BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 004914
(724 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P93231|VPS41_SOLLC Vacuolar protein sorting-associated protein 41 homolog OS=Solanum
lycopersicum GN=VPS41 PE=2 SV=1
Length = 960
Score = 1263 bits (3269), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/727 (85%), Positives = 668/727 (91%), Gaps = 4/727 (0%)
Query: 1 MAPFPAENGVEGDDEREEEEEEDEDEEEEEEEEEEEPRLKYQRMGGSLPSLLANDAASCV 60
M+P P+ENG++ D+ +EEEED +EEE EEEEE+EPRLKYQRMG S+PSLL+ DAA+C+
Sbjct: 1 MSPKPSENGID-GDDERDEEEEDSEEEEAEEEEEDEPRLKYQRMGASVPSLLSADAATCI 59
Query: 61 AVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVIN 120
AVAERMIALGTH G VHILDFLGNQVKEF AHTAAVNDL FD DGEYVGSCSDDGSVVIN
Sbjct: 60 AVAERMIALGTHGGAVHILDFLGNQVKEFAAHTAAVNDLCFDTDGEYVGSCSDDGSVVIN 119
Query: 121 SLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKWLGYRDQVLHSG 180
SLFTDE+MKF+YHRPMKAI+LDPDY R SRRFV GGLAG LYLN KKWLGYRDQVLHSG
Sbjct: 120 SLFTDERMKFEYHRPMKAIALDPDYARTSSRRFVTGGLAGQLYLNVKKWLGYRDQVLHSG 179
Query: 181 EGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPHLVWQDDTLL 240
EGP+H VKWRTSL+AWAND GVKVYDA+NDQRITFIERPRG PRPELLLPH+VWQDD+LL
Sbjct: 180 EGPIHAVKWRTSLVAWANDTGVKVYDASNDQRITFIERPRGIPRPELLLPHIVWQDDSLL 239
Query: 241 VIGWGTYIKIASIKTNQSNVANGTYRHVGM---NQVDIVASFQTSYYISGIAPFGDCLVV 297
VIGWGT +KIA I+T QS ANGTY+H+ M NQVDIVASFQTSY+ISGIAPFGD LV+
Sbjct: 240 VIGWGTSVKIALIRTTQSKGANGTYKHMSMSSLNQVDIVASFQTSYFISGIAPFGDSLVI 299
Query: 298 LAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNNDELTTDALPVLGFEHYKAKDYSL 357
LAYIPGEEDGEK+FSST+PSRQGNAQRPEVR+VTWNNDEL TDALPV GFEHYKAKDYSL
Sbjct: 300 LAYIPGEEDGEKDFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSL 359
Query: 358 AHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVE 417
AHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHI WLL+HGWHEKAL AVE
Sbjct: 360 AHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHINWLLQHGWHEKALEAVE 419
Query: 418 AGQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVL 477
A QG+SELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVL
Sbjct: 420 ANQGQSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVL 479
Query: 478 VPYMPTENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNS 537
VPY+PTENPRLRDTAYEVALVALATNPSFHK LLSTVKSWPP IYS PV SAIEPQ+N+
Sbjct: 480 VPYIPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPRIYSTTPVFSAIEPQINT 539
Query: 538 SSMTDALKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLD 597
SSMTD LKEALAELYVIDG ++KAF+LYADLMKP +FDFIE HNLHDA+REKV+QLM++D
Sbjct: 540 SSMTDPLKEALAELYVIDGQHDKAFALYADLMKPDLFDFIEKHNLHDAVREKVLQLMMID 599
Query: 598 CKRAVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQV 657
CKRAV LLIQ +DLI PSEVV+QL+ ARDKCD RYFLHLYLH+LFEVN HAGKD+HDMQV
Sbjct: 600 CKRAVLLLIQQRDLIPPSEVVSQLIAARDKCDYRYFLHLYLHSLFEVNLHAGKDYHDMQV 659
Query: 658 ELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKL 717
ELYADYD KMLL FLRSSQHYTLEKAYEICVK+DLL+EQVFILGRMGN K ALAVIIN+L
Sbjct: 660 ELYADYDPKMLLTFLRSSQHYTLEKAYEICVKKDLLKEQVFILGRMGNAKQALAVIINRL 719
Query: 718 GDIEEVF 724
GDIEE
Sbjct: 720 GDIEEAI 726
>sp|P93043|VPS41_ARATH Vacuolar protein sorting-associated protein 41 homolog
OS=Arabidopsis thaliana GN=VPS41 PE=3 SV=3
Length = 980
