Query 004918
Match_columns 724
No_of_seqs 559 out of 4605
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 09:45:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/004918.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/004918hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwc_A Peroxisomal bifunctiona 100.0 6E-134 2E-138 1166.7 72.3 688 8-713 25-731 (742)
2 2wtb_A MFP2, fatty acid multif 100.0 1E-125 4E-130 1105.4 73.5 706 1-713 4-717 (725)
3 1wdk_A Fatty oxidation complex 100.0 5E-125 2E-129 1099.8 67.5 696 3-712 5-715 (715)
4 3k6j_A Protein F01G10.3, confi 100.0 3.6E-79 1.2E-83 670.4 40.0 395 304-711 50-448 (460)
5 1zcj_A Peroxisomal bifunctiona 100.0 1E-74 3.5E-79 646.1 42.3 433 275-713 1-452 (463)
6 3mog_A Probable 3-hydroxybutyr 100.0 3E-74 1E-78 641.8 42.8 404 306-713 3-476 (483)
7 3hrx_A Probable enoyl-COA hydr 100.0 2.5E-53 8.5E-58 437.3 28.0 250 6-295 2-252 (254)
8 4fzw_C 1,2-epoxyphenylacetyl-C 100.0 5.2E-53 1.8E-57 438.3 27.5 254 4-295 15-272 (274)
9 3ado_A Lambda-crystallin; L-gu 100.0 3.9E-53 1.3E-57 444.2 24.9 240 307-546 5-252 (319)
10 4fzw_A 2,3-dehydroadipyl-COA h 100.0 8.3E-53 2.8E-57 433.3 25.2 250 5-295 6-256 (258)
11 1zej_A HBD-9, 3-hydroxyacyl-CO 100.0 1E-52 3.4E-57 437.9 24.9 257 308-586 12-273 (293)
12 4e12_A Diketoreductase; oxidor 100.0 2.8E-52 9.6E-57 437.4 25.4 275 307-584 3-283 (283)
13 3pea_A Enoyl-COA hydratase/iso 100.0 1.1E-51 3.6E-56 426.1 25.1 254 3-294 5-258 (261)
14 3kqf_A Enoyl-COA hydratase/iso 100.0 1.3E-51 4.4E-56 426.4 25.7 256 1-295 5-263 (265)
15 1f0y_A HCDH, L-3-hydroxyacyl-C 100.0 9.2E-51 3.1E-55 430.3 32.7 283 303-585 10-302 (302)
16 3i47_A Enoyl COA hydratase/iso 100.0 2.1E-51 7.1E-56 424.9 25.3 257 1-296 1-261 (268)
17 3hin_A Putative 3-hydroxybutyr 100.0 1E-51 3.5E-56 428.1 22.2 255 1-296 13-268 (275)
18 3moy_A Probable enoyl-COA hydr 100.0 2.3E-51 7.9E-56 423.7 24.6 254 1-295 6-261 (263)
19 3h81_A Enoyl-COA hydratase ECH 100.0 3.5E-51 1.2E-55 424.7 24.6 254 1-295 22-276 (278)
20 3gow_A PAAG, probable enoyl-CO 100.0 1.9E-50 6.6E-55 415.3 27.8 250 6-295 2-252 (254)
21 3fdu_A Putative enoyl-COA hydr 100.0 1.9E-50 6.4E-55 417.6 25.4 253 1-296 1-258 (266)
22 3swx_A Probable enoyl-COA hydr 100.0 8E-51 2.7E-55 420.7 22.6 256 1-295 5-263 (265)
23 3lke_A Enoyl-COA hydratase; ny 100.0 6.1E-51 2.1E-55 420.9 21.5 256 1-294 1-262 (263)
24 3myb_A Enoyl-COA hydratase; ss 100.0 2.5E-50 8.5E-55 420.5 25.9 256 1-296 22-280 (286)
25 3p5m_A Enoyl-COA hydratase/iso 100.0 3.2E-50 1.1E-54 413.6 26.2 246 4-294 6-252 (255)
26 3g64_A Putative enoyl-COA hydr 100.0 4.7E-50 1.6E-54 418.1 27.2 255 3-295 16-275 (279)
27 1nzy_A Dehalogenase, 4-chlorob 100.0 2.4E-50 8.1E-55 418.4 24.3 257 1-296 1-262 (269)
28 3sll_A Probable enoyl-COA hydr 100.0 4.5E-50 1.5E-54 419.7 26.4 254 4-295 24-287 (290)
29 3qmj_A Enoyl-COA hydratase, EC 100.0 1E-50 3.5E-55 418.0 20.8 251 3-291 5-256 (256)
30 3rsi_A Putative enoyl-COA hydr 100.0 8.6E-50 2.9E-54 413.0 26.8 253 1-295 5-263 (265)
31 2ppy_A Enoyl-COA hydratase; be 100.0 9.7E-50 3.3E-54 412.9 27.2 252 3-294 8-262 (265)
32 3qxz_A Enoyl-COA hydratase/iso 100.0 1.4E-50 4.8E-55 418.6 20.7 253 3-295 6-262 (265)
33 2ej5_A Enoyl-COA hydratase sub 100.0 7.2E-50 2.5E-54 411.9 25.4 250 4-294 3-254 (257)
34 3gkb_A Putative enoyl-COA hydr 100.0 4.1E-50 1.4E-54 418.7 23.5 248 3-291 8-261 (287)
35 2pbp_A Enoyl-COA hydratase sub 100.0 1.1E-49 3.7E-54 410.9 25.7 253 1-294 1-255 (258)
36 4hdt_A 3-hydroxyisobutyryl-COA 100.0 1.3E-49 4.5E-54 426.1 26.9 291 3-296 8-324 (353)
37 3qre_A Enoyl-COA hydratase, EC 100.0 1.1E-50 3.7E-55 425.3 17.6 256 3-296 28-293 (298)
38 1ef8_A Methylmalonyl COA decar 100.0 1.3E-49 4.3E-54 411.1 25.1 253 1-294 1-258 (261)
39 3trr_A Probable enoyl-COA hydr 100.0 1.2E-49 3.9E-54 409.4 24.3 249 1-295 5-254 (256)
40 3tlf_A Enoyl-COA hydratase/iso 100.0 7.6E-50 2.6E-54 415.7 23.0 253 4-295 11-272 (274)
41 2vx2_A Enoyl-COA hydratase dom 100.0 1.9E-49 6.4E-54 414.0 24.9 252 4-294 33-285 (287)
42 3r9q_A Enoyl-COA hydratase/iso 100.0 7.9E-50 2.7E-54 411.7 21.4 247 5-294 12-259 (262)
43 1dci_A Dienoyl-COA isomerase; 100.0 5.2E-49 1.8E-53 409.9 27.3 256 2-294 1-272 (275)
44 1wz8_A Enoyl-COA hydratase; ly 100.0 1.5E-49 5.2E-54 410.9 23.1 253 3-294 9-263 (264)
45 3r9t_A ECHA1_1; ssgcid, seattl 100.0 1.3E-49 4.4E-54 411.6 21.7 253 3-295 8-265 (267)
46 4f47_A Enoyl-COA hydratase ECH 100.0 1.3E-49 4.4E-54 414.6 21.9 253 4-295 20-276 (278)
47 3hp0_A Putative polyketide bio 100.0 3.8E-49 1.3E-53 407.4 25.0 253 1-296 4-258 (267)
48 4eml_A Naphthoate synthase; 1, 100.0 3.4E-49 1.2E-53 409.9 24.3 254 3-295 9-269 (275)
49 3qxi_A Enoyl-COA hydratase ECH 100.0 4.3E-49 1.5E-53 407.2 23.2 250 2-295 13-263 (265)
50 2f6q_A Peroxisomal 3,2-trans-e 100.0 3.7E-49 1.3E-53 411.0 22.7 252 2-292 24-279 (280)
51 3qk8_A Enoyl-COA hydratase ECH 100.0 1.4E-49 4.7E-54 412.5 19.3 252 3-295 12-267 (272)
52 1sg4_A 3,2-trans-enoyl-COA iso 100.0 1.3E-49 4.6E-54 410.4 18.8 250 6-294 7-259 (260)
53 2uzf_A Naphthoate synthase; ly 100.0 1.4E-48 4.9E-53 405.4 26.4 252 3-295 12-267 (273)
54 3rrv_A Enoyl-COA hydratase/iso 100.0 5.9E-49 2E-53 407.9 22.8 247 4-290 28-276 (276)
55 2j5i_A P-hydroxycinnamoyl COA 100.0 7.3E-49 2.5E-53 408.2 23.3 251 3-290 8-265 (276)
56 3oc7_A Enoyl-COA hydratase; se 100.0 1.5E-48 5.2E-53 404.3 25.4 252 1-294 5-265 (267)
57 3lao_A Enoyl-COA hydratase/iso 100.0 2.3E-49 8E-54 408.1 19.0 247 2-287 10-258 (258)
58 3t89_A 1,4-dihydroxy-2-naphtho 100.0 1.2E-48 4.2E-53 407.9 24.2 257 1-296 24-284 (289)
59 2a7k_A CARB; crotonase, antibi 100.0 5.9E-49 2E-53 403.7 20.4 247 6-291 2-250 (250)
60 2fbm_A Y chromosome chromodoma 100.0 5.7E-49 1.9E-53 410.9 20.3 256 2-296 21-282 (291)
61 2gtr_A CDY-like, chromodomain 100.0 6.6E-49 2.2E-53 405.7 20.5 252 3-293 4-260 (261)
62 3h0u_A Putative enoyl-COA hydr 100.0 2.2E-48 7.6E-53 406.0 24.4 247 3-288 7-257 (289)
63 1mj3_A Enoyl-COA hydratase, mi 100.0 2E-48 6.8E-53 401.7 23.5 253 2-294 2-257 (260)
64 1uiy_A Enoyl-COA hydratase; ly 100.0 1.4E-48 4.8E-53 401.6 22.3 248 6-293 2-252 (253)
65 3t8b_A 1,4-dihydroxy-2-naphtho 100.0 1.1E-48 3.8E-53 414.4 21.1 256 3-296 54-329 (334)
66 3l3s_A Enoyl-COA hydratase/iso 100.0 2.5E-48 8.5E-53 401.3 23.0 250 2-289 4-258 (263)
67 3pe8_A Enoyl-COA hydratase; em 100.0 1.2E-48 4.1E-53 401.2 19.4 244 3-294 8-255 (256)
68 4di1_A Enoyl-COA hydratase ECH 100.0 5.6E-48 1.9E-52 400.1 22.2 243 1-293 22-264 (277)
69 3he2_A Enoyl-COA hydratase ECH 100.0 6.3E-48 2.1E-52 396.6 21.1 241 3-294 20-261 (264)
70 1hzd_A AUH, AU-binding protein 100.0 1.5E-47 5.1E-52 397.5 20.7 252 5-294 9-269 (272)
71 3bpt_A 3-hydroxyisobutyryl-COA 100.0 1E-46 3.4E-51 406.1 24.1 289 3-295 5-330 (363)
72 3isa_A Putative enoyl-COA hydr 100.0 4.7E-47 1.6E-51 389.7 20.4 242 5-296 8-250 (254)
73 2q35_A CURF; crotonase, lyase; 100.0 4E-47 1.4E-51 387.7 18.6 237 7-287 6-243 (243)
74 3ju1_A Enoyl-COA hydratase/iso 100.0 6.2E-47 2.1E-51 411.6 18.6 286 4-296 42-376 (407)
75 1pjh_A Enoyl-COA isomerase; EC 100.0 1.8E-46 6E-51 391.4 21.0 243 1-293 6-266 (280)
76 3r6h_A Enoyl-COA hydratase, EC 100.0 6.5E-46 2.2E-50 376.3 18.8 230 1-271 3-232 (233)
77 2j5g_A ALR4455 protein; enzyme 100.0 8.7E-46 3E-50 381.1 19.1 238 3-290 22-262 (263)
78 3ot6_A Enoyl-COA hydratase/iso 100.0 1.4E-45 4.8E-50 373.6 16.7 225 4-270 6-231 (232)
79 3m6n_A RPFF protein; enoyl-COA 100.0 2.4E-44 8.4E-49 378.7 24.7 255 3-295 29-300 (305)
80 3njd_A Enoyl-COA hydratase; ss 100.0 1.4E-43 4.7E-48 377.5 26.8 204 1-209 32-265 (333)
81 1szo_A 6-oxocamphor hydrolase; 100.0 4.2E-44 1.4E-48 367.9 19.6 237 4-291 16-254 (257)
82 2np9_A DPGC; protein inhibitor 100.0 6.3E-44 2.2E-48 386.9 19.3 246 4-292 167-440 (440)
83 2dpo_A L-gulonate 3-dehydrogen 100.0 5.8E-43 2E-47 370.2 25.8 245 306-551 4-256 (319)
84 3t3w_A Enoyl-COA hydratase; ss 100.0 2.7E-43 9.2E-48 366.6 21.1 205 1-209 17-226 (279)
85 2w3p_A Benzoyl-COA-dihydrodiol 100.0 1.9E-39 6.6E-44 353.4 15.5 275 3-293 20-328 (556)
86 3mog_A Probable 3-hydroxybutyr 99.9 1.9E-22 6.6E-27 224.5 16.6 148 422-575 324-474 (483)
87 3ctv_A HBD-10, 3-hydroxyacyl-C 99.9 1.8E-23 6.1E-28 185.6 4.3 103 478-580 3-109 (110)
88 3bf0_A Protease 4; bacterial, 99.8 3.1E-20 1.1E-24 212.1 7.0 168 12-197 300-515 (593)
89 2ewd_A Lactate dehydrogenase,; 99.8 7.3E-20 2.5E-24 194.2 8.3 204 309-548 5-238 (317)
90 3rst_A Signal peptide peptidas 99.8 1.8E-18 6.3E-23 175.3 14.6 167 12-197 2-224 (240)
91 3tri_A Pyrroline-5-carboxylate 99.8 3.9E-18 1.3E-22 177.6 16.6 189 308-522 3-206 (280)
92 3ctv_A HBD-10, 3-hydroxyacyl-C 99.8 7.9E-19 2.7E-23 155.6 6.8 84 619-706 15-99 (110)
93 3viv_A 441AA long hypothetical 99.7 1E-17 3.5E-22 166.9 14.7 148 12-186 7-174 (230)
94 3d1l_A Putative NADP oxidoredu 99.7 2.3E-17 7.7E-22 170.7 14.1 211 309-549 11-247 (266)
95 3gt0_A Pyrroline-5-carboxylate 99.7 1.1E-16 3.6E-21 163.8 14.6 188 309-522 3-204 (247)
96 3ggo_A Prephenate dehydrogenas 99.7 4.3E-16 1.5E-20 164.6 18.8 166 306-497 31-215 (314)
97 2h78_A Hibadh, 3-hydroxyisobut 99.7 1.3E-16 4.6E-21 168.1 14.7 191 307-526 2-213 (302)
98 3obb_A Probable 3-hydroxyisobu 99.7 1.2E-16 4.1E-21 167.4 12.0 187 308-526 3-213 (300)
99 3doj_A AT3G25530, dehydrogenas 99.6 1.7E-16 5.9E-21 167.8 9.6 191 306-525 19-230 (310)
100 4gbj_A 6-phosphogluconate dehy 99.6 1.1E-16 3.8E-21 167.8 7.4 185 309-525 6-213 (297)
101 3g0o_A 3-hydroxyisobutyrate de 99.6 6E-16 2.1E-20 163.1 13.0 191 308-525 7-218 (303)
102 3qsg_A NAD-binding phosphogluc 99.6 2.7E-16 9.1E-21 166.4 8.7 188 306-525 22-231 (312)
103 3qha_A Putative oxidoreductase 99.6 6.5E-16 2.2E-20 162.2 11.5 184 309-522 16-222 (296)
104 3pef_A 6-phosphogluconate dehy 99.6 5.4E-16 1.8E-20 162.2 10.2 187 309-525 2-210 (287)
105 3pdu_A 3-hydroxyisobutyrate de 99.6 1.8E-16 6.1E-21 165.9 5.7 186 308-525 1-210 (287)
106 2i76_A Hypothetical protein; N 99.6 9.6E-16 3.3E-20 159.3 11.0 210 309-554 3-240 (276)
107 4dll_A 2-hydroxy-3-oxopropiona 99.6 2.4E-15 8.2E-20 159.7 12.7 185 307-525 30-238 (320)
108 3c24_A Putative oxidoreductase 99.6 1.2E-14 4E-19 152.0 16.2 189 307-522 10-228 (286)
109 3dfu_A Uncharacterized protein 99.6 2.2E-15 7.5E-20 150.2 10.0 159 307-518 5-173 (232)
110 2izz_A Pyrroline-5-carboxylate 99.6 2.6E-14 8.7E-19 151.9 15.3 188 308-522 22-228 (322)
111 1zej_A HBD-9, 3-hydroxyacyl-CO 99.6 1.5E-15 5E-20 157.9 4.7 93 622-716 174-274 (293)
112 1f0y_A HCDH, L-3-hydroxyacyl-C 99.5 8.7E-15 3E-19 154.1 9.7 90 620-713 203-301 (302)
113 2y0c_A BCEC, UDP-glucose dehyd 99.5 2.7E-14 9.1E-19 159.2 12.6 205 308-522 8-257 (478)
114 4ezb_A Uncharacterized conserv 99.5 1.7E-13 5.9E-18 145.0 17.6 193 308-525 24-233 (317)
115 3ktd_A Prephenate dehydrogenas 99.5 3.2E-14 1.1E-18 151.1 11.2 160 307-494 7-194 (341)
116 1yqg_A Pyrroline-5-carboxylate 99.5 2.3E-13 7.9E-18 140.2 17.3 148 310-487 2-152 (263)
117 3l6d_A Putative oxidoreductase 99.5 4E-14 1.4E-18 149.3 11.8 187 307-522 8-211 (306)
118 3g79_A NDP-N-acetyl-D-galactos 99.5 5.7E-14 2E-18 155.3 13.4 203 307-522 17-270 (478)
119 2uyy_A N-PAC protein; long-cha 99.5 2.7E-14 9.2E-19 151.4 9.7 187 307-522 29-235 (316)
120 3b1f_A Putative prephenate deh 99.5 1.4E-13 4.8E-18 144.0 14.2 159 306-488 4-181 (290)
121 4e21_A 6-phosphogluconate dehy 99.5 5.1E-14 1.8E-18 150.9 9.7 174 308-511 22-233 (358)
122 2f9y_B Acetyl-coenzyme A carbo 99.5 9.3E-14 3.2E-18 144.4 10.7 156 16-204 121-281 (304)
123 1y7o_A ATP-dependent CLP prote 99.5 1.7E-13 5.8E-18 136.2 12.0 140 27-188 53-214 (218)
124 3cky_A 2-hydroxymethyl glutara 99.5 1.4E-13 4.9E-18 144.7 11.6 186 309-522 5-209 (301)
125 2ahr_A Putative pyrroline carb 99.5 6.1E-13 2.1E-17 136.7 15.3 185 308-522 3-197 (259)
126 1vpd_A Tartronate semialdehyde 99.5 3.3E-13 1.1E-17 141.8 13.1 184 309-522 6-210 (299)
127 4e12_A Diketoreductase; oxidor 99.4 2.2E-14 7.4E-19 149.6 3.8 88 619-713 188-283 (283)
128 2f1k_A Prephenate dehydrogenas 99.4 1.6E-12 5.5E-17 135.1 17.9 162 310-496 2-176 (279)
129 2g5c_A Prephenate dehydrogenas 99.4 1.2E-12 4E-17 136.3 16.9 155 308-488 1-173 (281)
130 2ew2_A 2-dehydropantoate 2-red 99.4 1.8E-12 6.2E-17 136.9 18.6 168 308-489 3-184 (316)
131 1zcj_A Peroxisomal bifunctiona 99.4 3E-13 1E-17 150.4 10.9 108 463-572 331-446 (463)
132 2gf2_A Hibadh, 3-hydroxyisobut 99.4 1.2E-13 4.2E-18 144.8 7.3 181 310-522 2-205 (296)
133 2q3e_A UDP-glucose 6-dehydroge 99.4 5.2E-13 1.8E-17 148.9 12.4 202 308-522 5-256 (467)
134 4a7p_A UDP-glucose dehydrogena 99.4 1.4E-12 4.8E-17 143.4 15.6 203 309-522 9-251 (446)
135 3gg2_A Sugar dehydrogenase, UD 99.4 2.8E-12 9.7E-17 141.7 18.1 203 309-522 3-247 (450)
136 3ojo_A CAP5O; rossmann fold, c 99.4 9E-13 3.1E-17 143.9 13.8 200 308-522 11-250 (431)
137 1yb4_A Tartronic semialdehyde 99.4 2.3E-13 7.7E-18 142.7 8.5 182 308-522 3-207 (295)
138 2rcy_A Pyrroline carboxylate r 99.4 9.1E-13 3.1E-17 135.6 12.9 147 308-488 4-156 (262)
139 3k96_A Glycerol-3-phosphate de 99.4 1.1E-12 3.7E-17 140.7 13.6 169 306-491 27-208 (356)
140 4huj_A Uncharacterized protein 99.4 3.1E-13 1E-17 135.4 8.3 154 306-488 21-198 (220)
141 3pid_A UDP-glucose 6-dehydroge 99.4 2.8E-12 9.5E-17 139.7 16.0 195 307-522 35-268 (432)
142 1mv8_A GMD, GDP-mannose 6-dehy 99.4 9.6E-13 3.3E-17 145.6 12.4 200 310-522 2-245 (436)
143 4gwg_A 6-phosphogluconate dehy 99.4 4E-13 1.4E-17 148.8 8.1 192 307-522 3-221 (484)
144 2o3j_A UDP-glucose 6-dehydroge 99.4 2.6E-12 9E-17 143.5 14.1 201 306-522 7-262 (481)
145 3k6j_A Protein F01G10.3, confi 99.4 7.7E-13 2.6E-17 145.1 9.3 86 619-716 232-325 (460)
146 2pv7_A T-protein [includes: ch 99.4 2E-12 6.9E-17 135.6 12.0 140 307-488 20-166 (298)
147 2zyd_A 6-phosphogluconate dehy 99.4 2.5E-12 8.6E-17 143.3 13.4 193 305-522 12-231 (480)
148 2p4q_A 6-phosphogluconate dehy 99.4 1.7E-12 5.9E-17 145.0 11.2 191 308-522 10-226 (497)
149 2f9i_A Acetyl-coenzyme A carbo 99.3 6.1E-12 2.1E-16 131.9 13.9 138 26-186 139-276 (327)
150 2iz1_A 6-phosphogluconate dehy 99.3 7.5E-12 2.6E-16 139.6 15.0 190 308-522 5-222 (474)
151 2cvz_A Dehydrogenase, 3-hydrox 99.3 2.9E-12 9.9E-17 133.7 10.4 184 308-522 1-200 (289)
152 1np3_A Ketol-acid reductoisome 99.3 4.3E-12 1.5E-16 135.4 10.6 182 308-518 16-223 (338)
153 1jay_A Coenzyme F420H2:NADP+ o 99.3 8.2E-12 2.8E-16 124.1 11.3 156 310-488 2-181 (212)
154 2f9y_A Acetyl-COA carboxylase, 99.3 1.1E-11 3.7E-16 130.4 12.6 138 26-186 153-290 (339)
155 1i36_A Conserved hypothetical 99.3 1.7E-11 5.8E-16 126.2 13.6 173 310-522 2-193 (264)
156 2wtb_A MFP2, fatty acid multif 99.3 2.8E-12 9.6E-17 149.7 8.0 89 620-715 494-590 (725)
157 1wdk_A Fatty oxidation complex 99.3 2E-12 6.7E-17 150.9 5.8 89 620-714 496-593 (715)
158 3dtt_A NADP oxidoreductase; st 99.3 3.1E-11 1E-15 122.9 13.2 165 307-488 18-213 (245)
159 2hjr_A Malate dehydrogenase; m 99.2 8.5E-12 2.9E-16 132.3 8.5 122 309-444 15-155 (328)
160 2raf_A Putative dinucleotide-b 99.2 2.1E-11 7.1E-16 121.0 10.1 135 307-488 18-176 (209)
161 1pgj_A 6PGDH, 6-PGDH, 6-phosph 99.2 4.5E-11 1.6E-15 133.3 13.1 193 310-523 3-221 (478)
162 2pgd_A 6-phosphogluconate dehy 99.2 3E-11 1E-15 135.1 11.4 191 309-523 3-220 (482)
163 3vtf_A UDP-glucose 6-dehydroge 99.2 1.5E-10 5.1E-15 126.1 15.6 204 307-527 20-271 (444)
164 2vns_A Metalloreductase steap3 99.2 1.4E-11 4.6E-16 122.9 6.4 149 307-488 27-194 (215)
165 1evy_A Glycerol-3-phosphate de 99.2 3.3E-11 1.1E-15 130.3 9.9 168 308-490 15-201 (366)
166 1t2d_A LDH-P, L-lactate dehydr 99.2 2.7E-11 9.2E-16 128.0 8.2 123 308-444 4-150 (322)
167 3zwc_A Peroxisomal bifunctiona 99.1 6.7E-11 2.3E-15 137.4 9.9 95 492-586 637-739 (742)
168 1pzg_A LDH, lactate dehydrogen 99.1 3.9E-11 1.3E-15 127.3 7.3 123 308-444 9-156 (331)
169 1x0v_A GPD-C, GPDH-C, glycerol 99.1 5.4E-11 1.8E-15 128.0 8.2 171 307-491 7-201 (354)
170 1ks9_A KPA reductase;, 2-dehyd 99.1 5.2E-11 1.8E-15 124.2 7.2 168 310-499 2-179 (291)
171 1dlj_A UDP-glucose dehydrogena 99.1 6.6E-10 2.3E-14 121.3 15.8 196 310-522 2-239 (402)
172 1z82_A Glycerol-3-phosphate de 99.1 5.4E-10 1.8E-14 119.2 13.0 159 309-489 15-181 (335)
173 1a5z_A L-lactate dehydrogenase 99.1 1.1E-10 3.8E-15 123.4 7.2 158 309-503 1-181 (319)
174 1yj8_A Glycerol-3-phosphate de 99.1 2.1E-10 7.2E-15 124.3 9.1 170 308-491 21-218 (375)
175 3fr7_A Putative ketol-acid red 99.1 2.5E-10 8.6E-15 123.5 9.4 155 308-484 54-232 (525)
176 2qyt_A 2-dehydropantoate 2-red 99.0 3.9E-10 1.3E-14 119.1 10.2 169 308-490 8-195 (317)
177 3hwr_A 2-dehydropantoate 2-red 99.0 1.4E-09 4.6E-14 115.1 13.5 174 307-500 18-201 (318)
178 2i6t_A Ubiquitin-conjugating e 99.0 1.6E-10 5.5E-15 120.8 6.1 122 304-444 10-149 (303)
179 1txg_A Glycerol-3-phosphate de 99.0 4.5E-10 1.5E-14 119.6 9.7 162 310-489 2-182 (335)
180 1ur5_A Malate dehydrogenase; o 98.9 5.9E-10 2E-14 117.2 6.8 99 309-420 3-116 (309)
181 2yjz_A Metalloreductase steap4 98.5 9.6E-11 3.3E-15 115.3 0.0 148 309-488 20-182 (201)
182 3ghy_A Ketopantoate reductase 98.9 4.2E-09 1.4E-13 112.3 12.3 170 308-492 3-202 (335)
183 3hn2_A 2-dehydropantoate 2-red 98.9 1.2E-08 4.1E-13 107.5 14.9 176 309-500 3-190 (312)
184 2cby_A ATP-dependent CLP prote 98.9 8E-09 2.7E-13 101.8 11.2 141 27-193 35-200 (208)
185 2v6b_A L-LDH, L-lactate dehydr 98.9 1.8E-09 6.2E-14 113.2 6.5 120 309-444 1-138 (304)
186 3tl2_A Malate dehydrogenase; c 98.8 7.7E-09 2.6E-13 108.5 9.6 107 304-423 4-127 (315)
187 3i83_A 2-dehydropantoate 2-red 98.8 2E-08 7E-13 106.2 11.9 174 309-497 3-189 (320)
188 2d4a_B Malate dehydrogenase; a 98.8 9.5E-09 3.2E-13 107.8 8.8 120 310-444 1-140 (308)
189 3gvi_A Malate dehydrogenase; N 98.8 1E-08 3.6E-13 107.8 8.9 103 306-421 5-122 (324)
190 3ado_A Lambda-crystallin; L-gu 98.8 6.3E-09 2.2E-13 108.9 6.6 92 619-714 190-288 (319)
191 3ldh_A Lactate dehydrogenase; 98.8 7.6E-09 2.6E-13 108.6 7.1 101 307-421 20-136 (330)
192 3p7m_A Malate dehydrogenase; p 98.7 1.3E-08 4.4E-13 107.1 8.2 126 306-444 3-146 (321)
193 1hyh_A L-hicdh, L-2-hydroxyiso 98.7 2.6E-08 9E-13 104.7 10.4 122 308-444 1-146 (309)
194 2gcg_A Glyoxylate reductase/hy 98.7 5.5E-09 1.9E-13 110.8 4.4 117 309-450 156-276 (330)
195 2w2k_A D-mandelate dehydrogena 98.7 7.8E-09 2.7E-13 110.4 5.0 117 309-449 164-285 (348)
196 4fgw_A Glycerol-3-phosphate de 98.7 5.3E-09 1.8E-13 112.2 3.3 109 309-427 35-155 (391)
197 1guz_A Malate dehydrogenase; o 98.7 7E-08 2.4E-12 101.5 11.5 99 309-420 1-115 (310)
198 1ldn_A L-lactate dehydrogenase 98.7 1.7E-08 5.8E-13 106.4 6.2 122 307-444 5-147 (316)
199 1lld_A L-lactate dehydrogenase 98.6 7.4E-08 2.5E-12 101.8 10.6 107 308-428 7-129 (319)
200 2dbq_A Glyoxylate reductase; D 98.6 6.4E-09 2.2E-13 110.5 2.1 115 308-448 150-268 (334)
201 1obb_A Maltase, alpha-glucosid 98.6 9.4E-08 3.2E-12 105.4 11.1 77 308-396 3-86 (480)
202 1oju_A MDH, malate dehydrogena 98.6 7.9E-08 2.7E-12 99.8 9.7 102 309-423 1-118 (294)
203 3ba1_A HPPR, hydroxyphenylpyru 98.6 6.7E-09 2.3E-13 109.9 1.6 111 309-448 165-279 (333)
204 3c7a_A Octopine dehydrogenase; 98.6 4.1E-08 1.4E-12 107.3 7.9 107 309-428 3-121 (404)
205 2d0i_A Dehydrogenase; structur 98.6 1.6E-08 5.6E-13 107.2 3.3 113 309-448 147-263 (333)
206 1bg6_A N-(1-D-carboxylethyl)-L 98.6 1.3E-07 4.4E-12 101.5 9.6 103 308-422 4-108 (359)
207 1u8x_X Maltose-6'-phosphate gl 98.5 2.8E-07 9.5E-12 101.7 10.0 123 309-444 29-193 (472)
208 3ego_A Probable 2-dehydropanto 98.5 4.8E-07 1.7E-11 94.9 10.6 115 309-442 3-118 (307)
209 3gvx_A Glycerate dehydrogenase 98.5 8.3E-08 2.8E-12 99.3 4.5 124 309-461 123-255 (290)
210 3nep_X Malate dehydrogenase; h 98.4 2.7E-07 9.2E-12 96.6 8.3 102 309-423 1-118 (314)
211 3fef_A Putative glucosidase LP 98.4 1.6E-07 5.6E-12 102.6 6.8 73 308-396 5-84 (450)
212 3pqe_A L-LDH, L-lactate dehydr 98.4 2E-07 6.7E-12 98.2 7.1 103 306-423 3-122 (326)
213 4aj2_A L-lactate dehydrogenase 98.4 1.9E-07 6.6E-12 98.3 6.9 102 306-421 17-134 (331)
214 3g17_A Similar to 2-dehydropan 98.4 4.6E-08 1.6E-12 102.1 2.0 163 309-500 3-173 (294)
215 1ygy_A PGDH, D-3-phosphoglycer 98.4 8.5E-08 2.9E-12 108.1 3.1 148 309-483 143-308 (529)
216 1gdh_A D-glycerate dehydrogena 98.4 2.9E-07 9.9E-12 97.0 7.0 138 309-471 147-297 (320)
217 2x0j_A Malate dehydrogenase; o 98.3 1.2E-06 4.1E-11 90.6 8.8 103 309-424 1-119 (294)
218 2f6i_A ATP-dependent CLP prote 98.3 3.1E-06 1.1E-10 83.4 11.3 136 27-186 47-203 (215)
219 3evt_A Phosphoglycerate dehydr 98.3 3.8E-07 1.3E-11 95.9 4.8 127 309-461 138-276 (324)
220 3qwd_A ATP-dependent CLP prote 98.3 3.5E-06 1.2E-10 82.1 11.1 137 27-187 35-193 (203)
221 1wwk_A Phosphoglycerate dehydr 98.3 9.2E-07 3.2E-11 92.6 7.4 137 309-471 143-292 (307)
222 2w3p_A Benzoyl-COA-dihydrodiol 98.3 5.1E-06 1.8E-10 91.2 13.4 201 3-211 265-500 (556)
223 3jtm_A Formate dehydrogenase, 98.3 5.9E-07 2E-11 95.4 5.8 104 309-436 165-271 (351)
224 1qp8_A Formate dehydrogenase; 98.2 1.1E-06 3.7E-11 91.8 7.0 125 309-463 125-262 (303)
225 2dpo_A L-gulonate 3-dehydrogen 98.2 1.3E-06 4.3E-11 91.9 7.3 65 619-685 190-254 (319)
226 1yg6_A ATP-dependent CLP prote 98.2 2E-06 7E-11 83.6 8.1 134 27-186 34-191 (193)
227 4dgs_A Dehydrogenase; structur 98.2 4.2E-07 1.4E-11 96.1 3.4 110 309-447 172-285 (340)
228 3vku_A L-LDH, L-lactate dehydr 98.2 1E-06 3.5E-11 92.5 6.3 101 307-423 8-125 (326)
229 3gg9_A D-3-phosphoglycerate de 98.2 1.3E-06 4.6E-11 92.8 7.2 92 309-425 161-253 (352)
230 3fi9_A Malate dehydrogenase; s 98.2 1E-06 3.5E-11 93.2 6.2 96 307-417 7-120 (343)
231 2ekl_A D-3-phosphoglycerate de 98.2 7.7E-07 2.6E-11 93.4 4.5 102 309-436 143-247 (313)
232 3k5p_A D-3-phosphoglycerate de 98.2 2.2E-06 7.6E-11 92.5 7.9 100 309-436 157-259 (416)
233 1s6y_A 6-phospho-beta-glucosid 98.2 4.9E-06 1.7E-10 91.4 10.5 123 309-444 8-174 (450)
234 3d0o_A L-LDH 1, L-lactate dehy 98.1 5.7E-06 2E-10 87.0 10.2 109 308-432 6-130 (317)
235 2cuk_A Glycerate dehydrogenase 98.1 1.6E-06 5.4E-11 90.9 5.6 125 308-463 144-279 (311)
236 1ez4_A Lactate dehydrogenase; 98.1 2.9E-06 9.8E-11 89.2 7.4 97 309-421 6-119 (318)
237 1sc6_A PGDH, D-3-phosphoglycer 98.1 1.2E-06 4.2E-11 94.9 4.6 100 309-436 146-248 (404)
238 1y6j_A L-lactate dehydrogenase 98.1 1.8E-06 6.1E-11 90.9 5.7 119 308-444 7-147 (318)
239 2nac_A NAD-dependent formate d 98.1 1.5E-06 5.2E-11 93.5 5.1 104 309-436 192-298 (393)
240 2xxj_A L-LDH, L-lactate dehydr 98.1 3.3E-06 1.1E-10 88.5 7.4 98 309-421 1-114 (310)
241 3hg7_A D-isomer specific 2-hyd 98.1 1.1E-06 3.7E-11 92.3 3.5 127 309-461 141-279 (324)
242 2zqz_A L-LDH, L-lactate dehydr 98.1 3.5E-06 1.2E-10 88.9 7.4 98 308-421 9-123 (326)
243 1tg6_A Putative ATP-dependent 98.1 7.9E-06 2.7E-10 82.9 9.4 134 27-186 90-247 (277)
244 4hy3_A Phosphoglycerate oxidor 98.1 5.5E-06 1.9E-10 88.3 8.6 137 309-471 177-325 (365)
245 4g2n_A D-isomer specific 2-hyd 98.1 1.1E-06 3.9E-11 93.0 3.2 101 309-435 174-277 (345)
246 2g76_A 3-PGDH, D-3-phosphoglyc 98.1 1.6E-06 5.6E-11 91.6 4.1 101 309-435 166-269 (335)
247 3llv_A Exopolyphosphatase-rela 98.1 1.7E-05 5.9E-10 72.6 10.5 106 307-430 5-111 (141)
248 2pi1_A D-lactate dehydrogenase 98.1 1.2E-06 4.1E-11 92.6 2.6 101 309-436 142-245 (334)
249 4e5n_A Thermostable phosphite 98.0 1.9E-06 6.6E-11 90.9 3.5 102 309-435 146-250 (330)
250 3pp8_A Glyoxylate/hydroxypyruv 98.0 7.6E-07 2.6E-11 93.3 0.3 101 309-435 140-243 (315)
251 2i99_A MU-crystallin homolog; 98.0 5.8E-06 2E-10 86.8 6.5 89 309-424 136-227 (312)
252 1j4a_A D-LDH, D-lactate dehydr 98.0 2.9E-06 9.8E-11 89.9 3.8 101 309-436 147-250 (333)
253 3p2l_A ATP-dependent CLP prote 98.0 7E-06 2.4E-10 79.9 6.2 134 27-186 38-195 (201)
254 2j6i_A Formate dehydrogenase; 98.0 1.9E-06 6.4E-11 92.3 2.3 104 309-436 165-272 (364)
255 1mx3_A CTBP1, C-terminal bindi 98.0 2.3E-06 7.7E-11 90.9 2.7 102 309-435 169-273 (347)
256 2yq5_A D-isomer specific 2-hyd 98.0 1.3E-06 4.3E-11 92.5 0.7 110 309-446 149-262 (343)
257 1lss_A TRK system potassium up 98.0 5.5E-05 1.9E-09 68.7 11.6 96 309-421 5-101 (140)
258 3oj0_A Glutr, glutamyl-tRNA re 97.9 4.5E-06 1.5E-10 77.0 2.4 69 309-398 22-91 (144)
259 1pix_A Glutaconyl-COA decarbox 97.8 9.5E-05 3.2E-09 83.0 13.0 159 25-203 118-285 (587)
260 3ic5_A Putative saccharopine d 97.8 4.3E-05 1.5E-09 67.1 8.3 40 308-347 5-45 (118)
261 3oet_A Erythronate-4-phosphate 97.8 2.6E-06 8.9E-11 90.9 0.0 111 309-448 120-238 (381)
262 1dxy_A D-2-hydroxyisocaproate 97.8 3.7E-06 1.3E-10 88.9 0.8 100 309-436 146-248 (333)
263 2o4c_A Erythronate-4-phosphate 97.8 4.2E-06 1.5E-10 89.5 0.5 99 309-436 117-222 (380)
264 1o6z_A MDH, malate dehydrogena 97.7 7.3E-05 2.5E-09 78.0 9.1 119 309-444 1-143 (303)
265 3fwz_A Inner membrane protein 97.7 0.0002 6.7E-09 65.5 11.0 40 309-348 8-47 (140)
266 3c85_A Putative glutathione-re 97.7 0.00013 4.5E-09 69.9 10.1 39 309-347 40-79 (183)
267 4gm2_A ATP-dependent CLP prote 97.7 0.00013 4.3E-09 70.8 9.6 142 27-187 36-205 (205)
268 1xdw_A NAD+-dependent (R)-2-hy 97.7 4.8E-06 1.6E-10 88.1 -0.9 100 309-436 147-249 (331)
269 2hmt_A YUAA protein; RCK, KTN, 97.6 9E-05 3.1E-09 67.5 7.2 39 308-346 6-44 (144)
270 1y81_A Conserved hypothetical 97.6 0.0001 3.4E-09 67.4 7.3 81 308-420 14-99 (138)
271 1mld_A Malate dehydrogenase; o 97.6 0.00019 6.4E-09 75.2 10.0 93 310-421 2-115 (314)
272 1up7_A 6-phospho-beta-glucosid 97.6 0.00022 7.5E-09 77.5 10.9 119 308-444 2-163 (417)
273 2g1u_A Hypothetical protein TM 97.6 0.00016 5.6E-09 67.3 8.6 38 309-346 20-57 (155)
274 1smk_A Malate dehydrogenase, g 97.6 0.00011 3.9E-09 77.4 8.1 102 308-430 8-130 (326)
275 2rir_A Dipicolinate synthase, 97.5 8.2E-05 2.8E-09 77.5 6.4 86 309-421 158-244 (300)
276 3d4o_A Dipicolinate synthase s 97.5 9.3E-05 3.2E-09 76.8 6.7 87 309-422 156-243 (293)
277 2hk9_A Shikimate dehydrogenase 97.5 5.9E-05 2E-09 77.6 5.1 67 309-398 130-197 (275)
278 2duw_A Putative COA-binding pr 97.5 0.00011 3.7E-09 67.8 5.4 93 309-435 14-113 (145)
279 3bf0_A Protease 4; bacterial, 97.4 0.00064 2.2E-08 77.4 12.6 144 32-194 71-271 (593)
280 1b8p_A Protein (malate dehydro 97.4 0.00017 5.7E-09 76.2 6.9 99 309-421 6-131 (329)
281 3l4b_C TRKA K+ channel protien 97.4 0.00051 1.8E-08 67.8 9.3 95 309-420 1-97 (218)
282 3u95_A Glycoside hydrolase, fa 97.3 0.00029 9.9E-09 77.9 7.8 75 309-395 1-84 (477)
283 3d64_A Adenosylhomocysteinase; 97.3 0.00011 3.7E-09 81.1 4.2 88 309-425 278-366 (494)
284 1v8b_A Adenosylhomocysteinase; 97.3 8.6E-05 3E-09 81.5 3.4 88 309-425 258-346 (479)
285 1x7d_A Ornithine cyclodeaminas 97.3 0.0003 1E-08 74.7 7.4 95 309-424 130-227 (350)
286 3qy9_A DHPR, dihydrodipicolina 97.3 0.00057 1.9E-08 68.5 8.4 86 307-428 2-88 (243)
287 2d5c_A AROE, shikimate 5-dehyd 97.2 0.00031 1.1E-08 71.6 6.3 64 310-398 118-182 (263)
288 3q2i_A Dehydrogenase; rossmann 97.2 0.0011 3.9E-08 70.5 10.9 98 306-430 11-114 (354)
289 2f9i_B Acetyl-coenzyme A carbo 97.2 0.0056 1.9E-07 62.6 15.4 152 18-199 125-279 (285)
290 3ce6_A Adenosylhomocysteinase; 97.2 0.00038 1.3E-08 76.9 7.2 86 309-423 275-361 (494)
291 3e9m_A Oxidoreductase, GFO/IDH 97.2 0.00087 3E-08 70.7 9.7 101 306-432 3-108 (330)
292 3hhp_A Malate dehydrogenase; M 97.2 0.00047 1.6E-08 71.8 7.4 96 309-422 1-117 (312)
293 1hye_A L-lactate/malate dehydr 97.2 0.0011 3.7E-08 69.4 10.0 98 310-421 2-120 (313)
294 4h7p_A Malate dehydrogenase; s 97.2 0.00033 1.1E-08 73.9 5.6 102 309-424 25-151 (345)
295 1omo_A Alanine dehydrogenase; 97.1 0.00057 1.9E-08 71.8 7.3 69 309-397 126-197 (322)
296 3iav_A Propionyl-COA carboxyla 97.1 0.0086 2.9E-07 66.3 16.7 146 17-200 100-258 (530)
297 3uuw_A Putative oxidoreductase 97.1 0.00092 3.2E-08 69.7 8.7 98 307-431 5-106 (308)
298 3n6r_B Propionyl-COA carboxyla 97.1 0.0054 1.8E-07 67.9 15.0 137 25-201 118-263 (531)
299 3hdj_A Probable ornithine cycl 97.1 0.00035 1.2E-08 73.0 5.3 91 309-425 122-215 (313)
300 3euw_A MYO-inositol dehydrogen 97.1 0.0015 5.1E-08 69.3 10.2 97 308-431 4-105 (344)
301 2dc1_A L-aspartate dehydrogena 97.1 0.00046 1.6E-08 69.1 5.7 77 310-423 2-81 (236)
302 3h9u_A Adenosylhomocysteinase; 97.1 0.00032 1.1E-08 75.7 4.7 85 309-422 212-297 (436)
303 3ulk_A Ketol-acid reductoisome 97.1 0.00082 2.8E-08 71.7 7.7 151 309-482 38-201 (491)
304 1id1_A Putative potassium chan 97.1 0.0027 9.1E-08 58.7 10.5 38 309-346 4-42 (153)
305 3u62_A Shikimate dehydrogenase 97.0 0.00016 5.5E-09 73.1 1.9 37 310-346 110-147 (253)
306 2egg_A AROE, shikimate 5-dehyd 97.0 0.00032 1.1E-08 72.9 4.0 40 309-348 142-182 (297)
307 3kb6_A D-lactate dehydrogenase 97.0 0.00047 1.6E-08 72.6 5.3 100 309-436 142-245 (334)
308 3p2y_A Alanine dehydrogenase/p 97.0 0.00037 1.3E-08 74.1 4.5 104 309-423 185-302 (381)
309 3phh_A Shikimate dehydrogenase 97.0 0.00041 1.4E-08 70.6 4.3 65 309-398 119-183 (269)
310 1tlt_A Putative oxidoreductase 97.0 0.0015 5.1E-08 68.5 8.7 97 306-430 3-104 (319)
311 2vhw_A Alanine dehydrogenase; 97.0 0.00037 1.3E-08 74.9 4.1 98 309-423 169-268 (377)
312 2z2v_A Hypothetical protein PH 97.0 0.00063 2.2E-08 72.7 5.7 88 309-422 17-107 (365)
313 4hkt_A Inositol 2-dehydrogenas 97.0 0.002 6.7E-08 67.9 9.4 97 308-432 3-104 (331)
314 3gvp_A Adenosylhomocysteinase 96.9 0.002 6.9E-08 69.3 9.3 85 309-422 221-306 (435)
315 1xea_A Oxidoreductase, GFO/IDH 96.9 0.0028 9.5E-08 66.5 10.3 96 309-430 3-102 (323)
316 2eez_A Alanine dehydrogenase; 96.9 0.00071 2.4E-08 72.6 5.8 99 309-423 167-266 (369)
317 4dio_A NAD(P) transhydrogenase 96.9 0.00033 1.1E-08 75.2 3.0 40 309-348 191-230 (405)
318 3n58_A Adenosylhomocysteinase; 96.9 0.0013 4.4E-08 70.9 7.2 88 309-426 248-336 (464)
319 3o8q_A Shikimate 5-dehydrogena 96.9 0.00093 3.2E-08 68.6 5.8 41 309-349 127-168 (281)
320 2ho3_A Oxidoreductase, GFO/IDH 96.8 0.0031 1.1E-07 66.2 9.8 95 309-430 2-101 (325)
321 1npy_A Hypothetical shikimate 96.8 0.0021 7.2E-08 65.6 8.1 40 309-348 120-160 (271)
322 3db2_A Putative NADPH-dependen 96.8 0.0026 8.8E-08 67.7 8.9 97 309-432 6-107 (354)
323 1p77_A Shikimate 5-dehydrogena 96.8 0.0013 4.3E-08 67.4 6.1 41 309-349 120-160 (272)
324 3ezy_A Dehydrogenase; structur 96.8 0.0025 8.5E-08 67.5 8.6 97 309-431 3-104 (344)
325 3c1a_A Putative oxidoreductase 96.8 0.0028 9.7E-08 66.2 8.9 93 308-430 10-108 (315)
326 1on3_A Methylmalonyl-COA carbo 96.8 0.016 5.4E-07 64.4 15.1 139 25-199 108-254 (523)
327 3u9r_B MCC beta, methylcrotony 96.8 0.03 1E-06 62.2 17.1 141 25-200 134-282 (555)
328 2bzr_A Propionyl-COA carboxyla 96.7 0.019 6.7E-07 63.9 15.5 135 25-197 121-266 (548)
329 3e18_A Oxidoreductase; dehydro 96.7 0.0035 1.2E-07 66.9 9.2 98 307-432 4-106 (359)
330 1nyt_A Shikimate 5-dehydrogena 96.7 0.0019 6.4E-08 66.1 6.7 40 309-348 120-159 (271)
331 3rc1_A Sugar 3-ketoreductase; 96.7 0.0034 1.2E-07 66.7 9.0 100 305-431 24-129 (350)
332 5mdh_A Malate dehydrogenase; o 96.7 0.00047 1.6E-08 72.6 2.1 98 309-420 4-126 (333)
333 3cea_A MYO-inositol 2-dehydrog 96.7 0.0058 2E-07 64.6 10.7 97 307-430 7-110 (346)
334 3jyo_A Quinate/shikimate dehyd 96.7 0.0015 5.2E-08 67.1 5.6 43 309-351 128-171 (283)
335 1x0u_A Hypothetical methylmalo 96.7 0.04 1.4E-06 61.2 17.3 147 18-200 95-253 (522)
336 2glx_A 1,5-anhydro-D-fructose 96.6 0.0068 2.3E-07 63.7 10.1 94 310-430 2-101 (332)
337 1iuk_A Hypothetical protein TT 96.6 0.0047 1.6E-07 56.3 7.6 82 309-420 14-100 (140)
338 3pwz_A Shikimate dehydrogenase 96.6 0.0026 8.9E-08 64.9 6.5 41 309-349 121-162 (272)
339 3don_A Shikimate dehydrogenase 96.6 0.00037 1.3E-08 71.4 0.0 38 309-346 118-156 (277)
340 1leh_A Leucine dehydrogenase; 96.5 0.0032 1.1E-07 66.9 7.1 39 309-347 174-212 (364)
341 1jw9_B Molybdopterin biosynthe 96.5 0.0032 1.1E-07 63.4 6.8 33 309-341 32-65 (249)
342 3mz0_A Inositol 2-dehydrogenas 96.5 0.0058 2E-07 64.6 9.1 97 309-430 3-105 (344)
343 3evn_A Oxidoreductase, GFO/IDH 96.5 0.0026 9E-08 66.9 6.3 101 306-432 3-108 (329)
344 3l9w_A Glutathione-regulated p 96.5 0.01 3.5E-07 64.4 11.0 40 309-348 5-44 (413)
345 1gpj_A Glutamyl-tRNA reductase 96.5 0.0017 6E-08 70.4 4.8 70 309-399 168-239 (404)
346 3ec7_A Putative dehydrogenase; 96.5 0.0058 2E-07 65.1 8.8 101 306-431 21-127 (357)
347 3ond_A Adenosylhomocysteinase; 96.4 0.0059 2E-07 66.9 8.6 87 309-423 266-352 (488)
348 3m2t_A Probable dehydrogenase; 96.4 0.0045 1.5E-07 66.0 7.4 99 307-431 4-108 (359)
349 2d59_A Hypothetical protein PH 96.4 0.0099 3.4E-07 54.4 8.7 80 309-420 23-107 (144)
350 1x0u_A Hypothetical methylmalo 96.4 0.02 6.9E-07 63.5 12.5 163 18-202 329-507 (522)
351 7mdh_A Protein (malate dehydro 96.3 0.0072 2.5E-07 64.2 8.3 107 308-424 32-159 (375)
352 3bio_A Oxidoreductase, GFO/IDH 96.3 0.0059 2E-07 63.5 7.5 74 308-408 9-84 (304)
353 1nvt_A Shikimate 5'-dehydrogen 96.3 0.0054 1.8E-07 63.2 6.9 74 309-396 129-202 (287)
354 3abi_A Putative uncharacterize 96.3 0.0046 1.6E-07 66.0 6.5 38 309-347 17-54 (365)
355 3fbt_A Chorismate mutase and s 96.2 0.0045 1.5E-07 63.4 5.8 39 309-347 123-162 (282)
356 2b0j_A 5,10-methenyltetrahydro 96.2 0.037 1.3E-06 55.1 12.0 109 376-487 129-242 (358)
357 1pjc_A Protein (L-alanine dehy 96.2 0.0029 9.8E-08 67.6 4.5 40 309-348 168-207 (361)
358 3tum_A Shikimate dehydrogenase 96.2 0.0088 3E-07 60.8 7.8 70 309-396 126-196 (269)
359 3ius_A Uncharacterized conserv 96.2 0.0099 3.4E-07 60.7 8.4 39 308-346 5-43 (286)
360 3tnl_A Shikimate dehydrogenase 96.2 0.0031 1.1E-07 65.7 4.3 42 309-350 155-200 (315)
361 1ff9_A Saccharopine reductase; 96.1 0.0031 1.1E-07 69.4 4.2 40 307-346 2-41 (450)
362 3r6d_A NAD-dependent epimerase 96.1 0.0082 2.8E-07 58.8 6.9 39 308-346 5-46 (221)
363 1x13_A NAD(P) transhydrogenase 96.1 0.0023 7.7E-08 69.3 2.9 39 309-347 173-211 (401)
364 4ina_A Saccharopine dehydrogen 96.0 0.011 3.8E-07 64.0 8.2 43 308-350 1-46 (405)
365 3dfz_A SIRC, precorrin-2 dehyd 96.0 0.027 9.2E-07 55.4 10.0 129 309-478 32-163 (223)
366 1ydw_A AX110P-like protein; st 96.0 0.024 8.1E-07 60.3 10.3 99 308-430 6-110 (362)
367 2p2s_A Putative oxidoreductase 95.9 0.023 8E-07 59.7 9.9 96 308-430 4-105 (336)
368 1l7d_A Nicotinamide nucleotide 95.9 0.0042 1.4E-07 66.9 3.9 39 309-347 173-211 (384)
369 3e8x_A Putative NAD-dependent 95.8 0.044 1.5E-06 54.1 11.0 39 308-346 21-60 (236)
370 1vrg_A Propionyl-COA carboxyla 95.8 0.099 3.4E-06 58.1 14.7 137 25-197 111-256 (527)
371 3t4e_A Quinate/shikimate dehyd 95.8 0.0084 2.9E-07 62.3 5.8 41 309-349 149-193 (312)
372 1h6d_A Precursor form of gluco 95.8 0.031 1.1E-06 61.1 10.6 102 306-430 81-189 (433)
373 2aef_A Calcium-gated potassium 95.8 0.011 3.7E-07 58.7 6.2 38 309-347 10-47 (234)
374 3upl_A Oxidoreductase; rossman 95.8 0.017 5.9E-07 62.6 8.1 153 309-487 24-190 (446)
375 3ohs_X Trans-1,2-dihydrobenzen 95.8 0.025 8.6E-07 59.4 9.3 98 309-432 3-107 (334)
376 3h2s_A Putative NADH-flavin re 95.7 0.0035 1.2E-07 61.5 2.3 37 310-346 2-39 (224)
377 2axq_A Saccharopine dehydrogen 95.7 0.0074 2.5E-07 66.5 5.1 41 307-347 22-63 (467)
378 1vrg_A Propionyl-COA carboxyla 95.7 0.11 3.7E-06 57.8 14.1 163 21-203 337-513 (527)
379 1f06_A MESO-diaminopimelate D- 95.6 0.012 4.2E-07 61.5 6.2 91 309-431 4-98 (320)
380 4a26_A Putative C-1-tetrahydro 95.6 0.0089 3E-07 61.2 4.8 74 309-424 166-240 (300)
381 1dih_A Dihydrodipicolinate red 95.6 0.015 5.3E-07 59.2 6.4 36 307-342 4-42 (273)
382 4f3y_A DHPR, dihydrodipicolina 95.6 0.01 3.5E-07 60.4 5.0 102 306-429 5-110 (272)
383 3ngx_A Bifunctional protein fo 95.5 0.0065 2.2E-07 61.3 3.4 72 309-424 151-223 (276)
384 4had_A Probable oxidoreductase 95.5 0.034 1.2E-06 58.8 9.3 73 306-400 21-99 (350)
385 3u3x_A Oxidoreductase; structu 95.5 0.084 2.9E-06 56.1 12.4 98 309-432 27-129 (361)
386 3e82_A Putative oxidoreductase 95.5 0.031 1.1E-06 59.5 9.0 69 307-400 6-80 (364)
387 1zud_1 Adenylyltransferase THI 95.5 0.035 1.2E-06 55.9 8.8 33 309-341 29-62 (251)
388 3eag_A UDP-N-acetylmuramate:L- 95.5 0.02 6.8E-07 60.0 7.1 36 307-342 3-39 (326)
389 4g65_A TRK system potassium up 95.5 0.022 7.4E-07 62.7 7.7 40 309-348 4-43 (461)
390 3gdo_A Uncharacterized oxidore 95.5 0.027 9.3E-07 59.8 8.2 95 307-430 4-104 (358)
391 3ew7_A LMO0794 protein; Q8Y8U8 95.4 0.0086 2.9E-07 58.4 4.0 38 309-346 1-39 (221)
392 1y7t_A Malate dehydrogenase; N 95.4 0.021 7E-07 60.0 7.0 33 309-341 5-45 (327)
393 1a4i_A Methylenetetrahydrofola 95.4 0.014 4.7E-07 59.7 5.2 72 309-424 166-238 (301)
394 2ixa_A Alpha-N-acetylgalactosa 95.3 0.053 1.8E-06 59.4 10.3 77 307-400 19-104 (444)
395 3fhl_A Putative oxidoreductase 95.1 0.019 6.6E-07 61.1 5.8 97 306-431 3-105 (362)
396 3dhn_A NAD-dependent epimerase 95.1 0.0089 3E-07 58.7 2.9 37 308-344 4-41 (227)
397 1on3_A Methylmalonyl-COA carbo 95.1 0.15 5.1E-06 56.6 12.8 163 20-202 332-508 (523)
398 3p2o_A Bifunctional protein fo 95.1 0.016 5.4E-07 58.8 4.5 72 309-424 161-233 (285)
399 3btv_A Galactose/lactose metab 95.0 0.077 2.6E-06 58.0 10.4 71 308-398 20-100 (438)
400 3qvo_A NMRA family protein; st 95.0 0.0083 2.8E-07 59.6 2.3 40 305-344 20-61 (236)
401 1edz_A 5,10-methylenetetrahydr 95.0 0.014 4.7E-07 60.6 4.0 91 309-426 178-278 (320)
402 3moi_A Probable dehydrogenase; 95.0 0.044 1.5E-06 58.9 8.1 96 309-431 3-104 (387)
403 3l07_A Bifunctional protein fo 95.0 0.018 6E-07 58.5 4.6 71 309-423 162-233 (285)
404 1lu9_A Methylene tetrahydromet 95.0 0.04 1.4E-06 56.5 7.5 42 309-350 120-162 (287)
405 2yyy_A Glyceraldehyde-3-phosph 94.9 0.091 3.1E-06 55.3 10.1 109 308-425 2-115 (343)
406 1b0a_A Protein (fold bifunctio 94.9 0.011 3.8E-07 60.0 2.8 72 309-424 160-232 (288)
407 3dty_A Oxidoreductase, GFO/IDH 94.8 0.1 3.4E-06 56.2 10.4 100 307-430 11-124 (398)
408 3fpf_A Mtnas, putative unchara 94.8 0.15 5.2E-06 52.2 11.0 94 309-422 124-221 (298)
409 3n6r_B Propionyl-COA carboxyla 94.8 0.33 1.1E-05 53.6 14.4 161 18-198 342-512 (531)
410 3dr3_A N-acetyl-gamma-glutamyl 94.7 0.051 1.7E-06 57.0 7.6 101 307-428 3-111 (337)
411 4a5o_A Bifunctional protein fo 94.7 0.021 7.2E-07 57.9 4.2 72 309-424 162-234 (286)
412 1zh8_A Oxidoreductase; TM0312, 94.7 0.092 3.2E-06 55.2 9.4 97 308-430 18-121 (340)
413 2bzr_A Propionyl-COA carboxyla 94.6 0.2 6.7E-06 55.8 12.3 161 20-200 353-531 (548)
414 2c2x_A Methylenetetrahydrofola 94.6 0.022 7.6E-07 57.6 4.1 71 309-423 159-232 (281)
415 3iav_A Propionyl-COA carboxyla 94.6 0.29 9.9E-06 54.2 13.3 165 16-201 334-514 (530)
416 3h8v_A Ubiquitin-like modifier 94.5 0.023 7.8E-07 58.3 4.1 33 309-341 37-70 (292)
417 3l6e_A Oxidoreductase, short-c 94.5 0.032 1.1E-06 55.4 5.0 42 308-349 3-45 (235)
418 3kux_A Putative oxidoreductase 94.5 0.068 2.3E-06 56.5 7.8 93 309-431 8-107 (352)
419 2nvw_A Galactose/lactose metab 94.4 0.12 4.2E-06 57.0 10.0 72 307-398 38-119 (479)
420 2gas_A Isoflavone reductase; N 94.4 0.048 1.6E-06 56.1 6.3 34 308-341 2-36 (307)
421 3gf3_A Glutaconyl-COA decarbox 94.4 0.8 2.7E-05 51.2 16.3 160 25-197 119-286 (588)
422 1y1p_A ARII, aldehyde reductas 94.4 0.2 6.7E-06 52.1 11.1 40 308-347 11-51 (342)
423 2vt3_A REX, redox-sensing tran 94.3 0.024 8.2E-07 55.5 3.6 78 309-411 86-167 (215)
424 4g81_D Putative hexonate dehyd 94.3 0.037 1.3E-06 55.7 5.0 44 309-352 9-54 (255)
425 3c1o_A Eugenol synthase; pheny 94.3 0.062 2.1E-06 55.7 7.0 34 308-341 4-38 (321)
426 3ff4_A Uncharacterized protein 94.3 0.045 1.5E-06 48.4 4.9 81 308-420 4-88 (122)
427 1pix_A Glutaconyl-COA decarbox 94.3 0.16 5.6E-06 56.9 10.6 158 26-204 385-563 (587)
428 3dqp_A Oxidoreductase YLBE; al 94.2 0.039 1.3E-06 53.8 4.9 35 310-344 2-37 (219)
429 4b4o_A Epimerase family protei 94.2 0.036 1.2E-06 56.9 4.8 34 309-342 1-35 (298)
430 3l77_A Short-chain alcohol deh 94.1 0.084 2.9E-06 52.0 7.3 44 308-351 2-46 (235)
431 2r6j_A Eugenol synthase 1; phe 94.0 0.047 1.6E-06 56.6 5.4 34 309-342 12-46 (318)
432 4gmf_A Yersiniabactin biosynth 94.0 0.083 2.8E-06 56.3 7.4 67 309-399 8-78 (372)
433 3kkj_A Amine oxidase, flavin-c 94.0 0.026 8.7E-07 55.9 3.2 32 310-341 4-35 (336)
434 3v5n_A Oxidoreductase; structu 94.0 0.1 3.5E-06 56.6 8.2 99 308-431 37-150 (417)
435 1cf2_P Protein (glyceraldehyde 94.0 0.11 3.9E-06 54.4 8.2 37 309-345 2-40 (337)
436 4hv4_A UDP-N-acetylmuramate--L 94.0 0.13 4.5E-06 57.1 9.2 37 306-342 20-57 (494)
437 3lk7_A UDP-N-acetylmuramoylala 94.0 0.13 4.3E-06 56.5 9.0 35 308-342 9-43 (451)
438 3k8x_A Acetyl-COA carboxylase; 93.9 0.16 5.5E-06 57.9 9.7 81 97-202 245-333 (758)
439 3f4l_A Putative oxidoreductase 93.9 0.043 1.5E-06 57.9 4.9 69 309-400 3-78 (345)
440 4fgs_A Probable dehydrogenase 93.8 0.23 7.8E-06 50.4 9.9 41 309-349 29-71 (273)
441 2z1n_A Dehydrogenase; reductas 93.8 0.091 3.1E-06 52.8 6.9 42 309-350 8-50 (260)
442 3ged_A Short-chain dehydrogena 93.7 0.2 6.7E-06 50.1 9.1 39 308-346 1-41 (247)
443 2wsb_A Galactitol dehydrogenas 93.7 0.057 1.9E-06 53.9 5.1 40 309-348 12-52 (254)
444 1qyc_A Phenylcoumaran benzylic 93.7 0.076 2.6E-06 54.5 6.2 34 308-341 4-38 (308)
445 3i6i_A Putative leucoanthocyan 93.7 0.11 3.8E-06 54.4 7.6 36 306-341 8-44 (346)
446 1vl6_A Malate oxidoreductase; 93.6 0.021 7.2E-07 60.5 1.8 32 309-340 193-225 (388)
447 3ai3_A NADPH-sorbose reductase 93.6 0.083 2.8E-06 53.2 6.2 43 309-351 8-51 (263)
448 4dry_A 3-oxoacyl-[acyl-carrier 93.5 0.09 3.1E-06 53.6 6.4 42 310-351 35-77 (281)
449 3f1l_A Uncharacterized oxidore 93.5 0.11 3.8E-06 51.9 7.0 44 309-352 13-57 (252)
450 2nwq_A Probable short-chain de 93.5 0.093 3.2E-06 53.3 6.4 41 309-349 22-63 (272)
451 3ruf_A WBGU; rossmann fold, UD 93.5 0.078 2.7E-06 55.7 6.0 35 308-342 25-60 (351)
452 4gqa_A NAD binding oxidoreduct 93.5 0.14 4.9E-06 55.2 8.3 96 310-431 28-136 (412)
453 4h3v_A Oxidoreductase domain p 93.5 0.043 1.5E-06 58.6 4.0 95 310-430 8-114 (390)
454 2ehd_A Oxidoreductase, oxidore 93.5 0.044 1.5E-06 54.0 3.8 39 309-347 6-45 (234)
455 3h5n_A MCCB protein; ubiquitin 93.4 0.098 3.3E-06 55.3 6.6 33 309-341 119-152 (353)
456 4hb9_A Similarities with proba 93.4 0.034 1.2E-06 59.5 3.1 34 309-342 2-35 (412)
457 3asu_A Short-chain dehydrogena 93.4 0.11 3.8E-06 51.8 6.6 40 310-349 2-42 (248)
458 1geg_A Acetoin reductase; SDR 93.4 0.075 2.6E-06 53.3 5.4 41 309-349 3-44 (256)
459 1nvm_B Acetaldehyde dehydrogen 93.3 0.13 4.4E-06 53.4 7.2 35 309-343 5-42 (312)
460 3pk0_A Short-chain dehydrogena 93.2 0.071 2.4E-06 53.8 5.0 42 309-350 11-53 (262)
461 1qyd_A Pinoresinol-lariciresin 93.2 0.11 3.6E-06 53.6 6.4 34 308-341 4-38 (313)
462 4fn4_A Short chain dehydrogena 93.2 0.41 1.4E-05 48.0 10.4 43 309-351 7-51 (254)
463 3ioy_A Short-chain dehydrogena 93.2 0.12 4.2E-06 53.8 6.8 43 309-351 9-52 (319)
464 1uls_A Putative 3-oxoacyl-acyl 93.1 0.077 2.6E-06 52.9 5.0 39 309-347 6-45 (245)
465 4ibo_A Gluconate dehydrogenase 93.1 0.056 1.9E-06 54.9 4.0 42 310-351 27-70 (271)
466 4e6p_A Probable sorbitol dehyd 93.1 0.068 2.3E-06 53.7 4.5 41 309-349 9-50 (259)
467 2czc_A Glyceraldehyde-3-phosph 93.1 0.14 4.8E-06 53.7 7.1 86 309-400 3-92 (334)
468 4dgk_A Phytoene dehydrogenase; 93.1 0.037 1.3E-06 61.3 2.8 35 308-342 1-35 (501)
469 1yb1_A 17-beta-hydroxysteroid 93.1 0.11 3.7E-06 52.7 6.1 41 309-349 32-73 (272)
470 1vl8_A Gluconate 5-dehydrogena 93.0 0.13 4.3E-06 52.1 6.5 43 309-351 22-65 (267)
471 3o9z_A Lipopolysaccaride biosy 93.0 0.19 6.4E-06 52.2 7.9 36 308-343 3-40 (312)
472 3awd_A GOX2181, putative polyo 93.0 0.1 3.4E-06 52.2 5.6 41 309-349 14-55 (260)
473 3ftp_A 3-oxoacyl-[acyl-carrier 93.0 0.094 3.2E-06 53.2 5.4 42 310-351 29-72 (270)
474 1ys4_A Aspartate-semialdehyde 93.0 0.14 4.7E-06 54.2 6.9 105 309-427 9-118 (354)
475 2ejw_A HDH, homoserine dehydro 92.9 0.13 4.4E-06 53.8 6.5 64 309-398 4-77 (332)
476 1xg5_A ARPG836; short chain de 92.9 0.094 3.2E-06 53.3 5.4 41 309-349 33-74 (279)
477 2pnf_A 3-oxoacyl-[acyl-carrier 92.9 0.13 4.6E-06 50.8 6.4 41 309-349 8-49 (248)
478 1lnq_A MTHK channels, potassiu 92.9 0.088 3E-06 55.2 5.3 36 309-345 116-151 (336)
479 3oa2_A WBPB; oxidoreductase, s 92.9 0.19 6.7E-06 52.2 7.9 36 308-343 3-40 (318)
480 1nff_A Putative oxidoreductase 92.9 0.073 2.5E-06 53.6 4.5 39 309-347 8-47 (260)
481 1c0p_A D-amino acid oxidase; a 92.9 0.064 2.2E-06 56.7 4.2 33 309-341 7-39 (363)
482 2jah_A Clavulanic acid dehydro 92.9 0.1 3.4E-06 52.1 5.4 41 309-349 8-49 (247)
483 1iy8_A Levodione reductase; ox 92.9 0.11 3.6E-06 52.5 5.6 42 309-350 14-56 (267)
484 3op4_A 3-oxoacyl-[acyl-carrier 92.8 0.082 2.8E-06 52.8 4.7 41 309-349 10-51 (248)
485 3nyw_A Putative oxidoreductase 92.8 0.095 3.2E-06 52.4 5.1 43 309-351 8-51 (250)
486 3oh8_A Nucleoside-diphosphate 92.8 0.12 4E-06 57.8 6.4 36 308-343 147-183 (516)
487 3gem_A Short chain dehydrogena 92.7 0.066 2.3E-06 54.0 3.8 37 309-345 28-65 (260)
488 2rhc_B Actinorhodin polyketide 92.6 0.12 4.2E-06 52.4 5.8 42 309-350 23-65 (277)
489 3gpi_A NAD-dependent epimerase 92.6 0.059 2E-06 54.9 3.3 37 307-343 2-38 (286)
490 3m2p_A UDP-N-acetylglucosamine 92.6 0.26 8.8E-06 50.7 8.3 36 308-343 2-38 (311)
491 1yde_A Retinal dehydrogenase/r 92.6 0.078 2.7E-06 53.7 4.2 39 309-347 10-49 (270)
492 3lf2_A Short chain oxidoreduct 92.6 0.15 5E-06 51.4 6.3 44 309-352 9-53 (265)
493 2ozp_A N-acetyl-gamma-glutamyl 92.6 0.14 4.7E-06 54.0 6.2 98 308-427 4-103 (345)
494 3svt_A Short-chain type dehydr 92.6 0.094 3.2E-06 53.4 4.8 43 309-351 12-55 (281)
495 3e5r_O PP38, glyceraldehyde-3- 92.5 0.16 5.5E-06 53.2 6.6 29 309-337 4-33 (337)
496 1w6u_A 2,4-dienoyl-COA reducta 92.5 0.21 7.3E-06 51.1 7.5 43 309-351 27-70 (302)
497 2ae2_A Protein (tropinone redu 92.5 0.16 5.3E-06 51.0 6.2 42 309-350 10-52 (260)
498 4fb5_A Probable oxidoreductase 92.5 0.1 3.5E-06 55.7 5.1 70 310-401 27-108 (393)
499 4ew6_A D-galactose-1-dehydroge 92.5 0.2 6.7E-06 52.4 7.2 72 306-409 23-101 (330)
500 3lyl_A 3-oxoacyl-(acyl-carrier 92.5 0.13 4.5E-06 51.0 5.6 41 309-349 6-47 (247)
No 1
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=100.00 E-value=5.5e-134 Score=1166.72 Aligned_cols=688 Identities=34% Similarity=0.556 Sum_probs=613.0
Q ss_pred EEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHH
Q 004918 8 MEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSV 87 (724)
Q Consensus 8 ~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~ 87 (724)
++. +|+|++||||||+.|+||.+|+++|.++++++++|+++|+|||||.|+.||+|+||+++...... ....
