFNSSGNTRGNGGRVKPEMVLEAVALA----ASGKPFEVVYYPRASTPEFCVKASAV 321
+ N + M L +A A +G F V Y PR S EF V
Sbjct: 245 VRRAMRQQANIPSSVISSH-SMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLY 303
Query: 322 KAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPD 381
K +++ + GMRFKM FE E+++ F GTI V +DP W +S WR L+V WDE
Sbjct: 304 KESLKRNHSIGMRFKMTFEGEEAAEQR-FTGTIVGVGDSDPSGWADSKWRSLKVRWDEAA 362
Query: 382 LLQNVKRVSPWLVELVSNMPVIHLSPFSP 410
+ RVSPW +E P SP +P
Sbjct: 363 SVPRPDRVSPWQIE-----PANSPSPVNP 386
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 8/164 (4%)
Query: 52 RIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA 111
++P I C+V +++ A++ETDEV+A+I L P P E NL E +P
Sbjct: 28 QVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQE------NLPTLPDPPLPEQPRPV 81
Query: 112 --SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIY 169
SF K LT SD + GGFSV R A P LD + P Q ++ KD+HG W+F+HIY
Sbjct: 82 VHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIY 141
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
RG PRRHLLTTGWSTFV KKL++GD+ V+LR++ G+ VG+RR
Sbjct: 142 RGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRR 185
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 120/424 (28%), Positives = 178/424 (41%), Gaps = 88/424 (20%)
Query: 3 EVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVS 62
E ++ +LW CAG + P + + A IP I C V
Sbjct: 18 ETNNYLNDKLWKLCAGPLFDTPKIGEKLV------ASMDDELCQLKPIFDIPSKICCNVF 71
Query: 63 SLKFLADSETDEVYAKIKL--------VPIPANEIDFEDNNLSLNSVGSDSESEKPASFA 114
S+ + T+E+YA++ L +PIP NE + ++ N F
Sbjct: 72 SINLKVEPSTNEIYAEVSLLPDTSDVEIPIPKNENNIQNINY----------------FT 115
Query: 115 KTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR 174
K L+ SD + GGF + + A P LD + P Q ++AKD+HG W F+H RGTP+
Sbjct: 116 KVLSASDTSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPK 175
Query: 175 RHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNG 234
RHL T+GW+ F KKLVAGDS VFLR ++G+ VGI +A
Sbjct: 176 RHLFTSGWNEFAKGKKLVAGDSFVFLRGENGESRVGISKAA------------------- 216
Query: 235 SCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVAL 294
RN +L S S + S V+
Sbjct: 217 --------------------HQQRNIPTSLISKESMHHS--------------VVATALN 242
Query: 295 AASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGT 353
A K VV+Y PR+S +F V + + G +F M FE +D + I + GT
Sbjct: 243 AIENKCMFVVFYKPRSS--QFIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIR-YNGT 299
Query: 354 ISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+ V+ W +S WR L+V WDE + +VSPW +EL+++ I S ++
Sbjct: 300 VVGVRDFS-THWKDSEWRSLEVQWDEAATIPRPDKVSPWEIELLTHSSNIFKSDALKHKR 358
Query: 414 KLRL 417
+L +
Sbjct: 359 QLEV 362
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 105/167 (62%), Gaps = 7/167 (4%)
Query: 53 IPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES---EK 109
+P I C V +++ A+ + DEVYA++ L+P E E+N S S + +
Sbjct: 6 LPWKILCEVMNVELKAEPDNDEVYAQLTLLP----ESKPEENGSSEEMPASPPAALARPR 61
Query: 110 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIY 169
SF KTLT SD + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+
Sbjct: 62 VHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIF 121
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
RG PRRHLL +GWS FV+ K+LVAGD+ +FLR G+L VG+RRA +
Sbjct: 122 RGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMR 168
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y PR S EF V +++ ++ GMRFKM FE E++ F GTI
Sbjct: 197 TGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAPEQR-FTGTIVG 255
Query: 357 VQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPVIHLSPFSPARKK 414
D W S WR L+V WDE + +RVSPW +E VS P+ L P R +
Sbjct: 256 NVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPLPVHRPKRPR 314
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 123/235 (52%), Gaps = 30/235 (12%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE-----------HSLGSVNFPSSSRIPPLIFC 59
+LW+ CAG + +P V+YFPQGH E H + PS R C
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR------C 78
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ D TDEVYA+I L+P + + ++ D+ F+K LT
Sbjct: 79 RVVAIDRKVDKNTDEVYAQISLMP--------DTTEVMTHNTTMDTRRPIVYFFSKILTA 130
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GG +P+ A FP LD + Q +VAKD++G+ W F+H++RGTP+RH+ T
Sbjct: 131 SDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFT 190
Query: 180 T--GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
+ GWS F K+L+ GD V LR ++G+L GIRRAK G PSS ++N
Sbjct: 191 SGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQG---HIPSSVISAN 242
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 575 SSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLS 634
+SD ++ I+ E ++S F G+D KV ++ + R +DL+ +
Sbjct: 408 NSDQMIQPRKEDITTEATTSCLLF----------GVDL--TKVHMQGVAISRAVDLTAMH 455
Query: 635 SYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
Y +L ++L +F ++ R+ +++ + GA GD+P+ +F AKR+ I
Sbjct: 456 GYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFI 511
Score = 39.3 bits (90), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 26/151 (17%)
Query: 336 KMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+M FE +D S + GTI V P W +S WR L+V WDE +VSPW +E
Sbjct: 269 RMQFEGKDFSE-KRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
Query: 396 LVSNMPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAG 455
+ +P +S S +KK L QL N +G + LS+ +
Sbjct: 327 HL--IPSSDISQSSLKKKKHWL--QL---------------NEIGAT-----LSNLWTCQ 362
Query: 456 IQGARHAQFGISSSDFHVNNKLQSGLFLSSL 486
G R IS +F N ++ FLS L
Sbjct: 363 EIGQRSMNSPISVPEFSYPNAIEDSKFLSGL 393
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 123/235 (52%), Gaps = 30/235 (12%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE-----------HSLGSVNFPSSSRIPPLIFC 59
+LW+ CAG + +P V+YFPQGH E H + PS R C
Sbjct: 25 KLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLR------C 78
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQ 119
RV ++ D TDEVYA+I L+P + + ++ D+ F+K LT
Sbjct: 79 RVVAIDRKVDKNTDEVYAQISLMP--------DTTEVMTHNTTMDTRRPIVYFFSKILTA 130
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GG +P+ A FP LD + Q +VAKD++G+ W F+H++RGTP+RH+ T
Sbjct: 131 SDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFT 190
Query: 180 T--GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
+ GWS F K+L+ GD V LR ++G+L GIRRAK G PSS ++N
Sbjct: 191 SGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQG---HIPSSVISAN 242
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 336 KMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+M FE +D S + GTI V P W +S WR L+V WDE +VSPW +E
Sbjct: 269 RMQFEGKDFSE-KRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 150 bits (378), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/224 (37%), Positives = 123/224 (54%), Gaps = 20/224 (8%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP +
Sbjct: 25 KKCLNSELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLI 84
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLT 118
C++ + AD ETDEVYA++ L P+ E N+ L + + F KTLT
Sbjct: 85 CQLHDVTMHADVETDEVYAQMTLQPLNPQ----EQNDAYLPAEMGIMSKQPTNYFCKTLT 140
Query: 119 QSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT------ 172
SD + GGFSVPR AE +FP L + ++ + + I+ G
Sbjct: 141 ASDTSTHGGFSVPRRAAERVFPPLVISHS----SLQHRSLLHGIFMMSSGNSGISSEASQ 196
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
P+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRRA +
Sbjct: 197 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 240
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 273 FTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 331
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 332 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 374
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAI 667
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 725 VKVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDV 781
Query: 668 KRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 782 LLLGDDPWESFVNSVWYIKILSPEDVHKMGK 812
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 85/113 (75%), Gaps = 2/113 (1%)
Query: 104 DSESEKPAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
D + EK S F KTLT SD + GGFSVPR AE FP LDY P Q ++AKD+HG
Sbjct: 20 DGDGEKLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGM 79
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
W+FRHIYRG PRRHLLTTGWS+F+N+KKLV+GD+++FLR DG+L +G+RRA
Sbjct: 80 KWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGSDGELRLGVRRA 132
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 287 MVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
++L AVA + + F + + PR EF V + + G RFK+ + ED++
Sbjct: 152 LMLSAVASSLDNRSIFHICFNPRIGASEFIVPYCKFLKGLNYPFSIGTRFKVGCKNEDAN 211
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH 404
S+ G IS + DPI WP S W+ L V WD + RVSPW +E V S++ V H
Sbjct: 212 ERSF--GLISGISEVDPIRWPGSKWKSLLVKWDGDTKYSHQNRVSPWDIERVGSSVSVTH 269
Query: 405 -LSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGN 437
LS R KL PQ G P+ GN
Sbjct: 270 CLSSCVSKRMKLCFPQ-------GNLDAPILDGN 296
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/114 (59%), Positives = 85/114 (74%), Gaps = 3/114 (2%)
Query: 104 DSESEKPAS---FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHG 160
D + EK + F KTLT SD + GGFSVPR AE FP LDY P Q ++AKD+HG
Sbjct: 23 DGDGEKKHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHG 82
Query: 161 EIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
W+FRHIYRG PRRHLLTTGWS+F+N+KKLV+GD+++FLR DG+L +G+RRA
Sbjct: 83 MKWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRA 136
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 72/146 (49%), Gaps = 7/146 (4%)
Query: 287 MVLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSS 345
++L AVA + + F + + PR EF V ++ H+ G RFK+ E ED++
Sbjct: 156 LMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDAN 215
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH 404
S+ G I + DPI WP S W+ L + WD + RVSPW +E V S++ V H
Sbjct: 216 ERSF--GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTH 273
Query: 405 -LSPFSPARKKLRL-PQQLDFP-FDG 427
LS R KL P LD P DG
Sbjct: 274 RLSSSVSKRTKLCFPPSDLDTPILDG 299
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 189/738 (25%), Positives = 280/738 (37%), Gaps = 176/738 (23%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSL--------GSVNFPSSSRI 53
K V+ S+ +LW ACAGS V +P TV YFPQGH E G + P +
Sbjct: 15 KGVKDSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVYD-L 73
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS--ESEKPA 111
P I C++ ++ A++ +DEVYA++ LVP + +NL L +D
Sbjct: 74 PSKILCKIMHIELKAEAFSDEVYAQVTLVPA------LKQDNLRLEVEENDQIPSITTTY 127
Query: 112 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
+F+K LT SD + GGFSVP+ A+ FP LD T P Q +VAKD++G
Sbjct: 128 TFSKILTPSDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNG----------- 176
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNS 231
A+ G++ VGIRRA + + S
Sbjct: 177 ------------------------------AESGEIRVGIRRATEHLSN---------VS 197
Query: 232 NNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEA 291
+ S ++G+ +M L G S+ + +G +
Sbjct: 198 QSSSLISGH--------------------SMQL---GILASASHAVSSG-------TMFI 227
Query: 292 VALAASGKPFEVVY----YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI 347
V PFE + Y +++ P++ + GMR +M E E+S R
Sbjct: 228 VYYHPWTNPFEFIVPLRTYLKSTVPDYPI---------------GMRVQMQHEVEESLR- 271
Query: 348 SWFMGTISSVQVADPISWPNSPWRLLQVTWDEP-DLLQNVKRVSPWLVELVSNMPVIHLS 406
GTI + D I WP S WR L+V WD D N +RV PW +E + +
Sbjct: 272 -RHAGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIEPLESAKEKKQV 330
Query: 407 PFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCC----LSDNTSAGIQGARHA 462
P P KK Q P F M N GPSS L +GI A+
Sbjct: 331 PALPTTKKALALNQRSLPGISSFGM-HDGQNSAGPSSQTRREDRDLQGQDYSGIHSAQPL 389
Query: 463 QFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSENLSCL---LTMGNS 519
Q + H + G S + PN F H + S ++S L++ +S
Sbjct: 390 QRAPPTDVIHPSKVPIRG---SRFGKENPNQLPFPMQGPLHKSLSRSMSLTHEDLSITSS 446
Query: 520 NQNLEKSENI-------KKHQFLLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGHSDKV 572
N + SE++ + + FGQP SCS ++ G S D S+
Sbjct: 447 NLSSIGSESLGWPSTESRNENDVPFGQP--------GSCS---TFKLFGVSLIDRSSELP 495
Query: 573 KASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC---------KVFLESED 623
S T S N +V G C KV
Sbjct: 496 SLQSAAFNKT------------SSLLSNPPMRVA-PGKTCKKCHRVNNRSCTKVLKLGTA 542
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIKRTGDEPFSDF 678
+GR +DL+ Y EL L MF R +++ HV D G + + GD P+ DF
Sbjct: 543 LGRAVDLARFHGYTELIAELDSMFEF-RGSLINESSGWHVTCMDDDGDMMQLGDYPWQDF 601
Query: 679 MKSAKRLTILMGSGSDSV 696
+++ I G++++
Sbjct: 602 QGVVQKMIICPKEGTNNI 619
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 134/284 (47%), Gaps = 58/284 (20%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD + GGFSV R A P LD + P Q + AKD+HG WKF+HI+RG
Sbjct: 22 FCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQ 81
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSN 232
PRRHLLTTGWSTFV K+LVA GD V +R +
Sbjct: 82 PRRHLLTTGWSTFVTSKRLVA-----------GDAFVFLR------------------GD 112
Query: 233 NGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAV 292
NG LR + AR ++ +S S +S VL
Sbjct: 113 NGE-------------LRVGVRRQARQQSLMPSSVISSHSMHLG-----------VLATA 148
Query: 293 ALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFM 351
+ A + + VVYY PR S +F + + ++ + GMRFKM FE E+S F
Sbjct: 149 SHAVRTQTYFVVYYKPRTS--QFIISLNKYLETVKNGYEVGMRFKMRFEGEESPERR-FT 205
Query: 352 GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
GTI V P W +S WR L++ WDEP +Q +RVSPW +E
Sbjct: 206 GTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIE 248
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGD 672
KV ++ VGR +DL+ L YE+L L +F I+ R +++ D + GD
Sbjct: 484 KVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGINKWSIVFTDDENDMMLVGD 543
Query: 673 EPFSDFMKSAKRLTI 687
+P+ +F K KR+ I
Sbjct: 544 DPWPEFCKMVKRIFI 558
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 81/112 (72%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEI 162
++ + P F KTLT SD + GGFSVPR AE FP LDY P Q ++A D+HG
Sbjct: 24 AEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQ 83
Query: 163 WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
WKFRHIYRG PRRHLLT GWS+FVN+KKLV+GD+++FLR DG L +G+RRA
Sbjct: 84 WKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRA 135
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
+L +VA + K F + + PR+ EF V + ++ + GMRF++ +E+ED++
Sbjct: 156 ILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANE 215
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIHL 405
S G IS + DPI WP S W+ L V WD+ + RVSPW +E V ++ V H
Sbjct: 216 RS--AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHS 273
Query: 406 SPFSPARKKLRLPQ-QLDFPF 425
R KL PQ LD PF
Sbjct: 274 LSSGSKRTKLHFPQGSLDTPF 294
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/112 (58%), Positives = 81/112 (72%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEI 162
++ + P F KTLT SD + GGFSVPR AE FP LDY P Q ++A D+HG
Sbjct: 23 AEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQ 82
Query: 163 WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
WKFRHIYRG PRRHLLT GWS+FVN+KKLV+GD+++FLR DG L +G+RRA
Sbjct: 83 WKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRA 134
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
+L +VA + K F + + PR+ EF V + ++ + GMRF++ +E+ED++
Sbjct: 155 ILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANE 214
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIHL 405
S G IS + DPI WP S W+ L V WD+ + RVSPW +E V ++ V H
Sbjct: 215 RS--AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHS 272
Query: 406 SPFSPARKKLRLPQ-QLDFPF 425
R KL PQ LD PF
Sbjct: 273 LSSGSKRTKLHFPQGSLDTPF 293
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 145 bits (367), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 111/193 (57%), Gaps = 16/193 (8%)
Query: 30 VFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEI 89
+FY G H S P ++ PP + RV +++ + +DE YA+I L+P
Sbjct: 11 IFYALDG--THHTISHTLPCKAKQPPPLQRRVIAIQLKVERNSDETYAEITLMP------ 62
Query: 90 DFEDNNLSLNSVGSDSESE-KPA--SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA 146
N + + + +E++ +P SF K LT SD + GGFSVPR A P LD +
Sbjct: 63 -----NTTQVVIPTQNENQFRPLVNSFTKVLTASDTSAHGGFSVPRKLAIECLPPLDMSQ 117
Query: 147 DPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
P Q ++ D+HG W+F+H YRGTPRRHLLTTGW+ F+ KKLVAGD IVFLR + G+
Sbjct: 118 PLPAQELLTIDLHGNQWRFKHSYRGTPRRHLLTTGWNAFITSKKLVAGDVIVFLRGETGE 177
Query: 207 LCVGIRRAKKGIG 219
L V IRRA+ G
Sbjct: 178 LRVSIRRARYQQG 190
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 301 FEVVYYPR--------ASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMG 352
F VVY PR + +F V A+ + G RF M FE E+ S +F G
Sbjct: 220 FIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTMRFEEENFSERRYF-G 278
Query: 353 TISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPAR 412
TI V P W S WR L+V WDE +VSPW E+ + P ++ P S +
Sbjct: 279 TIIGVSDFSP-HWKCSEWRSLKVQWDEFASFPRPDKVSPW--EIKHSTPSSNVLPSSMLK 335
Query: 413 KK 414
K
Sbjct: 336 NK 337
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 145 bits (366), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 175/425 (41%), Gaps = 85/425 (20%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--FPSSSRIPPLIFCRVS 62
+ ++D +W ACA +IP + V YFP GH E L + P+ R C V+
Sbjct: 56 DNTVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQHRF----HCTVT 111
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
+ D +TDEV+AKI L P P ++ + S +K F K L+Q+D
Sbjct: 112 DVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDV 171
Query: 123 NNGGGFSVPRYCAETI-FPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP-RRHLLTT 180
F +P + P +D T Q VV +D G+ W+F Y P ++H LTT
Sbjct: 172 Y--ARFRIPLDNEHVLPIPMVD-TDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTT 228
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GW F K+L AGD IVF+R +GDL VG+RR
Sbjct: 229 GWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRR--------------------------- 261
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+++ Y F+ G + V+EAV LAA+G+P
Sbjct: 262 ---------------------LDVPRYPLFDFQGPDPDQPA----QDVMEAVRLAAAGRP 296
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKM-AFETEDSSRISWFMGTISSVQV 359
F V Y+PR + EF V S V A+ W G +M E E+ W +G + +++
Sbjct: 297 FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEVMEDENRQYTMWVVGRVEAIR- 355
Query: 360 ADPISWPNSPWRLLQVTW---DEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ WR+L++ W P L ++ V+ W V P+ P + R
Sbjct: 356 -------QNIWRMLEIIWGVPSHPPPLATMRSVNAWQVS----------RPWPPEGHRRR 398
Query: 417 LPQQL 421
P Q
Sbjct: 399 EPHQF 403
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 145 bits (366), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 140/311 (45%), Gaps = 75/311 (24%)
Query: 106 ESEKPA--SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIW 163
E KP SF K LT SD + GGFSV R A P LD T P Q +VA+D+HG W
Sbjct: 28 EPAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEW 87
Query: 164 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNE 223
+F+HI+RG PRRHLLTTGWSTFV K+L
Sbjct: 88 RFKHIFRGQPRRHLLTTGWSTFVTSKRL-------------------------------- 115
Query: 224 YPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRV 283
V G+ F FLR E + R G L S + R+
Sbjct: 116 -------------VAGDAF----VFLRGETGDL-RVGVRRLAKQQSTMPASVISSQSMRL 157
Query: 284 KPEMVLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETE 342
VL + A + VV+Y PR S +F + + AM+ + GMR++M FE E
Sbjct: 158 G---VLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGE 212
Query: 343 DS-SRISWFMGTISSVQVADPIS-WPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNM 400
+S RI F GTI + D S WP S WR LQ+ WDEP +Q +VSPW +E
Sbjct: 213 ESPERI--FTGTI--IGSGDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIE----- 263
Query: 401 PVIHLSPFSPA 411
PFSP+
Sbjct: 264 ------PFSPS 268
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS-----HVLYQDASGAIK 668
KV ++ VGR +DL++L SY+EL + L MF IE LS +++ D G
Sbjct: 405 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGE--LSPKDKWAIVFTDDEGDRM 462
Query: 669 RTGDEPFSDFMKSAKRLTI 687
GD+P+++F K AK+L I
Sbjct: 463 LVGDDPWNEFCKMAKKLFI 481
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 145 bits (365), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 115/225 (51%), Gaps = 35/225 (15%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSS 63
V ++ +LWHAC +V IP V+YFPQGH E S++ ++P
Sbjct: 32 VNIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMP--------- 82
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
F S+ I ++F N + F KTLT SD +
Sbjct: 83 -SFNLPSK------------ILCKXVNFIHNCIV-------------HPFCKTLTASDTS 116
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSV R + P LD + +PP Q +VAKD+HG FRHI++G PR HLLTTGWS
Sbjct: 117 THGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPFRHIFQGQPRCHLLTTGWS 176
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSG 228
FV+ K+L GD+++FLR ++G+LCVG+RR + + +P+
Sbjct: 177 VFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVPLFPNKA 221
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 175/425 (41%), Gaps = 85/425 (20%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--FPSSSRIPPLIFCRVS 62
+ ++D +W ACA +IP + V YFP GH E L + P+ R C V+
Sbjct: 56 DNTVDRDVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQPLPAQHRF----HCTVT 111
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA 122
+ D +TDEV+AKI L P P ++ + S +K F K L+Q+D
Sbjct: 112 DVSLGVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKLRYFTKELSQTDV 171
Query: 123 NNGGGFSVPRYCAETI-FPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP-RRHLLTT 180
F +P + P +D T Q VV +D G+ W+F Y P ++H LTT
Sbjct: 172 Y--ARFRIPLDNEHVLPIPMVD-TDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLTT 228
Query: 181 GWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGN 240
GW F K+L AGD IVF+R +GDL VG+RR
Sbjct: 229 GWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRR--------------------------- 261
Query: 241 PFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKP 300
+++ Y F+ G + V+EAV LAA+G+P
Sbjct: 262 ---------------------LDVPRYPLFDFQGPDPDQPA----QDVMEAVRLAAAGRP 296
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKM-AFETEDSSRISWFMGTISSVQV 359
F V Y+PR + EF V S V A+ W G +M E E+ W +G + +++
Sbjct: 297 FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEVMEDENRQYTMWVVGRVEAIR- 355
Query: 360 ADPISWPNSPWRLLQVTW---DEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLR 416
+ WR+L++ W P L ++ V+ W V P+ P + R
Sbjct: 356 -------QNIWRMLEIIWGVPSHPPPLATMRSVNAWQVS----------RPWPPEGHRRR 398
Query: 417 LPQQL 421
P Q
Sbjct: 399 EPHQF 403
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 109/174 (62%), Gaps = 12/174 (6%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YF QGH+E S N P+ +PP +
Sbjct: 17 KRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDARIPNYPSLPPQLI 76
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ ++ AD ETDEVYA++ L P+ E +D L + +G+ S++P + F KTL
Sbjct: 77 CQLHNVTMHADVETDEVYAQLTLQPLSPQEQ--KDAYLPAD-LGT--PSKQPTNYFCKTL 131
Query: 118 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
T SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRG 185
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 162/406 (39%), Gaps = 92/406 (22%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHS--LGSVNFPSSSRIPPLIFCRVS 62
+ ++D +W ACA +IP + V+YFP GH E L + P+ R C V+
Sbjct: 15 DNTVDRDVWLACAAPFSRIPTVGDEVYYFPDGHIEQHQHLSAAPLPAQDRF----HCTVT 70
Query: 63 SLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS------FAKT 116
+ D +TDEV+AKI L S+S + P F K
Sbjct: 71 DVSLGVDDKTDEVFAKISL----RPRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYFTKD 126
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPP------VQTVVAKDVHGEIWKFRHIYR 170
L+Q+D F +P E + P D Q VV +D G+ W+F YR
Sbjct: 127 LSQTDVY--AKFRIP-LENEHVLPIPKVETDGADQQRVQRQDVVMRDTRGKSWRFSETYR 183
Query: 171 GTP-RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGW 229
P + H L TGW F K+L AGD IVF+R +GDL VG+RR
Sbjct: 184 VNPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRR---------------- 227
Query: 230 NSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVL 289
+++ Y F+ G + V+
Sbjct: 228 --------------------------------LHVPRYRPFDFQGPAQD---------VM 246
Query: 290 EAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKM-AFETEDSSRIS 348
EAV LAA+G+PF V Y+PR + EF V S V A+ W G +M E E+
Sbjct: 247 EAVRLAAAGRPFTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAVVRMEVMEDENRQHTV 306
Query: 349 WFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLV 394
W G +++++ + WR+L++ W L + V+ W V
Sbjct: 307 WVHGRVNAIR--------QNIWRMLEIIWGVDPPLATTRSVNAWQV 344
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 76/104 (73%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F KTLT SD + GGFSVPR AE IFP LD++ PP Q +VAKD+H W FRHIYRG
Sbjct: 8 FCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQ 67
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
P+RHLLTTGWS FV+ K+L AGDS++F+R L +GIRRA +
Sbjct: 68 PKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANR 111
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
PF + Y PRA+ EF V + AM GMRF+M FETE+ + +MGT++ +
Sbjct: 143 PFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECG-VRRYMGTVTGISD 201
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
DP+ W NS WR LQ+ WDE RVS W +E V L+PF P+
Sbjct: 202 LDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIEPV-------LTPFYICPPPFFRPR 254
Query: 420 QLDFPFDGQFTMP 432
F GQ MP
Sbjct: 255 -----FSGQPGMP 262
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 624 VGRTLDLSVLSSYEELYRRLAIMFGIE-------RSDMLSHVLYQDASGAIKRTGDEPFS 676
VGR++D++ Y+EL LA MFGIE SD ++Y D I GD+P+
Sbjct: 929 VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDW--KLVYVDHENDILLVGDDPWE 986
Query: 677 DFMKSAKRLTIL 688
+F+ + + IL
Sbjct: 987 EFVNCVQSIKIL 998
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 121/255 (47%), Gaps = 54/255 (21%)
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
S + GGFSV R A+ P LD T PP Q +VAKD+HG W+FRHI+RG PRRHLL
Sbjct: 2 SGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLLQ 61