Score = 1171 bits (3030), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 573/700 (81%), Positives = 624/700 (89%), Gaps = 16/700 (2%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
PRLKYQRMGG++P+LL+NDAASC+AVA RMIALGTH GTV ILD LGNQVKEF AHTA V
Sbjct: 42 PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPV 101
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTD-EKMKFDYHRPMKAISLDPDYTRKMSRRFVA 155
ND++FD +GEY+GSCSDDGSVVINSLFTD EKMKFDYHRPMKAISLDPDYT+K S+RFVA
Sbjct: 102 NDINFDTEGEYIGSCSDDGSVVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVA 161
Query: 156 GGLAGHLYLNSKKWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
GGLAGHLY+NSKKW G +DQVLHSGEGP+H VKWR SLIAWAND GVKVYD A DQR+TF
Sbjct: 162 GGLAGHLYMNSKKWFGNKDQVLHSGEGPIHSVKWRGSLIAWANDVGVKVYDTAKDQRVTF 221
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMN---Q 272
IE+PRGSPRPE LLPHLVWQDDTLLVIGWGT +KIASIK++Q GT+R + M+ Q
Sbjct: 222 IEKPRGSPRPEALLPHLVWQDDTLLVIGWGTSVKIASIKSDQQQ--TGTFRQIQMSSLTQ 279
Query: 273 VDIVASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLP-SRQGNAQRPEVRIVT 331
VDIVASFQTSYYISGIAPFGD LV+LAYIP E DGEKEFSST SRQGNAQRPE+RIV+
Sbjct: 280 VDIVASFQTSYYISGIAPFGDSLVILAYIPIEGDGEKEFSSTTTLSRQGNAQRPEIRIVS 339
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIA 391
WNNDELT DALPV GFEHYKAKDYSLAHAPF GSSYAGGQWAAGDEPLYYIVSPKDVVIA
Sbjct: 340 WNNDELTMDALPVHGFEHYKAKDYSLAHAPFPGSSYAGGQWAAGDEPLYYIVSPKDVVIA 399
Query: 392 KPRDAEDHIAWLLEHGWHEKALAAVEAGQGRSELLDEVGSRYLDHLIVERKYAEAASLCP 451
KPRDAEDHI WLL+HG+HEKALAAVEA +GR+EL+D+VG+ YLDHLIVERKYAEAASLCP
Sbjct: 400 KPRDAEDHINWLLQHGFHEKALAAVEASEGRTELIDKVGAGYLDHLIVERKYAEAASLCP 459
Query: 452 KLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKYLL 511
KLLRGSASAWERWVFHFA LRQLPVLVPYMPT+NPRL+DT YEVALVALATNPS+HK LL
Sbjct: 460 KLLRGSASAWERWVFHFAQLRQLPVLVPYMPTDNPRLKDTVYEVALVALATNPSYHKELL 519
Query: 512 STVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYVIDGHYEKAFSLYADLMKP 571
S VKSWP +YSAL VISAIEPQLN+SSMTDALKEALAELYVIDG Y+KAFSLYADL+KP
Sbjct: 520 SAVKSWPRSVYSALTVISAIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLKP 579
Query: 572 YIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLITPSEVVTQL---------L 622
+FDFIE ++LH+AIR KVVQLMLLDCKRA L IQN+DLI PSEVV QL L
Sbjct: 580 EVFDFIEKYSLHEAIRGKVVQLMLLDCKRATVLFIQNRDLIPPSEVVPQLLKAGKNPQVL 639
Query: 623 NARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEK 682
A KCDSRY+L+LYLHALFEV+ GKDFHDMQVELYA+YD KMLLPFLRSSQHY LEK
Sbjct: 640 KAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVELYAEYDTKMLLPFLRSSQHYKLEK 699
Query: 683 AYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEE 722
AYE+CVK+D LREQVF+LGRMGN K ALAVIINKLGDIEE
Sbjct: 700 AYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEE 739
>sp|P49754|VPS41_HUMAN Vacuolar protein sorting-associated protein 41 homolog OS=Homo
sapiens GN=VPS41 PE=1 SV=3
Length = 854
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 262/694 (37%), Positives = 402/694 (57%), Gaps = 47/694 (6%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG V + L++ E+ + P+K I++ P + R ++FV G
Sbjct: 88 NQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK++D + QRIT
Sbjct: 148 G--KKLLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+ L+IGWGT +K+ S+K ++ R + V+I
