BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004913
(724 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P9L6|KIF15_MOUSE Kinesin-like protein KIF15 OS=Mus musculus GN=Kif15 PE=1 SV=1
Length = 1387
Score = 37.7 bits (86), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 109/204 (53%), Gaps = 19/204 (9%)
Query: 391 PLDQRHKLSRVLLTMERRL---VTAKTDMEDLITRLNQEMTVKDYLMTKVKDLEVELETT 447
P Q H L+++L T E+ + +KT ++ L+T+LN++ VK+ + ++KD E+E
Sbjct: 1146 PHFQAH-LAKLLETQEQEIEDGRASKTSLQHLVTKLNEDREVKNAEILRMKDQLCEMENL 1204
Query: 448 KQKSKETLQQAILSERERLTQMQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKD 507
+ +S++ L E+ L Q Q D + +Q+S + S+Q N H E ++E K+
Sbjct: 1205 RLESQQ------LREKNWLLQRQLDDVKRQQESGDQSHP-DSQQLKNEHEEIIKERLAKN 1257
Query: 508 KNVLQELDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQELSQMLNEK 567
K +++E+ K LE + L +K KA + +E++ R+ + QE Q+ +
Sbjct: 1258 K-LIEEMLKMKTNLEEVQSA---LHSKEKA-CHRMSEEIERTRTLESRAFQEKEQL---R 1309
Query: 568 SKTEELLQQERQTHNHMKTVREKL 591
SK EE+ ++ +T M+ ++++L
Sbjct: 1310 SKLEEMYEERERTFLEMEMLKKQL 1333
>sp|Q28641|MYH4_RABIT Myosin-4 OS=Oryctolagus cuniculus GN=MYH4 PE=2 SV=1
Length = 1938
Score = 37.7 bits (86), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 50/253 (19%)
Query: 417 EDLITRLNQEMTVKDYLMTKVKDLEVELETTKQKSKETLQQAILSERER----------- 465
EDL +L + L ++++L LE T ++S++ +Q +L ER
Sbjct: 1668 EDLKEQLAMVERRANLLQAEIEELRATLEQT-ERSRKVAEQELLDASERVQLLHTQNTSL 1726
Query: 466 ----------LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME 501
++Q+Q +ME++ Q++ E K LK +QD + H E M+
Sbjct: 1727 INTKKKLETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMK 1786
Query: 502 ---ESTVKD-KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSS 552
E TVKD ++ L E L K+Q++ L R ELEA+ +++ K V+ VK LR
Sbjct: 1787 KNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEAEVESEQKRNVEAVKGLRKH 1846
Query: 553 QIGLKQELSQMLNEKSKT----EELLQQERQTHNHMKTVREKLLHECRILLNRFQACNAN 608
+ +K EL+ E K ++L+ + + K E+ +C I L++F+
Sbjct: 1847 ERRVK-ELTYQTEEDRKNVLRLQDLVDKLQAKVKSYKRQAEEAEEQCNINLSKFRKLQHE 1905
Query: 609 LYAEEEDNVILES 621
L EE I ES
Sbjct: 1906 LEEAEERADIAES 1918
>sp|O70156|OLR1_RAT Oxidized low-density lipoprotein receptor 1 OS=Rattus norvegicus
GN=Olr1 PE=2 SV=1
Length = 364
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 92/189 (48%), Gaps = 18/189 (9%)
Query: 398 LSRVLLTMERRLVTAKTDM---EDLITRLNQEMTVKDYLMTKVKDLEVELETTKQKSKET 454
L+ + L + L+ +T + DL+ + +T +D+++ + + E Q+SK
Sbjct: 41 LAILCLVLSVTLIVQQTQLLQVSDLLKQYQANLTQQDHILEGQMSAQKKAENASQESKRE 100
Query: 455 LQQAILSERERLTQMQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKDKNVLQE- 513
L +E++ + W + E KS E E L+ Q+ + ++ + K L+E
Sbjct: 101 L-------KEQIDTLTWKLNE---KSKEQEKLLQQNQNLQEALQRAVNASEESKWELKEQ 150
Query: 514 LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQE---LSQMLNEKSK- 569
+D +L +SK +EL +++ + L K K+ SQ LK++ LS LNEKSK
Sbjct: 151 IDILNWKLNGISKEQKELLQQNQNLQEALQKAEKYSEESQRELKEQIDTLSWKLNEKSKE 210
Query: 570 TEELLQQER 578
EELLQQ +
Sbjct: 211 QEELLQQNQ 219
>sp|Q9BE41|MYH2_BOVIN Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
Length = 1940
Score = 37.4 bits (85), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
+TQ+Q +ME++ Q++ E K LK +QD + H E M+ E TVKD