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTG 239
+GWS FV+ K+LVAGD+ +FLR + G+L VG+RRA + + SN S V
Sbjct: 62 SGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQL------------SNIASSVIS 109
Query: 240 NPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGK 299
+ +M+L + + NT+
Sbjct: 110 -------------------SHSMHLGVLATAWHAINTK---------------------T 129
Query: 300 PFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y PR S EF + +++ + G RFKM FE E++ F GTI
Sbjct: 130 MFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQR-FTGTIVGSDN 188
Query: 360 ADPISWPNSPWRLLQ 374
D + WP S WR L+
Sbjct: 189 LDQL-WPESSWRSLK 202
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 81/124 (65%), Gaps = 12/124 (9%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRL------------DYTADPPV 150
++ + P F KTLT SD + GGFSVPR AE FP L DY P
Sbjct: 23 AEKKPRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVRPS 82
Query: 151 QTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVG 210
Q ++A D+HG WKFRHIYRG PRRHLLT GWS+FVN+KKLV+GD+++FLR DG L +G
Sbjct: 83 QELIAVDLHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLG 142
Query: 211 IRRA 214
+RRA
Sbjct: 143 VRRA 146
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 73/141 (51%), Gaps = 5/141 (3%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
+L +VA + K F + + PR+ EF V + ++ + GMRF++ +E+ED++
Sbjct: 167 ILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANE 226
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIHL 405
S G IS + DPI WP S W+ L V WD+ + RVSPW +E V ++ V H
Sbjct: 227 RS--AGLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGGSVSVTHS 284
Query: 406 SPFSPARKKLRLPQ-QLDFPF 425
R KL PQ LD PF
Sbjct: 285 LSSGSKRTKLHFPQGSLDTPF 305
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 105/207 (50%), Gaps = 16/207 (7%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQGH E S + +P + CRV ++
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIH 86
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ +DE Y +I L+P + +N + + SF K LT SD +
Sbjct: 87 LKVENNSDETYVEITLMPDTTQVVIPTENENQFRPIVN--------SFTKVLTASDTSAQ 138
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
G FSVP A P LD + P Q ++A D+HG W+F+H YR PR TTGW+ F
Sbjct: 139 GEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNAF 195
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIR 212
KKLV GD IVF R + G+L VGIR
Sbjct: 196 TTSKKLVVGDVIVFARGETGELRVGIR 222
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 100/174 (57%), Gaps = 11/174 (6%)
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF 113
P + CRV +++ ++ +DE YA+I L+P + N + + SF
Sbjct: 131 PSKLQCRVIAIQLKVENNSDETYAEITLMPDTTQVVIPTQNQNQFRPLVN--------SF 182
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
K LT SD + GGFSVP+ A P LD + P Q ++A D+HG W+FRHIYRGT
Sbjct: 183 TKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTA 242
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSS 227
+RHLLT GW+ F KKLV GD IVF+R + G+L VGIRRA G GN PSS
Sbjct: 243 QRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRA--GHQQGN-IPSS 293
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 19/29 (65%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAE 39
QLW CAG + IP L V+YFPQGH E
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIE 55
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 74/97 (76%)
Query: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 2 SDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLLT 61
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
TGWS FV QK LV+GD+++FLR ++G+L +GIRRA +
Sbjct: 62 TGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASR 98
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL A A A S K F + Y PRAS EF + + GMRFKM FETED++
Sbjct: 117 VLAAAANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAE 176
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+ G I+ + DP WP S WR L V WDE + +RVSPW +E
Sbjct: 177 RR-YTGIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIE 224
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE----RSDMLSHVLYQDASGAIKRTG 671
KV + VGR +DLS L Y+EL L +F +E D V+Y D+ + G
Sbjct: 674 KVHKQGNAVGRAVDLSKLDGYDELISELERLFNMEGLLNDPDKGWQVVYTDSEDDMMLVG 733
Query: 672 DEPFSDFMKSAKRLTILMGSGSDSVGRTWITGM 704
D+P+ +F ++ I + + W GM
Sbjct: 734 DDPWQEFCNIVCKILIY----THEELKKWTPGM 762
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 14/175 (8%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLI 57
V ++ +LWHACAG +V +P V+YFPQGH E S++ PS + +P I
Sbjct: 15 VNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSFN-LPSKI 73
Query: 58 FCRVSSLKFLADSETDEVYAKIKLVPIP-ANEIDFEDNNLSLNSVGSDSESEKPASFAKT 116
C+V ++ A+ ETDEVYA++ L+P P +EI D L + +S SF KT
Sbjct: 74 LCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLP------EPQSCTVHSFCKT 127
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
LT SD + GGFSV R A+ P LD + +PP Q +VAKD+HG W FRHI+RG
Sbjct: 128 LTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHFRHIFRG 182
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 108/209 (51%), Gaps = 24/209 (11%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPPLIFCRVSSLK 65
QLW CAG + P + E + S+N IP I C V S+K
Sbjct: 26 QLWKLCAGPLFDPPKI-----------GEELVTSINDELCQLKPVFNIPSKIRCNVFSIK 74
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
++ TDE+YA+I L+P + + + + + ++ + F K L+ SD +
Sbjct: 75 LKVETTTDEIYAEISLLP--------DTSEVEIPTSKCENNIQNIKCFTKVLSASDTSKK 126
Query: 126 GGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTF 185
GGF + + A P LD + P Q + A D+HG WKF+H +GTP+RHL T+GW+ F
Sbjct: 127 GGFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHLFTSGWNEF 186
Query: 186 VNQKKLVAGDSIVFLRAQDGDLCVGIRRA 214
KKLV GDS +FLR ++G+ VGI++A
Sbjct: 187 AKAKKLVVGDSFIFLRGENGESRVGIKKA 215
>gi|226502210|ref|NP_001146541.1| uncharacterized protein LOC100280136 [Zea mays]
gi|219887747|gb|ACL54248.1| unknown [Zea mays]
Length = 173
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/176 (46%), Positives = 115/176 (65%), Gaps = 15/176 (8%)
Query: 535 LLFGQPIRTEQQISHSCSDDVVSQVLGKSSSDGH---SDKVKASSDGS--GSTHEQRISI 589
+LFG+ I TEQQIS +VV + KS SD +++ ++SD S G +++ S
Sbjct: 1 MLFGKAILTEQQISLG-GGNVVPALAKKSPSDDDDDVAERTVSNSDVSSPGRSNQDGTSS 59
Query: 590 EKSSSSEFFW------NRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRL 643
++ W NR+ + L GHCKVF++SEDVGRTLDLS ++SYEELY+RL
Sbjct: 60 GGGPAARACWQEEECNNRAAGSEDDLL--GHCKVFMQSEDVGRTLDLSAVASYEELYQRL 117
Query: 644 AIMFGIERSDMLSHVLYQ-DASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
A MFG++++++ SHV Y+ DASGA+K GDEPFS+F K+A+RLTIL SDS+ R
Sbjct: 118 ADMFGVDKAELTSHVFYRDDASGALKHPGDEPFSEFTKTARRLTILTDESSDSLAR 173
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 98/192 (51%), Gaps = 35/192 (18%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+K ++ +LWHACAG +V +P + S V YFPQGH+E
Sbjct: 18 KKCLNSELWHACAGPLVSLPTVGSRVVYFPQGHSEQ------------------------ 53
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLTQSDAN 123
AD ETDEVYA++ L P+ E + V S++P + F KTLT SD +
Sbjct: 54 ---ADVETDEVYAQMTLQPLTPQE-----QKDTFLPVELGIPSKQPTNYFCKTLTASDTS 105
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
GGFSVPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG R L W
Sbjct: 106 THGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQSWP 163
Query: 184 TFVNQKKLVAGD 195
+ V D
Sbjct: 164 VITLSGRRVGRD 175
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 125/269 (46%), Gaps = 56/269 (20%)
Query: 154 VAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
+AKD+HG WKFRHI+RG P+RHLLTTGWS FV+ K+LVA GD + I
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVA-----------GDSVLFI-- 47
Query: 214 AKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSS 273
WN NN + R N S S
Sbjct: 48 ---------------WNDNNQLLLG------------------IRRANRPQTVMPSSVLS 74
Query: 274 GNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCG 332
++ G ++ A A++ F + Y PRAS EF + VKA G
Sbjct: 75 SDSMHIG------LLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVG 128
Query: 333 MRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPW 392
MRF+M FETE+SS + +MGTI+ + D + WPNS WR ++V WDE + RVS W
Sbjct: 129 MRFRMLFETEESS-VRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLW 187
Query: 393 LVELVSNMPVIHLSPFSPARKKLRLPQQL 421
+E ++ P ++ SPF P R K P L
Sbjct: 188 EIEPLTTFP-MYPSPF-PLRLKRPWPTGL 214
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIE--RSDMLS---HVLYQDASGAIKR 669
KV+ +S GR+LD++ SSY EL R L +FG+E D L +++ D +
Sbjct: 609 VKVY-KSGTYGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLL 667
Query: 670 TGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ +F+ + + IL +G+
Sbjct: 668 VGDDPWQEFVSTVSCIKILSPQEVQQMGK 696
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/268 (35%), Positives = 131/268 (48%), Gaps = 54/268 (20%)
Query: 154 VAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
+AKD+HG WKFRHI+RG P+RHLLTTGWS FV+ K+LVAGDS++F+ + L +GIRR
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 214 AKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSS 273
A + PSS +S++ L + + N F
Sbjct: 61 ANR---PQTVMPSSVLSSDSMHI----------GLLAAAAHAASTNSR--------FTIF 99
Query: 274 GNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGM 333
N R + E V+ V K + VY+ R + MR
Sbjct: 100 YNPRASPS----EFVIPLV------KYVKAVYHTR------------ISVGMR------- 130
Query: 334 RFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWL 393
F+M FETE+SS + +MGTI+ + D + WPNS WR ++V WDE + RVS W
Sbjct: 131 -FRMLFETEESS-VRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWE 188
Query: 394 VELVSNMPVIHLSPFSPARKKLRLPQQL 421
+E ++ P ++ SPF P R K P L
Sbjct: 189 IEPLTTFP-MYPSPF-PLRLKRPWPTGL 214
>gi|124359420|gb|ABN05873.1| Auxin response factor [Medicago truncatula]
Length = 98
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/95 (62%), Positives = 73/95 (76%), Gaps = 1/95 (1%)
Query: 281 GRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFE 340
G+VK V+EAV L + +PF+VVYYPR+ TPEF VK S + +++ W GMRFKM E
Sbjct: 5 GKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTSLIGITLQIRWCPGMRFKMPIE 64
Query: 341 TEDSSRISWFMGTISSVQVADPISWPNSPWRLLQV 375
TEDSSRISWF+GT++SVQ ADP SWP+S WRLLQV
Sbjct: 65 TEDSSRISWFIGTVASVQAADP-SWPDSLWRLLQV 98
>gi|170677652|gb|ACB30898.1| ARF10 [Arabidopsis thaliana]
Length = 162
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 106/169 (62%), Gaps = 27/169 (15%)
Query: 379 EPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDG-QFTM--PLFS 435
EPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+PQ +FPFDG +F + P F+
Sbjct: 1 EPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQPFEFPFDGTKFPIFSPGFA 59
Query: 436 GNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG---------ISSSDFHVNNKLQS-G 480
N G S +C LS +N AGIQGAR AQ FG ++ S + NNKL S
Sbjct: 60 NNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTSNNKLHSPA 117
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI 529
+FLSS F P + + ++N N+SC LTMGN +K +++
Sbjct: 118 MFLSS---FNPRHHHYQARDSENSN---NISCSLTMGNPAMVQDKKKSV 160
>gi|170677622|gb|ACB30883.1| ARF10 [Arabidopsis thaliana]
gi|170677624|gb|ACB30884.1| ARF10 [Arabidopsis thaliana]
gi|170677626|gb|ACB30885.1| ARF10 [Arabidopsis thaliana]
gi|170677628|gb|ACB30886.1| ARF10 [Arabidopsis thaliana]
gi|170677632|gb|ACB30888.1| ARF10 [Arabidopsis thaliana]
gi|170677634|gb|ACB30889.1| ARF10 [Arabidopsis thaliana]
gi|170677636|gb|ACB30890.1| ARF10 [Arabidopsis thaliana]
gi|170677638|gb|ACB30891.1| ARF10 [Arabidopsis thaliana]
gi|170677642|gb|ACB30893.1| ARF10 [Arabidopsis thaliana]
gi|170677644|gb|ACB30894.1| ARF10 [Arabidopsis thaliana]
gi|170677646|gb|ACB30895.1| ARF10 [Arabidopsis thaliana]
gi|170677650|gb|ACB30897.1| ARF10 [Arabidopsis thaliana]
gi|170677654|gb|ACB30899.1| ARF10 [Arabidopsis thaliana]
gi|170677656|gb|ACB30900.1| ARF10 [Arabidopsis thaliana]
gi|170677658|gb|ACB30901.1| ARF10 [Arabidopsis thaliana]
gi|170677660|gb|ACB30902.1| ARF10 [Arabidopsis thaliana]
gi|170677666|gb|ACB30905.1| ARF10 [Arabidopsis thaliana]
Length = 162
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 106/169 (62%), Gaps = 27/169 (15%)
Query: 379 EPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDG-QFTM--PLFS 435
EPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+PQ +FPFDG +F + P F+
Sbjct: 1 EPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQPFEFPFDGTKFPIFSPGFA 59
Query: 436 GNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG---------ISSSDFHVNNKLQS-G 480
N G S +C LS +N AGIQGAR AQ FG ++ S + NNKL S
Sbjct: 60 NNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKLHSPA 117
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI 529
+FLSS F P + + ++N N+SC LTMGN +K +++
Sbjct: 118 MFLSS---FNPRHHHYQARDSENSN---NISCSLTMGNPAMVQDKKKSV 160
>gi|170677630|gb|ACB30887.1| ARF10 [Arabidopsis thaliana]
gi|170677640|gb|ACB30892.1| ARF10 [Arabidopsis thaliana]
gi|170677648|gb|ACB30896.1| ARF10 [Arabidopsis thaliana]
gi|170677664|gb|ACB30904.1| ARF10 [Arabidopsis thaliana]
Length = 161
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 103/168 (61%), Gaps = 26/168 (15%)
Query: 379 EPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDG-QFTM--PLFS 435
EPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+PQ +FPFDG +F + P F+
Sbjct: 1 EPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQPFEFPFDGTKFPIFSPGFA 59
Query: 436 GNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG--------ISSSDFHVNNKLQS-GL 481
N G S +C LS +N AGIQGAR AQ FG + + NKL S +
Sbjct: 60 NNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNKLHSPAM 117
Query: 482 FLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI 529
FLSS F P + + ++N N+SC LTMGN +K +++
Sbjct: 118 FLSS---FNPRHHHYQARDSENSN---NISCSLTMGNPAMVQDKKKSV 159
>gi|294460260|gb|ADE75712.1| unknown [Picea sitchensis]
Length = 264
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 116/238 (48%), Gaps = 50/238 (21%)
Query: 511 SCLLTMGNSNQNLEKSENI-------KKHQFLLFGQPIRTEQ--------QISHSCSDDV 555
S LLT+GNS+QN +K+ + K F LFG+PI T Q Q S SD
Sbjct: 27 SSLLTVGNSSQNEQKTSSGSASSSTPKGSSFFLFGKPIHTAQSPKSYQQHQSGLSSSDGA 86
Query: 556 VSQVLGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTE-SGLDTG- 613
+ ++ S G S ++ + Q++ ++ N +++ LD
Sbjct: 87 AFHMFTENGSPGQSSNTSSNGNQEALERVQKLITGGRDGTKLSENYGLRLSHGESLDYAG 146
Query: 614 ---------------------------------HCKVFLESEDVGRTLDLSVLSSYEELY 640
HCKVF E+E+VGRTLDLS+ +YE+LY
Sbjct: 147 TKGVRSLQWFKDQASILKLEKDKQENTCEDSIVHCKVFKETEEVGRTLDLSLFCTYEQLY 206
Query: 641 RRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
RLA MFGIE S++ + VLY+ G+++ GDEP+ DFMK+ +RLTIL SGSD++ R
Sbjct: 207 DRLAKMFGIEESELSNRVLYKGLGGSVRHAGDEPYKDFMKTVRRLTILSDSGSDNMAR 264
>gi|170677662|gb|ACB30903.1| ARF10 [Arabidopsis thaliana]
Length = 162
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 105/169 (62%), Gaps = 27/169 (15%)
Query: 379 EPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDG-QFTM--PLFS 435
EPDLLQNVKRVSPWLVELVSNMP IHLSPFSP RKK+R+PQ +FPF G +F + P F+
Sbjct: 1 EPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQPFEFPFHGTKFPIFSPGFA 59
Query: 436 GNPLGPSSPLCCLS---DNTSAGIQGARHAQ--FG---------ISSSDFHVNNKLQS-G 480
N G S +C LS +N AGIQGAR AQ FG ++ S + NNKL S
Sbjct: 60 NNGGGES--MCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSYTGNNKLHSPA 117
Query: 481 LFLSSLQRFTPNSRDFDGILTSHTNSSENLSCLLTMGNSNQNLEKSENI 529
+FLSS F P + + ++N N+SC LTMGN +K +++
Sbjct: 118 MFLSS---FNPRHHHYQARDSENSN---NISCSLTMGNPAMVQDKKKSV 160
>gi|294464581|gb|ADE77800.1| unknown [Picea sitchensis]
Length = 264
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 126/245 (51%), Gaps = 62/245 (25%)
Query: 510 LSCLLTMGNSNQNLEK------SENIKKHQFLLFGQPIRTEQQ----------------- 546
LSCLLTMGNS+Q+ K S K FLLFG+PI T+Q
Sbjct: 26 LSCLLTMGNSSQSEHKISSCSTSSTSKSTSFLLFGKPIHTDQSPRSQQQQQQSGVSSADG 85
Query: 547 -------------ISHSCSDDVVSQV------LGKSSSDGHSDKVKASSDGSGSTHEQRI 587
++++ S DV +V L K + G K+ SD S TH+
Sbjct: 86 LGFQSFNDTGSPGLTNNSSTDVNQEVEDRVQKLKKEKAGG--SKI---SDNSSLTHQHGN 140
Query: 588 SIEKSSSSEFFWNRSFQVTESGL----DTGH----------CKVFLESEDVGRTLDLSVL 633
S++ + ++ + F+ E+G+ H CKVF E+E+VGRTLDL++
Sbjct: 141 SLDAAGTNGVNGLQRFK-HETGILSLKKNTHEKTSEDTVLPCKVFSETEEVGRTLDLTMF 199
Query: 634 SSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTILMGSGS 693
SSYE+LY RL MFGIE ++ + VLY+D ++ G+EP+ DFMK+ +RLTIL SGS
Sbjct: 200 SSYEQLYDRLRKMFGIEDLELSNRVLYKDIGNIMRHAGEEPYGDFMKTVRRLTILSESGS 259
Query: 694 DSVGR 698
D++ R
Sbjct: 260 DNMSR 264
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 9/127 (7%)
Query: 46 NFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS 105
N+PS +P + C+V ++ AD +TDEVYA++ L P+ + E N + S+GS +
Sbjct: 49 NYPS---LPSQLLCQVHNITMHADKDTDEVYAQMMLQPV-----NSETNVFPIQSLGSYA 100
Query: 106 ESEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWK 164
+S+ PA F K LT SD + GGFS+PR A +FP+LDY+ PP Q ++ +D+H +W
Sbjct: 101 KSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMWI 160
Query: 165 FRHIYRG 171
FRHIYRG
Sbjct: 161 FRHIYRG 167
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 81/127 (63%), Gaps = 9/127 (7%)
Query: 46 NFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDS 105
N+PS +P + C+V ++ AD +TDEVYA++ L P+ + E + + S+GS +
Sbjct: 49 NYPS---LPSQLLCQVHNITMHADKDTDEVYAQMMLQPV-----NSETDVFPIQSLGSYA 100
Query: 106 ESEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWK 164
+S+ PA F K LT SD + GGFS+PR A +FP+LDY+ PP Q ++ +D+H +W
Sbjct: 101 KSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLDYSMQPPNQELIVQDLHDNMWI 160
Query: 165 FRHIYRG 171
FRHIYRG
Sbjct: 161 FRHIYRG 167
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 75/113 (66%), Gaps = 6/113 (5%)
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLTQSDANNGGGFS 129
ETDEVYA++ L P+ E + + +G S++P++ F KTL SD + GGFS
Sbjct: 69 ETDEVYAQMTLQPLSPQE---QKDAYLPAELGV--PSKQPSNYFCKTLIASDTSTHGGFS 123
Query: 130 VPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGW 182
VPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLLTTG+
Sbjct: 124 VPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 2 KEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPP 55
+E +K ++ +LWHACAG +V +P + + V YFPQGH+E S N P+ +PP
Sbjct: 15 EEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPP 74
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C++ + AD ETDEVYA++ L P+ E N+ L + + F K
Sbjct: 75 QLICQLHDVTMHADVETDEVYAQMTLQPLNPQ----EQNDPYLPAEMGIMSKQPTNYFCK 130
Query: 116 TLTQSDANNGGGFSVPRYCAETIFPRL 142
TLT SD + GGFSVPR AE +FP L
Sbjct: 131 TLTASDTSTHGGFSVPRRAAERVFPPL 157
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 2/103 (1%)
Query: 301 FEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + + PRAS EF + S +KA GMRF+M FETE+SS + +MGTI+ V
Sbjct: 289 FTIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESS-VRRYMGTITEVSD 347
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
ADP+ WP+S WR ++V WDE + RVS W +E ++ P+
Sbjct: 348 ADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFPM 390
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 616 KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGI-------ERSDMLSHVLYQDASGAIK 668
KV+ +S VGR+LD++ S+Y EL L MFGI +RS +++ D +
Sbjct: 739 KVY-KSGSVGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGW--QLVFVDRENDVL 795
Query: 669 RTGDEPFSDFMKSAKRLTILMGSGSDSVGR 698
GD+P+ F+ S + IL +G+
Sbjct: 796 LLGDDPWESFVNSVWYIKILSPEDVHKMGK 825
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 74/112 (66%), Gaps = 6/112 (5%)
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTLTQSDANNGGGFS 129
ETDEVYA++ L P+ E + + +G S++P++ F KTL SD + GGFS
Sbjct: 96 ETDEVYAQMTLQPLSPQE---QKDAYLPAELGV--PSKQPSNYFCKTLIASDTSTHGGFS 150
Query: 130 VPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTG 181
VPR AE +FP LD++ PP Q ++A+D+H WKFRHI+RG P+RHLLTTG
Sbjct: 151 VPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 95/175 (54%), Gaps = 16/175 (9%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH------SLGSVNFPSSSRIPPLIFCRVSSL 64
+LW ACAG +V +P V Y+PQGH E G + P + +P IFC+V ++
Sbjct: 47 ELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVYN-LPSKIFCKVINV 105
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA---SFAKTLTQSD 121
+ A++ TDEV+A+I L+P ++ LSL G+ + A SF+K LT SD
Sbjct: 106 QLKAEAGTDEVFAQITLLPETKQDV------LSLKEDGNSLPLPRKADLRSFSKKLTSSD 159
Query: 122 ANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRH 176
+ GGFSV + AE P +D + +PP Q +VAKD+HGE + R R + H
Sbjct: 160 TSTHGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMHGENGELRIGLRRAMKLH 214
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 3/118 (2%)
Query: 297 SGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISS 356
+G F V Y P + EF + + + + G F M FE E+ + GTI
Sbjct: 241 TGSIFTVYYRPWTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECAE-QRSEGTIVG 299
Query: 357 VQVADPISWPNSPWRLLQVTWDEP-DLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
+ D I WPNS WR L+ WD + + RVSPW++ + + + SP P++K
Sbjct: 300 NEDVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMIVPIEPIKK-YDSPLHPSKK 356
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 143/368 (38%), Gaps = 111/368 (30%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+LW+ CAG + +P V+YFPQGH E + +S
Sbjct: 21 KLWNICAGPLCVLPKPGEKVYYFPQGHIE--------------------------LIENS 54
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSV 130
DE+ + +P+ L V D + +K
Sbjct: 55 TRDELDHIRPIFDLPSK--------LRCRVVAIDRKVDKNTDEV---------------- 90
Query: 131 PRYCAETIFPRLDYTADP-PVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT--GWSTFVN 187
Y ++ P + P Q +VAKD++G+ W F+H++RGTP+RH+ T+ GWS F
Sbjct: 91 --YAQISLMPDTTDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRHMFTSGGGWSVFAT 148
Query: 188 QKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSC 247
K+L+ GD V LR ++G+L GIRRAK G PSS ++N C+
Sbjct: 149 TKRLIVGDIFVLLRGENGELRFGIRRAKHQQG---HIPSSVISAN---CMQHG------- 195
Query: 248 FLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYP 307
V+ +V A K V Y
Sbjct: 196 ----------------------------------------VIASVVNAFKTKCMFNVVY- 214
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISWPN 367
+ S+ +F + AM +++ G RF+M FE +D S + GTI V P W +
Sbjct: 215 KPSSSQFVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE-KRYDGTIIGVNDMSP-HWKD 272
Query: 368 SPWRLLQV 375
S WR L++
Sbjct: 273 SEWRSLKI 280
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 575 SSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLS 634
+SD ++ I+ E ++S F G+D KV ++ + R +DL+ +
Sbjct: 341 NSDQMIQPRKEDITTEATTSCLLF----------GVDL--TKVHMQGVAISRAVDLTAMH 388
Query: 635 SYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
Y +L ++L +F ++ R+ +++ + GA GD+P+ +F AKR+ I
Sbjct: 389 GYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFI 444
>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
Length = 496
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 5/144 (3%)
Query: 8 IDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN--FPSSSRIPPLIFCRVSSLK 65
ID +W ACA + +IP + + V YFP+GHAE + PS+ R C ++++
Sbjct: 24 IDRLVWLACAAPLSRIPVVGTQVSYFPEGHAEQCPAPLPDPLPSAHR---FFLCTITAVD 80
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNG 125
AD+ T E YA I L+P+ + + +++ES++ +AK LTQSDANNG
Sbjct: 81 LSADTTTGEPYATISLLPLRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSDANNG 140
Query: 126 GGFSVPRYCAETIFPRLDYTADPP 149
GGFSVPR CA+ IFP L+ DPP
Sbjct: 141 GGFSVPRLCADHIFPALNLDDDPP 164
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 93/216 (43%), Gaps = 31/216 (14%)
Query: 285 PEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFK-MAFETED 343
P+ V+EAV LAA F V YYPR EF V V + W CGM+ + E ED
Sbjct: 217 PQEVMEAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQVMEAED 276
Query: 344 SSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKR--VSPWLVELVSNMP 401
+ R++W GT+++++ WR L+V WD ++K V+PW V+ V
Sbjct: 277 TRRLAWLNGTLTNLRH-------QQIWRTLEVEWDASAASSSMKNRFVNPWQVQPVD--- 326
Query: 402 VIHLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGAR- 460
F P L++ + + P+ +G+ L L A IQGAR
Sbjct: 327 ------FPPLPMGLKI-------SNNNISAPVCNGDSLLVPPILMHPQPQPPADIQGARH 373
Query: 461 ---HAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNS 493
HA I SS + Q LF LQ P++
Sbjct: 374 NNGHAYADIPSSSTPSMVRTQQ-LFPRDLQILVPHT 408
>gi|170677670|gb|ACB30907.1| ARF16 [Arabidopsis thaliana]
gi|170677674|gb|ACB30909.1| ARF16 [Arabidopsis thaliana]
gi|170677676|gb|ACB30910.1| ARF16 [Arabidopsis thaliana]
gi|170677682|gb|ACB30913.1| ARF16 [Arabidopsis thaliana]
gi|170677684|gb|ACB30914.1| ARF16 [Arabidopsis thaliana]
gi|170677686|gb|ACB30915.1| ARF16 [Arabidopsis thaliana]
gi|170677688|gb|ACB30916.1| ARF16 [Arabidopsis thaliana]
gi|170677692|gb|ACB30918.1| ARF16 [Arabidopsis thaliana]
gi|170677696|gb|ACB30920.1| ARF16 [Arabidopsis thaliana]
gi|170677698|gb|ACB30921.1| ARF16 [Arabidopsis thaliana]
gi|170677700|gb|ACB30922.1| ARF16 [Arabidopsis thaliana]
gi|170677702|gb|ACB30923.1| ARF16 [Arabidopsis thaliana]
gi|170677706|gb|ACB30925.1| ARF16 [Arabidopsis thaliana]
gi|170677708|gb|ACB30926.1| ARF16 [Arabidopsis thaliana]
Length = 160
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/170 (42%), Positives = 90/170 (52%), Gaps = 17/170 (10%)
Query: 384 QNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPS 442
QNVKRV+PWLVELVSN+ I L+ FSP RKK+RLPQ D+ +P F NPL S
Sbjct: 1 QNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRS 60
Query: 443 SPLCCLSDNTSAGIQGAR---HAQFGISSSDFH---VNNKLQSGLFLSSLQRFTPNSRDF 496
SPL + DN G+QGAR H +G+SSSD H +N S + R+
Sbjct: 61 SPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLGLRNI 120
Query: 497 DGILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQ 546
D +E C LTMG + N KS KK +LFG+ I E+Q
Sbjct: 121 D-------TKNEKGFCFLTMGTTPCNDTKS---KKSHIVLFGKLILPEEQ 160
>gi|170677668|gb|ACB30906.1| ARF16 [Arabidopsis thaliana]
gi|170677672|gb|ACB30908.1| ARF16 [Arabidopsis thaliana]
gi|170677678|gb|ACB30911.1| ARF16 [Arabidopsis thaliana]
gi|170677680|gb|ACB30912.1| ARF16 [Arabidopsis thaliana]
gi|170677690|gb|ACB30917.1| ARF16 [Arabidopsis thaliana]
gi|170677694|gb|ACB30919.1| ARF16 [Arabidopsis thaliana]
gi|170677704|gb|ACB30924.1| ARF16 [Arabidopsis thaliana]
gi|170677710|gb|ACB30927.1| ARF16 [Arabidopsis thaliana]
gi|170677712|gb|ACB30928.1| ARF16 [Arabidopsis thaliana]