Sbjct: 206 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHAS----EMRDLPSRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIV---T 331
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + RP + I+ +
Sbjct: 262 VSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA----------RPRLDIIQPLS 311
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIA 391
+E+++DAL V GF+ + +DY L Y+ G E L+YIVSP+DVV+A
Sbjct: 312 ETCEEISSDALTVRGFQENECRDYHL--------EYSEG------ESLFYIVSPRDVVVA 357
Query: 392 KPRDAEDHIAWLLEHGWHEKALAAVEAGQ---GRSELLDEVGSRYLDHLIVERKYAEAAS 448
K RD +DHI WLLE +E+AL A E Q R ++LD +G Y++HL+ Y AA
Sbjct: 358 KERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILD-IGLAYINHLVERGDYDIAAR 416
Query: 449 LCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHK 508
C K+L +A+ WE V+ F + QL + PY+P +P L+ YE+ L S ++
Sbjct: 417 KCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLE--SDYE 474
Query: 509 YLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYVIDGHYEKAFSLYADL 568
+ ++ WP +Y+ ++ A+ L S L + LAELY D +Y A +Y L
Sbjct: 475 GFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTL 534
Query: 569 MKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLITPSEVVTQLLNARDKC 628
+F I HNL +I++K+V LM D ++AV +L+ N+D I+ +VV +L
Sbjct: 535 RHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELE------ 588
Query: 629 DSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICV 688
D H+YLH LF+ + H G+ +H+ Q+ LYA+YD LLPFLR S H LEKA EIC
Sbjct: 589 DRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQ 648
Query: 689 KRDLLREQVFILGRMGNTKHALAVIINKLGDIEE 722
+R+ + E V++L RMGN++ AL +I+ +L D+++
Sbjct: 649 QRNFVEETVYLLSRMGNSRSALKMIMEELHDVDK 682
>sp|Q5KU39|VPS41_MOUSE Vacuolar protein sorting-associated protein 41 homolog OS=Mus
musculus GN=Vps41 PE=2 SV=1
Length = 853
Score = 477 bits (1228), Expect = e-133, Method: Compositional matrix adjust.
Identities = 263/694 (37%), Positives = 402/694 (57%), Gaps = 47/694 (6%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 86
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG + + L++ E+ + P+K I++ P + R ++FV G
Sbjct: 87 NQISLDDSGEHMGVCSEDGKLQVFGLYSGEEFHETFDCPIKIIAVHPQFVRSSCKQFVTG 146
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVKV+D + QRI+
Sbjct: 147 G--KKLLLFERTWMNRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKVFDITSKQRISN 204
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+ L+IGWGT IKI S+K ++ R + V+I
Sbjct: 205 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSIKICSVKERHAS----EMRDLPSRYVEI 260
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIVT--- 331
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + RP + I+
Sbjct: 261 VSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA----------RPRLDIIQPLP 310
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIA 391
+E+++DAL V GF+ + +DY L Y+ G E L+Y+VSP+DVV+A
Sbjct: 311 ETCEEISSDALTVRGFQENECRDYHL--------EYSEG------ESLFYVVSPRDVVVA 356
Query: 392 KPRDAEDHIAWLLEHGWHEKALAAVEAGQ---GRSELLDEVGSRYLDHLIVERKYAEAAS 448
K RD +DHI WLLE +E+AL A E Q R ++LD +G Y++HL+ +Y AA
Sbjct: 357 KERDQDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILD-IGLAYVNHLVERGEYDMAAR 415
Query: 449 LCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHK 508
C K+L +AS WE V+ F + QL + PY+P +P L+ YE+ L S ++
