Your job contains 1 sequence.
>004908
MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS
SSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRG
PSMPMRSIGAHGGHETLLSGPDFKDFHSMQDPNAKNLDPNWRRPSPSPGIRTSPTQGIRQ
PLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITG
GPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGGTPVCRARCVPFGK
GIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASYTEFLRYLGSKNRA
GVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKLPQQAMVPPQTVDKQNIPPPHA
EYGLTRPKEEHVLPVDYNRFSHDDSKVQSKMHFPHASEPLIAHSSSMDYGSNNAAAISQA
GVKLTPELIATLTSLIPATKSAEVAPGSSSARPLLAEPHVQSIEQLGNHYNPQAQSLTHH
YASMSSTPSHSAQMLLGNNQLQESTASLSQQGMVYSRPLPNFSIAPQAAPVAVSPPVHQQ
YQFAAPSNSQKGYGMMQGTEASTLYGSSVFQQPNNPTAVSNQVNLSQPQNVMTVSVDKVN
LEHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAANLLLQIQQQQQTNSPAGRGT
GNQQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 004908
(724 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2058203 - symbol:FPA species:3702 "Arabidopsis... 773 5.0e-108 2
TAIR|locus:2135605 - symbol:AT4G12640 species:3702 "Arabi... 376 8.5e-47 3
>TAIR|locus:2058203 [details] [associations]
symbol:FPA species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=IMP] [GO:0000785 "chromatin"
evidence=IDA] [GO:0009553 "embryo sac development" evidence=IGI]
[GO:0009790 "embryo development" evidence=IGI] [GO:0031048
"chromatin silencing by small RNA" evidence=IMP] [GO:0006378 "mRNA
polyadenylation" evidence=IDA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0006378 GO:GO:0000785
GO:GO:0006351 GO:GO:0003723 GO:GO:0009790 GO:GO:0009911
GO:GO:0031048 GO:GO:0010228 GO:GO:0009908 GO:GO:0009553
EMBL:AC002335 InterPro:IPR012921 Pfam:PF07744 HSSP:Q9V535
EMBL:AY849993 EMBL:AY094463 EMBL:BT003029 EMBL:AK317032
EMBL:AK318833 IPI:IPI00545884 IPI:IPI00852356 IPI:IPI00955350
RefSeq:NP_001078046.1 RefSeq:NP_001078047.1 RefSeq:NP_001078048.1
RefSeq:NP_181869.2 UniGene:At.12188 UniGene:At.36898
ProteinModelPortal:Q8LPQ9 SMR:Q8LPQ9 IntAct:Q8LPQ9 STRING:Q8LPQ9
PaxDb:Q8LPQ9 PRIDE:Q8LPQ9 EnsemblPlants:AT2G43410.2
EnsemblPlants:AT2G43410.3 EnsemblPlants:AT2G43410.4 GeneID:818942
KEGG:ath:AT2G43410 TAIR:At2g43410 eggNOG:NOG250829
HOGENOM:HOG000015139 InParanoid:A8MQX1 OMA:TSAYIDF PhylomeDB:Q8LPQ9
ProtClustDB:CLSN2697851 Genevestigator:Q8LPQ9 PROSITE:PS50917
Uniprot:Q8LPQ9
Length = 901
Score = 773 (277.2 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 213/460 (46%), Positives = 261/460 (56%)
Query: 270 RNPIDSDFIWRGIIAKGGTPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAI 329