T Consensus 25 ~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aGaDl~~~~~~~~~-------~~~~ 96 (742)
T 3zwc_A 25 LRL-PHSLAMIRLCNPPVNAVSPTVIREVRNGLQKAGSDHTVKAIVICGANGNFCAGADIHGFSAFTPG-------LALG 96 (742)
T ss_dssp EEC-STTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCSSSCCSSCSC-------SHHH
T ss_pred EEe-eCCEEEEEeCCCcccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCCCccccCcChHhhhccChh-------HHHH
Confidence 444 78999999999999999999999999999999999999999999999999999999998653221 1234
Q ss_pred HHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCC
Q 004918 88 ELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSK 167 (724)
Q Consensus 88 ~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~ 167 (724)
+++ ++|.++||||||+|||+|+|||++|+|+||||||+++++|++||+++|++|++|++++|||++|..+|++|++||+
T Consensus 97 ~~~-~~i~~~~kPvIAai~G~a~GGG~elalacD~ria~~~a~fg~pev~lGl~Pg~ggt~rL~rlvG~~~A~~l~ltG~ 175 (742)
T 3zwc_A 97 SLV-DEIQRYQKPVLAAIQGVALGGGLELALGCHYRIANAKARVGLPEVTLGILPGARGTQLLPRVVGVPVALDLITSGK 175 (742)
T ss_dssp HHH-HHHHHCSSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHHCHHHHHHHHHHCC
T ss_pred HHH-HHHHhCCCCEEEEECccchHHHHHHHHhcCEEEEcCCCEEECcccCcccCCCccHHHHHHHhhhHHHHHHHHHcCC
Confidence 566 7799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhHHHH
Q 004918 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQAC 247 (724)
Q Consensus 168 ~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 247 (724)
+++|+||+++||||+|+|++. .+++.++|++++.+++...+...+.. .........+.......+++.++++|+..+
T Consensus 176 ~i~a~eA~~~GLv~~vv~~d~-~~~A~~~A~~ia~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~~~~~~A~~~~ 252 (742)
T 3zwc_A 176 YLSADEALRLGILDAVVKSDP-VEEAIKFAQKIIDKPIEPRRIFNKPV--PSLPNMDSVFAEAIAKVRKQYPGVLAPETC 252 (742)
T ss_dssp CEEHHHHHHHTSCSEEESSCH-HHHHHHHHHHHTTSCSGGGCGGGSCC--CCCTTHHHHHHHHHHHHHHHSTTCHHHHHH
T ss_pred chhHHHHHHcCCccEecCchh-hHHHHHHHHHHhcCCchhhhhhcccc--cccchhhhhHHHHHHHHhhhccchhHHHHH
Confidence 999999999999999998775 57889999999999876544332221 222222334445555667788899999999
Q ss_pred HHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCCCCC---CCCCCCCCcceEEEEcCCCCcHHHH
Q 004918 248 LDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVT---DIGLKPRGVRKVAVIGGGLMGSGIA 324 (724)
Q Consensus 248 ~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~~~~---~~~~~~~~~~kI~VIG~G~mG~~iA 324 (724)
+++++.+...+++++++.|++.|.+++.|+++++++++|+++|+++|.+... ..+...++|+||+|||+|+||++||
T Consensus 253 ~~~v~~~~~~~~~~gl~~E~~~F~~l~~s~~~k~~~~aFf~~r~~~k~~~~~~~~~~~~~~~~i~~v~ViGaG~MG~gIA 332 (742)
T 3zwc_A 253 VRSIQASVKHPYEVGIKEEEKLFMYLRASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIA 332 (742)
T ss_dssp HHHHHHHHHSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTTSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHH
T ss_pred HHHHHHHhhCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcccccccccccccccCcccccEEEEEcccHHHHHHH
Confidence 9999999999999999999999999999999999999999999998865322 2244567899999999999999999
Q ss_pred HHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCCCEEEEcccCChHHHHH
Q 004918 325 TAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQK 404 (724)
Q Consensus 325 ~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIeav~e~~~~k~~ 404 (724)
..++.+|++|+++|++++.++++.+.+.+.+++.+.++..+.. .....+++.+++++++++||+|||||+|++++|++
T Consensus 333 ~~~a~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~aDlVIEAV~E~l~iK~~ 410 (742)
T 3zwc_A 333 ISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQ--ASAKPKLRFSSSTKELSTVDLVVEAVFEDMNLKKK 410 (742)
T ss_dssp HHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTC--CCCCCCEEEESCGGGGGSCSEEEECCCSCHHHHHH
T ss_pred HHHHhCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccch--hhhhhhhcccCcHHHHhhCCEEEEeccccHHHHHH
Confidence 9999999999999999999999999999888887776654422 23446788899999999999999999999999999
Q ss_pred HHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004918 405 IFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPV 484 (724)
Q Consensus 405 v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v 484 (724)
+|+++++++++++||+||||++++++++..+.+|+||+|+|||||++.+++||||+++.|++++++.+.++.+.+||+||
T Consensus 411 vf~~le~~~~~~aIlASNTSsl~i~~ia~~~~~p~r~ig~HFfnP~~~m~LVEvi~g~~Ts~e~~~~~~~~~~~lgK~pV 490 (742)
T 3zwc_A 411 VFAELSALCKPGAFLCTNTSALNVDDIASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGV 490 (742)
T ss_dssp HHHHHHHHSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhhcCCCCceEEecCCcCChHHHHhhcCCccccccccccCCCCCCceEEEecCCCCCHHHHHHHHHHHHHhCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCCC-------
Q 004918 485 VVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDR------- 557 (724)
Q Consensus 485 ~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~~~~g~~~Gp~~~~D~~Gld~~~~~~~~l~~~~~~~------- 557 (724)
+++|+||||+||++.++++|+++++++|+++++||.++..+|||||||+++|++|||+.+++.+.++...++.
T Consensus 491 ~vkd~pGFi~NRi~~~~~~ea~~l~~eG~~~~~id~a~~~~G~pmGPf~l~D~vGlDv~~~v~~~~~~~~~~~~~~~~~~ 570 (742)
T 3zwc_A 491 VVGNCYGFVGNRMLAPYYNQGFFLLEEGSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVR 570 (742)
T ss_dssp ECCCSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSTTSCTTCCTT
T ss_pred ccCCCCCccHHHHhhHHHHHHHHHHHcCCCHHHHHHHHHHcCCCCChHHHHHHhCHHHHHHHHHHHHhhCcccCccchhh
Confidence 9999999999999999999999999999999999999988999999999999999999999999876543321
Q ss_pred ----CCCcHHHHHHHHcCCCCcccCccceeccCCC--CCCCCCCchhHHHHHhhhccCCCCCCCcccCHHHHHHHHHHHH
Q 004918 558 ----SFQSPLVDLLLKSGRNGKANGKGLYTYEKGS--KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPV 631 (724)
Q Consensus 558 ----~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~ 631 (724)
..+++++++|+++|++|+|||+|||+|++++ ...+++++..++...+......+ ..++.++|++|+++++
T Consensus 571 ~~~~~~~~~l~~~mv~~G~lG~KtG~GFY~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ei~~R~l~~~ 646 (742)
T 3zwc_A 571 KRGNSRYSPLGDMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ----RTISKEEILERCLYSL 646 (742)
T ss_dssp EETTEECCCHHHHHHTTTCCBGGGTBSSSEESSTTCSCEECCHHHHHHHHHHHHHHTCCC----CCCCHHHHHHHHHHHH
T ss_pred hcccccccHHHHHHHHCCCccccCCCeeEECCCCCCccCCCChHHHHHHHHHhhhcCCCc----CCCCHHHHHHHHHHHH
Confidence 1146799999999999999999999998643 34577777777665544333332 3578899999999999
Q ss_pred HHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCC--CCCCCHHHHHHHHcCC-
Q 004918 632 VNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGI- 708 (724)
Q Consensus 632 ~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~k~g~- 708 (724)
+||+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.|+++++.+|+ +|+|+++|++|+++|+
T Consensus 647 ~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~L~~ma~~G~~ 726 (742)
T 3zwc_A 647 INEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSP 726 (742)
T ss_dssp HHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCC
T ss_pred HHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHHHHHHHHcCCC
Confidence 9999999999999999999999999999999999999999999999999999999999985 8999999999999997
Q ss_pred CCCCC
Q 004918 709 PLSAP 713 (724)
Q Consensus 709 gfy~~ 713 (724)
+||+|
T Consensus 727 ~f~~~ 731 (742)
T 3zwc_A 727 PLKEW 731 (742)
T ss_dssp CGGGH
T ss_pred ccccc
Confidence 47777
No 2
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.2e-125 Score=1105.35 Aligned_cols=706 Identities=58% Similarity=0.958 Sum_probs=595.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CccCCCCchhhhhccCC--C
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGA--G 77 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~-~F~aG~Dl~~~~~~~~~--~ 77 (724)
|+++.+.++..+++|++||||||+.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++...... .
T Consensus 4 ~~~~~i~~~~~~~~va~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 82 (725)
T 2wtb_A 4 RTKGKTVMEVGGDGVAVITLINPPVNSLSFDVLYNLKSNYEEALSRNDVKAIVITG-AKGRFSGGFDISGFGEMQKGNVK 82 (725)
T ss_dssp ---CEEEEEECTTSEEEEEEECTTTTCCCHHHHHHHHHHHHHHTTCTTCCEEEEEE-SSSCCBCSSCC------------
T ss_pred CcCCeEEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCcccCCcCHHHHhcccchhhh
Confidence 56677889833789999999999889999999999999999999999999999999 76 99999999998542211 0
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
....+....++++ ++|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~Ggt~~L~rlvG~~ 161 (725)
T 2wtb_A 83 EPKAGYISIDIIT-DLLEAARKPSVAAIDGLALGGGLELAMACHARISAPAAQLGLPELQLGVIPGFGGTQRLPRLVGLT 161 (725)
T ss_dssp CCSSSHHHHHCCC-CCCCTSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred hHHHHHHHHHHHH-HHHHhCcCcEEEEECCccCcccHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhcCHH
Confidence 0112222333444 568899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccC-ch--hhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR-KP--WIRSLHRTDKLGSLSEAREVLKLARLQA 234 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (724)
+|++|++||++++|+||+++||||+|||++++.+++.+++++++..+ +. ..+. + .+.+........+..++...
T Consensus 162 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~~~~~~~--~-~~~~~~~~~~~~~~~a~~~~ 238 (725)
T 2wtb_A 162 KALEMILTSKPVKAEEGHSLGLIDAVVPPAELVTTARRWALDIVGRRKPWVSSVSK--T-DKLPPLGEAREILTFAKAQT 238 (725)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEECCTTTHHHHHHHHHHHHHTTSSCCCCGGGC--C-TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCccceEcChhHHHHHHHHHHHHHHhcCCChhhhhhh--c-cccCccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998872 22 1210 0 01111222233555566655
Q ss_pred H-HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCcceEEE
Q 004918 235 K-KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313 (724)
Q Consensus 235 ~-~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~~~~~~~~~~~~~~kI~V 313 (724)
+ ++++ |||+..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++....+..+++|+||+|
T Consensus 239 ~~~~~g-~pA~~~~k~~~~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~~~~~~~~~~kV~V 317 (725)
T 2wtb_A 239 LKRAPN-MKHPLMCLDAIEVGIVSGPRAGLEKEAEVASQVVKLDTTKGLIHVFFSQRGTAKVPGVTDRGLVPRKIKKVAI 317 (725)
T ss_dssp HHHCTT-CCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCTTTSSSCCCCCCCCCEEE
T ss_pred HHhccC-CcHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHhcchhHHHHHHHhhhhhhhcccCCCCccccccccCcEEEE
Confidence 4 4555 9999999999999999999999999999999999999999999999999999998763211334567899999
Q ss_pred EcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCCCEEEE
Q 004918 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 393 (724)
Q Consensus 314 IG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIe 393 (724)
||+|.||++||.+++++|++|++||++++.++++.+.+++.++++++.|.++..+.....++++.+++++++++||+||+
T Consensus 318 IGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIe 397 (725)
T 2wtb_A 318 IGGGLMGSGIATALILSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDYESFRDVDMVIE 397 (725)
T ss_dssp ECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEEESSSGGGTTCSEEEE
T ss_pred EcCCHhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCHHHHCCCCEEEE
Confidence 99999999999999999999999999999999998889999999999999988878888899999999988999999999
Q ss_pred cccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHH
Q 004918 394 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473 (724)
Q Consensus 394 av~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~ 473 (724)
||||+.++|+++++++.+++++++||+||||++++++++..+.++++|+|+|||+|++.++++|+++|+.|++++++.+.
T Consensus 398 aVpe~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~p~~~iG~hf~~P~~~~~lvevv~g~~t~~e~~~~~~ 477 (725)
T 2wtb_A 398 AVIENISLKQQIFADLEKYCPQHCILASNTSTIDLNKIGERTKSQDRIVGAHFFSPAHIMPLLEIVRTNHTSAQVIVDLL 477 (725)
T ss_dssp CCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTCSCTTTEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHH
T ss_pred cCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCHHHHHHHhcCCCCEEEecCCCCcccCceEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHh
Q 004918 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 553 (724)
Q Consensus 474 ~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~~~~g~~~Gp~~~~D~~Gld~~~~~~~~l~~~ 553 (724)
++++.+||+|+++++.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++.
T Consensus 478 ~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~e~id~~~~~~g~p~Gp~~l~D~vGld~~~~i~~~~~~~ 557 (725)
T 2wtb_A 478 DVGKKIKKTPVVVGNCTGFAVNRMFFPYTQAAMFLVECGADPYLIDRAISKFGMPMGPFRLCDLVGFGVAIATATQFIEN 557 (725)
T ss_dssp HHHHHTTCEEEEEESSTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999998
Q ss_pred CCCC-CCCcHHHHHHHHcCCCCcccCccceeccCCCCCCCCCCchhHHHHHhhhccCCCCCCCcccCHHHHHHHHHHHHH
Q 004918 554 FPDR-SFQSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVV 632 (724)
Q Consensus 554 ~~~~-~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~ 632 (724)
++++ +.| +++++|+++|++|+|||+|||+|++.++..+|+++..++...+....+.+..+...+++++|++|++++++
T Consensus 558 ~~~~~~~~-~~l~~~v~~g~lG~k~g~GfY~y~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~l~~~~ 636 (725)
T 2wtb_A 558 FSERTYKS-MIIPLMQEDKRAGEATRKGFYLYDDKRKAKPDPELKKYIEKARSISGVKLDPKLANLSEKDIIEMTFFPVV 636 (725)
T ss_dssp SGGGCCCC-THHHHHHTTC---------------------CCCCCTTSHHHHHHTCCSCCCTTTTCCHHHHHHHHHHHHH
T ss_pred cCCccCCh-HHHHHHHHCCCceecCCceeEeCCCCccCCCCHHHHHHHHhhhhhccccchhhcccCCHHHHHHHHHHHHH
Confidence 8876 336 99999999999999999999999632222477888777654332111101111113678999999999999
Q ss_pred HHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHcCCCCCC
Q 004918 633 NESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKGIPLSA 712 (724)
Q Consensus 633 ~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~k~g~gfy~ 712 (724)
||+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+++.+|++|.|+++|++|+++|++||+
T Consensus 637 nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~~~~~g~~~~p~~~l~~~~~~g~~f~~ 716 (725)
T 2wtb_A 637 NEACRVFAEGIAVKAADLDIAGIMGMGFPPYRGGIMFWADSIGSKYIYSRLDEWSKAYGEFFKPCAFLAERGSKGVLLSA 716 (725)
T ss_dssp HHHHHHHHTTSSSCHHHHHHHHHHHHCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHHCGGGCCCHHHHHHHHHTCCSSS
T ss_pred HHHHHHHhcCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHcCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred C
Q 004918 713 P 713 (724)
Q Consensus 713 ~ 713 (724)
.
T Consensus 717 ~ 717 (725)
T 2wtb_A 717 P 717 (725)
T ss_dssp C
T ss_pred h
Confidence 4
No 3
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=100.00 E-value=5.1e-125 Score=1099.79 Aligned_cols=696 Identities=30% Similarity=0.525 Sum_probs=615.5
Q ss_pred CCcEEEEEecCcEEEEEeCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CccCCCCchhhhhccCCC--
Q 004918 3 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAG-- 77 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p--~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~-~F~aG~Dl~~~~~~~~~~-- 77 (724)
.+.+.++..+++|++|||||| +.|+||.+|+++|.+++++++.|+++|+||||| |+ .||+|+|++++.......
T Consensus 5 ~~~i~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg-g~~~F~aG~Dl~~~~~~~~~~~~ 83 (715)
T 1wdk_A 5 GKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS-GKDVFIVGADITEFVENFKLPDA 83 (715)
T ss_dssp CSSEEEEECGGGEEEEEECCTTSSSCBCCHHHHHHHHHHHHHHHHCTTCCEEEEEE-SSSSSBBCCCHHHHHHHTTSCHH
T ss_pred CCeEEEEEeeCCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEC-CCCeEeCCcCHHHHhhcccCCHH
Confidence 356888833789999999999 579999999999999999999999999999999 76 999999999986532111
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
....+....++++ ++|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~elalacD~ria~~~a~fglpev~lGl~P~~ggt~~L~r~vG~~ 162 (715)
T 1wdk_A 84 ELIAGNLEANKIF-SDFEDLNVPTVAAINGIALGGGLEMCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVD 162 (715)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEeCCCEEeChhhccCCCCCccHHHHHHHHhCHH
Confidence 1111223345566 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccC--CCC-CcHHHHHHHHHHHH-H
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTD--KLG-SLSEAREVLKLARL-Q 233 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~-~ 233 (724)
+|++|++||++++|+||+++||||+|||++++.+++.+++++++....++.... +.. +.. +.......+..++. .
T Consensus 163 ~A~~l~ltG~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~k~~~ 241 (715)
T 1wdk_A 163 NAVEWIASGKENRAEDALKVSAVDAVVTADKLGAAALDLIKRAISGELDYKAKR-QPKLEKLKLNAIEQMMAFETAKGFV 241 (715)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHHTTSSCHHHHH-GGGGSCCSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHhhccCCcchhc-ccccCccccCchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988621111110 000 000 10111112333443 3
Q ss_pred HHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCCCCCCCCCCCCCcceEEE
Q 004918 234 AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVPNVTDIGLKPRGVRKVAV 313 (724)
Q Consensus 234 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~~~~~~~~~~~~~~kI~V 313 (724)
.|+++++||||..+|++++.+...+++++++.|.+.|..++.|+++++++++|++||+++|.++.+. + .+++++||+|
T Consensus 242 ~~~~~g~~~A~~~~k~~v~~~~~~~~~~~l~~E~~~~~~l~~s~~~~~~~~aF~~kr~~~~~~~~~~-~-~~~~i~kV~V 319 (715)
T 1wdk_A 242 AGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQELKKKAKVYD-K-IAKDVKQAAV 319 (715)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-T-TCCCCSSEEE
T ss_pred HHhcccCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcchhHHHHHHHHHhhhhhhccccCCC-C-ccccCCEEEE
Confidence 5688999999999999999999999999999999999999999999999999999999998764222 2 3467899999
Q ss_pred EcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCCCEEEE
Q 004918 314 IGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIE 393 (724)
Q Consensus 314 IG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIe 393 (724)
||+|.||++||..++++|++|++||++++.++++...+++.+++++++|.+++.+.....++++.+++++++++||+||+
T Consensus 320 IGaG~MG~~iA~~la~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~~~~~~aDlVIe 399 (715)
T 1wdk_A 320 LGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVE 399 (715)
T ss_dssp ECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGGCSEEEE
T ss_pred ECCChhhHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCHHHHCCCCEEEE
Confidence 99999999999999999999999999999999998889999999999999999888888888998888888999999999
Q ss_pred cccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHH
Q 004918 394 AVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLM 473 (724)
Q Consensus 394 av~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~ 473 (724)
||||+.++|+++++++.+++++++||+||||++++++++..+.++++|+|+|||+|++.++++|+++++.|++++++.+.
T Consensus 400 aV~e~~~vk~~v~~~l~~~~~~~~IlasntStl~i~~la~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~ 479 (715)
T 1wdk_A 400 AVVENPKVKQAVLAEVENHVREDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTV 479 (715)
T ss_dssp CCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHGGGCSCGGGEEEEECCSSTTTCCEEEEEECSSCCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHHHHhcCccceEEEEccCCcccCceEEEEECCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred HHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHHHh
Q 004918 474 TVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFDKA 553 (724)
Q Consensus 474 ~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~~~~g~~~Gp~~~~D~~Gld~~~~~~~~l~~~ 553 (724)
++++.+||+|+++++.|||++||++.++++|++.++++|+++++||.++.++|+|||||+++|++|||+.+++.+.+++.
T Consensus 480 ~l~~~lGk~~v~v~d~~Gfi~Nril~~~~~Ea~~l~~~G~~~~~id~~~~~~G~p~Gp~~l~D~vGld~~~~i~~~~~~~ 559 (715)
T 1wdk_A 480 AYAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYLMDVVGIDTGHHGRDVMAEG 559 (715)
T ss_dssp HHHHHTTCEEEEEESCTTTTHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEeEEEcCCCChhhhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHcCCCCCHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998899999999999999999999999999988
Q ss_pred CCCCCCCc--HHHHHHHHcCCCCcccCccceecc-C--CC-CCCCCCCchhHHHHHhhhccCCCCCCCcccCHHHHHHHH
Q 004918 554 FPDRSFQS--PLVDLLLKSGRNGKANGKGLYTYE-K--GS-KPKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMI 627 (724)
Q Consensus 554 ~~~~~~~~--~~l~~~v~~g~~G~k~g~Gfy~y~-~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~ 627 (724)
+++++.|+ +++++||++|++|+|||+|||+|+ + ++ .+.+|+++..++...+. + ...+++++|++|+
T Consensus 560 ~~~~~~~~~~~~l~~~v~~g~lG~k~g~GfY~y~~~~~g~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~~i~~r~ 631 (715)
T 1wdk_A 560 FPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQKKLVDSSVLEVLKPIVY-----E---QRDVTDEDIINWM 631 (715)
T ss_dssp CHHHHCCSSCCHHHHHHHTTCCBTTTTBSSSEEC-------CEECCTHHHHHHGGGCC-----C---CCCCCHHHHHHHH
T ss_pred cCCccCCChHHHHHHHHhCchhhhcCCcEEEecccCcCCCCcCCCCHHHHHHHhhhcc-----C---ccCCCHHHHHHHH
Confidence 87765577 899999999999999999999996 3 22 23467766666543211 1 1236789999999
Q ss_pred HHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCCCCCCCHHHHHHHHcC
Q 004918 628 LFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPSRFLEERATKG 707 (724)
Q Consensus 628 ~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~~~l~~~~k~g 707 (724)
+++++||+++|++|||+.+++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.+ +.+|++|.|+++|++|+++|
T Consensus 632 l~~~~nea~~~l~egi~~~~~diD~~~~~G~g~p~~~GGp~~~~d~~G~~~~~~~~~~~-~~~g~~~~p~~~l~~~~~~g 710 (715)
T 1wdk_A 632 MIPLCLETVRCLEDGIVETAAEADMGLVYGIGFPLFRGGALRYIDSIGVAEFVALADQY-AELGALYHPTAKLREMAKNG 710 (715)
T ss_dssp HHHHHHHHHHHHHHTSSSSHHHHHHHHHHHTCCCGGGCCHHHHHHHHCHHHHHHHHHHT-GGGCGGGCCCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCCcCCHHHHHHHHHhCCCCCCCCCCHHHHHHHhCHHHHHHHHHHH-HhcCCCCCCCHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999 88999999999999999999
Q ss_pred CCCCC
Q 004918 708 IPLSA 712 (724)
Q Consensus 708 ~gfy~ 712 (724)
++||.
T Consensus 711 ~~f~~ 715 (715)
T 1wdk_A 711 QSFFG 715 (715)
T ss_dssp CCSCC
T ss_pred CCCCC
Confidence 99984
No 4
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=100.00 E-value=3.6e-79 Score=670.42 Aligned_cols=395 Identities=28% Similarity=0.493 Sum_probs=355.6
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 304 KPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 304 ~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
.+++|+||+|||+|+||++||..++++|++|++||++++ ++...+++.+++++++|.++.++.+..+++++++++++
T Consensus 50 ~~~~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e---~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~t~dl~ 126 (460)
T 3k6j_A 50 EAYDVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ---RCKQELEVMYAREKSFKRLNDKRIEKINANLKITSDFH 126 (460)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH---HHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEEESCGG
T ss_pred CcccCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH---HHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEEeCCHH
Confidence 456789999999999999999999999999999999998 45667888888999999999999999999999999999
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCC
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~ 463 (724)
++++||+|||||||++++|+++|+++.+.+++++||+||||+++++++++.+.+|++|+|+|||+|++.++++||++++.
T Consensus 127 al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~ia~~~~~p~r~iG~HffnPv~~m~LvEIv~g~~ 206 (460)
T 3k6j_A 127 KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEISSVLRDPSNLVGIHFFNPANVIRLVEIIYGSH 206 (460)
T ss_dssp GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHHHTTSSSGGGEEEEECCSSTTTCCEEEEECCSS
T ss_pred HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHHHHhccCCcceEEEEecchhhhCCEEEEEeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHH-HcCCCHHHHHHHHHhcCCCccHHHHHHhhchHH
Q 004918 464 TSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLV-SLGVDVFRIDSAIRSFGLPIGPFQLLDLAGYGV 542 (724)
Q Consensus 464 t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~-~~Gv~~~~ID~a~~~~g~~~Gp~~~~D~~Gld~ 542 (724)
|++++++.+.++++.+||+||+++|.|||++||++.++++||+.++ ++|+++++||+++.++|+|||||+++|++|||+
T Consensus 207 Ts~e~~~~~~~l~~~lGk~~v~v~d~pGfi~Nril~~~~~EA~~l~~~~Ga~~e~ID~a~~~~G~pmGPf~l~D~vGlD~ 286 (460)
T 3k6j_A 207 TSSQAIATAFQACESIKKLPVLVGNCKSFVFNRLLHVYFDQSQKLMYEYGYLPHQIDKIITNFGFLMGPMTVADMNGFDV 286 (460)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEESSCCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTBSSCHHHHHHHHCTHH
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEecccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHcCCCcCHHHHHHHhchHH
Confidence 9999999999999999999999999999999999999999999999 779999999999988999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCcHHHHHHHHcCCCCcccCccceeccCCCC-CCCCCCchhHHHHHhhhccCCCCCCCcccCHH
Q 004918 543 AAATSKEFDKAFPDRSFQSPLVDLLLKSGRNGKANGKGLYTYEKGSK-PKPDPSVLPIIEECRRLSNIMPGGKPISVTEK 621 (724)
Q Consensus 543 ~~~~~~~l~~~~~~~~~~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (724)
.+++.+.+ .. .+++++++||++|++|+|||+|||+|+++++ +.+++++..++...+....+. ...++++
T Consensus 287 ~~~i~~~~----~~--~~~~~l~~~v~~G~lG~KtG~GFY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 356 (460)
T 3k6j_A 287 MEKLKKEN----GL--EPNPIEKEMWRLKRYGRKTNKGFYKYDDKTQRKENDTEMEQIIRRVSQNAKSN----IQIINDQ 356 (460)
T ss_dssp HHHHHHHS----CC--CCCHHHHHHHHTTCCBGGGTBSSSEECTTTCCEECCHHHHHHHHHC---CCCS----SCCCSHH
T ss_pred HHHHHHHh----cc--CchHHHHHHHHCCCCeeecCCEEEECCCCCCCCCCCHHHHHHHHHHHHhcCCC----cccCChH
Confidence 99998766 11 2568999999999999999999999987543 456666666654332211111 2347889
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCCC--CCCCHH
Q 004918 622 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF--FKPSRF 699 (724)
Q Consensus 622 ~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~--~~p~~~ 699 (724)
+|++|++++++||+++||+|||+++++|||.+|++|+|||+|+||||+|+|.+|++.+++.++.|++.+|++ |+|+++
T Consensus 357 ~i~~r~l~~~~nea~~~l~egi~~~~~diD~~~~~G~GfP~~~GGp~~~~d~~G~~~~~~~l~~l~~~~g~~~~~~p~~~ 436 (460)
T 3k6j_A 357 DVINFMLYPTVNEGYRCIEEGVISNESLIDIMFILGFGWPIHSGGPMRFGKTEGLDKIANMLVHWSSLEPKESAYIVADA 436 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTCCCSEETTEECBCSSCBSSHHHHHHHHHHHHHCTTCGGGSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcchhhhHHHHhcCCCCccccCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999999999999999999998999999999999999999999999999999999999999999999987 999999
Q ss_pred HHHHHHcCCCCC
Q 004918 700 LEERATKGIPLS 711 (724)
Q Consensus 700 l~~~~k~g~gfy 711 (724)
|++|+++|+-|-
T Consensus 437 L~~~a~~g~~~~ 448 (460)
T 3k6j_A 437 LKTANVSTGSSG 448 (460)
T ss_dssp HHHHC-------
T ss_pred HHHHHHcCCCcc
Confidence 999998887664
No 5
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=100.00 E-value=1e-74 Score=646.08 Aligned_cols=433 Identities=33% Similarity=0.536 Sum_probs=372.7
Q ss_pred CCHHHHHHHHHHHHhhhhcCCCCC--CC-CCCCCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 275 MLDTSRGLVHVFFAQRATSKVPNV--TD-IGLKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 275 ~s~~~~~~~~af~~~r~~~~~~~~--~~-~~~~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
.|++++++++.|+.+|..+|.+.. +. .+..+++++||+|||+|.||++||..|+++|++|++||++++.++.+.+.+
T Consensus 1 ~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 1 ASGQAKALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGISVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp -CHHHHHHHHHHHGGGGGGSCBCTTCCBTTTCCCCCCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCccCCCccccccCCCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 489999999999999999885431 11 123456789999999999999999999999999999999999999998888
Q ss_pred HHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 352 EANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 352 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
++.+...++.|.++..+.+... ...+++++++++||+||+||||+.++|+++++++.+++++++||+||||+++++++
T Consensus 81 ~~~l~~~~~~g~~~~~~~~~~~--~~i~~~~~~~~~aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~~~~~l 158 (463)
T 1zcj_A 81 TFTLEKEASRAHQNGQASAKPK--LRFSSSTKELSTVDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALNVDDI 158 (463)
T ss_dssp HHHHHHHHHHHHHTTCCCCCCC--EEEESCGGGGTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHH--hhhcCCHHHHCCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCcCHHHH
Confidence 8777777666544322111111 22366778899999999999999999999999999999999999999999999999
Q ss_pred hcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHc
Q 004918 432 GEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSL 511 (724)
Q Consensus 432 ~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~ 511 (724)
+..+.++++++|+|||+|++.++++|+++++.|++++++.+.++++.+|++++++++.|||++||++.++++|++.++++
T Consensus 159 a~~~~~~~~~ig~hf~~P~~~~~lvevv~g~~t~~e~~~~~~~l~~~lGk~~v~v~~~~gfi~Nrll~~~~~ea~~l~~~ 238 (463)
T 1zcj_A 159 ASSTDRPQLVIGTHFFSPAHVMRLLEVIPSRYSSPTTIATVMSLSKKIGKIGVVVGNCYGFVGNRMLAPYYNQGFFLLEE 238 (463)
T ss_dssp HTTSSCGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEBCCSTTTTHHHHHHHHHHHHHHHHHT
T ss_pred HHHhcCCcceEEeecCCCcccceeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHHHHc
Confidence 99888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHhcCCCccHHHHHHhhchHHHHHHHHHHH---HhCC-------CCC-CCcHHHHHHHHcCCCCcccCcc
Q 004918 512 GVDVFRIDSAIRSFGLPIGPFQLLDLAGYGVAAATSKEFD---KAFP-------DRS-FQSPLVDLLLKSGRNGKANGKG 580 (724)
Q Consensus 512 Gv~~~~ID~a~~~~g~~~Gp~~~~D~~Gld~~~~~~~~l~---~~~~-------~~~-~~~~~l~~~v~~g~~G~k~g~G 580 (724)
|+++++||.+++++|+|||||+++|.+|||+.+++++.+. +.++ +.. ..++++++||++|++|+|||+|
T Consensus 239 G~~~~~id~~~~~~g~p~Gp~~l~D~~GlD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~g~lG~k~g~G 318 (463)
T 1zcj_A 239 GSKPEDVDGVLEEFGFKMGPFRVSDLAGLDVGWKIRKGQGLTGPSLPPGTPVRKRGNSRYSPLGDMLCEAGRFGQKTGKG 318 (463)
T ss_dssp TCCHHHHHHHHHHHTCSSCHHHHHHHHCHHHHHHHHHHTTSSSSCCCTTCCTTEETTEECCTHHHHHHHTTCCBGGGTBS
T ss_pred CCCHHHHHHHHHHcCCCCcHHHHHHHcchHHHHHHHHHHhhhcccccccccccccccccchHHHHHHHHCCCCeeecCCe
Confidence 9999999999999999999999999999999999998872 2211 111 1368999999999999999999
Q ss_pred ceeccCCCC--CCCCCCchhHHHHHhhhccCCCCCCCcccCHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHcc
Q 004918 581 LYTYEKGSK--PKPDPSVLPIIEECRRLSNIMPGGKPISVTEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGM 658 (724)
Q Consensus 581 fy~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~ 658 (724)
||+|+++++ ...++++..++........+.+ ..+++++|+||++.+++|||++|++|||+++++|||.+|++|+
T Consensus 319 fy~y~~~g~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~ 394 (463)
T 1zcj_A 319 WYQYDKPLGRIHKPDPWLSTFLSQYREVHHIEQ----RTISKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGY 394 (463)
T ss_dssp SEEESSTTCSCEEECHHHHHHHHHHHHHTTCCC----CCCCHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHS
T ss_pred eccCCCCCCCCCCCCHHHHHHHHHHHHHcCCCc----ccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCC
Confidence 999964222 2346666555554432222222 2367899999999999999999999999988999999999999
Q ss_pred CCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCC--CCCCCHHHHHHHHcCCCCC-CC
Q 004918 659 SFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN--FFKPSRFLEERATKGIPLS-AP 713 (724)
Q Consensus 659 g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~--~~~p~~~l~~~~k~g~gfy-~~ 713 (724)
|||+|+||||+|+|.+|++++++.++.|++.+|+ +|+|+++|++|+++|++|. .|
T Consensus 395 G~p~~~gGP~~~~D~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~~~~~~~ 452 (463)
T 1zcj_A 395 GWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPLKEW 452 (463)
T ss_dssp CCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTCCCGGGH
T ss_pred CCCCCCcChHHHHHHhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCCCcccch
Confidence 9999999999999999999999999999999998 8999999999999999996 45
No 6
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=100.00 E-value=3e-74 Score=641.80 Aligned_cols=404 Identities=32% Similarity=0.497 Sum_probs=357.3
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
++++||+|||+|+||++||..++++|++|++||+++++++++.+.+++.+++++++|.++.++.+..+++++.+++++++
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 82 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIHAL 82 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGGGG
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHHHh
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999989
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTS 465 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~ 465 (724)
++||+||+||||+.++|+++++++.+.+++++||+||||++++++++..+.++++++|+|||+|++.++++|+++++.|+
T Consensus 83 ~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts 162 (483)
T 3mog_A 83 AAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATA 162 (483)
T ss_dssp GGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCC
T ss_pred cCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHH
Q 004918 466 AQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVA 543 (724)
Q Consensus 466 ~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~g~~~Gp~~~~D~~Gld~~ 543 (724)
+++++.+.++++.+||+++++++.|||++||++.++++|++.++++|. ++++||+++ .++|||||||+++|++|+|+.
T Consensus 163 ~e~~~~~~~l~~~lGk~~v~v~d~~Gfi~Nr~l~~~~~Ea~~l~~~g~~~~~~id~a~~~~~G~p~GP~~l~D~~Gld~~ 242 (483)
T 3mog_A 163 AEVVEQLCELTLSWGKQPVRCHSTPGFIVNRVARPYYSEAWRALEEQVAAPEVIDAALRDGAGFPMGPLELTDLIGQDVN 242 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESCTTTTHHHHTHHHHHHHHHHHHTTCSCHHHHHHHHHHTTCCSSCHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHHHhCCEEEEEeccCcchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCCCCHHHHHHHhchHHH
Confidence 999999999999999999999999999999999999999999999986 899999999 689999999999999999999
Q ss_pred HHHHHHHHHhC-CCCCC-CcHHHHHHHHcCCCCcccCccceeccCCCCCCC-----CCCchhHHH---------------
Q 004918 544 AATSKEFDKAF-PDRSF-QSPLVDLLLKSGRNGKANGKGLYTYEKGSKPKP-----DPSVLPIIE--------------- 601 (724)
Q Consensus 544 ~~~~~~l~~~~-~~~~~-~~~~l~~~v~~g~~G~k~g~Gfy~y~~~~~~~~-----~~~~~~~~~--------------- 601 (724)
+++++.+++.+ ++++| |++++++|+++|++|+|||+|||+|++++.... ++....++.
T Consensus 243 ~~v~~~~~~~~~~~~~~~~~~~~~~~v~~g~lG~k~g~GfY~y~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 322 (483)
T 3mog_A 243 FAVTCSVFNAFWQERRFLPSLVQQELVIGGRLGKKSGLGVYDWRAEREAVVGLEAVSDSFSPMKVEKKSDGVTEIDDVLL 322 (483)
T ss_dssp HHHHHHHHHHTTSCGGGCCCHHHHHHHHTTCCBGGGTBSSSBTTSCCCCCCCCCCCCGGGCCSCEEECSTTEEEETTEEE
T ss_pred HHHHHHHHHHhcCCCccCchHHHHHHHHCCCCceeCCCEeEECCCCCCCcccccCCCchhHHHHHHHHhcccccccchhh
Confidence 99999998886 44444 778999999999999999999999976322111 111000000
Q ss_pred -----------HHhh-----hccC--------C------------------CCCC-Cc--ccCHHHHHHHHHHHHHHHHH
Q 004918 602 -----------ECRR-----LSNI--------M------------------PGGK-PI--SVTEKEIVEMILFPVVNESC 636 (724)
Q Consensus 602 -----------~~~~-----~~~~--------~------------------~~~~-~~--~~~~~~i~~r~~~~~~~ea~ 636 (724)
.... ..++ . ..++ +. .-++++|+||++++++|||+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~~nEA~ 402 (483)
T 3mog_A 323 IETQGETAQALAIRLARPVVVIDKMAGKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMIINEAL 402 (483)
T ss_dssp EECSSSCHHHHHHHHTSCEEEEECCSSSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHHHHHHH
T ss_pred cccCCcchHHHhhccccceeeeeccccceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHHHHHHH
Confidence 0000 0000 0 0001 01 12578999999999999999
Q ss_pred HHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCC-CCCCCHHHHHHHHcCCCCCCC
Q 004918 637 RVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFLEERATKGIPLSAP 713 (724)
Q Consensus 637 ~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l~~~~k~g~gfy~~ 713 (724)
+|+++||+ |++|||.+|++|+|||+ |||+|+|.+|+|+++++++.|++.+|+ +|+|+++|++|++.|+.||+-
T Consensus 403 ~~l~eGva-s~~diD~a~~~G~G~P~---GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~~~ 476 (483)
T 3mog_A 403 DALQKGVA-SEQDIDTAMRLGVNYPY---GPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYESE 476 (483)
T ss_dssp HHHHTTSS-CHHHHHHHHHHHSCCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC---
T ss_pred HHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCCCC
Confidence 99999998 99999999999999999 999999999999999999999999985 999999999999999999975
No 7
>3hrx_A Probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus}
Probab=100.00 E-value=2.5e-53 Score=437.28 Aligned_cols=250 Identities=29% Similarity=0.379 Sum_probs=228.6
Q ss_pred EEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccch
Q 004918 6 VTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (724)
Q Consensus 6 v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (724)
|.+|+ +|+|++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... .......
T Consensus 2 vl~E~-~dgVa~itlnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~--~~~~~~~ 78 (254)
T 3hrx_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDRKP--DYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTSCC--CHHHHTH
T ss_pred eEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCcccCccHHHhcccch--hhHHHHH
Confidence 66788 889999999999 5899999999999999999999999999999999999999999999865322 1222334
Q ss_pred hHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHH
Q 004918 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (724)
Q Consensus 85 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~l 164 (724)
..+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|||++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~~lll 157 (254)
T 3hrx_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCEeeehhhhhhhccceeeEcCCCEEEchhhCcCcCCcccHHHHHHHHhCcchHHHHhh
Confidence 455566 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhH
Q 004918 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (724)
Q Consensus 165 tg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (724)
||++|+|+||+++||||+|||++++++++.++++++++.++.+++
T Consensus 158 tg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3hrx_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCcccCHHHHHHCCCeEEecCcHHHHHHHHHHHHHhhccchHHHH-----------------------------------
Confidence 999999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|+.+
T Consensus 203 -~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 252 (254)
T 3hrx_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhCCCCCCCC
Confidence 45778889999999999999999999999999999999999999998753
No 8
>4fzw_C 1,2-epoxyphenylacetyl-COA isomerase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=5.2e-53 Score=438.29 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=223.8
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc---c
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---V 79 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~---~ 79 (724)
+.|.+++ ++||++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++........ .
T Consensus 15 e~il~~~-~~gVa~itlnRP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~~~ 93 (274)
T 4fzw_C 15 EFILSHV-EKGVMTLTLNRPERLNSFNDEMHAQLAECLKQVERDDTIRCLLLTGAGRGFCAGQDLNDRNVDPTGPAPDLG 93 (274)
T ss_dssp -CEEEEE-ETTEEEEEECCTTTTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCCC---------CCCHH
T ss_pred ccEEEEE-ECCEEEEEEcCcCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcChHhhhccccccchHHH
Confidence 5688999 8999999999996 799999999999999999999999999999999999999999998764322211 1
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
..+.+..+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 94 ~~~~~~~~~l~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 172 (274)
T 4fzw_C 94 MSVERFYNPLV-RRLAKLPKPVICAVNGVAAGAGATLALGGDIVIAARSAKFVMAFSKLGLIPDCGGTWLLPRVAGRARA 172 (274)
T ss_dssp HHHHHTHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCGGGTTCCCTTTHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHH-HHHHHCCCCEEEEECCceeecCceeeeccceEEECCCCEEECcccCcccCCCccHHHHHHHHhhHHHH
Confidence 12222334455 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++|+|+||+++||||+|||++++.+++.++|++++..|+.+++
T Consensus 173 ~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 222 (274)
T 4fzw_C 173 MGLALLGNQLSAEQAHEWGMIWQVVDDETLADTAQQLARHLATQPTFGLG------------------------------ 222 (274)
T ss_dssp HHHHHHCCCEEHHHHHHTTSSSEEECGGGHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCcCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|+.+
T Consensus 223 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Egv~AF~eKR~P~f~ 272 (274)
T 4fzw_C 223 ------LIKQAINSAETNTLDTQLDLERDYQRLAGRSADYREGVSAFLAKRSPQFT 272 (274)
T ss_dssp ------HHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHC-CCCCCC
T ss_pred ------HHHHHHHHhhhCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 46788888899999999999999999999999999999999999998753
No 9
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=100.00 E-value=3.9e-53 Score=444.20 Aligned_cols=240 Identities=23% Similarity=0.364 Sum_probs=226.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHH-HHHHhhcCcccccCc-cC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVLDY-SE 384 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~~~-~~ 384 (724)
.++||+|||+|+||++||..++.+|++|+++|++++.++++.+.+++.+..++++|.++.. ..+..+++++.++++ ++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~~~~l~~a 84 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhcccccchHhH
Confidence 4789999999999999999999999999999999999999999999999999999988744 556678899999998 57
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCC
Q 004918 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t 464 (724)
+++||+|||||||++++|+++|++|++++++++||+||||++++++++..+.+|+||+|+|||||++.+|+||||+++.|
T Consensus 85 ~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~T 164 (319)
T 3ado_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPET 164 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTC
T ss_pred hccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHhh
Q 004918 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDLA 538 (724)
Q Consensus 465 ~~e~~~~~~~l~~~lGk~~v~v-~d~pG~i~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~g~~---~Gp~~~~D~~ 538 (724)
++++++++..|++.+||+||++ +|+||||+||++.++++||++++++|+ +++|||.++ .++|+| ||||+++|++
T Consensus 165 s~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NRl~~~~~~EA~~lv~eGvas~edID~~~~~g~g~~~a~mGPf~~~Dl~ 244 (319)
T 3ado_A 165 SPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLN 244 (319)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHHT
T ss_pred cHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCCCCcchhhhhhhc
Confidence 9999999999999999999866 899999999999999999999999997 999999999 788886 8999999999
Q ss_pred chHHHHHH
Q 004918 539 GYGVAAAT 546 (724)
Q Consensus 539 Gld~~~~~ 546 (724)
|+|+...+
T Consensus 245 G~~~~~~~ 252 (319)
T 3ado_A 245 AEGMLSYC 252 (319)
T ss_dssp TTSHHHHH
T ss_pred CccHHHHH
Confidence 99876544
No 10
>4fzw_A 2,3-dehydroadipyl-COA hydratase; structural genomics, montreal-kingston bacterial structural initiative, BSGI, crotonase fold; 2.55A {Escherichia coli}
Probab=100.00 E-value=8.3e-53 Score=433.27 Aligned_cols=250 Identities=30% Similarity=0.453 Sum_probs=228.1
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccc
Q 004918 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (724)
Q Consensus 5 ~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (724)
.|.+++ +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ...
T Consensus 6 ~l~ve~-~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~---~~~ 81 (258)
T 4fzw_A 6 ELIVSR-QQRVLLLTLNRPAARNALNNALLMQLVNELEAAATDTSISVCVITGNARFFAAGADLNEMAEKDLAA---TLN 81 (258)
T ss_dssp EEEEEE-ETTEEEEEEECGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEEECBCHHHHHTCCHHH---HHT
T ss_pred cEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEeCCCCceeCCCchhhhccchhhh---HHH
Confidence 588999 8999999999996 79999999999999999999999999999999999999999999886432111 112
Q ss_pred hhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHH
Q 004918 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (724)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ 163 (724)
.....++ .+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++|+
T Consensus 82 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ll 160 (258)
T 4fzw_A 82 DTRPQLW-ARLQAFNKPLIAAVNGYALGAGCELALLCDVVVAGENARFGLPEITLGIMPGAGGTQRLIRSVGKSLASKMV 160 (258)
T ss_dssp CSHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred hHHHHHH-HHHHHCCCCEEEEEcCcceeeeeEeecccceEEECCCCEEECcccCCCcCCCchHHHHHHHHhCHHHHHHHH
Confidence 2234555 679999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChh
Q 004918 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (724)
Q Consensus 164 ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (724)
+||++++|+||+++||||+|||++++++++.++++++++.++.+++
T Consensus 161 ltg~~i~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------------- 206 (258)
T 4fzw_A 161 LSGESITAQQAQQAGLVSDVFPSDLTLEYALQLASKMARHSPLALQ---------------------------------- 206 (258)
T ss_dssp HHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HcCCcCcHHHHHHCCCeeEEeCchHHHHHHHHHHHHHHhCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999875443
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+.+
T Consensus 207 --~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~AF~eKR~P~f~ 256 (258)
T 4fzw_A 207 --AAKQALRQSQEVALQAGLAQERQLFTLLAATEDRHEGISAFLQKRTPDFK 256 (258)
T ss_dssp --HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred --HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCCCCCCCC
Confidence 45778888889999999999999999999999999999999999998753
No 11
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1e-52 Score=437.92 Aligned_cols=257 Identities=32% Similarity=0.440 Sum_probs=239.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
-+||+|||+|+||++||.+++ +|++|++||++++.++++.+.+ .+..+++++.+++++++++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~~~~~~~~~l-----------------~~~~~~~i~~~~~~~~~~~ 73 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEKALEAAREQI-----------------PEELLSKIEFTTTLEKVKD 73 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHHS-----------------CGGGGGGEEEESSCTTGGG
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHHHHHHHHHHH-----------------HHHHhCCeEEeCCHHHHcC
Confidence 479999999999999999999 9999999999999988875430 2334567877888877999
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCHH
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQ 467 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e 467 (724)
||+|||||||+.++|+.+|+++++. +++|++||||++++++++..+.++.+++|+|||+|++.++++|+++++.|+++
T Consensus 74 aDlVieavpe~~~vk~~l~~~l~~~--~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~Pv~~~~lveiv~g~~t~~~ 151 (293)
T 1zej_A 74 CDIVMEAVFEDLNTKVEVLREVERL--TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMNPPHVMPLVEIVISRFTDSK 151 (293)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHTT--CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEEEEEECTTCCHH
T ss_pred CCEEEEcCcCCHHHHHHHHHHHhcC--CCCEEEEECCCcCHHHHHHHhhcccceEeEEecCccccCCEEEEECCCCCCHH
Confidence 9999999999999999999999887 89999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHH-HhcCCCc---cHHHHHHhhchHHH
Q 004918 468 VILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGVDVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVA 543 (724)
Q Consensus 468 ~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv~~~~ID~a~-~~~g~~~---Gp~~~~D~~Gld~~ 543 (724)
++++++++++.+|++|+++++. |++||++.++++||+.++++|+++++||.++ .++|+|+ |||+++|++|+|++
T Consensus 152 ~~~~~~~l~~~lGk~~v~v~d~--fi~Nrll~~~~~EA~~l~~~Gv~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~ 229 (293)
T 1zej_A 152 TVAFVEGFLRELGKEVVVCKGQ--SLVNRFNAAVLSEASRMIEEGVRAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVA 229 (293)
T ss_dssp HHHHHHHHHHHTTCEEEEEESS--CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHcCCeEEEeccc--ccHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHH
Confidence 9999999999999999999986 9999999999999999999999999999999 7999999 99999999999999
Q ss_pred HHHHHHHHHhCCCCCC-CcHHHHHHHHcCCCCcccCccceeccC
Q 004918 544 AATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKANGKGLYTYEK 586 (724)
Q Consensus 544 ~~~~~~l~~~~~~~~~-~~~~l~~~v~~g~~G~k~g~Gfy~y~~ 586 (724)
+++++.+++.++++.| |++++++||++|++|+|||+|||+|++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~~l~~~v~~G~lG~Ktg~Gfy~y~~ 273 (293)
T 1zej_A 230 YYASLYLYKRFGDEKFKPPEWLQEKIKKGEVGVKAGKGIYEYGP 273 (293)
T ss_dssp HHHHHHHHHHHCCGGGSCCHHHHHHHHTTCCBGGGTBSSSBCCT
T ss_pred HHHHHHHHHHcCCCcCCCCHHHHHHHHCCCCccccCCEeeecCc
Confidence 9999999999887444 889999999999999999999999964
No 12
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=100.00 E-value=2.8e-52 Score=437.38 Aligned_cols=275 Identities=28% Similarity=0.410 Sum_probs=255.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcC-CCCHHHHHHhhcCcccccCcc-C
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRG-KLTQDKANNALKMLKGVLDYS-E 384 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g-~~~~~~~~~~~~~i~~~~~~~-~ 384 (724)
.++||+|||+|.||++||..++++|++|++||++++.++++.+.+.+.+..+++.+ .++..+.+....++..+++++ +
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 47899999999999999999999999999999999999999999999998888888 788777777778888888884 6
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCC
Q 004918 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERT 464 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t 464 (724)
+++||+||+|||++.+.++.+++++.+.+++++||+||||++++++++..+.++.+++|+|||+|++.++++|++++..|
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~~~~~~la~~~~~~~~~ig~h~~~p~~~~~lvevv~~~~t 162 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSSTLLPSDLVGYTGRGDKFLALHFANHVWVNNTAEVMGTTKT 162 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSSCHHHHHHHHSCGGGEEEEEECSSTTTSCEEEEEECTTS
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEccCCCcccCceEEEEeCCCC
Confidence 89999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCeeEEE-cCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchH
Q 004918 465 SAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYG 541 (724)
Q Consensus 465 ~~e~~~~~~~l~~~lGk~~v~v-~d~pG~i~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~g~~~Gp~~~~D~~Gld 541 (724)
++++++.++++++.+|+.++++ ++.|||++||++.++++||++++++|+ ++++||+++ .++|+|||||+++|++|||
T Consensus 163 ~~~~~~~~~~l~~~~g~~~v~v~~~~~g~i~nr~~~~~~~ea~~l~~~g~~~~~~id~~~~~~~g~~~Gp~~~~D~~Gld 242 (283)
T 4e12_A 163 DPEVYQQVVEFASAIGMVPIELKKEKAGYVLNSLLVPLLDAAAELLVDGIADPETIDKTWRIGTGAPKGPFEIFDIVGLT 242 (283)
T ss_dssp CHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHCCSSCHHHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCCCEEehHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhccCCCcCHHHHHHhccHH
Confidence 9999999999999999999999 799999999999999999999999985 999999999 7999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCC-CcHHHHHHHHcCCCCcccCccceec
Q 004918 542 VAAATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGKANGKGLYTY 584 (724)
Q Consensus 542 ~~~~~~~~l~~~~~~~~~-~~~~l~~~v~~g~~G~k~g~Gfy~y 584 (724)
+++++.++ ..+++.+ |++++++||++|++|+|||+|||+|
T Consensus 243 ~~~~~~~~---~~~~~~~~~~~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 243 TAYNISSV---SGPKQREFAAYLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHHHT---SCHHHHHHHHHHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHhc---cccCcccCchHHHHHHHHCCCCceeCCeEeecC
Confidence 99999883 2222223 6789999999999999999999998
No 13
>3pea_A Enoyl-COA hydratase/isomerase family protein; structural genomics, center for structural genomics of infec diseases, csgid; HET: FLC PG4; 1.82A {Bacillus anthracis}
Probab=100.00 E-value=1.1e-51 Score=426.09 Aligned_cols=254 Identities=38% Similarity=0.624 Sum_probs=229.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccccc
Q 004918 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (724)
+++|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........+
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 83 (261)
T 3pea_A 5 LKFLSVRV-EDHIAVATLNHAPANAMSSQVMHDVTELIDQVEKDDNIRVVVIHGEGRFFSAGADIKEFTSVTEAKQATEL 83 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSSTTCCHHHHHHH
T ss_pred ccceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceeCCcCHHHHhhcCchhHHHHH
Confidence 46799999 89999999999966999999999999999999999999999999999999999999998653221111222
Q ss_pred chhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHH
Q 004918 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (724)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l 162 (724)
....+.++ .+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+|++|
T Consensus 84 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a~~l 162 (261)
T 3pea_A 84 AQLGQVTF-ERVEKCSKPVIAAIHGAALGGGLEFAMSCHMRFATESAKLGLPELTLGLIPGFAGTQRLPRYVGKAKACEM 162 (261)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 23334455 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (724)
++||++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 163 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 209 (261)
T 3pea_A 163 MLTSTPITGAEALKWGLVNGVFAEETFLDDTLKVAKQIAGKSPATAR--------------------------------- 209 (261)
T ss_dssp HHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|..
T Consensus 210 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~P~f 258 (261)
T 3pea_A 210 ---AVLELLQTTKSSHYYEGVQREAQIFGEVFTSEDGREGVAAFLEKRKPSF 258 (261)
T ss_dssp ---HHHHHHGGGCCHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 5677888888888999999999999999999999999999999998875
No 14
>3kqf_A Enoyl-COA hydratase/isomerase family protein; IDP02329, structural genomic for structural genomics of infectious diseases, csgid; HET: MSE; 1.80A {Bacillus anthracis}
Probab=100.00 E-value=1.3e-51 Score=426.40 Aligned_cols=256 Identities=27% Similarity=0.466 Sum_probs=231.0
Q ss_pred CCCCcEEEE-EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCCC
Q 004918 1 MAAPRVTME-VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (724)
Q Consensus 1 M~~~~v~~~-~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (724)
|++++|.++ . +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++.... ..
T Consensus 5 m~~~~v~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~-~~ 82 (265)
T 3kqf_A 5 LQLQNISVDYA-TPHVVKISLNRERQANSLSLALLEELQNILTQINEEANTRVVILTGAGEKAFCAGADLKERAGMN-EE 82 (265)
T ss_dssp --CCSEEEECC-STTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCHHHHTTCC-HH
T ss_pred ccCCeEEEEEe-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCeeeeCcChHHHhccC-HH
Confidence 678899999 7 8999999999996 6999999999999999999999999999999999 8999999999986531 11
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
....+....+.++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 83 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 161 (265)
T 3kqf_A 83 QVRHAVSMIRTTM-EMVEQLPQPVIAAINGIALGGGTELSLACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG 161 (265)
T ss_dssp HHHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCcEEECcccccCcCCCccHHHHHHHHhCHH
Confidence 1222333444556 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3kqf_A 162 RAKELIYTGRRISAQEAKEYGLVEFVVPVHLLEEKAIEIAEKIASNGPIAVR---------------------------- 213 (265)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 214 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3kqf_A 214 --------LAKEAISNGIQVDLHTGLQMEKQAYEGVIHTKDRLEGLQAFKEKRTPMYK 263 (265)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56788888888999999999999999999999999999999999988753
No 15
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=100.00 E-value=9.2e-51 Score=430.30 Aligned_cols=283 Identities=33% Similarity=0.527 Sum_probs=261.1
Q ss_pred CCCCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHH-----HHHHhhcCcc
Q 004918 303 LKPRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-----KANNALKMLK 377 (724)
Q Consensus 303 ~~~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-----~~~~~~~~i~ 377 (724)
.|..+|+||+|||+|.||.+||..|+++|++|++||+++++++++.+.+++.++..++.|.++.. +......++.
T Consensus 10 ~~~~~~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~~~~~~i~ 89 (302)
T 1f0y_A 10 AKKIIVKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIA 89 (302)
T ss_dssp --CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEE
T ss_pred cccccCCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCccccchhhHHHHHhceE
Confidence 34556889999999999999999999999999999999999999888888888888888887654 4445566788
Q ss_pred cccCcc-CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCee
Q 004918 378 GVLDYS-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLL 456 (724)
Q Consensus 378 ~~~~~~-~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lv 456 (724)
.+++++ ++++||+||+|||++.++++++++++.+.+++++||+||+|++++++++..+.++++++++||++|++.++++
T Consensus 90 ~~~~~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i~~~~l~~~~~~~~~~~g~h~~~P~~~~~~~ 169 (302)
T 1f0y_A 90 TSTDAASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSLQITSIANATTRQDRFAGLHFFNPVPVMKLV 169 (302)
T ss_dssp EESCHHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSSCHHHHHTTSSCGGGEEEEEECSSTTTCCEE
T ss_pred EecCHHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHhcCCcccEEEEecCCCcccCceE
Confidence 888885 7899999999999999999999999999999999999999999999999988888999999999999999999
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcC-CCHHHHHHHH-HhcCCCccHHHH
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLG-VDVFRIDSAI-RSFGLPIGPFQL 534 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~G-v~~~~ID~a~-~~~g~~~Gp~~~ 534 (724)
|+++++.+++++++.+.++++.+|+.++++++.|||++||++.++++|+++++++| +++++||.++ .++|||+|||++
T Consensus 170 ~i~~g~~~~~e~~~~~~~l~~~~G~~~v~~~~~~g~i~nr~l~~~~~Ea~~l~~~g~~~~~~id~~~~~g~g~p~GP~~~ 249 (302)
T 1f0y_A 170 EVIKTPMTSQKTFESLVDFSKALGKHPVSCKDTPGFIVNRLLVPYLMEAIRLYERGDASKEDIDTAMKLGAGYPMGPFEL 249 (302)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHTTCEEEEECSCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHCCSSCHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHHHcCCceEEecCcccccHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999997 5999999999 799999999999
Q ss_pred HHhhchHHHHHHHHHHHHhC-CCCCC-CcHHHHHHHHcCCCCcccCccceecc
Q 004918 535 LDLAGYGVAAATSKEFDKAF-PDRSF-QSPLVDLLLKSGRNGKANGKGLYTYE 585 (724)
Q Consensus 535 ~D~~Gld~~~~~~~~l~~~~-~~~~~-~~~~l~~~v~~g~~G~k~g~Gfy~y~ 585 (724)
+|.+|+|+++++++.+++.+ +++.| |++++++|+++|++|+|||+|||+|+
T Consensus 250 ~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~G~k~g~Gfy~y~ 302 (302)
T 1f0y_A 250 LDYVGLDTTKFIVDGWHEMDAENPLHQPSPSLNKLVAENKFGKKTGEGFYKYK 302 (302)
T ss_dssp HHHHCHHHHHHHHHHHHHTTTTCGGGCCCHHHHHHHHTTCCBTTTTBSSSBCC
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCccCcCHHHHHHHHcCCCccccCcEeeeCC
Confidence 99999999999999999988 77544 88999999999999999999999994
No 16
>3i47_A Enoyl COA hydratase/isomerase (crotonase); structural genomics; 1.58A {Legionella pneumophila subsp} SCOP: c.14.1.0
Probab=100.00 E-value=2.1e-51 Score=424.92 Aligned_cols=257 Identities=21% Similarity=0.310 Sum_probs=229.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc-
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (724)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 1 M~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 79 (268)
T 3i47_A 1 MSLSDLLYEI-QDKVGLLTMNRISKHNAFDNQLLTEMRIRLDSAINDTNVRVIVLKANGKHFSAGADLTWMQSMANFTEE 79 (268)
T ss_dssp -CCCSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECSSCSBCSBCHHHHHHHHTCCHH
T ss_pred CCCCEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCeeCCCChhhhhccccccHH
Confidence 8999999999 8999999999996 699999999999999999999999999999999999999999999875322111
Q ss_pred -ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
.........+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~ 157 (268)
T 3i47_A 80 ENLEDSLVLGNLM-YSISQSPKPTIAMVQGAAFGGGAGLAAACDIAIASTSARFCFSEVKLGLIPAVISP-YVVRAIGER 157 (268)
T ss_dssp HHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCTTTHH-HHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEhHhHHHHHhCCEEEEcCCCEEECcccccCCCcccHHH-HHHHHhCHH
Confidence 111122344555 67999999999999999999999999999999999999999999999999999987 799999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 158 ~A~~llltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 209 (268)
T 3i47_A 158 AAKMLFMSAEVFDATRAYSLNLVQHCVPDDTLLEFTLKYASQISNNAPEAVK---------------------------- 209 (268)
T ss_dssp HHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999999875443
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYS-GVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~-~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.....++++ .++.|.+.+..++.|+|++|++++|++||+|....
T Consensus 210 --------~~K~~l~~~~~~~l~~~~~~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 261 (268)
T 3i47_A 210 --------NSKQLAQYVANKKIDEELVRYTASLIAHKRVSDEGQEGLKAFLNKEIPNWNE 261 (268)
T ss_dssp --------HHHHHHHHHTTCCCSHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTCCCTTC-
T ss_pred --------HHHHHHHhhhcCChhHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 4577888888888887 78999999999999999999999999999998654
No 17
>3hin_A Putative 3-hydroxybutyryl-COA dehydratase; structural genomics, protein structure INI NEW YORK structural genomix research consortium; 2.00A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1e-51 Score=428.07 Aligned_cols=255 Identities=24% Similarity=0.383 Sum_probs=228.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (724)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++++ |+++|+|||||.|++||+|+|++++..... ...
T Consensus 13 m~~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~--d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~-~~~ 88 (275)
T 3hin_A 13 ADPSTLVVDT-VGPVLTIGLNRPKKRNALNDGLMAALKDCLTDI--PDQIRAVVIHGIGDHFSAGLDLSELRERDA-TEG 88 (275)
T ss_dssp CCGGGEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHTSSC--CTTCCEEEEEESSSCSBCCBCGGGCCCCCH-HHH
T ss_pred CCCCeEEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHh--CcCceEEEEECCCCCccCCCCHHHHhccCh-hhH
Confidence 6678899999 7999999999995 8999999999999999999 679999999999999999999999864211 111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
.......++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 89 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 167 (275)
T 3hin_A 89 LVHSQTWHRVF-DKIQYCRVPVIAALKGAVIGGGLELACAAHIRVAEASAYYALPEGSRGIFVGGGGSVRLPRLIGVARM 167 (275)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHH
Confidence 12223344556 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++|+|+||+++||||+|||++++.+++.++|++|++.++.+++
T Consensus 168 ~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~ia~~~p~a~~------------------------------ 217 (275)
T 3hin_A 168 ADMMLTGRVYSAAEGVVHGFSQYLIENGSAYDKALELGNRVAQNAPLTNF------------------------------ 217 (275)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEESSSCHHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCCCEEeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|+...
T Consensus 218 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~~ 268 (275)
T 3hin_A 218 ------AVLQALPMIAEANPQTGLLMESLMATVAQSDQEAKTRIRAFLDHKTAKVRE 268 (275)
T ss_dssp ------HHHTHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHC--
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 457788888888999999999999999999999999999999999998754
No 18
>3moy_A Probable enoyl-COA hydratase; ssgcid, seattle structural genomics center for infectious DI enoyl COA, actinobacteria, lyase; 1.50A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.3e-51 Score=423.69 Aligned_cols=254 Identities=32% Similarity=0.450 Sum_probs=230.4
Q ss_pred CCCCcEEEEEecCc-EEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc
Q 004918 1 MAAPRVTMEVGNDG-VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (724)
Q Consensus 1 M~~~~v~~~~~~~~-v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (724)
|+++.|.++. +++ |++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 6 m~~~~i~~~~-~~~gv~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~- 83 (263)
T 3moy_A 6 TTYTTIATSR-PVAGVGLIRLDRPDALNALNQTLEAEVLDAARDFDADLEIGAIVVTGSERAFAAGADIAEMVTLTPHQ- 83 (263)
T ss_dssp CCCSSEEEEC-CSTTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEEESBCHHHHTTCCHHH-
T ss_pred CCCCeEEEEE-eCCeEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCeeCCcChHHHhccCchh-
Confidence 6788899999 566 9999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
........++ +.|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+
T Consensus 84 --~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 160 (263)
T 3moy_A 84 --ARERNLLSGW-DSLTQVRKPIVAAVAGYALGGGCELAMLCDLVIAADTARFGQPEITLGILPGLGGTQRLTRAVGKAK 160 (263)
T ss_dssp --HHHTTTTHHH-HHHTTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCSSSTTTHHHHHHCHHH
T ss_pred --HHHHHHHHHH-HHHHhCCCCEEEEECCEeehHHHHHHHHCCEEEecCCCEEeCcccccCCCCchhHHHHHHHHhCHHH
Confidence 1122233455 6799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (724)
|++|++||++++|+||+++||||+|||++++.+++.++|++++..++.+++
T Consensus 161 A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 211 (263)
T 3moy_A 161 AMDLCLTGRSLTAEEAERVGLVSRIVPAADLLDEALAVAQRIARMSRPAGR----------------------------- 211 (263)
T ss_dssp HHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCchHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875433
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 212 -------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 261 (263)
T 3moy_A 212 -------AVKDAINEAFERPLSAGMRYERDAFYAMFDTHDQTEGMTAFLEKRTPEFT 261 (263)
T ss_dssp -------HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCCCCC
Confidence 56788888888999999999999999999999999999999999988753
No 19
>3h81_A Enoyl-COA hydratase ECHA8; niaid, decode, infectious disease, MPCS, fatty acid metaboli metabolism, lyase, structural genomics; 1.80A {Mycobacterium tuberculosis} PDB: 3q0j_A* 3pzk_A 3q0g_A*
Probab=100.00 E-value=3.5e-51 Score=424.73 Aligned_cols=254 Identities=30% Similarity=0.490 Sum_probs=228.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (724)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-- 98 (278)
T 3h81_A 22 MTYETILVER-DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFAD-- 98 (278)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCBCSHHHHTCCHHH--
T ss_pred CCCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCeecCcCHHHHhccChhh--
Confidence 7788899999 7899999999996 69999999999999999999999999999999999999999999986532111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
....... ..+ .+|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++|..+|
T Consensus 99 ~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A 176 (278)
T 3h81_A 99 AFTADFF-ATW-GKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKA 176 (278)
T ss_dssp HHHHTTT-GGG-HHHHTCCSCEEEEECBEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHH-HHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEECchhhcCcCCCccHHHHHHHHhCHHHH
Confidence 0011111 124 56899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|||++++.+++.++|++|++.++.+++
T Consensus 177 ~~l~ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------ 226 (278)
T 3h81_A 177 MDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTISQMSASAAR------------------------------ 226 (278)
T ss_dssp HHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875443
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 227 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 276 (278)
T 3h81_A 227 ------MAKEAVNRAFESSLSEGLLYERRLFHSAFATEDQSEGMAAFIEKRAPQFT 276 (278)
T ss_dssp ------HHHHHHHHTTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 56788888888999999999999999999999999999999999988753
No 20
>3gow_A PAAG, probable enoyl-COA hydratase; the spiral fold, the crotonase superfamily, lyase; 1.85A {Thermus thermophilus HB8} PDB: 3hrx_A
Probab=100.00 E-value=1.9e-50 Score=415.26 Aligned_cols=250 Identities=29% Similarity=0.378 Sum_probs=227.4
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccch
Q 004918 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPD 84 (724)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (724)
|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .........