Sbjct: 416 KCQKILGKNASLWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLE--SDYE 473
Query: 509 YLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYVIDGHYEKAFSLYADL 568
+ ++ WP +Y+ ++ A+ L S L + LAELY D +Y A +Y L
Sbjct: 474 GFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTL 533
Query: 569 MKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLITPSEVVTQLLNARDKC 628
+F I HNL +I++K+V LM D ++AV +L+ N+D I+ +VV +L
Sbjct: 534 RHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELE------ 587
Query: 629 DSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICV 688
D H+YLH LF+ + H G+ +H+ Q+ LYA+YD LLPFLR S H LEKA EIC
Sbjct: 588 DRPELQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQ 647
Query: 689 KRDLLREQVFILGRMGNTKHALAVIINKLGDIEE 722
+R+ + E V++L RMGN++ AL +I+ +L D+++
Sbjct: 648 QRNFVEETVYLLSRMGNSRSALKMIMEELHDVDK 681
>sp|Q9P7N3|VPS41_SCHPO Vacuolar protein sorting-associated protein 41
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=vps41 PE=3 SV=2
Length = 871
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 224/696 (32%), Positives = 370/696 (53%), Gaps = 47/696 (6%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+L Y+R+ ND S A+++ G+H G ++I G +++ H+A+V
Sbjct: 24 PKLIYERITEKFQGCFMNDTISACAISKEHFFFGSHNGAIYIYQKNGILLRKMILHSASV 83
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
DLS D++ E + SCS DG ++I+++ T E D+ RP+ ++++DP Y+ + SR+ ++G
Sbjct: 84 VDLSVDLESENLASCSMDGKMIISNITTRETTVHDFKRPLLSVAIDPYYSTRSSRQVLSG 143
Query: 157 GLAGHLYLNSKKWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFI 216
G AG + L+ K WLG +D VL + G V+ + W T+ IAWA+D G+ VY + + +
Sbjct: 144 GRAGKVVLSEKGWLGNKDTVLQADCGAVYKISWYTTYIAWASDLGITVYSTEFGKVLGRL 203
Query: 217 ERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDIV 276
E P+ P E+ L WQ ++ LVIGW I I SI+ +SNVAN + ++ +
Sbjct: 204 EPPKRLPNDEIFPYQLFWQSESRLVIGWSDQIMIVSIQ--RSNVAN------ELPKISLQ 255
Query: 277 ASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNNDE 336
A + +SG+ G ++ LAYI ED F+S +PS++ RPE+R++ + E
Sbjct: 256 ALLEIDSIVSGVLMLGFNILTLAYIANVED----FTSAIPSQRIEGCRPELRLIDSSFKE 311
Query: 337 LTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDA 396
L DA+ + + + DY L P S S +++SP D+V + R+
Sbjct: 312 LCGDAIGLANYSRLQPSDYHLLPDPSSNSH-------------SFVISPNDIVYVRERNQ 358
Query: 397 EDHIAWLLEHGWHEKALAAVEA--GQGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLL 454
DH+ +L+ + +A+ AV+ S + E+ +Y+ HL+ + +Y EA + P L
Sbjct: 359 IDHVKYLVSKEMYAEAIDAVKKLPEIPPSLQISELAKKYIFHLLGKGQYKEAGMVIPSLY 418
Query: 455 RGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVA-LATNP-SFHKYLLS 512
+ + WE+WVF FA L + ++PT L YE+ L LAT+ +F+K L
Sbjct: 419 NDNLAEWEQWVFVFAENDHLEDIADFLPTGENHLSPLVYEMILAQYLATDERTFNKKL-- 476
Query: 513 TVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYVIDGHYEKAFSLYADLMKPY 572
WP ++YS + +A + + + L E+LA LY+ D AF LY L
Sbjct: 477 --HEWPTMLYSVSTIRNATLKKFKENQKSSTLTESLAFLYLEDNMPIDAFHLYLKLHSEL 534
Query: 573 IFDFIENHNLHDAIREKVVQLMLL-------DCKRAV-SLLIQNKDLITPSEVVTQLLNA 624
D I HNL+D R V+ LML+ D K A+ S+L+Q+ P EV+ Q+ +
Sbjct: 535 CIDLILQHNLYDEARASVLLLMLISSKGKSSDTKSAMSSMLVQHVHSFPPQEVIMQIHSV 594
Query: 625 RDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAY 684
FL+ Y + P++ ++ D++++++A++D K FL ++Q Y+L+ A
Sbjct: 595 PQ------FLYEYFCEFELMYPNSLMEYGDLKLDVFAEFDRKRFFDFLVNTQCYSLDHAA 648