gi|170677714|gb|ACB30929.1| ARF16 [Arabidopsis thaliana]
Length = 159
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 90/169 (53%), Gaps = 16/169 (9%)
Query: 384 QNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDF-PFDGQFTMPLFSGNPLGPS 442
QNVKRV+PWLVELVSN+ I L+ FSP RKK+RLPQ D+ +P F NPL S
Sbjct: 1 QNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINSIPVPSFPSNPLIRS 60
Query: 443 SPLCCLSDNTSAGIQGAR---HAQFGISSSDFH--VNNKLQSGLFLSSLQRFTPNSRDFD 497
SPL + DN G+QGAR H +G+SSSD H N+ S + R+ D
Sbjct: 61 SPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPPSSLQLSPSLGLRNID 120
Query: 498 GILTSHTNSSENLSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQ 546
+E C LTMG + N KS KK +LFG+ I E+Q
Sbjct: 121 -------TKNEKGFCFLTMGTTPCNDTKS---KKSHIVLFGKLILPEEQ 159
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 102 bits (253), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/63 (68%), Positives = 49/63 (77%)
Query: 137 TIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDS 196
T F RLDYTA+PP +T++AKDVHGE WKFRHIYRG PRRHLL TGWS FVN+K G
Sbjct: 8 TTFSRLDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTR 67
Query: 197 IVF 199
+ F
Sbjct: 68 LCF 70
>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
Length = 585
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 106/212 (50%), Gaps = 13/212 (6%)
Query: 6 KSIDPQLWHACAGSMV-QIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+ + +W ACA ++P + S V+YFP GHAE L P RI C+V+ +
Sbjct: 274 QQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---FLCKVTDV 330
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
+ L + T+E A I LVPI A++ F+ + + ++S+ SF K LT +D
Sbjct: 331 R-LGAAATNEALATISLVPIAADDHAFQLQAPADPDP-APAQSQSLVSFVKPLTYTDVTK 388
Query: 125 GGGFSVPRY-CAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
F VP+ A + P + D P++ KD+ G+ W F + ++ R + GW
Sbjct: 389 NR-FMVPKDDAAAGVLPHIQLNDDVPLRI---KDLSGKEWAFNYTWKAHTR--MFRNGWM 442
Query: 184 TFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAK 215
F N LV GD+ VF+R +G++ + +RR +
Sbjct: 443 EFSNANGLVTGDNAVFMRRGNGEMFMAVRRTR 474
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 12 LWHACAGSMV-QIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+W ACA ++P + S V+YFP GHAE L P RI C+V+ ++ L +
Sbjct: 257 MWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---FLCKVTDVR-LGAA 312
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSV 130
T+E A I LVPI A++ F+ + + ++S+ SF K LT +D F V
Sbjct: 313 ATNEALATISLVPIAADDHAFQLQAPADPDP-APAQSQSLVSFVKPLTYTDVTKNR-FMV 370
Query: 131 PRY-CAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQK 189
P+ A + P + D P++ KD+ G+ W F + ++ R + GW F N
Sbjct: 371 PKDDAAAGVLPHIQLNDDVPLRI---KDLSGKEWAFNYTWKAHTR--MFRNGWMEFSNAN 425
Query: 190 KLVAGDSIVFLRAQDGDLCVGIRRAK 215
LV GD+ VF+R +G++ + +RR +
Sbjct: 426 GLVTGDNAVFMRRGNGEMFMAVRRTR 451
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 104/206 (50%), Gaps = 13/206 (6%)
Query: 12 LWHACAGSMV-QIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADS 70
+W ACA ++P + S V+YFP GHAE L P RI C+V+ ++ L +
Sbjct: 240 MWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSRPQEPLPGRI---FLCKVTDVR-LGAA 295
Query: 71 ETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSV 130
T+E A I LVPI A++ F+ + + ++S+ SF K LT +D F V
Sbjct: 296 ATNEALATISLVPIAADDHAFQLQAPADPDP-APAQSQSLVSFVKPLTYTDVTKNR-FMV 353
Query: 131 PRY-CAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQK 189
P+ A + P + D P++ KD+ G+ W F + ++ R + GW F N
Sbjct: 354 PKDDAAAGVLPHIQLNDDVPLRI---KDLSGKEWAFNYTWKAHTR--MFRNGWMEFSNAN 408
Query: 190 KLVAGDSIVFLRAQDGDLCVGIRRAK 215
LV GD+ VF+R +G++ + +RR +
Sbjct: 409 GLVTGDNAVFMRRGNGEMFMAVRRTR 434
>gi|20198124|gb|AAM15413.1| hypothetical protein [Arabidopsis thaliana]
Length = 153
Score = 99.4 bits (246), Expect = 6e-18, Method: Composition-based stats.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 39/184 (21%)
Query: 200 LRAQDGDLCVGIRRA--KKGIGG-----GNEYPSSGWNSNNGSCVTGNPFGGFSCFLREE 252
+R ++ +G+RRA +GG G+EY S + SN G + +E
Sbjct: 1 MRKSADEMFIGVRRAPISSNVGGTSFYGGDEY-CSYYQSNGG--------------VAKE 45
Query: 253 ENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTP 312
++ A+ G F +G G++ E V EA+ AA G PFEVVYYP A
Sbjct: 46 DDGSAKKG---------FRRTGK-----GKLTAEAVSEAINRAAQGLPFEVVYYPTAGWS 91
Query: 313 EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI-SSVQVADPISWPNSPWR 371
+F VKA V+A+M + W G R KMA ETEDSSRI+WF G + + Q P W SPW+
Sbjct: 92 DFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRITWFQGIVFYTYQETGP--WRGSPWK 149
Query: 372 LLQV 375
LQV
Sbjct: 150 QLQV 153
>gi|62865743|gb|AAY17064.1| m-160-1_1 [Polytrichum juniperinum]
Length = 308
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%)
Query: 614 HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDE 673
HCKVF E E+VGRTLDLS+ +SY EL+ RLA MF + S V+YQDA G++K GDE
Sbjct: 222 HCKVFREGEEVGRTLDLSIFTSYYELFNRLAAMFSVPTSKFEHRVVYQDAEGSMKHVGDE 281
Query: 674 PFSDFMKSAKRLTIL 688
P+ +F+K+ +RLTIL
Sbjct: 282 PYRNFVKAVRRLTIL 296
>gi|357489513|ref|XP_003615044.1| Auxin response factor [Medicago truncatula]
gi|355516379|gb|AES98002.1| Auxin response factor [Medicago truncatula]
Length = 200
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 289 LEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRIS 348
++AV L FEV+YYPRA+ +F A+ V M++ W GM+ K+ + E+SS
Sbjct: 1 MDAVELVVKSMAFEVLYYPRANWIDFVEDANVVDDGMKISWTSGMKVKLPLKKEESSNSK 60
Query: 349 WFM----GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
GT S V A P + PN WR+LQV WDEP++ QN RV+PW VEL+++ V
Sbjct: 61 MIFYQPRGTNSDVYKA-PSNVPN--WRMLQVKWDEPEISQNPNRVNPWQVELINHTHVSS 117
Query: 405 LSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQF 464
PF P + P L+ + L C D AG+Q ARH
Sbjct: 118 EDPFIPMMEFPSTPGSLN-------------------QTLLNC--DTFPAGMQKARHDHL 156
Query: 465 GISSSDFHVNNK 476
S S +N+K
Sbjct: 157 SESGSSNFLNDK 168
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 91/177 (51%), Gaps = 25/177 (14%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSV-----NFPSSSRIPPLIFCRVSSLK 65
QLW CAG + IP L V+YFPQGH E S + +P + CRV ++
Sbjct: 4 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIH 63
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLN---SVGSDSESE-KPA--SFAKTLTQ 119
++ +DE Y +I L+P D +S N + +++E++ +P SF K LT
Sbjct: 64 LKVENNSDETYVEITLMP---------DTTVSKNLQVVIPTENENQFRPIVNSFTKVLTA 114
Query: 120 SDANNGGGFSVP-RYCAETIFPRLDYTADP----PVQTVVAKDVHGEIWKFRHIYRG 171
SD + G FSVP ++ E + P L Y D P Q ++A D+HG W+F+H YRG
Sbjct: 115 SDTSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYRG 171
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F +VY PR+S ++ V A+ + G ++ M FE +D S +F GTI +
Sbjct: 202 FIMVYKPRSS--QYIVSHEKFLDAVNNKFNVGSKYTMRFEDDDLSETRYF-GTIIGISDF 258
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV---SNMP 401
P W S WR L+V WDE K+VSPW ++ + SN+P
Sbjct: 259 SP-HWKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMSSSNVP 301
>gi|20198291|gb|AAM15506.1| hypothetical protein [Arabidopsis thaliana]
Length = 153
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 68/184 (36%), Positives = 94/184 (51%), Gaps = 39/184 (21%)
Query: 200 LRAQDGDLCVGIRRA--KKGIGG-----GNEYPSSGWNSNNGSCVTGNPFGGFSCFLREE 252
+R ++ +G+RRA +GG G+EY S + SN G + +E
Sbjct: 1 MRKSADEMFIGVRRAPISSNVGGTSFYGGDEY-CSYYQSNGG--------------VAKE 45
Query: 253 ENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTP 312
++ A+ G F +G G++ E V EA+ AA G PFEVVYYP A
Sbjct: 46 DDGSAKKG---------FRRTGK-----GKLTAEAVSEAINRAAQGLPFEVVYYPTAGWS 91
Query: 313 EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI-SSVQVADPISWPNSPWR 371
+F VKA V+A+M + W G R KMA ET+DSSRI+WF G + + Q P W SPW+
Sbjct: 92 DFVVKAEDVEASMAIFWTPGTRVKMAMETKDSSRITWFQGIVFYTYQETGP--WRGSPWK 149
Query: 372 LLQV 375
LQV
Sbjct: 150 QLQV 153
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 15/214 (7%)
Query: 7 SIDPQLWHACAGSMV-QIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLK 65
SI ++W ACA ++P + S V+YFP GHA+ P R+ C+V++++
Sbjct: 403 SITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPSRPPEPLPGRV---FLCKVTAVR 459
Query: 66 FLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDA-NN 124
D+ +E++A + L+P+ A + + + S SF K LT +DA N
Sbjct: 460 L--DATRNELFATMSLIPV-ARDQAIQPQAPADPGPSSPQVKTTLVSFVKPLTCTDAVKN 516
Query: 125 GGGFSVP-RYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWS 183
F VP R A + P+L P+ KD+HG+ W + ++ H+L++GW
Sbjct: 517 RYRFIVPKREAAMGVLPQLQLNEHVPLYI---KDMHGKEWVINYTWKEY--THMLSSGWI 571
Query: 184 TFVNQKKLVAGDSIVFLRAQD-GDLCVGIRRAKK 216
F N +LV GD++VF+R+ D G+ +G+RR K
Sbjct: 572 KFANANRLVTGDNVVFMRSMDSGERYMGLRRTLK 605
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 8 IDPQLWHACAG-SMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS------SSRIPPLIFCR 60
+D +W ACA + ++P + S VFYF GHAE FP+ + P + C
Sbjct: 16 VDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQF---CQFPAPLLEQLAVPGPRVFLCT 72
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V++++ AD+ T+E YA I L P+ +++ + + + ++ F KTL S
Sbjct: 73 VAAVRLRADALTNEAYADITLDPVADHDVP-RLLPAPAPAAAAGGQQQQLRYFVKTLMSS 131
Query: 121 DANNGGGFSVPRYCAETIFPRL-DYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
DA F+VP A+ +FP L D A VQ ++ KD+ G F + G R L
Sbjct: 132 DAEYRDRFAVPMDVAKDVFPPLVDAKA---VQPLIVKDLQGSPMTFDYGRNGN--RVTLA 186
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGD-LCVGIRRAK 215
W F + V GDS++F+R +D D L VG+RR +
Sbjct: 187 KVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQR 223
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 107 SEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
S++P++ F KTL SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKF
Sbjct: 24 SKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKF 83
Query: 166 RHIYRGTPRRHLLTT 180
RHI+RG P+RHLLTT
Sbjct: 84 RHIFRGQPKRHLLTT 98
>gi|13449367|ref|NP_085549.1| hypothetical protein ArthMp082 [Arabidopsis thaliana]
gi|45477051|sp|P92530.1|M940_ARATH RecName: Full=Uncharacterized mitochondrial protein AtMg00940;
AltName: Full=ORF164
gi|1785751|emb|CAA69835.1| unnamed protein product [Arabidopsis thaliana]
Length = 164
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 90/179 (50%), Gaps = 39/179 (21%)
Query: 200 LRAQDGDLCVGIRRA--KKGIGG-----GNEYPSSGWNSNNGSCVTGNPFGGFSCFLREE 252
+R ++ +G+RRA +GG G+EY S + SN G + +E
Sbjct: 1 MRKSADEMFIGVRRAPISSNVGGTSFYGGDEY-CSYYQSNGG--------------VAKE 45
Query: 253 ENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAASGKPFEVVYYPRASTP 312
++ A+ G F +G G++ E V EA+ AA G PFEVVYYP A
Sbjct: 46 DDGSAKKG---------FRRTGK-----GKLTAEAVSEAINRAAQGLPFEVVYYPTAGWS 91
Query: 313 EFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTI-SSVQVADPISWPNSPW 370
+F VKA V+A+M + W G R KMA ETEDSSRI+WF G + + Q P W SPW
Sbjct: 92 DFVVKAEDVEASMAIFWTPGTRVKMAMETEDSSRITWFQGIVFYTYQETGP--WRGSPW 148
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 107/217 (49%), Gaps = 18/217 (8%)
Query: 8 IDPQLWHACAG-SMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS------SSRIPPLIFCR 60
+D +W ACA + ++P + S VFYF GHAE FP+ + P + C
Sbjct: 16 VDRAMWLACAAPNSGRLPAVGSMVFYFVDGHAEQF---CQFPAPLLEQLAVPGPRVFLCT 72
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V++++ AD+ T+E YA I L P+ +++ + + + ++ F KTL S
Sbjct: 73 VAAVRLRADALTNEAYADITLDPVADHDVP-RLLPAPAPAAAAGGQQQQLRYFVKTLMSS 131
Query: 121 DANNGGGFSVPRYCAETIFPRL-DYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
DA F+VP A+ +FP L D A VQ ++ KD+ G F + G R L
Sbjct: 132 DAEYRDRFAVPMDVAKDVFPPLVDAKA---VQPLIVKDLQGSPMTFDYGRNGN--RVTLA 186
Query: 180 TGWSTFVNQKKLVAGDSIVFLRAQDGD-LCVGIRRAK 215
W F + V GDS++F+R +D D L VG+RR +
Sbjct: 187 KVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQR 223
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C+V++++ D+ +E++A + L+P+ A + + + S SF K
Sbjct: 388 VFLCKVTAVRL--DATRNELFATMSLIPV-ARDQAIQPQAPADPGPSSPQVQTTLVSFVK 444
Query: 116 TLTQSDA-NNGGGFSVP-RYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
LT +DA N F VP R A + P+L P+ KD+HG+ W + ++
Sbjct: 445 PLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVPLYI---KDMHGKEWVINYTWKEY- 500
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD-GDLCVGIRRAKK 216
H+L++GW F N +LV GD++VF+R+ D G+ +G+RR K
Sbjct: 501 -THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLK 543
>gi|383126516|gb|AFG43878.1| hypothetical protein 2_9190_01, partial [Pinus taeda]
Length = 153
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 60/88 (68%), Gaps = 11/88 (12%)
Query: 599 WNRSFQVTESGLDTG-----------HCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF 647
W + QV+ L+ G HCK FLESEDVGRTLDLS+ SSYEEL+ +LA MF
Sbjct: 66 WFKDRQVSLQTLENGSGGKTSEDGVVHCKAFLESEDVGRTLDLSLFSSYEELHNKLAKMF 125
Query: 648 GIERSDMLSHVLYQDASGAIKRTGDEPF 675
GIE SD+ + VLY+DA+G + TG++P+
Sbjct: 126 GIEDSDLSNRVLYKDAAGVGRHTGEQPY 153
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 151/396 (38%), Gaps = 102/396 (25%)
Query: 8 IDPQLWHACAGSMVQI-PPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIF---CRVSS 63
ID +WHACA + P + + V+Y P GH E SR+P I C V+
Sbjct: 19 IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPAL-LLSRLPDPIHPVPCTVAD 77
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
L D+E+ E YA I L+P D+ + V + E F K L+ +D
Sbjct: 78 LVLDVDAESGEAYATISLLP------GSHDDTTARRQVPAHGEPGF-RFFEKQLSPADVT 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL----- 178
+ +P AE + P LD A + +D+ G+ ++F HI+ R++L
Sbjct: 131 SNA-LVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGV 188
Query: 179 --TTGWSTFVNQKKLVAGDSIVFLR------AQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GW FV K+L D++VF+R DG+L VG+RRA + GG + P
Sbjct: 189 NDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGV--- 245
Query: 231 SNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLE 290
E+NK V+
Sbjct: 246 ---------------------EDNK--------------------------------VVS 252
Query: 291 AVALAASG-KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISW 349
V LA G PFEV YYPR T EF V G F + + +
Sbjct: 253 EVWLAMQGVTPFEVTYYPREGTFEFVVSRDE---------YIGFSFSPFYPFVPGTTVHL 303
Query: 350 FMGTISSVQVADPISWPN------SPWRLLQVTWDE 379
M + +Q+A IS PWR+L+V WD+
Sbjct: 304 RM---NPLQIAQSISGTVRTFDHLRPWRMLEVDWDQ 336
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 113/301 (37%), Gaps = 93/301 (30%)
Query: 113 FAKTLTQSDANNGGG-----FSVPR-YCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
F K L+ SDA GG F +P+ AE + PR + + ++ G W+F
Sbjct: 436 FDKKLSPSDAAANGGGSGALFVIPKPSAAEHVLPR--------IPDLRVTNLQGGRWEFG 487
Query: 167 HIYRG--TPRR---HLLTTGWSTFVNQKKLVAGDSIVFLRAQD-GDLCVGIRRAKKGIGG 220
H + T RR H L GWS FV K+L GD+++F+R + G+ VG
Sbjct: 488 HTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVG---------- 537
Query: 221 GNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNG 280
V P GG + ++
Sbjct: 538 ----------------VRRKPHGGMPVGIPDKH--------------------------- 554
Query: 281 GRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFE 340
V +A A+S +PF V Y P T EF V+ V+ + + G R ++
Sbjct: 555 -------VADAWLDASSAQPFRVTYCPWQGTAEFVVRREEVEGSPPL--APGTRVRLLMN 605
Query: 341 TEDSSRISW--FMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNV--KRVSPWLVEL 396
+D+ R S GT+ V S WR+L+V WD L +RV+ W V+
Sbjct: 606 PDDARRRSQPPVYGTVRDVHC-------RSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQP 658
Query: 397 V 397
V
Sbjct: 659 V 659
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 151/396 (38%), Gaps = 102/396 (25%)
Query: 8 IDPQLWHACAGSMVQI-PPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIF---CRVSS 63
ID +WHACA + P + + V+Y P GH E SR+P I C V+
Sbjct: 19 IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPAL-LLSRLPDPIHPVPCTVAD 77
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
L D+E+ E YA I L+P D+ + V + E F K L+ +D
Sbjct: 78 LVLDVDAESGEAYATISLLP------GSHDDTTARRQVPAHGEPGF-RFFEKQLSPADVT 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLL----- 178
+ +P AE + P LD A + +D+ G+ ++F HI+ R++L
Sbjct: 131 SNA-LVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLGDLGV 188
Query: 179 --TTGWSTFVNQKKLVAGDSIVFLR------AQDGDLCVGIRRAKKGIGGGNEYPSSGWN 230
GW FV K+L D++VF+R DG+L VG+RRA + GG + P
Sbjct: 189 NDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPGV--- 245
Query: 231 SNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLE 290
E+NK V+
Sbjct: 246 ---------------------EDNK--------------------------------VVS 252
Query: 291 AVALAASG-KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISW 349
V LA G PFEV YYPR T EF V G F + + +
Sbjct: 253 EVWLAMQGVTPFEVTYYPREGTFEFVVSRDE---------YIGFSFSPFYPFVPGTTVHL 303
Query: 350 FMGTISSVQVADPISWPN------SPWRLLQVTWDE 379
M + +Q+A IS PWR+L+V WD+
Sbjct: 304 RM---NPLQIAQSISGTVRTFDHLRPWRMLEVDWDQ 336
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 130/344 (37%), Gaps = 97/344 (28%)
Query: 70 SETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGG-- 127
S +D+ YA I L P + + + VG E F K L+ SDA GG
Sbjct: 421 SASDDSYAMISLFPGDCY-VTHRPLPAARDPVGGQREF---CFFDKKLSPSDAAANGGGS 476
Query: 128 ---FSVPR-YCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG--TPRR---HLL 178
F +P+ AE + PR + + ++ G W+F H + T RR H L
Sbjct: 477 GALFVIPKPSAAEHVLPR--------IPDLRVTNLQGGRWEFGHTWSDADTDRRSSSHTL 528
Query: 179 TTGWSTFVNQKKLVAGDSIVFLRAQDG-DLCVGIRRAKKGIGGGNEYPSSGWNSNNGSCV 237
GWS FV K+L GD+++F+R + G + VG+RR
Sbjct: 529 AAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR------------------------ 564
Query: 238 TGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRVKPEMVLEAVALAAS 297
P GG + ++ V +A A+S
Sbjct: 565 --KPHGGMPVGIPDKH----------------------------------VADAWLDASS 588
Query: 298 GKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISW--FMGTIS 355
+PF V Y P T EF V+ V+ + + G R ++ +D+ R S GT+
Sbjct: 589 AQPFRVTYCPWQGTAEFVVRREEVEGSPPL--APGTRVRLLMNPDDARRRSQPPVYGTVR 646
Query: 356 SVQVADPISWPNSPWRLLQVTWDEPDLLQNV--KRVSPWLVELV 397
V S WR+L+V WD L +RV+ W V+ V
Sbjct: 647 DVHC-------RSEWRMLEVDWDRDSPLAPTMNRRVNSWQVQPV 683
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEH---SLGSVNFPSSSR---IPPLIFCRVSSL 64
+LW CAG +V +P V+YFPQGH E S V+ + +PP I C V ++
Sbjct: 47 ELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNV 106
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
A+ +TDEVYA+I L+P+ E+ D +S + + + K SF+K LT SD +
Sbjct: 107 SLQAEKDTDEVYAQITLIPV-GTEV---DEPMSPDPSPPELQRPKVHSFSKVLTASDTST 162
Query: 125 GGGFSVPRYCAETIFPRLDYTADP 148
GGFSV R A P L + +P
Sbjct: 163 HGGFSVLRKHATECLPPLVHWDEP 186
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%)
Query: 560 LGKSSSDGHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFL 619
+ K + D HSD S+ S + E++ + S E Q +S KV +
Sbjct: 339 ISKPTMDSHSD---PKSEISKVSEEKKQEPAEGSPKEV------QSKQSSSTRSRTKVQM 389
Query: 620 ESEDVGRTLDLSVLSSYEELYRRLAIMFGIE---RSDMLSHVLYQDASGAIKRTGDEPFS 676
+ VGR +DL+ L Y EL + +F I+ RS +++ D G + GD+P+
Sbjct: 390 QGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVFTDDEGDMMLVGDDPWP 449
Query: 677 DFMKSAKRLTI 687
+F KR+ I
Sbjct: 450 EFCNMVKRIFI 460
>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
Length = 139
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
+K ++ +LWHACAG +V +PP+ S V YFPQGH+E S N P+ +PP +
Sbjct: 19 KKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLI 78
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPAS-FAKTL 117
C++ +L AD ETDEVYA++ L P+ E ++ L S++P + F KTL
Sbjct: 79 CQLHNLTMHADVETDEVYAQMTLQPLSPQ----EQKDVCLLPAELGIPSKQPTNYFCKTL 134
Query: 118 TQSD 121
T SD
Sbjct: 135 TASD 138
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 82/169 (48%), Gaps = 13/169 (7%)
Query: 301 FEVVYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQV 359
F + Y PRAS EF + A VKA GMRF+M FETE+SS + +MGTI+ +
Sbjct: 55 FTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESS-VRRYMGTITGISD 113
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQ 419
D + WPNS WR ++V WDE RVS W +E ++ P + SPF P R K P
Sbjct: 114 LDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPT-YTSPF-PLRLKRPWPT 171
Query: 420 QLDFPFDGQFTMPLFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFGISS 468
L L G ++ L L D T+ G Q G++S
Sbjct: 172 GLP---------SLHGGKDDDLANSLMWLRDTTNPGFQSLNFGGLGMNS 211
>gi|62865745|gb|AAY17065.1| m-160-2_1 [Polytrichum juniperinum]
Length = 316
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLYQDASGAIKRTGDEP 674
CKVF + E+VGRTLD+S +SYEELY RL +FG+ + +Y+DA G+ G+EP
Sbjct: 234 CKVFRDGEEVGRTLDMSSFTSYEELYSRLETIFGVSQLHFQDRAVYRDAQGSTMHVGNEP 293
Query: 675 FSDFMKSAKRLTIL 688
+ FM++ +RLTIL
Sbjct: 294 YRSFMQTVRRLTIL 307
>gi|168061514|ref|XP_001782733.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665766|gb|EDQ52439.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 318
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 60/105 (57%), Gaps = 15/105 (14%)
Query: 584 EQRISIEKSSSSEFFWNRSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRL 643
EQR+ EK S N + Q HCKVF E ++VGRTLDL+ SYEE+Y RL
Sbjct: 228 EQRLEKEKGS------NEALQ---------HCKVFREGDEVGRTLDLANFKSYEEVYDRL 272
Query: 644 AIMFGIERSDMLSHVLYQDASGAIKRTGDEPFSDFMKSAKRLTIL 688
A MF + + + V+YQD G G EP+ +F+ + +RLTIL
Sbjct: 273 AGMFSVPAASFKNRVVYQDGEGCTLPVGAEPYGNFVAAVRRLTIL 317
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 72/139 (51%), Gaps = 20/139 (14%)
Query: 4 VEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRI-----PPLIF 58
V+ ++ + W ACAG +V + + V+ FPQGH E S N + RI PP I
Sbjct: 24 VKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQELNQRIPMFNLPPKIL 83
Query: 59 CRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPA-----SF 113
CRV +++ LA+ +TDEVYA+I L+P E D + DS E+P SF
Sbjct: 84 CRVFNIQLLAEQDTDEVYAQITLMP----EAD------QTEPISPDSCPEEPPKPDVHSF 133
Query: 114 AKTLTQSDANNGGGFSVPR 132
K LT SD + G FSV R
Sbjct: 134 CKVLTASDTSTHGEFSVLR 152
>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
Length = 407
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 8 IDPQLWHACAG-SMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS------SSRIPPLIFCR 60
+D +W ACA + ++P + S VFYF GHA FP+ + P + C
Sbjct: 16 VDRDMWLACAAPNSGRLPAVGSVVFYFVDGHAAQF---CQFPAPLLEQLAVPGPRVFLCT 72
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V++++ AD+ T+E YA+I L P+ +++ + + + ++ F KTL S
Sbjct: 73 VAAVRLRADALTNEAYAEITLDPVADHDVP-RLAPAPAPAPAAAAGGQQLRYFVKTLMIS 131
Query: 121 DANNGGGFSVPRYCAETIFPRL-DYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
D + FS P A+ +FP L D A VQ ++ KD+HG F + +G +R L
Sbjct: 132 DFDFRIRFSAPMADAKGVFPPLVDAKA---VQPLLVKDLHGSPMTFDYGRKG--KRVTLA 186
Query: 180 TGWSTFVNQKKLVAGDSIVFL-----RAQDGDLCVGIRRAK 215
W F + V GDS++F+ DG+L VG+RR +
Sbjct: 187 KVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQR 227
>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
Length = 283
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 38/167 (22%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+K+I+ LW C G ++ +P + S V YFPQG+ E + S + IP +S L
Sbjct: 10 KKAINQALWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQKEADFDIP------ISHL 63
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
AD E DEV+A++ L P F + + + + SF++TLT
Sbjct: 64 H--ADQENDEVFAQMTLQPFSQTADPFLLPDFGIQT------KQTIVSFSRTLT------ 109
Query: 125 GGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
D+T PP Q +VA+D+H W+FRHIYRG
Sbjct: 110 ------------------DFTQTPPAQELVARDLHNIEWRFRHIYRG 138
>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
Length = 407
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 108/221 (48%), Gaps = 22/221 (9%)
Query: 8 IDPQLWHACAG-SMVQIPPLNSTVFYFPQGHAEHSLGSVNFPS------SSRIPPLIFCR 60
+D +W ACA + ++P + S VFYF GHA FP+ + P + C
Sbjct: 16 VDRAMWLACAAPNSGRLPAVGSVVFYFVDGHAAQF---CQFPAPLLEQLAVPGPRVFLCT 72
Query: 61 VSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQS 120
V++++ AD+ T+E YA+I L P+ +++ + + + ++ F KTL S
Sbjct: 73 VAAVRLRADALTNEAYAEITLDPVADHDVP-RLAPAPAPAPAAAAGGQQLRYFVKTLMIS 131
Query: 121 DANNGGGFSVPRYCAETIFPRL-DYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLT 179
D + FS P A+ +FP L D A VQ ++ KD+HG F + +G +R L
Sbjct: 132 DFDFRIRFSAPMADAKGVFPPLVDAKA---VQPLLVKDLHGSPMTFDYGRKG--KRVTLA 186
Query: 180 TGWSTFVNQKKLVAGDSIVFL-----RAQDGDLCVGIRRAK 215
W F + V GDS++F+ DG+L VG+RR +
Sbjct: 187 KVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQR 227
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 2/113 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI +
Sbjct: 2 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGCENL 60
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARK 413
DP+ WP+S WR L+V WDEP + RVSPW +E S+ PV L S A++
Sbjct: 61 DPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKR 112
Score = 43.5 bits (101), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 601 RSFQVTESGLDTGHC-KVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLS--- 656
+ Q G T C KV + +GR++DLS + Y EL L MF E +++S
Sbjct: 416 KDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKMFDFE-GELVSGSQ 474
Query: 657 --HVLYQDASGAIKRTGDEPFSDFMKSAKRLTI 687
++Y D G + GD+P+ +F +++ I
Sbjct: 475 NWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYI 507
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 304 VYYPRASTPEFCVK-ASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADP 362
VY PR S EF V A KA GMRF+M FETE+SS + +MGTI+ + DP
Sbjct: 1 VYNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESS-VRRYMGTITGISDLDP 59
Query: 363 ISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
+ WPNS WR LQV WDE RVS W +E V+ P PF ++ L
Sbjct: 60 VRWPNSQWRNLQVGWDESGAGDKQNRVSIWEIETVAT-PFFICPPFFRLKRPL 111
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 150/403 (37%), Gaps = 109/403 (27%)
Query: 8 IDPQLWHACAGSMVQI-PPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIF---CRVSS 63
ID +WHACA + P + + V+Y P GH E SR+P I C V+
Sbjct: 19 IDRDVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPAL-LLSRLPDPIHPVPCTVAD 77
Query: 64 LKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDAN 123
L D+E+ E YA I L+P D+ + V + E F K L+ +D
Sbjct: 78 LVLDVDAESGEAYATISLLP------GSHDDTTARRQVPAHGEPGF-RFFEKQLSPADVT 130
Query: 124 NGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPR-----RHLL 178
+ +P AE + P LD A + +D+ G+ ++F HI+ R++L
Sbjct: 131 SNA-LVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRCRYML 188
Query: 179 -------TTGWSTFVNQKKLVAGDSIVFLR--------AQDGDLCVGIRRAKKGIGGGNE 223
GW FV K+L D++VF+R DG+L VG+RRA + GG +
Sbjct: 189 GDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARGGHHP 248