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~--~~~~~~~~~ 78 (254)
T 3gow_A 2 VLKER-QDGVLVLTLNRPEKLNAITGELLDALYAALKEGEEDREVRALLLTGAGRAFSAGQDLTEFGDR--KPDYEAHLR 78 (254)
T ss_dssp EEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGTTTS--CCCHHHHTH
T ss_pred eEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCcccCCCChHHHhhc--chhHHHHHH
Confidence 67788 7899999999995 7999999999999999999999999999999999999999999998653 111222223
Q ss_pred hHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHH
Q 004918 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMML 164 (724)
Q Consensus 85 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~l 164 (724)
..++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|++
T Consensus 79 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l~l 157 (254)
T 3gow_A 79 RYNRVV-EALSGLEKPLVVAVNGVAAGAGMSLALWGDLRLAAVGASFTTAFVRIGLVPDSGLSFLLPRLVGLAKAQELLL 157 (254)
T ss_dssp HHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHHHHHHH
Confidence 344566 6799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhH
Q 004918 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQH 244 (724)
Q Consensus 165 tg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 244 (724)
||++++|+||+++||||+|||++++.+++.++++++++.|+.+++
T Consensus 158 tg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------------- 202 (254)
T 3gow_A 158 LSPRLSAEEALALGLVHRVVPAEKLMEEALSLAKELAQGPTRAYA----------------------------------- 202 (254)
T ss_dssp HCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------------
T ss_pred cCCccCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH-----------------------------------
Confidence 999999999999999999999999999999999999998875443
Q ss_pred HHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 245 QACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++||+|...
T Consensus 203 -~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 252 (254)
T 3gow_A 203 -LTKKLLLETYRLSLTEALALEAVLQGQAGQTQDHEEGVRAFREKRPPRFQ 252 (254)
T ss_dssp -HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -HHHHHHHHhhhCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888999999999999999999999999999999999988753
No 21
>3fdu_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2; 2.00A {Acinetobacter baumannii}
Probab=100.00 E-value=1.9e-50 Score=417.62 Aligned_cols=253 Identities=22% Similarity=0.345 Sum_probs=218.0
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhh---hccC
Q 004918 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQ---KVHG 75 (724)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~---~~~~ 75 (724)
|| ++.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++. ....
T Consensus 1 Ms~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 79 (266)
T 3fdu_A 1 MSLHPHLNANL-EGGVLTLAINRPEAKNALYGELYLWIAKALDEADQNKDVRVVVLRGAEHDFTAGNDMKDFMGFVQNPN 79 (266)
T ss_dssp -CCCTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHHHHHHSCC
T ss_pred CCCCCeEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeECCcCHHHHhhhccccc
Confidence 65 56899999 8999999999995 89999999999999999999999999999999999999999999987 3222
Q ss_pred CCcccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccccc
Q 004918 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (724)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G 155 (724)
.. .........++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 80 ~~--~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 156 (266)
T 3fdu_A 80 AG--PAGQVPPFVLL-KSAARLSKPLIIAVKGVAIGIGVTILLQADLVFADNTALFQIPFVSLGLSPEGGASQLLVKQAG 156 (266)
T ss_dssp CS--CGGGSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEECTTCEEECCTTTTTCCCCTTHHHHHHHHHC
T ss_pred hh--hHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECchhhhCCCCcchHHHHHHHHhC
Confidence 11 12233445666 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (724)
..+|++|++||++++|+||+++||||+||| ++.+++.++|++|++.|+.+++
T Consensus 157 ~~~A~~l~ltg~~i~A~eA~~~GLv~~vv~--~l~~~a~~~a~~la~~~~~a~~-------------------------- 208 (266)
T 3fdu_A 157 YHKAAELLFTAKKFNAETALQAGLVNEIVE--DAYATAQATAQHLTALPLASLK-------------------------- 208 (266)
T ss_dssp HHHHHHHHHHCCEECHHHHHHTTSCSEECS--CHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHCCCHHHHHH--HHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999998 8999999999999999876543
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++... .+++++++.|.+.+..++.|+|++|++++|++||+|...+
T Consensus 209 ----------~~K~~l~~~~-~~l~~~l~~e~~~~~~~~~s~d~~eg~~aF~ekR~p~~~~ 258 (266)
T 3fdu_A 209 ----------QTKALMKHDL-DQIIECIDHEAEIFMQRVQSPEMLEAVQAFMQKRQPDFSQ 258 (266)
T ss_dssp ----------HHHHHHTTTH-HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHC---------
T ss_pred ----------HHHHHHHhhh-ccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 3455665554 4688999999999999999999999999999999998765
No 22
>3swx_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium abscessus}
Probab=100.00 E-value=8e-51 Score=420.72 Aligned_cols=256 Identities=24% Similarity=0.333 Sum_probs=227.0
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc
Q 004918 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (724)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (724)
|+ ++.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|+.||+|+|++++........
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 83 (265)
T 3swx_A 5 MSDYETLRIRR-DGYVLVIGLNRPAKRNAFDKTMLEELALALGEYETDTDLRAAVLYGEGPLFTAGLDLASVAAEIQGGA 83 (265)
T ss_dssp --CCSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHC--C
T ss_pred CCCCceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCcccCcChHHHhhcccchh
Confidence 55 57899999 7999999999995 799999999999999999999999999999999999999999999875432211
Q ss_pred ccccchhHHHHHHHHH-hcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 79 VSLMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l-~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
..+.....+.+ ..+ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 84 -~~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 161 (265)
T 3swx_A 84 -SLTPEGGINPW-QVDGRQLSKPLLVAVHGKVLTLGIELALAADIVIADETATFAQLEVNRGIYPFGGATIRFPRTAGWG 161 (265)
T ss_dssp -CCCCTTCCCTT-CCSSCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTSCCCSSHHHHHHHHHCHH
T ss_pred -HHHHHHHHHHH-HHHHHhCCCCEEEEEcCeeehHHHHHHHHCCEEEEcCCCEEECcccccccCCCccHHHHHHHHhhHH
Confidence 11112222334 457 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|+|++++.+++.++|+++++.++.+++
T Consensus 162 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 213 (265)
T 3swx_A 162 NAMRWMLTADTFDAVEAHRIGIVQEIVPVGEHVDTAIAIAQTIARQAPLGVQ---------------------------- 213 (265)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCcCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHcCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875443
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 214 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3swx_A 214 --------ATLRNARLAVREGDAAAEEQLVPTVRELFTSEDATLGVQAFLSRTTAEFV 263 (265)
T ss_dssp --------HHHHHHHHHHHHCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 45677888777889999999999999999999999999999999988753
No 23
>3lke_A Enoyl-COA hydratase; nysgrc, target 112 structural genomics, PSI-2, protein structure initiative; 1.70A {Bacillus halodurans}
Probab=100.00 E-value=6.1e-51 Score=420.88 Aligned_cols=256 Identities=21% Similarity=0.305 Sum_probs=223.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCc-cCCCCchhhhh--c-cC
Q 004918 1 MAAPRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRF-SGGFDINVFQK--V-HG 75 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F-~aG~Dl~~~~~--~-~~ 75 (724)
||++.|.++. +++|++|||||| +.|++|.+|+++|.++++.++.|+++|+|||||.|+.| |+|+|++++.. . ..
T Consensus 1 Ms~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FF~aG~Dl~~~~~~~~~~~ 79 (263)
T 3lke_A 1 MSLSYVHTEI-QNDALYITLDYPEKKNGLDAELGTSLLEAIRAGNNETSIHSIILQSKHRAYFSSGPRLEDLLICASDQS 79 (263)
T ss_dssp --CCSEEEEE-CSSEEEEEECCGGGTTBCCHHHHHHHHHHHHHHHHCSSCCEEEEEESCTTEEECBSCHHHHHHHHHCSS
T ss_pred CCCcEEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCceEecCcCHHHHHhhcccCC
Confidence 8999999999 899999999999 58999999999999999999999999999999999999 99999999875 2 11
Q ss_pred CCcccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccccc
Q 004918 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (724)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G 155 (724)
......+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 80 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vG 158 (263)
T 3lke_A 80 DVRLREVLHVLNHCV-LEIFTSPKVTVALINGYAYGGGFNMMLACDRRIALRRAKFLENFHKMGISPDLGASYFLPRIIG 158 (263)
T ss_dssp SHHHHHHHHHHHHHH-HHHHTCSSEEEEEECSEEETHHHHGGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEeeHHHHHHHHHCCEEEEcCCCEEeCchHhhCCCCCccHHHHHHHHhC
Confidence 111222333445566 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecC-cchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVT-SEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~-~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (724)
..+|++|++||++++|+||+++||||+||| ++++.+++.++|+++++.|+.+++
T Consensus 159 ~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (263)
T 3lke_A 159 YEQTMNLLLEGKLFTSEEALRLGLIQEICENKQELQERVKNYLKAVSEGYVPAIA------------------------- 213 (263)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCCcEecCChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 999999999999999999999999999999 999999999999999999875443
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++++++.+
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~~~~~~~ 262 (263)
T 3lke_A 214 -----------ATKKLLKGKAAEELKQQLEQETEELVALFKQTEIKKRLEALVEGHHHHH 262 (263)
T ss_dssp -----------HHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHC--------
T ss_pred -----------HHHHHHHHhhhcCHHHHHHHHHHHHHHHhcCHHHHHHHHhhhccCCCCC
Confidence 4567788777778999999999999999999999999999999998764
No 24
>3myb_A Enoyl-COA hydratase; ssgcid, struct genomics, seattle structural genomics center for infectious lyase; 1.55A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.5e-50 Score=420.45 Aligned_cols=256 Identities=21% Similarity=0.306 Sum_probs=228.2
Q ss_pred CCCCcEEEEEec--CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCC
Q 004918 1 MAAPRVTMEVGN--DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG 77 (724)
Q Consensus 1 M~~~~v~~~~~~--~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~ 77 (724)
|+++ |.++. + ++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 22 m~~~-v~~~~-~~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~ 99 (286)
T 3myb_A 22 MSEP-LLLQD-RDERGVVTLTLNRPQAFNALSEAMLAALGEAFGTLAEDESVRAVVLAASGKAFCAGHDLKEMRAEPSRE 99 (286)
T ss_dssp --CC-SEEEE-ECTTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSSCSBCCBCHHHHHSSCCHH
T ss_pred Ccee-EEEEE-ecCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcChhhhhccccHH
Confidence 6665 88888 6 899999999996 69999999999999999999999999999999999999999999987521111
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
....+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ ++|++++|+|++|..
T Consensus 100 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~-~~g~~~~L~r~vG~~ 177 (286)
T 3myb_A 100 YYEKLFARCTDVM-LAIQRLPAPVIARVHGIATAAGCQLVAMCDLAVATRDARFAVSGINVGLF-CSTPGVALSRNVGRK 177 (286)
T ss_dssp HHHHHHHHHHHHH-HHHHHSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCC-CHHHHHHHTTTSCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeehHHHHHHHHhCCEEEEcCCCEEECcccccCCC-CchHHHHHHHHcCHH
Confidence 1122333345556 67999999999999999999999999999999999999999999999999 788899999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 178 ~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 229 (286)
T 3myb_A 178 AAFEMLVTGEFVSADDAKGLGLVNRVVAPKALDDEIEAMVSKIVAKPRAAVA---------------------------- 229 (286)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHHSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+...
T Consensus 230 --------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~aFlekr~p~f~g 280 (286)
T 3myb_A 230 --------MGKALFYRQIETDIESAYADAGTTMACNMMDPSALEGVSAFLEKRRPEWHT 280 (286)
T ss_dssp --------HHHHHHHHHHTSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHTTSCCCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCCCC
Confidence 457788888888999999999999999999999999999999999988654
No 25
>3p5m_A Enoyl-COA hydratase/isomerase; seattle structural genomics center for infectious disease, S coenzyme A, tuberculosis; 2.05A {Mycobacterium avium}
Probab=100.00 E-value=3.2e-50 Score=413.60 Aligned_cols=246 Identities=23% Similarity=0.323 Sum_probs=224.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccccc
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (724)
+.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .+
T Consensus 6 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-------~~ 77 (255)
T 3p5m_A 6 NGISVEH-DGAVLRIRLDRPEKLNAVDTPMLEELSVHIRDAEADESVRAVLLTGAGRAFCSGGDLTGGDTA-------GA 77 (255)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCEECC---CHH-------HH
T ss_pred ceEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCCChhhhcch-------HH
Confidence 4688998 8899999999996 6999999999999999999999999999999999999999999987621 22
Q ss_pred chhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHH
Q 004918 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (724)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l 162 (724)
....+.++ +++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|
T Consensus 78 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~l 156 (255)
T 3p5m_A 78 ADAANRVV-RAITSLPKPVIAGVHGAAVGFGCSLALACDLVVAAPASYFQLAFTRVGLMPDGGASALLPLLIGRARTSRM 156 (255)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECGGGGGTCCCCTTHHHHTHHHHCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEeCCeehhhHHHHHHHCCEEEEcCCcEEeCcccccCcCCCccHHHHHHHHhCHHHHHHH
Confidence 33444566 67999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (724)
++||++++|+||+++||||+|+|++++.+++.+++++++..|+.+++
T Consensus 157 ~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 203 (255)
T 3p5m_A 157 AMTAEKISAATAFEWGMISHITSADEYESVLTDVLRSVSGGPTLAFG--------------------------------- 203 (255)
T ss_dssp HHHCCCEEHHHHHHTTSCSEECCTTCHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCCcCHHHHHHCCCCCEeeCHHHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875443
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+.
T Consensus 204 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 252 (255)
T 3p5m_A 204 ---WTKRALAAATLAELEPVQAIEAEGQLALVETADFREGARAFRERRTPNF 252 (255)
T ss_dssp ---HHHHHHHHHHCTTHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 4677888888889999999999999999999999999999999998775
No 26
>3g64_A Putative enoyl-COA hydratase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; 2.05A {Streptomyces coelicolor A3}
Probab=100.00 E-value=4.7e-50 Score=418.11 Aligned_cols=255 Identities=25% Similarity=0.361 Sum_probs=230.3
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcc--
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV-- 79 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~-- 79 (724)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++.........
T Consensus 16 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 94 (279)
T 3g64_A 16 WRHLRVEI-TDGVATVTLARPDKLNALTFEAYADLRDLLAELSRRRAVRALVLAGEGRGFCSGGDVDEIIGATLSMDTAR 94 (279)
T ss_dssp CSSEEEEE-ETTEEEEEESCGGGTTCBCHHHHHHHHHHHHHHHHTTCCSEEEEEECSSCSBCCBCTTTTHHHHTTCCHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCceecCcCHHHHhhccccchhhH
Confidence 45799999 7899999999996 7999999999999999999999999999999999999999999998764332211
Q ss_pred -cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCcc-CCcchhhhhcccccHH
Q 004918 80 -SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVI-PGFGGTQRLPRLVGLS 157 (724)
Q Consensus 80 -~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~-P~~g~~~~l~r~~G~~ 157 (724)
..+....+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++ |++|++++|+|++|..
T Consensus 95 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~p~~g~~~~l~r~vG~~ 173 (279)
T 3g64_A 95 LLDFNRMTGQVV-RAVRECPFPVIAALHGVAAGAGAVLALAADFRVADPSTRFAFLFTRVGLSGGDMGAAYLLPRVVGLG 173 (279)
T ss_dssp HHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCSCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEEcCeeccccHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchhHHHHHHHHhCHH
Confidence 11222334555 67999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 174 ~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 225 (279)
T 3g64_A 174 HATRLLMLGDTVRAPEAERIGLISELTEEGRADEAARTLARRLADGPALAHA---------------------------- 225 (279)
T ss_dssp HHHHHHHHCCCEEHHHHHHHTCCSEECCTTCHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCcCHHHHHHCCCCCEecCchHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875443
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|+.++.....+++++++.|...+..++.|+|++|++++|++||+|+..
T Consensus 226 --------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 275 (279)
T 3g64_A 226 --------QTKALLTAELDMPLAAAVELDASTQALLMTGEDYAEFHAAFTEKRPPKWQ 275 (279)
T ss_dssp --------HHHHHHHHHTTSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCCC
T ss_pred --------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 45778888888899999999999999999999999999999999988764
No 27
>1nzy_A Dehalogenase, 4-chlorobenzoyl coenzyme A dehalogenase; lyase; HET: BCA; 1.80A {Pseudomonas SP} SCOP: c.14.1.3 PDB: 1jxz_A* 1nzy_B*
Probab=100.00 E-value=2.4e-50 Score=418.38 Aligned_cols=257 Identities=24% Similarity=0.321 Sum_probs=228.5
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccC---C
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG---A 76 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~---~ 76 (724)
|+ +.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 1 m~-~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 78 (269)
T 1nzy_A 1 MY-EAIGHRV-EDGVAEITIKLPRHRNALSVKAMQEVTDALNRAEEDDSVGAVMITGAEDAFCAGFYLREIPLDKGVAGV 78 (269)
T ss_dssp CC-SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCGGGSCSSSHHHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCCCCcccCcCHHHHhhcccccCh
Confidence 65 5688988 7899999999995 899999999999999999999999999999999999999999998754210 0
Q ss_pred Ccc-cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccccc
Q 004918 77 GDV-SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (724)
Q Consensus 77 ~~~-~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G 155 (724)
.+. ..+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|
T Consensus 79 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 157 (269)
T 1nzy_A 79 RDHFRIAALWWHQMI-HKIIRVKRPVLAAINGVAAGGGLGISLASDMAICADSAKFVCAWHTIGIGNDTATSYSLARIVG 157 (269)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEeCcccccCCCCCccHHHHHHHHhh
Confidence 000 11222244555 6689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (724)
..+|++|++||++++|+||+++||||+|+|++++.+++.++++++++.++.+++
T Consensus 158 ~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~-------------------------- 211 (269)
T 1nzy_A 158 MRRAMELMLTNRTLYPEEAKDWGLVSRVYPKDEFREVAWKVARELAAAPTHLQV-------------------------- 211 (269)
T ss_dssp HHHHHHHHHHCCCBCHHHHHHHTSCSCEECHHHHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999998875432
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+...
T Consensus 212 ----------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f~~ 262 (269)
T 1nzy_A 212 ----------MAKERFHAGWMQPVEECTEFEIQNVIASVTHPHFMPCLTRFLDGHRADRPQ 262 (269)
T ss_dssp ----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHSTTHHHHHHHHHTTCCTTCCS
T ss_pred ----------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCC
Confidence 456778888888999999999999999999999999999999999988654
No 28
>3sll_A Probable enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.35A {Mycobacterium abscessus}
Probab=100.00 E-value=4.5e-50 Score=419.67 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=222.9
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc----
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD---- 78 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~---- 78 (724)
..|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 24 ~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~~~~ 102 (290)
T 3sll_A 24 FVLVDRP-RPEIALVTLNRPERMNAMAFDVMLPFKQMLVDISHDNDVRAVVITGAGKGFCSGADQKSAGPIPHIGGLTQP 102 (290)
T ss_dssp CEEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCC------CCCSSCTTCCHH
T ss_pred eEEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEECCCCCeeCCcChHHHhcccccccccch
Confidence 4577888 8999999999996 899999999999999999999999999999999999999999999865432211
Q ss_pred --ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCC-cchhhhhccccc
Q 004918 79 --VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPG-FGGTQRLPRLVG 155 (724)
Q Consensus 79 --~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~-~g~~~~l~r~~G 155 (724)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+ +|++++|+|++|
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~L~r~vG 181 (290)
T 3sll_A 103 TIALRSMELLDEVI-LTLRRMHQPVIAAINGAAIGGGLCLALACDVRVASQDAYFRAAGINNGLTASELGLSYLLPRAIG 181 (290)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTTTTTTSCSCCTTHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeehHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCcccHHHHHHHHhC
Confidence 111223344555 6799999999999999999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (724)
..+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 182 ~~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 235 (290)
T 3sll_A 182 TSRASDIMLTGRDVDADEAERIGLVSRKVASESLLEECYAIGERIAGFSRPGIE-------------------------- 235 (290)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHHSCHHHHH--------------------------
T ss_pred HHHHHHHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999875443
Q ss_pred HhCCCChhHHHHHHHHHHhhc-CCHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHhhhhcCC
Q 004918 236 KTAPNMPQHQACLDVIEEGIV-HGGYSGVLKEAKVFKELV-MLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~-~~~~~~l~~E~~~~~~~~-~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.... .+++++++.|...+..++ .|+|++|++++|++||+|+..
T Consensus 236 ----------~~K~~l~~~~~~~~l~~~l~~e~~~~~~~~~~s~d~~eg~~AFlekR~P~f~ 287 (290)
T 3sll_A 236 ----------LTKRTIWSGLDAASLESHMHQEGLGQLYVRLLTDNFEEATAARKEKRPAEFR 287 (290)
T ss_dssp ----------HHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTTSCCCCC
T ss_pred ----------HHHHHHHhhcccCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888 899999999999999999 999999999999999988754
No 29
>3qmj_A Enoyl-COA hydratase, ECHA8_6; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=1e-50 Score=418.03 Aligned_cols=251 Identities=24% Similarity=0.297 Sum_probs=189.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccc
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (724)
+..|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++...........
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (256)
T 3qmj_A 5 MVTLQIDD-DNRVRTLTLNRPEALNAFNEALYDATAQALLDAADDPQVAVVLLTGSGRGFSAGTDLAEMQARITDPNFSE 83 (256)
T ss_dssp -CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCHHHHHHHHHSSSCCC
T ss_pred cceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccchhHHH
Confidence 35688998 8999999999996 699999999999999999999999999999999999999999999875432222223
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
.....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 84 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 162 (256)
T 3qmj_A 84 GKFGFRGLI-KALAGFPKPLICAVNGLGVGIGATILGYADLAFMSSTARLKCPFTSLGVAPEAASSYLLPQLVGRQNAAW 162 (256)
T ss_dssp CSSHHHHHH-HHHHHCCSCEEEEECSEEETHHHHGGGGCSEEEEETTCEEECCGGGC---CCTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEeCCCEEECcccccCCCCCccHHHHHHHHhCHHHHHH
Confidence 344455666 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|++||++++|+||+++||||+|+|++++.+++.++|+++++.|+.+++
T Consensus 163 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 210 (256)
T 3qmj_A 163 LLMSSEWIDAEEALRMGLVWRICSPEELLPEARRHAEILAAKPISSLM-------------------------------- 210 (256)
T ss_dssp HHHSCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCccEEeCHhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875433
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004918 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~ 291 (724)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+
T Consensus 211 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 256 (256)
T 3qmj_A 211 ----AVKHTMVEPNRAQIAAASARENAHFAELMGAQANAAALADFTDRRR 256 (256)
T ss_dssp ----HHHHHHHCC-------------------------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHccCC
Confidence 4577888888888999999999999999999999999999999985
No 30
>3rsi_A Putative enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Mycobacterium abscessus}
Probab=100.00 E-value=8.6e-50 Score=413.01 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=220.4
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc
Q 004918 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (724)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (724)
|+ ++.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++ ... . ..
T Consensus 5 m~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~--~-~~ 79 (265)
T 3rsi_A 5 MSAARELLVER-DGPVVILTMNRPHRRNALSTNMVSQFAAAWDEIDHDDGIRAAILTGAGSAYCVGGDLS-DGW--M-VR 79 (265)
T ss_dssp ----CCEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC-------------
T ss_pred CCCCCcEEEEE-ECCEEEEEEcCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCCC-ccc--c-cc
Confidence 54 56799999 7899999999995 79999999999999999999999999999999999999999998 221 1 11
Q ss_pred ccccchhHHH-HHHHHH-h--cCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccc
Q 004918 79 VSLMPDVSVE-LVVNLI-E--DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV 154 (724)
Q Consensus 79 ~~~~~~~~~~-~~~~~l-~--~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~ 154 (724)
...+...... ++ ..+ . ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++
T Consensus 80 ~~~~~~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~v 158 (265)
T 3rsi_A 80 DGSAPPLDPATIG-KGLLLSHTLTKPLIAAVNGACLGGGCEMLQQTDIRVSDEHATFGLPEVQRGLVPGAGSMVRLKRQI 158 (265)
T ss_dssp -----CCCHHHHH-HHTTSSCCCSSCEEEEECSCEETHHHHHHTTCSEEEEETTCEEECGGGGGTCCCTTTHHHHHHHHS
T ss_pred hHHHHHHhHHHHH-HHHHHhcCCCCCEEEEECCeeeHHHHHHHHHCCEEEecCCCEEECchhccCCCCCccHHHHHHHHh
Confidence 1122222334 55 668 8 99999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004918 155 GLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (724)
Q Consensus 155 G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (724)
|..+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 159 G~~~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 213 (265)
T 3rsi_A 159 PYTKAMEMILTGEPLTAFEAYHFGLVGHVVPAGTALDKARSLADRIVRNGPLAVR------------------------- 213 (265)
T ss_dssp CHHHHHHHHHHCCCEEHHHHHHTTSCSEEESTTCHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred CHHHHHHHHHcCCCCCHHHHHHCCCccEecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 9999999999999999999999999999999999999999999999999875443
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|...
T Consensus 214 -----------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3rsi_A 214 -----------NAKEAIVRSGWLAEEDARAIEARLTRPVITSADAREGLAAFKEKREARFT 263 (265)
T ss_dssp -----------HHHHHHHHHTTCCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTSCCCCC
T ss_pred -----------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888899999999999999999999999999999999988753
No 31
>2ppy_A Enoyl-COA hydratase; beta-oxidation, fatty acid metabol lyase, structural genomics, NPPSFA; 2.16A {Geobacillus kaustophilus}
Probab=100.00 E-value=9.7e-50 Score=412.88 Aligned_cols=252 Identities=25% Similarity=0.387 Sum_probs=227.0
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCCccCCCCchhhhhccCCCcccc
Q 004918 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSL 81 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (724)
++.+.++. +++|++||||||+.|++|.+|+++|.++++.++.|+++|+||||| .|++||+|+|++++.. . ..+...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~-~-~~~~~~ 84 (265)
T 2ppy_A 8 KQYLTVFK-EDGIAEIHLHINKSNSYDLEFYKEFNAAIDDIRFDPDIKVVIVMSDVPKFFSAGADINFLRS-A-DPRFKT 84 (265)
T ss_dssp CSSEEEEE-ETTEEEEEECSSTTCCBCHHHHHHHHHHHHHHHTCTTCCEEEEEECSTTEEECCBCHHHHTT-S-CHHHHH
T ss_pred CCeEEEEe-eCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCeeeeCcCHHHHhc-c-chhHHH
Confidence 45788888 789999999999779999999999999999999999999999999 9999999999998864 1 111111
Q ss_pred cchhH-HHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCc-eeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 82 MPDVS-VELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKT-QLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 82 ~~~~~-~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a-~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
+.... ++++ .+|.++||||||+|||+|+|||++|+++||+|||++++ +|++||+++|++|++|++++|++++|..+|
T Consensus 85 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~ag~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a 163 (265)
T 2ppy_A 85 QFCLFCNETL-DKIARSPQVYIACLEGHTVGGGLEMALACDLRFMGDEAGKIGLPEVSLGVLAGTGGTQRLARLIGYSRA 163 (265)
T ss_dssp HHHHHHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHTSSEEEEETTCCCEECCGGGGTCCCTTTHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCEEeeHHHHHHHhCCEEEEeCCCCEEECcccccCCCCCchHHHHHHHHhCHHHH
Confidence 22233 4556 67999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|+|++++.+++.++++++++.++.+++
T Consensus 164 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 213 (265)
T 2ppy_A 164 LDMNITGETITPQEALEIGLVNRVFPQAETRERTREYARKLANSATYAVS------------------------------ 213 (265)
T ss_dssp HHHHHHCCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCccCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875432
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|..
T Consensus 214 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 262 (265)
T 2ppy_A 214 ------NIKLAIMNGKEMPLNVAIRYEGELQNLLFRSEDAKEGLSAFLEKRQPNW 262 (265)
T ss_dssp ------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 4577888888889999999999999999999999999999999988775
No 32
>3qxz_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.35A {Mycobacterium abscessus} SCOP: c.14.1.0
Probab=100.00 E-value=1.4e-50 Score=418.59 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=226.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccc
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (724)
++.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..........
T Consensus 6 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~- 83 (265)
T 3qxz_A 6 VTELHEEI-RDGVAVLTLHGPSTRNSFTVELGRQLGAAYQRLDDDPAVRVIVLTGAPPAFCSGAQISAAAETFAAPRNP- 83 (265)
T ss_dssp CCEEEEEE-ETTEEEEEEECGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBCSTTCTTCCCCCCSS-
T ss_pred cceEEEEE-ECCEEEEEEcCCccCCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCccccCcChHHHhhccchhHHH-
Confidence 46788998 7899999999996 69999999999999999999999999999999999999999999987643222111
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
.... +.++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 84 ~~~~-~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A~~ 161 (265)
T 3qxz_A 84 DFSA-SPVQ-PAAFELRTPVIAAVNGHAIGIGMTLALHADIRILAEEGRYAIPQVRFGVAPDALAHWTLPRLVGTAVAAE 161 (265)
T ss_dssp CCCS-CCSS-SCGGGSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCCEECCGGGGTSCCCTTHHHHTHHHHHHHHHHH
T ss_pred HHHH-HHHH-HHHHhCCCCEEEEECCEEehHhHHHHHHCCEEEEcCCCEEECcccccCcCCCccHHHHHHHHhCHHHHHH
Confidence 1112 3444 5689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHcc-CchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (724)
|++||++++|+||+++||||+|||++++.+++.++|+++++. |+.+++
T Consensus 162 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~p~a~~------------------------------- 210 (265)
T 3qxz_A 162 LLLTGASFSAQRAVETGLANRCLPAGKVLGAALRMAHDIATNVAPESAA------------------------------- 210 (265)
T ss_dssp HHHHCCCBCHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHHHSCHHHHH-------------------------------
T ss_pred HHHcCCCcCHHHHHHCCCccEeeCHHHHHHHHHHHHHHHHccCCHHHHH-------------------------------
Confidence 999999999999999999999999999999999999999998 875443
Q ss_pred ChhHHHHHHHHHHhhcCCHHHH--HHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 241 MPQHQACLDVIEEGIVHGGYSG--VLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~--l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.....+++++ ++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 211 -----~~K~~l~~~~~~~l~~~~~l~~e~~~~~~~~~s~d~~egi~Af~ekr~P~f~ 262 (265)
T 3qxz_A 211 -----LTKRLLWDAQMTGMSAAEVAARETADHLRLMGSQDAAEGPRAFIDGRPPRWA 262 (265)
T ss_dssp -----HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTSTHHHHHHHHHHHTSCCCCC
T ss_pred -----HHHHHHHHhhcCCHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHcCCCCCCC
Confidence 45677777777788888 999999999999999999999999999998764
No 33
>2ej5_A Enoyl-COA hydratase subunit II; structural genomics, GK2038, NPPSFA, national project on prote structural and functional analyses; 2.00A {Geobacillus kaustophilus}
Probab=100.00 E-value=7.2e-50 Score=411.95 Aligned_cols=250 Identities=26% Similarity=0.379 Sum_probs=221.3
Q ss_pred CcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccccc
Q 004918 4 PRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (724)
+.+.++. +++|++|||||| +.|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... .+
T Consensus 3 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~---~~ 78 (257)
T 2ej5_A 3 ETIRYEV-KGQVAWLTLNRPDQLNAFTEQMNAEVTKALKQAGADPNVRCVVITGAGRAFCAGEDLSGVTEEMDHG---DV 78 (257)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCC-------CHH---HH
T ss_pred CceEEEe-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCCCCccCCcCHHHHhhccchh---HH
Confidence 5788998 789999999999 589999999999999999999999999999999999999999999876422111 11
Q ss_pred ch-hHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 83 PD-VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 83 ~~-~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
.. ...+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 79 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~ 157 (257)
T 2ej5_A 79 LRSRYAPMM-KALHHLEKPVVAAVNGAAAGAGMSLALACDFRLLSEKASFAPAFIHVGLVPDAGHLYYLPRLVGRAKALE 157 (257)
T ss_dssp HHHTHHHHH-HHHHHCCSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECccccchhHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHHHHH
Confidence 11 234555 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|++||++++|+||+++||||+|+|++++.+++.+++++++..++.+++
T Consensus 158 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 205 (257)
T 2ej5_A 158 LAVLGEKVTAEEAAALGLATKVIPLSDWEEEVKQFAERLSAMPTKAIG-------------------------------- 205 (257)
T ss_dssp HHHHCCCEEHHHHHHHTCCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHhCCccCHHHHHHcCCcceecChhHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875432
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|.+
T Consensus 206 ----~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 254 (257)
T 2ej5_A 206 ----LIKRLLRESEETTFDRYLEREAECQRIAGLTSDHREGVKAFFEKRKPLF 254 (257)
T ss_dssp ----HHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSHHHHHHHHHHTTTCCCCC
T ss_pred ----HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCChHHHHHHHHHhcCCCCCC
Confidence 4567788888889999999999999999999999999999999988765
No 34
>3gkb_A Putative enoyl-COA hydratase; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Streptomyces avermitilis}
Probab=100.00 E-value=4.1e-50 Score=418.68 Aligned_cols=248 Identities=25% Similarity=0.334 Sum_probs=220.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccC----CC
Q 004918 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHG----AG 77 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~----~~ 77 (724)
++.|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++..... ..
T Consensus 8 ~~~i~~~~-~~~va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~~~~~~~ 86 (287)
T 3gkb_A 8 YSTLRVSS-EHGVARIILDNPPVNVIGATMMRELRTVLTTLADDSSVRVIVFSSADPEFFLAHVDMRIGEKMDALQELAA 86 (287)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSEEECCBCTTGGGSHHHHHHHHH
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHcCCCeeEEEEecCCCCceeCCcCHHHHhhccccchhhH
Confidence 67899999 79999999999999999999999999999999999999999999998 78999999998864210 00
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeC-CceeeCcccccCccCCcchhhhhcccccH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~-~a~f~~pe~~~G~~P~~g~~~~l~r~~G~ 156 (724)
..........+++ ..|.++||||||+|||+|+|||++|+++||+|||++ +++|++||+++|++|++|++++|+|++|.
T Consensus 87 ~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 165 (287)
T 3gkb_A 87 SAPADVNVFQAVG-ELIRHQPQVTIVKLAGKARGGGAEFVAAADMAFAAAETAGLGQIEALMGIIPGGGGTQYLRGRVGR 165 (287)
T ss_dssp TSCTTCCTTHHHH-HHHHHCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECGGGGGTSCCCSSHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCCchHHHHHHHHhCH
Confidence 1112223344566 679999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004918 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (724)
Q Consensus 157 ~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (724)
.+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 166 ~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~--------------------------- 218 (287)
T 3gkb_A 166 NRALEVVLTADLFDAETAASYGWINRALPADELDEYVDRVARNIAALPDGVIE--------------------------- 218 (287)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCTTHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCCcEEeChhHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999876543
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004918 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (724)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~ 291 (724)
.+|++++.. ...++++.|...+..++.|+|++|++++|++||+
T Consensus 219 ---------~~K~~l~~~---~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekr~ 261 (287)
T 3gkb_A 219 ---------AAKRSLPAD---DLKEGLLGENDAWAATFSLPAAQQLISGGLKDGA 261 (287)
T ss_dssp ---------HHHHHSCCC---CCHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTTT
T ss_pred ---------HHHHHHHcc---CHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 344555542 3468899999999999999999999999999987
No 35
>2pbp_A Enoyl-COA hydratase subunit I; B-oxidation, structural genomics, NPPSFA, nationa on protein structural and functional analyses; 1.80A {Geobacillus kaustophilus} PDB: 2qq3_A
Probab=100.00 E-value=1.1e-49 Score=410.87 Aligned_cols=253 Identities=30% Similarity=0.466 Sum_probs=225.3
Q ss_pred CC-CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc
Q 004918 1 MA-APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (724)
Q Consensus 1 M~-~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (724)
|+ +..+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++......
T Consensus 1 m~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~-- 77 (258)
T 2pbp_A 1 MSEFVSIAARQ-EGAVGIIELARPDVLNALSRQMVAEIVAAVEAFDRNEKVRVIVLTGRGRAFAAGADIQEMAKDDPI-- 77 (258)
T ss_dssp ---CCSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCCCHHHHHTCCHH--
T ss_pred CCCcceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCccCCcCHHHHhcccch--
Confidence 55 45788888 7899999999995 7999999999999999999999999999999999999999999987642210
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
...+.... +.+ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 78 ~~~~~~~~-~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~ 155 (258)
T 2pbp_A 78 RLEWLNQF-ADW-DRLSIVKTPMIAAVNGLALGGGFELALSCDLIVASSAAEFGFPEVNLGVMPGAGGTQRLTKLIGPKR 155 (258)
T ss_dssp HHHHHCTT-HHH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHHCHHH
T ss_pred hHHHHHHH-HHH-HHHHhCCCCEEEEEcCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCcccHHHHHHHHhCHHH
Confidence 01111112 445 5689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (724)
|++|++||++++|+||+++||||+|+|++++.+++.+++++++..++.+++
T Consensus 156 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 206 (258)
T 2pbp_A 156 ALEWLWTGARMSAKEAEQLGIVNRVVSPELLMEETMRLAGRLAEQPPLALR----------------------------- 206 (258)
T ss_dssp HHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCccCHHHHHHcCCcceeeChHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875433
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+.
T Consensus 207 -------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~~ 255 (258)
T 2pbp_A 207 -------LIKEAVQKAVDYPLYEGMQFERKNFYLLFASEDQKEGMAAFLEKRKPRF 255 (258)
T ss_dssp -------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTSCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCCC
Confidence 4577888888889999999999999999999999999999999988764
No 36
>4hdt_A 3-hydroxyisobutyryl-COA hydrolase; ssgcid, carnitinyl-COA dehydratase, enoyl-COA hydratase/ISOM mycobacterium thermoresistibIle; 1.60A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1.3e-49 Score=426.10 Aligned_cols=291 Identities=20% Similarity=0.272 Sum_probs=229.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCCC--c
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG--D 78 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~--~ 78 (724)
+++|.+++ +++|++||||||+ +|+||.+|+.+|.++++.+++|+++|+|||||.| ++||+|+|++++....... .
T Consensus 8 ~e~vl~e~-~~~Va~itLnrP~~~NAl~~~m~~~l~~al~~~~~d~~vr~vvltg~G~~~FcaG~Dl~~~~~~~~~~~~~ 86 (353)
T 4hdt_A 8 NEDVLVNV-EGGVGLLTLNRPKAINSLTHGMVTTMAERLAAWENDDSVRAVLLTGAGERGLCAGGDVVAIYHSAKADGAE 86 (353)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESSSSBSBCCBCHHHHHHHHHTTSHH
T ss_pred CCcEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEeCCCCCEecCcCHHHHhhccchhhHH
Confidence 57899999 8999999999996 7999999999999999999999999999999998 6999999999986532211 1
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
...+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++| .+
T Consensus 87 ~~~~~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~iGl~p~~g~~~~l~rl~g-~~ 164 (353)
T 4hdt_A 87 ARRFWFDEYRLN-AHIGRYPKPYVSIMDGIVMGGGVGVGAHGNVRVVTDTTKMAMPEVGIGFIPDVGGTYLLSRAPG-KL 164 (353)
T ss_dssp HHHHHHHHHHHH-HHHHHCSSCEEEEECBEEETHHHHHHTTSSEEEECTTCEEECCGGGGTCCCCTTHHHHHHTSST-TH
T ss_pred HHHHHHHHHHHH-HHHHHCCCCEEEEeECceeecCccccCCcCeeccchhccccCcccccccCCCccceehhhhhhh-HH
Confidence 222233344555 6699999999999999999999999999999999999999999999999999999999999999 69
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhh---------hh----hhccCCCCCcHHHHH
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWI---------RS----LHRTDKLGSLSEARE 225 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~---------~~----~~~~~~~~~~~~~~~ 225 (724)
|++|++||++|+|+||+++||||+|||+++|++.+.+++.+......... .. +.+.-...++.....
T Consensus 165 a~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~la~~~~~~~l~~~~~~~~~~~l~~~~~~i~~~f~~~~~~~i~~ 244 (353)
T 4hdt_A 165 GLHAALTGAPFSGADAIVMGFADHYVPHDKIDEFTRAVIADGVDAALAAHAQEPPASPLAEQRSWIDECYTGDTVADIIA 244 (353)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHHHCHHHHHHHHCBCCCCCHHHHTHHHHHHHTTCSSHHHHHH
T ss_pred HHHHHhcCCCCCHHHHHHcCCCcEEeCHHHHHHHHHHHHHhchhHHHHHhcccCCccchHHHHHHHHHHhCCCCHHHHHH
Confidence 99999999999999999999999999999999999998876432110000 00 000000011111111
Q ss_pred HHH-----HHHHHHHHhCCCC-hhHHHHHHHHHHhhcC-CHHHHHHHHHHHHHHHhCCHHHHHHHHHHH--HhhhhcCCC
Q 004918 226 VLK-----LARLQAKKTAPNM-PQHQACLDVIEEGIVH-GGYSGVLKEAKVFKELVMLDTSRGLVHVFF--AQRATSKVP 296 (724)
Q Consensus 226 ~~~-----~~~~~~~~~~~~~-~a~~~~~~~~~~~~~~-~~~~~l~~E~~~~~~~~~s~~~~~~~~af~--~~r~~~~~~ 296 (724)
.+. .+....++...+- .+...+|+.++.+... +++++++.|.+.+..++.|+|++|++++|+ +||+|++++
T Consensus 245 ~L~~~~~~~a~~~a~~la~~sP~a~~~~k~~l~~~~~~~sl~e~l~~E~~~~~~~~~s~D~~EGvrAfl~dekR~P~w~p 324 (353)
T 4hdt_A 245 ALRAHDAPAAGEAADLIATRSPIALSVTLESVRRAAKLQSLEDTLRQEYRVSCASLKSHDLVEGIRAQLVDKDRNPKWRP 324 (353)
T ss_dssp HHHHHCSHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC----CCCCSS
T ss_pred HHHhcccHHHHHHHHHHHhcCcHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCchHHHHHhhhhhCcCCCCCCCC
Confidence 111 1112223333333 4677789999988875 799999999999999999999999999999 999999875
No 37
>3qre_A Enoyl-COA hydratase, ECHA12_1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.40A {Mycobacterium marinum M}
Probab=100.00 E-value=1.1e-50 Score=425.29 Aligned_cols=256 Identities=25% Similarity=0.333 Sum_probs=183.0
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhh---ccCCC
Q 004918 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQK---VHGAG 77 (724)
Q Consensus 3 ~~~v~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~---~~~~~ 77 (724)
++.|.++. ++ +|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.. .....
T Consensus 28 ~~~v~~~~-~~~~Va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~~~~~~~~~~ 106 (298)
T 3qre_A 28 QDAVLYEA-TPGGVAIITFNRADRLNAWGPDLAAGFYAAIDRAEADPGIRVIVLTGRGRGFCAGAYLGSADAAAGYDKTM 106 (298)
T ss_dssp CCSEEEEE-CTTSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSEECC---------------
T ss_pred CCeEEEEE-eCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcCHHHHhhcccccccc
Confidence 46799999 77 99999999995 799999999999999999999999999999999999999999999864 11110
Q ss_pred ----cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccc
Q 004918 78 ----DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL 153 (724)
Q Consensus 78 ----~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~ 153 (724)
....+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|+
T Consensus 107 ~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~ 185 (298)
T 3qre_A 107 AKAKDANLADLVGERPP-HFVTMLRKPVIAAINGPCVGIGLTQALMCDVRFAAAGAKFAAVFARRGLIAEFGISWILPRL 185 (298)
T ss_dssp --------------CCT-TGGGGSSSCEEEEECSCEETHHHHHHHHSSEEEEETTCEEECCCCHHHHHCTTSHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHH-HHHHhCCCCEEEEECCceeecchHHHhhCCEEEEcCCCEEECcccccCCCcchhHHHHHHHh
Confidence 1111111122334 56889999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHcc-CchhhhhhhccCCCCCcHHHHHHHHHHHH
Q 004918 154 VGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR-RKPWIRSLHRTDKLGSLSEAREVLKLARL 232 (724)
Q Consensus 154 ~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (724)
+|..+|++|++||++++|+||+++||||+|||++++.+++.++|++|+.. |+.+++
T Consensus 186 vG~~~A~ellltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~p~a~~----------------------- 242 (298)
T 3qre_A 186 TSWAVALDLLLSGRTFLAEEAAQLGLVKEVVTPEQLMPRALEYAEDIARYCSPSSMA----------------------- 242 (298)
T ss_dssp SCHHHHHHHHHHCCEEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHHHSCHHHHH-----------------------
T ss_pred cCHHHHHHHHHcCCCCCHHHHHHcCCCeEecCHHHHHHHHHHHHHHHHccCCHHHHH-----------------------
Confidence 99999999999999999999999999999999999999999999999998 765433
Q ss_pred HHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 233 QAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 233 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|+..+
T Consensus 243 -------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~Egv~AF~ekR~P~f~~ 293 (298)
T 3qre_A 243 -------------VIKRQVYGDATRDVVEATSHAEVLLREAMPRPDVIEGIVSFLEKRPPQFPS 293 (298)
T ss_dssp -------------HHHHHHHGGGGC---------------------------------------
T ss_pred -------------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCCC
Confidence 567888888888999999999999999999999999999999999998654
No 38
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=100.00 E-value=1.3e-49 Score=411.11 Aligned_cols=253 Identities=21% Similarity=0.277 Sum_probs=226.3
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CC-CCccCCCCchhhhhccCCC
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NG-GRFSGGFDINVFQKVHGAG 77 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g-~g-~~F~aG~Dl~~~~~~~~~~ 77 (724)
|+|+.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+ +|+||||| .| ++||+|+|++++......
T Consensus 1 m~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~-vr~vVltg~~g~~~F~aG~Dl~~~~~~~~~- 77 (261)
T 1ef8_A 1 MSYQYVNVVT-INKVAVIEFNYGRKLNALSKVFIDDLMQALSDLNRPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRD- 77 (261)
T ss_dssp CCCSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHTCSTT-CCEEEEECCTTCSEEECCSCSTTC-----C-
T ss_pred CCcceEEEEE-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCC-ceEEEEECCCCCCeeecCcChHhhhccCch-
Confidence 8899999999 7899999999996 89999999999999999999999 99999999 98 899999999987643211
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
.. ......++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 78 ~~-~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~ 155 (261)
T 1ef8_A 78 PL-SYDDPLRQIT-RMIQKFPKPIISMVEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFH 155 (261)
T ss_dssp TT-CTTSHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCHHHHHTTSSSSCHH
T ss_pred hH-HHHHHHHHHH-HHHHhCCCCEEEEECCEEEeHhHHHHHhCCEEEecCCCEEeCchhccCCCCCccHHHHHHHHhCHH
Confidence 11 1222345666 679999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|+|++++.+++.+++++++..++.+++
T Consensus 156 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 207 (261)
T 1ef8_A 156 IVKELIFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIA---------------------------- 207 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHTTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCccCHHHHHHCCCcccccCHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875432
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH--HHhCCHHHHHHHHHHHHhhhhcC
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFK--ELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~--~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+. .++.|+|++|++++|++||+|..
T Consensus 208 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~d~~eg~~af~ekr~p~~ 258 (261)
T 1ef8_A 208 --------VIKEELRVLGEAHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNF 258 (261)
T ss_dssp --------HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred --------HHHHHHHHhhcCCHHHHHHHHHHHhhHHHhhcCHHHHHHHHHHHccCCCCC
Confidence 45677777777788999999999999 99999999999999999988765
No 39
>3trr_A Probable enoyl-COA hydratase/isomerase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.09A {Mycobacterium abscessus}
Probab=100.00 E-value=1.2e-49 Score=409.37 Aligned_cols=249 Identities=28% Similarity=0.433 Sum_probs=224.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (724)
|+ +.|.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++.........
T Consensus 5 m~-~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 82 (256)
T 3trr_A 5 MA-DEVLIEQ-RDRVLLITINRPDARNAVNRAVSQGLAAAADQLDSSADLSVAIITGAGGNFCAGMDLKAFVSGEAVLSE 82 (256)
T ss_dssp CC-CSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEEGGGCCCCCBCHHHHHHTCCCEET
T ss_pred CC-CceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceecCcCHHHhccccchhhh
Confidence 44 4688999 7999999999996 7999999999999999999999999999999999999999999998753221111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
.. . . + ..+ ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 83 ~~----~-~-~-~~~-~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a 154 (256)
T 3trr_A 83 RG----L-G-F-TNV-PPRKPIIAAVEGFALAGGTELVLSCDLVVAGRSAKFGIPEVKRGLVAGAGGLLRLPNRIPYQVA 154 (256)
T ss_dssp TE----E-T-T-SSS-CCSSCEEEEECSBCCTHHHHHHHTSSEEEEETTCEECCCGGGGTCCCCSSHHHHHHHHSCHHHH
T ss_pred hh----h-h-H-HHh-cCCCCEEEEECCeeeechhHHHHhCCEEEECCCCEEEehhhccCCCCCccHHHHHHHHhCHHHH
Confidence 11 1 1 2 224 8999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 155 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 204 (256)
T 3trr_A 155 MELALTGESFTAEDAAKYGFINRLVDDGQALDTALELAAKITANGPLAVA------------------------------ 204 (256)
T ss_dssp HHHHHHCCCEEHHHHGGGTCCSEEECTTCHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHhCCCcCHHHHHHCCCeeEecChHHHHHHHHHHHHHHHcCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 205 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 254 (256)
T 3trr_A 205 ------ATKRIIIESASWAPEEAFAKQGEILMPIFVSEDAKEGAKAFAEKRAPVWQ 254 (256)
T ss_dssp ------HHHHHHHHGGGSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCCC
Confidence 46788888888999999999999999999999999999999999988753
No 40
>3tlf_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, otholog; 2.15A {Mycobacterium avium subsp} SCOP: c.14.1.0
Probab=100.00 E-value=7.6e-50 Score=415.72 Aligned_cols=253 Identities=21% Similarity=0.292 Sum_probs=220.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccC-----C-
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-----A- 76 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~-----~- 76 (724)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... .
T Consensus 11 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 89 (274)
T 3tlf_A 11 DTIKYEV-DGHTATITLNRPDALNALSPHMITELRAAYHEAENDDRVWLLVVTGTGRAFCSGADVKEIPEDGKVIYERPY 89 (274)
T ss_dssp SSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTEEECCBC--------------CT
T ss_pred CceEEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEeCCCCCcccCcCHHHHhhccccccccch
Confidence 4789999 7899999999996 799999999999999999999999999999999999999999999865332 0
Q ss_pred CcccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccH
Q 004918 77 GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (724)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~ 156 (724)
..........+.++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|.
T Consensus 90 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p-~g~~~~L~r~vG~ 167 (274)
T 3tlf_A 90 LSTYDQWEAPQEGT-PPFRTMAKPVLTAVNGICCGAGMDWVTTTDIVIASEQATFFDPHVSIGLVA-GRELVRVSRVLPR 167 (274)
T ss_dssp TCSGGGGSCCCTTC-CCTTSCCSCEEEEECSEEEGGGHHHHHHSSEEEEETTCEEECCGGGGTCCC-CHHHHHHTTTSCH
T ss_pred hhHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCccc-chHHHHHHHHhCH
Confidence 11111111222344 568899999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHcCC--CCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHH
Q 004918 157 SKAIEMMLLSK--SITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQA 234 (724)
Q Consensus 157 ~~a~~l~ltg~--~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (724)
.+|++|++||+ +++|+||+++||||+|+|++++.+++.++|++|++.|+.+++
T Consensus 168 ~~A~~l~ltg~~~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------- 222 (274)
T 3tlf_A 168 SIALRMALMGKHERMSAQRAYELGLISEIVEHDRLLERAHEIADIVNSNAPLAVR------------------------- 222 (274)
T ss_dssp HHHHHHHHHGGGCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------
T ss_pred HHHHHHHHcCCCCccCHHHHHHCCCCCeecCHHHHHHHHHHHHHHHHhCCHHHHH-------------------------
Confidence 99999999999 999999999999999999999999999999999999875443
Q ss_pred HHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 235 KKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 235 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 223 -----------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 272 (274)
T 3tlf_A 223 -----------GTRLAILKGLNVPLHEAEILAETFRERVLRTEDAAEGPRAFVEKRQPNWQ 272 (274)
T ss_dssp -----------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCC
T ss_pred -----------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 56778888888899999999999999999999999999999999988753
No 41
>2vx2_A Enoyl-COA hydratase domain-containing protein 3; isomerase, fatty acid metabolism, transit peptide, lipid Met crontonase, mitochondrion, CAsp; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-49 Score=414.04 Aligned_cols=252 Identities=21% Similarity=0.340 Sum_probs=224.1
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccccc
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (724)
..+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|+.||+|+|++++...........+
T Consensus 33 ~~v~~~~-~~~V~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~~ 111 (287)
T 2vx2_A 33 RPTSARQ-LDGIRNIVLSNPKKRNTLSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEV 111 (287)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHTTTTCTTCCEEEEEESSSEEECCSCCC-CCGGGCHHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhcccchhHHHHH
Confidence 4688888 7899999999996 7999999999999999999999999999999999999999999987543211111112
Q ss_pred chhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHH
Q 004918 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (724)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l 162 (724)
.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|+++ |++++|..+|++|
T Consensus 112 ~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~-L~r~vG~~~A~~l 189 (287)
T 2vx2_A 112 FQTCSKVM-MHIRNHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVA-LARAVPRKVALEM 189 (287)
T ss_dssp HHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCHHHHHH-HHTTSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEcCCCEEECchhhhCCCCchHHHH-HHHHhhHHHHHHH
Confidence 22344555 679999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred HHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (724)
++||++++|+||+++||||+|||++++.+++.++|++|++.++.+++
T Consensus 190 lltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------------- 236 (287)
T 2vx2_A 190 LFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVS--------------------------------- 236 (287)
T ss_dssp HHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHhCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875432
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+.
T Consensus 237 ---~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~f 285 (287)
T 2vx2_A 237 ---LGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVW 285 (287)
T ss_dssp ---HHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ---HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCC
Confidence 4567788777888999999999999999999999999999999988764
No 42
>3r9q_A Enoyl-COA hydratase/isomerase; ssgcid, lyase,isomerase; 2.10A {Mycobacterium abscessus} PDB: 3qka_A
Probab=100.00 E-value=7.9e-50 Score=411.71 Aligned_cols=247 Identities=27% Similarity=0.330 Sum_probs=206.2
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccc
Q 004918 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (724)
Q Consensus 5 ~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (724)
.|.++. +++|++||||||+ .|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++....... ...
T Consensus 12 ~v~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~-- 87 (262)
T 3r9q_A 12 AVRVEK-AGPVTTVILNRPHARNAVDGPTAAALLAAFTEFDADPEASVAVLWGDNGTFCAGADLKAMGTDRGNE-LHP-- 87 (262)
T ss_dssp SEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCTTTTTSTTSCC-CCT--
T ss_pred EEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcCHHHHhccChhh-HHH--
Confidence 588998 7899999999995 79999999999999999999999999999999999999999999986543211 110
Q ss_pred hhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHH
Q 004918 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (724)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ 163 (724)
.....++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++|+
T Consensus 88 ~~~~~~~-~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~l~ 166 (262)
T 3r9q_A 88 HGPGPMG-PSRLRLSKPVIAAISGHAVAGGIELALWCDLRVVEEDAVLGVFCRRWGVPLIDGGTIRLPRLIGHSRAMDLI 166 (262)
T ss_dssp TSSCTTS-STTCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECTHHHHTCCCCSSHHHHHHHHHCHHHHHHHH
T ss_pred hhhhHHH-HHHHhCCCCEEEEECCeeehhhhHHHHhCCEEEEeCCCEEecchhccCCCCCccHHHHHHHHhCHHHHHHHH
Confidence 0011122 346789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChh
Q 004918 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (724)
Q Consensus 164 ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (724)
+||++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 167 ltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 212 (262)
T 3r9q_A 167 LTGRPVHANEALDIGLVNRVVARGQAREAAETLAAEIAAFPQQCVR---------------------------------- 212 (262)
T ss_dssp HHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH----------------------------------
T ss_pred HcCCcCCHHHHHHcCCccEecChhHHHHHHHHHHHHHHhCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999999875443
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.....+++++++.|.+ +..++.| |++|++++|++||+|.+
T Consensus 213 --~~K~~~~~~~~~~l~~~l~~e~~-~~~~~~s-d~~Eg~~AF~ekr~p~~ 259 (262)
T 3r9q_A 213 --ADRDSAIAQWGMAEEAALDNEFG-SIERVAT-EALEGAGRFAAGEGRHG 259 (262)
T ss_dssp --HHHHHHHHTTTSCHHHHHHHHHT-HHHHHHC------------------
T ss_pred --HHHHHHHhhhcCCHHHHHHHHHH-HHHHhcc-HHHHHHHHHHcCCCCCC
Confidence 45778888888999999999999 9999999 99999999999998875
No 43
>1dci_A Dienoyl-COA isomerase; lyase; 1.50A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2vre_A
Probab=100.00 E-value=5.2e-49 Score=409.90 Aligned_cols=256 Identities=21% Similarity=0.316 Sum_probs=226.5
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCC---
Q 004918 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (724)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (724)
+|++|.++.++++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.......
T Consensus 1 ~~~~v~~~~~~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 80 (275)
T 1dci_A 1 AYESIQVTSAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGD 80 (275)
T ss_dssp CCSSEEEEEEETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTCCEEEEEESTTCSBCCBCHHHHHHHHTSCCCS
T ss_pred CCceEEEEEcCCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhcccccccc
Confidence 36788898755789999999995 89999999999999999999999999999999999999999999886531110
Q ss_pred cc-------cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhh
Q 004918 78 DV-------SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRL 150 (724)
Q Consensus 78 ~~-------~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l 150 (724)
+. ..+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l 159 (275)
T 1dci_A 81 DVARIAWYLRDLISRYQKTF-TVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRL 159 (275)
T ss_dssp SHHHHHHHHHHHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTSCCCSSHHHHG
T ss_pred hhhhhhHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHH
Confidence 00 01112233455 66899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccH-HHHHHHHHcCCCCCHHHHHHCCCcceecCc-chHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHH
Q 004918 151 PRLVGL-SKAIEMMLLSKSITSEEGWKLGLIDAVVTS-EELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLK 228 (724)
Q Consensus 151 ~r~~G~-~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~-~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (724)
++++|. .+|++|++||++++|+||+++||||+|||+ +++.+++.++|++|++.++.+++
T Consensus 160 ~r~vG~~~~A~~l~ltg~~~~a~eA~~~GLv~~vv~~~~~l~~~a~~~a~~la~~~p~a~~------------------- 220 (275)
T 1dci_A 160 PKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQ------------------- 220 (275)
T ss_dssp GGTCSCHHHHHHHHHHCCEEEHHHHHHHTSSSEEESSHHHHHHHHHHHHHHHHHSCHHHHH-------------------
T ss_pred HHHhCcHHHHHHHHHcCCCCCHHHHHHcCCcceecCChHHHHHHHHHHHHHHHhCCHHHHH-------------------
Confidence 999999 999999999999999999999999999999 99999999999999999875443
Q ss_pred HHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh---hhhcC
Q 004918 229 LARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ---RATSK 294 (724)
Q Consensus 229 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~---r~~~~ 294 (724)
.+|++++.+...+++++++.|...+..++.|+|++|++++|++| |+|+.
T Consensus 221 -----------------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ek~~~r~p~f 272 (275)
T 1dci_A 221 -----------------GSKINLIYSRDHSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKKDSKSITF 272 (275)
T ss_dssp -----------------HHHHHHHHHHHSCHHHHHHHHHHHHHHHTSSHHHHHHHHHHHTTCCGGGCCC
T ss_pred -----------------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 45677888888889999999999999999999999999999999 77764
No 44
>1wz8_A Enoyl-COA hydratase; lyase, crotonase, hexamer, structural genomics, riken S genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.5e-49 Score=410.91 Aligned_cols=253 Identities=23% Similarity=0.241 Sum_probs=223.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhc-c-CCCccc
Q 004918 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKV-H-GAGDVS 80 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~-~-~~~~~~ 80 (724)
++.+.++.++++|++||||||+.|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++ +... . ......
T Consensus 9 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~-~~~~~~~~~~~~~ 87 (264)
T 1wz8_A 9 YPGLAFAWPRPGVLEITFRGEKLNAMPPALHRGLARVWRDLEAVEGVRAVLLRGEGGVFSAGGSFG-LIEEMRASHEALL 87 (264)
T ss_dssp CTTEEEEEEETTEEEEEECCSGGGCBCHHHHHHHHHHHHHHTTCTTCSEEEEEEGGGCCBCCBCHH-HHHHHHHCHHHHH
T ss_pred CCeEEEEEccCCEEEEEeCCCCcCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCCCcccCccc-cccccccchHHHH
Confidence 456888773578999999999999999999999999999999999999999999999999999999 7542 1 101011
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHH
Q 004918 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (724)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~ 160 (724)
.+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 88 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~a~ 166 (264)
T 1wz8_A 88 RVFWEARDLV-LGPLNFPRPVVAAVEKVAVGAGLALALAADIAVVGKGTRLLDGHLRLGVAAGDHAVLLWPLLVGMAKAK 166 (264)
T ss_dssp HHHHHHHHHH-HHHHHSSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTSCCTTTHHHHTHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHcCCCCEEEEECCeeechhHHHHHhCCEEEecCCCEEeCchhhcCcCCCccHHHHHHHHhCHHHHH
Confidence 1223344556 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004918 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (724)
Q Consensus 161 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (724)
+|++||++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 167 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 215 (264)
T 1wz8_A 167 YHLLLNEPLTGEEAERLGLVALAVEDEKVYEKALEVAERLAQGPKEALH------------------------------- 215 (264)
T ss_dssp HHHHHTCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCceeecChhHHHHHHHHHHHHHHhCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998865432
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+... ++++++.|.+.+..++.|+|++|++++|++||+|..
T Consensus 216 -----~~K~~l~~~~~~-~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 263 (264)
T 1wz8_A 216 -----HTKHALNHWYRS-FLPHFELSLALEFLGFSGKELEEGLKALKEKRPPEF 263 (264)
T ss_dssp -----HHHHHHHHHHHT-THHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred -----HHHHHHHHHHHH-HHHHHHHHHHHHHHHhcChHHHHHHHHHHccCCCCC
Confidence 446677777777 899999999999999999999999999999988763
No 45
>3r9t_A ECHA1_1; ssgcid, seattle structural genomics center for infectious DI enoyl-COA hydratase, lyase; 1.75A {Mycobacterium avium subsp} SCOP: c.14.1.0 PDB: 3r9s_A 3r0o_A
Probab=100.00 E-value=1.3e-49 Score=411.60 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=223.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCCCccc
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++.........
T Consensus 8 ~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~~~~~- 85 (267)
T 3r9t_A 8 APGALAER-RGNVMVITINRPEARNAINAAVSIGVGDALEEAQHDPEVRAVVLTGAGDKSFCAGADLKAIARRENLYHP- 85 (267)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCHHHHHTTCCCSCT-
T ss_pred CCcEEEEE-ECCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceeCCcChHHHhcccchhhH-
Confidence 46799999 7899999999995 7999999999999999999999999999999999 599999999998754322211
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHH
Q 004918 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (724)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~ 160 (724)
.........+ . ..++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|+
T Consensus 86 ~~~~~~~~~~-~-~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~ 163 (267)
T 3r9t_A 86 DHPEWGFAGY-V-RHFIDKPTIAAVNGTALGGGTELALASDLVVADERAQFGLPEVKRGLIAAAGGVFRIAEQLPRKVAM 163 (267)
T ss_dssp TCGGGCGGGT-T-TCCCSSCEEEEECSEECTHHHHHHHHSSEEEEETTCEECCGGGGTTCCCTTTHHHHHHHHSCHHHHH
T ss_pred HHHhHHHHHH-H-HHhCCCCEEEEECCEEEhHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHcCHHHHH
Confidence 1011100112 1 3489999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004918 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (724)
Q Consensus 161 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (724)
+|++||++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 164 ~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 212 (267)
T 3r9t_A 164 RLLLTGEPLSAAAARDWGLINEVVEAGSVLDAALALASAITVNAPLSVQ------------------------------- 212 (267)
T ss_dssp HHHHHCCCEEHHHHHHHTSSSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEcChhHHHHHHHHHHHHHHhCChHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999875443
Q ss_pred ChhHHHHHHH---HHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 241 MPQHQACLDV---IEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 241 ~~a~~~~~~~---~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++ ++.+...+++++++.|...+..++.|+|++|++++|++||+|+..
T Consensus 213 -----~~K~~~~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR~P~f~ 265 (267)
T 3r9t_A 213 -----ASKRIAYGVDDGVVVGDEPGWDRTMREMRALLKSEDAKEGPRAFAEKREPVWQ 265 (267)
T ss_dssp -----HHHHHHTTEETTEEGGGHHHHHHHHHHHHHHTTSSHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 45667 777777889999999999999999999999999999999988753
No 46
>4f47_A Enoyl-COA hydratase ECHA19; ssgcid, seattle structural genomics center for infectious DI niaid; 1.75A {Mycobacterium marinum}
Probab=100.00 E-value=1.3e-49 Score=414.60 Aligned_cols=253 Identities=25% Similarity=0.346 Sum_probs=214.4
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccccc
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (724)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++++++|+++|+|||||.|++||+|+|++++...........
T Consensus 20 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~- 97 (278)
T 4f47_A 20 PDALVEQ-RGHTLIVTMNRPSRRNALSGEMMQIMVEAWDRVDNDPDIRCCILTGAGGYFCAGMDLKAATKKPPGDSFKD- 97 (278)
T ss_dssp CSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCC--------------------
T ss_pred CceEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCCCcccCCcChHhhhccchhhhHHH-
Confidence 5688898 7899999999995 799999999999999999999999999999999999999999999865432211110
Q ss_pred chhHHHHHHHHHh---cCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 83 PDVSVELVVNLIE---DCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 83 ~~~~~~~~~~~l~---~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
......++ +.+. ++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 98 ~~~~~~~~-~~l~~~~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~a 176 (278)
T 4f47_A 98 GSYDPSRI-DALLKGRRLKKPLIAAVEGPAIAGGTEILQGTDIRVAAESAKFGISEAKWSLYPMGGSAVRLVRQIPYTVA 176 (278)
T ss_dssp ---CTTCB-TTTTBSCCCSSCEEEEECSEEETHHHHHHTTCSEEEEETTCEEECCGGGGTCCCTTSHHHHHHHHSCHHHH
T ss_pred HHHHHHHH-HHHHHhcCCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhCHHHH
Confidence 00111222 3455 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|+|++++.+++.++|+++++.++.+++
T Consensus 177 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 226 (278)
T 4f47_A 177 CDLLLTGRHITAAEAKEMGLVGHVVPDGQALTKALEIAEIIAANGPLAVQ------------------------------ 226 (278)
T ss_dssp HHHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH------------------------------
T ss_pred HHHHHcCCcCCHHHHHHCCCceEeeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+..
T Consensus 227 ------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~ekr~p~f~ 276 (278)
T 4f47_A 227 ------AILRTIRETEGMHENEAFKIDTRIGIEVFLSDDAKEGPQAFAQKRKPNFQ 276 (278)
T ss_dssp ------HHHHHHHHTTTSCHHHHHHHHHHHHGGGGGSSHHHHHHHHHHTTSCCCCC
T ss_pred ------HHHHHHHHhccCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCC
Confidence 56788888888899999999999999999999999999999999988753
No 47
>3hp0_A Putative polyketide biosynthesis enoyl-COA hydratase homolog PKSH; polyketide synthase, enoyl COA hydratase,isomerase; 2.32A {Bacillus subtilis}
Probab=100.00 E-value=3.8e-49 Score=407.38 Aligned_cols=253 Identities=18% Similarity=0.179 Sum_probs=217.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccC-CCc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG-AGD 78 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~-~~~ 78 (724)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.| ++|+|||||.|++||+|+|++++..... ...