Sbjct: 1739 ITQIQGEMEDILQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDL 1798
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
+N L E L K+Q++ L R ELE + +++ K V+ VK LR + +K+
Sbjct: 1799 QNRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERRVKE 1854
>sp|Q9BE40|MYH1_BOVIN Myosin-1 OS=Bos taurus GN=MYH1 PE=2 SV=2
Length = 1938
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
+TQ+Q +ME++ Q++ E K LK +QD + H E M+ E TVKD
Sbjct: 1737 ITQIQGEMEDIIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDL 1796
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
++ L E L K+Q++ L R ELE + +++ K V+ VK LR + +K+
Sbjct: 1797 QHRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERRVKE 1852
>sp|P13533|MYH6_HUMAN Myosin-6 OS=Homo sapiens GN=MYH6 PE=1 SV=5
Length = 1939
Score = 34.3 bits (77), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
LTQ+Q ++EE Q+ E K LK +QD + H E M+ E T+KD
Sbjct: 1736 LTQLQSEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDL 1795
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
++ L E L K+QL+ L R ELE + +A+ K + VK +R S+ +K+
Sbjct: 1796 QHRLDEAEQIALKGGKKQLQKLEARVRELEGELEAEQKRNAESVKGMRKSERRIKE 1851
>sp|P12882|MYH1_HUMAN Myosin-1 OS=Homo sapiens GN=MYH1 PE=1 SV=3
Length = 1939
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
++Q+Q +ME++ Q++ E K LK +QD + H E M+ E TVKD
Sbjct: 1738 ISQIQGEMEDIIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDL 1797
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
++ L E L K+Q++ L R ELE + +++ K V+ VK LR + +K+
Sbjct: 1798 QHRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERKVKE 1853
>sp|P13539|MYH6_MESAU Myosin-6 OS=Mesocricetus auratus GN=MYH6 PE=2 SV=2
Length = 1939
Score = 33.5 bits (75), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
LTQ+Q ++EE Q+ E K LK +QD + H E M+ E T+KD
Sbjct: 1736 LTQLQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDL 1795
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
++ L E L K+QL+ L R ELE + +A+ K + VK +R S+ +K+
Sbjct: 1796 QHRLDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKE 1851
>sp|Q02566|MYH6_MOUSE Myosin-6 OS=Mus musculus GN=Myh6 PE=1 SV=2
Length = 1938
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
LTQ+Q ++EE Q+ E K LK +QD + H E M+ E T+KD
Sbjct: 1736 LTQLQTEVEEAVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDL 1795
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
++ L E L K+QL+ L R ELE + +A+ K + VK +R S+ +K+
Sbjct: 1796 QHRLDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKE 1851
>sp|Q9TV63|MYH2_PIG Myosin-2 OS=Sus scrofa GN=MYH2 PE=2 SV=1
Length = 1939
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 45/186 (24%)
Query: 417 EDLITRLNQEMTVKDYLMTKVKDLEVELETTKQKSKETLQQAILSERER----------- 465
EDL +L + L ++++L LE T ++S++ +Q +L ER
Sbjct: 1669 EDLKEQLAMVERRANLLQAEIEELRATLEQT-ERSRKVAEQELLDASERVQLLHTQNTSL 1727
Query: 466 ----------LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME 501
++QMQ +ME++ Q++ E K LK +QD + H E M+
Sbjct: 1728 INTKKKLETDISQMQGEMEDILQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMK 1787
Query: 502 ---ESTVKD-KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSS 552
E TVKD ++ L E L K+Q++ L R ELE + +++ K + VK LR