Query: 224 YPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSSGNTRGNGGRV 283
P E+NK
Sbjct: 249 RPGV------------------------EDNK---------------------------- 256
Query: 284 KPEMVLEAVALAASG-KPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETE 342
V+ V L G PFEV YYPR T EF V G F +
Sbjct: 257 ----VVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDE---------YIGFSFSPFYPFV 303
Query: 343 DSSRISWFMGTISSVQVADPISWPN------SPWRLLQVTWDE 379
+ + M + +Q+A IS PWR+L+V WD+
Sbjct: 304 PGTTVHLRM---NPLQIAQSISGTVRTFDHLRPWRMLEVDWDQ 343
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 113 FAKTLTQSDANNGGG-----FSVPR-YCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
F K L+ SDA GG F +P+ AE + PR + + ++ G W+F
Sbjct: 443 FDKKLSPSDAAANGGGSGALFVIPKPSAAEHVLPR--------IPDLRVTNLQGGRWEFG 494
Query: 167 HIYRG--TPRR---HLLTTGWSTFVNQKKLVAGDSIVFLRAQD-GDLCVGIRRAKKG--- 217
H + T RR H L GWS FV K+L GD+++F+R + G+ VG+RR G
Sbjct: 495 HTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPIVGVRRKPHGGML 554
Query: 218 IGGGNEYPSSGWNSNNGSC 236
+G +++ + W G+
Sbjct: 555 VGIPDKHVADAWLDAVGTA 573
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 82.0 bits (201), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 12/146 (8%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFC 59
E + +LW+ CAG +V +P + V+YFPQGH E S N + +P I C
Sbjct: 36 EDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILC 95
Query: 60 RVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSES---EKPASFAKT 116
V +++ A+ + DEVYA++ L+P E E+N S S + + SF KT
Sbjct: 96 EVMNVELKAEPDNDEVYAQLTLLP----ESKPEENGSSEEMPASPPAALARPRVHSFCKT 151
Query: 117 LTQSDANNGGGFSVPRYCAETIFPRL 142
LT SD + GGFSV R A+ P L
Sbjct: 152 LTASDTSTHGGFSVLRRHADECLPPL 177
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD +A+ P QT+ +DV G+ W+FR+ Y +
Sbjct: 165 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNS 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAK 215
+ ++LT GWS FV +KKL AGD + F R +L + RR +
Sbjct: 224 SQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRRKQ 266
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 107 SEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKF 165
S++P++ F KTL SD + GGFSVPR AE +FP LD++ PP Q ++A+D+H WKF
Sbjct: 24 SKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKF 83
Query: 166 RHIYR 170
RHI+R
Sbjct: 84 RHIFR 88
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR S EF + +++ ++ GMRF+M FE E++ F GTI +
Sbjct: 75 FTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR-FTGTIVGSENL 133
Query: 361 DPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPV 402
D + WP S WR L+V WDEP + RVSPW +E S+ PV
Sbjct: 134 DQL-WPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPV 174
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 567 GHSDKVKASSDGSGSTHEQRISIEKSSSSEFFWNRSFQVTESGLDTGHC-KVFLESEDVG 625
H D + S + T E SI+++ +S ++ Q G T C KV + +G
Sbjct: 451 AHIDCIPELSVSTAGTTENEKSIQQAPNS----SKDVQSKSHGASTRSCTKVHKQGVALG 506
Query: 626 RTLDLSVLSSYEELYRRLAIMFGIERSDMLS----HVLYQDASGAIKRTGDEPFSDFMKS 681
R++DLS Y+EL L MF M S ++Y D G + GD+P+ +F
Sbjct: 507 RSVDLSKFGDYDELTAELDRMFEFGGELMSSNRDWQIVYTDPEGDMMLVGDDPWEEFCSI 566
Query: 682 AKRLTI 687
+++ I
Sbjct: 567 VRKIFI 572
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD +A+ P QT+ +DV G+ W+FR+ Y +
Sbjct: 131 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHWRFRYSYWNS 189
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCV 209
+ ++LT GWS FV +KKL AGD + F R ++ +L +
Sbjct: 190 SQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD + P QT+ +DV G+ W+FR+ Y +
Sbjct: 199 FEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYSYWNS 257
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
+ ++ T GWS F+ KKL AGD++ F R + +L + RR
Sbjct: 258 SQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRR 298
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Query: 81 LVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFP 140
+VP P NE D S+ ++ F K +T SD +P+ AE FP
Sbjct: 46 MVPNPPNESD------DPPSLPPKPTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP 99
Query: 141 RLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 200
LD + P QT+ +DV G+ W+FR+ Y + + ++ T WS F+ KKL AGD++ F
Sbjct: 100 -LDLALNVPCQTLSFEDVSGKHWRFRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFE 158
Query: 201 RAQDGDLCVGIRR 213
R + +L + RR
Sbjct: 159 RGPNQELYIDFRR 171
>gi|357489187|ref|XP_003614881.1| Auxin response factor [Medicago truncatula]
gi|355516216|gb|AES97839.1| Auxin response factor [Medicago truncatula]
Length = 356
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 47 FPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSE 106
PS + +P C +S++ D+ TDEV+AK+ L P+ A E + D +
Sbjct: 1 MPSCNILP----CIISAVNLFVDALTDEVFAKLLLTPLTAQE---PPPPPPVVPGQEDDD 53
Query: 107 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
S+ KTLT ++ + F++ CA+ IFP+LD Q ++ D+ + W
Sbjct: 54 GNNLVSYFKTLTTTETKSV--FNISHECADLIFPKLDLEKS---QIIIVTDLKSQEWGCT 108
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
++ + L TGWS F +KKLVA DS+VF++
Sbjct: 109 YV-----KNSRLRTGWSHFRKEKKLVAKDSVVFMK 138
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 82/189 (43%), Gaps = 26/189 (13%)
Query: 288 VLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRI 347
VL AV A FEVVYYP + V AM++ W GMR K+ + ++SS
Sbjct: 143 VLNAVEFADKNMEFEVVYYP-----------TVVDDAMKIGWESGMRVKLTLKKDESSNS 191
Query: 348 SWFM---GTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIH 404
+ GTIS+V + PN WR+L+ D +LQN +PWLVE + + H
Sbjct: 192 KTYYHPKGTISTV-FNYSCNVPN--WRILE---DGSKILQNTNIFNPWLVEACNMTALDH 245
Query: 405 LSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSPLCCL------SDNTSAGIQG 458
SP + P F P P+S + L SD SAG+QG
Sbjct: 246 AQYSSPQQIPYSSPPITVPQLPPPPPASPFIAMPELPNSTMGSLNQTWLDSDTFSAGMQG 305
Query: 459 ARHAQFGIS 467
ARH +S
Sbjct: 306 ARHDHLSVS 314
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 63/109 (57%), Gaps = 23/109 (21%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIW-KFRHIYRG 171
F KTLT SD + GGFSVPR AE FP L++ W +F+ R
Sbjct: 123 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRFKECKRT 164
Query: 172 TPRRHLL----TTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+ R +++ TTG S FVN+KKLV+ D+++FLR +G+L +G+RRA +
Sbjct: 165 SMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRAAQ 213
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
+L AVA + + F + + PR EF V ++ H+ G RFK+ E ED++
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV-SNMPVIH- 404
S+ G I + DPI WP S W+ L + WD + RVSPW +E V S++ V H
Sbjct: 61 RSF--GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHR 118
Query: 405 LSPFSPARKKLRL-PQQLDFP-FDG 427
LS R KL P LD P DG
Sbjct: 119 LSSSVSKRTKLCFPPSDLDTPILDG 143
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 54 PPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASF 113
P + C V++++ AD+ T+E YA I L P+ +++ + + + ++ F
Sbjct: 26 PRVFLCTVAAVRLRADALTNEAYADITLDPVADHDVP-RLLPAPAPAAAAGGQQQQLRYF 84
Query: 114 AKTLTQSDANNGGGFSVPRYCAETIFPRL-DYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
KTL SDA F+VP A+ +FP L D A VQ ++ KD+ G F + G
Sbjct: 85 VKTLMSSDAEYRDRFAVPMDVAKDVFPPLVDAKA---VQPLIVKDLQGSPMTFDYGRNGN 141
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD-LCVGIRRAK 215
R L W F + V GDS++F+R +D D L VG+RR +
Sbjct: 142 --RVTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRRQR 183
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAK 115
+ C+V++++ D+ +E++A + L+P+ A + + + S SF K
Sbjct: 347 VFLCKVTAVRL--DATRNELFATMSLIPV-ARDQAIQPQAPADPGPSSPQVQTTLVSFVK 403
Query: 116 TLTQSDA-NNGGGFSVP-RYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTP 173
LT +DA N F VP R A + P+L P+ KD+HG+ W + ++
Sbjct: 404 PLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVPLYI---KDMHGKEWVINYTWKEY- 459
Query: 174 RRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD-GDLCVGIRRAKK 216
H+L++GW F N +LV GD++VF+R+ D G+ +G+RR K
Sbjct: 460 -THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLK 502
>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 123
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 13/93 (13%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN------FPSSSRIPPLIF 58
++ ++ +LWHACAG +V +P + S V YFPQGH+E S N P+ +PP +
Sbjct: 21 QRCLNSELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLI 80
Query: 59 CRVSSLKFLADSETDEVYAKIK---LVPIPANE 88
C++ + AD ETDEVYA++ L P+P +
Sbjct: 81 CQLHN----ADVETDEVYAQMTLQLLSPVPMTQ 109
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 288 VLEAVALAASGKP-FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
L V A S K F++ Y PR S EF V ++ + G RFKM +E+ED++
Sbjct: 46 TLANVTHAVSTKSMFQIFYNPRLSQSEFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAE 105
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLS 406
+ G I+ ADP W S W+ L V WD+ + R+SPW +EL S HL+
Sbjct: 106 RR-YTGIITGTVDADP-RWRGSKWKCLLVRWDDDGEFRRPNRLSPWEIELTSAASGSHLA 163
Query: 407 PFSPARKKLRLPQQLDFPFDGQFTMPLFSGNP 438
+ R K LP + ++T+P G P
Sbjct: 164 APTSKRMKPYLPHA-----NPEYTVPYGGGRP 190
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 287 MVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWL-CGMRFKMAFETEDSS 345
M ++A+ +AA+ VVYYP A EF V S A+ V L G+RF M FET+
Sbjct: 47 MPIDALVVAANRTLLPVVYYPGACVSEFVVPLSKYNNALFVSQLSIGLRFDMMFETKAFD 106
Query: 346 RISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPW 392
MGTI + DP+ WP+S W+ ++V WD+PD RV W
Sbjct: 107 TCC-NMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNRVCSW 152
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 40/184 (21%)
Query: 1 MKEVEKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVN-----FPSSSRIPP 55
+ E ++ QL CAG + P + E + S+N IP
Sbjct: 16 IDETNNYLNGQLLKLCAGPLFDTPKV-----------GEKLVTSINDELCQLKPIFDIPS 64
Query: 56 LIFCRVSSLKFLADSETDEVYAKIKL--------VPIPANEIDFEDNNLSLNSVGSDSES 107
I C V S+ ++ T+++YA++ L +PIP NE + ++ N
Sbjct: 65 KICCNVFSINLKVENNTNDIYAEVALLPDTSDVEIPIPKNENNIQNINY----------- 113
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
F K L+ SD GGF + + A P LD + P Q ++AKD+HG W F+H
Sbjct: 114 -----FTKVLSASDTCKTGGFVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKH 168
Query: 168 IYRG 171
RG
Sbjct: 169 TLRG 172
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVA 360
F V Y PR+S +F V + + G +F M FE +D + + + GTI V V
Sbjct: 219 FVVFYKPRSS--QFLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNE-TRYNGTI--VGVG 273
Query: 361 D-PISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKL 415
D W +S WR L+V WD + +VSPW +E+++ I S + ++++
Sbjct: 274 DFSTHWKDSEWRSLKVQWDGTATIPRPDKVSPWEIEMLTQSSNISKSDYLKNKRQI 329
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD +A+ + +D+ G++W+FR+ Y +
Sbjct: 158 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWNS 216
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
+ ++LT GWS FV +KKL AGD + F R +L + RR
Sbjct: 217 SQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 257
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD +A+ + +D+ G++W+FR+ Y +
Sbjct: 159 FDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYWNS 217
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRR 213
+ ++LT GWS FV +KKL AGD + F R +L + RR
Sbjct: 218 SQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRR 258
>gi|224096698|ref|XP_002334680.1| predicted protein [Populus trichocarpa]
gi|222874116|gb|EEF11247.1| predicted protein [Populus trichocarpa]
Length = 102
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 46/66 (69%)
Query: 30 VFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEI 89
VFYF QGH +L ++ + RI LI CRV++++FLAD +TDEVYAKI +VP+PA
Sbjct: 19 VFYFLQGHMPSTLNPLSTSLAQRIHSLILCRVATVRFLADPDTDEVYAKIGVVPLPAPMR 78
Query: 90 DFEDNN 95
DF N+
Sbjct: 79 DFVVND 84
>gi|297814780|ref|XP_002875273.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
lyrata]
gi|297321111|gb|EFH51532.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P++ AE FP + V+ ++ +DV+G++W+FR+ Y
Sbjct: 180 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGILLNFEDVNGKVWRFRYSYW 239
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA--QDGDLCVGIRRAKKGIGGGNE 223
+ + ++LT GWS FV +K+L AGD I F R+ QD L +G ++K G G E
Sbjct: 240 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNGQDQKLFIGW-KSKFGSGSDQE 293
>gi|21593532|gb|AAM65499.1| AP2 domain transcription factor [Arabidopsis thaliana]
Length = 333
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P++ AE FP + V+ ++ +DV+G++W+FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ + ++LT GWS FV +K+L AGD I F R+ D D
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQD 278
>gi|15230871|ref|NP_189201.1| AP2/ERF and B3 domain-containing transcription factor ARF14
[Arabidopsis thaliana]
gi|75273878|sp|Q9LS06.1|RAVL4_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
ARF14; AltName: Full=Protein AUXIN RESPONSE FACTOR 14;
AltName: Full=RAV1-like ethylene-responsive
transcription factor ARF14
gi|7939559|dbj|BAA95760.1| RAV1 DNA-binding protein-like [Arabidopsis thaliana]
gi|20152524|emb|CAD29641.1| putative auxin response factor 14 [Arabidopsis thaliana]
gi|110738703|dbj|BAF01276.1| AP2 domain transcription factor [Arabidopsis thaliana]
gi|332643541|gb|AEE77062.1| AP2/ERF and B3 domain-containing transcription factor ARF14
[Arabidopsis thaliana]
Length = 333
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P++ AE FP + V+ ++ +DV+G++W+FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ + ++LT GWS FV +K+L AGD I F R+ D D
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQD 278
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 95/219 (43%), Gaps = 45/219 (20%)
Query: 333 MRFKMAFETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPW 392
MRF+M FETE+SS + +MGTI+ + DP+ WPNS WR ++V WDE + RVS W
Sbjct: 1 MRFRMLFETEESS-VRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLW 59
Query: 393 LVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPLFSGNPLGPSSP-LCCLSDN 451
+E ++ P+ P+ LRL + P P SP L D
Sbjct: 60 EIEPLTTFPMY------PSLFPLRLKR------------------PWHPGSPSLLDSRDE 95
Query: 452 TSAGIQGAR--HAQFGISSSDFHVNNKLQSGLFLSSLQRFTPNSRDFDGILTSHTNSSEN 509
S G+ R + G+ S +F N + QR P D ++
Sbjct: 96 ASNGLMWLRGGSGEPGLPSLNFQAN------MLPWMQQRLDPTMLGND--------HNQR 141
Query: 510 LSCLLTMGNSNQNLEKSENIKKHQFLLFGQPIRTEQQIS 548
+L G QNL + +++ QF+ QP + QQ S
Sbjct: 142 YQAMLAAG--MQNLGSGDPLRQ-QFMQLQQPFQYLQQSS 177
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 615 CKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSH-----VLYQDASGAIKR 669
KV+ +S VGR+LD+S SSY EL LA MFGIE H +++ D +
Sbjct: 427 VKVY-KSGSVGRSLDISRFSSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLL 485
Query: 670 TGDEPFSDFMKSAKRLTIL 688
GD+P+ F+ + + IL
Sbjct: 486 LGDDPWELFVNNVWYIKIL 504
>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 45 VNFPSSSRIPPLIFCRVSSLKFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSD 104
P+ +PP + C++ ++ AD+ TDEVYA++ L P+ E+ +
Sbjct: 50 AQIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQPL-----SPEEQKEPFLPIELG 104
Query: 105 SESEKPAS-FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPP 149
S++P + F KTLT S+ + GGFS+PR AE +FP LD++ PP
Sbjct: 105 GASKQPTNYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQPP 150
>gi|449445748|ref|XP_004140634.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
[Cucumis sativus]
gi|449515921|ref|XP_004164996.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
[Cucumis sativus]
Length = 354
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 93 DNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT 152
D +L + S G E+ F K +T SD +P+ AE FP LD + +
Sbjct: 74 DLSLRMESNGFADVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLI 132
Query: 153 VVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ +D HG+ W+FR+ Y + + +++T GWS FV +KKL AGD + F RA
Sbjct: 133 LNFEDRHGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRA 182
>gi|242062916|ref|XP_002452747.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
gi|241932578|gb|EES05723.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
Length = 434
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 98 EKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRY 156
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
Y + + +++T GWS FV +K+LVAGD++ F RA D
Sbjct: 157 SYWNSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAED 195
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDS 344
E++ AA+ F + + PRAS EF + S +KA GMRF+M FETE+S
Sbjct: 54 ELLAAVAHAAATNSRFTIFFNPRASPTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEES 113
Query: 345 SRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLL-----QNVKRVSPWLVELVSN 399
S + +MGTI+ V ADP+ WP+S WR ++V D N K VS V LVS
Sbjct: 114 S-VRRYMGTITEVSDADPVRWPSSYWRSVKVAMAPNDKYLCTGGSNQKVVSCLFVLLVSY 172
Query: 400 MPVI 403
+ +
Sbjct: 173 VAYV 176
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Query: 286 EMVLEAVALAASGKPFEVVYYPRASTPEFCVKASA-VKAAMRVHWLCGMRFKMAFETEDS 344
E++ AA+ F + + PRAS EF + S +KA GMRF+M FETE+S
Sbjct: 258 ELLAAVAHAAATNSRFTIFFNPRASPTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEES 317
Query: 345 SRISWFMGTISSVQVADPISWPNSPWR 371
S + +MGTI+ V ADP+ WP+S WR
Sbjct: 318 S-VRRYMGTITEVSDADPVRWPSSYWR 343
>gi|328870397|gb|EGG18771.1| bromodomain-containing protein [Dictyostelium fasciculatum]
Length = 1483
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 304 VYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPI 363
V+Y + P++ V AS VK ++ W GM+FKM + E+ W+ G I S+ +DP
Sbjct: 1013 VFYHVSDIPDYLVLASKVKRSLETRWAPGMKFKMYYPDEE----KWYNGRIKSIAPSDP- 1067
Query: 364 SWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSN 399
++P+S W + V W + N RVSPW +EL+++
Sbjct: 1068 NYPDSLWERILVCWSQDG---NDDRVSPWEIELLTD 1100
>gi|308080706|ref|NP_001183918.1| uncharacterized protein LOC100502511 [Zea mays]
gi|238015438|gb|ACR38754.1| unknown [Zea mays]
gi|413938267|gb|AFW72818.1| hypothetical protein ZEAMMB73_941356 [Zea mays]
Length = 422
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 96 EKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRY 154
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
Y + + +++T GWS FV +K+LVAGD++ F RA D
Sbjct: 155 SYWNSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAED 193
>gi|356571279|ref|XP_003553806.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 413
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD +++ + +D +G++W+FR+
Sbjct: 85 EKENMFEKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKVWRFRY 143
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDL 207
Y + + +++T GWS FV +KKL AGD + F R GDL
Sbjct: 144 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGL-GDL 182
>gi|358347636|ref|XP_003637862.1| Maturase K [Medicago truncatula]
gi|355503797|gb|AES85000.1| Maturase K [Medicago truncatula]
Length = 624
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 105 SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWK 164
S EK F K +T SD +P+ AE FP LD T++ + +D +G++W+
Sbjct: 164 STHEKEHMFDKAVTPSDVGKLNRLVIPKQHAEKYFP-LDSTSNEKGLLLNFEDRNGKLWR 222
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
FR+ Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 223 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 260
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ Q + +D G++W+FR+
Sbjct: 89 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRY 147
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 148 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 181
>gi|356560217|ref|XP_003548390.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 420
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 1/101 (0%)
Query: 102 GSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
G+ +EK F K +T SD +P+ AE FP LD +A+ + +D +G+
Sbjct: 22 GAQQPAEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGK 80
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+W+FR+ Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 81 LWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 121
>gi|225423895|ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Vitis vinifera]
Length = 358
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
Query: 61 VSSLKFLADSETDEV-------YAKIKLVPIPA-----NEIDFEDNNLSLNSVGSDSESE 108
V++ K L+++E D++ ++K ++V + +E++ N L++ G S +E
Sbjct: 113 VTNFKPLSETEEDDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAE 172
Query: 109 --------------KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVV 154
+ F KT+T SD +P+ AE FP T V +
Sbjct: 173 GLMTPFGSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGTTSKGV-LLN 231
Query: 155 AKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+D+ G++W+FR+ Y + + ++LT GWS FV +K L AGD + F R+ GD
Sbjct: 232 FEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGD 283
>gi|147782990|emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
Length = 364
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 84/172 (48%), Gaps = 27/172 (15%)
Query: 61 VSSLKFLADSETDEV-------YAKIKLVPIPA-----NEIDFEDNNLSLNSVGSDSESE 108
V++ K L+++E D++ ++K ++V + +E++ N L++ G S +E
Sbjct: 113 VTNFKPLSETEEDDIEAAFLNSHSKAEIVDMLRKHTYNDELEQSKRNYGLDANGKRSRAE 172
Query: 109 --------------KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVV 154
+ F KT+T SD +P+ AE FP T V +
Sbjct: 173 GLMTPFGSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLQTGTTSKGV-LLN 231
Query: 155 AKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+D+ G++W+FR+ Y + + ++LT GWS FV +K L AGD + F R+ GD
Sbjct: 232 FEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGGD 283
>gi|383932346|gb|AFH57270.1| RAV [Gossypium hirsutum]
Length = 357
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP +A + +DV G++W+FR+ Y +
Sbjct: 193 FEKAVTPSDVGKLNRLVIPKQHAEKYFPLQSGSASSKGVLLNFEDVTGKVWRFRYSYWNS 252
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIR-RAKKGIGGGNEYP 225
+ ++L GWS FV +K L AGD + F R+ + + I +A+ G+G G E P
Sbjct: 253 SQSYVLIKGWSRFVKEKNLKAGDIVSFQRSTGTEKQLYIDWKARTGLGSGLENP 306
>gi|56966891|pdb|1WID|A Chain A, Solution Structure Of The B3 Dna-Binding Domain Of Rav1
Length = 130
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYR 170
A F K +T SD +P++ AE FP + +DV+G++W+FR+ Y
Sbjct: 12 ALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYW 71
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA--QDGDLCVGIR 212
+ + ++LT GWS FV +K L AGD + F R+ QD L +G +
Sbjct: 72 NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK 115
>gi|18407193|ref|NP_566089.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
thaliana]
gi|75100798|sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1;
AltName: Full=Protein NGATHA 1
gi|3522951|gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|20197317|gb|AAM15018.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|26451145|dbj|BAC42676.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|30793817|gb|AAP40361.1| putative RAV B3 domain DNA binding protein [Arabidopsis thaliana]
gi|330255671|gb|AEC10765.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
thaliana]
Length = 310
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 102 GSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
G+ +++ F K +T SD +P+ AE FP LD +++ + +D+ G+
Sbjct: 24 GAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGK 82
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-----AQDGDLCVGIRRAKK 216
W+FR+ Y + + +++T GWS FV KKL AGD + F R +D L + RR K
Sbjct: 83 SWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPK 142
Query: 217 -----GIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNS----- 266
G +P P +S + +++ G N +
Sbjct: 143 VPDHPHFAAGAMFPR----------FYSFPSTNYSLYNHQQQRHHHSGGGYNYHQIPREF 192
Query: 267 -YGSFNSSGNTRGN-GGRVKPEMVLEAVALAASGK 299
YG F S + R N V +V+E+V + G+
Sbjct: 193 GYGYFVRSVDQRNNPAAAVADPLVIESVPVMMHGR 227
>gi|297844230|ref|XP_002889996.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
lyrata]
gi|297335838|gb|EFH66255.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHI 168
A F K +T SD +P++ AE FP +++ V+ V+ +DV+G++W+FR+
Sbjct: 186 ALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLP--SSNVSVKGVLLNFEDVNGKVWRFRYS 243
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA--QDGDLCVG 210
Y + + ++LT GWS FV +K L AGD + F R+ QD L +G
Sbjct: 244 YWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>gi|15222217|ref|NP_172784.1| AP2/ERF and B3 domain-containing transcription factor RAV1
[Arabidopsis thaliana]
gi|25091118|sp|Q9ZWM9.1|RAV1_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
RAV1; AltName: Full=Ethylene-responsive transcription
factor RAV1; AltName: Full=Protein RELATED TO ABI3/VP1 1
gi|9958065|gb|AAG09554.1|AC011810_13 DNA binding protein RAV1 [Arabidopsis thaliana]
gi|3868857|dbj|BAA34250.1| RAV1 [Arabidopsis thaliana]
gi|17380762|gb|AAL36211.1| putative DNA-binding protein RAV1 [Arabidopsis thaliana]
gi|20259029|gb|AAM14230.1| putative DNA-binding protein RAV1 [Arabidopsis thaliana]
gi|332190870|gb|AEE28991.1| AP2/ERF and B3 domain-containing transcription factor RAV1
[Arabidopsis thaliana]
Length = 344
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 6/104 (5%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHI 168
A F K +T SD +P++ AE FP +++ V+ V+ +DV+G++W+FR+
Sbjct: 186 ALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLP--SSNVSVKGVLLNFEDVNGKVWRFRYS 243
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA--QDGDLCVG 210
Y + + ++LT GWS FV +K L AGD + F R+ QD L +G
Sbjct: 244 YWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>gi|297789622|ref|XP_002862757.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
lyrata]
gi|297308467|gb|EFH39015.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
lyrata]
Length = 312
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 101 VGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHG 160
G+ +E+ F K +T SD +P+ AE FP LD +++ + +D+ G
Sbjct: 25 AGTREVAEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTG 83
Query: 161 EIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-----AQDGDLCVGIRRAK 215
+ W+FR+ Y + + +++T GWS FV KKL AGD + F R +D L + RR
Sbjct: 84 KSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRP 143
Query: 216 K-----GIGGG------NEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNL 264