T Consensus 4 m~~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~ 81 (267)
T 3hp0_A 4 VTYQTIKVRF-QASVCYITFHRPEANNTINDTLIEECLQVLNQCETS-TVTVVVLEGLPEVFCFGADFQEIYQEMKRGRK 81 (267)
T ss_dssp -CCSSEEEEE-ETTEEEEEECCGGGTTCBCSHHHHHHHHHHHHHHHS-SCCEEEEECCSSCSBCCBCHHHHHHTTTTTCC
T ss_pred CCCceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhcC-CCEEEEEECCCCceecCcCHHHHHhcccChHH
Confidence 6788999999 8999999999996 7999999999999999999986 6999999999999999999999876421 122
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
.........+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|+|++|..+
T Consensus 82 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~ 159 (267)
T 3hp0_A 82 QASSQEPLYDLW-MKLQTGPYVTISHVRGKVNAGGLGFVSATDIAIADQTASFSLSELLFGLYPACV-LPFLIRRIGRQK 159 (267)
T ss_dssp SCCCCHHHHHHH-HHHHHSSSEEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTT-HHHHHHHHCHHH
T ss_pred HHHHHHHHHHHH-HHHHcCCCCEEEEECCEEeehHHHHHHhCCEEEEcCCCEEECchhccCcCchhH-HHHHHHHhCHHH
Confidence 233444555666 679999999999999999999999999999999999999999999999999885 778999999999
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (724)
|++|++||++++|+||+++||||+|||+.+ +.+.++++++++.|+.+++
T Consensus 160 A~ellltg~~i~A~eA~~~GLV~~vv~~~~--~~~~~~a~~la~~~p~a~~----------------------------- 208 (267)
T 3hp0_A 160 AHYMTLMTKPISVQEASEWGLIDAFDAESD--VLLRKHLLRLRRLNKKGIA----------------------------- 208 (267)
T ss_dssp HHHHHHHCCCBCHHHHHHHTSSSCBCSCTT--HHHHHHHHHHTTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCCHH--HHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999998654 3467889999998875443
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++... ...+++++.|.+.+..++.|+|++|++++|++||+|.+.+
T Consensus 209 -------~~K~~l~~~~-~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekr~P~~~~ 258 (267)
T 3hp0_A 209 -------HYKQFMSSLD-HQVSRAKATALTANQDMFSDPQNQMGIIRYVETGQFPWED 258 (267)
T ss_dssp -------HHHHHHHHHC-CHHHHHHHHHHHHHHHHTTSTTHHHHHHHHTTSCCC----
T ss_pred -------HHHHHHHhcc-cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 3456666643 3467788899999999999999999999999999999765
No 48
>4eml_A Naphthoate synthase; 1,4-dihydroxy-2-naphthoyl-coenzyme A, lyase; 2.04A {Synechocystis SP}
Probab=100.00 E-value=3.4e-49 Score=409.87 Aligned_cols=254 Identities=24% Similarity=0.299 Sum_probs=214.5
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-----CC-CCccCCCCchhhhhccC
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-----NG-GRFSGGFDINVFQKVHG 75 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g-----~g-~~F~aG~Dl~~~~~~~~ 75 (724)
++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+||||| .| ++||+|+|++++.....
T Consensus 9 ~~~v~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~~~~~G~~~F~aG~Dl~~~~~~~~ 87 (275)
T 4eml_A 9 YDDILYYK-AGGIAKIVINRPHKRNAFRPQTVFELYDAFCNAREDNRIGVVLLTGAGPHSDGKYAFCSGGDQSVRGEGGY 87 (275)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTSCCEEECCBCCC-------
T ss_pred CceEEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCcCcCCCCceeCCcChhhhhcccc
Confidence 67799999 7999999999996 79999999999999999999999999999999 88 59999999998864211
Q ss_pred CCcccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccccc
Q 004918 76 AGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (724)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G 155 (724)
.............++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|+|++|
T Consensus 88 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~~g~~~L~r~vG 166 (275)
T 4eml_A 88 IDDQGTPRLNVLDLQ-RLIRSMPKVVIALVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGFGSSYLARIVG 166 (275)
T ss_dssp -------CCCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHC
T ss_pred cchhhHHHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECcccccCCCCCccHHHHHHHHhH
Confidence 111111111234555 6789999999999999999999999999999999999999999999999998888999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (724)
..+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 167 ~~~A~~llltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------- 220 (275)
T 4eml_A 167 QKKAREIWYLCRQYSAQEAERMGMVNTVVPVDRLEEEGIQWAKEILSKSPLAIR-------------------------- 220 (275)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------
T ss_pred HHHHHHHHHhCCCcCHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH--------------------------
Confidence 999999999999999999999999999999999999999999999999875543
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|...
T Consensus 221 ----------~~K~~l~~~~~-~~~~~~~~~~~~~~~~~~s~d~~eg~~AF~ekR~p~f~ 269 (275)
T 4eml_A 221 ----------CLKAAFNADCD-GQAGLQELAGNATLLYYMTEEGSEGKQAFLEKRPPDFS 269 (275)
T ss_dssp ----------HHHHHHHHTTS-HHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCT
T ss_pred ----------HHHHHHHhhhc-cchhHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 34556665442 23344457778888999999999999999999998754
No 49
>3qxi_A Enoyl-COA hydratase ECHA1; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 2.20A {Mycobacterium marinum}
Probab=100.00 E-value=4.3e-49 Score=407.20 Aligned_cols=250 Identities=25% Similarity=0.379 Sum_probs=217.3
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccc
Q 004918 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++..........
T Consensus 13 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~ 91 (265)
T 3qxi_A 13 TEPEVLVEQ-RDRILIITINRPKAKNSVNAAVSRALADAMDRLDADAGLSVGILTGAGGSFCAGMDLKAFARGENVVVEG 91 (265)
T ss_dssp --CCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCCCCSBC-------CCCEETT
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCeeCCCChhhhhccchhhhhh
Confidence 356799999 7999999999996 79999999999999999999999999999999999999999999986532211111
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHH
Q 004918 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (724)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~ 160 (724)
... . + ..+.. ||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 92 ---~~~-~-~-~~~~~-~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~ 164 (265)
T 3qxi_A 92 ---RGL-G-F-TERPP-AKPLIAAVEGYALAGGTELALATDLIVAARDSAFGIPEVKRGLVAGGGGLLRLPERIPYAIAM 164 (265)
T ss_dssp ---TEE-T-T-TTSCC-SSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSHHHHHHHHSCHHHHH
T ss_pred ---hhh-h-H-HHhhC-CCCEEEEECCceeHHHHHHHHhCCEEEEcCCCEEECcccccCcCCcccHHHHHHHHhCHHHHH
Confidence 111 1 2 22444 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004918 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (724)
Q Consensus 161 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (724)
+|++||++++|+||+++||||+|||++++.+++.++|++|++.++.+++
T Consensus 165 ~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~------------------------------- 213 (265)
T 3qxi_A 165 ELALTGDNLSAERAHALGMVNVLAEPGAALDAAIALAEKITANGPLAVA------------------------------- 213 (265)
T ss_dssp HHHHHCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCCcCHHHHHHCCCccEeeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999875433
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||+|++.
T Consensus 214 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f~ 263 (265)
T 3qxi_A 214 -----ATKRIITESRGWSLDTRFAQQMKILFPIFTSNDAKEGAIAFAEKRPPRWT 263 (265)
T ss_dssp -----HHHHHHHHHTTCCTTTHHHHHHHHHHHHHHCHHHHHHHHHHHTTSCCCCC
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCC
Confidence 45778888888899999999999999999999999999999999988753
No 50
>2f6q_A Peroxisomal 3,2-trans-enoyl-COA isomerase; peroxisomes, fatty acid metabolism, STR genomics, structural genomics consortium, SGC; 1.95A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=3.7e-49 Score=410.95 Aligned_cols=252 Identities=23% Similarity=0.290 Sum_probs=209.4
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc--
Q 004918 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD-- 78 (724)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~-- 78 (724)
.++.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++ +|||||.|+.||+|+|++++........
T Consensus 24 ~~~~i~~~~-~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~v-~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 101 (280)
T 2f6q_A 24 GFETLVVTS-EDGITKIMFNRPKKKNAINTEMYHEIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEE 101 (280)
T ss_dssp ECSSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHSSCS-EEEEEESTTCSBCCBCC----CCCTTHHHH
T ss_pred CCCeEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHhhCCCE-EEEEeCCCCCcccCCCHHHHhhcCcchhhH
Confidence 466788998 7899999999995 8999999999999999999999999 9999999999999999998864321110
Q ss_pred -ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 79 -VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 79 -~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
...+.....+++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 102 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~ 180 (280)
T 2f6q_A 102 KAKNNAVLLREFV-GCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPA 180 (280)
T ss_dssp HHHHHHHHHHHHH-HHHHSCCSCEEEEECSCEETHHHHGGGGCSEEEEETTCEEECCTGGGTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEECCCcEEECchHhhCCCCcccHHHHHHHHhCHH
Confidence 001112234555 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 181 ~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------- 232 (280)
T 2f6q_A 181 KATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALR---------------------------- 232 (280)
T ss_dssp HHHHHHTTCCCEEHHHHHHTTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcceEECHHHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999988764332
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhh
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~ 292 (724)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+|
T Consensus 233 --------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekR~p 279 (280)
T 2f6q_A 233 --------ISKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSK 279 (280)
T ss_dssp --------HHHHHHHGGGHHHHHHHHHHHHHHHHHHHTSHHHHC-----------
T ss_pred --------HHHHHHHhhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCC
Confidence 34667777666678899999999999999999999999999999876
No 51
>3qk8_A Enoyl-COA hydratase ECHA15; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 1.60A {Mycobacterium marinum M} SCOP: c.14.1.0 PDB: 3q1t_A
Probab=100.00 E-value=1.4e-49 Score=412.47 Aligned_cols=252 Identities=22% Similarity=0.266 Sum_probs=215.6
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCC-cccc
Q 004918 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (724)
+++|.++.++++|++||||||+.|+||.+|+++|.++++.+++|+++|+|||||.|++||+|+|++++....... ....
T Consensus 12 ~~~v~~~~~~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 91 (272)
T 3qk8_A 12 FPSLRFEPGEHGVLNLVLDSPGLNSVGPQMHRDLADVWPVIDRDPDVRVVLVRGEGKAFSSGGSFELIDETIGDYEGRIR 91 (272)
T ss_dssp CTTEEEEECSTTEEEEEECCHHHHEECHHHHHHHHHHHHHHHHCTTCSEEEEEESSSCSBCEECHHHHHHHHHCHHHHHH
T ss_pred CCeEEEEEeCCCEEEEEECCCCcCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCCCCeeCCcCHHHHhccccchHHHHH
Confidence 567999994458999999999999999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (272)
T 3qk8_A 92 IMREARDLV-LNLVNLDKPVVSAIRGPAVGAGLVVALLADISVASATAKIIDGHTKLGVAAGDHAAICWPLLVGMAKAKY 170 (272)
T ss_dssp HHHHHHHHH-HHHHTCCSCEEEEECSEEEHHHHHHHHHSSEEEEETTCEEECCHHHHTSCSCSSHHHHTHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEECchhccCCCCCccHHHHHHHHhCHHHHHH
Confidence 223344556 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|++||++++|+||+++||||+|||++++.+++.++|++|++.++.+++
T Consensus 171 l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 218 (272)
T 3qk8_A 171 YLLTCETLSGEEAERIGLVSTCVDDDEVLPTATRLAENLAQGAQNAIR-------------------------------- 218 (272)
T ss_dssp HHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCcEeeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999999876544
Q ss_pred hhHHHHHHHHHHhhc---CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 242 PQHQACLDVIEEGIV---HGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~---~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++.... .+++..++.| ..++.|+|++|++++|++||+|...
T Consensus 219 ----~~K~~l~~~~~~~~~~~~~~~~~e----~~~~~s~d~~eg~~Af~ekR~p~f~ 267 (272)
T 3qk8_A 219 ----WTKRSLNHWYRMFGPTFETSLGLE----FLGFTGPDVQEGLAAHRQKRPARFT 267 (272)
T ss_dssp ----HHHHHHHHHHHHTHHHHHHHHHHH----HHHTTSSHHHHHHHHHHTTSCCCC-
T ss_pred ----HHHHHHHHHHhhcchhHHHHHHHH----HHHhCCHHHHHHHHHHHcCCCCCCC
Confidence 23344443322 2344555555 4688999999999999999998764
No 52
>1sg4_A 3,2-trans-enoyl-COA isomerase, mitochondrial; crotonase fold; HET: CO8; 1.30A {Homo sapiens} SCOP: c.14.1.3 PDB: 1xx4_A
Probab=100.00 E-value=1.3e-49 Score=410.40 Aligned_cols=250 Identities=21% Similarity=0.308 Sum_probs=212.3
Q ss_pred EEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC-CCCccCCCCchhhhhccCCCcccccch
Q 004918 6 VTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN-GGRFSGGFDINVFQKVHGAGDVSLMPD 84 (724)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~-g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 84 (724)
+.++. +++|++||||||+.|+||.+|+++|.+++++++.|+++|+|||||. |++||+|+|++++.... ......+..
T Consensus 7 v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~-~~~~~~~~~ 84 (260)
T 1sg4_A 7 VEPDA-GAGVAVMKFKNPPVNSLSLEFLTELVISLEKLENDKSFRGVILTSDRPGVFSAGLDLTEMCGRS-PAHYAGYWK 84 (260)
T ss_dssp EEEET-TTTEEEEEECCTTTTEECHHHHHHHHHHHHHHHHCTTCCEEEEEESSTEESCCEECGGGGSSCC-HHHHHHHHH
T ss_pred EEEEe-cCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCceEcCcCHHHHhccC-HHHHHHHHH
Confidence 34444 6889999999998899999999999999999999999999999999 78999999999875321 111112223
Q ss_pred hHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEe--CCceeeCcccccCccCCcchhhhhcccccHHHHHHH
Q 004918 85 VSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (724)
Q Consensus 85 ~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~--~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l 162 (724)
..++++ .+|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|++++|++++|..+|++|
T Consensus 85 ~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l 163 (260)
T 1sg4_A 85 AVQELW-LRLYQSNLVLVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRAAERA 163 (260)
T ss_dssp HHHHHH-HHHHTCSSEEEEEECEEBCHHHHHHHTTSSEEEEECCTTCCBSCCGGGGTCCCCHHHHHHHHHHHCHHHHHHH
T ss_pred HHHHHH-HHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEEecCCCCEEeCchhhhCCCCchhHHHHHHHHhCHHHHHHH
Confidence 344556 67999999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred HHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (724)
+++|++++|+||+++||||+|+|++++.+++.+++++++..|+.+++
T Consensus 164 lltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 210 (260)
T 1sg4_A 164 LQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQ--------------------------------- 210 (260)
T ss_dssp HHHTCCBCHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------------
T ss_pred HHcCCcCCHHHHHHcCCCCEecCHHHHHHHHHHHHHHHHhCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875433
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|++||+++|
T Consensus 211 ---~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~~~~ 259 (260)
T 1sg4_A 211 ---LTKAMMRKATASRLVTQRDADVQNFVSFISKDSIQKSLQMYLERLKEEK 259 (260)
T ss_dssp ---HHHHHHHHHHHHHHHTTHHHHHHHHHHHHTSHHHHHHHTC---------
T ss_pred ---HHHHHHHHhhhccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccC
Confidence 3456666666667788899999999999999999999999999999876
No 53
>2uzf_A Naphthoate synthase; lyase, menaquinone biosynthesis; HET: CAA; 2.9A {Staphylococcus aureus}
Probab=100.00 E-value=1.4e-48 Score=405.35 Aligned_cols=252 Identities=26% Similarity=0.336 Sum_probs=217.1
Q ss_pred CCcEEEEEecCcEEEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-CccCCCCchhhhhccCCCccc
Q 004918 3 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-RFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~-~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
++.+.++. +++|++|||||| +.|+||.+|+++|.++++.++.|+++|+|||||.|+ +||+|+|++++..... ....
T Consensus 12 ~~~i~~~~-~~~va~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~FcaG~Dl~~~~~~~~-~~~~ 89 (273)
T 2uzf_A 12 YDEIKYEF-YEGIAKVTINRPEVRNAFTPKTVAEMIDAFSRARDDQNVSVIVLTGEGDLAFCSGGDQKKRGHGGY-VGED 89 (273)
T ss_dssp CSSEEEEE-ETTEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSEEEECCCCCC---------CCS
T ss_pred CceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCceecCcCcHhhhcccc-chhh
Confidence 45688888 789999999999 589999999999999999999999999999999998 9999999998854211 1111
Q ss_pred cc-chhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 81 LM-PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 81 ~~-~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
.+ ......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 90 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~A 168 (273)
T 2uzf_A 90 QIPRLNVLDLQ-RLIRIIPKPVIAMVKGYAVGGGNVLNVVCDLTIAADNAIFGQTGPKVGSFDAGYGSGYLARIVGHKKA 168 (273)
T ss_dssp SSCCCTHHHHH-HHHHHSSSCEEEEECEEEETHHHHHHHHSSEEEEETTCEEECCGGGTTCCCCSTTTHHHHHHHCHHHH
T ss_pred hHHHhhHHHHH-HHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEEcCCCEEECchhhhCCCCchhHHHHHHHHhCHHHH
Confidence 11 11133555 66899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|||++++.+++.++|+++++.++.+++
T Consensus 169 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 218 (273)
T 2uzf_A 169 REIWYLCRQYNAQEALDMGLVNTVVPLEKVEDETVQWCKEIMKHSPTALR------------------------------ 218 (273)
T ss_dssp HHHHHTCCCEEHHHHHHHTSSSEEECGGGSHHHHHHHHHHHTTSCHHHHH------------------------------
T ss_pred HHHHHhCCCCCHHHHHHcCCCccccCHHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHH-HHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEA-KVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~-~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
.+|++++ ...+++++++.|. +.+..++.|+|++|++++|++||+|...
T Consensus 219 ------~~K~~l~--~~~~~~~~l~~e~~~~~~~~~~s~d~~egi~af~ekr~p~f~ 267 (273)
T 2uzf_A 219 ------FLKAAMN--ADTDGLAGLQQMAGDATLLYYTTDEAKEGRDAFKEKRDPDFD 267 (273)
T ss_dssp ------HHHHHHH--HHHSHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCCS
T ss_pred ------HHHHHHH--ccCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHhcCCCCCC
Confidence 3345555 2346889999999 9999999999999999999999888753
No 54
>3rrv_A Enoyl-COA hydratase/isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.45A {Mycobacterium avium subsp}
Probab=100.00 E-value=5.9e-49 Score=407.93 Aligned_cols=247 Identities=21% Similarity=0.280 Sum_probs=221.6
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCC-cccc
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-DVSL 81 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~-~~~~ 81 (724)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++....... ....
T Consensus 28 ~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~ 106 (276)
T 3rrv_A 28 TEIDVRA-DGALRIITLNRPDSLNSVNDDLHVGLARLWQRLTDDPTARAAVITGAGRAFSAGGDFGYLKELSADADLRAK 106 (276)
T ss_dssp TTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESTTCSBCCBCHHHHHHHHHCHHHHHH
T ss_pred CeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCcccCCcCHHHHhhcccchHHHHH
Confidence 4688888 7999999999996 89999999999999999999999999999999999999999999986532111 1112
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
+......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++
T Consensus 107 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~e 185 (276)
T 3rrv_A 107 TIRDGREIV-LGMARCRIPVVAAVNGPAVGLGCSLVALSDIVYIAENAYLADPHVQVGLVAADGGPLTWPLHISLLLAKE 185 (276)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCCSSHHHHGGGTSCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECceeeHHHHHHHHHCCEEEEeCCCEEECchhccCcCCCccHHHHHHHHhCHHHHHH
Confidence 223344556 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|++||++++|+||+++||||+|| +++.+++.++|+++++.|+.+++
T Consensus 186 llltG~~i~A~eA~~~GLv~~vv--~~l~~~a~~~A~~la~~~~~a~~-------------------------------- 231 (276)
T 3rrv_A 186 YALTGTRISAQRAVELGLANHVA--DDPVAEAIACAKKILELPQQAVE-------------------------------- 231 (276)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEEE--SSHHHHHHHHHHHHHHSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHcCCHHHHH--HHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 99999999999999999999999 89999999999999999875443
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Q 004918 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r 290 (724)
.+|++++.....+++++++.|...+..++.|+|++|++++|++||
T Consensus 232 ----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~AF~ekR 276 (276)
T 3rrv_A 232 ----STKRVLNIHLERAVLASLDYALSAESQSFVTEDFRSIVTKLADKN 276 (276)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCCC
T ss_pred ----HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHcCC
Confidence 456677777777789999999999999999999999999999986
No 55
>2j5i_A P-hydroxycinnamoyl COA hydratase/lyase; vanillin, aldolase, crotonase, coenzyme-A; 1.8A {Pseudomonas fluorescens} PDB: 2j5i_B 2vss_A* 2j5i_I 2vss_F* 2vsu_A* 2vss_E* 2vsu_F* 2vsu_E* 2vsu_C*
Probab=100.00 E-value=7.3e-49 Score=408.20 Aligned_cols=251 Identities=19% Similarity=0.293 Sum_probs=205.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccC--CCc-
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AGD- 78 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~--~~~- 78 (724)
++.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... ...
T Consensus 8 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~~ 86 (276)
T 2j5i_A 8 WKTVKVEI-EDGIAFVILNRPEKRNAMSPTLNREMIDVLETLEQDPAAGVLVLTGAGEAWTAGMDLKEYFREVDAGPEIL 86 (276)
T ss_dssp CSSEEEEE-ETEEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHTCTTEEEEEEEESTTCSBCCBCHHHHHHHHHHSCTTH
T ss_pred CceEEEEE-eCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCcCCcChhhHhhccccchhHH
Confidence 45788888 7899999999995 899999999999999999999999999999999999999999998753211 110
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
...+.......+...|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+
T Consensus 87 ~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 166 (276)
T 2j5i_A 87 QEKIRREASQWQWKLLRMYAKPTIAMVNGWCFGGGFSPLVACDLAICADEATFGLSEINWGIPPGNLVSKAMADTVGHRQ 166 (276)
T ss_dssp HHHHHHHHHHHHTTTTTTCSSCEEEEECSCEEGGGHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEEcCCCEEeCcccccCCCCcchHHHHHHHHhCHHH
Confidence 01111111222125588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (724)
|++|++||++++|+||+++||||+|||++++.+++.++++++++.|+.+++
T Consensus 167 A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~----------------------------- 217 (276)
T 2j5i_A 167 SLMYIMTGKTFGGQKAAEMGLVNESVPLAQLREVTIELARNLLEKNPVVLR----------------------------- 217 (276)
T ss_dssp HHHHHHHCCEEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHhCCcccHHHHHHcCCccEeeCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875443
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH--hCCH-HHHHHHHHHHHhh
Q 004918 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL--VMLD-TSRGLVHVFFAQR 290 (724)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~--~~s~-~~~~~~~af~~~r 290 (724)
.+|++++.+...+++++++.|.+.+..+ +.|+ |++|++++|++||
T Consensus 218 -------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~~~s~~d~~eg~~AF~ekr 265 (276)
T 2j5i_A 218 -------AAKHGFKRCRELTWEQNEDYLYAKLDQSRLLDTEGGREQGMKQFLDDK 265 (276)
T ss_dssp -------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHC----------------
T ss_pred -------HHHHHHHHHhcCCHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHhcc
Confidence 4577888888888999999998887766 6799 9999999999998
No 56
>3oc7_A Enoyl-COA hydratase; seattle structural genomics center for infectious disease, S non-pathogenic mycobacterium species, ortholog; 1.50A {Mycobacterium avium} SCOP: c.14.1.0
Probab=100.00 E-value=1.5e-48 Score=404.34 Aligned_cols=252 Identities=22% Similarity=0.323 Sum_probs=218.1
Q ss_pred CCCCcEEEE----EecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccC
Q 004918 1 MAAPRVTME----VGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG 75 (724)
Q Consensus 1 M~~~~v~~~----~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~ 75 (724)
|+ +.+.++ . +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.....
T Consensus 5 m~-~~v~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~ 82 (267)
T 3oc7_A 5 MD-ALVDYAGPAAT-GGPVARLTLNSPHNRNALSTALVSQLHQGLRDASSDPAVRVVVLAHTGGTFCAGADLSEAGSGGS 82 (267)
T ss_dssp CC-SSEEEECHHHH-SSSEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSEEECCBC---------
T ss_pred cc-cccCCCCccce-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCceeCCcCchhhhhccC
Confidence 44 568888 6 7899999999996 799999999999999999999999999999999999999999999862111
Q ss_pred CCcc----cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhc
Q 004918 76 AGDV----SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLP 151 (724)
Q Consensus 76 ~~~~----~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~ 151 (724)
.... ..+.....+++ .++.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 161 (267)
T 3oc7_A 83 PSSAYDMAVERAREMAALM-RAIVESRLPVIAAIDGHVRAGGFGLVGACDIAVAGPRSSFALTEARIGVAPAIISLTLLP 161 (267)
T ss_dssp --CHHHHHHHHHHHHHHHH-HHHHHCSSCEEEEECSEEETTHHHHHHHSSEEEECTTCEEECCGGGGTCCCTTTHHHHTT
T ss_pred chhhhhhHHHHHHHHHHHH-HHHHhCCCCEEEEEcCeecccchHHHHHCCEEEEcCCCEEeCcccccCCCcchhHHHHHH
Confidence 1111 01233444556 679999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHH
Q 004918 152 RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLAR 231 (724)
Q Consensus 152 r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (724)
++|..+|++|++||++++|+||+++||||+| ++++.+++.+++++|++.++.+++
T Consensus 162 -~vG~~~A~~l~ltg~~~~a~eA~~~GLv~~v--~~~l~~~a~~~a~~la~~~~~a~~---------------------- 216 (267)
T 3oc7_A 162 -KLSARAAARYYLTGEKFDARRAEEIGLITMA--AEDLDAAIDQLVTDVGRGSPQGLA---------------------- 216 (267)
T ss_dssp -TSCHHHHHHHHHHCCCBCHHHHHHHTSSSEE--CSSHHHHHHHHHHHHHTSCHHHHH----------------------
T ss_pred -HhCHHHHHHHHHcCCccCHHHHHHCCChhhh--hHHHHHHHHHHHHHHHhCCHHHHH----------------------
Confidence 8999999999999999999999999999999 789999999999999998875443
Q ss_pred HHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 232 LQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 232 ~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|++
T Consensus 217 --------------~~K~~l~~~~~~~l~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~p~f 265 (267)
T 3oc7_A 217 --------------ASKALTTAAVLERFDRDAERLAEESARLFVSDEAREGMLAFLEKRSPNW 265 (267)
T ss_dssp --------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHTCCCTT
T ss_pred --------------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 4567777777778999999999999999999999999999999998775
No 57
>3lao_A Enoyl-COA hydratase/isomerase; alpha-beta sandwich, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.3e-49 Score=408.13 Aligned_cols=247 Identities=25% Similarity=0.316 Sum_probs=192.2
Q ss_pred CCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccc
Q 004918 2 AAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
+++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.|+++|+|||||.|+.||+|+|++++....... ..
T Consensus 10 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~ 87 (258)
T 3lao_A 10 GPGRVTREQ-RGHLFLIGLDRAGKRNAFDSAMLADLALAMGEYERSEESRCAVLFAHGEHFTAGLDLMELAPKLAAS-GF 87 (258)
T ss_dssp SSCCEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCBCHHHHGGGCBTT-BC
T ss_pred CCCeEEEEE-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCCeecCcCHHHHhhccchh-hH
Confidence 356799999 8999999999995 79999999999999999999999999999999999999999999987643222 11
Q ss_pred ccchhHHHHHHHHH-hcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 81 LMPDVSVELVVNLI-EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 81 ~~~~~~~~~~~~~l-~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
.+.....+.+ .++ .++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|
T Consensus 88 ~~~~~~~~~~-~~l~~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A 166 (258)
T 3lao_A 88 RYPDGGVDPW-GVVQPRRSKPLVVAVQGTCWTAGIELMLNADIAVAARGTRFAHLEVLRGIPPLGGSTVRFPRAAGWTDA 166 (258)
T ss_dssp CCCTTCCCTT-SCSSSCCCSCEEEEECSEEETHHHHHHHTSSEEEEETTCEEECGGGGTCCCSSCCCCSHHHHHHCHHHH
T ss_pred HHHHHHHHHH-HHHHHhCCCCEEEEECCEeEhHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHHH
Confidence 1222222334 557 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|+|++++.+++.++|+++++.|+.+++
T Consensus 167 ~~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 216 (258)
T 3lao_A 167 MRYILTGDEFDADEALRMRLLTEVVEPGEELARALEYAERIARAAPLAVR------------------------------ 216 (258)
T ss_dssp HHHHTTCCCEEHHHHHHTTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHcCCCcEeeChhHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875433
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~ 287 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 217 ------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~AF~ 258 (258)
T 3lao_A 217 ------AALQSAFQGRDEGDDAALSRVNESLAALIGSEDVREGVLAMV 258 (258)
T ss_dssp ------HHHHHHHHHTC-------------------------------
T ss_pred ------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHhhC
Confidence 467788888888999999999999999999999999999995
No 58
>3t89_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.95A {Escherichia coli} PDB: 3t88_A 4elx_A 4elw_A 4els_A 3h02_A 2iex_A
Probab=100.00 E-value=1.2e-48 Score=407.89 Aligned_cols=257 Identities=25% Similarity=0.341 Sum_probs=215.7
Q ss_pred CCCCcEEEEEec-CcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCCC
Q 004918 1 MAAPRVTMEVGN-DGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAG 77 (724)
Q Consensus 1 M~~~~v~~~~~~-~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~ 77 (724)
|++++|.++. + ++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.| ++||+|+|++++.......
T Consensus 24 ~~~~~v~~~~-~~~~va~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~~FcaG~Dl~~~~~~~~~~ 102 (289)
T 3t89_A 24 EGFEDIRYEK-STDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGDQKVRGDYGGYK 102 (289)
T ss_dssp TTCSSEEEEE-ETTSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECCBCCC---------
T ss_pred CCCCeEEEEE-ecCCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCCCccCCCChhhhhccccch
Confidence 4567899999 6 899999999996 7999999999999999999999999999999999 4999999999885422111
Q ss_pred c-ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccH
Q 004918 78 D-VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (724)
Q Consensus 78 ~-~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~ 156 (724)
+ ..........++ +.|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|+++++++|+|++|.
T Consensus 103 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~~~~g~~~L~r~vG~ 181 (289)
T 3t89_A 103 DDSGVHHLNVLDFQ-RQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQ 181 (289)
T ss_dssp -------CTHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSTTTHHHHHHHCH
T ss_pred hhhHHHHHHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEeCCCEEeccccccCCCCCchHHHHHHHhcCH
Confidence 1 111112234555 67999999999999999999999999999999999999999999999988888889999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004918 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (724)
Q Consensus 157 ~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (724)
.+|++|++||++|+|+||+++||||+|||++++.+++.++|++|+..++.+++
T Consensus 182 ~~A~~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~la~~~~~a~~--------------------------- 234 (289)
T 3t89_A 182 KKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALR--------------------------- 234 (289)
T ss_dssp HHHHHHHHHCCCEEHHHHHHHTSSSEEECGGGHHHHHHHHHHHHHTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCcccHHHHHHCCCceEeeCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999875443
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.... ......+.|.+.+..++.|+|++|++++|++||+|....
T Consensus 235 ---------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f~~ 284 (289)
T 3t89_A 235 ---------CLKAALNADCD-GQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSK 284 (289)
T ss_dssp ---------HHHHHHHHTTS-HHHHHHHHHHHHHHHHTTSSTTTHHHHHHHTTSCCCCTT
T ss_pred ---------HHHHHHHhhcc-cchHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCC
Confidence 34556665543 233444577888889999999999999999999988643
No 59
>2a7k_A CARB; crotonase, antibiotic, beta-lactam, biosynthetic protein; 2.24A {Pectobacterium carotovorum} SCOP: c.14.1.3 PDB: 2a81_A*
Probab=100.00 E-value=5.9e-49 Score=403.69 Aligned_cols=247 Identities=24% Similarity=0.312 Sum_probs=200.0
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEc-CCCCccCCCCchhhhhccCCCcccccc
Q 004918 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTG-NGGRFSGGFDINVFQKVHGAGDVSLMP 83 (724)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g-~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (724)
|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+||||| .|++||+|+|++++...........+.
T Consensus 2 v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 80 (250)
T 2a7k_A 2 VFEEN-SDEVRVITLDHPNKHNPFSRTLETSVKDALARANADDSVRAVVVYGGAERSFSAGGDFNEVKQLSRSEDIEEWI 80 (250)
T ss_dssp EEEEE-ETTEEEEEECCSSTTCBCCHHHHHHHHHHHHHHHHCTTCCEEEEECCTTSCSBCBSCHHHHHTC-CHHHHHHHH
T ss_pred eEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCCccCCcCHHHHhhcCchhhHHHHH
Confidence 66777 7899999999995 89999999999999999999999999999999 999999999999886432111001122
Q ss_pred hhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHH
Q 004918 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (724)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ 163 (724)
...++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++ +|++++|..+|++|+
T Consensus 81 ~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~-~l~~~vG~~~a~~l~ 158 (250)
T 2a7k_A 81 DRVIDLY-QAVLNVNKPTIAAVDGYAIGMGFQFALMFDQRLMASTANFVMPELKHGIGCSVGAA-ILGFTHGFSTMQEII 158 (250)
T ss_dssp HHHHHHH-HHHHTCCSCEEEEECSEEETHHHHHHTTSSEEEEETTCEEECCGGGGTCCCHHHHH-HHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCeEeHHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCcHHH-HHHHHhHHHHHHHHH
Confidence 2344556 67999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred HcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChh
Q 004918 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (724)
Q Consensus 164 ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (724)
+||++++|+||+++||||+|+|++++.+++.++++++++.|+.+++
T Consensus 159 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 204 (250)
T 2a7k_A 159 YQCQSLDAPRCVDYRLVNQVVESSALLDAAITQAHVMASYPASAFI---------------------------------- 204 (250)
T ss_dssp HHCCCBCHHHHHHHTCCSEEECHHHHHHHHHHHHHHHHTSCHHHHH----------------------------------
T ss_pred HcCCcccHHHHHHcCCcceecCHHHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999998875432
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004918 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (724)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~ 291 (724)
.+|+.++.+...+++++++.|.+.+..++.|+|++|++++|++||+
T Consensus 205 --~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~ekr~ 250 (250)
T 2a7k_A 205 --NTKRAVNKPFIHLLEQTRDASKAVHKAAFQARDAQGHFKNVLGKKY 250 (250)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHCC--------------------
T ss_pred --HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcCC
Confidence 4566777766677899999999999999999999999999999874
No 60
>2fbm_A Y chromosome chromodomain protein 1, telomeric IS; acetyltransferase, structural genomics, structural genomics consortium, SGC, unknown function; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=100.00 E-value=5.7e-49 Score=410.86 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=217.3
Q ss_pred CCCcEEEEEecCcEEEEEeC-CCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCC--
Q 004918 2 AAPRVTMEVGNDGVAIITLI-NPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG-- 77 (724)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~-~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~-- 77 (724)
.|+.|.++. +++|++|||| ||+ .|+||.+|+++|.++++.++.|+. |+|||||.|+.||+|+|++++.......
T Consensus 21 ~~~~v~~~~-~~~v~~itln~rp~~~Nal~~~m~~~L~~al~~~~~d~~-r~vVltg~G~~FcaG~Dl~~~~~~~~~~~~ 98 (291)
T 2fbm_A 21 TYRDIVVKK-EDGFTQIVLSTRSTEKNALNTEVIKEIVNALNSAAADDS-KLVLFSAAGSVFCCGLDFGYFVKHLRNNRN 98 (291)
T ss_dssp CCSSEEEEE-CSSEEEEEECCSSSSTTCBCHHHHHHHHHHHHHHHHSSC-SEEEEEECSSCSBCCBCHHHHHHHHHHCHH
T ss_pred CcceEEEEE-eCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCC-eEEEEECCCCCccCCcCHHHHHhcccccch
Confidence 466788998 8899999999 684 799999999999999999998875 9999999999999999999885421100
Q ss_pred -cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccH
Q 004918 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (724)
Q Consensus 78 -~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~ 156 (724)
....+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.
T Consensus 99 ~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~ 177 (291)
T 2fbm_A 99 TASLEMVDTIKNFV-NTFIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKMMGK 177 (291)
T ss_dssp HHHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCHHHHTCCCCTTHHHHHHHHHCH
T ss_pred hHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEECcHHhcCCCCcccHHHHHHHHHhH
Confidence 0111222334555 66899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004918 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (724)
Q Consensus 157 ~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (724)
.+|++|++||++++|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 178 ~~A~el~ltg~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~p~a~~--------------------------- 230 (291)
T 2fbm_A 178 ASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLE--------------------------- 230 (291)
T ss_dssp HHHHHHHTSCCEEEHHHHHHTTSCSEEECSTTSHHHHHHHHHHHTTSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999998875433
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHH-HHhhhhcCCC
Q 004918 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVF-FAQRATSKVP 296 (724)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af-~~~r~~~~~~ 296 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++.+| ++||+|....
T Consensus 231 ---------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~eg~~Af~~ekR~P~f~~ 282 (291)
T 2fbm_A 231 ---------ECKALVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKIPLLGYKAAFPP 282 (291)
T ss_dssp ---------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHTSHHHHHHHHTC-----------
T ss_pred ---------HHHHHHHhhhccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhcCCCCCCCC
Confidence 45677777766778999999999999999999999999999 9999987543
No 61
>2gtr_A CDY-like, chromodomain Y-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 1.90A {Homo sapiens} PDB: 2fw2_A
Probab=100.00 E-value=6.6e-49 Score=405.73 Aligned_cols=252 Identities=20% Similarity=0.274 Sum_probs=222.5
Q ss_pred CCcEEEEEecCcEEEEEeC-CC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCC---
Q 004918 3 APRVTMEVGNDGVAIITLI-NP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAG--- 77 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~-~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~--- 77 (724)
|+++.++. +++|++|||| || +.|+||.+|+++|.++++.++.|+ +|+|||||.|++||+|+|++++.......
T Consensus 4 ~~~i~~~~-~~~v~~itln~rp~~~Nal~~~~~~~L~~al~~~~~d~-~r~vvltg~g~~F~aG~Dl~~~~~~~~~~~~~ 81 (261)
T 2gtr_A 4 YRDIVVRK-QDGFTHILLSTKSSENNSLNPEVMREVQSALSTAAADD-SKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKR 81 (261)
T ss_dssp CSSEEEEE-ETTEEEEEECCSSSSTTEECHHHHHHHHHHHHHHHHSS-CSCEEEEESSSCSBCEECHHHHHHHHHHCHHH
T ss_pred cceEEEEE-eCCEEEEEECCCCccCCCCCHHHHHHHHHHHHHHhcCC-CEEEEEecCCCccccccCchhhhhccccchhh
Confidence 56788998 7899999999 58 479999999999999999999887 49999999999999999999875421111
Q ss_pred cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHH
Q 004918 78 DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLS 157 (724)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~ 157 (724)
....+.....+++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..
T Consensus 82 ~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 160 (261)
T 2gtr_A 82 ESTKMAEAIRNFV-NTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKIMGGA 160 (261)
T ss_dssp HHHHHHHHHHHHH-HHHHHCCSCEEEEECSCEETHHHHTGGGSSEEEEETTCEEECCTTTTTCCCCTTHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCccchHHHHHHHHcCHH
Confidence 0111222334555 668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHh
Q 004918 158 KAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKT 237 (724)
Q Consensus 158 ~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (724)
+|++|++||++++|+||+++||||+|||++++.+++.++++++++.|+.+++
T Consensus 161 ~a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~p~a~~---------------------------- 212 (261)
T 2gtr_A 161 SANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLE---------------------------- 212 (261)
T ss_dssp HHHHHHHHCCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH----------------------------
T ss_pred HHHHHHHcCCCCCHHHHHHCCCcccccChhHHHHHHHHHHHHHHhCCHHHHH----------------------------
Confidence 9999999999999999999999999999999999999999999998875433
Q ss_pred CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004918 238 APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (724)
Q Consensus 238 ~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~ 293 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|++||+|+
T Consensus 213 --------~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~af~ekr~P~ 260 (261)
T 2gtr_A 213 --------ESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRKIDE 260 (261)
T ss_dssp --------HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHSTTTTHHHHHHHHHHHHC
T ss_pred --------HHHHHHHhccccCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHccCCCC
Confidence 456677777666789999999999999999999999999999999886
No 62
>3h0u_A Putative enoyl-COA hydratase; structural genomics, isomerase, PSI-2, protein structure initiative; 1.50A {Streptomyces avermitilis}
Probab=100.00 E-value=2.2e-48 Score=405.98 Aligned_cols=247 Identities=21% Similarity=0.287 Sum_probs=221.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCC-ccCCCCchhhhhccCCCcc--
Q 004918 3 APRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGR-FSGGFDINVFQKVHGAGDV-- 79 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~-F~aG~Dl~~~~~~~~~~~~-- 79 (724)
++.|.++. +++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|+. ||+|+|++++.........
T Consensus 7 ~~~v~~~~-~~~Va~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~ff~~G~Dl~~~~~~~~~~~~~~ 85 (289)
T 3h0u_A 7 YETIKARL-DGTVLSATFNAPPMNLIGPEVVRDLVALLEELAHPTAPRVVIFDSADADFFFPHVDMTKVPEYTAEAAKAG 85 (289)
T ss_dssp CSSEEEEE-ETTEEEEEECCTTTCCBCHHHHHHHHHHHHHTTSTTSCSEEEEEECSSSEEECSBCTTCHHHHHHHHHTTS
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCceeCCcCHHHHhhcCcchhhhH
Confidence 67899999 7999999999999999999999999999999999999999999999965 5667799988653211100
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
........+++ .+|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++|++++|+|++|..+
T Consensus 86 ~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~ 164 (289)
T 3h0u_A 86 GPGDASLGMLF-RKLSQLPAVTIAKLRGRARGAGSEFLLACDMRFASRENAILGQPEVGIGAPPGAGAIQHLTRLLGRGR 164 (289)
T ss_dssp STTCCSHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECTHHHHTSCCCSSHHHHHHHHHCHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEECCEeehhhHHHHHhCCEEEEeCCCcEEeCchhhcCCCCCccHHHHHHHHhCHHH
Confidence 12333455666 6799999999999999999999999999999999998 999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (724)
|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.||.+++
T Consensus 165 A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~la~~~p~a~~----------------------------- 215 (289)
T 3h0u_A 165 ALEAVLTSSDFDADLAERYGWVNRAVPDAELDEFVAGIAARMSGFPRDALI----------------------------- 215 (289)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSSSEEECHHHHHHHHHHHHHHHHTSCHHHHH-----------------------------
T ss_pred HHHHHHcCCCCCHHHHHHCCCccEecCHHHHHHHHHHHHHHHHhCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875443
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Q 004918 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFA 288 (724)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~ 288 (724)
.+|++++.... +++++++.|.+.+..++.|+|++|++++|++
T Consensus 216 -------~~K~~l~~~~~-~l~~~l~~e~~~~~~~~~s~d~~egi~AFle 257 (289)
T 3h0u_A 216 -------AAKSAINAISL-PAPAEVRADAALFQQLVRGEKVQQRTAELFK 257 (289)
T ss_dssp -------HHHHHHHHHHS-CCHHHHHHHHHHHHHHTTSHHHHHHHHHHHH
T ss_pred -------HHHHHHHhhcc-cHHHHHHHHHHHHHHHhCCHHHHHHHHHHhC
Confidence 45677887777 8999999999999999999999999999999
No 63
>1mj3_A Enoyl-COA hydratase, mitochondrial; homohexamer, lyase; HET: HXC; 2.10A {Rattus norvegicus} SCOP: c.14.1.3 PDB: 2dub_A* 1dub_A* 1ey3_A* 2hw5_A*
Probab=100.00 E-value=2e-48 Score=401.67 Aligned_cols=253 Identities=33% Similarity=0.430 Sum_probs=223.3
Q ss_pred CCCcEEEEEe--cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc
Q 004918 2 AAPRVTMEVG--NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD 78 (724)
Q Consensus 2 ~~~~v~~~~~--~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~ 78 (724)
+|+.+.++.. .++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 2 ~~~~~~~~~~v~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~ 81 (260)
T 1mj3_A 2 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDC 81 (260)
T ss_dssp CCSSEEEEEESGGGCEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSEEECCBCHHHHTTCCHHHH
T ss_pred CcccceeecccCcCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCCCCccCCcChHhhhcccchHH
Confidence 4667777762 5689999999995 799999999999999999999999999999999999999999998753211000
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
........+ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+
T Consensus 82 ---~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~ 157 (260)
T 1mj3_A 82 ---YSGKFLSHW-DHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSL 157 (260)
T ss_dssp ---HHC--CCGG-GGGGGCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSSTTTHHHHHHCHHH
T ss_pred ---HHHHHHHHH-HHHHhCCCCEEEEECCEEEeHHHHHHHhCCEEEEcCCCEEeCcccccCCCCCccHHHHHHHHhCHHH
Confidence 000011123 4588999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhC
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTA 238 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (724)
|++|++||++++|+||+++||||+|+|++++.+++.+++++++..++.+++
T Consensus 158 a~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~----------------------------- 208 (260)
T 1mj3_A 158 AMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSKIIVA----------------------------- 208 (260)
T ss_dssp HHHHHHHCCCEEHHHHHHHTSCSEEECTTTHHHHHHHHHHHHHHSCHHHHH-----------------------------
T ss_pred HHHHHHcCCcCCHHHHHHcCCccEEeChHHHHHHHHHHHHHHHcCCHHHHH-----------------------------
Confidence 999999999999999999999999999999999999999999998875433
Q ss_pred CCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 239 PNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 239 ~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|..
T Consensus 209 -------~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~~kr~p~~ 257 (260)
T 1mj3_A 209 -------MAKESVNAAFEMTLTEGNKLEKKLFYSTFATDDRREGMSAFVEKRKANF 257 (260)
T ss_dssp -------HHHHHHHGGGSSCHHHHHHHHHHHHHHGGGSHHHHHHHHHHHTTSCCCC
T ss_pred -------HHHHHHHHhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCC
Confidence 4677888888889999999999999999999999999999999988764
No 64
>1uiy_A Enoyl-COA hydratase; lyase, beta-oxidation, crotonase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.85A {Thermus thermophilus} SCOP: c.14.1.3
Probab=100.00 E-value=1.4e-48 Score=401.64 Aligned_cols=248 Identities=25% Similarity=0.358 Sum_probs=220.0
Q ss_pred EEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhcc--CCCccccc
Q 004918 6 VTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVH--GAGDVSLM 82 (724)
Q Consensus 6 v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~--~~~~~~~~ 82 (724)
+.++ +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.... ...+....
T Consensus 2 i~~~--~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~ 79 (253)
T 1uiy_A 2 VQVE--KGHVAVVFLNDPERRNPLSPEMALSLLQALDDLEADPGVRAVVLTGRGKAFSAGADLAFLERVTELGAEENYRH 79 (253)
T ss_dssp EEEE--CSSEEEEEECCGGGTCCCCHHHHHHHHHHHHHHHHCTTCCEEEEEESSSCSBCCCCHHHHHHHTTSCHHHHHHH
T ss_pred EEEE--eCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCcccCcChHHHHhcccCCchhHHHH
Confidence 4555 5789999999996 89999999999999999999999999999999999999999999886531 11100000
Q ss_pred chhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHH
Q 004918 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (724)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l 162 (724)
....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++| +++|++++|..+|++|
T Consensus 80 ~~~~~~~~-~~i~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g-~~~l~r~vG~~~a~~l 157 (253)
T 1uiy_A 80 SLSLMRLF-HRVYTYPKPTVAAVNGPAVAGGAGLALACDLVVMDEEARLGYTEVKIGFVAALV-SVILVRAVGEKAAKDL 157 (253)
T ss_dssp HHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHTSSEEEEETTCEEECCHHHHTCCCHHH-HHHHHHHSCHHHHHHH
T ss_pred HHHHHHHH-HHHHhCCCCEEEEECCeeeHHHHHHHHhCCEEEEcCCcEEeCcccccCcCCchH-HHHHHHHhCHHHHHHH
Confidence 01134555 679999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred HHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (724)
++||++++|+||+++||||+|+|++++.+++.++++++++.++.+++
T Consensus 158 ~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 204 (253)
T 1uiy_A 158 LLTGRLVEAREAKALGLVNRIAPPGKALEEAKALAEEVAKNAPTSLR--------------------------------- 204 (253)
T ss_dssp HHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHHHSCHHHHH---------------------------------
T ss_pred HHhCCccCHHHHHHCCCcceecChhHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998864432
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004918 243 QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (724)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~ 293 (724)
.+|+.++.+...+++++++.|.+.+..++.|+|++|++++|++||+|+
T Consensus 205 ---~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~eg~~af~~kr~p~ 252 (253)
T 1uiy_A 205 ---LTKELLLALPGMGLEDGFRLAALANAWVRETGDLAEGIRAFFEKRPPR 252 (253)
T ss_dssp ---HHHHHHHHGGGSCHHHHHHHHHHHHHHGGGCHHHHHHHHHHHTTSCCC
T ss_pred ---HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHhCcCCCC
Confidence 457788888888999999999999999999999999999999988765
No 65
>3t8b_A 1,4-dihydroxy-2-naphthoyl-COA synthase; crotonase superfamily, lyase; 1.65A {Mycobacterium tuberculosis} PDB: 3t8a_A 1rjm_A* 1rjn_A* 1q52_A 1q51_A
Probab=100.00 E-value=1.1e-48 Score=414.40 Aligned_cols=256 Identities=24% Similarity=0.268 Sum_probs=187.2
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCC-------CccCCCCchhhhhc
Q 004918 3 APRVTMEVG-NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGG-------RFSGGFDINVFQKV 73 (724)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~-------~F~aG~Dl~~~~~~ 73 (724)
+++|.++.+ +++|++||||||+ +|+||.+|+++|.++++.++.|+++|+|||||.|+ .||+|+|++++...
T Consensus 54 ~~~i~~~~~~~~gVa~ItlnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvVVltG~G~~~~~~~~~FcaG~Dl~~~~~~ 133 (334)
T 3t8b_A 54 LTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMSPDVGVVLLTGNGPSPKDGGWAFCSGGDQRIRGRS 133 (334)
T ss_dssp CSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHCTTCCEEEEEECCCCTTTCCCEEECCSCTTTTC--
T ss_pred CceEEEEEeccCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCcCCCCCcccCCCCHHHhhcc
Confidence 567999983 4899999999996 69999999999999999999999999999999996 89999999987432
Q ss_pred cCC----------CcccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEe-CCceeeCcccccCccC
Q 004918 74 HGA----------GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIP 142 (724)
Q Consensus 74 ~~~----------~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~-~~a~f~~pe~~~G~~P 142 (724)
... ............++ +.|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~kPvIAaV~G~A~GgG~~LalacD~riAs~~~A~f~~pe~~lGl~p 212 (334)
T 3t8b_A 134 GYQYASGDTADTVDVARAGRLHILEVQ-RLIRFMPKVVICLVNGWAAGGGHSLHVVCDLTLASREYARFKQTDADVGSFD 212 (334)
T ss_dssp --------------------CCHHHHH-HHHHHSSSEEEEEECSEEETHHHHHHHHSSEEEEETTTCEEECCCTTCSSSS
T ss_pred cccccccccchhhhHHHHHHHHHHHHH-HHHHhCCCCEEEEECCccccCcchhHhhCCEEEEeCCCcEEECcccccCCCC
Confidence 110 00001111233455 67899999999999999999999999999999999 9999999999999999
Q ss_pred CcchhhhhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHH
Q 004918 143 GFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSE 222 (724)
Q Consensus 143 ~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (724)
++|++++|+|++|..+|++|++||++|+|+||+++||||+|||++++++++.++|++|++.++.+++
T Consensus 213 ~~gg~~~L~r~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~A~~ia~~~p~a~~------------- 279 (334)
T 3t8b_A 213 GGYGSAYLARQVGQKFAREIFFLGRTYTAEQMHQMGAVNAVAEHAELETVGLQWAAEINAKSPQAQR------------- 279 (334)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH-------------
T ss_pred cccHHHHHHHHhhHHHHHHHHHhCCcCCHHHHHHCCCCcEecCHHHHHHHHHHHHHHHHhCCHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999876543
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|++++.... .+...+..|.+.+..++.|+|++|++.+|++||+|...+
T Consensus 280 -----------------------~~K~~l~~~~~-~~~~~~~~e~~~~~~~~~s~d~~Eg~~AFleKR~P~f~~ 329 (334)
T 3t8b_A 280 -----------------------MLKFAFNLLDD-GLVGQQLFAGEATRLAYMTDEAVEGRDAFLQKRPPDWSP 329 (334)
T ss_dssp -----------------------HHHHHHHHTCC-CC-------------------------------------
T ss_pred -----------------------HHHHHHHhhhc-chHHHHHHHHHHHHHHhcCHHHHHHHHHHHcCCCCCCCC
Confidence 34566666543 455566778888899999999999999999999988643
No 66
>3l3s_A Enoyl-COA hydratase/isomerase family protein; crotonase superfamily, dimer of trimers, PSI-2, NYSGXRC, structural genomics; 2.32A {Ruegeria pomeroyi}
Probab=100.00 E-value=2.5e-48 Score=401.34 Aligned_cols=250 Identities=24% Similarity=0.314 Sum_probs=206.5
Q ss_pred CCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccC--CC--
Q 004918 2 AAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHG--AG-- 77 (724)
Q Consensus 2 ~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~--~~-- 77 (724)
+++.+.++..+++|++||||||+.|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..... ..
T Consensus 4 ~~~~~~~~~~~~~v~~itlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~ 83 (263)
T 3l3s_A 4 SQDGLLGEVLSEGVLTLTLGRAPAHPLSRAMIAALHDALRRAMGDDHVHVLVIHGPGRIFCAGHDLKEIGRHRADPDEGR 83 (263)
T ss_dssp ----CEEEEESSSEEEEEECSTTTCCCCHHHHHHHHHHHHHHHTCTTCCEEEEECCSSEEECCSCSCCCCC-----CCSH
T ss_pred CccceEEEEeeCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCccCCcChHHHhhccccccccH
Confidence 46677777768899999999995599999999999999999999999999999999999999999998865311 11
Q ss_pred -cccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccH
Q 004918 78 -DVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGL 156 (724)
Q Consensus 78 -~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~ 156 (724)
....+......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| +|++++|+|++|.
T Consensus 84 ~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~~-~g~~~~l~r~vG~ 161 (263)
T 3l3s_A 84 AFVTDLFEACSALM-LDLAHCPKPTIALVEGIATAAGLQLMAACDLAYASPAARFCLPGVQNGGFC-TTPAVAVSRVIGR 161 (263)
T ss_dssp HHHHHHHHHHHHHH-HHHHTCSSCEEEEESSEEETHHHHHHHHSSEEEECTTCEEECCTTTTTSCC-HHHHHHHHTTSCH
T ss_pred HHHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEEHHHHHHHHHCCEEEecCCCEEeCchhccCCCC-ccHHHHHHHHcCH
Confidence 1112223344555 679999999999999999999999999999999999999999999999995 6789999999999
Q ss_pred HHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHH
Q 004918 157 SKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKK 236 (724)
Q Consensus 157 ~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (724)
.+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 162 ~~A~~l~ltg~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------- 214 (263)
T 3l3s_A 162 RAVTEMALTGATYDADWALAAGLINRILPEAALATHVADLAGALAARNQAPLR--------------------------- 214 (263)
T ss_dssp HHHHHHHHHCCEEEHHHHHHHTSSSEECCHHHHHHHHHHHHHHHHSSCHHHHH---------------------------
T ss_pred HHHHHHHHcCCCCCHHHHHHCCCccEEeCHHHHHHHHHHHHHHHHhCCHHHHH---------------------------
Confidence 99999999999999999999999999999999999999999999999875443
Q ss_pred hCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Q 004918 237 TAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQ 289 (724)
Q Consensus 237 ~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~ 289 (724)
.+|++++.....+++++++.|.+.+..++.|+|++|++++|.+.
T Consensus 215 ---------~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~Eg~~Af~~~ 258 (263)
T 3l3s_A 215 ---------RGLETLNRHLELPLEQAYALATPVMVEHFMDPGRRHLDWIDEGH 258 (263)
T ss_dssp ---------HHHHHHHHHTTSCHHHHHHHHHHHHHHHHC--------------
T ss_pred ---------HHHHHHHhhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHhhcc
Confidence 46778888888999999999999999999999999999999864
No 67
>3pe8_A Enoyl-COA hydratase; emerald biostructures, structural genomics, seattle structur genomics center for infectious disease, ssgcid, lyase; 1.60A {Mycobacterium smegmatis} PDB: 3p85_A* 3qyr_A
Probab=100.00 E-value=1.2e-48 Score=401.20 Aligned_cols=244 Identities=25% Similarity=0.382 Sum_probs=200.4
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccc
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (724)
++.+.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++....
T Consensus 8 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vvltg~g~~F~aG~Dl~~~~~~~------- 79 (256)
T 3pe8_A 8 SPVLLVDT-TDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKELGDTT------- 79 (256)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEESTTCSBCCBCTTTC-----------
T ss_pred CCcEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCccCCcCHHHHhhhH-------
Confidence 45788998 8999999999996 79999999999999999999999999999999999999999999886431
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
...... ..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|..+|++
T Consensus 80 ---~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 155 (256)
T 3pe8_A 80 ---ELPDIS-PKWPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARR 155 (256)
T ss_dssp --------C-CCCCCCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECCHHHHTCCCCSSHHHHHHHHHCHHHHHH
T ss_pred ---HHHHHH-HHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEcCCCEEECchhhhCCCCcccHHHHHHHhcCHHHHHH
Confidence 011222 4578999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|+++|++++|+||+++||||+|+|++++.+++.++|+++++.|+.+++
T Consensus 156 l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 203 (256)
T 3pe8_A 156 MSLTGDYLSAQDALRAGLVTEVVAHDDLLTAARRVAASIVGNNQKAVR-------------------------------- 203 (256)
T ss_dssp HHHHCCCEEHHHHHHHTSCSCEECGGGHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCCeEEeCHhHHHHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875443
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH---hCCHHHHHHHHHHHHhhhhcC
Q 004918 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKEL---VMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~---~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.+...+++++++.|.+.+... ..++|+++++.+|++|+++.+
T Consensus 204 ----~~K~~~~~~~~~~~~~~l~~e~~~~~~~~~~~~~~d~~e~~~aflek~k~~~ 255 (256)
T 3pe8_A 204 ----ALLDSYHRIDALQTGGALWAEAEAARQWMRSTSGDDIAASRASVIERGRSQV 255 (256)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred ----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHhccCccC
Confidence 4567788877888999999999997654 677788999999999999864
No 68
>4di1_A Enoyl-COA hydratase ECHA17; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis, ortholog; 2.25A {Mycobacterium marinum}
Probab=100.00 E-value=5.6e-48 Score=400.11 Aligned_cols=243 Identities=28% Similarity=0.448 Sum_probs=215.4
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
|+ +.|.++. +++|++||||||+.|+||.+|+.+|.++++.++.|+++|+|||||.|++||+|+|++++..... ....
T Consensus 22 m~-~~v~~~~-~~~Va~ItlnrP~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~-~~~~ 98 (277)
T 4di1_A 22 MN-EFVSVVA-DQGLATLVVSRPPTNAMTRQVYREIVAAADELGRRDDIGAVVLFGGHEIFSAGDDMPELRTLNA-PEAD 98 (277)
T ss_dssp -C-CSEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECCSSCSBCCBCHHHHHTCCH-HHHH
T ss_pred CC-ceEEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCEecCcCcccccccCh-HHHH
Confidence 44 5688999 7999999999996699999999999999999999999999999999999999999999875321 1122
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHH
Q 004918 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (724)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~ 160 (724)
.+.....+++ .+|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 99 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~r~vG~~~A~ 177 (277)
T 4di1_A 99 TAARVRLEAI-DAVAAIPKPTVAAVTGYALGAGLTLALAADWRVSGDNVKFGATEILAGLIPGGGGMGRLTRVVGSSRAK 177 (277)
T ss_dssp HHHHHHHHHH-HHHHHCSSCEEEEECSEEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCTTHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCeEehhHHHHHHhCCEEEEcCCCEEECcccccCCCCCchHHHHHHHHhCHHHHH
Confidence 2233444556 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004918 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (724)
Q Consensus 161 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (724)
+|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 178 ~llltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 226 (277)
T 4di1_A 178 ELVFSGRFFDAEEALALGLIDDMVAPDDVYDSAVAWARRYLECPPRALA------------------------------- 226 (277)
T ss_dssp HHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHTTTTSCHHHHH-------------------------------
T ss_pred HHHHcCCCCCHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999998875433
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004918 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (724)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~ 293 (724)
.+|++++.+...+++++++.|.+.+..++.|+ +||+|+
T Consensus 227 -----~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~----------ekR~P~ 264 (277)
T 4di1_A 227 -----AAKAVINDVFELEATERAAAERRRYVELFAAG----------QRGPDG 264 (277)
T ss_dssp -----HHHHHHHHTTTSCHHHHHHHHHHHHHHTTSGG----------GC----
T ss_pred -----HHHHHHHhhhcCCHHHHHHHHHHHHHHHhcCc----------ccCCCc
Confidence 56788899889999999999999999999998 888877
No 69
>3he2_A Enoyl-COA hydratase ECHA6; fatty acid metabolism, lipid metabolism, lyase, structural genomics; HET: PGE; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.3e-48 Score=396.59 Aligned_cols=241 Identities=26% Similarity=0.358 Sum_probs=209.1
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccc
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSL 81 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~ 81 (724)
++.|.++. +++|++||||||+ .|+||.+|+++|.+++++++.| ++|+|||||.|++||+|+|++... ....
T Consensus 20 ~~~i~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d-~vr~vVltg~G~~FcaG~Dl~~~~------~~~~ 91 (264)
T 3he2_A 20 GSMIGITQ-AEAVLTIELQRPERRNALNSQLVEELTQAIRKAGDG-SARAIVLTGQGTAFCAGADLSGDA------FAAD 91 (264)
T ss_dssp --CEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHCC----CCSEEEEEESSSCSBCCBCCTTCT------TGGG
T ss_pred CCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhC-CceEEEEECCCCCccCCcCCccch------hhHH
Confidence 35688888 8899999999995 7999999999999999999988 999999999999999999998311 1122
Q ss_pred cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHH
Q 004918 82 MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 82 ~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..+|++
T Consensus 92 ~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~vG~~~A~~ 170 (264)
T 3he2_A 92 YPDRLIELH-KAMDASPMPVVGAINGPAIGAGLQLAMQCDLRVVAPDAFFQFPTSKYGLALDNWSIRRLSSLVGHGRARA 170 (264)
T ss_dssp HHHHHHHHH-HHHHHCSSCEEEEECSCEETHHHHHHHHSSEEEECTTCEEECTHHHHTCCCCHHHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHHH-HHHHhCCCCEEEEECCcEEcchhHHHHhCCEEEEcCCCEEECcccccCcCCcchHHHHHHHHhCHHHHHH
Confidence 233445566 6799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|++||++++|+||+++||||+|++ .+++.++|+++++.|+.+++
T Consensus 171 llltG~~i~A~eA~~~GLV~~v~~----~~~a~~~A~~la~~~p~a~~-------------------------------- 214 (264)
T 3he2_A 171 MLLSAEKLTAEIALHTGMANRIGT----LADAQAWAAEIARLAPLAIQ-------------------------------- 214 (264)
T ss_dssp HHHHCCCEEHHHHHHHTSCSEECC----HHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCccHHHHHHCCCeEEEec----HHHHHHHHHHHHcCCHHHHH--------------------------------
Confidence 999999999999999999999996 36789999999998875443
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
.+|++++.. .+++++++.|.+.+..++.|+|++|++.+|++||+|..
T Consensus 215 ----~~K~~l~~~--~~~~~~~~~e~~~~~~~~~s~d~~Eg~~AF~ekR~P~f 261 (264)
T 3he2_A 215 ----HAKRVLNDD--GAIEEAWPAHKELFDKAWGSQDVIEAQVARMEKRPPKF 261 (264)
T ss_dssp ----HHHHHHHTS--SCSCCCCHHHHHHHHHHHTSHHHHHHHHHHHTTSCCCC
T ss_pred ----HHHHHHHcc--CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 345666665 34667788899999999999999999999999999875
No 70
>1hzd_A AUH, AU-binding protein/enoyl-COA hydratase; RNA-binding protein,enoyl-COA hydratase, riken structural genomics/proteomics initiative, RSGI; 2.20A {Homo sapiens} SCOP: c.14.1.3 PDB: 2zqq_A 2zqr_A
Probab=100.00 E-value=1.5e-47 Score=397.50 Aligned_cols=252 Identities=26% Similarity=0.418 Sum_probs=218.0
Q ss_pred cEEEEE---ecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCCCcc
Q 004918 5 RVTMEV---GNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGDV 79 (724)
Q Consensus 5 ~v~~~~---~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~ 79 (724)
.+.++. .+++|++||||||+ .|++|.+|+++|.++++.+++|+++|+|||||.| ++||+|+|++++..... .+.
T Consensus 9 ~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~~-~~~ 87 (272)
T 1hzd_A 9 ELRVRHLEEENRGIVVLGINRAYGKNSLSKNLIKMLSKAVDALKSDKKVRTIIIRSEVPGIFCAGADLKERAKMSS-SEV 87 (272)
T ss_dssp SEEEEECCGGGTTEEEEEECCGGGTTCBCTTHHHHHHHHHHHHHHCSSCSEEEEEESBTEEEECCBCHHHHTTSCH-HHH
T ss_pred cEEEEecccccCCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCCCcCCCChhhhhccCh-HHH
Confidence 455543 26789999999996 7999999999999999999999999999999998 69999999998754211 111
Q ss_pred cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHH
Q 004918 80 SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 80 ~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
..+....++++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|
T Consensus 88 ~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~~~A 166 (272)
T 1hzd_A 88 GPFVSKIRAVI-NDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGGTQRLPRAIGMSLA 166 (272)
T ss_dssp HHHHHHHHHHH-HHHHTCSSCEEEEESEEEETHHHHHHHHSSEEEEETTCEEECCGGGGTCCCCSSHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHH-HHHHhCCCCEEEEeCceEEecHHHHHHhCCEEEEcCCCEEeCchhccCCCCCchHHHHHHHHhCHHHH
Confidence 11222344555 67999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchH----HHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHH
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEEL----LKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAK 235 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l----~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (724)
++|++||++++|+||+++||||+|+|++++ .+.+.+++++++..+|.++
T Consensus 167 ~~l~ltg~~~~a~eA~~~GLv~~vv~~~~l~~~~~~~a~~~a~~la~~~p~a~--------------------------- 219 (272)
T 1hzd_A 167 KELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKALDLAREFLPQGPVAM--------------------------- 219 (272)
T ss_dssp HHHHHHTCEEEHHHHHHHTSCSEEECCCTTSCHHHHHHHHHHHTTTTSCHHHH---------------------------
T ss_pred HHHHHcCCcCCHHHHHHCCCcceecChhhhhHHHHHHHHHHHHHHHhCCHHHH---------------------------
Confidence 999999999999999999999999998875 4567777777777665432
Q ss_pred HhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcC
Q 004918 236 KTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSK 294 (724)
Q Consensus 236 ~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~ 294 (724)
..+|++++.+...+++++++.|.+.+..++.|+|++|++++|++||+|..
T Consensus 220 ---------~~~K~~l~~~~~~~~~~~l~~e~~~~~~~~~s~d~~egi~af~ekr~p~~ 269 (272)
T 1hzd_A 220 ---------RVAKLAINQGMEVDLVTGLAIEEACYAQTIPTKDRLEGLLAFKEKRPPRY 269 (272)
T ss_dssp ---------HHHHHHHHHHHTSCHHHHHHHHHHHHHTTTTCHHHHHHHHHHTTTSCCCC
T ss_pred ---------HHHHHHHHHHhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHhcCCCCCC
Confidence 24577888888889999999999999999999999999999999998775
No 71
>3bpt_A 3-hydroxyisobutyryl-COA hydrolase; coenzyme A, beta-hydroxyisobutyryl acid, querceti structural genomics consortium, SGC; HET: QUE; 1.50A {Homo sapiens}
Probab=100.00 E-value=1e-46 Score=406.07 Aligned_cols=289 Identities=23% Similarity=0.310 Sum_probs=224.2
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCCCc--
Q 004918 3 APRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGAGD-- 78 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~-- 78 (724)
.+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++........
T Consensus 5 ~~~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~al~~~~~d~~vr~vVltG~g~~~FcaG~Dl~~~~~~~~~~~~~ 83 (363)
T 3bpt_A 5 AEEVLLGK-KGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEAEKAKQKI 83 (363)
T ss_dssp CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEETTSSEEECCBCHHHHHHHHTSSCCC
T ss_pred CcceEEEE-ECCEEEEEEcCCCcCCCCCHHHHHHHHHHHHHHHhCCCeEEEEEECCCCCcccCCcCHHHHHhhcccccHH
Confidence 35688888 7899999999995 7999999999999999999999999999999998 89999999998864321111
Q ss_pred ccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHH
Q 004918 79 VSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSK 158 (724)
Q Consensus 79 ~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~ 158 (724)
...+.....+++ ..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|. +
T Consensus 84 ~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~r~~g~-~ 161 (363)
T 3bpt_A 84 APVFFREEYMLN-NAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGK-L 161 (363)
T ss_dssp HHHHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHTTTTSSEEEECTTCEEECCGGGTTSCCCTTHHHHHHHSSTT-H
T ss_pred HHHHHHHHHHHH-HHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEEcCCeEEeCCccccCCCCCchHHHHHHHhhHH-H
Confidence 111112223445 67899999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhcc------------CCC---------
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRT------------DKL--------- 217 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~------------~~~--------- 217 (724)
|++|++||++|+|+||+++||||+|||++++.+.+.++++ +...++..+....+. ..+
T Consensus 162 a~~l~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~~~~l~~-l~~~~~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~ 240 (363)
T 3bpt_A 162 GYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLA-LKSPSKENIASVLENYHTESKIDRDKSFILEEHMDKINS 240 (363)
T ss_dssp HHHHHHHCCCEETHHHHHTTSCSEECCGGGHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHCCTTTTCCCTTGGGHHHHHH
T ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCHHHHHHHHHHHHh-cccCCHHHHHHHHHHHHhhhcccCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999999998776554432 111111111110000 000
Q ss_pred ----CCcHHHHHHH-----HHHHHHHHHhCCCCh-hHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004918 218 ----GSLSEAREVL-----KLARLQAKKTAPNMP-QHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (724)
Q Consensus 218 ----~~~~~~~~~~-----~~~~~~~~~~~~~~~-a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~ 287 (724)
+........+ ..+....++...+-| +...+|++++.+...+++++++.|.+.+..++.|+|++|++++|+
T Consensus 241 ~f~~~~~~ei~~al~~~~~~~a~~~a~~la~~sP~al~~~k~~l~~~~~~~l~~~l~~E~~~~~~~~~s~D~~EGv~Afl 320 (363)
T 3bpt_A 241 CFSANTVEEIIENLQQDGSSFALEQLKVINKMSPTSLKITLRQLMEGSSKTLQEVLTMEYRLSQACMRGHDFHEGVRAVL 320 (363)
T ss_dssp HTTSSSHHHHHHHHHHHCCHHHHHHHHHHTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHTSSHHHHHHHHHT
T ss_pred HhCCCCHHHHHHHHhccChHHHHHHHHHHHhCCchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCccHHhhhhhee
Confidence 0000000001 011123344444455 566789999999999999999999999999999999999999999
Q ss_pred -Hh-hhhcCC
Q 004918 288 -AQ-RATSKV 295 (724)
Q Consensus 288 -~~-r~~~~~ 295 (724)
+| |+|++.