R P DSD IWRG+IAKGGTPVC ARCVP GKGIE++LPEVVNCSART L+MLAKHYA AI
Sbjct: 432 RGPPDSDHIWRGMIAKGGTPVCCARCVPMGKGIETKLPEVVNCSARTDLNMLAKHYAVAI 491
Query: 330 GFDIVFFLPDSEDDFASYTEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGP 389
G +IVFF+PD E+DFASYTEFLRYL SK+RAGVAK DDGTTLFLVPPSDFL+ VL+V
Sbjct: 492 GCEIVFFVPDREEDFASYTEFLRYLSSKDRAGVAKLDDGTTLFLVPPSDFLTDVLQVTRQ 551
Query: 390 ERLYGVVLKLPQQAMVPPQTVDKQNIPPPHAEYGLTRPKEEHVLPVDYNRFSHDDSKVQ- 448
ERLYGVVLKLP A VP +Q Y + + ++ ++ + ++ ++
Sbjct: 552 ERLYGVVLKLPPPA-VPVTASYRQESQSNPLHY-MDQARDSPA-NASHSLYPPRENYIRG 608
Query: 449 SKMHFPHASEPLIAHSSSMDYGSNNAAAISQAGVKLTPELIATLTSLIPATKSAEVAPGS 508
+ H AS+P ++ + NNAA QAGV LTPEL+ATL S++PAT S AP
Sbjct: 609 APEHLTAASKPSVSEPLRIP---NNAAP--QAGVSLTPELLATLASILPAT-SQPAAP-- 660
Query: 509 SSARPLLAEPHVQSIEQLGNH-YNPQAQSL-------THHYASMSSTPSHSAQMLLGNNQ 560
S +P+ V S N YN +A S T H AS S + Q Q
Sbjct: 661 ESHQPMSGPSTVVSTAHQSNGLYNGEAPSQAWKRGPQTVHDASNQSFQQYGNQYTPAG-Q 719
Query: 561 L-----QESTASLSQQ---GMVYSR-PLPNFSIXXXXXXXXXXXXXXXXYQFA-APSNSQ 610
L + AS + GMV+ + S+ + SN
Sbjct: 720 LPPPPSRYPPASNNPNYTSGMVHGNMQYQSQSVNMPQLSPLPNMPHNNYSMYTQGSSNHP 779
Query: 611 KGYGMMQG--TEASTL---YGS-SVFQQPNNPTAVSNQ---VNLSQPQNVMTVSVDKVNL 661
M+Q EAS YG +QQ N +NQ +N SQ Q M DK NL
Sbjct: 780 VSQPMVQQYQPEASMPNQNYGPIPSYQQANFHGVTTNQAQNLNPSQFQAAMQPPADKANL 839
Query: 662 EHPNHVQQLQSVLSGAGQGTSDGEVDKNQRYQSTLQFAAN 701
E N +LQ ++SG GQGT+DGEVDKNQRYQSTLQFAAN
Sbjct: 840 EPQNQALRLQPMISGDGQGTTDGEVDKNQRYQSTLQFAAN 879
Score = 315 (115.9 bits), Expect = 5.0e-108, Sum P(2) = 5.0e-108
Identities = 80/180 (44%), Positives = 102/180 (56%)
Query: 2 DEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSS 61
DEQ+LHNAMILFGEIER+KSYPSRN++ VEFRS +EAR+ KEGLQGRLFN+PRI IM+S+
Sbjct: 221 DEQILHNAMILFGEIERVKSYPSRNFALVEFRSAEEARQCKEGLQGRLFNNPRIKIMYSN 280
Query: 62 SELAPGKDYPGSYSGTKGPRSEMFFGDQIRPSQLDMLGPNQSMQP---NNFAGH--LQPA 116
EL P +D YSG K R++MF D S G SM+P N + +
Sbjct: 281 DELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSPHSTGIPGSMRPLRGTNERSYNGAEYN 340
Query: 117 DIRGPSMPMRSIGAHG-GHETLLSGPDF--KDFHSMQDPNAKNLDPNWRRPSPSPGIRTS 173
D+ G R A+G G +GP + P N D +W P+ +R S
Sbjct: 341 DVVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGTRRPMRSNPD-SWEGYDPAQLVRES 399
Score = 168 (64.2 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 55/177 (31%), Positives = 81/177 (45%)
Query: 80 PRSE-MFFGDQIRPSQLDMLGPNQSMQPNNFAGHLQPADIRGPSMPMRSIGAHGGHETLL 138
PR + M+ D++ P Q D + + + P+ + P S G G L
Sbjct: 272 PRIKIMYSNDELPPEQDDTSFYSGMKRSRTDMFNNDPSFVSSP----HSTGIPGSMRPL- 326