K G +PS+ +N N + GG++ +++ R
Sbjct: 144 KVPDHPHFAAGAMFPRFYSFPSTSYNLYNHQQQRHHHGGGYNY------HQIPRE----- 192
Query: 265 NSYGSFNSSGNTRGN-GGRVKPEMVLEAVALAASGK 299
YG F S + R N V +V+E+V + G+
Sbjct: 193 FGYGYFVRSVDQRNNPAAAVADPLVIESVPVMMHGR 228
>gi|255548087|ref|XP_002515100.1| hypothetical protein RCOM_1340820 [Ricinus communis]
gi|223545580|gb|EEF47084.1| hypothetical protein RCOM_1340820 [Ricinus communis]
Length = 450
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 2/109 (1%)
Query: 95 NLSLNSVGSDSES-EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTV 153
N S ++ G+ S S E+ F K +T SD +P+ AE FP LD +++ +
Sbjct: 106 NTSTSTAGASSGSIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLL 164
Query: 154 VAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+D +G++W+FR+ Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 165 NFEDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 213
>gi|297824777|ref|XP_002880271.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
lyrata]
gi|297326110|gb|EFH56530.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 29/216 (13%)
Query: 101 VGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHG 160
G+ +E+ F K +T SD +P+ AE FP LD +++ + +D+ G
Sbjct: 24 AGTREVAEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTG 82
Query: 161 EIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-----AQDGDLCVGIRRAK 215
+ W+FR+ Y + + +++T GWS FV KKL AGD + F R +D L + RR
Sbjct: 83 KSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRP 142
Query: 216 K-----GIGGG------NEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNL 264
K G +PS+ +N N + GG++ +++ R
Sbjct: 143 KVPDHPHFAAGAMFPRFYSFPSTSYNLYNHQQQRHHHGGGYNY------HQIPRE----- 191
Query: 265 NSYGSFNSSGNTRGN-GGRVKPEMVLEAVALAASGK 299
YG F S + R N V +V+E+V + G+
Sbjct: 192 FGYGYFVRSVDQRNNPAAAVADPLVIESVPVMMHGR 227
>gi|291197510|emb|CAZ68123.1| NGATHA1 [Arabidopsis halleri subsp. halleri]
Length = 313
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 93/216 (43%), Gaps = 29/216 (13%)
Query: 101 VGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHG 160
G+ +E+ F K +T SD +P+ AE FP LD +++ + +D+ G
Sbjct: 25 AGTRQVAEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTG 83
Query: 161 EIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-----AQDGDLCVGIRRAK 215
+ W+FR+ Y + + +++T GWS FV KKL AGD + F R +D L + RR
Sbjct: 84 KSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRP 143
Query: 216 K-----GIGGG------NEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNL 264
K G +PS+ +N N + GG++ E
Sbjct: 144 KVPDHPHFAAGAMFPRFYSFPSTSYNLYNHQQQRHHHGGGYNYHQIPRE----------- 192
Query: 265 NSYGSFNSSGNTRGN-GGRVKPEMVLEAVALAASGK 299
YG F S + R N V +V+E+V + G+
Sbjct: 193 FGYGYFVRSVDQRNNPAAAVADPLVIESVPVMMHGR 228
>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 186
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSR-----IPPLIFCRVSSLK 65
+LWHACA +V P + VFYFPQGH E S+N + ++ +PP + CRV +++
Sbjct: 21 ELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVINIE 80
Query: 66 FLADSETDEVYAKIKLV 82
A+++ D+VYA++ L+
Sbjct: 81 LKAEADIDKVYAQVILM 97
>gi|356522464|ref|XP_003529866.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Glycine
max]
Length = 421
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD +A+ + +D +G++W+FR+
Sbjct: 56 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRY 114
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 115 SYWNSSQSYVMTKGWSRFVKEKKLDAGDMVSFQRG 149
>gi|227060666|gb|ACP18971.1| NGATHA1 [Arabidopsis thaliana]
Length = 310
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 28/215 (13%)
Query: 102 GSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
G+ +++ F K +T SD +P+ AE FP LD +++ + +D+ G+
Sbjct: 24 GAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLTGK 82
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-----AQDGDLCVGIRRAKK 216
W+FR+ Y + + +++T GWS FV KKL AGD + F R +D L + RR K
Sbjct: 83 SWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPK 142
Query: 217 -----GIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNS----- 266
G +P P +S + +++ G N +
Sbjct: 143 VPDHPHFAAGAMFPR----------FYSFPSTNYSLYNHQQQRHHHGGGGYNYHQIPREF 192
Query: 267 -YGSFNSSGNTRGN-GGRVKPEMVLEAVALAASGK 299
YG F S + R N V +V+E+V + G+
Sbjct: 193 GYGYFVRSVDQRNNPAAAVADPLVIESVPVMMHGR 227
>gi|356504205|ref|XP_003520889.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 420
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 2/100 (2%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K T SD +P+ AE FP LD + + + +D +G++W+FR+
Sbjct: 83 EKEHMFEKVATPSDVGKLNRLVIPKQHAEKYFP-LDSSTNEKGLLLNFEDRNGKVWRFRY 141
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDL 207
Y + + +++T GWS FV +KKL AGD + F R GDL
Sbjct: 142 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGL-GDL 180
>gi|253560642|gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
Length = 362
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP T V + KDV G++W+FR+ Y +
Sbjct: 202 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSETTSKGV-LLNFKDVAGKVWRFRYSYWNS 260
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ ++LT GWS FV +K L AGD + F R+ D
Sbjct: 261 SQSYVLTKGWSRFVKEKSLKAGDIVSFYRSTGSD 294
>gi|164458456|gb|ABY57635.1| RAV2 [Solanum lycopersicum]
Length = 395
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 1/107 (0%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP + V + +D++G++W+FR+ Y +
Sbjct: 207 FEKVVTPSDVGKLNRLVIPKQHAEKHFPLQNGNNSKGV-LLNFEDLNGKVWRFRYSYWNS 265
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKGIG 219
+ ++LT GWS FV +K L AGD + F R+ GD + I K +G
Sbjct: 266 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYIDFKAKNVG 312
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 82 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRY 140
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 141 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 174
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 86 ANEIDFEDNNL--SLNSVGSDSES---------------EKPASFAKTLTQSDANNGGGF 128
+ E+ EDNNL ++G D E+ F K LT SD
Sbjct: 17 SQEVQEEDNNLYKQQRALGQDLHRRQGVSGGGPSHSHGVEREHMFDKVLTPSDVGKLNRL 76
Query: 129 SVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQ 188
VP+ AE FP A + +D G +W+FR+ Y G+ + +++T GWS FV
Sbjct: 77 VVPKQHAERFFP----AAGAGSTQLCFQDRGGALWQFRYSYWGSSQSYVMTKGWSRFVRA 132
Query: 189 KKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+L AGD++ F R+ G + R ++
Sbjct: 133 ARLAAGDTVTFSRSGGGRYFIEYRHCQR 160
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 111 ASFAKTLTQSDA-NNGGGFSVP-RYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
SF K LT +DA N F VP R A + P+L P+ KD+HG+ W +
Sbjct: 32 VSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVPLYI---KDMHGKEWVINYT 88
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD-GDLCVGIRRAKK 216
++ H+L++GW F N +LV GD++VF+R+ D G+ +G+RR K
Sbjct: 89 WKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLK 135
>gi|281204557|gb|EFA78752.1| bromodomain-containing protein [Polysphondylium pallidum PN500]
Length = 1923
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 12/119 (10%)
Query: 279 NGGRVKPEMVLEAVALAASGKPFEVVYYPRASTPEFCVKASAVKAAMRVHWLCGMRFKMA 338
N G + E+ L ++ ++G V+Y+ + P++ V AS V+ ++ HW +FKM
Sbjct: 1435 NPGLHQAEITL---SVLSTGHTISVLYH-VSDIPDYLVLASRVRKSLESHWASDDQFKMF 1490
Query: 339 FETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV 397
+ E+ WF G I+ V +DP ++P+S W + V WD+ RVSPW +ELV
Sbjct: 1491 YIDEN----QWFTGVITEVSPSDP-TYPDSLWERIVVRWDQDG---GEGRVSPWEIELV 1541
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 95 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRY 153
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 154 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 187
>gi|312282591|dbj|BAJ34161.1| unnamed protein product [Thellungiella halophila]
Length = 340
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 6/102 (5%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F K +T SD +P++ AE FP +++ V+ V+ +DV G++W+FR+ Y
Sbjct: 184 FEKAVTPSDVGKLNRLVIPKHHAEKHFPLP--SSNVSVKGVLLNFEDVTGKVWRFRYSYW 241
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA--QDGDLCVG 210
+ + ++LT GWS FV +K L AGD + F R+ QD L +G
Sbjct: 242 NSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSDGQDQQLYIG 283
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-KDVHGEIWKFRHIYRG 171
F K LT SD +P+ AE FP D TV+ +D +G++W+FR+ Y
Sbjct: 36 FDKVLTPSDVGKLNRLVIPKQHAENFFP----LEDNQNGTVLDFQDKNGKMWRFRYSYWN 91
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+ + +++T GWS FV +KKL AGD++ F R D R +K
Sbjct: 92 SSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDNAQPERRRK 136
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-KDVHGEIWKFRHIYRG 171
F K LT SD +P+ AE FP D TV+ +D +G++W+FR+ Y
Sbjct: 31 FDKVLTPSDVGKLNRLVIPKQHAENFFP----LEDNQNGTVLDFQDKNGKMWRFRYSYWN 86
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+ + +++T GWS FV +KKL AGD++ F R D R +K
Sbjct: 87 SSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIPDDNAQPERRRK 131
>gi|297827087|ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
lyrata]
gi|297327265|gb|EFH57685.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT---VVAKDVH 159
+D EK A F K LT SD +P+ AE FP L A V+ + +D
Sbjct: 28 NDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEE 86
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF--LRAQDGDLCVGIRR 213
G+ W+FR+ Y + + ++LT GWS +V +K L AGD ++F RA G +G RR
Sbjct: 87 GKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRANGGRFFIGWRR 142
>gi|255579355|ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
gi|223529926|gb|EEF31854.1| transcription factor, putative [Ricinus communis]
Length = 373
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 107 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
+EK F K LT SD +P+ AE FP + D + + +D G+ W+FR
Sbjct: 131 NEKEGMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLGGDSVDKGL-LLSFEDELGKCWRFR 189
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGD-LCVGIRR 213
+ Y + + ++LT GWS +V K+L AGD ++F R + DG+ L +G RR
Sbjct: 190 YSYWNSSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRR 238
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 105 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRY 163
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 164 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 197
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 82 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRY 140
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 141 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 174
>gi|449466693|ref|XP_004151060.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
RAV1-like [Cucumis sativus]
Length = 317
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 102 GSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
GSDS E F KT+T SD +P+ AE FP + + +D+ G+
Sbjct: 159 GSDSNRE--VLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGK 216
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGI 211
+W+FR+ Y + + ++LT GWS FV L AGD + FLR+ D + I
Sbjct: 217 VWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYI 266
>gi|449526628|ref|XP_004170315.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
RAV1-like, partial [Cucumis sativus]
Length = 311
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 102 GSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGE 161
GSDS E F KT+T SD +P+ AE FP + + +D+ G+
Sbjct: 153 GSDSNRE--VLFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGK 210
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGI 211
+W+FR+ Y + + ++LT GWS FV L AGD + FLR+ D + I
Sbjct: 211 VWRFRYSYWNSSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYI 260
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 82 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRY 140
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 141 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 174
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 58/132 (43%), Gaps = 18/132 (13%)
Query: 87 NEIDFEDNNLSLNSVGSDSES-------------EKPASFAKTLTQSDANNGGGFSVPRY 133
E D EDN ++G D E+ F K LT SD VP+
Sbjct: 18 QEEDQEDNLDQQRAIGQDLHQQGGGGGGEPSHGVEREHMFDKVLTPSDVGKLNRLVVPKQ 77
Query: 134 CAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVA 193
AE FP A + +D G +W+FR+ Y G+ + +++T GWS FV +L A
Sbjct: 78 HAERFFP-----AAGAGTQLCFQDCGGALWQFRYSYWGSSQSYVMTKGWSRFVRAARLAA 132
Query: 194 GDSIVFLRAQDG 205
GD++ F R G
Sbjct: 133 GDTVTFSRGAGG 144
>gi|302398541|gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
Length = 382
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 104 DSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIW 163
DS+ EK F K LT SD +P+ AE FP + D + + +D G+ W
Sbjct: 113 DSDDEKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLG--SGDSGL-LLSFEDESGKSW 169
Query: 164 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF--LRAQDGDLCVGIRR 213
+FR+ Y + + ++LT GWS +V +K+L AGD ++F RA L +G RR
Sbjct: 170 RFRYSYWNSSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSIGWRR 221
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD + + + +D +G++W+FR+
Sbjct: 48 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRY 106
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 107 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
E+ F K +T SD +P+ AE FP LD +A+ + +D G+ W+FR+
Sbjct: 152 EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRY 210
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR--AQDGD--LCVGIRRAKKG------ 217
Y + + +++T GWS FV +KKL AGD + F R + G L + RR
Sbjct: 211 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 270
Query: 218 --------------IGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLR 250
+GG N Y S ++ NN NP G +LR
Sbjct: 271 AHHFFHRSPNYMSHLGGRNPYGSGAYSYNNAV----NPCSGSVFYLR 313
>gi|357127299|ref|XP_003565320.1| PREDICTED: putative AP2/ERF and B3 domain-containing protein
Os01g0140700-like [Brachypodium distachyon]
Length = 312
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD VP+ AE FP + T + +D G++W+FR+ Y +
Sbjct: 164 FEKAVTPSDVGKLNRLVVPKQHAERHFPEPEKTTGSKGVLLNFEDGEGKVWRFRYSYWNS 223
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVF 199
+ ++LT GWS FV +K L AGD+IVF
Sbjct: 224 SQSYVLTKGWSRFVREKGLAAGDTIVF 250
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD + + + +D +G++W+FR+
Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRY 109
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 110 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|224111734|ref|XP_002315958.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222864998|gb|EEF02129.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 367
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F K +T SD +P+ AE FP L T+ + V+ +DV G++W+FR+ Y
Sbjct: 206 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSTSSNSTKGVLLNLEDVSGKVWRFRYSYW 264
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 265 NSSQSYVLTKGWSRFVKEKNLKAGDIVCFQRS 296
>gi|30686669|ref|NP_850260.1| B3 domain-containing protein [Arabidopsis thaliana]
gi|75151444|sp|Q8GYJ2.1|Y2608_ARATH RecName: Full=B3 domain-containing protein At2g36080; AltName:
Full=Protein AUXIN RESPONSIVE FACTOR 31
gi|26450255|dbj|BAC42244.1| putative RAV2-like DNA binding protein [Arabidopsis thaliana]
gi|330254110|gb|AEC09204.1| B3 domain-containing protein [Arabidopsis thaliana]
Length = 244
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT---VVAKDVH 159
+D EK A F K LT SD +P+ AE FP L A V+ + +D
Sbjct: 28 NDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEE 86
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD--GDLCVGIRR 213
G+ W+FR+ Y + + ++LT GWS +V +K L AGD ++F R + G +G RR
Sbjct: 87 GKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 82 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRY 140
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 141 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 174
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 82 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRY 140
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 141 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 174
>gi|75139062|sp|Q7EZD5.1|Y8577_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0157700
gi|37806146|dbj|BAC99651.1| AP2 domain protein RAP2.8 (RAV2)-like [Oryza sativa Japonica Group]
gi|125602248|gb|EAZ41573.1| hypothetical protein OsJ_26107 [Oryza sativa Japonica Group]
Length = 287
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 107 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
+E+ F K +T SD VP+ AE FP A + +D G W+FR
Sbjct: 65 AEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFP-----AAAAGTQLCFEDRAGTPWRFR 119
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+ Y G+ + +++T GWS FV +L AGD++ F RA DG + R +
Sbjct: 120 YSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHR 169
>gi|125560208|gb|EAZ05656.1| hypothetical protein OsI_27883 [Oryza sativa Indica Group]
Length = 286
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 107 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
+E+ F K +T SD VP+ AE FP A + +D G W+FR
Sbjct: 65 AEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFP-----AAAAGTQLCFEDRAGTPWRFR 119
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+ Y G+ + +++T GWS FV +L AGD++ F RA DG + R +
Sbjct: 120 YSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYRHCHR 169
>gi|30686674|ref|NP_181152.2| B3 domain-containing protein [Arabidopsis thaliana]
gi|330254109|gb|AEC09203.1| B3 domain-containing protein [Arabidopsis thaliana]
Length = 173
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT---VVAKDVH 159
+D EK A F K LT SD +P+ AE FP L A V+ + +D
Sbjct: 28 NDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEE 86
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD--GDLCVGIRR 213
G+ W+FR+ Y + + ++LT GWS +V +K L AGD ++F R + G +G RR
Sbjct: 87 GKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 95 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRY 153
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 154 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 187
>gi|356495986|ref|XP_003516851.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Glycine max]
Length = 384
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 9/102 (8%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--------KDVHGEIWK 164
F K +T SD +P+ AE FP L A+ T A +DV G++W+
Sbjct: 205 FQKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSAANGVSATATAAKGVLLNFEDVGGKVWR 263
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
FR+ Y + + ++LT GWS FV +K L AGD++ F R+ D
Sbjct: 264 FRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQRSTGPD 305
>gi|58982624|gb|AAW83473.1| RAV transcription factor [Capsicum annuum]
Length = 399
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP + V + +D++G++W+FR+ Y +
Sbjct: 213 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNGNNSKGV-LLNFEDLNGKVWRFRYSYWNS 271
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ ++LT GWS FV +K L AGD + F R+ GD
Sbjct: 272 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGD 305
>gi|224063160|ref|XP_002301020.1| predicted protein [Populus trichocarpa]
gi|222842746|gb|EEE80293.1| predicted protein [Populus trichocarpa]
Length = 237
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 375 VTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPFDGQFTMPL- 433
+TWDEP++LQNVKRVSPW VE V+ + L SP KKLR P F +G+ P+
Sbjct: 1 ITWDEPEVLQNVKRVSPWQVEFVAT--TLPLQDASPPMKKLRYPNDSGFLTNGELFFPMS 58
Query: 434 -FSGNPLGPSSPLCCLSDNTSAGIQGARHAQF 464
+ + G + AG+QGAR F
Sbjct: 59 DLTNSRTGHMNASMLNYSTFPAGMQGARQDPF 90
>gi|33320073|gb|AAQ05799.1|AF478458_1 DNA binding protein Rav [Capsicum annuum]
Length = 386
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP + V + +D++G++W+FR+ Y +
Sbjct: 200 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNGNNSKGV-LLNFEDLNGKVWRFRYSYWNS 258
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ ++LT GWS FV +K L AGD + F R+ GD
Sbjct: 259 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGD 292
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD+ + ++ G+ W+FR+
Sbjct: 2 EKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRY 60
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV K+L+AGD+++F R
Sbjct: 61 SYWNSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
Length = 505
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
E+ F K +T SD +P+ AE FP LD +A+ + +D G+ W+FR+
Sbjct: 107 EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRY 165
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 166 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 200
>gi|449434658|ref|XP_004135113.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
RAV2-like [Cucumis sativus]
gi|449529138|ref|XP_004171558.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
RAV2-like [Cucumis sativus]
Length = 344
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
Query: 94 NNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQT 152
N L+ D E+ + F K +T SD +P+ AE FP + TA
Sbjct: 164 QNRFLSGSDDDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFPLQTGSTASSKGLL 223
Query: 153 VVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA--QDGDLCV 209
+ +D G++W+FR+ Y + + ++LT GWS FV +K L AGD + FL++ QD L +
Sbjct: 224 LNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYI 282
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
+K F K +T SD +P+ AE FP LD A+ + +D G++W+FR+
Sbjct: 85 DKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRY 143
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 144 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCR 177
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 11/130 (8%)
Query: 85 PANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY 144
PA+ ED+ G + EK F K +T SD +P+ AE FP LD
Sbjct: 5 PAHARVVEDSE---RPRGGVAWVEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDA 61
Query: 145 TADPPVQTVVA--------KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDS 196
+A +D G+ W+FR+ Y + + +++T GWS FV +K+L AGD+
Sbjct: 62 SAAAAAAAAGGGKGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDT 121
Query: 197 IVFLRAQDGD 206
++F R G+
Sbjct: 122 VLFARGAGGE 131
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
E+ F K +T SD +P+ AE FP LD +A+ + +D G+ W+FR+
Sbjct: 107 EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRY 165
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 166 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 200
>gi|255566851|ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1, putative [Ricinus communis]
Length = 371
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Query: 94 NNLSLNSVG-SDSE----SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADP 148
N ++N+VG S SE + F K +T SD +P+ AE FP +
Sbjct: 180 NRTNMNNVGLSGSERIIMKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNST 239
Query: 149 PVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ +D+ G++W+FR+ Y + + ++LT GWS FV +K L AGD + FL++ D
Sbjct: 240 KGVLLNFEDITGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVRFLKSTGPD 297
>gi|239977778|sp|Q0DXB1.2|Y2641_ORYSJ RecName: Full=B3 domain-containing protein Os02g0764100
Length = 190
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 11/155 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD VP+ AE FP ++D + +D G++W+FR+ +
Sbjct: 17 FEKAVTPSDVGKLNRLLVPKQHAEKHFPLRRTSSDASGVLLNFEDGEGKVWRFRYSCWNS 76
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVF---LRAQDGDLCVGIRRAKKGIGGGNEYPSSGW 229
+ ++LT GWS FV +K L AGD+IVF D L + ++ G+E P +
Sbjct: 77 SQSYVLTKGWSRFVREKGLRAGDTIVFSGSAYGPDKLLFIDCKKNNTAAATGDEKPITSG 136
Query: 230 NSNN-----GSCVTGNPFGGFSCFLREEENKMARN 259
+ G +TG GG C RE +M +
Sbjct: 137 EATRVVRLFGMDITG---GGGDCRKRERAVEMGQE 168
>gi|224099325|ref|XP_002311438.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222851258|gb|EEE88805.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 369
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F K +T SD +P+ AE FP L T+ + V+ +D+ G++W+FR+ Y
Sbjct: 205 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSTSSCSTKGVLLNLEDMSGKVWRFRYSYW 263
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 264 NSSQSYVLTKGWSRFVKEKSLKAGDIVCFQRS 295
>gi|292668949|gb|ADE41129.1| AP2 domain class transcription factor [Malus x domestica]
Length = 406
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 95 NLSLNSVGSDSESEKPAS---FAKTLTQSDANNGGGFSVPRYCAETIFP-------RLDY 144
N SL G+D+ A F K +T SD +P+ AE FP L
Sbjct: 192 NGSLGLFGTDNSGVPKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSAATLTV 251
Query: 145 TADPPVQTVVA--KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+A + V+ +DV G++W+FR+ Y + + ++LT GWS FV +K L+AGD + F R+
Sbjct: 252 SASTACKGVLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLMAGDIVSFQRS 311
Query: 203 QDGD 206
D
Sbjct: 312 TGPD 315
>gi|4678220|gb|AAD26965.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
gi|20152528|emb|CAD29643.1| putative auxin response factor 31 [Arabidopsis thaliana]
gi|20197990|gb|AAM15343.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
Length = 158
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 103 SDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT---VVAKDVH 159
+D EK A F K LT SD +P+ AE FP L A V+ + +D
Sbjct: 13 NDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFP-LAAAAADAVEKGLLLCFEDEE 71
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF--LRAQDGDLCVGIRR 213
G+ W+FR+ Y + + ++LT GWS +V +K L AGD ++F R+ G +G RR
Sbjct: 72 GKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 127
>gi|242042451|ref|XP_002468620.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
gi|241922474|gb|EER95618.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
Length = 330
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 34 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 92
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRR 213
Y + + +++T GWS FV +K+L AGD++ F R A G L + RR
Sbjct: 93 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAARGRLFIDWRR 142
>gi|297833940|ref|XP_002884852.1| hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp.