Query: 685 EICVKRDLLREQVFILGRMGNTKHALAVIINKLGDI 720
+IC + + L E V+ILGRMGN K AL +IIN+L DI
Sbjct: 649 QICKQYNYLDELVYILGRMGNNKEALMLIINELLDI 684
>sp|Q19954|VPS41_CAEEL Vacuolar protein sorting-associated protein 41 homolog
OS=Caenorhabditis elegans GN=vps-41 PE=3 SV=4
Length = 901
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 197/755 (26%), Positives = 342/755 (45%), Gaps = 110/755 (14%)
Query: 28 EEEEEEEEEPRLKYQRMGG--SLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLG-- 83
E+++E EPR KY+R+ G +LP + + + + ++ IA+GT G ++ILD G
Sbjct: 30 EDDDEPPLEPRFKYERLKGEETLP-FMKTATFTSIDLHDKFIAIGTATGLIYILDHHGYG 88
Query: 84 --NQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDE-KMKFDYHRPMKAIS 140
+ V H AV+ + FD G YV SC++D +V++ + D+ + K+I
Sbjct: 89 NFDSVPPLKPHRCAVSKVKFDETGSYVLSCANDSKIVVSGVGNDKLCCTINIQVMPKSIY 148
Query: 141 LDPDYTRKMS-RRFVAGGLAGHLYLNSKKWLGYRDQVLHSG---EGPVHVVKWRTSLIAW 196
PD+ R+ S F+ G +L L K+ Y+ L+SG +G +H W +LIA+
Sbjct: 149 FSPDFIRQQSGHCFIMG--ERNLVLYEKRMFQYKASSLYSGSERDGFIHCCSWNENLIAF 206
Query: 197 ANDAGVKVYDAANDQRITFIE------RPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKI 250
ND G +VY+ ++ IT ++ R R S P P W + LVIGW + I
Sbjct: 207 TNDTGTRVYERGAERIITSVQPSHDVDRVRSSRSP----PKHTWMPENNLVIGWADTVTI 262
Query: 251 ASIKTNQSNVANGTYRHVGMNQVDIVASFQTSYYISGIA--------------------- 289
I+ + V G H+ F S +I GI+
Sbjct: 263 LKIR-DDDGVKKGEVHHI----------FHVSMFICGISYIPESGIDNMELFLVGLQLEG 311
Query: 290 -PFGDCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNNDELTTDALPVLGFE 348
F DC V++ + E + L + +R + EL ++ + E
Sbjct: 312 EDFDDCASVISTVTTLTALESSACTILKTSV-------IRPLGLKEFELQSEDM----IE 360
Query: 349 HYKAKDYSLAHAPFS-GSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHG 407
K +++L + G Y Y+I++ K +++A P ED I W L++
Sbjct: 361 SVKLSNHTLPYMIHGLGIPYLAT---------YFILTTKHIIMAVPYGPEDGIRWRLKYK 411
Query: 408 WHEKALAAVEAGQGRSELLDE-------VGSRYLDHLIVERKYAEAASLCPKLLRGSASA 460
+++AL + + ++LL + VG ++ + ++ AAS P +
Sbjct: 412 LYDEAL---DMAKHNADLLSKTDLSPKKVGRMIIEGYLTGKRARAAASRLPLICGECKEE 468
Query: 461 WERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPV 520
WE V F ++ +L +P P L Y+ L+A N K V++W P
Sbjct: 469 WEWAVNQFEEVKLCTLLAEVLPDGTPTLDPECYQKVLIACLFNNV--KQFRKLVQTWSPD 526
Query: 521 IYSALPVISAIEPQLN----SSSMTDA------LKEALAELYVIDGHYEKAFSLYADLMK 570
+Y +I + ++ S ++ D L +ALA LY+ + YE A +
Sbjct: 527 LYMTSFIIDRTQWRIQQISKSGNLADVDETERVLMDALAHLYLYERKYESALKILMSCQD 586
Query: 571 PYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLITPSEVVTQLLNARDKCDS 630
IF+ I+ H L D +++++ +LM ++ +RA+ LL+ N D + PS V+ +K
Sbjct: 587 FQIFNVIDKHQLFDLVKDQITELMNINSERALRLLLDNADSVEPSFVM-------EKIGR 639
Query: 631 RYFLHL-YLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVK 689
+ L L YL L N G +F D V+LYA+YD K LLPFLR + +Y + KA ++C
Sbjct: 640 QPKLQLAYLTKLMSRN--EGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLCSD 697
Query: 690 RDLLREQVFILGRMGNTKHALAVIINKLGDIEEVF 724
+ + E +++L + GN A+ +++ + ++E+V
Sbjct: 698 KGYIEETIYLLAKSGNHYDAVKMMVREYRNMEKVI 732
>sp|Q618H8|VPS41_CAEBR Vacuolar protein sorting-associated protein 41 homolog
OS=Caenorhabditis briggsae GN=vps-41 PE=3 SV=1
Length = 898
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 199/739 (26%), Positives = 348/739 (47%), Gaps = 79/739 (10%)