T Consensus 321 ~eK~r~P~~~ 330 (363)
T 3bpt_A 321 IDKDQSPKWK 330 (363)
T ss_dssp TSCCCCCCCS
T ss_pred eCCCCCCCCC
Confidence 77 777654
No 72
>3isa_A Putative enoyl-COA hydratase/isomerase; structural genomics, PSI-2, protein structure initiative, EN hydratase; 1.76A {Bordetella parapertussis}
Probab=100.00 E-value=4.7e-47 Score=389.74 Aligned_cols=242 Identities=19% Similarity=0.299 Sum_probs=203.7
Q ss_pred cEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccc
Q 004918 5 RVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (724)
Q Consensus 5 ~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (724)
.|.++. +++|++||||||+ .|++|.+|+++|.++++.+++ +++|+|||||.|++||+|+|++++....... .....
T Consensus 8 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~-~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~~~~~ 84 (254)
T 3isa_A 8 PLAIER-RPAAWTFTLSRPEKRNALSAELVEALIDGVDAAHR-EQVPLLVFAGAGRNFSAGFDFTDYETQSEGD-LLLRM 84 (254)
T ss_dssp SEEEEE-CSSEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHH-TTCSEEEEEESTTCSCCCBCCTTCTTSCHHH-HHHHH
T ss_pred eEEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHhhc-CCcEEEEEECCCCceeeCcChHHhhccCchh-HHHHH
Confidence 388998 8999999999995 899999999999999999987 5899999999999999999999986432111 11111
Q ss_pred hhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHH
Q 004918 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM 163 (724)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ 163 (724)
...+.++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++++|++++|..+|++|+
T Consensus 85 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p---g~~~l~~~vG~~~A~~l~ 160 (254)
T 3isa_A 85 VRIEMLL-QRVAGSPSLTLALAHGRNFGAGVDLFAACKWRYCTPEAGFRMPGLKFGLVL---GTRRFRDIVGADQALSIL 160 (254)
T ss_dssp HHHHHHH-HHHHTCSSEEEEEECSEEETHHHHHHHHSSEEEECTTCEEECCGGGGTCCC---SHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHH-HHHHhCCCCEEEEECCeEeecchhHHHhCCEEEEcCCCEEECchhccCccH---HHHHHHHHcCHHHHHHHH
Confidence 2234455 679999999999999999999999999999999999999999999999998 479999999999999999
Q ss_pred HcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChh
Q 004918 164 LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQ 243 (724)
Q Consensus 164 ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 243 (724)
+||++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 161 ltg~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~---------------------------------- 206 (254)
T 3isa_A 161 GSARAFDADEARRIGFVRDCAAQAQWPALIDAAAEAATALDPATRA---------------------------------- 206 (254)
T ss_dssp TTTCEEEHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTSCHHHHH----------------------------------
T ss_pred HhCCCCcHHHHHHCCCccEEeChhHHHHHHHHHHHHHHcCCHHHHH----------------------------------
Confidence 9999999999999999999999999999999999999998875443
Q ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCCC
Q 004918 244 HQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKVP 296 (724)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~~ 296 (724)
.+|+.+. .+.++.|.+.+..++.|+|++|++.+|++||+|.+.+
T Consensus 207 --~~K~~l~-------~~~~~~e~~~~~~~~~s~d~~egi~af~ekr~p~~~~ 250 (254)
T 3isa_A 207 --TLHRVLR-------DDHDDADLAALARSAAQPGFKARIRDYLAQPAAEGHH 250 (254)
T ss_dssp --HHHHHHS-------CCCHHHHHHHHHHHHHSTTHHHHHHHHHHC-------
T ss_pred --HHHHHHh-------hhhHHHHHHHHHHHhCCHHHHHHHHHHHhcCCCCCCC
Confidence 2333442 1234567888999999999999999999999999865
No 73
>2q35_A CURF; crotonase, lyase; 1.65A {Lyngbya majuscula} PDB: 2q34_A 2q2x_A
Probab=100.00 E-value=4e-47 Score=387.66 Aligned_cols=237 Identities=23% Similarity=0.300 Sum_probs=212.1
Q ss_pred EEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchh
Q 004918 7 TMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDV 85 (724)
Q Consensus 7 ~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~ 85 (724)
.++. +++|++||||||+ .|++|.+|+++|.+++++++.|+++|+|||||.|++||+|+|++++....... . ..
T Consensus 6 ~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~~~~~-~-~~--- 79 (243)
T 2q35_A 6 LTEL-GNGVVQITMKDESSRNGFSPSIVEGLRHCFSVVAQNQQYKVVILTGYGNYFSSGASKEFLIRKTRGE-V-EV--- 79 (243)
T ss_dssp EEEE-ETTEEEEEECCGGGTSBSCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECBSCHHHHHHHHTTC-C-CC---
T ss_pred EEEe-eCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCeeCCCChHHHhhccchh-h-HH---
Confidence 3555 7899999999995 89999999999999999999999999999999999999999999886532111 1 11
Q ss_pred HHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHc
Q 004918 86 SVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLL 165 (724)
Q Consensus 86 ~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~lt 165 (724)
++++ ..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|++|++|
T Consensus 80 -~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~~a~~l~lt 157 (243)
T 2q35_A 80 -LDLS-GLILDCEIPIIAAMQGHSFGGGLLLGLYADFVVFSQESVYATNFMKYGFTPVGATSLILREKLGSELAQEMIYT 157 (243)
T ss_dssp -CCCH-HHHHTCCSCEEEEECSEEETHHHHHHHTSSEEEEESSSEEECCHHHHTSCCCSSHHHHHHHHHCHHHHHHHHHH
T ss_pred -HHHH-HHHHhCCCCEEEEEcCccccchHHHHHhCCEEEEeCCCEEECCccccCCCCcchHHHHHHHHhCHHHHHHHHHc
Confidence 2344 56889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCChhHH
Q 004918 166 SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPQHQ 245 (724)
Q Consensus 166 g~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 245 (724)
|++++|+||+++||||+|+|++++.+++.++++++++.++.+++
T Consensus 158 g~~~~a~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------------ 201 (243)
T 2q35_A 158 GENYRGKELAERGIPFPVVSRQDVLNYAQQLGQKIAKSPRLSLV------------------------------------ 201 (243)
T ss_dssp CCCEEHHHHHHTTCSSCEECHHHHHHHHHHHHHHHTTSCHHHHH------------------------------------
T ss_pred CCCCCHHHHHHcCCCCEecChhHHHHHHHHHHHHHHhCCHHHHH------------------------------------
Confidence 99999999999999999999999999999999999998875433
Q ss_pred HHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Q 004918 246 ACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFF 287 (724)
Q Consensus 246 ~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~ 287 (724)
.+|+.++.....+++++++.|.+.+..++.|+|++|++++|+
T Consensus 202 ~~K~~l~~~~~~~~~~~~~~e~~~~~~~~~s~d~~eg~~a~~ 243 (243)
T 2q35_A 202 ALKQHLSADIKAKFPEAIKKELEIHQVTFNQPEIASRIQQEF 243 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSTTHHHHHHTTC
T ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHHHhCCHHHHHHHhhcC
Confidence 346677776666788999999999999999999999999874
No 74
>3ju1_A Enoyl-COA hydratase/isomerase family protein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 2.30A {Shewanella oneidensis}
Probab=100.00 E-value=6.2e-47 Score=411.59 Aligned_cols=286 Identities=17% Similarity=0.232 Sum_probs=222.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCC-CCccCCCCchhhhhccCC-----
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNG-GRFSGGFDINVFQKVHGA----- 76 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~----- 76 (724)
+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++......
T Consensus 42 ~~v~~~~-~~~V~~ItLnrP~~~NAl~~~m~~~L~~al~~~~~d~~vr~vVltG~G~~~FcaG~Dl~~~~~~~~~~~~~~ 120 (407)
T 3ju1_A 42 QTLATAS-GKLVGVVTLNVEKALNALDLDMVRAMTVQLNLWKKDPLIACVVLDGSGEKAFCAGGDVRALYHASVAAKGQV 120 (407)
T ss_dssp EEEECTT-SCEEEEEEECCGGGTSCBCHHHHHHHHHHHHHHHHCTTEEEEEEEESSSSEEECCBCCHHHHHHHHHHTSSC
T ss_pred ceEEEEE-ECCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEecCCCCcccCCCChhhhhhccccccccc
Confidence 3466666 7899999999996 7999999999999999999999999999999999 799999999998653210
Q ss_pred -CcccccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccccc
Q 004918 77 -GDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (724)
Q Consensus 77 -~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G 155 (724)
.....+......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|
T Consensus 121 ~~~~~~~~~~~~~l~-~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~G~t~~L~rl~g 199 (407)
T 3ju1_A 121 TEVAKVFFEEEYRLD-YLLHTYGKPVLVWGDGIVMGGGLGLMAGASHKVVTETSRIAMPEVTIGLYPDVGGSYFLNRMPG 199 (407)
T ss_dssp CHHHHHHHHHHHHHH-HHHHTCSSCEEEECCSEEETHHHHHHHHCSEEEECTTCEEECGGGGGTCCSCTTHHHHTTTSST
T ss_pred HHHHHHHHHHHHHHH-HHHHHCCCCEEEEECCccccCcchHHhcCCEEEEcCCCEEeChHhhcCCCCCchHHHHHhhhhH
Confidence 11112222233455 6799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHH---H----------------HHHHHHHHHccCc-----------
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLK---V----------------SRLWALDIAARRK----------- 205 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~---~----------------a~~~a~~la~~~~----------- 205 (724)
.+|++|++||++|+|+||+++||||+|||++++.+ + +.++++++.....
T Consensus 200 -~~A~~l~ltG~~i~A~eA~~~GLv~~vv~~~~l~~~~~~L~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~l~~~ 278 (407)
T 3ju1_A 200 -KMGLFLGLTAYHMNAADACYVGLADHYLNRDDKELMFDAMATLDWSDSPALNHQRLDTMINELSNQVDIPKGDSVLAES 278 (407)
T ss_dssp -THHHHHHHHCCCBCHHHHHHHTSCSEECCGGGHHHHHHHHHSSCCCSCHHHHHHHHHHHHHHHHTTCSSCCCCCHHHHT
T ss_pred -HHHHHHHHcCCcCcHHHHHHCCCccEEcCHHHHHHHHHHHhcccccccccchhHHHHHHHHHhhhhccccCCchhHHHH
Confidence 99999999999999999999999999999999887 3 3333333322110
Q ss_pred -hhhhhhhccCCCCCcHHHHHHH-------HHHHHHHHHh-CCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCC
Q 004918 206 -PWIRSLHRTDKLGSLSEAREVL-------KLARLQAKKT-APNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVML 276 (724)
Q Consensus 206 -~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s 276 (724)
.++..... .++......+ ..+....++. .+.-.+...+|+.++.+...+++++++.|.+.+..++.+
T Consensus 279 ~~~I~~~f~----~sv~~i~~~L~~~~~~~~~a~~~a~~la~~sP~sl~~tk~~l~~~~~~~l~~~l~~E~~~~~~~~~s 354 (407)
T 3ju1_A 279 QEMIDRLMA----GSLTDIVTRMSTLSTDEAWLSKACATMLAGSPISWHLAYIQTQLGTKLSLAQCFKWELTVSVNVCAK 354 (407)
T ss_dssp HHHHHHHTC----SCHHHHHHHHHHCCCSCHHHHHHHHHHHHSCHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----CCHHHHHHHHHhcccccHHHHHHHHHHHhCCHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHhCC
Confidence 00111100 1111110000 0111111211 122346777899999999999999999999999999999
Q ss_pred HHHHHHHHHHH-Hh-hhhcCCC
Q 004918 277 DTSRGLVHVFF-AQ-RATSKVP 296 (724)
Q Consensus 277 ~~~~~~~~af~-~~-r~~~~~~ 296 (724)
+|++|++++|+ +| |+|++.+
T Consensus 355 ~D~~EGvrAflidKdr~P~w~~ 376 (407)
T 3ju1_A 355 GDFCEGVRALLIDKDKQPKWQF 376 (407)
T ss_dssp SSHHHHHHHHTTSCCCCCCCSS
T ss_pred HHHHHHHHHHHhcCCcCCCCCC
Confidence 99999999999 87 8877755
No 75
>1pjh_A Enoyl-COA isomerase; ECI1P; beta-BETA-alpha spiral fold, inter-trimer contacts; 2.10A {Saccharomyces cerevisiae} SCOP: c.14.1.3 PDB: 1hno_A 1k39_A* 1hnu_A
Probab=100.00 E-value=1.8e-46 Score=391.36 Aligned_cols=243 Identities=19% Similarity=0.180 Sum_probs=203.7
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCc-
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGD- 78 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~- 78 (724)
|+|+.+.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++........
T Consensus 6 m~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~ 84 (280)
T 1pjh_A 6 RQNEKISYRI-EGPFFIIHLINPDNLNALEGEDYIYLGELLELADRNRDVYFTIIQSSGRFFSSGADFKGIAKAQGDDTN 84 (280)
T ss_dssp CCBTTEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCCBCHHHHHC-------
T ss_pred ccCCceEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCCCCccCCcCHHHHhhccccccc
Confidence 5677899999 7899999999995 899999999999999999999999999999999999999999998754211110
Q ss_pred --cc---ccc----hhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEe-CCceeeCcccccCccCCcchhh
Q 004918 79 --VS---LMP----DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAA-PKTQLGLPELTLGVIPGFGGTQ 148 (724)
Q Consensus 79 --~~---~~~----~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~-~~a~f~~pe~~~G~~P~~g~~~ 148 (724)
.. .+. ...+.++ ..|.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~~ia~~~~a~f~~pe~~lGl~p~~g~~~ 163 (280)
T 1pjh_A 85 KYPSETSKWVSNFVARNVYVT-DAFIKHSKVLICCLNGPAIGLSAALVALCDIVYSINDKVYLLYPFANLGLITEGGTTV 163 (280)
T ss_dssp CCSSHHHHHHHHTHHHHHHHH-HHHHHCCSEEEEEECSCEEHHHHHHHHHSSEEEESSTTCEEECCHHHHTCCCCTTHHH
T ss_pred chhhhHHHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeeeeHHHHHHHHCCEEEEeCCCCEEeCchhhcCCCCCccHHH
Confidence 00 011 1113455 66899999999999999999999999999999999 9999999999999999999999
Q ss_pred hhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcc-----hHHHHHH-HHHHHHHccCchhhhhhhccCCCCCcHH
Q 004918 149 RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSE-----ELLKVSR-LWALDIAARRKPWIRSLHRTDKLGSLSE 222 (724)
Q Consensus 149 ~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~-----~l~~~a~-~~a~~la~~~~~~~~~~~~~~~~~~~~~ 222 (724)
+|+|++|..+|++|++||++++|+||+++||||+|||++ ++.+++. ++++++++.|+.+++
T Consensus 164 ~l~r~vG~~~A~~llltg~~~~a~eA~~~GLv~~vv~~~~~~~~~l~~~a~~~~a~~la~~~~~a~~------------- 230 (280)
T 1pjh_A 164 SLPLKFGTNTTYECLMFNKPFKYDIMCENGFISKNFNMPSSNAEAFNAKVLEELREKVKGLYLPSCL------------- 230 (280)
T ss_dssp HHHHHHCHHHHHHHHHTTCCEEHHHHHHTTCCSEECCCCTTCHHHHHHHHHHHHHHHHTTCCHHHHH-------------
T ss_pred HHHHHhCHHHHHHHHHhCCCCCHHHHHHCCCcceeeCCccccHHHHHHHHHHHHHHHHHcCCHHHHH-------------
Confidence 999999999999999999999999999999999999985 7888885 999999998875443
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Q 004918 223 AREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATS 293 (724)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~ 293 (724)
.+|++++... ...++ ...++|+++++.+|+++|++.
T Consensus 231 -----------------------~~K~~l~~~~----~~~l~--------~~~~~d~~e~~~af~~kr~~e 266 (280)
T 1pjh_A 231 -----------------------GMKKLLKSNH----IDAFN--------KANSVEVNESLKYWVDGEPLK 266 (280)
T ss_dssp -----------------------HHHHHHHTTT----HHHHH--------HHHHHHHHHHHHHHHHTHHHH
T ss_pred -----------------------HHHHHHHHhH----HHHHH--------HhhhHHHHHHHHHHhCCccHH
Confidence 3445555433 22222 124889999999999999884
No 76
>3r6h_A Enoyl-COA hydratase, ECHA3; ssgcid, mycobacerium marinum, structura genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium marinum M} PDB: 4hc8_A*
Probab=100.00 E-value=6.5e-46 Score=376.31 Aligned_cols=230 Identities=23% Similarity=0.256 Sum_probs=201.2
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
|+ +.|.++. +++|++||||||+.|++|.+|+++|.++++++++| ++|+|||||.|++||+|+|++++.... .....
T Consensus 3 M~-~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d-~vr~vvltg~g~~F~aG~Dl~~~~~~~-~~~~~ 78 (233)
T 3r6h_A 3 MS-GPVTYTH-DDAIGVIRMDDGKVNVLGPTMQQALNEAIDAADRD-NVGALVIAGNHRVFSGGFDLKVLTSGE-AKPAI 78 (233)
T ss_dssp ---CCEEEEE-ETTEEEEEECCSSSCCCSHHHHHHHHHHHHHHHHH-TCSEEEEECCSSEEECCSCHHHHC----CHHHH
T ss_pred CC-CceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHhC-CCeEEEEECCCCCccCCcChHHHhccC-hHHHH
Confidence 55 5688999 78999999999989999999999999999999987 699999999999999999999986532 11122
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHH
Q 004918 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAI 160 (724)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~ 160 (724)
.+....++++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|..+|+
T Consensus 79 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~~g~~~l~~~~g~~~a~ 157 (233)
T 3r6h_A 79 DMLRGGFELS-YRLLSYPKPVVIACTGHAIAMGAFLLCSGDHRVAAHAYNVQANEVAIGMTIPYAAMEVLKLRLTPSAYQ 157 (233)
T ss_dssp HHHHHHHHHH-HHHHTCSSCEEEEECSEEETHHHHHHTTSSEEEECTTCCEECCGGGGTCCCCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcchHHHHHHHHhCCEEEEeCCcEEECchhhhCCCCCccHHHHHHHHhCHHHHH
Confidence 2333444556 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCC
Q 004918 161 EMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPN 240 (724)
Q Consensus 161 ~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (724)
+|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 158 ~l~ltg~~~~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------- 206 (233)
T 3r6h_A 158 QAAGLAKTFFGETALAAGFIDEISLPEVVLSRAEEAAREFAGLNQQAHN------------------------------- 206 (233)
T ss_dssp HHHHSCCEECHHHHHHHTSCSEECCGGGHHHHHHHHHHHHHTSCHHHHH-------------------------------
T ss_pred HHHHcCCcCCHHHHHHcCCCcEeeCHHHHHHHHHHHHHHHHcCCHHHHH-------------------------------
Confidence 9999999999999999999999999999999999999999999875443
Q ss_pred ChhHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 004918 241 MPQHQACLDVIEEGIVHGGYSGVLKEAKVFK 271 (724)
Q Consensus 241 ~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~ 271 (724)
.+|++++.....+++++++.|.+.|.
T Consensus 207 -----~~K~~l~~~~~~~l~~~l~~e~~~f~ 232 (233)
T 3r6h_A 207 -----ATKLRARAEALKAIRAGIDGIEAEFG 232 (233)
T ss_dssp -----HHHHHTTHHHHHHHHHHHHTSHHHHC
T ss_pred -----HHHHHHHHHHHhHHHHHHHHHHHHhC
Confidence 45667777777788999999888764
No 77
>2j5g_A ALR4455 protein; enzyme evolution, C-C bond hydrolase, hydrolase, lyase, crotonase, biocatalysis, beta-diketone; 1.46A {Anabaena SP} PDB: 2j5s_A* 2j5g_D
Probab=100.00 E-value=8.7e-46 Score=381.12 Aligned_cols=238 Identities=16% Similarity=0.214 Sum_probs=204.2
Q ss_pred CCcEEEEEecC-cEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccc
Q 004918 3 APRVTMEVGND-GVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVS 80 (724)
Q Consensus 3 ~~~v~~~~~~~-~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~ 80 (724)
++.|.++. ++ +|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++..........
T Consensus 22 ~~~i~~~~-~~~~Va~ItLnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~FcaG~Dl~~~~~~~~~~~~~ 100 (263)
T 2j5g_A 22 YENLHFHR-DENGILEVRMHTNGSSLVFTGKTHREFPDAFYDISRDRDNRVVILTGSGDAWMAEIDFPSLGDVTNPREWD 100 (263)
T ss_dssp CTTEEEEE-CTTCEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTEEECEECSGGGCCTTSHHHHH
T ss_pred CCeEEEEE-cCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCCCCcccCcCHHHHhccCCHHHHH
Confidence 55688998 67 99999999995 79999999999999999999999999999999999999999999875421111111
Q ss_pred ccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeC-cccccCccCCcchhhhhcccccHHHH
Q 004918 81 LMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKA 159 (724)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~-pe~~~G~~P~~g~~~~l~r~~G~~~a 159 (724)
.+.....+++ .++.++||||||+|||+|+ ||++|+++||+|||+++++|++ ||+++|++|++|++++|+|++|..+|
T Consensus 101 ~~~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~L~r~vG~~~A 178 (263)
T 2j5g_A 101 KTYWEGKKVL-QNLLDIEVPVISAVNGAAL-LHSEYILTTDIILASENTVFQDMPHLNAGIVPGDGVHILWPLALGLYRG 178 (263)
T ss_dssp HHHHHHHHHH-HHHHTCCSCEEEEECSEEC-SCGGGGGGCSEEEEETTCEECCCHHHHHTCCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHhCCCCEEEEECCcch-HHHHHHHhCCEEEEcCCCEEecCcccccccCCCccHHHHHHHHcCHHHH
Confidence 1222234555 6689999999999999999 5999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCC
Q 004918 160 IEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAP 239 (724)
Q Consensus 160 ~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (724)
++|++||++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 179 ~~llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~------------------------------ 228 (263)
T 2j5g_A 179 RYFLFTQEKLTAQQAYELNVVHEVLPQSKLMERAWEIARTLAKQPTLNLR------------------------------ 228 (263)
T ss_dssp HHHHHTTCCEEHHHHHHTTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH------------------------------
T ss_pred HHHHHcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHhCCHHHHH------------------------------
Confidence 99999999999999999999999999999999999999999998875443
Q ss_pred CChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhh
Q 004918 240 NMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQR 290 (724)
Q Consensus 240 ~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r 290 (724)
.+|++++.....+++++++.| ...|++++|++||
T Consensus 229 ------~~K~~l~~~~~~~l~~~l~~e-----------~~~eg~~af~~~~ 262 (263)
T 2j5g_A 229 ------YTRVALTQRLKRLVNEGIGYG-----------LALEGITATDLRN 262 (263)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHHTTC
T ss_pred ------HHHHHHHhhhhccHHHHHHHH-----------HHHhhHHHHHhcc
Confidence 345666665555566666554 4559999999987
No 78
>3ot6_A Enoyl-COA hydratase/isomerase family protein; structural genomics, PSI-2, protein structure initiative; 2.50A {Pseudomonas syringae PV}
Probab=100.00 E-value=1.4e-45 Score=373.63 Aligned_cols=225 Identities=21% Similarity=0.288 Sum_probs=199.4
Q ss_pred CcEEEEEecCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccc
Q 004918 4 PRVTMEVGNDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (724)
+.|.++. +++|++||||||+.|++|.+|+++|.+++++++.| +|+|||||.|++||+|+|++++... ......+.
T Consensus 6 ~~v~~~~-~~~v~~itlnrp~~Nal~~~~~~~L~~al~~~~~d--~~~vvltg~g~~F~aG~Dl~~~~~~--~~~~~~~~ 80 (232)
T 3ot6_A 6 DLVSYHL-DDGVATLTLNNGKVNAISPDVIIAFNAALDQAEKD--RAIVIVTGQPGILSGGYDLKVMTSS--AEAAINLV 80 (232)
T ss_dssp HHEEEEE-ETTEEEEEECCTTTTCBCHHHHHHHHHHHHHHHHT--TCEEEEECBTEEEECCBCHHHHHHC--HHHHHHHH
T ss_pred cceEEEE-ECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHhcC--CCEEEEECCCCCccCCcCHHHHhhC--hHHHHHHH
Confidence 3588888 79999999999989999999999999999999976 4999999999999999999998652 11122233
Q ss_pred hhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHHHHHH
Q 004918 84 DVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEM 162 (724)
Q Consensus 84 ~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l 162 (724)
...++++ ++|.++||||||+|||+|+|||++|+++||+|||+++ ++|++||+++|++|++++++++++++|..+|++|
T Consensus 81 ~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~~~g~~~l~~~ig~~~a~~l 159 (232)
T 3ot6_A 81 AQGSTLA-RRMLSHPFPIIVACPGHAVAKGAFLLLSADYRIGVAGPFSIGLNEVQIGMTMHHAGIELARDRLRKSAFNRS 159 (232)
T ss_dssp HHHHHHH-HHHHTCSSCEEEECCEEEETHHHHHHTTSSEEEEECSSCCEECCTTTTTCCCCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHH-HHHHcCCCCEEEEECCEeehHHHHHHHHCCEEEEeCCCcEEECcccccCCCCchhHHHHHHHHhCHHHHHHH
Confidence 3445566 6799999999999999999999999999999999998 8999999999999888889999999999999999
Q ss_pred HHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCCh
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMP 242 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (724)
++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 160 ~ltg~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~--------------------------------- 206 (232)
T 3ot6_A 160 VINAEMFDPEGAMAAGFLDKVVSVEELQGAALAVAAQLKKINMNAHK--------------------------------- 206 (232)
T ss_dssp HTSCCEECHHHHHHHTSCSEEECTTTHHHHHHHHHHHHTTSCHHHHH---------------------------------
T ss_pred HHcCCccCHHHHHHCCCCCEecCHHHHHHHHHHHHHHHHcCCHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999998875443
Q ss_pred hHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 004918 243 QHQACLDVIEEGIVHGGYSGVLKEAKVF 270 (724)
Q Consensus 243 a~~~~~~~~~~~~~~~~~~~l~~E~~~~ 270 (724)
.+|++++.....+++++++.|.+.|
T Consensus 207 ---~~K~~l~~~~~~~l~~~l~~E~~~~ 231 (232)
T 3ot6_A 207 ---KTKLKVRKGLLDTLDAAIEQDRQHM 231 (232)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHhHhHHHHHHHHHHHhc
Confidence 4567788887788999999998764
No 79
>3m6n_A RPFF protein; enoyl-COA hydratase, lyase; 1.80A {Xanthomonas campestris PV} PDB: 3m6m_A
Probab=100.00 E-value=2.4e-44 Score=378.66 Aligned_cols=255 Identities=18% Similarity=0.188 Sum_probs=215.1
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC-----CCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEcCCCCccCCCCchhhh
Q 004918 3 APRVTMEVG-NDGVAIITLINPP-----VNALAIPIVAGLKDKFEEATS-----RDDVKAIVLTGNGGRFSGGFDINVFQ 71 (724)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~-----~Nal~~~~~~~l~~~l~~~~~-----d~~v~~vVl~g~g~~F~aG~Dl~~~~ 71 (724)
|+++.+..+ +++|++||||||+ +|+||.+|+++|.++++.++. |+++|+|||||.|++||+|+|++++.
T Consensus 29 y~~i~v~~~~~~~V~~itLnrp~k~n~~rpal~~~m~~eL~~al~~~~~d~~~~d~~vr~vVltg~G~~FcaG~Dl~~~~ 108 (305)
T 3m6n_A 29 GSTLRIIEEPQRDVYWIHMHADLAINPGRACFSTRLVDDITGYQTNLGQRLNTAGVLAPHVVLASDSDVFNLGGDLALFC 108 (305)
T ss_dssp CTTEEEEEETTTTEEEEEECTTC-----CCSBCHHHHHHHHHHHHHHHHHHHHHTCSSCEEEEEESSSSSBCCBCHHHHH
T ss_pred CceEEEEEEEECCEEEEEECCccccCCCCCCCCHHHHHHHHHHHHHHHhcccccCCCeEEEEEECCCCCeecCcCHHHHH
Confidence 456666443 7899999999984 459999999999999999987 58999999999999999999999986
Q ss_pred hccCCCccc---ccchhHHHHHHHHH---hcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcc
Q 004918 72 KVHGAGDVS---LMPDVSVELVVNLI---EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFG 145 (724)
Q Consensus 72 ~~~~~~~~~---~~~~~~~~~~~~~l---~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g 145 (724)
......... .+.......+ ..+ ..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~g 187 (305)
T 3m6n_A 109 QLIREGDRARLLDYAQRCVRGV-HAFHVGLGARAHSIALVQGNALGGGFEAALSCHTIIAEEGVMMGLPEVLFDLFPGMG 187 (305)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHH-HHHHTGGGTTCEEEEEECSCEETHHHHHHHHSSEEEEETTCEEECGGGGGTCCCCSS
T ss_pred hccccccHHHHHHHHHHHHHHH-HHHHHhcCCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEECchhccCcCCCcc
Confidence 532111111 1111222223 223 468999999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHH
Q 004918 146 GTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEARE 225 (724)
Q Consensus 146 ~~~~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~ 225 (724)
++++|+|++|..+|++|++||++|+|+||+++||||+|||++++++++.++|++|++ +|.++
T Consensus 188 ~~~~L~r~vG~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~-~p~a~----------------- 249 (305)
T 3m6n_A 188 AYSFMCQRISAHLAQKIMLEGNLYSAEQLLGMGLVDRVVPRGQGVAAVEQVIRESKR-TPHAW----------------- 249 (305)
T ss_dssp HHHHHTTTSCHHHHHHHHHHCCEEEHHHHHHHTSCSEEECTTCHHHHHHHHHHHHTT-CHHHH-----------------
T ss_pred HHHHHHHHhcHHHHHHHHHcCCCCCHHHHHHCCCCCEecChhHHHHHHHHHHHHHhh-ChHHH-----------------
Confidence 999999999999999999999999999999999999999999999999999999985 54322
Q ss_pred HHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhhcCC
Q 004918 226 VLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRATSKV 295 (724)
Q Consensus 226 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~~~~ 295 (724)
..+|++++.....+++++++.|.+.+..++.|+|....+..++.+++.++.
T Consensus 250 -------------------~~~K~~l~~~~~~~l~~~l~~e~~~~~~~~~s~d~~~~~m~~l~~~q~~~~ 300 (305)
T 3m6n_A 250 -------------------AAMQQVREMTTAVPLEEMMRITEIWVDTAMQLGEKSLRTMDRLVRAQSRRS 300 (305)
T ss_dssp -------------------HHHHHHHHTTTCCCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHC---
T ss_pred -------------------HHHHHHHHhhhcCCHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHhhcc
Confidence 256788899999999999999999999999999998888877776665543
No 80
>3njd_A Enoyl-COA hydratase; ssgcid, mycobacerium smegmatis, structu genomics, seattle structural genomics center for infectious lyase; 1.75A {Mycobacterium smegmatis} PDB: 3njb_A
Probab=100.00 E-value=1.4e-43 Score=377.52 Aligned_cols=204 Identities=25% Similarity=0.334 Sum_probs=174.0
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (724)
|.|++|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 32 ~~~~~i~~e~-~~~Va~ItLnrP~~~NAl~~~m~~eL~~al~~~~~d~~vrvvVltG~G~~FcaG~Dl~~~~~~~~~~~~ 110 (333)
T 3njd_A 32 DNLKTMTYEV-TDRVARITFNRPEKGNAIVADTPLELSALVERADLDPDVHVILVSGRGEGFCAGFDLSAYAEGSSSAGG 110 (333)
T ss_dssp TSCSSEEEEE-ETTEEEEEECCGGGTTCBCTHHHHHHHHHHHHHHHCTTCCEEEEEESTTSSBCCBC-------------
T ss_pred CCCCeEEEEE-ECCEEEEEeCCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCCCceecCcCHHHHhhccccccc
Confidence 3567899999 8999999999995 7999999999999999999999999999999999999999999998653211100
Q ss_pred -----------------------------cccchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCce
Q 004918 80 -----------------------------SLMPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQ 130 (724)
Q Consensus 80 -----------------------------~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~ 130 (724)
..+......++ ..|.++||||||+|||+|+|||++|+++||+|||+++++
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~kPvIAaV~G~a~GgG~~LalacD~rias~~a~ 189 (333)
T 3njd_A 111 GSPYEGTVLSGKTQALNHLPDEPWDPMVDYQMMSRFVRGF-ASLMHCDKPTVVKIHGYCVAGGTDIALHADQVIAAADAK 189 (333)
T ss_dssp --CCTTSTTCHHHHHHTTCSSSCCCHHHHHHHHHHHHHHH-THHHHSSSCEEEEECSEEETHHHHHHTTSSEEEECTTCE
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHHHHH-HHHHhCCCCEEEEECCEEeHHHHHHHHhCCEEEECCCCe
Confidence 00112223344 568899999999999999999999999999999999999
Q ss_pred eeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhh
Q 004918 131 LGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (724)
Q Consensus 131 f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (724)
|++||+++|++|++| +|++++|..+|++|++||++|+|+||+++||||+|||++++.+++.++|++|++.|+.+++
T Consensus 190 f~~pe~~lG~~P~~g---~l~~~vG~~~A~ellltG~~i~A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ia~~~~~al~ 265 (333)
T 3njd_A 190 IGYPPMRVWGVPAAG---LWAHRLGDQRAKRLLFTGDCITGAQAAEWGLAVEAPDPADLDARTERLVERIAAMPVNQLI 265 (333)
T ss_dssp EECGGGGTTCCCTTC---CHHHHHCHHHHHHHHTTCCEEEHHHHHHTTSSSBCCCGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred eechhhceeccCHHH---HHHHHHHHHHHHHHHhcCCCCCHHHHHHCCCccEecChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999876 5899999999999999999999999999999999999999999999999999999886554
No 81
>1szo_A 6-oxocamphor hydrolase; enzyme-product complex; HET: CAX; 1.90A {Rhodococcus SP} SCOP: c.14.1.3 PDB: 1o8u_A
Probab=100.00 E-value=4.2e-44 Score=367.94 Aligned_cols=237 Identities=18% Similarity=0.235 Sum_probs=200.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCccccc
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLM 82 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~ 82 (724)
+.|.++. +++|++||||||+ .|++|.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++... .......+
T Consensus 16 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g~~F~aG~Dl~~~~~~-~~~~~~~~ 93 (257)
T 1szo_A 16 ENIRLER-DGGVLLVTVHTEGKSLVWTSTAHDELAYCFHDIACDRENKVVILTGTGPSFCNEIDFTSFNLG-TPHDWDEI 93 (257)
T ss_dssp TTEEEEE-ETTEEEEEECBTTBSCEECHHHHHHHHHHHHHHHHCTTCCEEEEECBTTBSBCEECGGGSCCS-SHHHHHHH
T ss_pred ceEEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCCccccCcCchhhhcC-CHHHHHHH
Confidence 5689998 7899999999995 7999999999999999999999999999999999999999999987531 11111112
Q ss_pred chhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeC-cccccCccCCcchhhhhcccccHHHHHH
Q 004918 83 PDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGL-PELTLGVIPGFGGTQRLPRLVGLSKAIE 161 (724)
Q Consensus 83 ~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~-pe~~~G~~P~~g~~~~l~r~~G~~~a~~ 161 (724)
.....+++ .+|.++||||||+|||+|+ ||++|+++||+||++++++|++ ||+++|++|++|++++|++++|..+|++
T Consensus 94 ~~~~~~~~-~~l~~~~kPvIAav~G~a~-GG~~LalacD~ria~~~a~f~~~pe~~lGl~p~~g~~~~l~r~vG~~~A~~ 171 (257)
T 1szo_A 94 IFEGQRLL-NNLLSIEVPVIAAVNGPVT-NAPEIPVMSDIVLAAESATFQDGPHFPSGIVPGDGAHVVWPHVLGSNRGRY 171 (257)
T ss_dssp HHHHHHHH-HHHHHCCSCEEEEECSCBC-SSTHHHHTSSEEEEETTCEEECTTSGGGTCCCTTTHHHHHHHHHCHHHHHH
T ss_pred HHHHHHHH-HHHHcCCCcEEEEECCchH-HHHHHHHHCCEEEEeCCCEEecCcccccccCCCccHHHHHHHHcCHHHHHH
Confidence 22234555 6689999999999999999 5999999999999999999999 9999999999999999999999999999
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCCCcHHHHHHHHHHHHHHHHhCCCC
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 241 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (724)
|+++|++++|+||+++||||+|||++++.+++.++++++++.++.+++
T Consensus 172 llltG~~~~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~-------------------------------- 219 (257)
T 1szo_A 172 FLLTGQELDARTALDYGAVNEVLSEQELLPRAWELARGIAEKPLLARR-------------------------------- 219 (257)
T ss_dssp HHHTTCEEEHHHHHHHTSCSEEECHHHHHHHHHHHHHHHHTSCHHHHH--------------------------------
T ss_pred HHHcCCCCCHHHHHHCCCceEEeChHHHHHHHHHHHHHHHhCCHHHHH--------------------------------
Confidence 999999999999999999999999999999999999999998875443
Q ss_pred hhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhh
Q 004918 242 PQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTSRGLVHVFFAQRA 291 (724)
Q Consensus 242 ~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~ 291 (724)
.+|++++.....+++++++.|.. .+++++|-.+.+
T Consensus 220 ----~~K~~l~~~~~~~l~~~l~~~~~-----------~eg~~a~~~~~~ 254 (257)
T 1szo_A 220 ----YARKVLTRQLRRVMEADLSLGLA-----------HEALAAIDLGME 254 (257)
T ss_dssp ----HHHHHHSHHHHHHHHHHHHHHHH-----------HHHHHHHHHC--
T ss_pred ----HHHHHHHhhhhccHHHHHHHHHH-----------Hhhhhhhhcccc
Confidence 34556666555566666666543 367888877654
No 82
>2np9_A DPGC; protein inhibitor complex, oxidoreductase; HET: YE1; 2.45A {Streptomyces toyocaensis} PDB: 2pg8_A*
Probab=100.00 E-value=6.3e-44 Score=386.89 Aligned_cols=246 Identities=23% Similarity=0.208 Sum_probs=200.5
Q ss_pred CcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcC--------C-CCccCCCCchhhhhc
Q 004918 4 PRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGN--------G-GRFSGGFDINVFQKV 73 (724)
Q Consensus 4 ~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~--------g-~~F~aG~Dl~~~~~~ 73 (724)
+.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||. | ++||+|+|++++...
T Consensus 167 ~~v~~e~-~~gVa~ItLNRP~k~NALs~~m~~eL~~al~~~~~D~~VRvVVLtG~~~~~p~~aG~~~FcAG~DL~~~~~~ 245 (440)
T 2np9_A 167 EAVHLER-RDGVARLTMCRDDRLNAEDGQQVDDMETAVDLALLDPGVRVGLLRGGVMSHPRYRGKRVFSAGINLKYLSQG 245 (440)
T ss_dssp SSEEEEE-ETTEEEEEECCTTTTTCBCHHHHHHHHHHHHHHHHCTTCSEEEEEECBCCSTTTTTCBCCBCCBCHHHHHTT
T ss_pred ceEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCCccccccCCCccccCCcchhhhhcc
Confidence 4688888 7899999999995 799999999999999999999999999999994 6 799999999998643
Q ss_pred cCCCccc---ccchhHHHHHHHHH------------hcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCccccc
Q 004918 74 HGAGDVS---LMPDVSVELVVNLI------------EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTL 138 (724)
Q Consensus 74 ~~~~~~~---~~~~~~~~~~~~~l------------~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~ 138 (724)
....... ........++ ..+ .++||||||+|||+|+|||++|+++||||||+++++|++||+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~pkPvIAAVnG~A~GGG~eLALaCDirIAae~A~Fglpev~l 324 (440)
T 2np9_A 246 GISLVDFLMRRELGYIHKLV-RGVLTNDDRPGWWHSPRIEKPWVAAVDGFAIGGGAQLLLVFDRVLASSDAYFSLPAAKE 324 (440)
T ss_dssp CCCTTTTHHHHHHTHHHHHH-HCEECCSCSTTTTTCCEECCCEEEEECSEEETHHHHHGGGCSEEEEETTCEEECCCTTT
T ss_pred CcchhhhhhHHHHHHHHHHH-HHHHhhcccchhhhhhcCCCCEEEEECCcccccchHHHhhCCEEEEcCCCEEECchhcc
Confidence 2111000 0001122333 333 47999999999999999999999999999999999999999999
Q ss_pred CccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCCCC
Q 004918 139 GVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLG 218 (724)
Q Consensus 139 G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~~~ 218 (724)
|++|++| +++|+|++|..+|++|++||++|+|+||+++||||+|||++++.+++.+++.+++. .+
T Consensus 325 Gl~P~~g-~~~L~rlvG~~~A~ellLtG~~i~A~EA~~~GLV~~Vvp~~eL~~~a~~~A~~la~---~A----------- 389 (440)
T 2np9_A 325 GIIPGAA-NLRLGRFAGPRVSRQVILEGRRIWAKEPEARLLVDEVVEPDELDAAIERSLTRLDG---DA----------- 389 (440)
T ss_dssp CCCCTTH-HHHHHHHHHHHHHHHHHHHCCCEETTSGGGGGTCSEEECHHHHHHHHHHHHHTTCS---HH-----------
T ss_pred CcCcchH-HHHHHHHhhHHHHHHHHHcCCCCCHHHHHHCCCCcEecChHHHHHHHHHHHHHhCH---HH-----------
Confidence 9999887 68999999999999999999999999999999999999999999999988877632 11
Q ss_pred CcHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHhhcCCH---HHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhh
Q 004918 219 SLSEAREVLKLARLQAKKTAPNMPQHQACLDVIEEGIVHGG---YSGVLKEAKVFKELVMLDTSRGLVHVFFAQRAT 292 (724)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~l~~E~~~~~~~~~s~~~~~~~~af~~~r~~ 292 (724)
...+|++++.... +. .+.++.|...+..++.|+|++|++.+|++||+.
T Consensus 390 -------------------------v~~~K~~l~~~~~-~~~~~~~~l~~e~~~~~~~~~s~D~~Egv~AFleKR~a 440 (440)
T 2np9_A 390 -------------------------VLANRRMLNLADE-SPDGFRAYMAEFALMQALRLYGHDVIDKVGRFGGRPPA 440 (440)
T ss_dssp -------------------------HHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHTCC-----
T ss_pred -------------------------HHHHHHHHHhhhc-chhHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHhCCCC
Confidence 1234556665543 33 356677788889999999999999999999863
No 83
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=100.00 E-value=5.8e-43 Score=370.19 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=221.5
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCH-HHHHHhhcCcccccCc-c
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQ-DKANNALKMLKGVLDY-S 383 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~-~~~~~~~~~i~~~~~~-~ 383 (724)
+.++||+|||+|+||++||..|+++|++|++||+++++++++.+.+++.+..+++.|.++. ......++++++++++ +
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~e 83 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAE 83 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHH
Confidence 3578999999999999999999999999999999999999999999999988888775431 0123456788888888 5
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCC
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTER 463 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~ 463 (724)
++++||+||+||||+.++|+++|+++.+++++++||+||||++++++++..+.++.+++|+|||+|++.++++|+++++.
T Consensus 84 av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~i~~~~la~~~~~~~r~ig~Hp~~P~~~~~lveiv~g~~ 163 (319)
T 2dpo_A 84 AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPE 163 (319)
T ss_dssp HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTT
T ss_pred HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCChHHHHHHHhcCCCCCeEEeecCCchhhcceEEEeCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHcCCeeEEE-cCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCC---ccHHHHHHh
Q 004918 464 TSAQVILDLMTVGKIIKKVPVVV-GNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLP---IGPFQLLDL 537 (724)
Q Consensus 464 t~~e~~~~~~~l~~~lGk~~v~v-~d~pG~i~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~g~~---~Gp~~~~D~ 537 (724)
|+++++++++++++.+|++|+++ ++.|||++||++.++++||++++++|+ ++++||+++ .++|+| ||||+++|+
T Consensus 164 t~~e~~~~~~~l~~~lGk~~v~v~~~~~Gfi~Nrll~a~~~EA~~l~~~g~~~~~~id~a~~~g~g~~~a~~GP~~~~dl 243 (319)
T 2dpo_A 164 TSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHL 243 (319)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHTTHHHHHTTSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCEEEEECCCcCCchHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCCCccccCHHHHHHh
Confidence 99999999999999999999999 689999999999999999999999986 999999999 789987 899999999
Q ss_pred hchHHHHHHHHHHH
Q 004918 538 AGYGVAAATSKEFD 551 (724)
Q Consensus 538 ~Gld~~~~~~~~l~ 551 (724)
.| +.+.+.++++.
T Consensus 244 ~g-~g~~~~~~~~~ 256 (319)
T 2dpo_A 244 NA-EGMLSYSDRYS 256 (319)
T ss_dssp TT-TSHHHHHHHHH
T ss_pred cC-chHHHHHHHHh
Confidence 98 66666666553
No 84
>3t3w_A Enoyl-COA hydratase; ssgcid, structural genomics, seattle ST genomics center for infectious disease, lyase; 1.80A {Mycobacterium thermoresistibile} PDB: 3ome_A
Probab=100.00 E-value=2.7e-43 Score=366.59 Aligned_cols=205 Identities=27% Similarity=0.348 Sum_probs=173.9
Q ss_pred CCCCcEEEEEecCcEEEEEeCCCC-CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcc
Q 004918 1 MAAPRVTMEVGNDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDV 79 (724)
Q Consensus 1 M~~~~v~~~~~~~~v~~i~l~~p~-~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~ 79 (724)
|+++.|.++. +++|++||||||+ .|+||.+|+++|.++++.++.|+++|+|||||.|++||+|+|++++.........
T Consensus 17 ~~~~~v~~~~-~~~v~~itlnrP~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~G~~F~aG~Dl~~~~~~~~~~~~ 95 (279)
T 3t3w_A 17 RTEMYIDYDV-SDRIATITLNRPEAANAQNPELLDELDAAWTRAAEDNDVSVIVLRANGKHFSAGHDLRGGGPVPDKLTL 95 (279)
T ss_dssp --CCSEEEEE-ETTEEEEEECCGGGTTCBCHHHHHHHHHHHHHHHHCTTCCEEEEEECSSCSBCCBCCC--------CCH
T ss_pred ccCCeEEEEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCCCceeeccChHhhhhcccccch
Confidence 4567899999 7899999999995 8999999999999999999999999999999999999999999988653221111
Q ss_pred c-c---cchhHHHHHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhccccc
Q 004918 80 S-L---MPDVSVELVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVG 155 (724)
Q Consensus 80 ~-~---~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G 155 (724)
. . .......++ .+|.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|+ |+++++.+ ++++|
T Consensus 96 ~~~~~~~~~~~~~~~-~~l~~~~kPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl-~~~~~~~~-~~~vG 172 (279)
T 3t3w_A 96 EFIYAHESRRYLEYS-LRWRNVPKPSIAAVQGRCISGGLLLCWPCDLIIAAEDALFSDPVVLMDI-GGVEYHGH-TWELG 172 (279)
T ss_dssp HHHHHHHHHHTHHHH-HHHHHCSSCEEEEECSEEEGGGHHHHTTSSEEEEETTCEEECCGGGGTC-SSCSSCCH-HHHHC
T ss_pred HHHHHHHHHHHHHHH-HHHHhCCCCEEEEECCeEhHHHHHHHHhCCEEEecCCCEEeCcHHhcCC-CCchHHHH-HhhcC
Confidence 0 1 111223445 6689999999999999999999999999999999999999999999999 55555544 99999
Q ss_pred HHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhh
Q 004918 156 LSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIR 209 (724)
Q Consensus 156 ~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~ 209 (724)
..+|++|++||++++|+||+++||||+|||++++.+++.++|+++++.|+.+++
T Consensus 173 ~~~A~~llltG~~i~A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~a~~ 226 (279)
T 3t3w_A 173 PRKAKEILFTGRAMTAEEVAQTGMVNRVVPRDRLDAETRALAGEIAKMPPFALR 226 (279)
T ss_dssp HHHHHHHHHHCCCEEHHHHHHHTSCSEEECGGGHHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHHHHcCCccCHHHHHHCCCCcEeeChHHHHHHHHHHHHHHHcCCHHHHH
Confidence 999999999999999999999999999999999999999999999998875443
No 85
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=100.00 E-value=1.9e-39 Score=353.37 Aligned_cols=275 Identities=20% Similarity=0.247 Sum_probs=212.8
Q ss_pred CCcEEEEEecCcEEEEEeCCCC-----------CCCCCHHHHHHHHHHHHHHhcC-CCceEEEEEc-CCCCccCCCCchh
Q 004918 3 APRVTMEVGNDGVAIITLINPP-----------VNALAIPIVAGLKDKFEEATSR-DDVKAIVLTG-NGGRFSGGFDINV 69 (724)
Q Consensus 3 ~~~v~~~~~~~~v~~i~l~~p~-----------~Nal~~~~~~~l~~~l~~~~~d-~~v~~vVl~g-~g~~F~aG~Dl~~ 69 (724)
+++|.++. +++|++||||||+ .|++|.+|+.+|.+++++++.| +++|+||||| .|++||+|+|+++
T Consensus 20 ~~~v~ve~-~ggVA~ITLNRPed~~l~~g~~~k~NALs~~ml~eL~~AL~~~~~D~~~VRaVVLTGa~G~~FcAGaDL~e 98 (556)
T 2w3p_A 20 YKHWKLSF-NGPVATLGIDIAEDGGIRDGYKLKLNSYDLGVDIELHDAIQRIRFEHPEVRTVVLTSLKDRVFCSGANIFM 98 (556)
T ss_dssp CSSEEEEE-ETTEEEEEECCCTTCCSSSSCCCCTTEECHHHHHHHHHHHHHHHHHCTTCCEEEEEESSSSEEECEECHHH
T ss_pred CceEEEEe-eCCEEEEEEecccccccccccCCCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCCCcccCCcCHHH
Confidence 35688888 7899999999995 6999999999999999999999 9999999999 8999999999999
Q ss_pred hhhccCCCcccccchhHHHHHHHHH----hcCCCcEEEEECccccchhHHHHhhcCEEEEeCC--ceeeCcccc-cCccC
Q 004918 70 FQKVHGAGDVSLMPDVSVELVVNLI----EDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK--TQLGLPELT-LGVIP 142 (724)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~--a~f~~pe~~-~G~~P 142 (724)
+...... ....+....++++ ..| .++||||||+|||+|+|||++|+++||+|||+++ ++|++||++ +|++|
T Consensus 99 l~~~~~~-~~~~~~~~~~~l~-~~L~~a~~~~pKPVIAAVnG~AlGGGleLALACD~rIAse~~~A~FglPEv~~LGL~P 176 (556)
T 2w3p_A 99 LGLSTHA-WKVNFCKFTNETR-NGLEDSSRHSGLKFLAAVNGACAGGGYELALACDEIYLVDDRSSSVSLPEVPLLGVLP 176 (556)
T ss_dssp HHHSCHH-HHHHHHHHHHHHH-HHHHHHHHHTSCEEEEEECSEEETHHHHHHHHSSEEEEECSSSCEEECCHHHHHSSCC
T ss_pred HhhcccH-HHHHHHHHHHHHH-HHHHHHHhcCCCCEEEEECCeechhhHHHHHhCCEEEEcCCCCcEEecccccccCCCC
Confidence 8653211 1111222334555 567 8999999999999999999999999999999999 999999999 99999
Q ss_pred Ccchhhhhc--ccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchhhhhhhccCC--CC
Q 004918 143 GFGGTQRLP--RLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDK--LG 218 (724)
Q Consensus 143 ~~g~~~~l~--r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~~~~~~~~~~--~~ 218 (724)
++|++++|+ |++|..+|++|+++|++++|+||+++||||+|||++++.+++.++|+++++.++.+++. ++..+ +.
T Consensus 177 g~Ggt~rLp~~RlVG~~rA~eLlLTGr~isA~EAl~lGLVdeVVp~~eL~~~A~~lA~~LA~~~p~Av~~-K~l~~~~l~ 255 (556)
T 2w3p_A 177 GTGGLTRVTDKRKVRHDRADIFCTVVEGVRGERAKAWRLVDEVVKPNQFDQAIQARALELAAQSDRPAHA-QGVPLTRIE 255 (556)
T ss_dssp TTTHHHHHHHTSCCCHHHHHHHTTCSSCEEHHHHHHTTSCSEEECHHHHHHHHHHHHHHHHTTCCCCTTC-CCCCCCCCC
T ss_pred CccHHHHHHhhccCCHHHHHHHHHcCCCCCHHHHHHCCCceEEeChhHHHHHHHHHHHHHHcCChHHHhh-hhhhcchhh
Confidence 999999999 99999999999999999999999999999999999999999999999999998876542 11111 00
Q ss_pred C-c-------HHHHHHHHHHHHH-HHHhCCCChhHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHhCCHHH-HHHHHHHHH
Q 004918 219 S-L-------SEAREVLKLARLQ-AKKTAPNMPQHQACLDVIEEGIVHGGYSGVLKEAKVFKELVMLDTS-RGLVHVFFA 288 (724)
Q Consensus 219 ~-~-------~~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~l~~E~~~~~~~~~s~~~-~~~~~af~~ 288 (724)
. + ......+..++.. ..+.++..|++.+.++++..... .|..+..+++. ...++.|+.
T Consensus 256 r~~~~~gl~y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~------------~~~~l~~~~el~~All~l~~n 323 (556)
T 2w3p_A 256 RTDREDGLTYKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGA------------NWWPLKFAREFDDAILSMRTN 323 (556)
T ss_dssp CEEETTEEEETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGG------------GSHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhccccHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhh------------cchhhhhhhHHHHHHHhhhhc
Confidence 0 0 0000000011111 11344566777777777776543 33333344444 557788887
Q ss_pred hhhhc
Q 004918 289 QRATS 293 (724)
Q Consensus 289 ~r~~~ 293 (724)
.....
T Consensus 324 e~~~~ 328 (556)
T 2w3p_A 324 ELAVG 328 (556)
T ss_dssp CSSCC
T ss_pred cHHHh
Confidence 65543
No 86
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=99.88 E-value=1.9e-22 Score=224.51 Aligned_cols=148 Identities=11% Similarity=0.095 Sum_probs=136.4
Q ss_pred cCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHH
Q 004918 422 NTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPY 501 (724)
Q Consensus 422 ~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~ 501 (724)
.+++.+.++. ...+|.++++.|+++ ++++|+++++.|++++++.+..+++.+||+|++++|.||||+||++.++
T Consensus 324 ~~~~~~~~~~--~~~~~~~~v~~~~~~----~~~vev~~~~~t~~~~~~~~~~~~~~~gk~~~~~~d~~g~i~~Rll~~~ 397 (483)
T 3mog_A 324 ETQGETAQAL--AIRLARPVVVIDKMA----GKVVTIAAAAVNPDSATRKAIYYLQQQGKTVLQIADYPGMLIWRTVAMI 397 (483)
T ss_dssp ECSSSCHHHH--HHHHTSCEEEEECCS----SSEEEEEECTTSCHHHHHHHHHHHHTTTCEEEECCCCTTTTHHHHHHHH
T ss_pred ccCCcchHHH--hhccccceeeeeccc----cceEEEecCCCCCHHHHHHHHHHHHHcCCceeeecccccHHHHHHHHHH
Confidence 5677777766 345688999999988 7899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHHhCCCCCC-CcHHHHHHHHcCCCCc
Q 004918 502 SQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAFPDRSF-QSPLVDLLLKSGRNGK 575 (724)
Q Consensus 502 ~~Ea~~l~~~Gv-~~~~ID~a~-~~~g~~~Gp~~~~D~~Gld~~~~~~~~l~~~~~~~~~-~~~~l~~~v~~g~~G~ 575 (724)
+|||++++++|+ +++|||.++ .|+|||+|||+++|.+|+|++.++++.+++.+++++| |+++|++|+++|++|.
T Consensus 398 ~nEA~~~l~eGvas~~diD~a~~~G~G~P~GPl~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~~lL~~~v~~G~~~~ 474 (483)
T 3mog_A 398 INEALDALQKGVASEQDIDTAMRLGVNYPYGPLAWGAQLGWQRILRLLENLQHHYGEERYRPCSLLRQRALLESGYE 474 (483)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHSCCSSCHHHHHHHHCHHHHHHHHHHHHHHHCCGGGCCCHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHcCCCCC
Confidence 999999999998 999999999 9999999999999999999999999999999987545 9999999999988654
No 87
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.87 E-value=1.8e-23 Score=185.59 Aligned_cols=103 Identities=20% Similarity=0.153 Sum_probs=85.2
Q ss_pred HcCCeeE-EEcCCCchhhhhhhhHHHHHHHHHHHcCC-CHHHHHHHH-HhcCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004918 478 IIKKVPV-VVGNCTGFAVNRAFFPYSQSARLLVSLGV-DVFRIDSAI-RSFGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (724)
Q Consensus 478 ~lGk~~v-~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv-~~~~ID~a~-~~~g~~~Gp~~~~D~~Gld~~~~~~~~l~~~~ 554 (724)
.++|.+| +++|.||||+||++.++++||++++++|+ +++|||.++ .++|||+|||+++|.+|+|+++++++.+++.+
T Consensus 3 ~~~K~~v~~~~d~~gfi~nRll~~~~~eA~~ll~eGva~~~dID~a~~~g~G~p~GPf~~~D~~Gld~~~~~~~~l~~~~ 82 (110)
T 3ctv_A 3 SKGRPQIDSSKATDKINPMDFTFVEINEAVKLVEMGVATPQDIDTAIKLGLNRPFGPFELAKQFGAEQIAKRLEELAKQF 82 (110)
T ss_dssp --------------CCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTCSSCHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCCCCCcccCCCCccHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4789999 88999999999999999999999999997 999999999 89999999999999999999999999999988
Q ss_pred CC-CCCCcHHHHHHHHcCCCCcccCcc
Q 004918 555 PD-RSFQSPLVDLLLKSGRNGKANGKG 580 (724)
Q Consensus 555 ~~-~~~~~~~l~~~v~~g~~G~k~g~G 580 (724)
++ ++.|++++++|+++|++|+|||+|
T Consensus 83 g~~~~~p~~~L~~~v~~G~lG~k~g~G 109 (110)
T 3ctv_A 83 GKKIFEPAKTLKEGKLEELLKAGKAEG 109 (110)
T ss_dssp CCGGGSCCHHHHTTTHHHHHHHHHHC-
T ss_pred CCCcCCCCHHHHHHHHcCCCCccCCCC
Confidence 87 444889999999999999999998
No 88
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=99.79 E-value=3.1e-20 Score=212.08 Aligned_cols=168 Identities=20% Similarity=0.212 Sum_probs=142.8
Q ss_pred cCcEEEEEeCCCC-CCC--CCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHH
Q 004918 12 NDGVAIITLINPP-VNA--LAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVE 88 (724)
Q Consensus 12 ~~~v~~i~l~~p~-~Na--l~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~ 88 (724)
+++|++|++|+|. .|+ ++..+.++|.++|+.++.|+++|+|||++.+ .|+|+.... ...+
T Consensus 300 ~~~VavI~l~g~i~~n~~~~~~~~~~~l~~~L~~a~~d~~vkaVVL~i~s----pGG~~~~~~-------------~i~~ 362 (593)
T 3bf0_A 300 GDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNS----PGGSVTASE-------------VIRA 362 (593)
T ss_dssp SCEEEEEEEEEEEESSSSCTTSEEHHHHHHHHHHHHHCTTEEEEEEEEEE----EEECHHHHH-------------HHHH
T ss_pred CCCEEEEEEeeeecCCccccchhHHHHHHHHHHHHHhCCCCCEEEEEecC----CCCCHHHHH-------------HHHH
Confidence 5789999999994 677 6889999999999999999999999999874 477775421 1234
Q ss_pred HHHHHHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCccc------------ccCccCCc------------
Q 004918 89 LVVNLIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPEL------------TLGVIPGF------------ 144 (724)
Q Consensus 89 ~~~~~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~------------~~G~~P~~------------ 144 (724)
.+ +++..++|||||+|+|.|.|||+.|+++||+++|++++.|+.+++ ++|+.|..
T Consensus 363 ~i-~~l~~~~kPVia~v~g~AasgG~~iA~aaD~iva~p~a~~Gsigv~~~~~~~~~~~~klGi~~~~~~~g~~k~~~~~ 441 (593)
T 3bf0_A 363 EL-AAARAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGVHTDGVSTSPLADVSIT 441 (593)
T ss_dssp HH-HHHHHTTCCEEEEEEEEEETHHHHTTTTCSEEEECTTCEEECCCEEEEEEECHHHHHHTTCEEECCBSCGGGCCCTT
T ss_pred HH-HHHHhCCCCEEEEECCChHHHHHHHHHhCCEEEECCCCEeecceeEEecCchHHHHHhcCceeeeeecccccccCcC
Confidence 45 557889999999999999999999999999999999999999985 68987643
Q ss_pred -chh---------------hhhcccccHHH-----HHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHH
Q 004918 145 -GGT---------------QRLPRLVGLSK-----AIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWA 197 (724)
Q Consensus 145 -g~~---------------~~l~r~~G~~~-----a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a 197 (724)
+.+ .++++.++..+ +.+++++|+.++|+||+++||||+|++.+++.+.+.+++
T Consensus 442 ~~~t~~~~~~l~~~l~~~~~~f~~~V~~~Rg~~~~a~~~l~~G~~~ta~eA~~~GLVD~v~~~~~~~~~a~~~a 515 (593)
T 3bf0_A 442 RALPPEAQLMMQLSIENGYKRFITLVADARHSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELA 515 (593)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHTTCTTCEEEHHHHHHHTSCSEECCHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCCCcCHHHHHHCCCCcCccCHHHHHHHHHHHc
Confidence 233 56778888888 999999999999999999999999999888888777654
No 89
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=99.79 E-value=7.3e-20 Score=194.24 Aligned_cols=204 Identities=17% Similarity=0.205 Sum_probs=161.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+||+|||+|.||.++|..|+.+|+ +|++||++++.++.....+..... ......++..+++++++++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~------------~~~~~~~i~~t~d~~a~~~ 72 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMV------------MFGSTSKVIGTDDYADISG 72 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhh------------hcCCCcEEEECCCHHHhCC
Confidence 589999999999999999999999 999999999887753222211100 0111245666678888999
Q ss_pred CCEEEEcc--------------cCChHHHHHHHHHHHhhCCCCcEE--EecCCCCCHHHHhcccCC-CCCEEEEecCCCC
Q 004918 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTSS-QDRIIGAHFFSPA 450 (724)
Q Consensus 388 aDlVIeav--------------~e~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~~-~~r~ig~h~~~p~ 450 (724)
||+||+++ +++.++++++++++.++++ ++++ +||++.+....+...... |+|++|+
T Consensus 73 aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~-~~iii~~sNp~~~~~~~~~~~~~~~~~rviG~------ 145 (317)
T 2ewd_A 73 SDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCP-NAFVICITNPLDVMVSHFQKVSGLPHNKVCGM------ 145 (317)
T ss_dssp CSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEECCSSHHHHHHHHHHHHCCCGGGEEES------
T ss_pred CCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEEeCChHHHHHHHHHHhhCCCHHHEEec------
Confidence 99999999 7888999999999999975 7766 577776666666666654 6788874
Q ss_pred CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhh---hhhHHHHHH-------HHHHHcCC-CHHHHH
Q 004918 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNR---AFFPYSQSA-------RLLVSLGV-DVFRID 519 (724)
Q Consensus 451 ~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nR---l~~~~~~Ea-------~~l~~~Gv-~~~~ID 519 (724)
.|+.++......+.+.+|+.+ ++.+||++|| .++++++++ ..++++|+ +++++|
T Consensus 146 ------------~t~ld~~r~~~~la~~lg~~~---~~v~~~v~g~Hg~~~~~~~~~a~v~g~~~~~~~~~g~~~~~~id 210 (317)
T 2ewd_A 146 ------------AGVLDSSRFRTFIAQHFGVNA---SDVSANVIGGHGDGMVPATSSVSVGGVPLSSFIKQGLITQEQID 210 (317)
T ss_dssp ------------CHHHHHHHHHHHHHHHHTSCG---GGEECCEEBCSSTTCEECGGGCEETTEEHHHHHHTTSSCHHHHH
T ss_pred ------------cCcHHHHHHHHHHHHHhCcCh---hhceEEEEecCCCceeEEeeccccCCEEHHHHHhccCCCHHHHH
Confidence 367888888889999999874 8999999999 889999998 88999985 999999
Q ss_pred HHHHhcCCCccHHHHHHhhch-HHHHHHHH
Q 004918 520 SAIRSFGLPIGPFQLLDLAGY-GVAAATSK 548 (724)
Q Consensus 520 ~a~~~~g~~~Gp~~~~D~~Gl-d~~~~~~~ 548 (724)
.++... ++||++++|..|. ++.+.+..
T Consensus 211 ~~~~~~--~~~~~ei~~~~g~g~~~~~~a~ 238 (317)
T 2ewd_A 211 EIVCHT--RIAWKEVADNLKTGTAYFAPAA 238 (317)
T ss_dssp HHHHHH--HHHHHHHHHHHSSSCCCHHHHH
T ss_pred HHHHHH--HhhHHHHHHhhcCCchHHHHHH
Confidence 998433 7899999998887 55544433
No 90
>3rst_A Signal peptide peptidase SPPA; alpha/beta protein fold, signal peptide digestion, bacterial membrane, hydrolase; 2.37A {Bacillus subtilis}
Probab=99.77 E-value=1.8e-18 Score=175.30 Aligned_cols=167 Identities=19% Similarity=0.185 Sum_probs=129.1
Q ss_pred cCcEEEEEeCCC-CCC-----CCC--HHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccc
Q 004918 12 NDGVAIITLINP-PVN-----ALA--IPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMP 83 (724)
Q Consensus 12 ~~~v~~i~l~~p-~~N-----al~--~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~ 83 (724)
+++|++|+++.+ ..+ .++ .-.+++|.++|+.+..|+++|+|||++. |.|+|+....
T Consensus 2 ~~~iavi~i~G~I~~~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~~~----s~Gg~~~~~~------------ 65 (240)
T 3rst_A 2 SSKIAVLEVSGTIQDNGDSSSLLGADGYNHRTFLKNLERAKDDKTVKGIVLKVN----SPGGGVYESA------------ 65 (240)
T ss_dssp CCEEEEEEEESCBCCC---------CCCCHHHHHHHHHHHHHCTTEEEEEEEEE----ECCBCHHHHH------------
T ss_pred CCeEEEEEEEEEEcCCCCcCcccccCCcCHHHHHHHHHHHHhCCCcEEEEEEec----CCCCCHHHHH------------
Confidence 568999999877 222 111 0136899999999999999999999986 5788886532
Q ss_pred hhHHHHHHHHHhc-CCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCc---------------------ccccCcc
Q 004918 84 DVSVELVVNLIED-CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLP---------------------ELTLGVI 141 (724)
Q Consensus 84 ~~~~~~~~~~l~~-~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~p---------------------e~~~G~~ 141 (724)
...+.+ +.+.. ++|||||+++|.|.|||++|+++||+++|++++.|+.+ +++.|..