lyrata]
gi|297330692|gb|EFH61111.1| hypothetical protein ARALYDRAFT_897360 [Arabidopsis lyrata subsp.
lyrata]
Length = 263
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 89 IDFEDNNLSLNSVGSD--SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA 146
++ N LSL+ + + S++ + F K+LT SD +P+ AE FP +
Sbjct: 3 VNHYHNTLSLHQHHQNDVAISQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNGG 62
Query: 147 DPPVQTVVA------KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 200
D V T +D G+ WKFR+ Y + + ++LT GWS +V K L AGD + F
Sbjct: 63 DDDVATTEKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQ 122
Query: 201 RAQDG--DLCVGIRR 213
R + L +G RR
Sbjct: 123 RHRFDLHRLFIGWRR 137
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 33 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRY 91
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRR 213
Y + + +++T GWS FV +K+L AGD++ F R A G L + RR
Sbjct: 92 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 141
>gi|356570873|ref|XP_003553608.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
max]
Length = 299
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 106 ESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAK-------DV 158
E EK A F K LT SD +P+ AE FP LD + + AK D
Sbjct: 70 EQEKEAMFEKPLTPSDVGKLNRLVIPKQHAEKYFP-LDSSGG---DSAAAKGLLLSFEDE 125
Query: 159 HGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
G+ W+FR+ Y + + ++LT GWS +V K+L AGD ++F R
Sbjct: 126 SGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLHAGDVVLFHR 168
>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
Length = 273
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 14/128 (10%)
Query: 85 PANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY 144
PA+ FED+ G + EK F K +T SD +P+ AE FP LD
Sbjct: 5 PAHARVFEDSE---RPRGGVAWLEKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDA 61
Query: 145 TADPPVQTVVA-----------KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVA 193
+A + A +D G+ W+FR+ Y + + +++T GWS FV +K+L A
Sbjct: 62 SAAAASASASAGGGKAGLVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGA 121
Query: 194 GDSIVFLR 201
GD+++F R
Sbjct: 122 GDTVLFAR 129
>gi|115447949|ref|NP_001047754.1| Os02g0683500 [Oryza sativa Japonica Group]
gi|75122233|sp|Q6EU30.1|Y2835_ORYSJ RecName: Full=B3 domain-containing protein Os02g0683500
gi|50251902|dbj|BAD27840.1| RAV-like B3 domain DNA binding protein-like [Oryza sativa Japonica
Group]
gi|113537285|dbj|BAF09668.1| Os02g0683500 [Oryza sativa Japonica Group]
gi|215766728|dbj|BAG98956.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 412
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 91 EKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRY 149
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 150 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSR 183
>gi|125540696|gb|EAY87091.1| hypothetical protein OsI_08488 [Oryza sativa Indica Group]
Length = 411
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 90 EKEHMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRY 148
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 149 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFSR 182
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 3/104 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP L+ + V + +D +G++W+FR+ Y +
Sbjct: 34 FDKVLTPSDVGKLNRLVIPKQHAENYFP-LEGNQNGTV--LDFQDRNGKMWRFRYSYWNS 90
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKK 216
+ +++T GWS FV +KKL AGD++ F R D R +K
Sbjct: 91 SQSYVMTKGWSRFVKEKKLFAGDTVSFHRGFIPDDNAPPERRRK 134
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD ++ + +D G+ W+FR+
Sbjct: 32 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRY 90
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRR 213
Y + + +++T GWS FV +K+L AGD++ F R A G L + RR
Sbjct: 91 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 140
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD ++ + +D G+ W+FR+
Sbjct: 32 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLLSFEDRTGKPWRFRY 90
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRR 213
Y + + +++T GWS FV +K+L AGD++ F R A G L + RR
Sbjct: 91 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 140
>gi|304308255|gb|ADL70440.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308257|gb|ADL70441.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 228
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 375 VTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF---DGQFTM 431
+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ DG+
Sbjct: 1 ITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGEILF 58
Query: 432 P---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
P L S PS + S AG+QGAR FG
Sbjct: 59 PQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 94
>gi|284811283|gb|ADB96380.1| auxin response factor 17 [Arabidopsis thaliana]
gi|284811285|gb|ADB96381.1| auxin response factor 17 [Arabidopsis thaliana]
gi|284811287|gb|ADB96382.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308237|gb|ADL70431.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308239|gb|ADL70432.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308243|gb|ADL70434.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308245|gb|ADL70435.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308249|gb|ADL70437.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308253|gb|ADL70439.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308261|gb|ADL70443.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 228
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 375 VTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF---DGQFTM 431
+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ DG+
Sbjct: 1 ITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGEILY 58
Query: 432 P---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
P L S PS + S AG+QGAR FG
Sbjct: 59 PQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 94
>gi|284811279|gb|ADB96378.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308247|gb|ADL70436.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 228
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 375 VTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF---DGQFTM 431
+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ DG+
Sbjct: 1 ITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGEILY 58
Query: 432 P---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
P L S PS + S AG+QGAR FG
Sbjct: 59 PQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 94
>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Vitis vinifera]
Length = 461
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
E+ F K +T SD +P+ AE FP LD +A + +D G+ W+FR+
Sbjct: 134 EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRY 192
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 193 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERG 227
>gi|284811281|gb|ADB96379.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308241|gb|ADL70433.1| auxin response factor 17 [Arabidopsis thaliana]
gi|304308259|gb|ADL70442.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 228
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 375 VTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF---DGQFTM 431
+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ DG+
Sbjct: 1 ITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGEILF 58
Query: 432 P---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
P L S PS + S AG+QGAR FG
Sbjct: 59 PQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 94
>gi|304308251|gb|ADL70438.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 228
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 375 VTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPARKKLRLPQQLDFPF---DGQFTM 431
+TWDEP++LQNVKRV+PW VE+ ++ +H +PF PA K+L+ PQ DG+
Sbjct: 1 ITWDEPEILQNVKRVNPWQVEIAAHATQLH-TPFPPA-KRLKYPQPGGGFLSGDDGEILY 58
Query: 432 P---LFSGNPLGPSSPLCCLSDNTSAGIQGARHAQFG 465
P L S PS + S AG+QGAR FG
Sbjct: 59 PQSGLSSAAAPDPSPSMFSYS-TFPAGMQGARQYDFG 94
>gi|413934037|gb|AFW68588.1| hypothetical protein ZEAMMB73_576107 [Zea mays]
gi|413950990|gb|AFW83639.1| hypothetical protein ZEAMMB73_082033 [Zea mays]
Length = 242
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 101 VGSDSESEKPAS-----FAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQTVV 154
+G+D+ S PA F K +T SD +P+ AE FP L A T V
Sbjct: 36 LGNDNRSSSPACAREHLFDKAVTPSDVGKLNRLVIPKQHAERHFPLHLAAAAGGGESTGV 95
Query: 155 A---KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
+D G++W+FR+ Y + + ++LT GWS FV +K L AGD + F R+ G
Sbjct: 96 LLNLEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAG 149
>gi|357488335|ref|XP_003614455.1| AP2 domain-containing transcription factor [Medicago truncatula]
gi|355515790|gb|AES97413.1| AP2 domain-containing transcription factor [Medicago truncatula]
Length = 412
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 8/115 (6%)
Query: 95 NLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPR-----LDYTADPP 149
N + ++ +D ++ + A F K +T SD +P+ AE FP + +A
Sbjct: 178 NFASSAYNTDKKA-REALFEKVVTPSDVGKLNRLVIPKQHAEKHFPLQKADCVQGSASAA 236
Query: 150 VQTVVA--KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ V+ +D+ G++W+FR+ Y + + ++LT GWS FV +K L AGD++ F R+
Sbjct: 237 GKGVLLNFEDIGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQRS 291
>gi|326534110|dbj|BAJ89405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT-----VVAKDVHGEIWKFRH 167
F K +T SD VP+ AE FP L TA+ T + +D G++W+FR+
Sbjct: 174 FEKAVTPSDVGKLNRLVVPKQHAEKHFP-LKCTAETTTTTGNGVLLNFEDGEGKVWRFRY 232
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF---LRAQDGDLCVGIRRAKKGIGGGNEY 224
Y + + ++LT GWS+FV +K L AGDSIVF Q+ L + ++ GG
Sbjct: 233 SYWNSSQSYVLTKGWSSFVREKGLGAGDSIVFSSSAYGQEKQLFINCKKNTTMNGGKTAL 292
Query: 225 P 225
P
Sbjct: 293 P 293
>gi|449457654|ref|XP_004146563.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Cucumis sativus]
Length = 345
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD +++ + +D G++W+FR+
Sbjct: 62 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRCGKLWRFRY 120
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV K+L AGD + F R
Sbjct: 121 SYWTSSQSYVMTKGWSRFVKDKRLDAGDIVSFQR 154
>gi|326496232|dbj|BAJ94578.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 353
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT-----VVAKDVHGEIWKFRH 167
F K +T SD VP+ AE FP L TA+ T + +D G++W+FR+
Sbjct: 174 FEKAVTPSDVGKLNRLVVPKQHAEKHFP-LKCTAETTTTTGNGVLLNFEDGEGKVWRFRY 232
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF---LRAQDGDLCVGIRRAKKGIGGGNEY 224
Y + + ++LT GWS+FV +K L AGDSIVF Q+ L + ++ GG
Sbjct: 233 SYWNSSQSYVLTKGWSSFVREKGLGAGDSIVFSSSAYGQEKQLFINCKKNTTMNGGKTAL 292
Query: 225 P 225
P
Sbjct: 293 P 293
>gi|18409138|ref|NP_564947.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
gi|334183743|ref|NP_001185352.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
gi|75340021|sp|P82280.1|RAV2_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription
repressor RAV2; AltName: Full=Ethylene-responsive
transcription factor RAV2; AltName: Full=Protein RELATED
TO ABI3/VP1 2; AltName: Full=Protein RELATED TO APETALA2
8; AltName: Full=Protein TEMPRANILLO 2
gi|12323214|gb|AAG51586.1|AC011665_7 putative DNA-binding protein (RAV2-like) [Arabidopsis thaliana]
gi|12324134|gb|AAG52035.1|AC011914_5 RAV2; 17047-15989 [Arabidopsis thaliana]
gi|13430800|gb|AAK26022.1|AF360312_1 putative DNA-binding protein(RAV2 [Arabidopsis thaliana]
gi|3868859|dbj|BAA34251.1| RAV2 [Arabidopsis thaliana]
gi|15810645|gb|AAL07247.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
gi|332196726|gb|AEE34847.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
gi|332196727|gb|AEE34848.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
Length = 352
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA---KDVHGEIWKFRHIY 169
F K +T SD +P+ AE FP + P V V +DV+G++W+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLP--SPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>gi|21554039|gb|AAM63120.1| putative RAV2-like DNA-binding protein [Arabidopsis thaliana]
Length = 352
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA---KDVHGEIWKFRHIY 169
F K +T SD +P+ AE FP + P V V +DV+G++W+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLP--SPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>gi|194475604|gb|ACF74549.1| RAV [Nicotiana tabacum]
Length = 385
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP + V + +D++G++W+FR+ Y +
Sbjct: 198 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNGNTSKGV-LLNFEDLNGKVWRFRYSYWNS 256
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ ++LT GWS FV +K L AGD + F R+ D
Sbjct: 257 SQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGED 290
>gi|226500200|ref|NP_001151105.1| DNA-binding protein RAV1 [Zea mays]
gi|195644338|gb|ACG41637.1| DNA-binding protein RAV1 [Zea mays]
Length = 395
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP +A + V+ +D G++W+FR+ Y
Sbjct: 216 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAGKVWRFRYSYW 275
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
+ + ++LT GWS FV +K L AGD + F R+ G
Sbjct: 276 NSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAG 310
>gi|297838653|ref|XP_002887208.1| AP2 domain-containing protein RAP2.8 [Arabidopsis lyrata subsp.
lyrata]
gi|297333049|gb|EFH63467.1| AP2 domain-containing protein RAP2.8 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA---KDVHGEIWKFRHIY 169
F K +T SD +P+ AE FP + P V V +DV+G++W+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLP--SPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLQAGDVVTFERS 278
>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
E+ F K +T SD +P+ AE FP LD +A + +D G+ W+FR+
Sbjct: 90 EREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRY 148
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 149 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFERG 183
>gi|357443089|ref|XP_003591822.1| AP2/ERF and B3 domain-containing transcription repressor TEM1
[Medicago truncatula]
gi|355480870|gb|AES62073.1| AP2/ERF and B3 domain-containing transcription repressor TEM1
[Medicago truncatula]
Length = 384
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-------------KDVH 159
F KT+T SD +P+ AE FP L+ A V+ +DV
Sbjct: 192 FEKTVTPSDVGKLNRLVIPKQHAEKHFP-LNAVAVAVACDGVSTAAAAAKGLLLNFEDVG 250
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ--DGDLCVGIRRAKKG 217
G++W+FR+ Y + + ++LT GWS FV +K L AGD++ F R+ D L + + G
Sbjct: 251 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVRFFRSTGPDRQLYIDCKARSIG 310
Query: 218 IGGG 221
+ GG
Sbjct: 311 VVGG 314
>gi|414880879|tpg|DAA58010.1| TPA: putative AP2/EREBP transcription factor superfamily protein
[Zea mays]
Length = 389
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 2/95 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP +A + V+ +D G++W+FR+ Y
Sbjct: 213 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAGKVWRFRYSYW 272
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
+ + ++LT GWS FV +K L AGD + F R+ G
Sbjct: 273 NSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAG 307
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K +T SD +P+ AE FP LD A+ + +D G+ W+FR+
Sbjct: 35 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRY 93
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + +++T GWS FV +K+L AGD++ F R
Sbjct: 94 SYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGR 127
>gi|2281641|gb|AAC49774.1| AP2 domain containing protein RAP2.8 [Arabidopsis thaliana]
Length = 334
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA---KDVHGEIWKFRHIY 169
F K +T SD +P+ AE FP + P V V +DV+G++W+FR+ Y
Sbjct: 170 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLP--SPSPAVTKGVLINFEDVNGKVWRFRYSY 227
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 228 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 260
>gi|351725319|ref|NP_001237600.1| RAV-like DNA-binding protein [Glycine max]
gi|72140114|gb|AAZ66389.1| RAV-like DNA-binding protein [Glycine max]
Length = 351
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 12/105 (11%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAD---PPVQTVVA--------KDVHGE 161
F KT+T SD +P+ AE FP L + D P V A +DV G+
Sbjct: 172 FEKTVTPSDVGKLNRLVIPKQHAEKHFP-LSGSGDESSPCVAGASAAKGMLLNFEDVGGK 230
Query: 162 IWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+W+FR+ Y + + ++LT GWS FV +K L AGD++ F ++ D
Sbjct: 231 VWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFKSTGPD 275
>gi|449437842|ref|XP_004136699.1| PREDICTED: B3 domain-containing protein At2g36080-like [Cucumis
sativus]
Length = 296
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-----------RLDYTADPPVQTVVA--KDVH 159
F K LT SD +P+ AE FP D + ++ +D
Sbjct: 42 FEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPSAAVATAAAAAAAGDSADKGLLLSFEDES 101
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-AQDGD-LCVGIRR 213
G+IW+FR+ Y + + ++LT GWS FV +K+L AGD +VF R +DGD L +G ++
Sbjct: 102 GKIWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHRRDGDRLFIGWKK 157
>gi|449534056|ref|XP_004173985.1| PREDICTED: B3 domain-containing protein At5g06250-like, partial
[Cucumis sativus]
Length = 281
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-----------RLDYTADPPVQTVVA--KDVH 159
F K LT SD +P+ AE FP D + ++ +D
Sbjct: 42 FEKPLTPSDVGKLNRLVIPKQYAEKYFPLSPSAAVATAAAAAAAGDSADKGLLLSFEDES 101
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR-AQDGD-LCVGIRR 213
G+IW+FR+ Y + + ++LT GWS FV +K+L AGD +VF R +DGD L +G ++
Sbjct: 102 GKIWRFRYSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVVFERHRRDGDRLFIGWKK 157
>gi|356537126|ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
max]
Length = 337
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 100 SVGSDSE--SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-- 155
+ G + E +K F K LT SD +P+ AE FP + + ++
Sbjct: 58 TTGGEQEILDDKEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSF 117
Query: 156 KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGD-LCVGIRR 213
+D G+ W+FR+ Y + + ++LT GWS +V K+L AGD ++F R + D L +G RR
Sbjct: 118 EDESGKCWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRR 177
Query: 214 ---------------AKKGIGGGNEYPSSGW 229
K G G GN + GW
Sbjct: 178 RRQSDAALPPAHVSSRKSGGGDGNSNKNEGW 208
>gi|326507492|dbj|BAK03139.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA------KDVHGEIWKFR 166
F KT+T SD +P+ AE FP +A V D G++W+FR
Sbjct: 196 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSASAAVPGECKGVLLNFDDATGKVWRFR 255
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ Y + + ++LT GWS FV +K L AGD++ F RA G+
Sbjct: 256 YSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVEFYRAASGN 295
>gi|209419749|gb|ACI46678.1| DNA-binding protein [Galega orientalis]
Length = 387
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA---------DPPVQTVVA-----KDV 158
F KT+T SD +P+ AE FP A P V +D+
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLGAVAAAVSVAVDGISPAVSAAKGLLLNFEDI 254
Query: 159 HGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDL-----CVGIRR 213
G++W+FR+ Y + + ++LT GWS FV +K L AGD++ F R+ D C
Sbjct: 255 GGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFCRSTGPDRQLYIDCKARSV 314
Query: 214 AKKGIGGGNEY 224
+ G+G GN Y
Sbjct: 315 SVVGVGIGNTY 325
>gi|255555825|ref|XP_002518948.1| transcription factor, putative [Ricinus communis]
gi|223541935|gb|EEF43481.1| transcription factor, putative [Ricinus communis]
Length = 406
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 56/114 (49%), Gaps = 5/114 (4%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
+K F K +T SD +P+ AE FP LD + + + +D G+ W+FR+
Sbjct: 98 QKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLLLNFEDKTGKAWRFRY 156
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRRAKKG 217
Y + + +++T GWS FV KKL AGD + F R A L + RR G
Sbjct: 157 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRGVGEAAKDRLYIDWRRRPDG 210
>gi|302398539|gb|ADL36564.1| ABI3L domain class transcription factor [Malus x domestica]
Length = 439
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 99 NSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDV 158
N + + E+ F K +T SD +P+ AE FP LD +++ + +D
Sbjct: 107 NEIYWPASCEREHMFEKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNDNGLFLNFQDR 165
Query: 159 HGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
G+ W+FR+ Y + + +++T GWS FV +KKL AGD + F R
Sbjct: 166 TGKPWRFRYSYWNSSQSYVITKGWSRFVKEKKLDAGDIVSFERG 209
>gi|15222622|ref|NP_173927.1| AP2/ERF and B3 domain-containing transcription factor TEM1
[Arabidopsis thaliana]
gi|75268206|sp|Q9C6M5.1|RAVL1_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription
repressor TEM1; AltName: Full=Protein TEMPRANILLO 1;
AltName: Full=RAV1-like ethylene-responsive
transcription factor TEM1
gi|12321505|gb|AAG50808.1|AC079281_10 DNA-binding protein RAV2, putative [Arabidopsis thaliana]
gi|20259539|gb|AAM13889.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
gi|21689705|gb|AAM67474.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
gi|332192521|gb|AEE30642.1| AP2/ERF and B3 domain-containing transcription factor TEM1
[Arabidopsis thaliana]
Length = 361
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA----DP-PVQTVVA--KDVHGEIWKF 165
F KT+T SD +P+ AE FP T +P P + V+ +D G++W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
R+ Y + + ++LT GWS FV +K L AGD + F R+ D
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 295
>gi|359482026|ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
vinifera]
Length = 346
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 107 SEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR 166
+E+ F K LT SD +P+ AE FP L + + +D G+ W+FR
Sbjct: 103 AERQPMFEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFR 161
Query: 167 HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGD-LCVGIRR 213
+ Y + + ++LT GWS FV +K+L AGD ++F R + D D +G RR
Sbjct: 162 YSYWNSSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRR 210
>gi|357446313|ref|XP_003593434.1| B3 domain-containing transcription repressor VAL2 [Medicago
truncatula]
gi|355482482|gb|AES63685.1| B3 domain-containing transcription repressor VAL2 [Medicago
truncatula]
Length = 888
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
Query: 96 LSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA 155
L L + DS S F KTL+ SDA G +P+ CAET FP + P++ + A
Sbjct: 327 LELQQISVDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKILDA 386
Query: 156 KDVHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRR 213
K G+ W F+ + R + G + + +L AGD++ F R + +G L +G R+
Sbjct: 387 K---GKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRK 443
Query: 214 AKKGIGGGNEYPSSGWNSNNGSCVTGNPF 242
A N PS + +N + TGN F
Sbjct: 444 AT------NPLPS---DQDNEANKTGNGF 463
>gi|356555034|ref|XP_003545844.1| PREDICTED: B3 domain-containing protein Os07g0563300-like [Glycine
max]
Length = 854
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 95 NLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVV 154
+L L + DS S F KTL+ SDA G +P+ CAET FP + P++ +
Sbjct: 308 DLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKIL- 366
Query: 155 AKDVHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIR 212
D G+ W F+ + R + G + + +L AGD++ F R + +G L +G R
Sbjct: 367 --DAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFR 424
Query: 213 RAKKGI 218
+A +
Sbjct: 425 KASSAV 430
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD ++ + +D G+ W+FR+ Y +
Sbjct: 40 FDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYWNS 98
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVGIRR 213
+ +++T GWS FV +K+L AGD++ F R A G L + RR
Sbjct: 99 SQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 143
>gi|297845604|ref|XP_002890683.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
lyrata]
gi|297336525|gb|EFH66942.1| hypothetical protein ARALYDRAFT_890147 [Arabidopsis lyrata subsp.