Query: 28 EEEEEEEEEPRLKYQRMGG--SLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLG-- 83
E+E+E EPR KY+R+ G +LP + + + + ++ IA+GT +G ++ILD G
Sbjct: 27 EDEDEAPLEPRFKYERLEGESTLP-FMKTATFTSIDLHDKFIAIGTASGLIYILDHHGYG 85
Query: 84 --NQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPM-KAIS 140
+ V H AV+ L FD G Y+ SC++D +V++ + D+ + M K+I
Sbjct: 86 NFDSVPPLKPHRCAVSKLKFDETGSYILSCANDSKLVVSGIGNDKLCCTVNIQVMPKSIC 145
Query: 141 LDPDYTRKMS-RRFVAGGLAGHLYLNSKKWLGYRDQVLHSG---EGPVHVVKWRTSLIAW 196
PD+ R+ S F+ G +L L K+ Y+ L+SG +G +H W +LIA+
Sbjct: 146 FSPDFIRQQSGHCFIMG--ERNLVLYEKRLFQYKASNLYSGSERDGFIHCCSWNDNLIAF 203
Query: 197 ANDAGVKVYDAANDQRITFIE------RPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKI 250
ND G +VY+ ++ +T ++ R R S P P +W + LVIGW + +
Sbjct: 204 TNDTGTRVYERGTEKILTSVQPTHDVDRVRSSRCP----PKHMWMSENTLVIGWADTVTV 259
Query: 251 ASIKTNQSNVANGTYRHVGMNQVDIVASFQTSYYISGIAPF----GDCLVVLAYIPGEED 306
IK N+ GM + +I F S +ISGI+ D + L + E +
Sbjct: 260 LKIKGNE-----------GMRKGEIHHIFHVSMFISGISYLPKNGSDYELFLVGLQMEGE 308
Query: 307 GEKEFSSTLPSRQGNAQRPEVRIVTWNNDELTTDALPVLGFEHYKAK-DYSLAHAPFSGS 365
+ +S + + T L T + LG + Y+ + + + + S
Sbjct: 309 DFDDCASVMSTMTTLTAMESSATAT-----LKTCVIRPLGLKDYELQSEDEIVNIRLSTH 363
Query: 366 SYAGGQWAAGDEPL--YYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQGRS 423
+ G L Y+I++ K +++A P ED I W L++ + +A E + +
Sbjct: 364 TLPYMIHGLGIPYLSTYFILTTKQIIMAVPYGPEDGIKWRLQYKLYTEAF---EMAKEHA 420
Query: 424 ELL-------DEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPV 476
++L +VG + ++ + +K AAS + WE V F + +
Sbjct: 421 DMLAKTDVSPKKVGRKIIEGYLESKKARVAASWLSSICGDCKEEWEWAVDRFHDAKMSTL 480
Query: 477 LVPYMPTENPRLRDTAYE-VALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQL 535
L +P PRL +AYE V L +L N + L V++W P +Y +I + ++
Sbjct: 481 LGDVLPDSKPRLDPSAYEKVLLASLFNNVKLFRRL---VQTWSPDLYMTSTIIDQTQWRI 537
Query: 536 NSSSMT----------DALKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDA 585
S + L +ALA LY+ + YE A + IF+ I+ H L D
Sbjct: 538 QQISKSEDIEDVEEVEKILMDALAHLYLYERKYESALKILMICQDFQIFNVIDKHQLFDL 597
Query: 586 IREKVVQLMLLDCKRAVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVN 645
+++++ LM ++ +RA+ LL+ N D + PS V+ ++ N + K Y L ++
Sbjct: 598 VKDQISDLMNINSERALRLLLDNADSVEPSFVMAKI-NGQPKLQLAYLTKL-------MS 649
Query: 646 PHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGN 705
+ G +F D V+LYAD++ K LLPFL+ + +Y + KA ++C R + E +F+L + GN
Sbjct: 650 RNEGIEFADKAVQLYADHEKKKLLPFLKKNVNYNVTKARKLCSDRGFVEETIFLLAKSGN 709
Query: 706 TKHALAVIINKLGDIEEVF 724
A+ +++ + +IE+V
Sbjct: 710 HYEAVKMMVREYKNIEKVI 728
>sp|P38959|VPS41_YEAST Vacuolar protein sorting-associated protein 41 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=VPS41 PE=1
SV=2
Length = 992
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 182/792 (22%), Positives = 329/792 (41%), Gaps = 131/792 (16%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P LKY R+ + D+ S + A GTH+G +H+ +K H +++
Sbjct: 99 PLLKYTRISQLPKNFFQRDSISSCLFGDTFFAFGTHSGILHLTTCAFEPIKTIKCHRSSI 158
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKM-KFDYHRPMKAISLDPDYTRKMSRRFVA 155
L + DG+Y + S DG+V+I S+ + + ++D+ RP+ +++L ++ + SR FV+
Sbjct: 159 --LCINTDGKYFATGSIDGTVIIGSMDDPQNITQYDFKRPINSVALHSNF--QASRMFVS 214
Query: 156 GGLAGHLYLNSKKWLGYR---------------DQVLHSGEGPVHVVKWRTSLIAWANDA 200