T Consensus 66 -~i~~~l-~~~~~~~~kPVia~v~g~a~~gG~~lA~a~D~i~a~~~a~~g~~Gv~~~~~~~~~~l~k~Gi~~~~~~~G~~ 143 (240)
T 3rst_A 66 -EIHKKL-EEIKKETKKPIYVSMGSMAASGGYYISTAADKIFATPETLTGSLGVIMESVNYSKLADKLGISFETIKSGAH 143 (240)
T ss_dssp -HHHHHH-HHHHHHHCCCEEEEEEEEEETHHHHHHTTSSEEEECTTCEEECCCCEEEEEECHHHHHHHTCEEEEEESSTT
T ss_pred -HHHHHH-HHHHHhCCCeEEEEECCeehHhHHHHHHhCCeeEECCCCeEeccceeeEecCHHHHHHHcCCeEEEEecccc
Confidence 122444 44666 89999999999999999999999999999999999999 6677777
Q ss_pred CCcchhh--------------------------hhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecCcchHHHHHHH
Q 004918 142 PGFGGTQ--------------------------RLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL 195 (724)
Q Consensus 142 P~~g~~~--------------------------~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~ 195 (724)
++.+..+ .-.|.+......+ +++|+.+++++|+++||||++.+.+++.+.+.+
T Consensus 144 k~~~~p~~~~s~~~~~~~~~~l~~~~~~f~~~Va~~R~l~~~~~~~-~~~g~~~~a~~A~~~GLVD~i~~~~~~~~~~~~ 222 (240)
T 3rst_A 144 ADIMSPSREMTKEEKNIMQSMVDNSYEGFVDVISKGRGMPKAEVKK-IADGRVYDGRQAKKLNLVDELGFYDDTITAMKK 222 (240)
T ss_dssp TTTTCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH-HCSSCEEEHHHHHHTTSSSEECCHHHHHHHHHH
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH-HhcCCcccHHHHHHcCCCcccCCHHHHHHHHHH
Confidence 7665322 2234455554444 789999999999999999999998887777666
Q ss_pred HH
Q 004918 196 WA 197 (724)
Q Consensus 196 ~a 197 (724)
++
T Consensus 223 ~~ 224 (240)
T 3rst_A 223 DH 224 (240)
T ss_dssp HC
T ss_pred Hh
Confidence 54
No 91
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=99.77 E-value=3.9e-18 Score=177.55 Aligned_cols=189 Identities=15% Similarity=0.086 Sum_probs=145.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC---cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-c
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI---YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~---~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (724)
.+||+|||+|.||.+|+..|+++|+ +|++||++++++++..+. . .+..+++. +
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~----------~-------------gi~~~~~~~~ 59 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK----------C-------------GVHTTQDNRQ 59 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT----------T-------------CCEEESCHHH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH----------c-------------CCEEeCChHH
Confidence 4689999999999999999999999 999999999987765321 0 13334444 6
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHHHhh-CCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeE-ecC
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEI-VRT 461 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l~~~-~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lvei-i~~ 461 (724)
.+++||+||+||| ++...++++++.+. ++++++|+|++++++++.+...+..+.+++++||+.|...+..+++ +++
T Consensus 60 ~~~~aDvVilav~--p~~~~~vl~~l~~~~l~~~~iiiS~~agi~~~~l~~~l~~~~~vvr~mPn~p~~v~~g~~~l~~~ 137 (280)
T 3tri_A 60 GALNADVVVLAVK--PHQIKMVCEELKDILSETKILVISLAVGVTTPLIEKWLGKASRIVRAMPNTPSSVRAGATGLFAN 137 (280)
T ss_dssp HHSSCSEEEECSC--GGGHHHHHHHHHHHHHTTTCEEEECCTTCCHHHHHHHHTCCSSEEEEECCGGGGGTCEEEEEECC
T ss_pred HHhcCCeEEEEeC--HHHHHHHHHHHHhhccCCCeEEEEecCCCCHHHHHHHcCCCCeEEEEecCChHHhcCccEEEEeC
Confidence 7899999999998 68889999999998 8899899999999999999998888889999999999999887775 568
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCC--chh-----hhhhhhHHHHHHHH--HHHcCCCHHHHHHHH
Q 004918 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCT--GFA-----VNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (724)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~p--G~i-----~nRl~~~~~~Ea~~--l~~~Gv~~~~ID~a~ 522 (724)
+.++++.++.++++++.+|+.+++..+.. .+. ..-+++ ++.|++. .++.|+++++.-+++
T Consensus 138 ~~~~~~~~~~v~~l~~~iG~~~~v~~E~~~d~~talsgsgpa~~~-~~~eal~~a~v~~Gl~~~~a~~l~ 206 (280)
T 3tri_A 138 ETVDKDQKNLAESIMRAVGLVIWVSSEDQIEKIAALSGSGPAYIF-LIMEALQEAAEQLGLTKETAELLT 206 (280)
T ss_dssp TTSCHHHHHHHHHHHGGGEEEEECSSHHHHHHHHHHTTSHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCeEEECCHHHhhHHHHHhccHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 88999999999999999998554323210 000 011222 2233332 346788887766655
No 92
>3ctv_A HBD-10, 3-hydroxyacyl-COA dehydrogenase; structural genomics, APC7539, PSI-2, protein structure initiative; 2.46A {Archaeoglobus fulgidus dsm 4304}
Probab=99.75 E-value=7.9e-19 Score=155.58 Aligned_cols=84 Identities=27% Similarity=0.445 Sum_probs=78.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCC-CCCCC
Q 004918 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPS 697 (724)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~ 697 (724)
++++|+||++.+++|||++|+++||+ |++|||.+|++|+|||+ |||+++|.+|+|+++++++.+++.+++ +|.|+
T Consensus 15 ~~gfi~nRll~~~~~eA~~ll~eGva-~~~dID~a~~~g~G~p~---GPf~~~D~~Gld~~~~~~~~l~~~~g~~~~~p~ 90 (110)
T 3ctv_A 15 TDKINPMDFTFVEINEAVKLVEMGVA-TPQDIDTAIKLGLNRPF---GPFELAKQFGAEQIAKRLEELAKQFGKKIFEPA 90 (110)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHTTCSS---CHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCC
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHcCCCCc---cHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCC
Confidence 57899999999999999999999999 99999999999999999 999999999999999999999999988 89999
Q ss_pred HHHHHHHHc
Q 004918 698 RFLEERATK 706 (724)
Q Consensus 698 ~~l~~~~k~ 706 (724)
++|++|+++
T Consensus 91 ~~L~~~v~~ 99 (110)
T 3ctv_A 91 KTLKEGKLE 99 (110)
T ss_dssp HHHHTTTHH
T ss_pred HHHHHHHHc
Confidence 999999843
No 93
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=99.74 E-value=1e-17 Score=166.94 Aligned_cols=148 Identities=23% Similarity=0.302 Sum_probs=125.4
Q ss_pred cCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHH
Q 004918 12 NDGVAIITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV 91 (724)
Q Consensus 12 ~~~v~~i~l~~p~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 91 (724)
.+.|++|++++ ++++.+.+.|.++|+.++++ ++++|||+.. |.|+|+... ..++
T Consensus 7 ~~~V~vI~i~g----~I~~~~~~~l~~~l~~a~~~-~~~~Ivl~in----spGG~v~~~----------------~~i~- 60 (230)
T 3viv_A 7 KNIVYVAQIKG----QITSYTYDQFDRYITIAEQD-NAEAIIIELD----TPGGRADAM----------------MNIV- 60 (230)
T ss_dssp CCEEEEEEEES----CBCHHHHHHHHHHHHHHHHT-TCSEEEEEEE----BSCEEHHHH----------------HHHH-
T ss_pred CCeEEEEEEeC----EECHHHHHHHHHHHHHHhcC-CCCEEEEEEe----CCCcCHHHH----------------HHHH-
Confidence 56799999985 69999999999999999864 6999999865 677776432 2455
Q ss_pred HHHhcCCCcEEEEE---CccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhh---------------hhccc
Q 004918 92 NLIEDCKKPIVAAV---EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQ---------------RLPRL 153 (724)
Q Consensus 92 ~~l~~~~kp~Iaav---~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~---------------~l~r~ 153 (724)
+.|..+++|||++| +|.|.|+|+.|+++||+++|+++++|+.+++..+. |+.|.+. .+++.
T Consensus 61 ~~i~~~~~PVia~v~p~~G~AasaG~~ia~a~d~~~a~p~a~ig~~~p~~~~-~~~G~~~~~~~k~~~~~~~~~~~la~~ 139 (230)
T 3viv_A 61 QRIQQSKIPVIIYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGY-SQNGSIIEAPPAITNYFIAYIKSLAQE 139 (230)
T ss_dssp HHHHTCSSCEEEEECSTTCEEETHHHHHHHTSSEEEECTTCEEECCCEEEEE-CTTSCEEECCHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEEecCCCEEhHHHHHHHHhcCceeECCCCEEEeccceecC-CCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 66889999999999 99999999999999999999999999999997533 5555431 36677
Q ss_pred ccH--HHHHHHHHcCCCCCHHHHHHCCCcceecCc
Q 004918 154 VGL--SKAIEMMLLSKSITSEEGWKLGLIDAVVTS 186 (724)
Q Consensus 154 ~G~--~~a~~l~ltg~~i~a~eA~~~Glv~~vv~~ 186 (724)
.|. ..+.+++.++..++|+||+++||||+|++.
T Consensus 140 ~Gr~~~~a~~~~~~~~~ltA~EAle~GliD~V~~~ 174 (230)
T 3viv_A 140 SGRNATIAEEFITKDLSLTPEEALKYGVIEVVARD 174 (230)
T ss_dssp TTCCHHHHHHHHHTCCEECHHHHHHTTSCSEECSS
T ss_pred hCcCHHHHHHHHhcCCeecHHHHHHcCCceEecCC
Confidence 785 789999999999999999999999999964
No 94
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=99.72 E-value=2.3e-17 Score=170.71 Aligned_cols=211 Identities=10% Similarity=0.026 Sum_probs=154.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
+||+|||+|.||..+|..|++.|++ |++||++++++++..+.+ .+..++++ +.++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-----------------------g~~~~~~~~~~~~ 67 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-----------------------EAEYTTDLAEVNP 67 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-----------------------TCEEESCGGGSCS
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-----------------------CCceeCCHHHHhc
Confidence 4899999999999999999999999 999999999876643210 12334455 5678
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCC-----CCCCeeeEecC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA-----HVMPLLEIVRT 461 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~-----~~~~lveii~~ 461 (724)
+||+||+|+|++ ...++++++.+.++++++|++++++.+.+.+...+.. .-..|+++|. ..++.+.++-
T Consensus 68 ~~Dvvi~av~~~--~~~~v~~~l~~~~~~~~ivv~~s~~~~~~~l~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~v- 141 (266)
T 3d1l_A 68 YAKLYIVSLKDS--AFAELLQGIVEGKREEALMVHTAGSIPMNVWEGHVPH---YGVFYPMQTFSKQREVDFKEIPFFI- 141 (266)
T ss_dssp CCSEEEECCCHH--HHHHHHHHHHTTCCTTCEEEECCTTSCGGGSTTTCSS---EEEEEECCCC---CCCCCTTCCEEE-
T ss_pred CCCEEEEecCHH--HHHHHHHHHHhhcCCCcEEEECCCCCchHHHHHHHHh---ccCcCCceecCCCchhhcCCCeEEE-
Confidence 999999999944 4488889998888899999999999988776555433 2236776652 1223333332
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--Cch-----hhhhhh--hHHHHHHHHHHHcCCCHHHHHHHH-Hh------c
Q 004918 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--TGF-----AVNRAF--FPYSQSARLLVSLGVDVFRIDSAI-RS------F 525 (724)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~--pG~-----i~nRl~--~~~~~Ea~~l~~~Gv~~~~ID~a~-~~------~ 525 (724)
..++++.++.++++++.+|+.++++++. +++ ++|++. ...+.|++. .+.|++++++..++ .. .
T Consensus 142 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~eal~-~~~Gl~~~~~~~l~~~~~~~~~~~ 220 (266)
T 3d1l_A 142 EASSTEDAAFLKAIASTLSNRVYDADSEQRKSLHLAAVFTCNFTNHMYALAAELL-KKYNLPFDVMLPLIDETARKVHEL 220 (266)
T ss_dssp EESSHHHHHHHHHHHHTTCSCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTTCCGGGGHHHHHHHHHHHHHS
T ss_pred ecCCHHHHHHHHHHHHhcCCcEEEeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHhc
Confidence 2458999999999999999999999754 456 677775 344456633 46699888875544 21 1
Q ss_pred ---CCCccHHHHHHhhchHHHHHHHHH
Q 004918 526 ---GLPIGPFQLLDLAGYGVAAATSKE 549 (724)
Q Consensus 526 ---g~~~Gp~~~~D~~Gld~~~~~~~~ 549 (724)
+.++||+...|..|++.....++.
T Consensus 221 ~~~~~~~GP~~r~d~~~l~~~l~~l~~ 247 (266)
T 3d1l_A 221 EPKTAQTGPAIRYDENVIGNHLRMLAD 247 (266)
T ss_dssp CHHHHCCSTTTTTCHHHHHHHHHHTTT
T ss_pred ChhhhCCCCCccCCHHHHHHHHHHHhc
Confidence 346799999999999987776643
No 95
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=99.70 E-value=1.1e-16 Score=163.77 Aligned_cols=188 Identities=16% Similarity=0.175 Sum_probs=143.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC----cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-c
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI----YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~----~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (724)
+||+|||+|.||.+++..|+++|+ +|++|||+++++++..+.. .+..+++. +
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-----------------------g~~~~~~~~e 59 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-----------------------GLTTTTDNNE 59 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-----------------------CCEECSCHHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-----------------------CCEEeCChHH
Confidence 689999999999999999999998 9999999999877653211 12334444 5
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCC-eeeEecCC
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTE 462 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveii~~~ 462 (724)
.+++||+||+||| ++..+++++++.+.++++++|+|.++++++..+...+....++++.||+.|..... ...+++++
T Consensus 60 ~~~~aDvVilav~--~~~~~~v~~~l~~~l~~~~~vvs~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~~ 137 (247)
T 3gt0_A 60 VAKNADILILSIK--PDLYASIINEIKEIIKNDAIIVTIAAGKSIESTENAFNKKVKVVRVMPNTPALVGEGMSALCPNE 137 (247)
T ss_dssp HHHHCSEEEECSC--TTTHHHHC---CCSSCTTCEEEECSCCSCHHHHHHHHCSCCEEEEEECCGGGGGTCEEEEEEECT
T ss_pred HHHhCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEecCCCCHHHHHHHhCCCCcEEEEeCChHHHHcCceEEEEeCC
Confidence 6788999999997 77788999999998999999999999999998888877777899999999998887 56777888
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCC-----chhhh-hhhhHHHHHHHHH--HHcCCCHHHHHHHH
Q 004918 463 RTSAQVILDLMTVGKIIKKVPVVVGNCT-----GFAVN-RAFFPYSQSARLL--VSLGVDVFRIDSAI 522 (724)
Q Consensus 463 ~t~~e~~~~~~~l~~~lGk~~v~v~d~p-----G~i~n-Rl~~~~~~Ea~~l--~~~Gv~~~~ID~a~ 522 (724)
.++++.++.++++++.+|+ ++++.+.. +.... ..+..++.|++.. .+.|+++++..+++
T Consensus 138 ~~~~~~~~~~~~l~~~~G~-~~~~~e~~~d~~~a~~g~gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~ 204 (247)
T 3gt0_A 138 MVTEKDLEDVLNIFNSFGQ-TEIVSEKLMDVVTSVSGSSPAYVYMIIEAMADAAVLDGMPRNQAYKFA 204 (247)
T ss_dssp TCCHHHHHHHHHHHGGGEE-EEECCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhCCC-EEEeCHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 8999999999999999998 55554311 11100 1122233455543 46699998888777
No 96
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.69 E-value=4.3e-16 Score=164.62 Aligned_cols=166 Identities=15% Similarity=0.165 Sum_probs=129.7
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (724)
+.++||+|||+|.||.++|..|.++|+ +|++||++++.++.+. +.|.++ ..+++.
T Consensus 31 ~~~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-----------~~G~~~-----------~~~~~~~ 88 (314)
T 3ggo_A 31 LSMQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGIID-----------EGTTSIA 88 (314)
T ss_dssp CSCSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSCS-----------EEESCTT
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-----------HCCCcc-----------hhcCCHH
Confidence 346899999999999999999999999 9999999998876643 223211 224455
Q ss_pred c-CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccCCCCCEEEEecCCCCC--------
Q 004918 383 S-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-------- 451 (724)
Q Consensus 383 ~-~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~-------- 451 (724)
+ .+++||+||+||| .....++++++.+.++++++|++.+|+.. +..+...+. .+|++.||+.++.
T Consensus 89 ~~~~~~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~--~~~v~~hPm~G~e~sG~~~A~ 164 (314)
T 3ggo_A 89 KVEDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILG--KRFVGGHPIAGTEKSGVEYSL 164 (314)
T ss_dssp GGGGGCCSEEEECSC--GGGHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHG--GGEECEEECCCCCCCSGGGCC
T ss_pred HHhhccCCEEEEeCC--HHHHHHHHHHHhhccCCCcEEEECCCCcHHHHHHHHHhcC--CCEEecCcccCCcccchhhhh
Confidence 4 6899999999999 55577899999999999999988776643 345555443 2899999987653
Q ss_pred ----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc-CCCchhhhhh
Q 004918 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG-NCTGFAVNRA 497 (724)
Q Consensus 452 ----~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~-d~pG~i~nRl 497 (724)
.+..+.+++++.++++.++.++++++.+|+.+++++ +....++..+
T Consensus 165 ~~Lf~g~~~il~~~~~~~~~~~~~v~~l~~~~G~~v~~~~~~~hD~~~a~~ 215 (314)
T 3ggo_A 165 DNLYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSPELHDYVFGVV 215 (314)
T ss_dssp TTTTTTCEEEECCCTTSCHHHHHHHHHHHHHTTCEEEECCHHHHHHHHHHH
T ss_pred hhhhcCCEEEEEeCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHHH
Confidence 356788888989999999999999999999999884 4455555443
No 97
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.69 E-value=1.3e-16 Score=168.09 Aligned_cols=191 Identities=15% Similarity=0.145 Sum_probs=134.7
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
+|+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..+++. +.+
T Consensus 2 ~m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 57 (302)
T 2h78_A 2 HMKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA-----------AG-------------ASAARSARDAV 57 (302)
T ss_dssp -CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH-----------TT-------------CEECSSHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CC-------------CeEcCCHHHHH
Confidence 3679999999999999999999999999999999998776432 12 3334455 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH---HHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCCCC----CCCe
Q 004918 386 KDVDMVIEAVIESVPLKQKIFS---ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPAH----VMPL 455 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~---~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~~----~~~l 455 (724)
++||+||+|||++..++ .++. ++.+.++++++|++.++..+.. .+...+. ...+|+. +++.+.. .+.+
T Consensus 58 ~~aDvvi~~vp~~~~~~-~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~~~~~-~pv~~~~~~~~~g~l 135 (302)
T 2h78_A 58 QGADVVISMLPASQHVE-GLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAGAAAGTL 135 (302)
T ss_dssp TTCSEEEECCSCHHHHH-HHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTCCEEE-CCEESCHHHHHHTCE
T ss_pred hCCCeEEEECCCHHHHH-HHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCEEEE-EEccCChhhHhcCCc
Confidence 89999999999666554 4454 6777888888887654443332 3444443 2234554 2332211 1233
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCchh---hhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004918 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA---VNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (724)
Q Consensus 456 veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~pG~i---~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 525 (724)
+.++.+ ++++++.++++++.+|+.++++++ ..+.. +|+++. .+++|++.+.+. |+++++++.++ .+.
T Consensus 136 ~~~~~g---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~ 212 (302)
T 2h78_A 136 TFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSS 212 (302)
T ss_dssp EEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST
T ss_pred eEEeCC---CHHHHHHHHHHHHHhCCCeEEcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 445444 699999999999999999999876 33333 566654 478899998876 89999999998 444
Q ss_pred C
Q 004918 526 G 526 (724)
Q Consensus 526 g 526 (724)
+
T Consensus 213 ~ 213 (302)
T 2h78_A 213 G 213 (302)
T ss_dssp T
T ss_pred C
Confidence 3
No 98
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.67 E-value=1.2e-16 Score=167.41 Aligned_cols=187 Identities=17% Similarity=0.173 Sum_probs=132.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
|+||+|||+|.||.+||.+|+++||+|++|||++++++... +.| ....++. +.++
T Consensus 3 M~kIgfIGlG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~-----------~~G-------------a~~a~s~~e~~~ 58 (300)
T 3obb_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-----------AAG-------------ASAARSARDAVQ 58 (300)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEECSSHHHHHT
T ss_pred cCEEEEeeehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHH-----------HcC-------------CEEcCCHHHHHh
Confidence 68999999999999999999999999999999999877643 222 2233444 6678
Q ss_pred CCCEEEEcccCChHHHHHHHH--HHHhhCCCCcEEEecCCCCCHH---HHhcccCCCCCEEEEecCCCCCCC--------
Q 004918 387 DVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVM-------- 453 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~~r~ig~h~~~p~~~~-------- 453 (724)
+||+||.|+|.+.++...++. .+.+.++++++|+. +|+.+++ ++++.+... |.+|.+.|..+
T Consensus 59 ~~dvv~~~l~~~~~v~~V~~~~~g~~~~~~~g~iiId-~sT~~p~~~~~~a~~~~~~----G~~~lDaPVsGg~~~A~~G 133 (300)
T 3obb_A 59 GADVVISMLPASQHVEGLYLDDDGLLAHIAPGTLVLE-CSTIAPTSARKIHAAARER----GLAMLDAPVSGGTAGAAAG 133 (300)
T ss_dssp TCSEEEECCSCHHHHHHHHHSSSSSTTSCCC-CEEEE-CSCCCHHHHHHHHHHHHTT----TCEEEECCEESCHHHHHHT
T ss_pred cCCceeecCCchHHHHHHHhchhhhhhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEecCCCCCHHHHHhC
Confidence 999999999976666554443 26677788888875 4444443 344444322 56776555322
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-Cc---hhhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004918 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG---FAVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-R 523 (724)
Q Consensus 454 ~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-pG---~i~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~-~ 523 (724)
.+.-++.| +++++++++++++.+|+.++++++. .| .++|.++. ..+.|++.+.+. |++++.+-+++ .
T Consensus 134 ~L~imvGG---~~~~~~~~~p~l~~~g~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~ 210 (300)
T 3obb_A 134 TLTFMVGG---DAEALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRR 210 (300)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT
T ss_pred CEEEEEeC---CHHHHHHHHHHHHHhCCCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 34445555 6999999999999999999999863 12 24455432 334599988876 89999998888 4
Q ss_pred hcC
Q 004918 524 SFG 526 (724)
Q Consensus 524 ~~g 526 (724)
+.+
T Consensus 211 ~~~ 213 (300)
T 3obb_A 211 SSG 213 (300)
T ss_dssp STT
T ss_pred Ccc
Confidence 443
No 99
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.65 E-value=1.7e-16 Score=167.81 Aligned_cols=191 Identities=12% Similarity=0.096 Sum_probs=133.9
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
..|+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..+++. +.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g-------------~~~~~~~~~~ 74 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE-----------HG-------------ASVCESPAEV 74 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------TT-------------CEECSSHHHH
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeEcCCHHHH
Confidence 45789999999999999999999999999999999998766431 12 2334454 56
Q ss_pred cCCCCEEEEcccCChHHHHHHH--HHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCCC----CCCCe
Q 004918 385 FKDVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA----HVMPL 455 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~----~~~~l 455 (724)
+++||+||+|||++..++..++ .++.+.++++++|++.++..+.+ .+...+. ...+|+. |+.... ..+++
T Consensus 75 ~~~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~-~pv~g~~~~a~~g~l 153 (310)
T 3doj_A 75 IKKCKYTIAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVE-GPVSGSKKPAEDGQL 153 (310)
T ss_dssp HHHCSEEEECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCE
T ss_pred HHhCCEEEEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEe-CCCCCChhHHhcCCe
Confidence 7899999999997666654443 66778888998887644433322 2333322 2223333 222110 12234
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-Hh
Q 004918 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RS 524 (724)
Q Consensus 456 veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG------~i~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~ 524 (724)
+.++.+ ++++++.++++++.+|+.++++++ +| ++.|.++ ...++|++.+.+. |++++++..++ .+
T Consensus 154 ~i~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~ 229 (310)
T 3doj_A 154 IILAAG---DKALFEESIPAFDVLGKRSFYLGQ-VGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLG 229 (310)
T ss_dssp EEEEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred EEEEcC---CHHHHHHHHHHHHHhCCCEEEeCC-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc
Confidence 455555 589999999999999999999986 55 4455553 3557899998876 89999999998 54
Q ss_pred c
Q 004918 525 F 525 (724)
Q Consensus 525 ~ 525 (724)
.
T Consensus 230 ~ 230 (310)
T 3doj_A 230 A 230 (310)
T ss_dssp T
T ss_pred c
Confidence 3
No 100
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.64 E-value=1.1e-16 Score=167.79 Aligned_cols=185 Identities=14% Similarity=0.093 Sum_probs=126.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
+||+|||+|.||.+||.+|+++||+|++|||++++++.. .+.| ....++. +.+++
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l-----------~~~G-------------~~~~~s~~e~~~~ 61 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASKAEPL-----------TKLG-------------ATVVENAIDAITP 61 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-------CTT-----------TTTT-------------CEECSSGGGGCCT
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-----------HHcC-------------CeEeCCHHHHHhc
Confidence 589999999999999999999999999999999876542 2222 2233444 67899
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccCCCCCEEEEecCCCCCCC--------Cee
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVM--------PLL 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~~r~ig~h~~~p~~~~--------~lv 456 (724)
||+||.|+|.+..+...+...+.+.+.++.+++.. |+..+. +++..+... |.+|.+.|..+ .+.
T Consensus 62 ~dvvi~~l~~~~~~~~v~~~~~~~~~~~~~iiid~-sT~~p~~~~~~~~~~~~~----g~~~ldapVsGg~~~a~~g~l~ 136 (297)
T 4gbj_A 62 GGIVFSVLADDAAVEELFSMELVEKLGKDGVHVSM-STISPETSRQLAQVHEWY----GAHYVGAPIFARPEAVRAKVGN 136 (297)
T ss_dssp TCEEEECCSSHHHHHHHSCHHHHHHHCTTCEEEEC-SCCCHHHHHHHHHHHHHT----TCEEEECCEECCHHHHHHTCCE
T ss_pred CCceeeeccchhhHHHHHHHHHHhhcCCCeEEEEC-CCCChHHHHHHHHHHHhc----CCceecCCcCCCccccccccce
Confidence 99999999977777666667788888888888754 344443 333333221 45555444222 223
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc-----hhhhhhh----hHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG-----FAVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG-----~i~nRl~----~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 525 (724)
-++.| +++++++++++++.+|+.++++++.+| .++|.++ ...+.|++.+.+. |++++++-.++ .+.
T Consensus 137 im~gG---~~~~~~~~~~~l~~~g~~i~~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~ 213 (297)
T 4gbj_A 137 ICLSG---NAGAKERIKPIVENFVKGVFDFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTL 213 (297)
T ss_dssp EEEEE---CHHHHHHHHHHHHTTCSEEEECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTT
T ss_pred eeccc---chhHHHHHHHHHHHhhCCeEEecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 33333 689999999999999999999987665 2445443 2445699988866 99999988888 444
No 101
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.64 E-value=6e-16 Score=163.13 Aligned_cols=191 Identities=12% Similarity=0.122 Sum_probs=132.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
.+||+|||+|.||.++|..|+++|++|++||+++++++...+ .| ....+++. +.++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g------------~~~~~~~~~e~~~ 63 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANLLA-----------EG------------ACGAAASAREFAG 63 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT------------CSEEESSSTTTTT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-----------cC------------CccccCCHHHHHh
Confidence 468999999999999999999999999999999998776432 12 11213444 6679
Q ss_pred CCCEEEEcccCChHHHHHHH--HHHHhhCCCCcEEEecCCCCCHH--HHhcccCC-CCCEEEEecCCCC----CCCCeee
Q 004918 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFSPA----HVMPLLE 457 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~-~~r~ig~h~~~p~----~~~~lve 457 (724)
+||+||+|||++..++..++ +++.+.++++++|++.++..+.+ .+...+.. ...|+. |+.... ..+.+..
T Consensus 64 ~aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 142 (303)
T 3g0o_A 64 VVDALVILVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLD-APVSGGAVKAAQGEMTV 142 (303)
T ss_dssp TCSEEEECCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEE-CCEESCHHHHHTTCEEE
T ss_pred cCCEEEEECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEe-CCCCCChhhhhcCCeEE
Confidence 99999999996655554443 66778888999887544433322 33333322 223444 332111 1123444
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004918 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG------~i~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 525 (724)
++.+ ++++++.++++++.+|+.++++++.+| ++.|.+. ...++|++.+.+. |++++++..++ .+.
T Consensus 143 ~~gg---~~~~~~~~~~ll~~~g~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~ 218 (303)
T 3g0o_A 143 MASG---SEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAA 218 (303)
T ss_dssp EEEC---CHHHHHHHHHHHHHHEEEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTST
T ss_pred EeCC---CHHHHHHHHHHHHHHCCCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 5544 689999999999999999999987555 2334432 3557899988876 89999999998 543
No 102
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.63 E-value=2.7e-16 Score=166.38 Aligned_cols=188 Identities=14% Similarity=0.086 Sum_probs=125.7
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC--HHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~--~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
+.++||+|||+|.||.+||..|+++|+ +|++||++ ++..+.+. +.| +..+++.
T Consensus 22 ~~~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~-----------~~g-------------~~~~~~~ 77 (312)
T 3qsg_A 22 SNAMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAE-----------ELG-------------VSCKASV 77 (312)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHH-----------HTT-------------CEECSCH
T ss_pred CCCCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHH-----------HCC-------------CEEeCCH
Confidence 346799999999999999999999999 99999997 45544321 112 3334454
Q ss_pred -cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-C--CCCEEEEecCCCC--CCCC
Q 004918 383 -SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-S--QDRIIGAHFFSPA--HVMP 454 (724)
Q Consensus 383 -~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~--~~r~ig~h~~~p~--~~~~ 454 (724)
+.+++||+||+|||++... +++.++.+.++++++|++.+|..+.+ .+...+. . ..+|+....+.|+ ..+.
T Consensus 78 ~e~~~~aDvVi~~vp~~~~~--~~~~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~~g~ 155 (312)
T 3qsg_A 78 AEVAGECDVIFSLVTAQAAL--EVAQQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHR 155 (312)
T ss_dssp HHHHHHCSEEEECSCTTTHH--HHHHHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTTGGG
T ss_pred HHHHhcCCEEEEecCchhHH--HHHHhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhhcCC
Confidence 5678999999999976654 46788999999999988766554443 2222221 1 2233332112111 1225
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch-----hhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004918 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI-R 523 (724)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~-----i~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~-~ 523 (724)
+..++.++.+ +.++++++.+|+.++++++.+|. ++|..+. ..++|++.+.+. |++++-++ ++ .
T Consensus 156 l~i~vgg~~~-----~~~~~ll~~~g~~~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~-~l~~ 229 (312)
T 3qsg_A 156 VPLVVDGDGA-----RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLADRVLA-SLDA 229 (312)
T ss_dssp SEEEEESTTH-----HHHHHHHHTTTCEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHH-HHHH
T ss_pred EEEEecCChH-----HHHHHHHHHhCCCeEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHh
Confidence 6667777532 88999999999999999875663 3344433 667899988876 89885444 45 4
Q ss_pred hc
Q 004918 524 SF 525 (724)
Q Consensus 524 ~~ 525 (724)
++
T Consensus 230 ~~ 231 (312)
T 3qsg_A 230 SF 231 (312)
T ss_dssp HS
T ss_pred cC
Confidence 43
No 103
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.63 E-value=6.5e-16 Score=162.25 Aligned_cols=184 Identities=18% Similarity=0.169 Sum_probs=130.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
+||+|||+|.||.++|..|+++|++|++||+++++++.+.+ . .+..++++ +.++
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~- 70 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-----------A-------------GATLADSVADVAA- 70 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-----------T-------------TCEECSSHHHHTT-
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------C-------------CCEEcCCHHHHHh-
Confidence 58999999999999999999999999999999998766432 1 23445565 4466
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccCC-CCCEEEEecCCCC---CCCCeeeEecC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFSPA---HVMPLLEIVRT 461 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~-~~r~ig~h~~~p~---~~~~lveii~~ 461 (724)
||+||+|||++..+ +++++++.+.++++++|++.++..+.+ .+...+.. ..+|+....+.++ ..+.+..++.+
T Consensus 71 aDvvi~~vp~~~~~-~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg 149 (296)
T 3qha_A 71 ADLIHITVLDDAQV-REVVGELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGA 149 (296)
T ss_dssp SSEEEECCSSHHHH-HHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEEC
T ss_pred CCEEEEECCChHHH-HHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecC
Confidence 99999999965554 456688888899999887654443332 33333322 2233332111111 12344555555
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHH------HHHH
Q 004918 462 ERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRI------DSAI 522 (724)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG------~i~nRl~---~~~~~Ea~~l~~~-Gv~~~~I------D~a~ 522 (724)
+++++++++++++.+|+.++++++ +| ++.|.+. ...++|++.+.+. |++++++ ..++
T Consensus 150 ---~~~~~~~~~~ll~~~g~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i 222 (296)
T 3qha_A 150 ---DREVYERIKPAFKHWAAVVIHAGE-PGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDAL 222 (296)
T ss_dssp ---CHHHHHHHHHHHHHHEEEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHHHHHHcCCeEEcCC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHH
Confidence 689999999999999999999976 55 4445443 3457899998876 8999999 7777
No 104
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.63 E-value=5.4e-16 Score=162.21 Aligned_cols=187 Identities=14% Similarity=0.080 Sum_probs=131.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
+||+|||+|.||.++|..|+++|++|++||+++++++...+ . .+..++++ +.+++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-----------~-------------g~~~~~~~~~~~~~ 57 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-----------L-------------GAERAATPCEVVES 57 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-----------T-------------TCEECSSHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-----------C-------------CCeecCCHHHHHhc
Confidence 58999999999999999999999999999999998776432 1 23344555 55788
Q ss_pred CCEEEEcccCChHHHHHHH--HHHHhhCCCCcEEEecCCCCCHH---HHhcccC-CCCCEEEEecCCCC----CCCCeee
Q 004918 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN---IVGEKTS-SQDRIIGAHFFSPA----HVMPLLE 457 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~-~~~r~ig~h~~~p~----~~~~lve 457 (724)
||+||+|||++..++..++ +++.+.++++++|++. |+.++. .+...+. ...+|+. |+..+. ....++.
T Consensus 58 aDvvi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~~-st~~~~~~~~~~~~~~~~g~~~~~-~pv~g~~~~a~~g~l~~ 135 (287)
T 3pef_A 58 CPVTFAMLADPAAAEEVCFGKHGVLEGIGEGRGYVDM-STVDPATSQRIGVAVVAKGGRFLE-APVSGSKKPAEDGTLII 135 (287)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEEC-SCCCHHHHHHHHHHHHHTTCEEEE-CCEECCHHHHHHTCEEE
T ss_pred CCEEEEEcCCHHHHHHHHcCcchHhhcCCCCCEEEeC-CCCCHHHHHHHHHHHHHhCCEEEE-CCCcCCHHHHhcCCEEE
Confidence 9999999997666655444 7788889999888765 444433 2333322 2223444 332211 1123444
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc--h---hhhhhh----hHHHHHHHHHHHc-CCCHHHHHHHH-Hhc
Q 004918 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG--F---AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI-RSF 525 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG--~---i~nRl~----~~~~~Ea~~l~~~-Gv~~~~ID~a~-~~~ 525 (724)
++.+ ++++++.++++++.+|+.++++++ +| . ++|.++ ...++|++.+.+. |++++++..++ .+.
T Consensus 136 ~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~ 210 (287)
T 3pef_A 136 LAAG---DRNLYDEAMPGFEKMGKKIIHLGD-VGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGA 210 (287)
T ss_dssp EEEE---CHHHHHHHHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHST
T ss_pred EEeC---CHHHHHHHHHHHHHhCCCeEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcc
Confidence 5554 689999999999999999999876 44 2 233333 3467899998876 89999999998 543
No 105
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.62 E-value=1.8e-16 Score=165.88 Aligned_cols=186 Identities=13% Similarity=0.125 Sum_probs=129.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+. .+..+++. +.++
T Consensus 1 M~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~------------------------g~~~~~~~~~~~~ 56 (287)
T 3pdu_A 1 MTTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL------------------------GARQASSPAEVCA 56 (287)
T ss_dssp CCCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH------------------------TCEECSCHHHHHH
T ss_pred CCeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC------------------------CCeecCCHHHHHH
Confidence 4689999999999999999999999999999999987764321 13334455 5578
Q ss_pred CCCEEEEcccCChHHHHHHH--HHHHhhCCCCcEEEecCCCCCHH--HHhcccCCCCCEEEEecCCCCCCC--------C
Q 004918 387 DVDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPAHVM--------P 454 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~~~r~ig~h~~~p~~~~--------~ 454 (724)
+||+||+|||++..++..++ +++.+.++++++|++.++..+.+ .+...+... |.||+++|..+ .
T Consensus 57 ~advvi~~v~~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~----g~~~~~~pv~g~~~~a~~g~ 132 (287)
T 3pdu_A 57 ACDITIAMLADPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTAR----GGRFLEAPVSGTKKPAEDGT 132 (287)
T ss_dssp HCSEEEECCSSHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECCEECCHHHHHHTC
T ss_pred cCCEEEEEcCCHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHc----CCEEEECCccCCHHHHhcCC
Confidence 99999999996656554443 66778888888887544433322 233332211 23443333221 2
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-H
Q 004918 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI-R 523 (724)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG------~i~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~-~ 523 (724)
+..++.+ ++++++.++++++.+|+.++++++ +| ++.|.+. ...++|++.+.+. |++++++..++ .
T Consensus 133 l~~~~gg---~~~~~~~~~~ll~~~g~~~~~~g~-~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~ 208 (287)
T 3pdu_A 133 LIILAAG---DQSLFTDAGPAFAALGKKCLHLGE-VGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDA 208 (287)
T ss_dssp EEEEEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred EEEEEeC---CHHHHHHHHHHHHHhCCCEEEcCC-CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 3334443 689999999999999999999976 44 2335443 3456899988866 89999999998 5
Q ss_pred hc
Q 004918 524 SF 525 (724)
Q Consensus 524 ~~ 525 (724)
+.
T Consensus 209 ~~ 210 (287)
T 3pdu_A 209 GA 210 (287)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 106
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=99.62 E-value=9.6e-16 Score=159.30 Aligned_cols=210 Identities=10% Similarity=-0.035 Sum_probs=138.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
.||+|||+|.||.+++..|+++ ++| .+||++++.+++..+. .+. .++++ +.++
T Consensus 3 m~I~iIG~G~mG~~la~~l~~~-~~v~~v~~~~~~~~~~~~~~----------------------~g~--~~~~~~~~~~ 57 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLKDR-YEIGYILSRSIDRARNLAEV----------------------YGG--KAATLEKHPE 57 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHH----------------------TCC--CCCSSCCCCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHHHHH----------------------cCC--ccCCHHHHHh
Confidence 4799999999999999999988 999 5999999887664321 011 23444 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEec----CCCCCC-CCeeeEecC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHF----FSPAHV-MPLLEIVRT 461 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~----~~p~~~-~~lveii~~ 461 (724)
+||+||+|+|++. ..+++.++. .++++|++.+++.+.+.+... .+.+.|+ .+++.. ....++...
T Consensus 58 ~~DvVilav~~~~--~~~v~~~l~---~~~~ivi~~s~~~~~~~l~~~-----~~~~~~p~~~~~g~~~~~~~~~~~~~~ 127 (276)
T 2i76_A 58 LNGVVFVIVPDRY--IKTVANHLN---LGDAVLVHCSGFLSSEIFKKS-----GRASIHPNFSFSSLEKALEMKDQIVFG 127 (276)
T ss_dssp ---CEEECSCTTT--HHHHHTTTC---CSSCCEEECCSSSCGGGGCSS-----SEEEEEECSCC--CTTGGGCGGGCCEE
T ss_pred cCCEEEEeCChHH--HHHHHHHhc---cCCCEEEECCCCCcHHHHHHh-----hccccchhhhcCCCchhHHHhCCCeEE
Confidence 9999999999554 567776654 577888766656677655433 4567774 332221 112222222
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcCC--C------chhhhhhhhHHHHHHHHHHH-cCCCH----------HHHHHHH
Q 004918 462 ERTSAQVILDLMTVGKIIKKVPVVVGNC--T------GFAVNRAFFPYSQSARLLVS-LGVDV----------FRIDSAI 522 (724)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d~--p------G~i~nRl~~~~~~Ea~~l~~-~Gv~~----------~~ID~a~ 522 (724)
-..+++.++.++++++.+|+.++++++. + ++..| ++..++.++..+.. .|++. ..++.++
T Consensus 128 ~~~~~~~~~~~~~l~~~lG~~~~~v~~~~~~~~~~~~~l~~n-~~~~~~~~a~~~~~~~Gl~~~~a~~~~l~~~~~~~~~ 206 (276)
T 2i76_A 128 LEGDERGLPIVKKIAEEISGKYFVIPSEKKKAYHLAAVIASN-FPVALAYLSKRIYTLLGLDEPELLIHTLMKGVADNIK 206 (276)
T ss_dssp ECCCTTTHHHHHHHHHHHCSCEEECCGGGHHHHHHHHHHHHT-THHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHH
Confidence 2235667999999999999999888642 2 34444 55667788877777 58854 3566666
Q ss_pred -Hh-cCCCccHHHHHHhhchHHHHHHHHHHHHhC
Q 004918 523 -RS-FGLPIGPFQLLDLAGYGVAAATSKEFDKAF 554 (724)
Q Consensus 523 -~~-~g~~~Gp~~~~D~~Gld~~~~~~~~l~~~~ 554 (724)
.+ .+.++||++..|..+++.....++.+++++
T Consensus 207 ~~gp~~~~tgP~~r~D~~t~~~~l~~l~~~~~~~ 240 (276)
T 2i76_A 207 KMRVECSLTGPVKRGDWQVVEEERREYEKIFGNT 240 (276)
T ss_dssp HSCGGGGCCSHHHHTCHHHHHHHHHHHHHHHSCC
T ss_pred hcChHhhCCCCcccCCHHHHHHHHHHHhccCccH
Confidence 33 556789999999999999999998875544
No 107
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.60 E-value=2.4e-15 Score=159.68 Aligned_cols=185 Identities=15% Similarity=0.150 Sum_probs=129.6
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
.++||+|||+|.||.++|..|+++|++|++||+++++++...+ .| +..++++ +.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-----------~g-------------~~~~~~~~e~~ 85 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-----------LG-------------ATIHEQARAAA 85 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CEEESSHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-----------CC-------------CEeeCCHHHHH
Confidence 3569999999999999999999999999999999998766421 12 3344555 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH--HHHhhCCCCcEEEecCCCCCHH--HHhcccCCCCCEEEEecCCCCC--------CC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTSSQDRIIGAHFFSPAH--------VM 453 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~~~r~ig~h~~~p~~--------~~ 453 (724)
++||+||+|||++..++ .++. ++.+.++++++|++.+++.+.+ .+...+... |.||++.|. .+
T Consensus 86 ~~aDvVi~~vp~~~~~~-~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~----g~~~~~~pv~g~~~~a~~g 160 (320)
T 4dll_A 86 RDADIVVSMLENGAVVQ-DVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGAL----GIAHLDTPVSGGTVGAEQG 160 (320)
T ss_dssp TTCSEEEECCSSHHHHH-HHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHT----TCEEEECCEECHHHHHHHT
T ss_pred hcCCEEEEECCCHHHHH-HHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHc----CCEEEeCCCcCCHhHHhcC
Confidence 89999999999665554 4444 6777788888887554443322 233333211 234433221 22
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH-
Q 004918 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI- 522 (724)
Q Consensus 454 ~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG------~i~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~- 522 (724)
++..++.+ ++++++.++++++.+ +.++++++ +| ++.|-+. ...++|++.+.+. |++++++..++
T Consensus 161 ~l~i~~gg---~~~~~~~~~~ll~~~-~~~~~~g~-~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~ 235 (320)
T 4dll_A 161 TLVIMAGG---KPADFERSLPLLKVF-GRATHVGP-HGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAIT 235 (320)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHH-EEEEEEES-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHT
T ss_pred CeeEEeCC---CHHHHHHHHHHHHhc-CCEEEeCC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 34555555 689999999999999 88888876 34 2334332 3467899998876 89999999998
Q ss_pred Hhc
Q 004918 523 RSF 525 (724)
Q Consensus 523 ~~~ 525 (724)
.+.
T Consensus 236 ~~~ 238 (320)
T 4dll_A 236 GGF 238 (320)
T ss_dssp TST
T ss_pred ccc
Confidence 544
No 108
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=99.59 E-value=1.2e-14 Score=151.95 Aligned_cols=189 Identities=13% Similarity=0.040 Sum_probs=134.4
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 307 GVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 307 ~~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
.|+||+|||+ |.||.++|..|+++|++|++||++++.++.+.+ .| +..++..+.+
T Consensus 10 mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-----------~g-------------~~~~~~~~~~ 65 (286)
T 3c24_A 10 GPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-----------MG-------------IPLTDGDGWI 65 (286)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-----------TT-------------CCCCCSSGGG
T ss_pred cCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-----------cC-------------CCcCCHHHHh
Confidence 3579999999 999999999999999999999999988765421 12 1223333667
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCC--------CCCe--
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH--------VMPL-- 455 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~--------~~~l-- 455 (724)
++||+||+|+| .....++++++.+.++++++|++.+++.+++.+.. .....++++.||+.|.. ....
T Consensus 66 ~~aDvVi~av~--~~~~~~v~~~l~~~l~~~~ivv~~s~~~~~~~l~~-~~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l 142 (286)
T 3c24_A 66 DEADVVVLALP--DNIIEKVAEDIVPRVRPGTIVLILDAAAPYAGVMP-ERADITYFIGHPCHPPLFNDETDPAARTDYH 142 (286)
T ss_dssp GTCSEEEECSC--HHHHHHHHHHHGGGSCTTCEEEESCSHHHHHTCSC-CCTTSEEEEEEECCSCSSCCCCSHHHHTCSS
T ss_pred cCCCEEEEcCC--chHHHHHHHHHHHhCCCCCEEEECCCCchhHHHHh-hhCCCeEEecCCCCccccccccchhhccCcc
Confidence 89999999999 45578899999999999999988666666665554 33335799999988765 2222
Q ss_pred ------eeEecCCCCCHHHHHHHHHHHHHcCC---eeEEEcC-CCchh----hhhhhhHHH---HHHHHHH-Hc-CCCHH
Q 004918 456 ------LEIVRTERTSAQVILDLMTVGKIIKK---VPVVVGN-CTGFA----VNRAFFPYS---QSARLLV-SL-GVDVF 516 (724)
Q Consensus 456 ------veii~~~~t~~e~~~~~~~l~~~lGk---~~v~v~d-~pG~i----~nRl~~~~~---~Ea~~l~-~~-Gv~~~ 516 (724)
..++.+..++++.++.++++++.+|+ .++++++ ..+.+ .|-...+++ .|++... .. |++++
T Consensus 143 ~~~~~~~~i~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~ 222 (286)
T 3c24_A 143 GGIAKQAIVCALMQGPEEHYAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQ 222 (286)
T ss_dssp SSSSCEEEEEEEEESCTHHHHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHH
T ss_pred cccccceeeeeccCCCHHHHHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 23333334688999999999999999 7888853 22222 343433333 3544333 33 88887
Q ss_pred HHHHHH
Q 004918 517 RIDSAI 522 (724)
Q Consensus 517 ~ID~a~ 522 (724)
++-.++
T Consensus 223 ~~~~~~ 228 (286)
T 3c24_A 223 AALDFM 228 (286)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776665
No 109
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=99.59 E-value=2.2e-15 Score=150.19 Aligned_cols=159 Identities=9% Similarity=0.014 Sum_probs=124.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+.+||+|||+|.||+++|..|.++|++|++||+. ++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~------------------------------------------~~~~ 42 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP------------------------------------------EDIR 42 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG------------------------------------------GGGG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH------------------------------------------HHhc
Confidence 3468999999999999999999999999999983 1245
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeeeEecCCCCCH
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLEIVRTERTSA 466 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lveii~~~~t~~ 466 (724)
+|| |.|||.+ ...+++.++.+.++++++|++.+++.+...+........+|++.||.... ..++... ++
T Consensus 43 ~aD--ilavP~~--ai~~vl~~l~~~l~~g~ivvd~sgs~~~~vl~~~~~~g~~fvg~HPm~g~-----~~~i~a~--d~ 111 (232)
T 3dfu_A 43 DFE--LVVIDAH--GVEGYVEKLSAFARRGQMFLHTSLTHGITVMDPLETSGGIVMSAHPIGQD-----RWVASAL--DE 111 (232)
T ss_dssp GCS--EEEECSS--CHHHHHHHHHTTCCTTCEEEECCSSCCGGGGHHHHHTTCEEEEEEEEETT-----EEEEEES--SH
T ss_pred cCC--EEEEcHH--HHHHHHHHHHHhcCCCCEEEEECCcCHHHHHHHHHhCCCcEEEeeeCCCC-----ceeeeCC--CH
Confidence 788 8899955 56788899999999999998766566655454444556789999986432 2233322 78
Q ss_pred HHHHHHHHHHHHcCCeeEEEc--CCCch----hhhhhhhHHHHHHHHHH---HcCC-CHHHH
Q 004918 467 QVILDLMTVGKIIKKVPVVVG--NCTGF----AVNRAFFPYSQSARLLV---SLGV-DVFRI 518 (724)
Q Consensus 467 e~~~~~~~l~~~lGk~~v~v~--d~pG~----i~nRl~~~~~~Ea~~l~---~~Gv-~~~~I 518 (724)
+.++.++++++.+|.+++.+. +.++| ..++.+.++.++|..++ ++|+ +++|+
T Consensus 112 ~a~~~l~~L~~~lG~~vv~~~~~~hd~~~AAvsh~nhLv~L~~~A~~ll~~~~~g~a~~~d~ 173 (232)
T 3dfu_A 112 LGETIVGLLVGELGGSIVEIADDKRAQLAAALTYAGFLSTLQRDASYFLDEFLGDPDVTSDI 173 (232)
T ss_dssp HHHHHHHHHHHHTTCEECCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEEeCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChhhh
Confidence 899999999999999999984 45666 44677788999999999 8897 88883
No 110
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=99.56 E-value=2.6e-14 Score=151.88 Aligned_cols=188 Identities=13% Similarity=0.064 Sum_probs=135.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC----CcEEEEeCCHH--HHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSE--YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G----~~V~l~d~~~~--~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (724)
++||+|||+|.||.+||..|+++| ++|++|||+++ +++.+.+ .| +..+++
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~-----------~G-------------~~~~~~ 77 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRK-----------MG-------------VKLTPH 77 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHH-----------HT-------------CEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHH-----------cC-------------CEEeCC
Confidence 458999999999999999999999 89999999986 5554321 12 223334
Q ss_pred c-cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCC---CCCEEEEecCCCCCCCCeee
Q 004918 382 Y-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSS---QDRIIGAHFFSPAHVMPLLE 457 (724)
Q Consensus 382 ~-~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~---~~r~ig~h~~~p~~~~~lve 457 (724)
. +.+++||+||+||| ++...+++.++.+.++++++|++.++++++..+...+.. ..++++.|+..|........
T Consensus 78 ~~e~~~~aDvVilav~--~~~~~~vl~~l~~~l~~~~ivvs~s~gi~~~~l~~~l~~~~~~~~vv~~~p~~p~~~~~g~~ 155 (322)
T 2izz_A 78 NKETVQHSDVLFLAVK--PHIIPFILDEIGADIEDRHIVVSCAAGVTISSIEKKLSAFRPAPRVIRCMTNTPVVVREGAT 155 (322)
T ss_dssp HHHHHHHCSEEEECSC--GGGHHHHHHHHGGGCCTTCEEEECCTTCCHHHHHHHHHTTSSCCEEEEEECCGGGGGTCEEE
T ss_pred hHHHhccCCEEEEEeC--HHHHHHHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHhhcCCCCeEEEEeCCcHHHHcCCeE
Confidence 3 56788999999999 677888999999989889999998888888776665532 45799999988887766555
Q ss_pred Ee-cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc----h--hhhhhhhHHHHHHHH--HHHcCCCHHHHHHHH
Q 004918 458 IV-RTERTSAQVILDLMTVGKIIKKVPVVVGNCTG----F--AVNRAFFPYSQSARL--LVSLGVDVFRIDSAI 522 (724)
Q Consensus 458 ii-~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG----~--i~nRl~~~~~~Ea~~--l~~~Gv~~~~ID~a~ 522 (724)
++ .++.++++.++.++++++.+|..+++..+.-. . ..+.+++ .+.|++. ..+.|+++++.-.++
T Consensus 156 v~~~g~~~~~~~~~~v~~ll~~~G~~~~~~e~~~~~~~a~~g~gpa~~~-~~~eala~a~~~~Gl~~~~a~~l~ 228 (322)
T 2izz_A 156 VYATGTHAQVEDGRLMEQLLSSVGFCTEVEEDLIDAVTGLSGSGPAYAF-TALDALADGGVKMGLPRRLAVRLG 228 (322)
T ss_dssp EEEECTTCCHHHHHHHHHHHHTTEEEEECCGGGHHHHHHHTTTHHHHHH-HHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHhCCCEEEeCHHHHHHHHHHhcCHHHHHH-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 55 57777899999999999999986554322110 0 1122222 2234333 345588887766655
No 111
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=99.55 E-value=1.5e-15 Score=157.92 Aligned_cols=93 Identities=24% Similarity=0.314 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCC-CCCCCHHH
Q 004918 622 EIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGN-FFKPSRFL 700 (724)
Q Consensus 622 ~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~-~~~p~~~l 700 (724)
+++||++.++++||+.++++|+ ++++||.++..|+|+|++..|||+++|.+|+|+++++++.+++.+++ +|.|+++|
T Consensus 174 fi~Nrll~~~~~EA~~l~~~Gv--~~e~id~~~~~g~g~~~~~~GP~~l~D~~Gld~~~~~~~~l~~~~~~~~~~~~~~l 251 (293)
T 1zej_A 174 SLVNRFNAAVLSEASRMIEEGV--RAEDVDRVWKHHLGLLYTLFGPLGNLDYIGLDVAYYASLYLYKRFGDEKFKPPEWL 251 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTC--CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCGGGSCCHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhCC--CHHHHHHHHHhcCCCCCCCCCHHHHHHHhchHHHHHHHHHHHHHcCCCcCCCCHHH
Confidence 8999999999999999999998 79999999999999988788999999999999999999999999887 89999999
Q ss_pred HHHH-------HcCCCCCCCCCC
Q 004918 701 EERA-------TKGIPLSAPVSS 716 (724)
Q Consensus 701 ~~~~-------k~g~gfy~~~~~ 716 (724)
++|+ |+|+|||+|++.
T Consensus 252 ~~~v~~G~lG~Ktg~Gfy~y~~~ 274 (293)
T 1zej_A 252 QEKIKKGEVGVKAGKGIYEYGPK 274 (293)
T ss_dssp HHHHHTTCCBGGGTBSSSBCCTT
T ss_pred HHHHHCCCCccccCCEeeecCcc
Confidence 9999 789999999553
No 112
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=99.54 E-value=8.7e-15 Score=154.14 Aligned_cols=90 Identities=27% Similarity=0.372 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhh-CC-CCCCC
Q 004918 620 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLY-GN-FFKPS 697 (724)
Q Consensus 620 ~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~-~~-~~~p~ 697 (724)
++++.||++.+++||+++++++|++ ++++||.++..|+|||+ |||+++|.+|+|+++++++.+++.+ ++ +|.|+
T Consensus 203 ~g~i~nr~l~~~~~Ea~~l~~~g~~-~~~~id~~~~~g~g~p~---GP~~~~D~~Gld~~~~~~~~l~~~~~~~~~~~~~ 278 (302)
T 1f0y_A 203 PGFIVNRLLVPYLMEAIRLYERGDA-SKEDIDTAMKLGAGYPM---GPFELLDYVGLDTTKFIVDGWHEMDAENPLHQPS 278 (302)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHHHHHTTTTCGGGCCC
T ss_pred ccccHHHHHHHHHHHHHHHHHcCCC-CHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHHHHHccCCCccCcC
Confidence 4689999999999999999999999 99999999999999996 9999999999999999999999888 76 59999
Q ss_pred HHHHHHH-------HcCCCCCCC
Q 004918 698 RFLEERA-------TKGIPLSAP 713 (724)
Q Consensus 698 ~~l~~~~-------k~g~gfy~~ 713 (724)
++|++|+ |+|+|||+|
T Consensus 279 ~~l~~~~~~g~~G~k~g~Gfy~y 301 (302)
T 1f0y_A 279 PSLNKLVAENKFGKKTGEGFYKY 301 (302)
T ss_dssp HHHHHHHHTTCCBTTTTBSSSBC
T ss_pred HHHHHHHHcCCCccccCcEeeeC
Confidence 9999999 789999999
No 113
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=99.53 E-value=2.7e-14 Score=159.19 Aligned_cols=205 Identities=13% Similarity=0.079 Sum_probs=143.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHH--hhcCcccccCc-cC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN--ALKMLKGVLDY-SE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~--~~~~i~~~~~~-~~ 384 (724)
-.||+|||+|.||.++|..|+++|++|++||+++++++...+.... ....| + .+.... ..+++.+++++ ++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~----i~e~g-l-~~~l~~~~~~~~l~~ttd~~~a 81 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVP----IHEPG-L-KEVIARNRSAGRLRFSTDIEAA 81 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCS----SCCTT-H-HHHHHHHHHTTCEEEECCHHHH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCC----cCCCC-H-HHHHHHhcccCCEEEECCHHHH
Confidence 3689999999999999999999999999999999988875431000 00000 0 000110 12467888888 57
Q ss_pred cCCCCEEEEcccC--------ChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccC----CC---CCEEEEec
Q 004918 385 FKDVDMVIEAVIE--------SVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQ---DRIIGAHF 446 (724)
Q Consensus 385 ~~~aDlVIeav~e--------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~----~~---~r~ig~h~ 446 (724)
+++||+||+|||. |.....++++++.++++++++|++ .|++++. .+...+. .+ ..+ .+.
T Consensus 82 ~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~-~STv~~gt~~~l~~~l~~~~~~g~~~~~~--~v~ 158 (478)
T 2y0c_A 82 VAHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVD-KSTVPVGTAERVRAAVAEELAKRGGDQMF--SVV 158 (478)
T ss_dssp HHHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHHHHTTCCCCE--EEE
T ss_pred hhcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEE-eCCcCCCchHHHHHHHHHHhcCCCCCccE--EEE
Confidence 8999999999997 448889999999999999998864 4566542 2222111 11 222 245
Q ss_pred CCCCCCCCee---------eEecCCCCCH----HHHHHHHHHHHHcCC--eeEEEcC-----CCchhhhhhh---hHHHH
Q 004918 447 FSPAHVMPLL---------EIVRTERTSA----QVILDLMTVGKIIKK--VPVVVGN-----CTGFAVNRAF---FPYSQ 503 (724)
Q Consensus 447 ~~p~~~~~lv---------eii~~~~t~~----e~~~~~~~l~~~lGk--~~v~v~d-----~pG~i~nRl~---~~~~~ 503 (724)
++|....+.. .++.|.. ++ ++.+.+.++++.+++ .++++.+ ..+++.|.++ .+++|
T Consensus 159 ~~Pe~~~eG~~~~~~~~p~~iviG~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~n 237 (478)
T 2y0c_A 159 SNPEFLKEGAAVDDFTRPDRIVIGCD-DDVPGERARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMN 237 (478)
T ss_dssp ECCCCCCTTCHHHHHHSCSCEEEECC-SSHHHHHHHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EChhhhcccceeeccCCCCEEEEEEC-CCcccHHHHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5676665544 3555543 34 789999999998875 5677654 4457778765 57889
Q ss_pred HHHHHHHc-CCCHHHHHHHH
Q 004918 504 SARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 504 Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
|+..+.+. |++++++..++
T Consensus 238 E~~~la~~~Gid~~~v~~~i 257 (478)
T 2y0c_A 238 ELANLADRFGADIEAVRRGI 257 (478)
T ss_dssp HHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHH
Confidence 99999877 89999999887
No 114
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.52 E-value=1.7e-13 Score=145.02 Aligned_cols=193 Identities=12% Similarity=0.065 Sum_probs=127.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccc-cCccCc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~ 385 (724)
++||+|||+|.||.++|..|+++| ++|++||++++..++..+..+ ...+.| + .+ +..+.+
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~----~~~~~g-------------~-~~~s~~e~~ 85 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRA----RAAELG-------------V-EPLDDVAGI 85 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHH----HHHHTT-------------C-EEESSGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHH----HHHHCC-------------C-CCCCHHHHH
Confidence 468999999999999999999999 999999999842211111111 111222 1 23 334678
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCC--CCCCCeeeEec
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP--AHVMPLLEIVR 460 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p--~~~~~lveii~ 460 (724)
++||+||+|||.+... +.+.++.+.++++++|++.++..+.+ .+...+. ...+|+....+.| ...+.+..++.
T Consensus 86 ~~aDvVi~avp~~~~~--~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~~~a~~g~l~i~vg 163 (317)
T 4ezb_A 86 ACADVVLSLVVGAATK--AVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVA 163 (317)
T ss_dssp GGCSEEEECCCGGGHH--HHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSCSTTTGGGSEEEEE
T ss_pred hcCCEEEEecCCHHHH--HHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCCchhhcCCEEEEEe
Confidence 9999999999965544 45588888899999887655443332 3333332 2234544322332 23445566666
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch-----hhhhh----hhHHHHHHHHHHHc-CCCHHHHHHHHHhc
Q 004918 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRA----FFPYSQSARLLVSL-GVDVFRIDSAIRSF 525 (724)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~-----i~nRl----~~~~~~Ea~~l~~~-Gv~~~~ID~a~~~~ 525 (724)
++. + +.++++++.+|+.++++++.+|. ++|.+ ..+.++|++.+.+. |++++.++.+..+.
T Consensus 164 g~~---~--~~~~~ll~~~g~~v~~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~~~~~l~~~~ 233 (317)
T 4ezb_A 164 GRR---A--VEVAERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTERILDSVQETF 233 (317)
T ss_dssp STT---H--HHHHHHHHTTTCEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHS
T ss_pred CCh---H--HHHHHHHHHhCCCeEEeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcC
Confidence 653 2 88999999999999999876662 33332 35677899998876 89986666655443
No 115
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=99.51 E-value=3.2e-14 Score=151.14 Aligned_cols=160 Identities=14% Similarity=0.153 Sum_probs=118.6
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
.++||+|||+|.||++||..|.++|++|++||++++.++.+.+ .| +..+++. +.+
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~-----------~G-------------~~~~~~~~e~~ 62 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVD-----------EG-------------FDVSADLEATL 62 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHH-----------TT-------------CCEESCHHHHH
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeeeCCHHHHH
Confidence 4678999999999999999999999999999999988776431 22 1223343 233
Q ss_pred ----CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccCCCCCEEEEecCCCCC-C------
Q 004918 386 ----KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH-V------ 452 (724)
Q Consensus 386 ----~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~-~------ 452 (724)
++||+||+||| +....++++++.+. +++++|++.+|+.. +..+..... ..+|++.||...+. .
T Consensus 63 ~~a~~~aDlVilavP--~~~~~~vl~~l~~~-~~~~iv~Dv~Svk~~i~~~~~~~~~-~~~~v~~HPmaG~e~sG~~aa~ 138 (341)
T 3ktd_A 63 QRAAAEDALIVLAVP--MTAIDSLLDAVHTH-APNNGFTDVVSVKTAVYDAVKARNM-QHRYVGSHPMAGTANSGWSASM 138 (341)
T ss_dssp HHHHHTTCEEEECSC--HHHHHHHHHHHHHH-CTTCCEEECCSCSHHHHHHHHHTTC-GGGEECEEECCSCC-CCGGGCC
T ss_pred HhcccCCCEEEEeCC--HHHHHHHHHHHHcc-CCCCEEEEcCCCChHHHHHHHHhCC-CCcEecCCccccccccchhhhh
Confidence 35799999999 67788999999887 78888876555432 234444332 46899999987653 1
Q ss_pred -----CCeeeEecCCCCCHH--------HHHHHHHHHHHcCCeeEEEc-CCCchhh
Q 004918 453 -----MPLLEIVRTERTSAQ--------VILDLMTVGKIIKKVPVVVG-NCTGFAV 494 (724)
Q Consensus 453 -----~~lveii~~~~t~~e--------~~~~~~~l~~~lGk~~v~v~-d~pG~i~ 494 (724)
+..+.+++++.++++ .++.++++++.+|..++++. +....++
T Consensus 139 ~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~~v~~l~~~~Ga~v~~~~~~~HD~~~ 194 (341)
T 3ktd_A 139 DGLFKRAVWVVTFDQLFDGTDINSTWISIWKDVVQMALAVGAEVVPSRVGPHDAAA 194 (341)
T ss_dssp SSTTTTCEEEECCGGGTSSCCCCHHHHHHHHHHHHHHHHTTCEEEECCHHHHHHHH
T ss_pred hHHhcCCeEEEEeCCCCChhhhccchHHHHHHHHHHHHHcCCEEEEeCHHHHHHHH
Confidence 234667788888888 99999999999999999884 3344333
No 116
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=99.51 E-value=2.3e-13 Score=140.18 Aligned_cols=148 Identities=12% Similarity=0.093 Sum_probs=115.4
Q ss_pred eEEEEcCCCCcHHHHHHHHHCC-CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 310 KVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
||+|||+|.||.++|..|+++| ++|++||+++++++...+. .| +..+++. +.+ +
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~----------~g-------------~~~~~~~~~~~-~ 57 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE----------LG-------------VETSATLPELH-S 57 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH----------TC-------------CEEESSCCCCC-T
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHh----------cC-------------CEEeCCHHHHh-c
Confidence 7999999999999999999999 9999999999887764321 01 2233444 567 9
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCC-eeeEecCCCCCH
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTSA 466 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveii~~~~t~~ 466 (724)
||+||+|+| .....+++.++.+ + +++|++.++++++..+...+....+++..++..|..... ...++++..+++
T Consensus 58 ~D~vi~~v~--~~~~~~v~~~l~~--~-~~ivv~~~~g~~~~~l~~~~~~~~~~v~~~~~~~~~~~~g~~~i~~~~~~~~ 132 (263)
T 1yqg_A 58 DDVLILAVK--PQDMEAACKNIRT--N-GALVLSVAAGLSVGTLSRYLGGTRRIVRVMPNTPGKIGLGVSGMYAEAEVSE 132 (263)
T ss_dssp TSEEEECSC--HHHHHHHHTTCCC--T-TCEEEECCTTCCHHHHHHHTTSCCCEEEEECCGGGGGTCEEEEEECCTTSCH
T ss_pred CCEEEEEeC--chhHHHHHHHhcc--C-CCEEEEecCCCCHHHHHHHcCCCCcEEEEcCCHHHHHcCceEEEEcCCCCCH
Confidence 999999999 6666777776654 4 888989889999888877776555788886555555544 345677777899
Q ss_pred HHHHHHHHHHHHcCCeeEEEc
Q 004918 467 QVILDLMTVGKIIKKVPVVVG 487 (724)
Q Consensus 467 e~~~~~~~l~~~lGk~~v~v~ 487 (724)
+.++.+.++++.+|+.+ +++
T Consensus 133 ~~~~~~~~l~~~~g~~~-~~~ 152 (263)
T 1yqg_A 133 TDRRIADRIMKSVGLTV-WLD 152 (263)
T ss_dssp HHHHHHHHHHHTTEEEE-ECS
T ss_pred HHHHHHHHHHHhCCCEE-EeC
Confidence 99999999999999876 666
No 117
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.51 E-value=4e-14 Score=149.28 Aligned_cols=187 Identities=11% Similarity=0.038 Sum_probs=128.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
.++||+|||+|.||.++|..|+++|++|++||+++++++.+.+ .| +...++. +.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~~~e~~ 63 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVA-----------AG-------------AHLCESVKAAL 63 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH-----------HT-------------CEECSSHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHH
Confidence 3578999999999999999999999999999999998776432 12 2233444 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH--HHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCC-CCC--CCeee
Q 004918 386 KDVDMVIEAVIESVPLKQKIFS--ELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSP-AHV--MPLLE 457 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~--~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p-~~~--~~lve 457 (724)
++||+||+|+|++..++ .++. .+... .++++|++.++..+.. .+...+. ...+|+....+.+ +.. ..+..
T Consensus 64 ~~aDvVi~~vp~~~~~~-~v~~~~~l~~~-~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i 141 (306)
T 3l6d_A 64 SASPATIFVLLDNHATH-EVLGMPGVARA-LAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHS 141 (306)
T ss_dssp HHSSEEEECCSSHHHHH-HHHTSTTHHHH-TTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEE
T ss_pred hcCCEEEEEeCCHHHHH-HHhcccchhhc-cCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEE
Confidence 88999999999665554 4444 56554 5777776544433322 3333332 2334555432221 111 12343
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEE--cC--CCchhhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 458 IVRTERTSAQVILDLMTVGKIIKKVPVVV--GN--CTGFAVNRAF---FPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v--~d--~pG~i~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
++.+ +++++++++++++.+|++++++ ++ ..|..++-++ ...++|++.+.+. |++++++..++
T Consensus 142 ~~gg---~~~~~~~~~~ll~~lg~~~~~~~~g~~~g~g~~~k~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~ 211 (306)
T 3l6d_A 142 IHTG---DREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFGLPVSKTARLL 211 (306)
T ss_dssp EEEE---CHHHHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEcC---CHHHHHHHHHHHHHhcCCEEEecCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4444 6999999999999998899999 75 4567776332 3556799988866 89999998888
No 118
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=99.51 E-value=5.7e-14 Score=155.30 Aligned_cols=203 Identities=16% Similarity=0.156 Sum_probs=135.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CC-cEEEEeCCHH----HHHHHHHHH------HHHHHhhHhcCCCCHHHHHHhhc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSE----YLLKGIKTI------EANVRGLVTRGKLTQDKANNALK 374 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~-G~-~V~l~d~~~~----~~~~~~~~i------~~~~~~~~~~g~~~~~~~~~~~~ 374 (724)
+++||+|||+|.||.++|.+|+++ |+ +|++||++++ +++...+.. +..++.++++ ....+
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~--------~~~~g 88 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGK--------VVKAG 88 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHH--------HHHTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHh--------hcccC
Confidence 467999999999999999999999 99 9999999999 777643210 0000000000 00136
Q ss_pred CcccccCccCcCCCCEEEEcccCCh----------HHHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhc-----ccC
Q 004918 375 MLKGVLDYSEFKDVDMVIEAVIESV----------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGE-----KTS 436 (724)
Q Consensus 375 ~i~~~~~~~~~~~aDlVIeav~e~~----------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~-----~~~ 436 (724)
++.++++.+++++||+||+|||++. .......+.+.++++++++|+ +.||+++. ++.. ...