lyrata]
Length = 357
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYT-----ADPPVQTVVA--KDVHGEIWKF 165
F KT+T SD +P+ AE FP T + P + V+ +D G++W+F
Sbjct: 192 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPATTTAMGMSPSPTKGVLINLEDRTGKVWRF 251
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
R+ Y + + ++LT GWS FV +K L AGD + F R+ D
Sbjct: 252 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 292
>gi|356576289|ref|XP_003556265.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Glycine max]
Length = 362
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 10/100 (10%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPR----------LDYTADPPVQTVVAKDVHGEI 162
F KT+TQSD +P+ AE FP + A + +DV G++
Sbjct: 178 FEKTVTQSDVGKLNRLVIPKQHAEKHFPLSGSGGGALPCMAAAAGAKGMLLNFEDVGGKV 237
Query: 163 WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
W+FR+ Y + + ++LT GWS FV +K L AGD++ F ++
Sbjct: 238 WRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFKS 277
>gi|164458454|gb|ABY57634.1| RAV1 [Solanum lycopersicum]
Length = 372
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA--DPPVQTVVA--KDVHGEIWKFRHI 168
F K +T SD +P+ AE FP + D + V+ +D++G++W+FR+
Sbjct: 203 FEKVVTPSDVGKLNRLVIPKQHAERYFPLVAKVNKNDNTSKGVLLNFEDMNGKMWRFRYS 262
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + ++LT GWS +V +KKL AGD + F R
Sbjct: 263 YWNSSQSYVLTKGWSRYVKEKKLKAGDIVSFKR 295
>gi|125571663|gb|EAZ13178.1| hypothetical protein OsJ_03098 [Oryza sativa Japonica Group]
Length = 231
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 10/124 (8%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP +A + V+ +D G++W+FR+ Y
Sbjct: 54 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYW 113
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA-----QDGDL---CVGIRRAKKGIGGGN 222
+ + ++LT GWS FV +K L AGD + F R+ DG L C +R +
Sbjct: 114 NSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPA 173
Query: 223 EYPS 226
+ P+
Sbjct: 174 DQPA 177
>gi|326507026|dbj|BAJ95590.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 168
Score = 59.3 bits (142), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 613 GHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMF---GIERSDMLSHVLYQDASGAIKR 669
GH KV +E +GR +DLS +SY EL+ L +MF + +D + V Y+D G
Sbjct: 90 GHVKVKMEGVPIGRMVDLSRHASYHELHHTLRLMFPSSTVHHADPYA-VTYEDGDGDWML 148
Query: 670 TGDEPFSDFMKSAKRLTILM 689
GD P+ +F KSAKRL ILM
Sbjct: 149 VGDVPWEEFSKSAKRLKILM 168
>gi|356549413|ref|XP_003543088.1| PREDICTED: B3 domain-containing protein Os07g0563300-like isoform 2
[Glycine max]
Length = 855
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 95 NLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVV 154
+L L + DS S F KTL+ SDA G +P+ CAET FP + P++ +
Sbjct: 309 DLELQQISIDSNSVITPLFQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKIL- 367
Query: 155 AKDVHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIR 212
D G+ W F+ + R + G + + +L AGD++ F R + +G L +G R
Sbjct: 368 --DAKGKEWIFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFR 425
Query: 213 RA 214
+A
Sbjct: 426 KA 427
>gi|242058413|ref|XP_002458352.1| hypothetical protein SORBIDRAFT_03g031860 [Sorghum bicolor]
gi|241930327|gb|EES03472.1| hypothetical protein SORBIDRAFT_03g031860 [Sorghum bicolor]
Length = 413
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP +A + V+ +D G++W+FR+ Y
Sbjct: 222 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNLEDAAGKVWRFRYSYW 281
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD + F R+
Sbjct: 282 NSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRS 313
>gi|115439333|ref|NP_001043946.1| Os01g0693400 [Oryza sativa Japonica Group]
gi|75247719|sp|Q8RZX9.1|Y1934_ORYSJ RecName: Full=AP2/ERF and B3 domain-containing protein Os01g0693400
gi|18565433|dbj|BAB84620.1| DNA-binding protein RAV1-like [Oryza sativa Japonica Group]
gi|113533477|dbj|BAF05860.1| Os01g0693400 [Oryza sativa Japonica Group]
gi|215768937|dbj|BAH01166.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP +A + V+ +D G++W+FR+ Y
Sbjct: 216 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYW 275
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA-----QDGDLCV 209
+ + ++LT GWS FV +K L AGD + F R+ DG L +
Sbjct: 276 NSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFI 319
>gi|125527343|gb|EAY75457.1| hypothetical protein OsI_03358 [Oryza sativa Indica Group]
Length = 361
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP +A + V+ +D G++W+FR+ Y
Sbjct: 184 FDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYW 243
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA-----QDGDLCV 209
+ + ++LT GWS FV +K L AGD + F R+ DG L +
Sbjct: 244 NSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFI 287
>gi|297740162|emb|CBI30344.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP L + + +D G+ W+FR+ Y +
Sbjct: 2 FEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWNS 60
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGD-LCVGIRR 213
+ ++LT GWS FV +K+L AGD ++F R + D D +G RR
Sbjct: 61 SQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRR 103
>gi|356503831|ref|XP_003520706.1| PREDICTED: B3 domain-containing protein At2g36080-like [Glycine
max]
Length = 276
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHI 168
K A F K LT SD +P+ AE FP LD +A + + +D G+ W+FR+
Sbjct: 52 KVAMFEKPLTPSDVGKLNRLVIPKQHAEKHFP-LDSSAAKGL-LLSFEDESGKCWRFRYS 109
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
Y + + ++LT GWS +V K+L AGD ++F R
Sbjct: 110 YWNSSQSYVLTKGWSRYVKDKRLHAGDVVLFHR 142
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 4/110 (3%)
Query: 288 VLEAVALAASGKPFEVVYY-PRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR 346
VL + + A VVYY PR S ++ V + A + + GMRF+M FE ED
Sbjct: 3 VLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVP- 61
Query: 347 ISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQN-VKRVSPWLVE 395
+ F GTI P W S W+ L+V WD+ + N +RVSPW ++
Sbjct: 62 VKKFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEID 110
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%)
Query: 601 RSFQVTESGLDTGHCKVFLESEDVGRTLDLSVLSSYEELYRRLAIMFGIERSDMLSHVLY 660
R Q +S + KV + VGR +DL+ L YE L L MF I+ V +
Sbjct: 352 REIQSQQSSIGRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFEIKDIKQNFKVAF 411
Query: 661 QDASGAIKRTGDEPFSDFMKSAKRLTI 687
D G + GD+P+ +F + +++ I
Sbjct: 412 NDNEGDTMKVGDDPWMEFCRMVRKIVI 438
>gi|449507228|ref|XP_004162969.1| PREDICTED: uncharacterized protein LOC101232454 [Cucumis sativus]
Length = 347
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD + + + +D +G+ W+FR+ Y +
Sbjct: 57 FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYWNS 115
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ +++T GWS FV +K+L AGD + F R
Sbjct: 116 SQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145
>gi|330840675|ref|XP_003292337.1| hypothetical protein DICPUDRAFT_157040 [Dictyostelium purpureum]
gi|325077436|gb|EGC31149.1| hypothetical protein DICPUDRAFT_157040 [Dictyostelium purpureum]
Length = 2131
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 306 YPRASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSRISWFMGTISSVQVADPISW 365
Y + P++ V AS V+ ++ ++W RFKM + + W+ GTI + +DP +
Sbjct: 1371 YHVSDIPDYLVLASKVRKSLLLNWHIDKRFKMYYPDSN----GWYNGTIIEISESDP-HF 1425
Query: 366 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
P+SPW L+V WD + RVS W +E
Sbjct: 1426 PDSPWERLKVKWDG---TEEEDRVSYWEIE 1452
>gi|413948352|gb|AFW81001.1| putative AP2/EREBP transcription factor superfamily protein [Zea
mays]
Length = 375
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQTVVAKDVHGEIWKFRHIYRG 171
F KT+T SD +P+ AE FP R P+ + +D G+ W+FR+ Y
Sbjct: 206 FDKTVTPSDVGKLNRLVIPKQHAERHFPLRRVQGGRAPILSF--EDAAGKAWRFRYSYWN 263
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
+ + ++LT GWS FV +K L AGD++ F R
Sbjct: 264 SSQSYVLTKGWSRFVKEKGLHAGDAVGFYR 293
>gi|326526131|dbj|BAJ93242.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 348
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-------KDVHGEIWKF 165
F K +T SD VP+ AE FP P T +D G++W+F
Sbjct: 169 FEKAVTPSDVGKLNRLVVPKQHAEKHFP---LKRSPETTTTTGNGVLLNFEDGQGKVWRF 225
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF 199
R+ Y + + ++LT GWS FV +K L AGDSI+F
Sbjct: 226 RYSYWNSSQSYVLTKGWSRFVREKGLGAGDSIMF 259
>gi|297817532|ref|XP_002876649.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
lyrata]
gi|297322487|gb|EFH52908.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
lyrata]
Length = 304
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 105 SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEI 162
S E+ F K +T SD +P+ AE FP + T + + ++ +D G
Sbjct: 15 SSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDNNKGLLLNFEDRSGNS 74
Query: 163 WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR--AQDGDLCVGIRRAKK 216
W+FR+ Y + + +++T GWS FV KKL AGD + F R L + RR K
Sbjct: 75 WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSGNKDKLYIDWRRRPK 130
>gi|449456452|ref|XP_004145963.1| PREDICTED: uncharacterized protein LOC101211271 [Cucumis sativus]
Length = 336
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 1/90 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K +T SD +P+ AE FP LD + + + +D +G+ W+FR+ Y +
Sbjct: 57 FDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYWNS 115
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ +++T GWS FV +K+L AGD + F R
Sbjct: 116 SQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145
>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
Length = 317
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 5 EKSIDPQLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRIPPLIFCRVSSL 64
+K+I+ LW C G ++ +P + S V YFPQGH E + S + IP +S L
Sbjct: 10 KKAINQALWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQKEADFDIP------ISHL 63
Query: 65 KFLADSETDEVYAKIKLVPIPANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANN 124
AD E DEV+A++ L P F + + + + SF++TLT S
Sbjct: 64 H--ADQENDEVFAQMTLQPFSQTADPFLLPDFGIQT------KQTIVSFSRTLTSS---- 111
Query: 125 GGGFSVPRYCAETIFPR 141
G S PR I PR
Sbjct: 112 --GESSPRPL--LILPR 124
>gi|224140599|ref|XP_002323669.1| predicted protein [Populus trichocarpa]
gi|222868299|gb|EEF05430.1| predicted protein [Populus trichocarpa]
Length = 917
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + D S F K L+ SDA G +P+ CAE FP + P++ +D
Sbjct: 312 LQQISGDPNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRI---QD 368
Query: 158 VHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAK 215
V G+ W F+ + R + G + + KL AGD++ F R +G L +G R+A
Sbjct: 369 VKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMKLQAGDTVTFSRMDPEGKLVMGFRKAS 428
Query: 216 KGIGGGNEYPSS 227
I + PS+
Sbjct: 429 NSIAMQDTQPSA 440
>gi|15228649|ref|NP_191756.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
thaliana]
gi|75182616|sp|Q9M268.1|NGA2_ARATH RecName: Full=B3 domain-containing transcription factor NGA2;
AltName: Full=Protein NGATHA 2
gi|6899895|emb|CAB71904.1| RAV-like protein [Arabidopsis thaliana]
gi|108385265|gb|ABF85768.1| At3g61970 [Arabidopsis thaliana]
gi|227060687|gb|ACP18972.1| NGATHA2 [Arabidopsis thaliana]
gi|332646767|gb|AEE80288.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
thaliana]
Length = 299
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 105 SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEI 162
S E+ F K +T SD +P+ AE FP + T + + ++ +D G
Sbjct: 15 SSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNS 74
Query: 163 WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
W+FR+ Y + + +++T GWS FV KKL AGD + F R
Sbjct: 75 WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>gi|26450371|dbj|BAC42301.1| putative RAV [Arabidopsis thaliana]
Length = 299
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 105 SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEI 162
S E+ F K +T SD +P+ AE FP + T + + ++ +D G
Sbjct: 15 SSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNS 74
Query: 163 WKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
W+FR+ Y + + +++T GWS FV KKL AGD + F R
Sbjct: 75 WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
>gi|357445159|ref|XP_003592857.1| AP2 domain-containing transcription factor [Medicago truncatula]
gi|355481905|gb|AES63108.1| AP2 domain-containing transcription factor [Medicago truncatula]
Length = 298
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD VP+ A T FP + V+ VV D +WKFR+ Y +
Sbjct: 162 FQKELTPSDVGKLNRLVVPKKHAVTYFPLV---CGNDVE-VVFYDKLMRLWKFRYCYWKS 217
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDL 207
+ ++ T GW+ FV KKL A D+IVF R + +L
Sbjct: 218 SQSYVFTRGWNRFVKDKKLKAKDTIVFYRCEPINL 252
>gi|326518670|dbj|BAJ92496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 308
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA---KDVHGEIWKFRHIY 169
F K +T SD VP+ AE FP A + +D G++W+FR+ Y
Sbjct: 158 FEKAVTPSDVGKLNRLVVPKQHAEKHFPPTTAAAAGGDGKGLLLNFEDGQGKVWRFRYSY 217
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + ++LT GWS FV +K L AGD++ F R+
Sbjct: 218 WNSSQSYVLTKGWSRFVQEKGLCAGDTVTFSRS 250
>gi|326512746|dbj|BAK03280.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 276
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 111 ASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAK-------DVHGEIW 163
A F K +T SD VP+ AE FP L T P T K D G++W
Sbjct: 92 ALFEKAVTPSDVGKLNRLVVPKQHAEKHFP-LKRT--PETTTTTGKGVLLNFEDGEGKVW 148
Query: 164 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF 199
+FR+ Y + + ++LT GWS FV +K L AGDSIVF
Sbjct: 149 RFRYSYWNSSQSYVLTKGWSRFVREKGLGAGDSIVF 184
>gi|242056491|ref|XP_002457391.1| hypothetical protein SORBIDRAFT_03g006590 [Sorghum bicolor]
gi|241929366|gb|EES02511.1| hypothetical protein SORBIDRAFT_03g006590 [Sorghum bicolor]
Length = 388
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 7/94 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDV-------HGEIWKF 165
F K +T SD VP+ AE FP K V G++W+F
Sbjct: 197 FEKAVTPSDVGKLNRLVVPKQHAEKHFPLKRAPEASAAAATTGKGVLLNFEDGEGKVWRF 256
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF 199
R+ Y + + ++LT GWS FV +K L AGD+IVF
Sbjct: 257 RYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVF 290
>gi|125568967|gb|EAZ10482.1| hypothetical protein OsJ_00314 [Oryza sativa Japonica Group]
Length = 337
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQTVVAKDV-------HGEIWK 164
F K +T SD VP+ AE FP R ++D K V G++W+
Sbjct: 154 FEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWR 213
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
FR+ Y + + ++LT GWS FV +K L AGD+IVF R+ G
Sbjct: 214 FRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYG 254
>gi|115465275|ref|NP_001056237.1| Os05g0549800 [Oryza sativa Japonica Group]
gi|122249209|sp|Q6L4H4.1|Y5498_ORYSJ RecName: Full=AP2/ERF and B3 domain-containing protein Os05g0549800
gi|47900526|gb|AAT39261.1| putative AP2 domain protein [Oryza sativa Japonica Group]
gi|113579788|dbj|BAF18151.1| Os05g0549800 [Oryza sativa Japonica Group]
Length = 394
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 23/110 (20%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA----------------- 155
F KT+T SD +P+ AE FP PP T
Sbjct: 193 FDKTVTPSDVGKLNRLVIPKQHAEKHFP---LQLPPPTTTSSVAAAADAAAGGGDCKGVL 249
Query: 156 ---KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+D G++WKFR+ Y + + ++LT GWS FV +K L AGD++ F RA
Sbjct: 250 LNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRA 299
>gi|66808613|ref|XP_638029.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
gi|74853688|sp|Q54MP8.1|Y5837_DICDI RecName: Full=Bromodomain and WD repeat-containing DDB_G0285837
gi|60466486|gb|EAL64540.1| bromodomain-containing protein [Dictyostelium discoideum AX4]
Length = 2200
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 301 FEVVYYPRASTPEFCVKASAVKAAMRVHWLC-GMRFKMAFETEDSSRISWFMGTISSVQV 359
F V Y + P++ V AS V+ +M W RF+M + W+ GTI +
Sbjct: 1349 FYTVIYHVSDIPDYLVLASKVRKSMLTDWTVPNKRFRMFYPAS-----GWYNGTIIEISD 1403
Query: 360 ADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 395
+DP+ +PNSPW ++V WD+ + RV+ W ++
Sbjct: 1404 SDPL-FPNSPWENIKVLWDD---TEEEDRVNYWEID 1435
>gi|21618252|gb|AAM67302.1| RAV-like protein [Arabidopsis thaliana]
Length = 283
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKF 165
E+ F K +T SD +P+ AE FP + T + + ++ +D G W+F
Sbjct: 2 EREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRSGNSWRF 61
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR 201
R+ Y + + +++T GWS FV KKL AGD + F R
Sbjct: 62 RYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 97
>gi|242088721|ref|XP_002440193.1| hypothetical protein SORBIDRAFT_09g027530 [Sorghum bicolor]
gi|241945478|gb|EES18623.1| hypothetical protein SORBIDRAFT_09g027530 [Sorghum bicolor]
Length = 406
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 7/121 (5%)
Query: 92 EDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFP-----RLDYTA 146
++NN + +S + + + F KT+T SD +P+ AE FP
Sbjct: 194 KNNNPAASSSSPTAVTAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAVV 253
Query: 147 DPPVQTVVA--KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD 204
+ V+ +D G++W+FR+ Y + + ++LT GWS FV +K L AGD++ F R+
Sbjct: 254 GGECKGVLLNFEDATGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAG 313
Query: 205 G 205
G
Sbjct: 314 G 314
>gi|125524359|gb|EAY72473.1| hypothetical protein OsI_00328 [Oryza sativa Indica Group]
Length = 369
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQTVVAKDV-------HGEIWK 164
F K +T SD VP+ AE FP R ++D K V G++W+
Sbjct: 183 FEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWR 242
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
FR+ Y + + ++LT GWS FV +K L AGD+IVF R+ G
Sbjct: 243 FRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYG 283
>gi|224143966|ref|XP_002325139.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222866573|gb|EEF03704.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 549
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-KDVHGEIWKFRHIYRG 171
F K LT SD +P+ A FP + +A+ ++A D ++WKFR+ Y
Sbjct: 168 FQKELTPSDVGKLNRIVIPKKYAIKYFPHISESAEEVDGVMLAFYDKSMKLWKFRYCYWK 227
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
+ + ++ T GW+ FV +KKL A D+I F + G+
Sbjct: 228 SSQSYVFTRGWNRFVKEKKLKANDTISFSLCERGE 262
>gi|115484261|ref|NP_001065792.1| Os11g0156000 [Oryza sativa Japonica Group]
gi|75270015|sp|Q53QI0.1|Y1160_ORYSJ RecName: Full=B3 domain-containing protein Os11g0156000
gi|62701645|gb|AAX92718.1| Similar to probable RAV2-like DNA binding protein [imported] -
Arabidopsis thaliana [Oryza sativa Japonica Group]
gi|108864011|gb|ABA91538.2| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113644496|dbj|BAF27637.1| Os11g0156000 [Oryza sativa Japonica Group]
gi|215697789|dbj|BAG91982.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 279
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP A + +D G W+FR+ Y +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD----GD-LCVGIRR 213
+ ++LT GWS +V +K+L AGD + F R + GD L +G RR
Sbjct: 98 SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143
>gi|218185277|gb|EEC67704.1| hypothetical protein OsI_35175 [Oryza sativa Indica Group]
Length = 363
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP A + +D G W+FR+ Y +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD----GD-LCVGIRR 213
+ ++LT GWS +V +K+L AGD + F R + GD L +G RR
Sbjct: 98 SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143
>gi|75246443|sp|Q8LNN8.1|Y1071_ORYSJ RecName: Full=Putative B3 domain-containing protein Os10g0537100
gi|21717164|gb|AAM76357.1|AC074196_15 putative DNA-binding protein [Oryza sativa Japonica Group]
gi|31433278|gb|AAP54816.1| B3 DNA binding domain containing protein [Oryza sativa Japonica
Group]
Length = 312
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA------------ 155
EK F K +T SD +P+ AE FP LD A
Sbjct: 30 EKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAAGAGGGGGGGGGGGGGKGLVLS 88
Query: 156 -KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVG 210
+D G+ W+FR+ Y + + +++T GWS FV +K+L AGD++ F R A G L +
Sbjct: 89 FEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFID 148
Query: 211 IRRAKKGIG 219
RR ++ G
Sbjct: 149 FRRRRQDAG 157
>gi|357127301|ref|XP_003565321.1| PREDICTED: AP2/ERF and B3 domain-containing protein
Os01g0141000-like [Brachypodium distachyon]
Length = 364
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP---RLDYTADPPVQTVVA-------------K 156
F K +T SD VP+ AE FP R P +T A +
Sbjct: 172 FEKAVTPSDVGKLNRLVVPKQHAEKHFPLKRRASSQLPEPEKTAGAGIGAGNKGVLLNFE 231
Query: 157 DVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVF 199
D G++W+FR+ Y + + ++LT GWS FV +K L AGD+IVF
Sbjct: 232 DGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLGAGDAIVF 274
>gi|115434448|ref|NP_001041982.1| Os01g0141000 [Oryza sativa Japonica Group]
gi|75168343|sp|Q9AWS0.1|Y1410_ORYSJ RecName: Full=AP2/ERF and B3 domain-containing protein Os01g0141000
gi|12328560|dbj|BAB21218.1| putative AP2 domain containing protein RAP2.8 [Oryza sativa
Japonica Group]
gi|113531513|dbj|BAF03896.1| Os01g0141000 [Oryza sativa Japonica Group]
gi|215694327|dbj|BAG89320.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 365
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQTVVAKDV-------HGEIWK 164
F K +T SD VP+ AE FP R ++D K V G++W+
Sbjct: 182 FEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWR 241
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
FR+ Y + + ++LT GWS FV +K L AGD+IVF R+ G
Sbjct: 242 FRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYG 282
>gi|312283445|dbj|BAJ34588.1| unnamed protein product [Thellungiella halophila]
Length = 809
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 87 NEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA 146
E+ NL+LN V F KTL+ SDA G +P+ CAE FP + +
Sbjct: 288 KEVQQISGNLNLNIV---------PLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSE 338
Query: 147 DPPVQTVVAKDVHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-D 204
P++ +DV G+ W F+ + R + G + + L+AGD++ F R
Sbjct: 339 GIPLKI---QDVRGKEWTFQFRFWPNNNSRMYVLEGVAPCIQSMMLLAGDTVTFSRVDPG 395
Query: 205 GDLCVGIRRAKKGIGGGNEYPSSGWNSN---NGSCVTGNP 241
G L +G R+A G Y + SN + S VT NP
Sbjct: 396 GKLIMGSRKAAHNTGDMQGYGLTNGTSNEDTSSSGVTENP 435
>gi|30681791|ref|NP_850559.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|117168205|gb|ABK32185.1| At3g11580 [Arabidopsis thaliana]
gi|332641548|gb|AEE75069.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 230
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 89 IDFEDNNLSLNSVGSD--SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRL---- 142
++ N LSL+ + + +++ + F K+LT SD +P+ AE FP
Sbjct: 3 VNHYHNTLSLHHHHQNDVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNN 62
Query: 143 ------DYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDS 196
D + +D G+ WKFR+ Y + + ++LT GWS +V K L AGD
Sbjct: 63 NGGSGDDVATTEKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDV 122
Query: 197 IVFLRAQDG--DLCVGIRR 213
+ F R + L +G RR
Sbjct: 123 VFFQRHRFDLHRLFIGWRR 141
>gi|62701644|gb|AAX92717.1| Similar to probable RAV2-like DNA binding protein [imported] -
Arabidopsis thaliana [Oryza sativa Japonica Group]
gi|62701878|gb|AAX92951.1| Similar to probable RAV2-like DNA binding protein [imported] -
Arabidopsis thaliana [Oryza sativa Japonica Group]
Length = 313
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP A + +D G W+FR+ Y +
Sbjct: 38 FEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTS 97
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD----GD-LCVGIRR 213
+ ++LT GWS +V +K+L AGD + F R + GD L +G RR
Sbjct: 98 SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFIGCRR 143
>gi|218187489|gb|EEC69916.1| hypothetical protein OsI_00337 [Oryza sativa Indica Group]