Query: 139 SGPDFKDFHSMQDPNAKNLDPNWRRPS-------PSP---GIRTSPTQGIRQPLNHAPGS 188
G + + ++ + + +PNWRRPS PSP GI SP QG R+P+ P S
Sbjct: 327 RGTNERSYNGAEYNDVVGKEPNWRRPSANGTGILPSPTGPGILPSPAQGTRRPMRSNPDS 386
Query: 189 WDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGLVLDQSYGLGSITGGPASG 245
W+ YD Q R+SKR R DGS +D F +D+ +S+G GS+ P G
Sbjct: 387 WEGYDPAQLVRESKRTRRDGS--VDG--FTPMGVDE------RSFGRGSVAARPIRG 433
Score = 110 (43.8 bits), Expect = 1.2e-102, Sum P(3) = 1.2e-102
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 13 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKDYPG 72
+G+I+RI Y SR ++F+ +R V+EA AKE LQG N +I I ++ P K
Sbjct: 41 YGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGANLNGSQIKIEYAR----PAKPCKS 96
Query: 73 SYSGTKGP 80
+ G GP
Sbjct: 97 LWVGGIGP 104
Score = 89 (36.4 bits), Expect = 3.5e-84, Sum P(2) = 3.5e-84
Identities = 32/107 (29%), Positives = 55/107 (51%)
Query: 13 FGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSSELAPGKD-YP 71
FG+IE + R +F+++ +D+A +AK + G+ + + F S+ AP K+ +
Sbjct: 118 FGKIEDFRFLRERKTAFIDYYEMDDALQAKS-MNGKPMGGSFLRVDFLRSQ-APKKEQWA 175
Query: 72 GSYSGTKG--------PRS-EMFFGDQIRPSQLDMLG-PNQSMQPNN 108
GSY G P S E F GD ++PS++ +G P + Q N+
Sbjct: 176 GSYDNRNGNMNHKPQYPHSYEDFKGD-VQPSKVLWIGFPPTATQCND 221
Score = 38 (18.4 bits), Expect = 5.3e-89, Sum P(3) = 5.3e-89
Identities = 12/44 (27%), Positives = 20/44 (45%)
Query: 229 LDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGF-GRN 271
+D + S+ G P G+F+ V +P + AG + RN
Sbjct: 140 MDDALQAKSMNGKPMGGSFLRVDFLRSQAPKKEQ-WAGSYDNRN 182
>TAIR|locus:2135605 [details] [associations]
symbol:AT4G12640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:CP002687 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012921 Pfam:PF07744 IPI:IPI00546459 RefSeq:NP_193001.2
UniGene:At.46444 ProteinModelPortal:F4JRD9 SMR:F4JRD9 PRIDE:F4JRD9
EnsemblPlants:AT4G12640.1 GeneID:826877 KEGG:ath:AT4G12640
OMA:ERNYEAG Uniprot:F4JRD9
Length = 823
Score = 376 (137.4 bits), Expect = 8.5e-47, Sum P(3) = 8.5e-47
Identities = 92/232 (39%), Positives = 126/232 (54%)
Query: 168 PGIRTSPTQGIRQPLNHAPGSWDVYDANQFQRDSKRLRVDGSMPIDDATFPSRKIDDHGL 227
PG + S + R+P + A + DA + ++ +LR + ++ R D L
Sbjct: 376 PGHQLSGIEQERRPFSRASADFSPKDAFERNYEAGQLRYNQTVE-QPLNLAIRNGDKSSL 434
Query: 228 VLDQSYGLGSITGGPASGAFVNVQGRNRLSPVASKVTAGGFGRNPIDSDFIWRGIIAKGG 287
+G G P V R R +P ++ P D+ W G IAKGG
Sbjct: 435 REPHEELMG---GYPLPSV---VPERKRYTPELNR---------PSLKDWNWEGTIAKGG 479
Query: 288 TPVCRARCVPFGKGIESELPEVVNCSARTGLDMLAKHYAEAIGFDIVFFLPDSEDDFASY 347