T Consensus 89 ~l~~ttd~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV-~~STv~pgtt~~v~~~ile~~~g 167 (478)
T 3g79_A 89 KFECTPDFSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVV-LESTITPGTTEGMAKQILEEESG 167 (478)
T ss_dssp CEEEESCGGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEE-ECSCCCTTTTTTHHHHHHHHHHC
T ss_pred CeEEeCcHHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEE-EeCCCChHHHHHHHHHHHHHhcC
Confidence 7888888888999999999998753 345666788999999999876 44555543 2221 111
Q ss_pred C--CCCEEEEecCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcCCCc----hhhhhhh--
Q 004918 437 S--QDRIIGAHFFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKII-KKVPVVVGNCTG----FAVNRAF-- 498 (724)
Q Consensus 437 ~--~~r~ig~h~~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~l-Gk~~v~v~d~pG----~i~nRl~-- 498 (724)
. ...|.-+ ++|....+.- -|+.|. +++..+.++++++.+ ++.++++++... .++|.++
T Consensus 168 ~~~~~d~~v~--~~Pe~~~~G~a~~~~~~~~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a 243 (478)
T 3g79_A 168 LKAGEDFALA--HAPERVMVGRLLKNIREHDRIVGGI--DEASTKRAVELYSPVLTVGQVIPMSATAAEVTKTAENTFRD 243 (478)
T ss_dssp CCBTTTBEEE--ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHH
T ss_pred CCcCCceeEE--eCCccCCccchhhhhcCCcEEEEeC--CHHHHHHHHHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHH
Confidence 1 1112111 2444333211 245443 688889999999999 888888865221 2333332
Q ss_pred --hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 499 --FPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 499 --~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
.+++||+..+.+. |+++.++-.++
T Consensus 244 ~~Ia~~nE~~~l~e~~GiD~~~v~~~~ 270 (478)
T 3g79_A 244 LQIAAINQLALYCEAMGINVYDVRTGV 270 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 4778999988876 99999988888
No 119
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=99.50 E-value=2.7e-14 Score=151.42 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=133.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
.++||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +...++. +.+
T Consensus 29 ~~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~ 84 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ-----------EG-------------ARLGRTPAEVV 84 (316)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH-----------TT-------------CEECSCHHHHH
T ss_pred CCCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------cC-------------CEEcCCHHHHH
Confidence 3578999999999999999999999999999999987665321 12 1223344 557
Q ss_pred CCCCEEEEcccCChHHHHHHHHH---HHhhCCCCcEEEecCCCCC--HHHHhcccC-CCCCEEEEecCCCC---CCCCee
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~---l~~~~~~~~ii~s~ts~~~--~~~~~~~~~-~~~r~ig~h~~~p~---~~~~lv 456 (724)
+++|+||+|+|++..++. ++.+ +.+.+.++++|++.++..+ ..++.+.+. ...++++.++++.+ ..+.++
T Consensus 85 ~~~DvVi~av~~~~~~~~-v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~ 163 (316)
T 2uyy_A 85 STCDITFACVSDPKAAKD-LVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLV 163 (316)
T ss_dssp HHCSEEEECCSSHHHHHH-HHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEE
T ss_pred hcCCEEEEeCCCHHHHHH-HHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEE
Confidence 889999999996665544 4443 3366778888775444332 334555442 45578887765432 334556
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc------hhhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG------FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG------~i~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
.++.+ +++.++.+.++++.+|+.++++++ +| ++.|.+ +..++.|++.+.+. |+++++++.++
T Consensus 164 ~~~~g---~~~~~~~v~~ll~~~g~~~~~~~~-~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~ 235 (316)
T 2uyy_A 164 ILAAG---DRGLYEDCSSCFQAMGKTSFFLGE-VGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDIL 235 (316)
T ss_dssp EEEEE---CHHHHHHTHHHHHHHEEEEEECSS-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEeCC---CHHHHHHHHHHHHHhcCCEEEeCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 66666 588999999999999999988866 33 455665 45677899988765 89999999888
No 120
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.49 E-value=1.4e-13 Score=144.02 Aligned_cols=159 Identities=14% Similarity=0.104 Sum_probs=119.8
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (724)
|+++||+|||+|.||.++|..|+++ |++|++||++++.++.+.+ .|... ..++++
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~-----------~g~~~-----------~~~~~~~ 61 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE-----------RGIVD-----------EATADFK 61 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH-----------TTSCS-----------EEESCTT
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH-----------cCCcc-----------cccCCHH
Confidence 3467999999999999999999988 6899999999988765421 22110 223444
Q ss_pred cCcCCCCEEEEcccCChHHHHHHHHHHHhh-CCCCcEEEecCCCCC--HHHHhcccCC-CCCEEEEecC------CCCC-
Q 004918 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKA-CPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFF------SPAH- 451 (724)
Q Consensus 383 ~~~~~aDlVIeav~e~~~~k~~v~~~l~~~-~~~~~ii~s~ts~~~--~~~~~~~~~~-~~r~ig~h~~------~p~~- 451 (724)
+.+++||+||+||| .....+++.++.+. ++++++|++.+++.. ...+...+.. ..++++.||+ .|..
T Consensus 62 ~~~~~aDvVilavp--~~~~~~v~~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a 139 (290)
T 3b1f_A 62 VFAALADVIILAVP--IKKTIDFIKILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAA 139 (290)
T ss_dssp TTGGGCSEEEECSC--HHHHHHHHHHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSC
T ss_pred HhhcCCCEEEEcCC--HHHHHHHHHHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHh
Confidence 56789999999999 55568899999888 888988875444322 2455555544 5689999987 4432
Q ss_pred -----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 452 -----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 452 -----~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
.+..+.+++...++++.++.+.++++.+|..++++.+
T Consensus 140 ~~~l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~G~~~~~~~~ 181 (290)
T 3b1f_A 140 NVNLFENAYYIFSPSCLTKPNTIPALQDLLSGLHARYVEIDA 181 (290)
T ss_dssp CTTTTTTSEEEEEECTTCCTTHHHHHHHHTGGGCCEEEECCH
T ss_pred hHHHhCCCeEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3455778888888899999999999999999888753
No 121
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.48 E-value=5.1e-14 Score=150.94 Aligned_cols=174 Identities=10% Similarity=0.043 Sum_probs=119.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
.+||+|||+|.||.++|..|+++|++|++||+++++++.+.+ .| +..++++ +.++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g-------------~~~~~s~~e~~~ 77 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-----------EG-------------IAGARSIEEFCA 77 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CEEeCCHHHHHh
Confidence 468999999999999999999999999999999998776431 12 2334444 4456
Q ss_pred CC---CEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCCC---CCCCeee
Q 004918 387 DV---DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (724)
Q Consensus 387 ~a---DlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lve 457 (724)
++ |+||.|||.+ ...+++.++.+.++++++|++.+++.+.+ .+...+. ...+|+....+.++ ..++ .
T Consensus 78 ~a~~~DvVi~~vp~~--~v~~vl~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~--~ 153 (358)
T 4e21_A 78 KLVKPRVVWLMVPAA--VVDSMLQRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY--C 153 (358)
T ss_dssp HSCSSCEEEECSCGG--GHHHHHHHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC--E
T ss_pred cCCCCCEEEEeCCHH--HHHHHHHHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC--e
Confidence 67 9999999966 56678899999999999998766665443 3333332 22334443222111 1122 2
Q ss_pred EecCCCCCHHHHHHHHHHHHHcC--------------------CeeEEEcC-CCchhh---hh-hh---hHHHHHHHHHH
Q 004918 458 IVRTERTSAQVILDLMTVGKIIK--------------------KVPVVVGN-CTGFAV---NR-AF---FPYSQSARLLV 509 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lG--------------------k~~v~v~d-~pG~i~---nR-l~---~~~~~Ea~~l~ 509 (724)
++.+. ++++++.++++++.+| +.++++++ ..|..+ |. ++ ...+.|++.++
T Consensus 154 im~GG--~~~a~~~~~~ll~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la 231 (358)
T 4e21_A 154 LMIGG--EKQAVERLDPVFRTLAPGIGAAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNIL 231 (358)
T ss_dssp EEEES--CHHHHHHTHHHHHHHSCCGGGSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeecC--CHHHHHHHHHHHHHhccccccCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34432 6899999999999999 56788875 344443 22 22 24456999888
Q ss_pred Hc
Q 004918 510 SL 511 (724)
Q Consensus 510 ~~ 511 (724)
+.
T Consensus 232 ~~ 233 (358)
T 4e21_A 232 HH 233 (358)
T ss_dssp HT
T ss_pred Hh
Confidence 76
No 122
>2f9y_B Acetyl-coenzyme A carboxylase carboxyl transferas beta; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.47 E-value=9.3e-14 Score=144.38 Aligned_cols=156 Identities=17% Similarity=0.154 Sum_probs=124.0
Q ss_pred EEEEeCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHH
Q 004918 16 AIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLI 94 (724)
Q Consensus 16 ~~i~l~~p-~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (724)
+++..+.. ..|+++..+.+.+.++++.+.++ .+++|+|++.| |+|+.+.... + .....++ ..+
T Consensus 121 ~v~a~d~~~~ggslg~~~~~Ki~r~~e~A~~~-~~PvI~l~~sG-----Garlqeg~~~--------l-~~~~~i~-~al 184 (304)
T 2f9y_B 121 VAAAFEFAFMGGSMGSVVGARFVRAVEQALED-NCPLICFSASG-----GARMQEALMS--------L-MQMAKTS-AAL 184 (304)
T ss_dssp BEEEECTTSTTTCBCTHHHHHHHHHHHHHHHH-TCCEEEEEEES-----SBCGGGTHHH--------H-HHHHHHH-HHH
T ss_pred EEEEEcCccccCCCCHHHHHHHHHHHHHHHhC-CCCEEEEECCC-----CcCHHHHHHH--------H-HHHHHHH-HHH
Confidence 33334333 35999999999999999999988 89999999876 8888654310 1 1222333 334
Q ss_pred ---hcCCCcEEEEECccccchh-HHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCC
Q 004918 95 ---EDCKKPIVAAVEGLALGGG-LELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSIT 170 (724)
Q Consensus 95 ---~~~~kp~Iaav~G~a~GgG-~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~ 170 (724)
...++|+|++|+|.|+||| +.++++||++||.++|+|++. +...+++.+|.. ++++..+
T Consensus 185 ~~~~~~~vP~IavV~G~~~GGg~a~~a~~~D~via~~~A~i~v~-----------Gp~~i~~~ig~~------l~~~~~~ 247 (304)
T 2f9y_B 185 AKMQERGLPYISVLTDPTMGGVSASFAMLGDLNIAEPKALIGFA-----------GPRVIEQTVREK------LPPGFQR 247 (304)
T ss_dssp HHHHHTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESS-----------CHHHHHHHHTSC------CCTTTTB
T ss_pred HHHhcCCCCEEEEEECCCccHHHHHHHhcCCEEEEeCCcEEEee-----------cHHHHHHHhCcc------CCcccCC
Confidence 3459999999999999999 778999999999999999987 345566667743 5789999
Q ss_pred HHHHHHCCCcceecCcchHHHHHHHHHHHHHccC
Q 004918 171 SEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (724)
Q Consensus 171 a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (724)
|+++.++|+||.|++++++.+.+.+++..++..+
T Consensus 248 Ae~~~~~Glvd~Vv~~~el~~~l~~ll~~l~~~~ 281 (304)
T 2f9y_B 248 SEFLIEKGAIDMIVRRPEMRLKLASILAKLMNLP 281 (304)
T ss_dssp HHHHGGGTCCSEECCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCCccEEeCcHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999999999999987653
No 123
>1y7o_A ATP-dependent CLP protease proteolytic subunit; hydrolase; 2.51A {Streptococcus pneumoniae} SCOP: c.14.1.1
Probab=99.47 E-value=1.7e-13 Score=136.23 Aligned_cols=140 Identities=16% Similarity=0.186 Sum_probs=108.9
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEEC
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVE 106 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~ 106 (724)
.++..+.+++.+.|..++++++++.|+|. ..|.|+++.. ...++ +.|..+++||++.++
T Consensus 53 ~I~~~~a~~i~~~L~~l~~~~~~k~I~l~----InSPGG~v~a----------------g~~I~-~~i~~~~~pV~t~v~ 111 (218)
T 1y7o_A 53 PVEDNMANSVIAQLLFLDAQDSTKDIYLY----VNTPGGSVSA----------------GLAIV-DTMNFIKADVQTIVM 111 (218)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCTTSCEEEE----EEECCBCHHH----------------HHHHH-HHHHHSSSCEEEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEE----EECcCCCHHH----------------HHHHH-HHHHhcCCCEEEEEc
Confidence 48899999999999999988777887775 2334444321 22344 668889999999999
Q ss_pred ccccchhHHHHhhcCE--EEEeCCceeeCcccccCccCCcchh------------------hhhcccccH--HHHHHHHH
Q 004918 107 GLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLVGL--SKAIEMML 164 (724)
Q Consensus 107 G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~G~~P~~g~~------------------~~l~r~~G~--~~a~~l~l 164 (724)
|.|.++|+.|+++||. |+|.++++|++++.. |.+|..|.. ..+++..|. .++.+++.
T Consensus 112 G~AaS~G~~Ia~a~d~g~r~a~p~a~igih~p~-~g~~~~G~~~di~~~~~~i~~~~~~~~~~~a~~~G~~~~~i~~~~~ 190 (218)
T 1y7o_A 112 GMAASMGTVIASSGAKGKRFMLPNAEYMIHQPM-GGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSMEKVHADAE 190 (218)
T ss_dssp EEEETHHHHHHTTSCTTCEEECTTCEEECCCCC---------------CHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred cEeHHHHHHHHHcCCcCcEEEcCCcEEEEeccc-ccccCcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHh
Confidence 9999999999999999 999999999999987 444433332 446666666 58889999
Q ss_pred cCCCCCHHHHHHCCCcceecCcch
Q 004918 165 LSKSITSEEGWKLGLIDAVVTSEE 188 (724)
Q Consensus 165 tg~~i~a~eA~~~Glv~~vv~~~~ 188 (724)
+|+.++|+||+++||||+|+++++
T Consensus 191 ~~~~~ta~EA~e~GLVD~v~~~~~ 214 (218)
T 1y7o_A 191 RDNWMSAQETLEYGFIDEIMANNS 214 (218)
T ss_dssp SCCCBCHHHHHHHTSCSEECCCC-
T ss_pred CCCEEcHHHHHHCCCCcEEcCcCC
Confidence 999999999999999999998765
No 124
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=99.46 E-value=1.4e-13 Score=144.66 Aligned_cols=186 Identities=17% Similarity=0.134 Sum_probs=128.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
+||+|||+|.||..+|..|++.|++|++||++++.++...+ .| +...++. +.+++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 60 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-----------QG-------------AQACENNQKVAAA 60 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-----------TT-------------CEECSSHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 58999999999999999999999999999999988765321 12 2223444 45678
Q ss_pred CCEEEEcccCChHHHHHHH--HHHHhhCCCCcEEEecCCCCC--HHHHhcccCC-CCCEEEEecCCCCC----CCCeeeE
Q 004918 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTID--LNIVGEKTSS-QDRIIGAHFFSPAH----VMPLLEI 458 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~-~~r~ig~h~~~p~~----~~~lvei 458 (724)
+|+||+|+|.+..++..+. .++.+.++++++|++.+++.+ ...+...+.. ..+++.. +..+.. .+.+..+
T Consensus 61 ~D~vi~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~a~~g~~~~~ 139 (301)
T 3cky_A 61 SDIIFTSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDA-PVSGGTKGAEAGTLTIM 139 (301)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEEC-CEESHHHHHHHTCEEEE
T ss_pred CCEEEEECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEc-cCCCCHHHHHcCCeEEE
Confidence 9999999986665554443 278888899999988777663 3455554432 2234331 211110 0122334
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCchh----hhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 459 VRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFA----VNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 459 i~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~pG~i----~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
+.+ +++.++.+.++++.+|..++++++ ..|.. .|.+ +...+.|++.+.+. |+++++++.++
T Consensus 140 ~~g---~~~~~~~v~~ll~~~g~~~~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 209 (301)
T 3cky_A 140 VGA---SEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEII 209 (301)
T ss_dssp EES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 443 689999999999999999888754 34433 4554 34567899888765 89999988887
No 125
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=99.46 E-value=6.1e-13 Score=136.74 Aligned_cols=185 Identities=11% Similarity=0.086 Sum_probs=129.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
++||+|||+|.||..++..|.+.|++|++||+++++++...+.. | +..+++. +.++
T Consensus 3 ~m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~----------g-------------~~~~~~~~~~~~ 59 (259)
T 2ahr_A 3 AMKIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL----------A-------------LPYAMSHQDLID 59 (259)
T ss_dssp CCEEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH----------T-------------CCBCSSHHHHHH
T ss_pred ccEEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc----------C-------------CEeeCCHHHHHh
Confidence 35899999999999999999999999999999998876643210 1 2223444 4567
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCC-eeeEecCCCCC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMP-LLEIVRTERTS 465 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~-lveii~~~~t~ 465 (724)
++|+||+|+| .....+++.++ .++++|++.+++++++.+........+++..|+..|..... ...++++..++
T Consensus 60 ~~D~Vi~~v~--~~~~~~v~~~l----~~~~~vv~~~~~~~~~~l~~~~~~~~~~v~~~p~~~~~~~~g~~~i~~~~~~~ 133 (259)
T 2ahr_A 60 QVDLVILGIK--PQLFETVLKPL----HFKQPIISMAAGISLQRLATFVGQDLPLLRIMPNMNAQILQSSTALTGNALVS 133 (259)
T ss_dssp TCSEEEECSC--GGGHHHHHTTS----CCCSCEEECCTTCCHHHHHHHHCTTSCEEEEECCGGGGGTCEEEEEEECTTCC
T ss_pred cCCEEEEEeC--cHhHHHHHHHh----ccCCEEEEeCCCCCHHHHHHhcCCCCCEEEEcCCchHHHcCceEEEEcCCCCC
Confidence 9999999999 44555565543 47778888888888888877776555788888877776655 35566777789
Q ss_pred HHHHHHHHHHHHHcCCeeEEEcCCC-ch------hhhhhhhHHHHHHH-HHHHcCCCHHHHHHHH
Q 004918 466 AQVILDLMTVGKIIKKVPVVVGNCT-GF------AVNRAFFPYSQSAR-LLVSLGVDVFRIDSAI 522 (724)
Q Consensus 466 ~e~~~~~~~l~~~lGk~~v~v~d~p-G~------i~nRl~~~~~~Ea~-~l~~~Gv~~~~ID~a~ 522 (724)
++.++.++++++.+| .++++++.. .. ..|.++..+..... .....|++++++-.++
T Consensus 134 ~~~~~~~~~ll~~~G-~~~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~~~~~Gl~~~~~~~~~ 197 (259)
T 2ahr_A 134 QELQARVRDLTDSFG-STFDISEKDFDTFTALAGSSPAYIYLFIEALAKAGVKNGIPKAKALEIV 197 (259)
T ss_dssp HHHHHHHHHHHHTTE-EEEECCGGGHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCC-CEEEecHHHccHHHHHhccHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 567776421 00 01222233332211 2445577777666655
No 126
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=99.45 E-value=3.3e-13 Score=141.78 Aligned_cols=184 Identities=18% Similarity=0.223 Sum_probs=126.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
+||+|||+|.||..+|..|++.|++|++||+++++++...+ .| +..+++. +.+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~ 61 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-----------AG-------------AETASTAKAIAEQ 61 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECSSHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-----------CC-------------CeecCCHHHHHhC
Confidence 48999999999999999999999999999999988765432 12 2233444 45678
Q ss_pred CCEEEEcccCChHHHHHHH--HHHHhhCCCCcEEEecCCCCCH--HHHhcccCCCCCEEEEecCCCCCC-------CCee
Q 004918 388 VDMVIEAVIESVPLKQKIF--SELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFSPAHV-------MPLL 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~--~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~~~r~ig~h~~~p~~~-------~~lv 456 (724)
+|+||+|+|.+..++..++ +++.+.++++++|++.+++.+. ..+...+... +.||+..|.. ...+
T Consensus 62 ~D~vi~~v~~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~pv~~~~~~~~~~~~ 137 (299)
T 1vpd_A 62 CDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK----GVEMLDAPVSGGEPKAIDGTL 137 (299)
T ss_dssp CSEEEECCSSHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT----TCEEEECCEESHHHHHHHTCE
T ss_pred CCEEEEECCCHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEecCCCCHhHHhcCCE
Confidence 9999999996555544443 5677888899988766555442 3455544321 2233222111 1113
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCchhh---hhhh----hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAV---NRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~pG~i~---nRl~----~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
.++.+. +++.++.+.++++.+|+.++++++ ..|... |+.+ ...++|++.+.+. |+++++++.++
T Consensus 138 ~~~~~~--~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 210 (299)
T 1vpd_A 138 SVMVGG--DKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAI 210 (299)
T ss_dssp EEEEES--CHHHHHHHHHHHHTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEeCC--CHHHHHHHHHHHHHHcCCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 444443 689999999999999999888854 444432 3333 3577899887765 89999998887
No 127
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.45 E-value=2.2e-14 Score=149.61 Aligned_cols=88 Identities=17% Similarity=0.199 Sum_probs=79.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhC-CCCCCC
Q 004918 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYG-NFFKPS 697 (724)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~-~~~~p~ 697 (724)
.+++++||++.++++||+.++++|++ ++++||.++..|+|+|+ |||+++|.+|+|++++++++ ..+ +++.|+
T Consensus 188 ~~g~i~nr~~~~~~~ea~~l~~~g~~-~~~~id~~~~~~~g~~~---Gp~~~~D~~Gld~~~~~~~~---~~~~~~~~~~ 260 (283)
T 4e12_A 188 KAGYVLNSLLVPLLDAAAELLVDGIA-DPETIDKTWRIGTGAPK---GPFEIFDIVGLTTAYNISSV---SGPKQREFAA 260 (283)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSC-CHHHHHHHHHHHHCCSS---CHHHHHHHHCHHHHHHHHHT---SCHHHHHHHH
T ss_pred CCCEEehHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhccCCCc---CHHHHHHhccHHHHHHHHhc---cccCcccCch
Confidence 46789999999999999999999999 99999999999999999 99999999999999999884 222 256788
Q ss_pred HHHHHHH-------HcCCCCCCC
Q 004918 698 RFLEERA-------TKGIPLSAP 713 (724)
Q Consensus 698 ~~l~~~~-------k~g~gfy~~ 713 (724)
+++++|+ |+|+|||+|
T Consensus 261 ~~~~~~v~~g~lG~k~g~Gfy~y 283 (283)
T 4e12_A 261 YLKENYIDKGKLGLATGEGFYRY 283 (283)
T ss_dssp HHHHHTGGGTCCBGGGTBSSSBC
T ss_pred HHHHHHHHCCCCceeCCeEeecC
Confidence 8999998 899999998
No 128
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=99.45 E-value=1.6e-12 Score=135.10 Aligned_cols=162 Identities=17% Similarity=0.167 Sum_probs=118.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCCC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 389 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aD 389 (724)
||+|||+|.||.++|..|.+.|++|++||++++.++.+.+ .|.. ...+++++.+++||
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g~~-----------~~~~~~~~~~~~~D 59 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVE-----------RQLV-----------DEAGQDLSLLQTAK 59 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTSC-----------SEEESCGGGGTTCS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh-----------CCCC-----------ccccCCHHHhCCCC
Confidence 7999999999999999999999999999999988765421 1211 01234553338999
Q ss_pred EEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCC------------CCCeee
Q 004918 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAH------------VMPLLE 457 (724)
Q Consensus 390 lVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~------------~~~lve 457 (724)
+||+|+| .+...+++.++.+.++++++|++. ++.....+........++++.||..... .++.+.
T Consensus 60 ~vi~av~--~~~~~~~~~~l~~~~~~~~~vv~~-~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~ 136 (279)
T 2f1k_A 60 IIFLCTP--IQLILPTLEKLIPHLSPTAIVTDV-ASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYV 136 (279)
T ss_dssp EEEECSC--HHHHHHHHHHHGGGSCTTCEEEEC-CSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEE
T ss_pred EEEEECC--HHHHHHHHHHHHhhCCCCCEEEEC-CCCcHHHHHHHHHHhCCEeecCcccCCccCCHHHHhHHHhCCCcEE
Confidence 9999999 677888999999999999988764 5555443332222223899999875221 233667
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCchhhhh
Q 004918 458 IVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTGFAVNR 496 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~pG~i~nR 496 (724)
++++..++++..+.++++++.+|..++++.+ ....+...
T Consensus 137 ~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~~~~~~~~~~ 176 (279)
T 2f1k_A 137 LTPTEYTDPEQLACLRSVLEPLGVKIYLCTPADHDQAVAW 176 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHGGGTCEEEECCHHHHHHHHHH
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCEEEEcCHHHHHHHHHH
Confidence 7777778999999999999999999888864 33444433
No 129
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.45 E-value=1.2e-12 Score=136.30 Aligned_cols=155 Identities=15% Similarity=0.160 Sum_probs=116.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
|+||+|||+|.||.++|..|++.|+ +|++||++++.++.+. +.|.. ...+++. +.
T Consensus 1 m~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~-----------~~g~~-----------~~~~~~~~~~ 58 (281)
T 2g5c_A 1 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-----------DLGII-----------DEGTTSIAKV 58 (281)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-----------HTTSC-----------SEEESCGGGG
T ss_pred CcEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH-----------HCCCc-----------ccccCCHHHH
Confidence 4689999999999999999999999 9999999998876532 12211 0123445 56
Q ss_pred cC-CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccCCCCCEEEEecCCCCC----------
Q 004918 385 FK-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH---------- 451 (724)
Q Consensus 385 ~~-~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~---------- 451 (724)
++ +||+||+||| .....+++.++.+.++++++|++.+++.. ...+...+.. ++++.||+..+.
T Consensus 59 ~~~~aDvVilavp--~~~~~~v~~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~--~~v~~~p~~~~~~~gp~~a~~~ 134 (281)
T 2g5c_A 59 EDFSPDFVMLSSP--VRTFREIAKKLSYILSEDATVTDQGSVKGKLVYDLENILGK--RFVGGHPIAGTEKSGVEYSLDN 134 (281)
T ss_dssp GGTCCSEEEECSC--HHHHHHHHHHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG--GEECEEEECCCSCCSGGGCCSS
T ss_pred hcCCCCEEEEcCC--HHHHHHHHHHHHhhCCCCcEEEECCCCcHHHHHHHHHhccc--cceeeccccCCccCChhhhhhH
Confidence 78 9999999999 56667888899888999988775444333 2334444432 488888865321
Q ss_pred --CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 452 --VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 452 --~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
.+..+.++++..++++.++.++++++.+|..++++++
T Consensus 135 l~~g~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~~~~~ 173 (281)
T 2g5c_A 135 LYEGKKVILTPTKKTDKKRLKLVKRVWEDVGGVVEYMSP 173 (281)
T ss_dssp TTTTCEEEECCCSSSCHHHHHHHHHHHHHTTCEEEECCH
T ss_pred HhCCCCEEEecCCCCCHHHHHHHHHHHHHcCCEEEEcCH
Confidence 3455777888788999999999999999999888764
No 130
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=99.45 E-value=1.8e-12 Score=136.90 Aligned_cols=168 Identities=14% Similarity=0.173 Sum_probs=113.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc---cC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY---SE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~---~~ 384 (724)
|+||+|||+|.||+.+|..|+++|++|++||++++.++...+. .+. ....+ .....++..+++. ++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~---g~~-~~~~~-------~~~~~~~~~~~~~~~~~~ 71 (316)
T 2ew2_A 3 AMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN---GLI-ADFNG-------EEVVANLPIFSPEEIDHQ 71 (316)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH---CEE-EEETT-------EEEEECCCEECGGGCCTT
T ss_pred CCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC---CEE-EEeCC-------CeeEecceeecchhhccc
Confidence 4689999999999999999999999999999999887764321 000 00000 0001123323322 23
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH-HHHhcccCCCCCEE-EEecCCCCCCCC--------
Q 004918 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRII-GAHFFSPAHVMP-------- 454 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~i-g~h~~~p~~~~~-------- 454 (724)
++++|+||.|+| .....++++++.+.++++++|++.++++.. ..+.+.+. +.+++ |.+++..+..+|
T Consensus 72 ~~~~d~vi~~v~--~~~~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~~~~~-~~~vi~g~~~~~~~~~~p~~~~~~~~ 148 (316)
T 2ew2_A 72 NEQVDLIIALTK--AQQLDAMFKAIQPMITEKTYVLCLLNGLGHEDVLEKYVP-KENILVGITMWTAGLEGPGRVKLLGD 148 (316)
T ss_dssp SCCCSEEEECSC--HHHHHHHHHHHGGGCCTTCEEEECCSSSCTHHHHTTTSC-GGGEEEEEECCCCEEEETTEEEECSC
T ss_pred CCCCCEEEEEec--cccHHHHHHHHHHhcCCCCEEEEecCCCCcHHHHHHHcC-CccEEEEEeeeeeEEcCCCEEEEecC
Confidence 459999999999 556788999999999999999988888776 44555554 33677 444433222221
Q ss_pred -eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004918 455 -LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (724)
Q Consensus 455 -lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 489 (724)
.+.+.....++++..+.+.++++.+|..+++.++.
T Consensus 149 g~~~i~~~~~~~~~~~~~~~~ll~~~g~~~~~~~d~ 184 (316)
T 2ew2_A 149 GEIELENIDPSGKKFALEVVDVFQKAGLNPSYSSNV 184 (316)
T ss_dssp CCEEEEESSGGGHHHHHHHHHHHHHTTCCEEECTTH
T ss_pred CcEEEeecCCCccHHHHHHHHHHHhCCCCcEEchhH
Confidence 12344444567899999999999999987777664
No 131
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=99.42 E-value=3e-13 Score=150.36 Aligned_cols=108 Identities=15% Similarity=0.206 Sum_probs=98.0
Q ss_pred CCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHH
Q 004918 463 RTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLD 536 (724)
Q Consensus 463 ~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~~~~Ea~~l~~~Gv--~~~~ID~a~-~~~g~~~---Gp~~~~D 536 (724)
.+++++.+.+..+.+.+|+.++.+ .+|+|+||++.+++|||++++++|+ +++|||.++ .|+|||+ |||+++|
T Consensus 331 ~~~~~~~~~~~~~~~~~g~~~~~~--~~g~i~~Rll~~~~nEa~~~l~eGIa~~~~dID~a~~~G~G~p~~~gGP~~~~D 408 (463)
T 1zcj_A 331 KPDPWLSTFLSQYREVHHIEQRTI--SKEEILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAA 408 (463)
T ss_dssp EECHHHHHHHHHHHHHTTCCCCCC--CHHHHHHHHHHHHHHHHHHHHHTTSBSCHHHHHHHHHHHSCCCGGGCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCcccC--CHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhCCCCCCCCcChHHHHH
Confidence 468999999998888888766543 3799999999999999999999998 599999999 9999998 9999999
Q ss_pred hhchHHHHHHHHHHHHhCCC--CCCCcHHHHHHHHcCC
Q 004918 537 LAGYGVAAATSKEFDKAFPD--RSFQSPLVDLLLKSGR 572 (724)
Q Consensus 537 ~~Gld~~~~~~~~l~~~~~~--~~~~~~~l~~~v~~g~ 572 (724)
.+|+|.+.++++.+++.+++ ++.|+++|++|+++|+
T Consensus 409 ~~Gl~~~~~~~~~l~~~~g~~~~~~p~~lL~~~v~~G~ 446 (463)
T 1zcj_A 409 SVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGS 446 (463)
T ss_dssp HHCHHHHHHHHHHHHHHCTTCGGGSCCHHHHHHHHTTC
T ss_pred HhCHHHHHHHHHHHHHHhCCCccCCCCHHHHHHHHcCC
Confidence 99999999999999999998 4459999999999886
No 132
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=99.42 E-value=1.2e-13 Score=144.79 Aligned_cols=181 Identities=19% Similarity=0.150 Sum_probs=124.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCCC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (724)
||+|||+|.||..+|..|+++|++|++||+++++++...+ .| +..+++. +.++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~~~ 57 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQD-----------AG-------------EQVVSSPADVAEKA 57 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHT-----------TT-------------CEECSSHHHHHHHC
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cC-------------CeecCCHHHHHhcC
Confidence 7999999999999999999999999999999988765421 11 2334444 457889
Q ss_pred CEEEEcccCChHHHHHHHHH---HHhhCCCCcEEEecCCCCCHHHHhc---ccCCCCCEEEEecCCCCCCC-------Ce
Q 004918 389 DMVIEAVIESVPLKQKIFSE---LEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHVM-------PL 455 (724)
Q Consensus 389 DlVIeav~e~~~~k~~v~~~---l~~~~~~~~ii~s~ts~~~~~~~~~---~~~~~~r~ig~h~~~p~~~~-------~l 455 (724)
|+||+|+|.+..++ .++.+ +.+.++++++|++ ++++.+..... ..... +.+|.+.|... ..
T Consensus 58 Dvvi~~vp~~~~~~-~v~~~~~~~~~~l~~~~~vv~-~s~~~~~~~~~~~~~~~~~----g~~~~~~p~~~g~~~a~~~~ 131 (296)
T 2gf2_A 58 DRIITMLPTSINAI-EAYSGANGILKKVKKGSLLID-SSTIDPAVSKELAKEVEKM----GAVFMDAPVSGGVGAARSGN 131 (296)
T ss_dssp SEEEECCSSHHHHH-HHHHSTTSGGGTCCTTCEEEE-CSCCCHHHHHHHHHHHHHT----TCEEEECCEESHHHHHHHTC
T ss_pred CEEEEeCCCHHHHH-HHHhCchhHHhcCCCCCEEEE-CCCCCHHHHHHHHHHHHHc----CCEEEEcCCCCChhHHhcCc
Confidence 99999998555544 45554 3446678888888 88888765442 22211 22333322111 11
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-Cch---hhhhhhh----HHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TGF---AVNRAFF----PYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 456 veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-pG~---i~nRl~~----~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
..++.+ .+++.++.++++++.+|+.++.+++. .|. ++|+.+. .+++|++.+.+. |+++++++.++
T Consensus 132 ~~~~~~--~~~~~~~~v~~l~~~~g~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~ 205 (296)
T 2gf2_A 132 LTFMVG--GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKIL 205 (296)
T ss_dssp EEEEEE--SCGGGHHHHHHHHTTTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred EEEEeC--CCHHHHHHHHHHHHHHcCCeEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 334444 36888999999999999998887652 222 2344432 577899988765 89999999988
No 133
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=99.42 E-value=5.2e-13 Score=148.90 Aligned_cols=202 Identities=16% Similarity=0.174 Sum_probs=137.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCC--CHHHHHHhh-----cCccc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL--TQDKANNAL-----KMLKG 378 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~--~~~~~~~~~-----~~i~~ 378 (724)
|+||+|||+|.||.++|..|+++ |++|++||+++++++...+ +.. ........+ .++.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~------------g~~~i~e~~l~~~~~~~~~~~~~~ 72 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNS------------PTLPIYEPGLKEVVESCRGKNLFF 72 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTEEE
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhC------------CCCCcCCCCHHHHHHHhhcCCEEE
Confidence 56999999999999999999998 8999999999998776421 110 000000111 24666
Q ss_pred ccCc-cCcCCCCEEEEcccCChHH-------------HHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccCCC-CC
Q 004918 379 VLDY-SEFKDVDMVIEAVIESVPL-------------KQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQ-DR 440 (724)
Q Consensus 379 ~~~~-~~~~~aDlVIeav~e~~~~-------------k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~-~r 440 (724)
++++ +++++||+||+|||.+... ..++.+++.+.++++++|+. +|+.++. .+...+... ..
T Consensus 73 t~~~~e~~~~aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~g~~~~l~~~l~~~~~~ 151 (467)
T 2q3e_A 73 STNIDDAIKEADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTE-KSTVPVRAAESIRRIFDANTKP 151 (467)
T ss_dssp ESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEE-CSCCCTTHHHHHHHHHHHTCCT
T ss_pred ECCHHHHHhcCCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEE-CCcCCchHHHHHHHHHHHhCCC
Confidence 7776 5678999999999865532 45777888888899988754 4444432 233332211 11
Q ss_pred EEEEe-cCCCCCCCCeee---------E-ecCCC--CCHHHHHHHHHHHHHc-CCeeEEEcC-----CCchhhhhh---h
Q 004918 441 IIGAH-FFSPAHVMPLLE---------I-VRTER--TSAQVILDLMTVGKII-KKVPVVVGN-----CTGFAVNRA---F 498 (724)
Q Consensus 441 ~ig~h-~~~p~~~~~lve---------i-i~~~~--t~~e~~~~~~~l~~~l-Gk~~v~v~d-----~pG~i~nRl---~ 498 (724)
.+..+ .++|....+... + +.++. +++++.+.++++++.+ |+.++++++ ...++.|.+ .
T Consensus 152 ~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ 231 (467)
T 2q3e_A 152 NLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQALCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQR 231 (467)
T ss_dssp TCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHHHHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHHHHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHH
Confidence 11111 245555544432 3 34433 3788999999999998 777888764 345777875 3
Q ss_pred hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 499 FPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 499 ~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
.++++|+..+.+. |++++++..++
T Consensus 232 ia~~nE~~~l~~~~Gid~~~v~~~~ 256 (467)
T 2q3e_A 232 ISSINSISALCEATGADVEEVATAI 256 (467)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 5788999999877 89999999998
No 134
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=99.42 E-value=1.4e-12 Score=143.40 Aligned_cols=203 Identities=16% Similarity=0.126 Sum_probs=133.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHH--hhcCcccccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANN--ALKMLKGVLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~--~~~~i~~~~~~-~~~ 385 (724)
-+|+|||+|.||.++|.+|+++||+|++||+++++++...+... ...+.| + .+-... ..+++.+++++ +++
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~----~~~epg-l-~~~~~~~~~~g~l~~ttd~~ea~ 82 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVM----PIYEPG-L-DALVASNVKAGRLSFTTDLAEGV 82 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCC----SSCCTT-H-HHHHHHHHHTTCEEEESCHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCC----CccCCC-H-HHHHHhhcccCCEEEECCHHHHH
Confidence 47999999999999999999999999999999998887543100 000000 0 000000 12568888888 678
Q ss_pred CCCCEEEEcccCChH---------HHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccC----CCCCEEEEecCCC
Q 004918 386 KDVDMVIEAVIESVP---------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTS----SQDRIIGAHFFSP 449 (724)
Q Consensus 386 ~~aDlVIeav~e~~~---------~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~----~~~r~ig~h~~~p 449 (724)
++||+||.|||...+ ..+++++.+.+.++++++|++. |++++. .+...+. ...-.+. ++|
T Consensus 83 ~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~-STv~pgtt~~l~~~l~e~~~~~d~~v~---~~P 158 (446)
T 4a7p_A 83 KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTK-STVPVGTGDEVERIIAEVAPNSGAKVV---SNP 158 (446)
T ss_dssp TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEEC-SCCCTTHHHHHHHHHHHHSTTSCCEEE---ECC
T ss_pred hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEe-CCCCchHHHHHHHHHHHhCCCCCceEE---eCc
Confidence 999999999987653 5788889999999999988764 455543 2222211 1111122 133
Q ss_pred CCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCe---eEEEcCCC-----chhhhhh---hhHHHHHHHHHH
Q 004918 450 AHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKV---PVVVGNCT-----GFAVNRA---FFPYSQSARLLV 509 (724)
Q Consensus 450 ~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk~---~v~v~d~p-----G~i~nRl---~~~~~~Ea~~l~ 509 (724)
....+.- -++.|. .++++.+.+++++..+++. ++++++.. .++.|-+ ..+++||+..+.
T Consensus 159 e~a~eG~a~~d~~~p~~ivvG~-~~~~~~~~~~~ly~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~ 237 (446)
T 4a7p_A 159 EFLREGAAIEDFKRPDRVVVGT-EDEFARQVMREIYRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLC 237 (446)
T ss_dssp CCCCTTSHHHHHHSCSCEEEEC-SCHHHHHHHHHHHCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccchhhhccCCCEEEEeC-CcHHHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3222221 233332 3689999999999999875 57766532 2333433 347789999888
Q ss_pred Hc-CCCHHHHHHHH
Q 004918 510 SL-GVDVFRIDSAI 522 (724)
Q Consensus 510 ~~-Gv~~~~ID~a~ 522 (724)
+. |++++++-.++
T Consensus 238 ~~~GiD~~~v~~~~ 251 (446)
T 4a7p_A 238 EQVGADVQEVSRGI 251 (446)
T ss_dssp HHTTCCHHHHHHHH
T ss_pred HHcCCCHHHHHHHH
Confidence 76 99999988888
No 135
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=99.41 E-value=2.8e-12 Score=141.72 Aligned_cols=203 Identities=15% Similarity=0.102 Sum_probs=135.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHH-HHH--hhcCcccccCcc-C
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK-ANN--ALKMLKGVLDYS-E 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~-~~~--~~~~i~~~~~~~-~ 384 (724)
+||+|||+|.||.++|..|+++|++|++||+++++++...+.... ....+ -.+ ... ..+++.++++++ +
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~----i~e~g---l~~~l~~~~~~~~l~~t~d~~ea 75 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIP----IYEPG---LEKMIARNVKAGRLRFGTEIEQA 75 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSC----CCSTT---HHHHHHHHHHTTSEEEESCHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCc----ccCCC---HHHHHHhhcccCcEEEECCHHHH
Confidence 589999999999999999999999999999999988775431000 00000 000 000 124677788884 5
Q ss_pred cCCCCEEEEcccCChH--------HHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccCC----C---CCEEEEec
Q 004918 385 FKDVDMVIEAVIESVP--------LKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS----Q---DRIIGAHF 446 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~--------~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~----~---~r~ig~h~ 446 (724)
+++||+||.|||.+.+ ...++++++.++++++++|++.+ ++++. .+...+.. . ..+.-.
T Consensus 76 ~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~S-Tv~pgt~~~l~~~l~~~~~~~~~~~d~~v~-- 152 (450)
T 3gg2_A 76 VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKS-TVPVGSYRLIRKAIQEELDKREVLIDFDIA-- 152 (450)
T ss_dssp GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECS-CCCTTHHHHHHHHHHHHHHHTTCCCCEEEE--
T ss_pred HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEee-eCCCcchHHHHHHHHHhccccCcCcceeEE--
Confidence 8999999999986642 77888899999999999887544 44432 22222210 0 112111
Q ss_pred CCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCC--eeEEEcCCC-----chhhhhh---hhHHHHHHHH
Q 004918 447 FSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKK--VPVVVGNCT-----GFAVNRA---FFPYSQSARL 507 (724)
Q Consensus 447 ~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk--~~v~v~d~p-----G~i~nRl---~~~~~~Ea~~ 507 (724)
++|....+.. -++-|. .++++.+.++++++.+++ .++++.+.. .++.|-+ ..+++||+..
T Consensus 153 ~~Pe~a~eG~~~~~~~~p~~ivvG~-~~~~~~~~~~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~ 231 (450)
T 3gg2_A 153 SNPEFLKEGNAIDDFMKPDRVVVGV-DSDRARELITSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVAN 231 (450)
T ss_dssp ECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred echhhhcccchhhhccCCCEEEEEc-CCHHHHHHHHHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2444333321 133332 368999999999999987 366665532 2444543 3577899998
Q ss_pred HHHc-CCCHHHHHHHH
Q 004918 508 LVSL-GVDVFRIDSAI 522 (724)
Q Consensus 508 l~~~-Gv~~~~ID~a~ 522 (724)
+.+. |++++++-.++
T Consensus 232 l~~~~Gid~~~v~~~~ 247 (450)
T 3gg2_A 232 LCERVGADVSMVRLGI 247 (450)
T ss_dssp HHHHHTCCHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHH
Confidence 8877 99999999888
No 136
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=99.41 E-value=9e-13 Score=143.87 Aligned_cols=200 Identities=14% Similarity=0.110 Sum_probs=131.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHH-HHH--hhcCcccccCccC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDK-ANN--ALKMLKGVLDYSE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~-~~~--~~~~i~~~~~~~~ 384 (724)
-.|..|||+|.||.++|.+|+++||+|++||+++++++...+.... ..+.| -++ ... ..+++.++++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~p----i~epg---l~~ll~~~~~~g~l~~ttd--- 80 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQIS----IEEPG---LQEVYEEVLSSGKLKVSTT--- 80 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCS----SCCTT---HHHHHHHHHHTTCEEEESS---
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCC----cCCCC---HHHHHHhhcccCceEEeCc---
Confidence 4689999999999999999999999999999999998876431000 00000 000 000 1246777776
Q ss_pred cCCCCEEEEcccCChH----------HHHHHHHHHHhhCCCCcEEEecCCCCCHHH---Hhccc-C-CC----CCEEEEe
Q 004918 385 FKDVDMVIEAVIESVP----------LKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKT-S-SQ----DRIIGAH 445 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~----------~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~---~~~~~-~-~~----~r~ig~h 445 (724)
+++||+||.|||.+.. ......+.+.+.++++++|+. .||.++.. +...+ . .. ..|.-+
T Consensus 81 ~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~-~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~- 158 (431)
T 3ojo_A 81 PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIV-ESTIAPKTMDDFVKPVIENLGFTIGEDIYLV- 158 (431)
T ss_dssp CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEE-CSCCCTTHHHHTHHHHHHTTTCCBTTTEEEE-
T ss_pred hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEE-ecCCChhHHHHHHHHHHHHcCCCcCCCeEEE-
Confidence 4589999999997652 356667889999999998764 45555432 22211 1 11 112111
Q ss_pred cCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC-Cc---hhhhhhh----hHHHHHHHHH
Q 004918 446 FFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC-TG---FAVNRAF----FPYSQSARLL 508 (724)
Q Consensus 446 ~~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-pG---~i~nRl~----~~~~~Ea~~l 508 (724)
++|....+.- -++.|. ++++.+.++++++.+++.++++++. .+ .++|.++ .+++||+..+
T Consensus 159 -~~Pe~~~~G~A~~~~~~p~~Iv~G~--~~~~~~~~~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l 235 (431)
T 3ojo_A 159 -HCPERVLPGKILEELVHNNRIIGGV--TKACIEAGKRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKI 235 (431)
T ss_dssp -ECCCCCCTTSHHHHHHHSCEEEEES--SHHHHHHHHHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ECCCcCCCcchhhcccCCCEEEEeC--CHHHHHHHHHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2443332221 355553 6899999999999999888777542 12 2334332 4778999988
Q ss_pred HHc-CCCHHHHHHHH
Q 004918 509 VSL-GVDVFRIDSAI 522 (724)
Q Consensus 509 ~~~-Gv~~~~ID~a~ 522 (724)
.+. |+++.++-+++
T Consensus 236 ~e~~GiD~~~v~~~~ 250 (431)
T 3ojo_A 236 CNNLNINVLDVIEMA 250 (431)
T ss_dssp HHHTTCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 876 99999988888
No 137
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=99.41 E-value=2.3e-13 Score=142.70 Aligned_cols=182 Identities=17% Similarity=0.148 Sum_probs=125.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
++||+|||+|.||..+|..|++.|++|++|| ++++++...+ .| +...++. +.++
T Consensus 3 ~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~-----------~g-------------~~~~~~~~~~~~ 57 (295)
T 1yb4_A 3 AMKLGFIGLGIMGSPMAINLARAGHQLHVTT-IGPVADELLS-----------LG-------------AVNVETARQVTE 57 (295)
T ss_dssp -CEEEECCCSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT-----------TT-------------CBCCSSHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH-----------cC-------------CcccCCHHHHHh
Confidence 3589999999999999999999999999999 8877655321 12 2223444 4578
Q ss_pred CCCEEEEcccCChHHHHHHHH---HHHhhCCCCcEEEecCCCCC--HHHHhcccCCCCCEEEEecCCCCCC--------C
Q 004918 387 DVDMVIEAVIESVPLKQKIFS---ELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAHV--------M 453 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~---~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~~--------~ 453 (724)
++|+||+|+|.+..++ .++. ++.+.++++++|++.+++.+ ...+...+... +.||++.|.. +
T Consensus 58 ~~D~vi~~vp~~~~~~-~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~----g~~~~~~p~~~~~~~a~~g 132 (295)
T 1yb4_A 58 FADIIFIMVPDTPQVE-DVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM----GADYLDAPVSGGEIGAREG 132 (295)
T ss_dssp TCSEEEECCSSHHHHH-HHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT----TEEEEECCEESHHHHHHHT
T ss_pred cCCEEEEECCCHHHHH-HHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc----CCeEEEccCCCCHHHHHcC
Confidence 9999999999655544 4444 67777888998886655533 23455544331 3455433321 2
Q ss_pred CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-CCc----hhhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 454 PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-CTG----FAVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 454 ~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-~pG----~i~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
.+..++.+ +++.++.+.++++.+|..++++++ ..+ ++.|.+ +...++|++.+.+. |++++++..++
T Consensus 133 ~~~~~~~~---~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~ 207 (295)
T 1yb4_A 133 TLSIMVGG---EQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQAL 207 (295)
T ss_dssp CEEEEEES---CHHHHHHHHHHHHHHEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CeEEEECC---CHHHHHHHHHHHHHhcCCEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 33444444 689999999999999999888865 333 234443 23577899888866 89999998888
No 138
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=99.41 E-value=9.1e-13 Score=135.61 Aligned_cols=147 Identities=12% Similarity=0.070 Sum_probs=110.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC----CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN----IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G----~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (724)
++||+|||+|.||+++|..|+++| ++|++||+++++ .| +..+++.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~-----------------~g-------------~~~~~~~~ 53 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKKN-----------------TT-------------LNYMSSNE 53 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCCS-----------------SS-------------SEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCccc-----------------Cc-------------eEEeCCHH
Confidence 358999999999999999999999 799999999764 01 2223344
Q ss_pred cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCCCCCCeee-EecC
Q 004918 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPAHVMPLLE-IVRT 461 (724)
Q Consensus 383 ~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~~~~~lve-ii~~ 461 (724)
+.+++||+||+|+| .....+++.++.+.+ ++++|++.+++++...+...+....+++...+..|......+. ++++
T Consensus 54 ~~~~~~D~vi~~v~--~~~~~~v~~~l~~~l-~~~~vv~~~~gi~~~~l~~~~~~~~~~v~~~p~~p~~~~~g~~~~~~~ 130 (262)
T 2rcy_A 54 ELARHCDIIVCAVK--PDIAGSVLNNIKPYL-SSKLLISICGGLNIGKLEEMVGSENKIVWVMPNTPCLVGEGSFIYCSN 130 (262)
T ss_dssp HHHHHCSEEEECSC--TTTHHHHHHHSGGGC-TTCEEEECCSSCCHHHHHHHHCTTSEEEEEECCGGGGGTCEEEEEEEC
T ss_pred HHHhcCCEEEEEeC--HHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHhCCCCcEEEECCChHHHHcCCeEEEEeC
Confidence 55678999999999 456778888888888 5677788899999887777665433444333334444434344 4567
Q ss_pred CCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 462 ERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 462 ~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
+.++++.++.++++++.+|+ ++++++
T Consensus 131 ~~~~~~~~~~~~~ll~~~G~-~~~~~~ 156 (262)
T 2rcy_A 131 KNVNSTDKKYVNDIFNSCGI-IHEIKE 156 (262)
T ss_dssp TTCCHHHHHHHHHHHHTSEE-EEECCG
T ss_pred CCCCHHHHHHHHHHHHhCCC-EEEeCH
Confidence 77899999999999999997 777764
No 139
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=99.41 E-value=1.1e-12 Score=140.72 Aligned_cols=169 Identities=13% Similarity=0.066 Sum_probs=116.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
+.++||+|||+|.||+++|..|+++|++|++||++++.++...+...+ ..+...-. ...++.+++++ ++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~--~~~l~g~~--------l~~~i~~t~d~~ea 96 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVN--NRYLPNYP--------FPETLKAYCDLKAS 96 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSB--TTTBTTCC--------CCTTEEEESCHHHH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCC--cccCCCCc--------cCCCeEEECCHHHH
Confidence 345689999999999999999999999999999999987765432100 00011000 12356677777 57
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH------HHhcccCCCCCEEEEecCCCCC------C
Q 004918 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN------IVGEKTSSQDRIIGAHFFSPAH------V 452 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~------~~~~~~~~~~r~ig~h~~~p~~------~ 452 (724)
+++||+||+||| .+..+++++++.++++++++|++.++++... .+.+.+.. ..+..+ ..|.+ .
T Consensus 97 ~~~aDvVilaVp--~~~~~~vl~~i~~~l~~~~ivvs~~kGi~~~t~~~se~i~~~l~~-~~~~vl--sgP~~a~ev~~g 171 (356)
T 3k96_A 97 LEGVTDILIVVP--SFAFHEVITRMKPLIDAKTRIAWGTKGLAKGSRLLHEVVATELGQ-VPMAVI--SGPSLATEVAAN 171 (356)
T ss_dssp HTTCCEEEECCC--HHHHHHHHHHHGGGCCTTCEEEECCCSCBTTTBCHHHHHHHHHCS-CCEEEE--ESSCCHHHHHTT
T ss_pred HhcCCEEEECCC--HHHHHHHHHHHHHhcCCCCEEEEEeCCCCcCccCHHHHHHHHcCC-CCEEEE--ECccHHHHHHcC
Confidence 899999999999 7788999999999999999999888877654 23333331 122111 12221 1
Q ss_pred CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc
Q 004918 453 MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (724)
Q Consensus 453 ~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG 491 (724)
.+...++.+ .+++..+.+++++...+..+++..|..|
T Consensus 172 ~pt~~via~--~~~~~~~~v~~lf~~~~~rv~~~~Di~g 208 (356)
T 3k96_A 172 LPTAVSLAS--NNSQFSKDLIERLHGQRFRVYKNDDMIG 208 (356)
T ss_dssp CCEEEEEEE--SCHHHHHHHHHHHCCSSEEEEEESCHHH
T ss_pred CCeEEEEec--CCHHHHHHHHHHhCCCCeeEEEeCCHHH
Confidence 112122222 3788999999999999988888777554
No 140
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=99.40 E-value=3.1e-13 Score=135.44 Aligned_cols=154 Identities=18% Similarity=0.236 Sum_probs=112.3
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCCcEEE-EeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
++|+||+|||+|.||.++|..|+++|++|++ |||+++++++..+.. | .....++.+.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~----------g------------~~~~~~~~~~ 78 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF----------G------------ASVKAVELKD 78 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH----------T------------TTEEECCHHH
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh----------C------------CCcccChHHH
Confidence 4567999999999999999999999999999 999999877643211 1 0112334466
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC--------------CHHHHhcccCCCCCEEEEecCCCC
Q 004918 385 FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--------------DLNIVGEKTSSQDRIIGAHFFSPA 450 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--------------~~~~~~~~~~~~~r~ig~h~~~p~ 450 (724)
++++|+||+|+| .+...+++.++.+ + ++++|++.++++ ....+++.++ ..+++..+++.|.
T Consensus 79 ~~~aDvVilavp--~~~~~~v~~~l~~-~-~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~ 153 (220)
T 4huj_A 79 ALQADVVILAVP--YDSIADIVTQVSD-W-GGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP-GAKVVKAFNTLPA 153 (220)
T ss_dssp HTTSSEEEEESC--GGGHHHHHTTCSC-C-TTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST-TCEEEEESCSSCH
T ss_pred HhcCCEEEEeCC--hHHHHHHHHHhhc-c-CCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC-CCCEEECCCCCCH
Confidence 889999999998 7778888888766 4 577888887776 3455666554 4566666554333
Q ss_pred CCC---------CeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 451 HVM---------PLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 451 ~~~---------~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
... +...++.+ .++++.+.++++++.+|+.++.+++
T Consensus 154 ~v~~~g~~~~~~~~~v~~~g--~~~~~~~~v~~l~~~~G~~~~~~G~ 198 (220)
T 4huj_A 154 AVLAADPDKGTGSRVLFLSG--NHSDANRQVAELISSLGFAPVDLGT 198 (220)
T ss_dssp HHHTSCSBCSSCEEEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred HHhhhCcccCCCCeeEEEeC--CCHHHHHHHHHHHHHhCCCeEeeCC
Confidence 221 12233344 3699999999999999999999876
No 141
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=99.39 E-value=2.8e-12 Score=139.75 Aligned_cols=195 Identities=16% Similarity=0.195 Sum_probs=131.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHh----hcCcccccCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY 382 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~----~~~i~~~~~~ 382 (724)
.++||+|||+|.||.++|..|++ |++|++||+++++++...+.. ..+.....+.. ..++.+++++
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~----------~~i~e~~l~~ll~~~~~~l~~ttd~ 103 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI----------SPIVDKEIQEYLAEKPLNFRATTDK 103 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC----------CccccccHHHHHhhccCCeEEEcCH
Confidence 45699999999999999999998 999999999999988754311 01111111111 2367888887
Q ss_pred -cCcCCCCEEEEcccCCh---------HHHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccCCCCCEEEEecCCC
Q 004918 383 -SEFKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSP 449 (724)
Q Consensus 383 -~~~~~aDlVIeav~e~~---------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~~r~ig~h~~~p 449 (724)
+++++||+||+|||++. ....++.+.+.+ ++++++|+. .|+.++. ++...+.. . ++.| +|
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~-~STv~pgtt~~l~~~l~~--~--~v~~-sP 176 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMII-KSTIPVGFTRDIKERLGI--D--NVIF-SP 176 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEE-CSCCCTTHHHHHHHHHTC--C--CEEE-CC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEE-eCCCChHHHHHHHHHHhh--c--cEee-cC
Confidence 67899999999999864 356777788888 888888864 5555543 34443322 2 2222 66
Q ss_pred CCCCCee---------eEecCCCCCHHHHHHHHHHHHH--cCC-eeEEEcCCCc------hhhhhh---hhHHHHHHHHH
Q 004918 450 AHVMPLL---------EIVRTERTSAQVILDLMTVGKI--IKK-VPVVVGNCTG------FAVNRA---FFPYSQSARLL 508 (724)
Q Consensus 450 ~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~--lGk-~~v~v~d~pG------~i~nRl---~~~~~~Ea~~l 508 (724)
....+.- .++.|. +++..+.+.+++.. +++ .++++.+ ++ ++.|-+ ..+++||+..+
T Consensus 177 e~~~~G~A~~~~l~p~rIvvG~--~~~~~~~~~~ll~~~~~~~~~~v~~~~-~~~AE~~Kl~~N~~~a~~Ia~~nEl~~l 253 (432)
T 3pid_A 177 EFLREGRALYDNLHPSRIVIGE--RSARAERFADLLKEGAIKQDIPTLFTD-STEAEAIKLFANTYLALRVAYFNELDSY 253 (432)
T ss_dssp CCCCTTSHHHHHHSCSCEEESS--CSHHHHHHHHHHHHHCSSSSCCEEECC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCcchhhhcccCCceEEecC--CHHHHHHHHHHHHhhhccCCCeEEecC-ccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6544331 244443 35677888999886 554 3555544 22 333433 24778999988
Q ss_pred HHc-CCCHHHHHHHH
Q 004918 509 VSL-GVDVFRIDSAI 522 (724)
Q Consensus 509 ~~~-Gv~~~~ID~a~ 522 (724)
.+. |+++.++-+++
T Consensus 254 ae~~GiD~~~v~~~~ 268 (432)
T 3pid_A 254 AESQGLNSKQIIEGV 268 (432)
T ss_dssp HHHTTCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHH
Confidence 876 99999988887
No 142
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=99.39 E-value=9.6e-13 Score=145.58 Aligned_cols=200 Identities=14% Similarity=0.080 Sum_probs=131.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHh------hcCcccccCc-
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA------LKMLKGVLDY- 382 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~------~~~i~~~~~~- 382 (724)
||+|||+|.||.++|..|+++|++|++||+++++++...+.. -.+........ .+++.+++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~----------~~i~e~~l~~~~~~~~~~g~l~~t~~~~ 71 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK----------SPIVEPGLEALLQQGRQTGRLSGTTDFK 71 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC----------CSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCC----------CCcCCCCHHHHHHhhcccCceEEeCCHH
Confidence 799999999999999999999999999999999887653210 00000000111 2457777787
Q ss_pred cCcCCCCEEEEcccCChH--------HHHHHHHHHHhhCCC---CcEEEecCCCCCHHH----HhcccCC--CCCE-EEE
Q 004918 383 SEFKDVDMVIEAVIESVP--------LKQKIFSELEKACPP---HCILATNTSTIDLNI----VGEKTSS--QDRI-IGA 444 (724)
Q Consensus 383 ~~~~~aDlVIeav~e~~~--------~k~~v~~~l~~~~~~---~~ii~s~ts~~~~~~----~~~~~~~--~~r~-ig~ 444 (724)
+++++||+||+|||.+.. ...++++++.+.+++ +++|+. .|+.++.. +...+.. ..++ +..
T Consensus 72 ~~~~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~~~~iVV~-~Stv~~g~t~~~l~~~l~~~~g~~~~~~~ 150 (436)
T 1mv8_A 72 KAVLDSDVSFICVGTPSKKNGDLDLGYIETVCREIGFAIREKSERHTVVV-RSTVLPGTVNNVVIPLIEDCSGKKAGVDF 150 (436)
T ss_dssp HHHHTCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHTTCCSCCEEEE-CSCCCTTHHHHTHHHHHHHHHSCCBTTTB
T ss_pred HHhccCCEEEEEcCCCcccCCCcchHHHHHHHHHHHHHhcccCCCcEEEE-eCCcCCCchHHHHHHHHHHhcCcccCCcE
Confidence 468999999999986553 245677889888888 888764 33443322 2222211 1111 000
Q ss_pred e-cCCCCCCCCee---------eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC-----CCchhhhhhh---hHHHHHHH
Q 004918 445 H-FFSPAHVMPLL---------EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN-----CTGFAVNRAF---FPYSQSAR 506 (724)
Q Consensus 445 h-~~~p~~~~~lv---------eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d-----~pG~i~nRl~---~~~~~Ea~ 506 (724)
+ .++|....+.. .++.|. +++++.+.+.++++.+|+. +++.+ ...++.|.+. .++++|+.
T Consensus 151 ~v~~~Pe~~~~G~~~~~~~~~~~iv~G~-~~~~~~~~~~~l~~~~~~~-v~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~ 228 (436)
T 1mv8_A 151 GVGTNPEFLRESTAIKDYDFPPMTVIGE-LDKQTGDLLEEIYRELDAP-IIRKTVEVAEMIKYTCNVWHAAKVTFANEIG 228 (436)
T ss_dssp EEEECCCCCCTTSHHHHHHSCSCEEEEE-SSHHHHHHHHHHHTTSSSC-EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECcccccccccchhccCCCEEEEEc-CCHHHHHHHHHHHhccCCC-EEcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 12444444332 244443 3688999999999999984 44444 2345667543 57889999
Q ss_pred HHHHc-CCCHHHHHHHH
Q 004918 507 LLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 507 ~l~~~-Gv~~~~ID~a~ 522 (724)
.+.+. |++++++..++
T Consensus 229 ~l~~~~Gid~~~v~~~~ 245 (436)
T 1mv8_A 229 NIAKAVGVDGREVMDVI 245 (436)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhCCCHHHHHHHh
Confidence 88877 89999999988
No 143
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.38 E-value=4e-13 Score=148.75 Aligned_cols=192 Identities=13% Similarity=0.040 Sum_probs=129.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc---
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS--- 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~--- 383 (724)
.++||+|||+|.||.+||..|+++|++|++||+++++++...+ .+.. -.++..+++++
T Consensus 3 ~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~-----------~g~~--------g~~i~~~~s~~e~v 63 (484)
T 4gwg_A 3 AQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA-----------NEAK--------GTKVVGAQSLKEMV 63 (484)
T ss_dssp CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH-----------TTTT--------TSSCEECSSHHHHH
T ss_pred CCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-----------cccC--------CCceeccCCHHHHH
Confidence 4578999999999999999999999999999999998776532 1100 01233344442
Q ss_pred -CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCCC---CCCCee
Q 004918 384 -EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLL 456 (724)
Q Consensus 384 -~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lv 456 (724)
.++++|+||.|||.+.. .++++.++.+.++++.+|++.+++.+.+ .+...+. ...+|++......+ ..++
T Consensus 64 ~~l~~aDvVil~Vp~~~~-v~~vl~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-- 140 (484)
T 4gwg_A 64 SKLKKPRRIILLVKAGQA-VDDFIEKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-- 140 (484)
T ss_dssp HTBCSSCEEEECSCSSHH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--
T ss_pred hhccCCCEEEEecCChHH-HHHHHHHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC--
Confidence 23469999999996544 4567789999999999998766665533 2333332 22345543211111 1122
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCee-------EEEcCC-Cch----hhhhhh---hHHHHHHHHHHHc--CCCHHHHH
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVP-------VVVGNC-TGF----AVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~-------v~v~d~-pG~----i~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID 519 (724)
-++.+. ++++++.++++++.+|..+ +++++. .|. +-|-+. ...++|++.+++. |++++++-
T Consensus 141 ~im~GG--~~ea~~~v~pll~~ig~~v~~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~ 218 (484)
T 4gwg_A 141 SLMPGG--NKEAWPHIKTIFQGIAAKVGTGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMA 218 (484)
T ss_dssp EEEEEE--CGGGHHHHHHHHHHHSCBCTTSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred eeecCC--CHHHHHHHHHHHHHhcCcccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 234443 5899999999999999877 666652 222 224332 3556799999976 88999998
Q ss_pred HHH
Q 004918 520 SAI 522 (724)
Q Consensus 520 ~a~ 522 (724)
.++
T Consensus 219 ~v~ 221 (484)
T 4gwg_A 219 QAF 221 (484)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 144
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=99.37 E-value=2.6e-12 Score=143.49 Aligned_cols=201 Identities=14% Similarity=0.165 Sum_probs=134.0
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCC--HHHHHHh-----hcCc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT--QDKANNA-----LKML 376 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~--~~~~~~~-----~~~i 376 (724)
++++||+|||+|.||.++|..|+++ |++|++||+++++++...+ +... ....... ..++
T Consensus 7 ~~~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~------------g~~~i~e~gl~~~~~~~~~~~l 74 (481)
T 2o3j_A 7 GKVSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNS------------DKLPIYEPGLDEIVFAARGRNL 74 (481)
T ss_dssp CCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTS------------SSCSSCCTTHHHHHHHHBTTTE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHC------------CCCCcCCCCHHHHHHHhhcCCE
Confidence 3457999999999999999999998 7999999999998876432 1110 0000111 1356
Q ss_pred ccccCc-cCcCCCCEEEEcccCCh-------------HHHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccCC--
Q 004918 377 KGVLDY-SEFKDVDMVIEAVIESV-------------PLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSS-- 437 (724)
Q Consensus 377 ~~~~~~-~~~~~aDlVIeav~e~~-------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~-- 437 (724)
.+++++ +++++||+||+|||... ....++++.+.++++++++|+. .|+.++. .+...+..
T Consensus 75 ~~t~~~~~~~~~aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~-~STv~~gt~~~l~~~l~~~~ 153 (481)
T 2o3j_A 75 FFSSDIPKAIAEADLIFISVNTPTKMYGRGKGMAPDLKYVESVSRTIAQYAGGPKIVVE-KSTVPVKAAESIGCILREAQ 153 (481)
T ss_dssp EEESCHHHHHHHCSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHHCCSCEEEEE-CSCCCTTHHHHHHHHHHHHT
T ss_pred EEECCHHHHhhcCCEEEEecCCccccccccccCCCcHHHHHHHHHHHHHhCCCCCEEEE-CCCCCCCHHHHHHHHHHHhh
Confidence 777776 67889999999998643 2467888899999999998874 3344432 23222211
Q ss_pred C----CC-EEEEecCCCCCCCCee---------eEecCCCCC---HHHHHHHHHHHHHcCC-eeEEEcC-----CCchhh
Q 004918 438 Q----DR-IIGAHFFSPAHVMPLL---------EIVRTERTS---AQVILDLMTVGKIIKK-VPVVVGN-----CTGFAV 494 (724)
Q Consensus 438 ~----~r-~ig~h~~~p~~~~~lv---------eii~~~~t~---~e~~~~~~~l~~~lGk-~~v~v~d-----~pG~i~ 494 (724)
. .. ++.. +|....+.. .++-|..++ +++.+.++++++.+++ .++++.+ ...++.
T Consensus 154 ~~~~~~d~~v~~---~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~ 230 (481)
T 2o3j_A 154 KNNENLKFQVLS---NPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAVAELVRIYENWVPRNRIITTNTWSSELSKLVA 230 (481)
T ss_dssp C----CCEEEEE---CCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHHHHHHHHHHTTSCGGGEEEEEHHHHHHHHHHH
T ss_pred CcCcCCceEEEe---CcccccccchhhcccCCCEEEEEecCchhhHHHHHHHHHHHHhhcCCCeEEecCHHHHHHHHHHH
Confidence 1 11 2333 333322221 244332222 3688999999999996 6777654 233555
Q ss_pred hhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 495 NRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 495 nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
|.+ ..+++||+..+.+. |++++++..++
T Consensus 231 N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~ 262 (481)
T 2o3j_A 231 NAFLAQRISSINSISAVCEATGAEISEVAHAV 262 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHH
Confidence 653 45788999998877 99999999888
No 145
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=99.37 E-value=7.7e-13 Score=145.10 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=76.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHh-hcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCCCCCCC
Q 004918 619 TEKEIVEMILFPVVNESCRVL-EEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS 697 (724)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l-~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~ 697 (724)
.+++++||++.++++||+.++ ++| + ++++||.++. ++|||+ |||+++|.+|+|+.+++++.+ .+.|+
T Consensus 232 ~pGfi~Nril~~~~~EA~~l~~~~G-a-~~e~ID~a~~-~~G~pm---GPf~l~D~vGlD~~~~i~~~~------~~~~~ 299 (460)
T 3k6j_A 232 CKSFVFNRLLHVYFDQSQKLMYEYG-Y-LPHQIDKIIT-NFGFLM---GPMTVADMNGFDVMEKLKKEN------GLEPN 299 (460)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTSC-C-CHHHHHHHHH-HHTBSS---CHHHHHHHHCTHHHHHHHHHS------CCCCC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcC-C-CHHHHHHHHH-HcCCCc---CHHHHHHHhchHHHHHHHHHh------ccCch
Confidence 479999999999999999999 777 6 8999999998 999999 999999999999999988765 24567
Q ss_pred HHHHHHH-------HcCCCCCCCCCC
Q 004918 698 RFLEERA-------TKGIPLSAPVSS 716 (724)
Q Consensus 698 ~~l~~~~-------k~g~gfy~~~~~ 716 (724)
++|++|+ |+|+|||+|++.