Sbjct: 1788 KNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNAEAVKGLRKH 1847
Query: 553 QIGLKQ 558
+ +K+
Sbjct: 1848 ERRVKE 1853
>sp|O35711|LIPB2_MOUSE Liprin-beta-2 OS=Mus musculus GN=Ppfibp2 PE=1 SV=3
Length = 882
Score = 33.5 bits (75), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 27/215 (12%)
Query: 404 TMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKVKDLEVELETTKQK---SKETLQQAIL 460
T + RL + D E LI +++ + K++DLEV LE + K ++E LQQ +L
Sbjct: 106 TYQERLARLEGDKESLILQVSVLTDQVEAQGEKIRDLEVCLEGHQVKLNAAEEMLQQELL 165
Query: 461 SERERLTQ---MQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKDKNVLQELDAT 517
S TQ + ++ EL+ K + ME + K +++ AE + LQEL
Sbjct: 166 SRTSLETQKLDLMTEVSELKLKLVGMEKEQKEQEEKQRKAEEL----------LQELKHL 215
Query: 518 K---EQLENLSKRYE-ELEAKSKADIKVLVKEVKFLRSSQIGLKQELSQMLNEKSKTEEL 573
K E+LEN +YE EL+A +KA++ L ++V + L +LS+ S E
Sbjct: 216 KIKVEELENERNQYEWELKA-TKAEVAQLQEQVALKDAEIERLHSQLSRSAALHSDHAER 274
Query: 574 LQQERQTHNHMKTV------REKLLHECRILLNRF 602
Q+ + M+T+ +++ + E LLN++
Sbjct: 275 DQEIHRLKMGMETLLVANEDKDRRIEELTGLLNKY 309
>sp|Q076A4|MYH8_CANFA Myosin-8 OS=Canis familiaris GN=MYH8 PE=3 SV=1
Length = 1939
Score = 33.5 bits (75), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 86/186 (46%), Gaps = 45/186 (24%)
Query: 417 EDLITRLNQEMTVKDYLMTKVKDLEVELETTKQKSKETLQQAILSERERL---------- 466
EDL +L + L ++++L LE T ++S++T +Q +L ER+
Sbjct: 1670 EDLKEQLAMVERRANLLQAEIEELRATLEQT-ERSRKTAEQELLDASERVQLLHTQNTSL 1728
Query: 467 -----------TQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME 501
+Q+Q ++EE+ Q+S E K LK +QD + H E M+
Sbjct: 1729 INTKKKLENDVSQLQSEVEEVIQESRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMK 1788
Query: 502 ---ESTVKD-KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSS 552
E TVKD ++ L E L K+Q++ L R ELE + +++ K + VK LR
Sbjct: 1789 KNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVHELEGEVESEQKRNAEAVKGLRKH 1848
Query: 553 QIGLKQ 558
+ +K+
Sbjct: 1849 ERRVKE 1854
>sp|O95613|PCNT_HUMAN Pericentrin OS=Homo sapiens GN=PCNT PE=1 SV=4
Length = 3336
Score = 33.1 bits (74), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 520 QLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQELSQMLNEKSKTEELLQQERQ 579
+LENL YE+L+A+S+ +I+ L ++ R+S+ L + Q+L S+ E+L Q
Sbjct: 448 ELENLQASYEDLKAQSQEEIRRLWSQLDSARTSRQELSELHEQLLARTSRVEDL----EQ 503
Query: 580 THNHMKTVREKLLHECRILLNR 601
KT E L + RI +
Sbjct: 504 LKQREKTQHESELEQLRIYFEK 525
>sp|Q8ND30|LIPB2_HUMAN Liprin-beta-2 OS=Homo sapiens GN=PPFIBP2 PE=1 SV=3
Length = 876
Score = 33.1 bits (74), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 29/207 (14%)
Query: 404 TMERRLVTAKTDMEDLITRLNQEMTVKDYLMTKVKDLEVELETTKQK---SKETLQQAIL 460
T + RL + D E LI +++ + K++DLEV LE + K ++E LQQ +L
Sbjct: 106 TYQERLARLEGDKESLILQVSVLTDQVEAQGEKIRDLEVCLEGHQVKLNAAEEMLQQELL 165
Query: 461 SERERLTQ---MQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKDKNVLQELDAT 517
S TQ + ++ EL+ K + ME + + +++ AE + LQEL
Sbjct: 166 SRTSLETQKLDLMTEVSELKLKLVGMEKEQREQEEKQRKAEEL----------LQELRHL 215
Query: 518 K---EQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLK-QELSQMLNEKSKTEEL 573
K E+LEN +YE +KA++ L Q+ LK E+ ++ ++ S+T
Sbjct: 216 KIKVEELENERNQYEWKLKATKAEVAQL--------QEQVALKDAEIERLHSQLSRTAA- 266
Query: 574 LQQERQTHNHMKTVREKLLHECRILLN 600