GG+AG + L+ + WLG R D + +GP+ + LI W +D
Sbjct: 215 GGMAGDVVLSQRNWLGNRIDIVLNKKKKKKTRKDDLSSDMKGPIMGIYTMGDLILWMDDD 274
Query: 201 GVKVYDAANDQRITFIERPR-----GSPRPELLLPHLVWQDDTLLVIGWGTYI---KIA- 251
G+ D ++ I P RP+L PH+ + + +VIGWG+ I K++
Sbjct: 275 GITFCDVPTRSQLLNIPFPSRIFNVQDVRPDLFRPHVHFLESDRVVIGWGSNIWLFKVSF 334
Query: 252 -----SIKTNQSNVANGTYRH------VGM--------------NQVDIVASFQTSYYIS 286
SIK+ SN + H +G +V++ F S I+
Sbjct: 335 TKDSNSIKSGDSNSQSNNMSHFNPTTNIGSLLSSAASSFRGTPDKKVELECHFTVSMLIT 394
Query: 287 GIAPF-GDCLVVLAY-IPGEEDGE--------KEFSSTLPSRQGNAQRPEVRIVT-WNND 335
G+A F D L+ L + I EE+ K FS + PE++IV +N D
Sbjct: 395 GLASFKDDQLLCLGFDIDIEEEATIDEDMKEGKNFSKRPENLLAKGNAPELKIVDLFNGD 454
Query: 336 ELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRD 395
E+ D + + +E DY L G+ P YY++S D + +
Sbjct: 455 EIYNDEVIMKNYEKLSINDYHL------------GKHIDKTTPEYYLISSNDAIRVQELS 502
Query: 396 AEDHIAWLLEHGWHEKALAAVEAGQGRSELLDEVGSRYLDHLIVERKYAEAAS------- 448
+DH W +E + KA + G E +G ++L+ L+ ++ +
Sbjct: 503 LKDHFDWFMERKQYYKAWKIGKYVIGSEERF-SIGLKFLNSLVTKKDWGTLVDHLNIIFE 561
Query: 449 -LCPKLLRGSASAWERWVFHFAHLRQLPV-------LVPYMPTENPRLRDTAYEVALVAL 500
L S + + +A + ++ + + P +P + P LR + Y+ L
Sbjct: 562 ETLNSLDSNSYDVTQNVLKEWADIIEILITSGNIVEIAPLIP-KKPALRKSVYDDVLHYF 620
Query: 501 ATNP---SFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDA----------LKEA 547
N FH+Y + W ++S +E ++ ++S A +
Sbjct: 621 LANDMINKFHEY----ITKWDLKLFSVEDFEEELETRIEAASEPTASSKEEGSNITYRTE 676
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCK-------- 599
L LY+ + Y KA I+ NL +++V ++LL K
Sbjct: 677 LVHLYLKENKYTKAIPHLLKAKDLRALTIIKIQNLLPQYLDQIVDIILLPYKGEISHISK 736
Query: 600 -----------RAVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHA 648
+ + LL +N+ I+ + + + K + + L +
Sbjct: 737 LSIFEIQTIFNKPIDLLFENRHTISVARIYEIFEHDCPKSFKKILFCYLIKFLDTDDSFM 796
Query: 649 GKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEIC-VKRDLLREQVFILGRMGNTK 707
+ + +ELY++YD + LLPFL+ +Y +E A E+C K L E +++ G++G TK
Sbjct: 797 ISPYENQLIELYSEYDRQSLLPFLQKHNNYNVESAIEVCSSKLGLYNELIYLWGKIGETK 856
Query: 708 HALAVIINKLGD 719
AL++II++L +
Sbjct: 857 KALSLIIDELKN 868
>sp|B4N984|WDR55_DROWI WD repeat-containing protein 55 homolog OS=Drosophila willistoni
GN=GK12179 PE=3 SV=1
Length = 504
Score = 40.4 bits (93), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 59 CVAVAERMIALGTHAGTVHILDFLGNQ---VKEFPAHTAAVNDLSFDVDGEYVGSCSDDG 115
C +IAL T G VH+ ++ + +K H A D+ F DG + +CS D
Sbjct: 167 CFHPERHIIALATIIGDVHLYEYSNEENKLLKTIEVHAKACRDVEFTEDGRSLITCSKDK 226
Query: 116 SVVINSLFTDEKMK 129
SV+I + T EK+K
Sbjct: 227 SVMITDMET-EKLK 239
>sp|Q0IF90|WDR55_AEDAE WD repeat-containing protein 55 homolog OS=Aedes aegypti
GN=AAEL006422 PE=3 SV=1
Length = 468
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 87/198 (43%), Gaps = 29/198 (14%)
Query: 59 CVAVAERMIALGTHAGTVHILDFLGNQ---VKEFPAHTAAVNDLSFDVDGEYVGSCSDDG 115
C + ++A+GT G V + F ++ V HT +V D+ F+ DG+ + S + D
Sbjct: 143 CFHPDQDLLAVGTTTGDVIVYKFTNDECTIVNTHETHTKSVRDVEFNADGDLLISTARDR 202
Query: 116 SVVINSLFTDEKMKF--DYH-RPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKW-LG 171
S+++ + T + +F D H P+ +S+ ++T F G G L L W L
Sbjct: 203 SIMVTDVETGKLKRFWDDAHEEPVYTMSMITEHT------FATGDDGGVLKL----WDLR 252