Length = 349
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP-RLDYTADPPVQTVVAKDV-------HGEIWK 164
F K +T SD VP+ AE FP R ++D K V G++W+
Sbjct: 166 FEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWR 225
Query: 165 FRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
FR+ Y + + ++LT GWS FV +K L AGD+IVF R+ G
Sbjct: 226 FRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYG 266
>gi|357160833|ref|XP_003578891.1| PREDICTED: B3 domain-containing protein Os11g0156000-like
[Brachypodium distachyon]
Length = 273
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 106 ESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIW 163
+ E+ F K LT SD +P+ AE FP L+ P + ++ +D G+ W
Sbjct: 29 QYEREHLFEKPLTPSDVGKLNRLVIPKQHAERYFP-LNGGDSPGEKDLLLSFEDEAGKPW 87
Query: 164 KFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ---DGD-LCVGIRR 213
+FR+ Y + + ++LT GWS +V +K L AGD + F R + GD L +G RR
Sbjct: 88 RFRYSYWTSSQSYVLTKGWSRYVKEKHLDAGDVVHFDRVRGLGTGDRLFIGCRR 141
>gi|356498733|ref|XP_003518204.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
max]
Length = 344
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFPRL---DYTADPPVQTVVAKDVHGEIWKF 165
K F K LT SD +P+ AE FP +++ + +D G+ W+F
Sbjct: 71 KEPMFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGGDSGSSECKGLLLSFEDESGKCWRF 130
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAQDGDLCVGIRRAKK 216
R+ Y + + ++LT GWS +V K+L AGD ++F RA L +G RR ++
Sbjct: 131 RYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFQRHRADAQRLFIGWRRRRQ 183
>gi|125532782|gb|EAY79347.1| hypothetical protein OsI_34476 [Oryza sativa Indica Group]
Length = 312
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA------------ 155
EK F K +T SD +P+ AE FP LD A
Sbjct: 30 EKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAAGAGGGGGGGGGGGGGKGLVLS 88
Query: 156 -KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLR----AQDGDLCVG 210
+D G+ W+FR+ Y + + +++T GWS FV +K+L AGD++ F R A G L +
Sbjct: 89 FEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVSFGRGLGDAARGRLFID 148
Query: 211 IRRAKKGIG 219
RR ++ G
Sbjct: 149 FRRRRQDAG 157
>gi|357157529|ref|XP_003577828.1| PREDICTED: B3 domain-containing protein Os11g0156000-like
[Brachypodium distachyon]
Length = 277
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRH 167
EK F K LT SD +P+ AE FP L + + D G+ W+FR+
Sbjct: 33 EKEHLFEKALTPSDVGKLNRLVIPKQHAERCFP-LGGDSGEKGLLLSFDDEAGKPWRFRY 91
Query: 168 IYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ---DGD-LCVGIRR 213
Y + + ++LT GWS +V +K+L AGD + F R + GD L +G RR
Sbjct: 92 SYWTSSQSYVLTKGWSRYVKEKQLDAGDVVHFERVRGLGTGDRLFIGCRR 141
>gi|242070051|ref|XP_002450302.1| hypothetical protein SORBIDRAFT_05g003450 [Sorghum bicolor]
gi|241936145|gb|EES09290.1| hypothetical protein SORBIDRAFT_05g003450 [Sorghum bicolor]
Length = 284
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKF 165
EK F K LT SD +P+ AE FP + D + ++ +D G+ W+F
Sbjct: 31 EKEHLFEKPLTPSDVGKLNRLVIPKQHAERYFP---LSGDSGEKGLILSFEDEAGKPWRF 87
Query: 166 RHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD---GD-LCVGIRR 213
R+ Y + + ++LT GWS +V +K+L AGD + F R + GD L + RR
Sbjct: 88 RYSYWTSSQSYVLTKGWSRYVKEKQLDAGDVVHFERMRSFGMGDRLFISYRR 139
>gi|125552982|gb|EAY98691.1| hypothetical protein OsI_20621 [Oryza sativa Indica Group]
Length = 102
Score = 56.6 bits (135), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGH--AEHSLGSVNFPSSSRIPPLIFCRVSSLKFLA 68
+LWHACAG V +P S + Y PQ H A+ G V ++ +PP + CRV ++ A
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAHLAADGGGGEVPPAGAAAVPPHVACRVVGVELRA 82
Query: 69 DSETDEVYAKIKLV 82
D+ TDEVYA++ LV
Sbjct: 83 DAATDEVYARLALV 96
>gi|297826459|ref|XP_002881112.1| high-level expression of sugar-inducible gene 2 [Arabidopsis lyrata
subsp. lyrata]
gi|297326951|gb|EFH57371.1| high-level expression of sugar-inducible gene 2 [Arabidopsis lyrata
subsp. lyrata]
Length = 798
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 88 EIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAD 147
E+ NL+LN V F KTL+ SDA G +P+ CAE FP + +
Sbjct: 284 EVQQISGNLNLNIV---------PLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEG 334
Query: 148 PPVQTVVAKDVHGEIWKFRHIY-RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DG 205
P++ +DV G+ W F+ Y R + G + + L AGD++ F R G
Sbjct: 335 IPLKI---QDVRGKEWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGG 391
Query: 206 DLCVGIRRAK-----KGIGGGNEYPSSGWNSNNGSCVTGNP--FGGFSC--FLREEENKM 256
L +G R+A +G G N + + S VT NP G SC + +E N M
Sbjct: 392 KLIMGSRKAANAGDMQGCGLTN---GTSTEDTSSSGVTENPPSINGSSCPSLIPQELNGM 448
Query: 257 ARNGNMNLNSYGSFNSSGNTRGNGGRVK 284
NL+S S + G + RVK
Sbjct: 449 PE----NLSSQKSETNGGRIGDDPARVK 472
>gi|159471017|ref|XP_001693653.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283156|gb|EDP08907.1| predicted protein [Chlamydomonas reinhardtii]
Length = 235
Score = 56.6 bits (135), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR-HIYRG 171
F K+LT SD + GG VP+ AE FPRL+ P T+ A D+ G + F+ +
Sbjct: 42 FEKSLTASDVSGGGRVVVPKSIAEQYFPRLE---APSGVTISAADLEGRAYTFKWRFWVN 98
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGDLCVGIRRAKKG 217
R L G L GD +VF + QDG L V R A K
Sbjct: 99 NSSRMYLLEGAGELHRNYGLEVGDVMVFAQKQDGSLVVAGRCANKA 144
>gi|125553212|gb|EAY98921.1| hypothetical protein OsI_20876 [Oryza sativa Indica Group]
Length = 394
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA----------------- 155
F KT+T SD +P+ AE FP PP T
Sbjct: 193 FDKTVTPSDVGKLNRLVIPKQHAEKHFP---LQLPPPTTTSSVAAAADAAAGGGECKGVL 249
Query: 156 ---KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+D G++WKFR+ Y + + ++LT GWS FV K L AGD++ F RA
Sbjct: 250 LNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKDKGLHAGDAVGFYRA 299
>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 100
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 4/59 (6%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSS-SRIPPLIFCRVSSLKFLA 68
+LWHACAG ++ +P S V YFPQGH E + +F ++ +PP +FCR+ +K A
Sbjct: 45 ELWHACAGPLISLPKRGSLVLYFPQGHLEQ---APDFSAAIYGLPPHVFCRILDVKLHA 100
>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
Length = 180
Score = 56.2 bits (134), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 11 QLWHACAGSMVQIPPLNSTVFYFPQGHAEHSLGSVNFPSSSRI-----PPLIFCRVSSLK 65
+LW ACAG +V++P VFYFPQGH E S N + +I PP I CRV +++
Sbjct: 23 ELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVVNIR 82
Query: 66 FL 67
L
Sbjct: 83 LL 84
>gi|449497229|ref|XP_004160347.1| PREDICTED: B3 domain-containing transcription repressor VAL2-like
[Cucumis sativus]
Length = 594
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 8/183 (4%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + S S F K L+ SDA G VP+ CAE FP + P++ +D
Sbjct: 301 LQQISGASNSTVVPLFEKMLSASDAGRIGRLVVPKACAEAYFPPISQPEGLPIRI---QD 357
Query: 158 VHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAK 215
V G+ W F+ + R + G + + +L AGD++ F R +G L +G R+A
Sbjct: 358 VKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKAS 417
Query: 216 KGIGGGNEYPSSGWNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMN--LNSY-GSFNS 272
+ +PS+ S + S + F + GNM+ LN G FN
Sbjct: 418 SSSIMQDSHPSALSTSGHSSEFFSSVFENLPLLSGHSSLLQSLKGNMDPQLNLLPGYFNQ 477
Query: 273 SGN 275
GN
Sbjct: 478 PGN 480
>gi|357114324|ref|XP_003558950.1| PREDICTED: B3 domain-containing protein Os03g0120900-like
[Brachypodium distachyon]
Length = 311
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 13/141 (9%)
Query: 85 PANEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY 144
PA E + +S + EK F K +T SD +P+ AE FP LD
Sbjct: 9 PAAGRTSEHDGGGPSSTTDQVQVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDS 67
Query: 145 TADPPVQTVVA-------KDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSI 197
T T +D G+ W+FR+ Y + + +++T GWS FV +K+L AGD++
Sbjct: 68 TTAAAASTGGGGGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTV 127
Query: 198 VFLR-----AQDGDLCVGIRR 213
F R A G L + RR
Sbjct: 128 SFGRGVGSEAAKGRLFIDWRR 148
>gi|218197101|gb|EEC79528.1| hypothetical protein OsI_20622 [Oryza sativa Indica Group]
Length = 380
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 339 FETEDSSRISWFMGTISSVQVADPISWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELV- 397
+E + R+ M IS V DPI WP S W+ L V WD+ + RVSPW +E V
Sbjct: 1 MRSEFAMRVKMLMRGISEV---DPIKWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVG 57
Query: 398 SNMPVIHLSPFSPARKKLRLPQ-QLDFPF 425
++ V H R KL PQ LD PF
Sbjct: 58 GSVSVTHSLSSGSKRTKLHFPQGSLDTPF 86
>gi|1946371|gb|AAB63089.1| putative VP1/ABI3 family regulatory protein [Arabidopsis thaliana]
Length = 780
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 80/189 (42%), Gaps = 26/189 (13%)
Query: 88 EIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAD 147
E+ NL+LN V F KTL+ SDA G +P+ CAE FP + +
Sbjct: 269 EVQQISGNLNLNIV---------PLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEG 319
Query: 148 PPVQTVVAKDVHGEIWKFRHIY-RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DG 205
P++ +DV G W F+ Y R + G + + L AGD++ F R G
Sbjct: 320 IPLKI---QDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGG 376
Query: 206 DLCVGIRRAK-----KGIGGGNEYPSSGWNSNNGSCVTGNP--FGGFSC--FLREEENKM 256
L +G R+A +G G N + + S VT NP G SC + +E N M
Sbjct: 377 KLIMGSRKAANAGDMQGCGLTN---GTSTEDTSSSGVTENPPSINGSSCISLIPKELNGM 433
Query: 257 ARNGNMNLN 265
N N N
Sbjct: 434 PENLNSETN 442
>gi|30684597|ref|NP_850146.1| B3 domain-containing transcription repressor VAL1 [Arabidopsis
thaliana]
gi|75331397|sp|Q8W4L5.1|VAL1_ARATH RecName: Full=B3 domain-containing transcription repressor VAL1;
AltName: Full=Protein HIGH-LEVEL EXPRESSION OF
SUGAR-INDUCIBLE 2; AltName: Full=Protein VP1/ABI3-LIKE 1
gi|17064832|gb|AAL32570.1| putative VP1/ABI3 family regulatory protein [Arabidopsis thaliana]
gi|60677677|dbj|BAD90970.1| transcription factor B3-EAR motif [Arabidopsis thaliana]
gi|330253298|gb|AEC08392.1| B3 domain-containing transcription repressor VAL1 [Arabidopsis
thaliana]
Length = 790
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 87 NEIDFEDNNLSLNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTA 146
E+ NL+LN V F KTL+ SDA G +P+ CAE FP + +
Sbjct: 278 KEVQQISGNLNLNIV---------PLFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSE 328
Query: 147 DPPVQTVVAKDVHGEIWKFRHIY-RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-D 204
P++ +DV G W F+ Y R + G + + L AGD++ F R
Sbjct: 329 GIPLKI---QDVRGREWTFQFRYWPNNNSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPG 385
Query: 205 GDLCVGIRRAK-----KGIGGGNEYPSSGWNSNNGSCVTGNP--FGGFSC--FLREEENK 255
G L +G R+A +G G N + + S VT NP G SC + +E N
Sbjct: 386 GKLIMGSRKAANAGDMQGCGLTN---GTSTEDTSSSGVTENPPSINGSSCISLIPKELNG 442
Query: 256 MARNGNMNLN 265
M N N N
Sbjct: 443 MPENLNSETN 452
>gi|374259661|gb|AEZ02303.1| RAV1 [Castanea sativa]
Length = 383
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 4/98 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQT----VVAKDVHGEIWKFRHI 168
F K +T SD +P+ AE FP + ++ + + +DV G++W+FR+
Sbjct: 209 FEKAVTPSDVGKLNRLVIPKQHAEKHFPLQNSGSNSTTSSKGLLLNFEDVGGKVWRFRYS 268
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD 206
Y + + ++LT GWS FV +K L AGD + F R+ D
Sbjct: 269 YWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGPD 306
>gi|302144200|emb|CBI23327.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 14/186 (7%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + DS S F K L+ SDA G +P+ CAE FP + P++ AK
Sbjct: 315 LQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPAISQPEGLPLKVQDAKG 374
Query: 158 VHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAKK 216
H I++FR R ++L G + + +L AGD++ F R + +G L +G R+A
Sbjct: 375 -HEWIFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKAST 432
Query: 217 GIGG--GNEYPSSG-WNSNNGSCVTGNPFGGFSCFLREEENKMARNGNMNLNSYGSFNSS 273
GNE +G S +G +P +S K+ ++G + + G+ +S
Sbjct: 433 APSSDQGNETIKTGNGGSTHGDADLADPASAWS--------KVDKSGYIAKEALGAKSSI 484
Query: 274 GNTRGN 279
R N
Sbjct: 485 PRKRKN 490
>gi|242080967|ref|XP_002445252.1| hypothetical protein SORBIDRAFT_07g006880 [Sorghum bicolor]
gi|241941602|gb|EES14747.1| hypothetical protein SORBIDRAFT_07g006880 [Sorghum bicolor]
Length = 279
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYT--ADPPVQTVVAKDVH-GEIWKFRHIY 169
F+K LT SD +PR CAE FP++ T A+ + +D+ G IW FR
Sbjct: 79 FSKILTASDVGKLNRLLIPRQCAEECFPKISKTKSAEDDEDFLNFEDMSTGLIWCFRFCL 138
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ ++LT GW F+ +K L GD + F R
Sbjct: 139 WNNSKTYVLTKGWHFFIKEKNLKKGDVLSFYRG 171
>gi|224091110|ref|XP_002309182.1| predicted protein [Populus trichocarpa]
gi|222855158|gb|EEE92705.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + D S F K L+ SDA G +P+ CAE FP + P++ +D
Sbjct: 265 LQQISGDPNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRI---QD 321
Query: 158 VHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAK 215
V G+ W F+ + R + G + + KL AGD++ F R +G L +G R+A
Sbjct: 322 VKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMKLQAGDTVTFSRMDPEGKLVMGFRKAS 381
Query: 216 KGIG 219
I
Sbjct: 382 NSIA 385
>gi|359495507|ref|XP_002270901.2| PREDICTED: B3 domain-containing protein Os07g0563300-like, partial
[Vitis vinifera]
Length = 564
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 7/162 (4%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + DS S F K L+ SDA G +P+ CAE FP + P++ AK
Sbjct: 304 LQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPAISQPEGLPLKVQDAKG 363
Query: 158 VHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAKK 216
H I++FR R ++L G + + +L AGD++ F R + +G L +G R+A
Sbjct: 364 -HEWIFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTFSRLEPEGKLVMGFRKAST 421
Query: 217 GIGGGN---EYPSSGWNSNNGS-CVTGNPFGGFSCFLREEEN 254
P+S W+ + S + G S R+ +N
Sbjct: 422 APSSDQADLADPASAWSKVDKSGYIAKEALGAKSSIPRKRKN 463
>gi|239983849|sp|Q5VS55.2|Y6078_ORYSJ RecName: Full=B3 domain-containing protein Os06g0107800
Length = 199
Score = 55.8 bits (133), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-KDVHG--EIWKFRHIY 169
F K +T SD VP++ AE FP P TV+ +D G W+FR+ Y
Sbjct: 37 FEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSY 96
Query: 170 RGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
+ + +++T GWS +V K+L AGD++ F RA
Sbjct: 97 WSSSQSYVITKGWSRYVRDKRLAAGDTVSFCRA 129
>gi|255575574|ref|XP_002528687.1| transcription factor, putative [Ricinus communis]
gi|223531859|gb|EEF33676.1| transcription factor, putative [Ricinus communis]
Length = 891
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 5/124 (4%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + +DS S F K L+ SDA G +P+ CAE FP + P++ +D
Sbjct: 321 LQQISADSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRI---QD 377
Query: 158 VHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAK 215
V G+ W F+ + R + G + + +L AGD++ F R +G L +G R+A
Sbjct: 378 VKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLVMGFRKAS 437
Query: 216 KGIG 219
+
Sbjct: 438 NSMA 441
>gi|356549411|ref|XP_003543087.1| PREDICTED: B3 domain-containing protein Os07g0563300-like isoform 1
[Glycine max]
Length = 889
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR-HIYRG 171
F KTL+ SDA G +P+ CAET FP + P++ + D G+ W F+ +
Sbjct: 345 FQKTLSASDAGRIGRLVLPKKCAETYFPPISQPEGLPLKIL---DAKGKEWIFQFRFWPN 401
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRA 214
R + G + + +L AGD++ F R + +G L +G R+A
Sbjct: 402 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRLEPEGRLVMGFRKA 445
>gi|225451964|ref|XP_002279732.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Vitis vinifera]
Length = 284
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 7/126 (5%)
Query: 87 NEIDFEDNNLSLNSVGSDSESEKPAS------FAKTLTQSDANNGGGFSVPRYCAETIFP 140
+E++ +N G+D KP+ F K +T SD +P+ AE P
Sbjct: 122 DELEQSAHNYGSKESGADVMESKPSVCERVQLFDKAVTPSDVGKLNRMVIPKQHAEKHLP 181
Query: 141 RLDYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL 200
L + + +D G+IW+FR+ + + + ++LT GW FV +K L AGD + F
Sbjct: 182 -LQLASSSKGGLLNFEDNGGKIWRFRYSFWNSSQSYVLTKGWRRFVKEKNLKAGDIVSFH 240
Query: 201 RAQDGD 206
R+ D
Sbjct: 241 RSTGSD 246
>gi|75168345|sp|Q9AWS7.1|Y1407_ORYSJ RecName: Full=Putative AP2/ERF and B3 domain-containing protein
Os01g0140700
gi|12328553|dbj|BAB21211.1| putative AP2 domain containing protein RAP2.8 [Oryza sativa
Japonica Group]
Length = 317
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP--RLDYTADPPVQTVVA--KDVHGEIWKFRHI 168
F K +T SD VP+ AE FP +++D + V+ +D G++W+FR+
Sbjct: 178 FEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYS 237
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + ++LT GWS FV +K L GD++ F R+
Sbjct: 238 YWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRS 271
>gi|125524357|gb|EAY72471.1| hypothetical protein OsI_00326 [Oryza sativa Indica Group]
Length = 316
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFP--RLDYTADPPVQTVVA--KDVHGEIWKFRHI 168
F K +T SD VP+ AE FP +++D + V+ +D G++W+FR+
Sbjct: 177 FEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYS 236
Query: 169 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRA 202
Y + + ++LT GWS FV +K L GD++ F R+
Sbjct: 237 YWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSRS 270
>gi|326526987|dbj|BAK00882.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 380
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA--KDVHGEIWKFRHIYR 170
F KT+T SD +P+ AE FP + ++ +D G++W+FR+ Y
Sbjct: 203 FDKTVTPSDVGKLNRLVIPKQNAEKHFPLQLPAGGGESKGLLLNFEDDAGKVWRFRYSYW 262
Query: 171 GTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDG 205
+ + ++LT GWS FV +K L AGD + F R+ G
Sbjct: 263 NSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRSAAG 297
>gi|218186464|gb|EEC68891.1| hypothetical protein OsI_37536 [Oryza sativa Indica Group]
Length = 273
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP + + +D G+ W+FR+ Y +
Sbjct: 36 FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGGDSGEKGLLLSFEDESGKPWRFRYSYWTS 95
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD----GDLCVGIRR 213
+ ++LT GWS +V +K+L AGD + F R + L +G RR
Sbjct: 96 SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGLGAADRLFIGCRR 140
>gi|30681787|ref|NP_187765.2| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|75159007|sp|Q8RYD3.1|Y3158_ARATH RecName: Full=B3 domain-containing protein At3g11580; AltName:
Full=Protein AUXIN RESPONSE FACTOR 32
gi|20152530|emb|CAD29644.1| putative auxin response factor 32 [Arabidopsis thaliana]
gi|51968704|dbj|BAD43044.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332641547|gb|AEE75068.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 267
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 14/139 (10%)
Query: 89 IDFEDNNLSLNSVGSD--SESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRL---- 142
++ N LSL+ + + +++ + F K+LT SD +P+ AE FP
Sbjct: 3 VNHYHNTLSLHHHHQNDVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNN 62
Query: 143 ------DYTADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDS 196
D + +D G+ WKFR+ Y + + ++LT GWS +V K L AGD
Sbjct: 63 NGGSGDDVATTEKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDV 122
Query: 197 IVFLRAQDG--DLCVGIRR 213
+ F R + L +G RR
Sbjct: 123 VFFQRHRFDLHRLFIGWRR 141
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 308 RASTPEFCVKASAVKAAMRVHWLCGMRFKMAFETEDSSR----ISWFMGTISSVQVADPI 363
RAS+ EF + + ++ + GMRFKM FETED++ I + G I+ V DP
Sbjct: 27 RASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSELDPA 86
Query: 364 SWPNSPWRLLQVTW 377
WP S W+ L V+W
Sbjct: 87 RWPGSKWKCLLVSW 100
>gi|449440229|ref|XP_004137887.1| PREDICTED: B3 domain-containing protein Os07g0679700-like [Cucumis
sativus]
Length = 848
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR-HIYRG 171
F K L+ SDA G VP+ CAE FP + P++ +DV G+ W F+ +
Sbjct: 316 FEKMLSASDAGRIGRLVVPKACAEAYFPPISQPEGLPIRI---QDVKGKEWVFQFRFWPN 372
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAKKGIGGGNEYPSSGWN 230
R + G + + +L AGD++ F R +G L +G R+A + +PS+
Sbjct: 373 NNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKASSSSIMQDSHPSALST 432
Query: 231 SNNGSCVTGNPFGGFSCFLREEENKMARNGNMN--LNSY-GSFNSSGN 275
S + S + F + GNM+ LN G FN GN
Sbjct: 433 SGHSSEFFSSVFENLPLLSGHSSLLQSLKGNMDPQLNLLPGYFNQPGN 480
>gi|302799992|ref|XP_002981754.1| hypothetical protein SELMODRAFT_451631 [Selaginella moellendorffii]
gi|300150586|gb|EFJ17236.1| hypothetical protein SELMODRAFT_451631 [Selaginella moellendorffii]
Length = 855
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFR-HIYRG 171
F K L+ SDA G +P+ CAE FP + P++ D++G W+F+ +
Sbjct: 302 FEKVLSASDAGRIGRLVLPKACAEAYFPTISQAEGLPLRI---NDINGREWQFQFRFWPN 358
Query: 172 TPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRAKKGIGGGNEYPSS 227
R + G + + L AGD++ F R + +G L +G R+A+ G EYP +
Sbjct: 359 NNSRMYVLEGVTPCIQAMHLQAGDTVTFSRLEPEGKLIMGYRKAQD--SGDGEYPGA 413
>gi|413955546|gb|AFW88195.1| hypothetical protein ZEAMMB73_856314 [Zea mays]
Length = 277
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 108 EKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVA-----------K 156
EK F K +T SD +P+ AE FP LD ++ A +
Sbjct: 27 EKEHMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASSAAAAAAAAAAGGGKGLVLSFE 86
Query: 157 DVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIV 198
D G+ W+FR+ Y + + +++T GWS FV +K+L AGD+++
Sbjct: 87 DRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVL 128
>gi|145357701|ref|NP_196243.2| AP2/B3 domain-containing protein [Arabidopsis thaliana]
gi|332003607|gb|AED90990.1| AP2/B3 domain-containing protein [Arabidopsis thaliana]
Length = 267
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 109 KPASFAKTLTQSDANNGGGFSVPRYCAETIFP---------RLDYTADPPVQTVVAKDVH 159
K + F K+LT SD +P+ AE FP D ++ + +D
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 160 GEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQDGD--LCVGIRRAKKG 217
G+ W+FR+ Y + + ++LT GWS FV K+L GD + F R + L +G RR +G
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQG 161
>gi|125578564|gb|EAZ19710.1| hypothetical protein OsJ_35286 [Oryza sativa Japonica Group]
Length = 173
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 113 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGEIWKFRHIYRGT 172
F K LT SD +P+ AE FP + + +D G+ W+FR+ Y +
Sbjct: 36 FEKPLTPSDVGKLNRLVIPKQHAERYFPLGGGDSGEKGLLLSFEDESGKPWRFRYSYWTS 95
Query: 173 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQD----GDLCVGIRR 213
+ ++LT GWS +V +K+L AGD + F R + L +G RR
Sbjct: 96 SQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGLGAADRLFIGCRR 140
>gi|357470009|ref|XP_003605289.1| B3 domain-containing protein [Medicago truncatula]
gi|355506344|gb|AES87486.1| B3 domain-containing protein [Medicago truncatula]
Length = 900
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Query: 98 LNSVGSDSESEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKD 157
L + DS S F K L+ SDA G +P+ CAE FP + P++ +D
Sbjct: 300 LQQISGDSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRI---QD 356
Query: 158 VHGEIWKFR-HIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAQ-DGDLCVGIRRA 214
V G+ W F+ + R + G + + +L AGD++ F R +G L +G R+A
Sbjct: 357 VKGKEWMFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLIMGFRKA 415
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,803,774,046
Number of Sequences: 23463169
Number of extensions: 519945605
Number of successful extensions: 1261058
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 552
Number of HSP's that attempted gapping in prelim test: 1254526
Number of HSP's gapped (non-prelim): 3496
length of query: 724
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 574
effective length of database: 8,839,720,017
effective search space: 5073999289758
effective search space used: 5073999289758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)