L E T + R K+ E +L N
Sbjct: 267 LHSESHTERDQEIQRLKMGMETLLLAN 293
>sp|Q9TV61|MYH1_PIG Myosin-1 OS=Sus scrofa GN=MYH1 PE=2 SV=1
Length = 1939
Score = 33.1 bits (74), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKD- 507
++Q+Q +ME++ Q++ E K LK +QD + H E M+ E TVKD
Sbjct: 1738 ISQIQGEMEDIIQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDL 1797
Query: 508 KNVLQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
++ L E L K+Q++ L R ELE + +++ K V+ VK LR + +K+
Sbjct: 1798 QHRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVETVKGLRKHERRVKE 1853
>sp|Q9Y623|MYH4_HUMAN Myosin-4 OS=Homo sapiens GN=MYH4 PE=1 SV=2
Length = 1939
Score = 33.1 bits (74), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKDK 508
++Q+Q +ME++ Q++ E K LK +QD + H E M+ E TVKD
Sbjct: 1738 ISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDL 1797
Query: 509 NV-LQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
+ L E L K+Q++ L R ELE++ +++ K V+ VK LR + +K+
Sbjct: 1798 QLRLDEAEQLALKGGKKQIQKLEARVRELESEVESEQKHNVEAVKGLRKHERRVKE 1853
>sp|Q9UKX2|MYH2_HUMAN Myosin-2 OS=Homo sapiens GN=MYH2 PE=1 SV=1
Length = 1941
Score = 33.1 bits (74), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Query: 466 LTQMQWDMEELRQKSLEMEWK--------------LKSKQDGNPHAESME---ESTVKDK 508
++QMQ +ME++ Q++ E K LK +QD + H E M+ E TVKD
Sbjct: 1740 ISQMQGEMEDILQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDL 1799
Query: 509 NV-LQE-----LDATKEQLENLSKRYEELEAKSKADIKVLVKEVKFLRSSQIGLKQ 558
+ L E L K+Q++ L R ELE + +++ K + VK LR + +K+
Sbjct: 1800 QLRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNAEAVKGLRKHERRVKE 1855
>sp|Q9NS87|KIF15_HUMAN Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF15 PE=1 SV=1
Length = 1388
Score = 32.7 bits (73), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 108/210 (51%), Gaps = 25/210 (11%)
Query: 391 PLDQRHKLSRVLLTMERRL---VTAKTDMEDLITRLNQEMTVKDYLMTKVKDLEVELETT 447
P Q H L+++L T E+ + +KT +E L+T+LN++ VK+ + ++K+ E+E
Sbjct: 1146 PHFQTH-LAKLLETQEQEIEDGRASKTSLEHLVTKLNEDREVKNAEILRMKEQLREMENL 1204
Query: 448 KQKSKETLQQAILSERERLTQMQWDMEELRQKSLEMEWKLKSKQDGNPHAESMEESTVKD 507
+ +S++ L E+ L Q Q D + RQK + ++Q N ES++E K
Sbjct: 1205 RLESQQ------LIEKNWLLQGQLD-DIKRQKENSDQNHPDNQQLKNEQEESIKERLAKS 1257
Query: 508 KNVLQELDATKEQLENL-SKRY-EELEAKSKADIKVLVKEVKFLRSSQIGLKQELSQMLN 565
K +++E+ K LE + S Y +E+E D V+ + L S K++L
Sbjct: 1258 K-IVEEMLKMKADLEEVQSALYNKEMECLRMTDE---VERTQTLESKAFQEKEQL----- 1308
Query: 566 EKSKTEELLQQERQTHNHMKTVREKLLHEC 595
+SK EE+ ++ +T M+ +R+++ EC
Sbjct: 1309 -RSKLEEMYEERERTSQEMEMLRKQV--EC 1335
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.128 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,820,708
Number of Sequences: 539616
Number of extensions: 10919139
Number of successful extensions: 43455
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 2184
Number of HSP's that attempted gapping in prelim test: 37277
Number of HSP's gapped (non-prelim): 6029
length of query: 724
length of database: 191,569,459
effective HSP length: 125
effective length of query: 599
effective length of database: 124,117,459
effective search space: 74346357941
effective search space used: 74346357941
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)