Query: 172 YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERP------RGSPRP 225
+D V E V + + +I N+ + + D +T I P + P
Sbjct: 253 QKDPVFKLKE----VEDFISCII--TNEQKKYLLMTSGDGYLTTINIPQRKMYVQSEPYE 306
Query: 226 ELLLPHLVWQDDTLLVIG 243
E L V++ D+ LV+G
Sbjct: 307 EELTCMGVFRRDSKLVVG 324
>sp|B3M1G0|WDR55_DROAN WD repeat-containing protein 55 homolog OS=Drosophila ananassae
GN=GF18399 PE=3 SV=1
Length = 481
Score = 38.1 bits (87), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 65 RMIALGTHAGTVHILDFL--GNQ-VKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINS 121
+IAL T G VH+ ++ GN+ ++ H+ A D+ F DG + +CS D V++
Sbjct: 159 NIIALATIIGDVHLYEYANEGNKLIRTIEVHSKACRDVEFTEDGRNLLTCSKDKCVMVTD 218
Query: 122 LFTDEKMK 129
+ T EK+K
Sbjct: 219 MET-EKLK 225
>sp|B4QTL6|WDR55_DROSI WD repeat-containing protein 55 homolog OS=Drosophila simulans
GN=GD18783 PE=3 SV=1
Length = 498
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 59 CVAVAERMIALGTHAGTVHILDF---LGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDG 115
C +IAL T G VH+ ++ ++ H+ A D+ F DG ++ +CS D
Sbjct: 163 CFHPDRDIIALATIIGDVHLYEYDNEANKLLRTIEVHSKACRDVEFTEDGRFLLTCSKDK 222
Query: 116 SVVINSLFTDEKMK 129
V++ + T EK+K
Sbjct: 223 CVMVTDMET-EKLK 235
>sp|B3P4F8|WDR55_DROER WD repeat-containing protein 55 homolog OS=Drosophila erecta
GN=GG18443 PE=3 SV=1
Length = 498
Score = 37.4 bits (85), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 59 CVAVAERMIALGTHAGTVHILDF---LGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDG 115
C +IAL T G VH+ ++ ++ H+ A D+ F DG ++ +CS D
Sbjct: 164 CFHPDRDIIALATIIGDVHLYEYDNEANKLLRTIEVHSKACRDVEFTEDGRFLLTCSKDK 223
Query: 116 SVVINSLFTDEKMK 129
V++ + T EK+K
Sbjct: 224 CVMVTDMET-EKLK 236
>sp|B4JSW8|WDR55_DROGR WD repeat-containing protein 55 homolog OS=Drosophila grimshawi
GN=GH23127 PE=3 SV=1
Length = 503
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 23 DEDEEEEEEEEEEEPRLKYQRMGGSLPSLLANDAAS--CVAVAERMIALGTHAGTVHILD 80
DED+E +E +K R + P + D + C +IAL T G VH+ +
Sbjct: 127 DEDDETDETVRAMIAAIKKTR--SAPPEIKLEDFITDICFHPERDIIALATIIGDVHLYE 184
Query: 81 FLGNQ----VKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMK 129
+ GN+ ++ H A D+ F DG + +CS D V++ + T EK+K
Sbjct: 185 Y-GNEENKLLRTIEVHAKACRDVEFTEDGRSLITCSKDKCVMVTDMET-EKLK 235
>sp|Q8T088|WDR55_DROME WD repeat-containing protein 55 homolog OS=Drosophila melanogaster
GN=CG14722 PE=2 SV=1
Length = 498
Score = 37.4 bits (85), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 59 CVAVAERMIALGTHAGTVHILDF---LGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDG 115
C +IAL T G VH+ ++ ++ H+ A D+ F DG ++ +CS D
Sbjct: 163 CFHPDRDIIALATIIGDVHLYEYDNEANKLLRTIEVHSKACRDVEFTEDGRFLLTCSKDK 222
Query: 116 SVVINSLFTDEKMK 129
V++ + T EK+K
Sbjct: 223 CVMVTDMET-EKLK 235
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 292,091,763
Number of Sequences: 539616
Number of extensions: 13338822
Number of successful extensions: 186923
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 134602
Number of HSP's gapped (non-prelim): 31090
length of query: 724
length of database: 191,569,459
effective HSP length: 125
effective length of query: 599
effective length of database: 124,117,459
effective search space: 74346357941
effective search space used: 74346357941
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)