P+CRA+C P GK ++ LPE ++C+ARTGLDMLAKHY ++ +VFF+P S+ D Y
Sbjct: 480 NPICRAKCFPVGKVMDMMLPEFLDCTARTGLDMLAKHYYQSSKAWVVFFVPGSDADIVFY 539
Query: 348 TEFLRYLGSKNRAGVAKFDDGTTLFLVPPSDFLSKVLKVVGPERLYGVVLKL 399
EF+ YL K RA V+K DD TTLFLVPPSDF KVLKV G + GV+L+L
Sbjct: 540 DEFMHYLEEKQRAAVSKLDDTTTLFLVPPSDFSEKVLKVPGKLSISGVILRL 591
Score = 172 (65.6 bits), Expect = 8.5e-47, Sum P(3) = 8.5e-47
Identities = 42/124 (33%), Positives = 67/124 (54%)
Query: 1 MDEQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFS 60
+D+ +L N FGEI ++ +P R+Y+FV+FR++ A +AKE LQG+LF +PR+ I F+
Sbjct: 163 VDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKESLQGKLFGNPRVHICFA 222
Query: 61 SSELAPGKDYPGSYSGTKGPRSEMFFGDQIRPS--QLDMLGPNQS-MQPNNFAGHLQPAD 117
SE P S +GP G + P +D LG ++ +Q N+ +
Sbjct: 223 KSE-------PSSSGSGRGPS-----GRSLSPPYRSVDRLGSSEGYLQDRNYGSISRIPS 270
Query: 118 IRGP 121
+R P
Sbjct: 271 VREP 274
Score = 91 (37.1 bits), Expect = 2.3e-38, Sum P(3) = 2.3e-38
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 3 EQMLHNAMILFGEIERIKSYPSRNYSFVEFRSVDEARRAKEGLQGRLFNDPRITIMFSSS 62
E+ L + + FGE+E + P R+Y+FV F ++A A E LQG + + I F+ +
Sbjct: 36 ERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESLQGFPLSGNPLRIEFAKA 95
Query: 63 E 63
E
Sbjct: 96 E 96
Score = 62 (26.9 bits), Expect = 8.5e-47, Sum P(3) = 8.5e-47
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 633 PNNPT--AVSNQVNLSQPQNVMTVSVDKVNLEHPNHVQQLQSVLSGAGQGTSDGEVDKNQ 690
PN P A + + S Q+ T S+ + L P + Q +Q + S Q + E + +
Sbjct: 746 PNQPERYAPEGRASFSHLQHAQTPSIPQ--LVTPQN-QNVQ-IQSSNSQQQEETEANPQK 801
Query: 691 RYQSTLQFAA 700
R Q+TLQ AA
Sbjct: 802 RLQATLQLAA 811
Score = 43 (20.2 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 7/23 (30%), Positives = 14/23 (60%)
Query: 189 WDVYDANQFQRDSKRLRVDGSMP 211
WD+ + + + ++ KRL+ S P
Sbjct: 349 WDLPEDDYYYQEIKRLKTRSSQP 371
Score = 37 (18.1 bits), Expect = 3.4e-10, Sum P(4) = 3.4e-10
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 236 GSITGGPASGAFVNVQGRNRL-SPVASKVTAG 266
G + ASGAF +V G R+ P A +AG
Sbjct: 618 GETSYSEASGAFPDV-GNPRIPGPTAFLRSAG 648
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.386 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 724 698 0.00082 121 3 11 23 0.45 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 611 (65 KB)
Total size of DFA: 340 KB (2169 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 67.05u 0.11s 67.16t Elapsed: 00:00:17
Total cpu time: 67.05u 0.11s 67.16t Elapsed: 00:00:17
Start: Fri May 10 13:01:05 2013 End: Fri May 10 13:01:22 2013