T Consensus 300 ~~l~~~v~~G~lG~KtG~GFY~y~~~ 325 (460)
T 3k6j_A 300 PIEKEMWRLKRYGRKTNKGFYKYDDK 325 (460)
T ss_dssp HHHHHHHHTTCCBGGGTBSSSEECTT
T ss_pred HHHHHHHHCCCCeeecCCEEEECCCC
Confidence 8999999 889999999653
No 146
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.36 E-value=2e-12 Score=135.64 Aligned_cols=140 Identities=16% Similarity=0.115 Sum_probs=106.6
Q ss_pred CcceEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 307 GVRKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 307 ~~~kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
.++||+||| +|.||+++|..|++.|++|++||++++. +..+.+
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~------------------------------------~~~~~~ 63 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA------------------------------------VAESIL 63 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG------------------------------------GHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc------------------------------------CHHHHh
Confidence 357899999 9999999999999999999999998752 001346
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccCCCCCEEEEecCCCCC----CCCeeeEe
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQDRIIGAHFFSPAH----VMPLLEIV 459 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~~r~ig~h~~~p~~----~~~lveii 459 (724)
++||+||.||| .....+++.++.+.++++++|++.+|... +..+.... +.++++.||..++. .+..+.++
T Consensus 64 ~~aDvVilavp--~~~~~~vl~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~~~~v~~hP~~g~~~~~~~g~~~~l~ 139 (298)
T 2pv7_A 64 ANADVVIVSVP--INLTLETIERLKPYLTENMLLADLTSVKREPLAKMLEVH--TGAVLGLHPMFGADIASMAKQVVVRC 139 (298)
T ss_dssp TTCSEEEECSC--GGGHHHHHHHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--SSEEEEEEECSCTTCSCCTTCEEEEE
T ss_pred cCCCEEEEeCC--HHHHHHHHHHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--CCCEEeeCCCCCCCchhhcCCeEEEe
Confidence 78999999999 55688999999998999998765544322 23333332 46899999965442 33345555
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 460 RTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
++. +++.++.+.++++.+|..++++.+
T Consensus 140 ~~~--~~~~~~~v~~l~~~~G~~~~~~~~ 166 (298)
T 2pv7_A 140 DGR--FPERYEWLLEQIQIWGAKIYQTNA 166 (298)
T ss_dssp EEE--CGGGTHHHHHHHHHTTCEEEECCH
T ss_pred cCC--CHHHHHHHHHHHHHcCCEEEECCH
Confidence 554 788899999999999999888753
No 147
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=99.36 E-value=2.5e-12 Score=143.32 Aligned_cols=193 Identities=14% Similarity=0.055 Sum_probs=131.0
Q ss_pred CCCcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-c
Q 004918 305 PRGVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-S 383 (724)
Q Consensus 305 ~~~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~ 383 (724)
++.-++|+|||+|.||.+||..|+++|++|++|||++++++...+... + ..+..++++ +
T Consensus 12 ~~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e 71 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENP---------G-----------KKLVPYYTVKE 71 (480)
T ss_dssp ---CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHST---------T-----------SCEEECSSHHH
T ss_pred ccCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCC---------C-----------CCeEEeCCHHH
Confidence 345578999999999999999999999999999999998776543110 0 124445555 3
Q ss_pred CcCC---CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC-CCCCEEEEecCCCC---CCCC
Q 004918 384 EFKD---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPA---HVMP 454 (724)
Q Consensus 384 ~~~~---aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~p~---~~~~ 454 (724)
.+++ ||+||.|||.+.. .++++.++.+.++++++|++.+++.+. ..+.+.+. ...+++++.....+ ..++
T Consensus 72 ~v~~l~~aDvVil~Vp~~~~-v~~vl~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~ 150 (480)
T 2zyd_A 72 FVESLETPRRILLMVKAGAG-TDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP 150 (480)
T ss_dssp HHHTBCSSCEEEECSCSSSH-HHHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC
T ss_pred HHhCCCCCCEEEEECCCHHH-HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC
Confidence 3444 9999999995444 456778899999999998876666644 23444332 23345544221111 1223
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCe-------eEEEcC-CCc----hhhhhhh---hHHHHHHHHHHHc--CCCHHH
Q 004918 455 LLEIVRTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFR 517 (724)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~-------~v~v~d-~pG----~i~nRl~---~~~~~Ea~~l~~~--Gv~~~~ 517 (724)
.++.+. +++.++.++++++.+|.. ++++++ ..| ++.|.+. ...+.|++.+.+. |+++++
T Consensus 151 --~i~~gg--~~~~~~~v~~ll~~~g~~~~dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~ 226 (480)
T 2zyd_A 151 --SIMPGG--QKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEE 226 (480)
T ss_dssp --EEEEES--CHHHHHHHHHHHHHHSCBCTTSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_pred --eEEecC--CHHHHHHHHHHHHHHhccccCCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 244443 589999999999999987 566654 222 2345543 4566799998876 999999
Q ss_pred HHHHH
Q 004918 518 IDSAI 522 (724)
Q Consensus 518 ID~a~ 522 (724)
+..++
T Consensus 227 ~~~l~ 231 (480)
T 2zyd_A 227 LAQTF 231 (480)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88776
No 148
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=99.35 E-value=1.7e-12 Score=145.03 Aligned_cols=191 Identities=13% Similarity=0.073 Sum_probs=131.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
-.+|+|||+|.||.+||..|+++|++|++|||++++++...+.. .. + ..+..++++ +.++
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~-------~~-~-----------~gi~~~~s~~e~v~ 70 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQSKVDHFLANE-------AK-G-----------KSIIGATSIEDFIS 70 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSHHHHHHHHTT-------TT-T-----------SSEECCSSHHHHHH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHccc-------cc-C-----------CCeEEeCCHHHHHh
Confidence 35899999999999999999999999999999999877653200 00 0 124445555 3344
Q ss_pred C---CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC-CCCCEEEEecCCCC---CCCCeee
Q 004918 387 D---VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFSPA---HVMPLLE 457 (724)
Q Consensus 387 ~---aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~p~---~~~~lve 457 (724)
+ ||+||.|||.+..+ +++++++.+.++++++|++.+++.+. ..+.+.+. ...+|+++.....+ ..++ .
T Consensus 71 ~l~~aDvVil~Vp~~~~v-~~vl~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~--~ 147 (497)
T 2p4q_A 71 KLKRPRKVMLLVKAGAPV-DALINQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP--S 147 (497)
T ss_dssp TSCSSCEEEECCCSSHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--E
T ss_pred cCCCCCEEEEEcCChHHH-HHHHHHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC--e
Confidence 4 99999999965544 56678899999999998876665543 23444332 22345544322211 1122 2
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe------eEEEc-CCCch----hhhhhh---hHHHHHHHHHHHc--CCCHHHHHHH
Q 004918 458 IVRTERTSAQVILDLMTVGKIIKKV------PVVVG-NCTGF----AVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~------~v~v~-d~pG~----i~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID~a 521 (724)
++.+. ++++++.++++++.+|+. +++++ ...|. +.|.+. ...+.|++.+.+. |++++++..+
T Consensus 148 im~gg--~~e~~~~v~~ll~~~g~~~dGe~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~ 225 (497)
T 2p4q_A 148 LMPGG--SEEAWPHIKNIFQSISAKSDGEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDV 225 (497)
T ss_dssp EEEEE--CGGGHHHHHHHHHHHSCEETTEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHhcCccCCCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHH
Confidence 44443 688999999999999988 66665 33443 346654 4667899998876 8999999988
Q ss_pred H
Q 004918 522 I 522 (724)
Q Consensus 522 ~ 522 (724)
+
T Consensus 226 ~ 226 (497)
T 2p4q_A 226 F 226 (497)
T ss_dssp H
T ss_pred H
Confidence 7
No 149
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=99.34 E-value=6.1e-12 Score=131.92 Aligned_cols=138 Identities=14% Similarity=0.070 Sum_probs=103.4
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEE
Q 004918 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (724)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (724)
++++++..+....+++.++... +-+|.|.-.++.+. |.+..+. .......+.+ ..+..+++|+|++|
T Consensus 139 G~~~~~~~~Ka~r~~~~A~~~~-~PlI~lvdt~Ga~~-g~~ae~~----------g~~~~~a~~l-~al~~~~vPvIavV 205 (327)
T 2f9i_A 139 GMAHPEGYRKALRLMKQAEKFN-RPIFTFIDTKGAYP-GKAAEER----------GQSESIATNL-IEMASLKVPVIAIV 205 (327)
T ss_dssp GCCCHHHHHHHHHHHHHHHHTT-CCEEEEEEESCSCC-CHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhcC-CCEEEEEeCCCCCc-chhhhhh----------hhHHHHHHHH-HHHHhCCCCEEEEE
Confidence 6899999999999999988764 55666643333222 2221111 1122334455 56899999999999
Q ss_pred CccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecC
Q 004918 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (724)
Q Consensus 106 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~ 185 (724)
+|.|.|||+.++++||+++|+++++|++ +.|.++++.++.+..+...+.++ ..++|++|+++|+||+|+|
T Consensus 206 ~G~a~GGGa~~~~~~D~via~~~A~~~v------~~peg~a~il~~~~~~a~~A~e~----~~itA~~a~~~GlVd~VV~ 275 (327)
T 2f9i_A 206 IGEGGSGGALGIGIANKVLMLENSTYSV------ISPEGAAALLWKDSNLAKIAAET----MKITAHDIKQLGIIDDVIS 275 (327)
T ss_dssp EEEEBHHHHHTTCCCSEEEEETTCBCBS------SCHHHHHHHHSSCGGGHHHHHHH----HTCBHHHHHHTTSSSEEEC
T ss_pred ECCcChHHHHHHHCCCEEEEcCCceEee------cCchHHHHHHHHHhcchHHHHHH----cCCCHHHHHHcCCceEEec
Confidence 9999999999999999999999999996 34666666655555555777777 7899999999999999998
Q ss_pred c
Q 004918 186 S 186 (724)
Q Consensus 186 ~ 186 (724)
.
T Consensus 276 e 276 (327)
T 2f9i_A 276 E 276 (327)
T ss_dssp C
T ss_pred C
Confidence 3
No 150
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=99.33 E-value=7.5e-12 Score=139.63 Aligned_cols=190 Identities=13% Similarity=0.029 Sum_probs=130.0
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
.+||+|||+|.||..+|..|+++|++|++|||++++++...+... + ..+..++++ +.++
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~---------~-----------~gi~~~~s~~e~v~ 64 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQ---------D-----------KNLVFTKTLEEFVG 64 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTT---------T-----------SCEEECSSHHHHHH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCc---------C-----------CCeEEeCCHHHHHh
Confidence 468999999999999999999999999999999998776543110 0 124444555 3344
Q ss_pred ---CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccCC-CCCEEEEecCCCC---CCCCeee
Q 004918 387 ---DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLE 457 (724)
Q Consensus 387 ---~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~-~~r~ig~h~~~p~---~~~~lve 457 (724)
++|+||+|||.+..+ ..+++++.+.++++++|++.+++.+. ..+.+.+.. ..+++++....++ ..++ .
T Consensus 65 ~l~~aDvVilavp~~~~v-~~vl~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~ 141 (474)
T 2iz1_A 65 SLEKPRRIMLMVQAGAAT-DATIKSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP--S 141 (474)
T ss_dssp TBCSSCEEEECCCTTHHH-HHHHHHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC--C
T ss_pred hccCCCEEEEEccCchHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC--e
Confidence 499999999955444 46678898999999988876666543 345544432 2345544222111 1122 1
Q ss_pred EecCCCCCHHHHHHHHHHHHHcCCe--------eEEEcC-CCc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHHH
Q 004918 458 IVRTERTSAQVILDLMTVGKIIKKV--------PVVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRID 519 (724)
Q Consensus 458 ii~~~~t~~e~~~~~~~l~~~lGk~--------~v~v~d-~pG----~i~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID 519 (724)
++++. +++.++.++++++.+|.. +.++++ ..| ++.|.+. ...+.|++.+.+. |++++++.
T Consensus 142 i~~gg--~~~~~~~v~~ll~~~g~~~~~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~ 219 (474)
T 2iz1_A 142 MMPGG--QKEAYDLVAPIFEQIAAKAPQDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQ 219 (474)
T ss_dssp EEEEE--CHHHHHHHHHHHHHHSCBCTTTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHH
T ss_pred EEecC--CHHHHHHHHHHHHHHhcccccCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 34443 789999999999999987 455554 223 3446553 4567799998875 89999998
Q ss_pred HHH
Q 004918 520 SAI 522 (724)
Q Consensus 520 ~a~ 522 (724)
.++
T Consensus 220 ~l~ 222 (474)
T 2iz1_A 220 AIF 222 (474)
T ss_dssp HHH
T ss_pred HHH
Confidence 887
No 151
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=99.32 E-value=2.9e-12 Score=133.74 Aligned_cols=184 Identities=15% Similarity=0.070 Sum_probs=122.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
|+||+|||+|.||..+|..|++ |++|++||+++++++...+. | +..++..+.+++
T Consensus 1 M~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-----------g-------------~~~~~~~~~~~~ 55 (289)
T 2cvz_A 1 MEKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-----------F-------------GSEAVPLERVAE 55 (289)
T ss_dssp -CCEEEECCSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-----------H-------------CCEECCGGGGGG
T ss_pred CCeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-----------C-------------CcccCHHHHHhC
Confidence 3589999999999999999999 99999999999887664321 1 111222255789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccCCC-CCEEEEecCCC-C---CCCCeeeEec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTSSQ-DRIIGAHFFSP-A---HVMPLLEIVR 460 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~~~-~r~ig~h~~~p-~---~~~~lveii~ 460 (724)
+|+||+|+|.+..+ ..+++++.+.++++++|++.++..+ ...+.+.+... .+++.. +..+ + ..+.+..++.
T Consensus 56 ~D~vi~~v~~~~~~-~~v~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~-p~~~~~~~~~~g~~~~~~~ 133 (289)
T 2cvz_A 56 ARVIFTCLPTTREV-YEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA-PVSGGTSGAEAGTLTVMLG 133 (289)
T ss_dssp CSEEEECCSSHHHH-HHHHHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEEC-CEESHHHHHHHTCEEEEEE
T ss_pred CCEEEEeCCChHHH-HHHHHHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEe-cCCCChhHHhhCCeEEEEC
Confidence 99999999955444 4567888888888988874433322 23455544322 233332 2111 1 0112233333
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCC-Cch----hhhhh---hhHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 461 TERTSAQVILDLMTVGKIIKKVPVVVGNC-TGF----AVNRA---FFPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~-pG~----i~nRl---~~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
.+++.++.+.+++ .+|+.++++++. .+. +.|.+ +...++|++.+.+. |++++++..++
T Consensus 134 ---~~~~~~~~~~~ll-~~g~~~~~~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~ 200 (289)
T 2cvz_A 134 ---GPEEAVERVRPFL-AYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVI 200 (289)
T ss_dssp ---SCHHHHHHHGGGC-TTEEEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred ---CCHHHHHHHHHHH-hhcCCeEEcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHH
Confidence 2789999999999 999988888653 222 23543 34667899888865 89999988887
No 152
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.31 E-value=4.3e-12 Score=135.44 Aligned_cols=182 Identities=16% Similarity=0.088 Sum_probs=122.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHH-HHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
.+||+|||+|.||.++|..|...|++|+++|++++. .+.+. +.| +..+ +. +.+
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~-----------~~G-------------~~~~-~~~e~~ 70 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE-----------AHG-------------LKVA-DVKTAV 70 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH-----------HTT-------------CEEE-CHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH-----------HCC-------------CEEc-cHHHHH
Confidence 358999999999999999999999999999999765 22221 112 1222 44 567
Q ss_pred CCCCEEEEcccCChHHHHHHHH-HHHhhCCCCcEEEecCCCCCHHHHhccc-CCCCCEEEEecCCCCCC---------CC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFS-ELEKACPPHCILATNTSTIDLNIVGEKT-SSQDRIIGAHFFSPAHV---------MP 454 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~-~l~~~~~~~~ii~s~ts~~~~~~~~~~~-~~~~r~ig~h~~~p~~~---------~~ 454 (724)
++||+||+|+| ......++. ++.+.++++++|++. +++.+ .+.... .....+++.||..|.+. +.
T Consensus 71 ~~aDvVilavp--~~~~~~v~~~~i~~~l~~~~ivi~~-~gv~~-~~~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g~ 146 (338)
T 1np3_A 71 AAADVVMILTP--DEFQGRLYKEEIEPNLKKGATLAFA-HGFSI-HYNQVVPRADLDVIMIAPKAPGHTVRSEFVKGGGI 146 (338)
T ss_dssp HTCSEEEECSC--HHHHHHHHHHHTGGGCCTTCEEEES-CCHHH-HTTSSCCCTTCEEEEEEESSCSHHHHHHHHTTCCC
T ss_pred hcCCEEEEeCC--cHHHHHHHHHHHHhhCCCCCEEEEc-CCchh-HHHhhcCCCCcEEEeccCCCCchhHHHHHhccCCC
Confidence 89999999999 555688888 898899999988865 44443 332222 11235899999766531 33
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCC-e--eEEEc----C-CCchhhhhhhh----HHHHHHH-HHHHcCCCHHHH
Q 004918 455 LLEIVRTERTSAQVILDLMTVGKIIKK-V--PVVVG----N-CTGFAVNRAFF----PYSQSAR-LLVSLGVDVFRI 518 (724)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk-~--~v~v~----d-~pG~i~nRl~~----~~~~Ea~-~l~~~Gv~~~~I 518 (724)
.+-++++..++++..+.+..+++.+|. . ++.+. + ...++.+..+. +++..++ .+++.|+++++.
T Consensus 147 ~~ii~~~~~~~~~a~~~~~~l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a 223 (338)
T 1np3_A 147 PDLIAIYQDASGNAKNVALSYACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA 223 (338)
T ss_dssp CEEEEEEECSSSCHHHHHHHHHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred eEEEEecCCCCHHHHHHHHHHHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence 344566667788999999999999998 4 55552 1 22344343332 2333333 335678877644
No 153
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=99.30 E-value=8.2e-12 Score=124.13 Aligned_cols=156 Identities=15% Similarity=0.167 Sum_probs=113.3
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 310 kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
||+||| +|.||..++..|++.|++|+++||++++.+...+.+.. .+.. ..+.. ++. +.+++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~------------~~~~~-~~~~~~~~~ 64 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR----IAGD------------ASITG-MKNEDAAEA 64 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH----HHSS------------CCEEE-EEHHHHHHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc----cccc------------CCCCh-hhHHHHHhc
Confidence 799999 99999999999999999999999999887665432211 1110 11222 233 45788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--------------HHHHhcccCCCCCEEEEecCCCC---
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--------------LNIVGEKTSSQDRIIGAHFFSPA--- 450 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--------------~~~~~~~~~~~~r~ig~h~~~p~--- 450 (724)
+|+||.|+| ....++++.++.+.++ ++++++.++++. ..++++.+. ..+++..|+..|.
T Consensus 65 ~D~Vi~~~~--~~~~~~~~~~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~-~~~~v~~~~~~~~~~~ 140 (212)
T 1jay_A 65 CDIAVLTIP--WEHAIDTARDLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE-SEKVVSALHTIPAARF 140 (212)
T ss_dssp CSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT-CSCEEECCTTCCHHHH
T ss_pred CCEEEEeCC--hhhHHHHHHHHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC-CCeEEEEccchHHHHh
Confidence 999999999 5556688888877664 888888888665 566776665 3677776543322
Q ss_pred ----CCCCeeeEecCCCCCHHHHHHHHHHHHHc-CCeeEEEcC
Q 004918 451 ----HVMPLLEIVRTERTSAQVILDLMTVGKII-KKVPVVVGN 488 (724)
Q Consensus 451 ----~~~~lveii~~~~t~~e~~~~~~~l~~~l-Gk~~v~v~d 488 (724)
....+..+++++ +++.++.+.++++.+ |+.++++++
T Consensus 141 ~~~~~~~~~~~~~~g~--~~~~~~~v~~l~~~~~G~~~~~~~~ 181 (212)
T 1jay_A 141 ANLDEKFDWDVPVCGD--DDESKKVVMSLISEIDGLRPLDAGP 181 (212)
T ss_dssp HCTTCCCCEEEEEEES--CHHHHHHHHHHHHHSTTEEEEEEES
T ss_pred hCcCCCCCccEEEECC--cHHHHHHHHHHHHHcCCCCceeccc
Confidence 122345566665 689999999999999 999999876
No 154
>2f9y_A Acetyl-COA carboxylase, carboxyltransferase alpha; zinc ribbon, crotonase superfamily, spiral domain, ligase; 3.20A {Escherichia coli} SCOP: c.14.1.4
Probab=99.29 E-value=1.1e-11 Score=130.41 Aligned_cols=138 Identities=14% Similarity=0.038 Sum_probs=107.5
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEE
Q 004918 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (724)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (724)
+++++...+...++++.++.. .+-+|.|.-.++.+. |....+. .........+ ..+..+++|+|++|
T Consensus 153 G~~~~~~~~Ka~r~~~~A~~~-~lPlI~lvDt~Ga~~-g~~aE~~----------g~~~~~a~~l-~al~~~~vPvIavV 219 (339)
T 2f9y_A 153 GMPAPEGYRKALRLMQMAERF-KMPIITFIDTPGAYP-GVGAEER----------GQSEAIARNL-REMSRLGVPVVCTV 219 (339)
T ss_dssp GCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEESCSCC-SHHHHHT----------THHHHHHHHH-HHHHTCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHHhhc-CCCEEEEEeCCCCcc-chHHHHH----------HHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 689999999999999988866 455666643333322 2221111 1122334455 56889999999999
Q ss_pred CccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHHHHCCCcceecC
Q 004918 106 EGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVT 185 (724)
Q Consensus 106 ~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA~~~Glv~~vv~ 185 (724)
+|.|.|||+.++++||++||.++++|++ +.|.++++.++++..+...|.++ ..++|++|+++|+||+|+|
T Consensus 220 ~G~a~GGGa~~~~~~D~via~p~A~~~v------~~Peg~asil~~~~~~~~~Aae~----~~itA~~a~~~GlVd~VV~ 289 (339)
T 2f9y_A 220 IGEGGSGGALAIGVGDKVNMLQYSTYSV------ISPEGCASILWKSADKAPLAAEA----MGIIRPRLKELKLIDSIIP 289 (339)
T ss_dssp EEEEEHHHHHTTCCCSEEEECTTCEEES------SCHHHHHHHHSSCSTTHHHHHHH----HTCSHHHHHTTTSCSCCCC
T ss_pred eCCcCcHHHHHHhccCeeeecCCCEEEe------eccchHHHHHHHhhccHHHHHHH----cCCCHHHHHHcCCeeEEec
Confidence 9999999999999999999999999997 46777888888888788888888 6799999999999999998
Q ss_pred c
Q 004918 186 S 186 (724)
Q Consensus 186 ~ 186 (724)
.
T Consensus 290 e 290 (339)
T 2f9y_A 290 E 290 (339)
T ss_dssp C
T ss_pred C
Confidence 3
No 155
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=99.29 E-value=1.7e-11 Score=126.20 Aligned_cols=173 Identities=14% Similarity=0.092 Sum_probs=113.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeC--CHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
||+|||+|.||.++|..|+++|++|++||+ +++.++...+ .| +. ++. +.++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~~~~~~~~~~~~~-----------~g-------------~~--~~~~~~~~ 55 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERART-----------VG-------------VT--ETSEEDVY 55 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHH-----------HT-------------CE--ECCHHHHH
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCCccCHHHHHHHHH-----------CC-------------Cc--CCHHHHHh
Confidence 799999999999999999999999999999 6666554321 12 11 233 5568
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH---HHHhcccCCCCCEEEEecCCCCC---CCCeeeEec
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL---NIVGEKTSSQDRIIGAHFFSPAH---VMPLLEIVR 460 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~---~~~~~~~~~~~r~ig~h~~~p~~---~~~lveii~ 460 (724)
+||+||+|||.+...+. +.++.+.+++ +|++. |+..+ ..+.+.+.... ++..+++.++. .+.. .++.
T Consensus 56 ~aDvvi~~v~~~~~~~~--~~~~~~~~~~--~vi~~-s~~~~~~~~~l~~~~~~~g-~~~~~v~~~~~~~~~g~~-~~~~ 128 (264)
T 1i36_A 56 SCPVVISAVTPGVALGA--ARRAGRHVRG--IYVDI-NNISPETVRMASSLIEKGG-FVDAAIMGSVRRKGADIR-IIAS 128 (264)
T ss_dssp TSSEEEECSCGGGHHHH--HHHHHTTCCS--EEEEC-SCCCHHHHHHHHHHCSSSE-EEEEEECSCHHHHGGGCE-EEEE
T ss_pred cCCEEEEECCCHHHHHH--HHHHHHhcCc--EEEEc-cCCCHHHHHHHHHHHhhCC-eeeeeeeCCccccccCCe-EEec
Confidence 99999999996544432 3567776766 55443 45443 35555555443 66666655442 2233 3444
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch-----hhhhhh----hHHHHHHHHHHHc-CCCHHHHHHHH
Q 004918 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGF-----AVNRAF----FPYSQSARLLVSL-GVDVFRIDSAI 522 (724)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~-----i~nRl~----~~~~~Ea~~l~~~-Gv~~~~ID~a~ 522 (724)
++. . +.+++ ++.+|+.++++++.+|. +++..+ ...++|++.+.+. |++++.+ ..+
T Consensus 129 g~~--~---~~~~~-l~~~g~~~~~~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~-~~~ 193 (264)
T 1i36_A 129 GRD--A---EEFMK-LNRYGLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEEDVL-EML 193 (264)
T ss_dssp STT--H---HHHHG-GGGGTCEEEECSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH-HHH
T ss_pred CCc--H---HHhhh-HHHcCCeeEECCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH-HHH
Confidence 432 2 67788 99999998888765554 333332 4566798887755 8987644 444
No 156
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=99.28 E-value=2.8e-12 Score=149.71 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCCC-CCCCH
Q 004918 620 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNF-FKPSR 698 (724)
Q Consensus 620 ~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~-~~p~~ 698 (724)
+++++||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++ |.| +
T Consensus 494 ~Gfi~Nril~~~~~Ea~~l~~~G-~-~~e~id~~~-~~~g~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~-~ 566 (725)
T 2wtb_A 494 TGFAVNRMFFPYTQAAMFLVECG-A-DPYLIDRAI-SKFGMPM---GPFRLCDLVGFGVAIATATQFIENFSERTYKS-M 566 (725)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHSGGGCCCC-T
T ss_pred ccHHHHHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhchHHHHHHHHHHHHhcCCccCCh-H
Confidence 68999999999999999999999 5 799999999 8999999 9999999999999999999999888776 888 8
Q ss_pred HHHHHH-------HcCCCCCCCCC
Q 004918 699 FLEERA-------TKGIPLSAPVS 715 (724)
Q Consensus 699 ~l~~~~-------k~g~gfy~~~~ 715 (724)
++++|+ |+|+|||+|++
T Consensus 567 ~l~~~v~~g~lG~k~g~GfY~y~g 590 (725)
T 2wtb_A 567 IIPLMQEDKRAGEATRKGFYLYDD 590 (725)
T ss_dssp HHHHHHTTC---------------
T ss_pred HHHHHHHCCCceecCCceeEeCCC
Confidence 999999 89999999953
No 157
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=99.27 E-value=2e-12 Score=150.95 Aligned_cols=89 Identities=17% Similarity=0.237 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHHHHhhhCCCCCCC--
Q 004918 620 EKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKKWSQLYGNFFKPS-- 697 (724)
Q Consensus 620 ~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~~~~~~~~~~~p~-- 697 (724)
+++++||++.++++|++.++++| + ++++||.++ .++|||+ |||+++|.+|+|+.+++++.+++.++++|.|+
T Consensus 496 ~Gfi~Nril~~~~~Ea~~l~~~G-~-~~~~id~~~-~~~G~p~---Gp~~l~D~vGld~~~~i~~~~~~~~~~~~~~~~~ 569 (715)
T 1wdk_A 496 PGFLVNRVLFPYFGGFAKLVSAG-V-DFVRIDKVM-EKFGWPM---GPAYLMDVVGIDTGHHGRDVMAEGFPDRMKDDRR 569 (715)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHTT-C-CHHHHHHHH-HHHTCSS---CHHHHHHHHCHHHHHHHHHHHHHHCHHHHCCSSC
T ss_pred CChhhhHHHHHHHHHHHHHHHCC-C-CHHHHHHHH-HHcCCCC---CHHHHHHHhhHHHHHHHHHHHHHhcCCccCCChH
Confidence 68899999999999999999999 5 799999999 8999998 99999999999999999999998887788888
Q ss_pred HHHHHHH-------HcCCCCCCCC
Q 004918 698 RFLEERA-------TKGIPLSAPV 714 (724)
Q Consensus 698 ~~l~~~~-------k~g~gfy~~~ 714 (724)
++|++|+ |+|+|||+|+
T Consensus 570 ~~l~~~v~~g~lG~k~g~GfY~y~ 593 (715)
T 1wdk_A 570 SAIDALYEAKRLGQKNGKGFYAYE 593 (715)
T ss_dssp CHHHHHHHTTCCBTTTTBSSSEEC
T ss_pred HHHHHHHhCchhhhcCCcEEEecc
Confidence 8999999 8899999995
No 158
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.26 E-value=3.1e-11 Score=122.91 Aligned_cols=165 Identities=13% Similarity=0.092 Sum_probs=101.6
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHH-HHH-HHHHHHHH-HHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLK-GIKTIEAN-VRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~-~~~-~~~~i~~~-~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
..+||+|||+|.||.+||..|+++|++|++|||+++. +.+ ......+. +..+.+ ..+.+..++..+
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~e 86 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLP-----------EHPHVHLAAFAD 86 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGG-----------GSTTCEEEEHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHh-----------hcCceeccCHHH
Confidence 4579999999999999999999999999999999986 111 00000000 000111 111223333336
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHH-HhhCCCCcEEEecCCCC----------------CHH-HHhcccCCCCCEE-EE
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSEL-EKACPPHCILATNTSTI----------------DLN-IVGEKTSSQDRII-GA 444 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l-~~~~~~~~ii~s~ts~~----------------~~~-~~~~~~~~~~r~i-g~ 444 (724)
.+++||+||.||| .+...+++.++ .+.+ ++++|++.+.++ .+. .+++.++ ..+++ ++
T Consensus 87 ~~~~aDvVilavp--~~~~~~~~~~i~~~~l-~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~-~~~vv~~~ 162 (245)
T 3dtt_A 87 VAAGAELVVNATE--GASSIAALTAAGAENL-AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFP-EAKVVKTL 162 (245)
T ss_dssp HHHHCSEEEECSC--GGGHHHHHHHHCHHHH-TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHST-TSEEEECS
T ss_pred HHhcCCEEEEccC--cHHHHHHHHHhhhhhc-CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCC-CCeEEEee
Confidence 6789999999999 44444666677 6666 777887666321 232 3444443 24555 34
Q ss_pred ecCCCC--------CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCee-EEEcC
Q 004918 445 HFFSPA--------HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVP-VVVGN 488 (724)
Q Consensus 445 h~~~p~--------~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~-v~v~d 488 (724)
++...+ ..+++..++.+. ++++.+.++++++.+|+.+ +.+++
T Consensus 163 ~~~~a~v~~~~~~a~~g~~~~~v~g~--d~~~~~~v~~ll~~~g~~~~~~~G~ 213 (245)
T 3dtt_A 163 NTMNASLMVDPGRAAGGDHSVFVSGN--DAAAKAEVATLLKSLGHQDVIDLGD 213 (245)
T ss_dssp TTSCHHHHHCGGGTGGGCCCEEEECS--CHHHHHHHHHHHHHTTCCCEEEEES
T ss_pred cccCHHHhcCccccCCCCeeEEEECC--CHHHHHHHHHHHHHcCCCceeccCc
Confidence 443211 122333344453 7999999999999999764 77776
No 159
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=99.24 E-value=8.5e-12 Score=132.32 Aligned_cols=122 Identities=17% Similarity=0.246 Sum_probs=90.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+||+|||+|.||.++|..++.+|+ +|++||++++.++.....+.+..... ....++..+++++++++
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~~ 82 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALI------------GSPAKIFGENNYEYLQN 82 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHH------------TCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhcc------------CCCCEEEECCCHHHHCC
Confidence 589999999999999999999999 99999999998886444443332211 01246777788899999
Q ss_pred CCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCcEE--EecCCCCCHHHHhcccC--CCCCEEEE
Q 004918 388 VDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIGA 444 (724)
Q Consensus 388 aDlVIeav--~e------------~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~--~~~r~ig~ 444 (724)
||+||+++ |+ +..+++++++++.+++ +++++ +||++... +.+..... +|+|++|+
T Consensus 83 aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~~~-t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 83 SDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLDAM-VYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp CSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEEES
T ss_pred CCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchHHH-HHHHHHhcCCChhhEEEe
Confidence 99999998 54 4577999999999998 55655 46655543 34443333 56788775
No 160
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=99.23 E-value=2.1e-11 Score=120.98 Aligned_cols=135 Identities=13% Similarity=0.075 Sum_probs=101.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
.++||+|||+|.||+++|..|+++|++|++||++++ .++
T Consensus 18 ~~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~-----------------------------------------~~~ 56 (209)
T 2raf_A 18 QGMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ-----------------------------------------ATT 56 (209)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC-----------------------------------------CSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH-----------------------------------------Hhc
Confidence 356899999999999999999999999999998864 356
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC---------------HHHHhcccCCCCCEEE-EecCCCC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID---------------LNIVGEKTSSQDRIIG-AHFFSPA 450 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~---------------~~~~~~~~~~~~r~ig-~h~~~p~ 450 (724)
+||+||+|+| ....+++++++.+.++ +++|++.+++++ ...+++.++ ..+++. .|+...|
T Consensus 57 ~aD~vi~av~--~~~~~~v~~~l~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~-~~~vv~~~~~~~~p 132 (209)
T 2raf_A 57 LGEIVIMAVP--YPALAALAKQYATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP-DSQVLKAFNTTFAA 132 (209)
T ss_dssp CCSEEEECSC--HHHHHHHHHHTHHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT-TSEEEECSTTSCHH
T ss_pred cCCEEEEcCC--cHHHHHHHHHHHHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC-CCcEEEeeecccHh
Confidence 8999999999 6667788888888887 888888777654 234444443 356777 5654322
Q ss_pred C------C--CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 451 H------V--MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 451 ~------~--~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
. . .+...++.+ .+++..+.++++++.+|..++.+++
T Consensus 133 ~~~~~~~~g~~~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~~~ 176 (209)
T 2raf_A 133 TLQSGQVNGKEPTTVLVAG--NDDSAKQRFTRALADSPLEVKDAGK 176 (209)
T ss_dssp HHHHSEETTTEECEEEEEE--SCHHHHHHHHHHTTTSSCEEEEEES
T ss_pred hccccccCCCCCceeEEcC--CCHHHHHHHHHHHHHcCCceEeCCC
Confidence 1 1 122222333 3689999999999999999988877
No 161
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=99.22 E-value=4.5e-11 Score=133.28 Aligned_cols=193 Identities=12% Similarity=0.053 Sum_probs=128.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc-CcC--
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK-- 386 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~-- 386 (724)
||+|||+|.||..+|..|+++|++|++|||++++++...+.. |... . ...+..+++++ .++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~----------g~~~-~-----~~~i~~~~~~~e~v~~l 66 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN----------ASAP-F-----AGNLKAFETMEAFAASL 66 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT----------TTST-T-----GGGEEECSCHHHHHHHB
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------CCCC-C-----CCCeEEECCHHHHHhcc
Confidence 799999999999999999999999999999999877654311 1000 0 01244455653 333
Q ss_pred -CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccCC-CCCEEEEecCCCC---CCCCeeeEe
Q 004918 387 -DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSS-QDRIIGAHFFSPA---HVMPLLEIV 459 (724)
Q Consensus 387 -~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~-~~r~ig~h~~~p~---~~~~lveii 459 (724)
++|+||+|||....+ .++++++.+.++++++|++.+++.+. ..+.+.+.. ...++++....++ ..++ .++
T Consensus 67 ~~aDvVilaVp~~~~v-~~vl~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~--~i~ 143 (478)
T 1pgj_A 67 KKPRKALILVQAGAAT-DSTIEQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP--AFF 143 (478)
T ss_dssp CSSCEEEECCCCSHHH-HHHHHHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC--EEE
T ss_pred cCCCEEEEecCChHHH-HHHHHHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC--eEe
Confidence 599999999965444 56678898999999988876655543 244444432 2345544322211 1122 234
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCe-------eEEEcC-CCch----hhhhhh---hHHHHHHHHHHHc-CCCHHHHHHHHH
Q 004918 460 RTERTSAQVILDLMTVGKIIKKV-------PVVVGN-CTGF----AVNRAF---FPYSQSARLLVSL-GVDVFRIDSAIR 523 (724)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lGk~-------~v~v~d-~pG~----i~nRl~---~~~~~Ea~~l~~~-Gv~~~~ID~a~~ 523 (724)
.+. +++..+.++++++.+|.. ++++++ ..|. +.|.+. ..++.|++.+.+. |++++++..++.
T Consensus 144 ~gg--~~~~~~~v~~ll~~~g~~~~dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~ 221 (478)
T 1pgj_A 144 PGG--TLSVWEEIRPIVEAAAAKADDGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLE 221 (478)
T ss_dssp EEE--CHHHHHHHHHHHHHHSCBCTTSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred ccC--CHHHHHHHHHHHHHhcccccCCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 433 689999999999999987 555554 2222 335443 4567899888866 899999888873
No 162
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=99.21 E-value=3e-11 Score=135.07 Aligned_cols=191 Identities=13% Similarity=0.069 Sum_probs=128.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-c--
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F-- 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~-- 385 (724)
+||+|||+|.||..+|..|+++|++|++|||++++++...+. .. .| ..+..++++++ +
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~------~~--~g-----------~gi~~~~~~~e~v~~ 63 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN------EA--KG-----------TKVLGAHSLEEMVSK 63 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT------TT--TT-----------SSCEECSSHHHHHHH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc------cc--cC-----------CCeEEeCCHHHHHhh
Confidence 479999999999999999999999999999999987765321 00 01 12344555533 3
Q ss_pred -CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCCCC---CCCCeeeE
Q 004918 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFSPA---HVMPLLEI 458 (724)
Q Consensus 386 -~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~p~---~~~~lvei 458 (724)
+++|+||+|||.... ...++.++.+.++++++|++.+++.+.. .+.+.+. ....++++....++ ..++ .+
T Consensus 64 l~~aDvVilaVp~~~~-v~~vl~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~--~i 140 (482)
T 2pgd_A 64 LKKPRRIILLVKAGQA-VDNFIEKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP--SL 140 (482)
T ss_dssp BCSSCEEEECSCTTHH-HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC--EE
T ss_pred ccCCCEEEEeCCChHH-HHHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC--eE
Confidence 589999999995544 4466788989999999888766665532 3443332 22345554322211 1122 23
Q ss_pred ecCCCCCHHHHHHHHHHHHHcCCee-------EEEcC-CCc----hhhhhhh---hHHHHHHHHHHHc--CCCHHHHHHH
Q 004918 459 VRTERTSAQVILDLMTVGKIIKKVP-------VVVGN-CTG----FAVNRAF---FPYSQSARLLVSL--GVDVFRIDSA 521 (724)
Q Consensus 459 i~~~~t~~e~~~~~~~l~~~lGk~~-------v~v~d-~pG----~i~nRl~---~~~~~Ea~~l~~~--Gv~~~~ID~a 521 (724)
+.+. +++.++.++++++.+|..+ +++++ ..| ++.|.+. ...+.|++.+.+. |++++++..+
T Consensus 141 ~~gg--~~e~~~~v~~ll~~~g~~v~d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~ 218 (482)
T 2pgd_A 141 MPGG--NKEAWPHIKAIFQGIAAKVGTGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKA 218 (482)
T ss_dssp EEEE--CTTTHHHHHHHHHHHSCBCTTSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred EeCC--CHHHHHHHHHHHHHhhhhccCCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHH
Confidence 4443 4778999999999999876 44432 223 3446553 4567899988864 8899999888
Q ss_pred HH
Q 004918 522 IR 523 (724)
Q Consensus 522 ~~ 523 (724)
+.
T Consensus 219 ~~ 220 (482)
T 2pgd_A 219 FE 220 (482)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 163
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=99.20 E-value=1.5e-10 Score=126.14 Aligned_cols=204 Identities=17% Similarity=0.141 Sum_probs=130.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH--------HHHHHHhhHhcCCCCHHHHHHhhcCccc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT--------IEANVRGLVTRGKLTQDKANNALKMLKG 378 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~--------i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (724)
.|.+|+|||+|.+|..+|.+|++.||+|+++|+|+++++...+. ++..+.+.++ -+++.+
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~------------~g~l~~ 87 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALS------------SGRLSF 87 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHH------------TTCEEE
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHH------------cCCeeE
Confidence 57899999999999999999999999999999999998875431 1111111122 246788
Q ss_pred ccCc-cCcCCCCEEEEcccC--------ChHHHHHHHHHHHhhCC---CCcEEEecCCCCCHH---HHh-----cccCCC
Q 004918 379 VLDY-SEFKDVDMVIEAVIE--------SVPLKQKIFSELEKACP---PHCILATNTSTIDLN---IVG-----EKTSSQ 438 (724)
Q Consensus 379 ~~~~-~~~~~aDlVIeav~e--------~~~~k~~v~~~l~~~~~---~~~ii~s~ts~~~~~---~~~-----~~~~~~ 438 (724)
+++. +++++||++|.|||. |+.......+.+.++++ ++.+|+. .||.++. ++. +.....
T Consensus 88 tt~~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~-eSTVppGtte~~~~~~l~~~~~~~ 166 (444)
T 3vtf_A 88 AESAEEAVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVV-KSTVPPGTTEGLVARAVAEEAGGV 166 (444)
T ss_dssp CSSHHHHHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEE-CSCCCTTTTTTHHHHHHHTTTTTC
T ss_pred EcCHHHHHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEE-eCCCCCchHHHHHHHHHHHhCCCC
Confidence 8887 568999999999974 44556667777776664 4555543 3443332 111 111111
Q ss_pred CCEEEEecCCCCCCCCe---------eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC----CCchhhhhh---hhHHH
Q 004918 439 DRIIGAHFFSPAHVMPL---------LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN----CTGFAVNRA---FFPYS 502 (724)
Q Consensus 439 ~r~ig~h~~~p~~~~~l---------veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d----~pG~i~nRl---~~~~~ 502 (724)
.-.++. +|-...+. --++-| .+++++.+.+..+++.+....+++.. ..-++.|-+ -.+++
T Consensus 167 ~f~v~~---~PErl~eG~a~~d~~~~~riViG-~~~~~a~~~~~~ly~~~~~~~~~~~~~~AE~~Kl~eN~~ravnIa~~ 242 (444)
T 3vtf_A 167 KFSVAS---NPEFLREGSALEDFFKPDRIVIG-AGDERAASFLLDVYKAVDAPKLVMKPREAELVKYASNVFLALKISFA 242 (444)
T ss_dssp CCEEEE---CCCCCCTTSHHHHHHSCSCEEEE-ESSHHHHHHHHHHTTTSCSCEEEECHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Cceeec---CcccccCCccccccccCCcEEEc-CCCHHHHHHHHHHHhccCCCEEEechhHHHHHHHHHHHHHHHHHHHH
Confidence 112221 33333222 012323 24678888999999988776655532 222444533 25889
Q ss_pred HHHHHHHHc-CCCHHHHHHHH-H--hcCC
Q 004918 503 QSARLLVSL-GVDVFRIDSAI-R--SFGL 527 (724)
Q Consensus 503 ~Ea~~l~~~-Gv~~~~ID~a~-~--~~g~ 527 (724)
||...+.+. |+++.+|-+++ . .+|+
T Consensus 243 NEla~ice~~GiDv~eV~~a~~~d~rig~ 271 (444)
T 3vtf_A 243 NEVGLLAKRLGVDTYRVFEAVGLDKRIGR 271 (444)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHTSTTSCS
T ss_pred HHHHHHHHHcCCCHHHHHHHhccCCCCCC
Confidence 998877766 99999988887 3 4553
No 164
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=99.19 E-value=1.4e-11 Score=122.92 Aligned_cols=149 Identities=13% Similarity=0.126 Sum_probs=100.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
.++||+|||+|.||..++..|++.|++|+++|++++.++... +.| +..++..+.++
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~-----------~~g-------------~~~~~~~~~~~ 82 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRLVGSGFKVVVGSRNPKRTARLF-----------PSA-------------AQVTFQEEAVS 82 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHS-----------BTT-------------SEEEEHHHHTT
T ss_pred CCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----------HcC-------------CceecHHHHHh
Confidence 456899999999999999999999999999999998765431 111 22222225578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh----------cccCCCCCEEEEecCCCCC-----
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG----------EKTSSQDRIIGAHFFSPAH----- 451 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~----------~~~~~~~r~ig~h~~~p~~----- 451 (724)
++|+||.|+|. .....+++ +.+.. ++++|++.+++.+.+.+. ..+. ..+++.. + ++..
T Consensus 83 ~~DvVi~av~~--~~~~~v~~-l~~~~-~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~-~~~vv~~-~-n~~~~~~~~ 155 (215)
T 2vns_A 83 SPEVIFVAVFR--EHYSSLCS-LSDQL-AGKILVDVSNPTEQEHLQHRESNAEYLASLFP-TCTVVKA-F-NVISAWTLQ 155 (215)
T ss_dssp SCSEEEECSCG--GGSGGGGG-GHHHH-TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCT-TSEEEEE-C-TTBCHHHHH
T ss_pred CCCEEEECCCh--HHHHHHHH-HHHhc-CCCEEEEeCCCcccccccccccHHHHHHHHCC-CCeEEec-c-ccccHhHhc
Confidence 99999999994 33445554 55555 788898888888765542 2232 2345442 1 2211
Q ss_pred ----CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 452 ----VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 452 ----~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
.++...++.+ .+++.++.++++++.+|+.++++++
T Consensus 156 ~~~~~g~~~~~~~g--~~~~~~~~v~~ll~~~G~~~~~~g~ 194 (215)
T 2vns_A 156 AGPRDGNRQVPICG--DQPEAKRAVSEMALAMGFMPVDMGS 194 (215)
T ss_dssp TCSCSSCCEEEEEE--SCHHHHHHHHHHHHHTTCEEEECCS
T ss_pred ccccCCceeEEEec--CCHHHHHHHHHHHHHcCCceEeecc
Confidence 1111122332 2799999999999999999999876
No 165
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=99.19 E-value=3.3e-11 Score=130.32 Aligned_cols=168 Identities=13% Similarity=0.067 Sum_probs=105.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
|+||+|||+|.||.++|..|+++|++|++||+++++++...+... ....+.. ......+..+++. ++++
T Consensus 15 M~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~-------~~~~~~~---~~~~~~~~~~~~~~~~~~ 84 (366)
T 1evy_A 15 LNKAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRE-------NVLFLKG---VQLASNITFTSDVEKAYN 84 (366)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTB-------CTTTSTT---CBCCTTEEEESCHHHHHT
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCc-------ccccccc---cccccceeeeCCHHHHHc
Confidence 459999999999999999999999999999999988776533100 0000000 0001234555565 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHH----HHhhCCC-CcEEEecCCCCCHHH---HhcccCC--CC-CEEEEecCCCCCC---
Q 004918 387 DVDMVIEAVIESVPLKQKIFSE----LEKACPP-HCILATNTSTIDLNI---VGEKTSS--QD-RIIGAHFFSPAHV--- 452 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~----l~~~~~~-~~ii~s~ts~~~~~~---~~~~~~~--~~-r~ig~h~~~p~~~--- 452 (724)
+||+||+||| .....+++.+ +.+.+++ +++|++.++++.+.. +...+.. +. .+. ....|...
T Consensus 85 ~aDvVilav~--~~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~~~~--v~~gp~~~~~~ 160 (366)
T 1evy_A 85 GAEIILFVIP--TQFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSPLLS--VLAGPSFAIEV 160 (366)
T ss_dssp TCSSEEECCC--HHHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGGGEE--EEESSCCHHHH
T ss_pred CCCEEEECCC--hHHHHHHHHHhHHHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCCcEE--EEeCCChHHHH
Confidence 9999999999 5777888888 8888888 888887776665431 1111111 11 111 01122211
Q ss_pred --CCeeeEecCCCCCHHHHHHHHHHHHHc--CCeeEEEcCCC
Q 004918 453 --MPLLEIVRTERTSAQVILDLMTVGKII--KKVPVVVGNCT 490 (724)
Q Consensus 453 --~~lveii~~~~t~~e~~~~~~~l~~~l--Gk~~v~v~d~p 490 (724)
+....++.+ ..+++..+.+.+++... |..+++..+..
T Consensus 161 ~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~g~~~~~~~di~ 201 (366)
T 1evy_A 161 ATGVFTCVSIA-SADINVARRLQRIMSTGDRSFVCWATTDTV 201 (366)
T ss_dssp HTTCCEEEEEE-CSSHHHHHHHHHHHSCTTSSEEEEEESCHH
T ss_pred HhCCceEEEEe-cCCHHHHHHHHHHhcCCCCeEEEEEcCCch
Confidence 111112222 23678899999999999 77766666643
No 166
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=99.17 E-value=2.7e-11 Score=128.03 Aligned_cols=123 Identities=20% Similarity=0.302 Sum_probs=90.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+.+... ....++..++++++++
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~------------~~~~~i~~t~d~~al~ 71 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMA------------YSNCKVSGSNTYDDLA 71 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHH------------TCCCCEEEECCGGGGT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhc------------CCCcEEEECCCHHHhC
Confidence 4699999999999999999999999 99999999998876544444332211 1124577778889999
Q ss_pred CCCEEEEcc--cCCh-----------------HHHHHHHHHHHhhCCCCcEE--EecCCCCCHHHHhcccC--CCCCEEE
Q 004918 387 DVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRIIG 443 (724)
Q Consensus 387 ~aDlVIeav--~e~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~--~~~r~ig 443 (724)
+||+||+++ |++. .+++++++++.+++ +++++ +||++... +.+..... +|.|++|
T Consensus 72 ~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~~~-t~~~~~~~g~~~~rviG 149 (322)
T 1t2d_A 72 GADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVDVM-VQLLHQHSGVPKNKIIG 149 (322)
T ss_dssp TCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHHHH-HHHHHHHHCCCGGGEEE
T ss_pred CCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChHHH-HHHHHHhcCCChHHEEe
Confidence 999999998 6532 47899999999998 56654 46655543 34443333 5677777
Q ss_pred E
Q 004918 444 A 444 (724)
Q Consensus 444 ~ 444 (724)
+
T Consensus 150 ~ 150 (322)
T 1t2d_A 150 L 150 (322)
T ss_dssp C
T ss_pred c
Confidence 5
No 167
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=99.14 E-value=6.7e-11 Score=137.38 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=88.0
Q ss_pred hhhhhhhhHHHHHHHHHHHcCC--CHHHHHHHH-HhcCCCc---cHHHHHHhhchHHHHHHHHHHHHhCCC--CCCCcHH
Q 004918 492 FAVNRAFFPYSQSARLLVSLGV--DVFRIDSAI-RSFGLPI---GPFQLLDLAGYGVAAATSKEFDKAFPD--RSFQSPL 563 (724)
Q Consensus 492 ~i~nRl~~~~~~Ea~~l~~~Gv--~~~~ID~a~-~~~g~~~---Gp~~~~D~~Gld~~~~~~~~l~~~~~~--~~~~~~~ 563 (724)
-+..|++.+++||+.+++++|+ ++.|||.++ .|+|||. |||+++|.+|++.+...++.+...+++ ++.|+++
T Consensus 637 ei~~R~l~~~~nEa~~~l~egI~~~~~diD~a~~~G~Gfp~~~GGp~~~~D~~G~~~~v~~l~~l~~~~g~~~~~~P~~~ 716 (742)
T 3zwc_A 637 EILERCLYSLINEAFRILEEGMAARPEHIDVIYLHGYGWPRHKGGPMFYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDY 716 (742)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHSCCCGGGCCHHHHHHHHCHHHHHHHHHHHHHHCTTCGGGSCCHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCcCCCHHHHHHHHHhCcCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCHH
Confidence 4788999999999999999997 899999999 9999998 999999999999999999999999997 3449999
Q ss_pred HHHHHHcCCCCcccCccceeccC
Q 004918 564 VDLLLKSGRNGKANGKGLYTYEK 586 (724)
Q Consensus 564 l~~~v~~g~~G~k~g~Gfy~y~~ 586 (724)
|++|+++|....+.++|||.+.+
T Consensus 717 L~~ma~~G~~~f~~~~~~~~~~~ 739 (742)
T 3zwc_A 717 LRRLVAQGSPPLKEWQSLAGPHG 739 (742)
T ss_dssp HHHHHHTTCCCGGGHHHHHSTTC
T ss_pred HHHHHHcCCCcccccccccCCCC
Confidence 99999999998889999998764
No 168
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=99.14 E-value=3.9e-11 Score=127.35 Aligned_cols=123 Identities=21% Similarity=0.263 Sum_probs=90.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc-Cc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 385 (724)
.+||+|||+|.||.++|..|+..|+ +|++||++++.++.....+.+.+... + ...++..+++++ ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~---~---------~~~~i~~t~d~~ea~ 76 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV---D---------TNVSVRAEYSYEAAL 76 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT---T---------CCCCEEEECSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc---C---------CCCEEEEeCCHHHHh
Confidence 3589999999999999999999998 99999999998887544444433211 1 124677778885 89
Q ss_pred CCCCEEEEcc--cCCh-----------------HHHHHHHHHHHhhCCCCcEE--EecCCCCCHHHHhcccC--CCCCEE
Q 004918 386 KDVDMVIEAV--IESV-----------------PLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS--SQDRII 442 (724)
Q Consensus 386 ~~aDlVIeav--~e~~-----------------~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~--~~~r~i 442 (724)
++||+||+++ |++. .+++++++++.+++ |++++ +||++... +.+..... +|.|++
T Consensus 77 ~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~~~-t~~~~~~~~~~~~rvi 154 (331)
T 1pzg_A 77 TGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLDCM-VKVMCEASGVPTNMIC 154 (331)
T ss_dssp TTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHH-HHHHHHHHCCCGGGEE
T ss_pred CCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchHHH-HHHHHHhcCCChhcEE
Confidence 9999999999 7543 35889999999998 56665 46665543 34433332 567887
Q ss_pred EE
Q 004918 443 GA 444 (724)
Q Consensus 443 g~ 444 (724)
|+
T Consensus 155 G~ 156 (331)
T 1pzg_A 155 GM 156 (331)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 169
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=99.13 E-value=5.4e-11 Score=127.96 Aligned_cols=171 Identities=16% Similarity=0.045 Sum_probs=108.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCC-------CcEEEEeCCHH-----HHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALK 374 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G-------~~V~l~d~~~~-----~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~ 374 (724)
.++||+|||+|.||+++|..|+++| ++|++||++++ ..+...+...+ ..+. .+. ....
T Consensus 7 ~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~--~~~~-~~~-------~~~~ 76 (354)
T 1x0v_A 7 ASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHEN--VKYL-PGH-------KLPP 76 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCC--TTTS-TTC-------CCCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcc--cccC-Ccc-------cCcc
Confidence 3468999999999999999999999 99999999988 65543211000 0000 000 0012
Q ss_pred CcccccCc-cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--------HH-HhcccCCCCCEEEE
Q 004918 375 MLKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NI-VGEKTSSQDRIIGA 444 (724)
Q Consensus 375 ~i~~~~~~-~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--------~~-~~~~~~~~~r~ig~ 444 (724)
++..+++. +++++||+||+||| .....++++++.+.++++++|++.++++.+ .+ +...+..+ ..+-.
T Consensus 77 ~~~~~~~~~~~~~~aD~Vilav~--~~~~~~v~~~i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~v~~ 153 (354)
T 1x0v_A 77 NVVAVPDVVQAAEDADILIFVVP--HQFIGKICDQLKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLGIP-MSVLM 153 (354)
T ss_dssp TEEEESSHHHHHTTCSEEEECCC--GGGHHHHHHHHTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHTCC-EEEEE
T ss_pred CeEEEcCHHHHHcCCCEEEEeCC--HHHHHHHHHHHHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcCCC-EEEEE
Confidence 35555666 45789999999999 467889999999999999999988877653 11 12222211 11111
Q ss_pred ecCCCCC--CCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc
Q 004918 445 HFFSPAH--VMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (724)
Q Consensus 445 h~~~p~~--~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG 491 (724)
.+..+.. .+....++.+ ..+++..+.+.+++...|..+.+..|..+
T Consensus 154 gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 201 (354)
T 1x0v_A 154 GANIASEVADEKFCETTIG-CKDPAQGQLLKELMQTPNFRITVVQEVDT 201 (354)
T ss_dssp CSCCHHHHHTTCCEEEEEE-CSSHHHHHHHHHHHCBTTEEEEEESCHHH
T ss_pred CCCcHHHHHhcCCceEEEE-ECCHHHHHHHHHHhCCCCEEEEEcCCchH
Confidence 1211111 1111112222 24688899999999999988877777544
No 170
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=99.12 E-value=5.2e-11 Score=124.17 Aligned_cols=168 Identities=10% Similarity=-0.052 Sum_probs=108.5
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCCC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDVD 389 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~aD 389 (724)
||+|||+|.||+.+|..|+++|++|++||++++.++.. ...+... ......+. .++.+.++++|
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l-----------~~~~~~~----~~~~~~~~-~~~~~~~~~~d 65 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-----------NLVETDG----SIFNESLT-ANDPDFLATSD 65 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-----------EEECTTS----CEEEEEEE-ESCHHHHHTCS
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCccceeeE-----------EEEcCCC----ceeeeeee-ecCccccCCCC
Confidence 79999999999999999999999999999998653321 1111000 00000111 23345678999
Q ss_pred EEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH-HHhcccCCCCCEE-EEecCCCCCCCC-e-------eeEe
Q 004918 390 MVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII-GAHFFSPAHVMP-L-------LEIV 459 (724)
Q Consensus 390 lVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~-~~~~~~~~~~r~i-g~h~~~p~~~~~-l-------veii 459 (724)
+||.|+|.. ...++++++.+.++++++|++.++++... .+.+.+. . ++ |.+++.....+| . +.+.
T Consensus 66 ~vi~~v~~~--~~~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~~~~--~-~~~g~~~~~~~~~~p~~~~~~~g~~~i~ 140 (291)
T 1ks9_A 66 LLLVTLKAW--QVSDAVKSLASTLPVTTPILLIHNGMGTIEELQNIQQ--P-LLMGTTTHAARRDGNVIIHVANGITHIG 140 (291)
T ss_dssp EEEECSCGG--GHHHHHHHHHTTSCTTSCEEEECSSSCTTGGGTTCCS--C-EEEEEECCEEEEETTEEEEEECCCEEEE
T ss_pred EEEEEecHH--hHHHHHHHHHhhCCCCCEEEEecCCCCcHHHHHHhcC--C-eEEEEEeEccEEcCCEEEEecccceEEc
Confidence 999999954 46788899999999999888877776553 3444332 2 44 444321111111 1 1122
Q ss_pred cCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhh
Q 004918 460 RTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFF 499 (724)
Q Consensus 460 ~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~ 499 (724)
... .+++.++.+.++++.+|..+++.++..+...+.+..
T Consensus 141 ~~~-~~~~~~~~~~~ll~~~g~~~~~~~~~~~~~~~Kl~~ 179 (291)
T 1ks9_A 141 PAR-QQDGDYSYLADILQTVLPDVAWHNNIRAELWRKLAV 179 (291)
T ss_dssp ESS-GGGTTCTHHHHHHHTTSSCEEECTTHHHHHHHHHHH
T ss_pred cCC-CCcchHHHHHHHHHhcCCCCeecHHHHHHHHHHHee
Confidence 212 245678889999999999888888766666665543
No 171
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=99.11 E-value=6.6e-10 Score=121.29 Aligned_cols=196 Identities=18% Similarity=0.187 Sum_probs=122.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHh----hcCcccccCc-cC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA----LKMLKGVLDY-SE 384 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~----~~~i~~~~~~-~~ 384 (724)
||+|||+|.||.++|..|++ |++|++||+++++++...+.. ..+........ ..++.++++. ++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~~~~~~l~~~~----------~~i~e~~l~~~~~~~~~~l~~t~~~~~~ 70 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILPSKVDKINNGL----------SPIQDEYIEYYLKSKQLSIKATLDSKAA 70 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCHHHHHHHHTTC----------CSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHcCC----------CCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence 79999999999999999999 999999999999877643210 01111111111 1245666776 56
Q ss_pred cCCCCEEEEcccCCh---------HHHHHHHHHHHhhCCCCcEEEe-cCCCCCH-HHHhcccCCCCCEEEEecCCCCCCC
Q 004918 385 FKDVDMVIEAVIESV---------PLKQKIFSELEKACPPHCILAT-NTSTIDL-NIVGEKTSSQDRIIGAHFFSPAHVM 453 (724)
Q Consensus 385 ~~~aDlVIeav~e~~---------~~k~~v~~~l~~~~~~~~ii~s-~ts~~~~-~~~~~~~~~~~r~ig~h~~~p~~~~ 453 (724)
+++||+||.|||... ....++++.+.+ ++++++|+. +|.+... ..+...+... .+... |....
T Consensus 71 ~~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~---Pe~~~ 144 (402)
T 1dlj_A 71 YKEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFS---PEFLR 144 (402)
T ss_dssp HHHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEEC---CCCCC
T ss_pred hcCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEEC---Ccccc
Confidence 889999999999753 156778888888 788888775 3433333 2444444322 22222 22221
Q ss_pred Ce------e---eEecCCCCC-----HHHHHHHHHHHHH-cCC-e-eEEEcCCC-----chhhhhh---hhHHHHHHHHH
Q 004918 454 PL------L---EIVRTERTS-----AQVILDLMTVGKI-IKK-V-PVVVGNCT-----GFAVNRA---FFPYSQSARLL 508 (724)
Q Consensus 454 ~l------v---eii~~~~t~-----~e~~~~~~~l~~~-lGk-~-~v~v~d~p-----G~i~nRl---~~~~~~Ea~~l 508 (724)
+. . .++-|.... .+..+.+.+++.. ..+ . ++++++.. .++.|-+ ..+++||+..+
T Consensus 145 ~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l 224 (402)
T 1dlj_A 145 ESKALYDNLYPSRIIVSCEENDSPKVKADAEKFALLLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTY 224 (402)
T ss_dssp TTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHHHHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhcccCCCEEEEeCCCcccchhHHHHHHHHHHHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1 133333221 1556777777765 332 2 56665522 2344543 24778999888
Q ss_pred HHc-CCCHHHHHHHH
Q 004918 509 VSL-GVDVFRIDSAI 522 (724)
Q Consensus 509 ~~~-Gv~~~~ID~a~ 522 (724)
.+. |+++.++-.++
T Consensus 225 ~~~~Gid~~~v~~~~ 239 (402)
T 1dlj_A 225 AESRKLNSHMIIQGI 239 (402)
T ss_dssp HHHTTCCHHHHHHHH
T ss_pred HHHhCCCHHHHHHHh
Confidence 876 99999998888
No 172
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=99.08 E-value=5.4e-10 Score=119.19 Aligned_cols=159 Identities=13% Similarity=0.042 Sum_probs=94.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
.||+|||+|.||+.+|..|+++|++|++|||++++++...+...+ .+. .+. . + .+..+++.++++++
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~~~~~~l~~~g~~---~~~-~~~-~-------~-~~~~~~~~~~~~~a 81 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTS---PYV-EES-K-------I-TVRATNDLEEIKKE 81 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHSCB---TTB-TTC-C-------C-CSEEESCGGGCCTT
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHhCCc---ccC-CCC-e-------e-eEEEeCCHHHhcCC
Confidence 589999999999999999999999999999999887664321000 000 000 0 0 34455666448899
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH---HhcccC--CCCC-EEEEecCCCCC--CCCeeeEec
Q 004918 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI---VGEKTS--SQDR-IIGAHFFSPAH--VMPLLEIVR 460 (724)
Q Consensus 389 DlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~---~~~~~~--~~~r-~ig~h~~~p~~--~~~lveii~ 460 (724)
|+||.||| .....+++.++.+ ++++|++.+.++...+ +++.+. .+.. .+-.-+..+.. .+....++.
T Consensus 82 DvVil~vk--~~~~~~v~~~l~~---~~~~vv~~~nGi~~~~~~~l~~~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~ 156 (335)
T 1z82_A 82 DILVIAIP--VQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTL 156 (335)
T ss_dssp EEEEECSC--GGGHHHHHTTCSS---CCSEEEECCCCCCTTTCCCHHHHHHHHTCCCEEEEESSCCHHHHHTTCCEEEEE
T ss_pred CEEEEECC--HHHHHHHHHHhCc---CCCEEEEEeCCCCCCccCcHHHHHHHHcCCceEEEECCccHHHHhCCCceEEEE
Confidence 99999999 4566667666544 6777777665544321 111111 0111 11111211110 121112222
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004918 461 TERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (724)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 489 (724)
+.. + .+.+.+++...|..+.+..|.
T Consensus 157 g~~-~---~~~~~~ll~~~g~~~~~~~di 181 (335)
T 1z82_A 157 AGE-N---SKELQKRISTEYFRVYTCEDV 181 (335)
T ss_dssp EET-T---HHHHHHHHCCSSEEEEEESCH
T ss_pred Eeh-h---HHHHHHHhCCCCEEEEecCch
Confidence 221 2 678899999999887776664
No 173
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=99.07 E-value=1.1e-10 Score=123.43 Aligned_cols=158 Identities=18% Similarity=0.204 Sum_probs=105.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.||.++|..|+..|+ +|+++|+++++++.....+.+.+. .. . ..++.. ++.++++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~-~~--~----------~~~i~~-~d~~~~~ 66 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTP-FT--R----------RANIYA-GDYADLK 66 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG-GS--C----------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhh-hc--C----------CcEEEe-CCHHHhC
Confidence 389999999999999999999999 999999999887765433332221 00 0 123333 3577899
Q ss_pred CCCEEEEcccCC--------------hHHHHHHHHHHHhhCCCCcEEE--ecCCCCCHHHHhccc-C-CCCCEEEEecCC
Q 004918 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKT-S-SQDRIIGAHFFS 448 (724)
Q Consensus 387 ~aDlVIeav~e~--------------~~~k~~v~~~l~~~~~~~~ii~--s~ts~~~~~~~~~~~-~-~~~r~ig~h~~~ 448 (724)
+||+||++++.. ..+++++++++.+++ ++++++ ||++... +.+.... . .+.|++|+
T Consensus 67 ~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~~~-~~~~~~~~~~~~~rviG~---- 140 (319)
T 1a5z_A 67 GSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVDVL-TYFFLKESGMDPRKVFGS---- 140 (319)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHHHH-HHHHHHHHTCCTTTEEEC----
T ss_pred CCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHHHH-HHHHHHHhCCChhhEEee----
Confidence 999999999852 246788999999987 455443 4444332 3333222 2 56677776
Q ss_pred CCCCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhh---hhhhHHHH
Q 004918 449 PAHVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVN---RAFFPYSQ 503 (724)
Q Consensus 449 p~~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~n---Rl~~~~~~ 503 (724)
.|.-++......+.+.+|..+ ++.++++.+ ..++++++
T Consensus 141 --------------~t~ld~~r~~~~la~~lgv~~---~~v~~~v~G~hg~~~~p~~s 181 (319)
T 1a5z_A 141 --------------GTVLDTARLRTLIAQHCGFSP---RSVHVYVIGEHGDSEVPVWS 181 (319)
T ss_dssp --------------TTHHHHHHHHHHHHHHHTCCG---GGEECCEEBCSSTTCEECGG
T ss_pred --------------CccHHHHHHHHHHHHHhCcCH---HHceEEEEeCCCCCcccchh
Confidence 355666777777778888554 455566665 44444444
No 174
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=99.06 E-value=2.1e-10 Score=124.32 Aligned_cols=170 Identities=11% Similarity=-0.033 Sum_probs=108.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-------CcEEEEeCCHH-----HHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN-------IYVVLKEVNSE-----YLLKGIKTIEANVRGLVTRGKLTQDKANNALKM 375 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G-------~~V~l~d~~~~-----~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~ 375 (724)
|+||+|||+|.||+++|..|+++| ++|++||++++ .++...+.. .....+.. .....+
T Consensus 21 ~~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~-------~~~~~~~~---~~~~~~ 90 (375)
T 1yj8_A 21 PLKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKH-------ENTKYLKG---VPLPHN 90 (375)
T ss_dssp CBCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHC-------BCTTTSTT---CBCCTT
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcC-------cccccCCc---ccCcCC
Confidence 468999999999999999999999 99999999987 554432210 00000000 001124
Q ss_pred cccccCc-cCcCCCCEEEEcccCChHHHHHHHHHHHh----hCCCCcEEEecCCCCCH--------HHH-hcccCCCCCE
Q 004918 376 LKGVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEK----ACPPHCILATNTSTIDL--------NIV-GEKTSSQDRI 441 (724)
Q Consensus 376 i~~~~~~-~~~~~aDlVIeav~e~~~~k~~v~~~l~~----~~~~~~ii~s~ts~~~~--------~~~-~~~~~~~~r~ 441 (724)
+..+++. +++++||+||+||| .....+++.++.+ .++++++|++.++++.+ ++. ......+ ..
T Consensus 91 i~~~~~~~ea~~~aDvVilav~--~~~~~~vl~~i~~~~~~~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~~~-~~ 167 (375)
T 1yj8_A 91 IVAHSDLASVINDADLLIFIVP--CQYLESVLASIKESESIKIASHAKAISLTKGFIVKKNQMKLCSNYISDFLNIP-CS 167 (375)
T ss_dssp EEEESSTHHHHTTCSEEEECCC--HHHHHHHHHHHTC---CCCCTTCEEEECCCSCEEETTEEECHHHHHHHHSSSC-EE
T ss_pred eEEECCHHHHHcCCCEEEEcCC--HHHHHHHHHHHhhhhhccCCCCCEEEEeCCccccCCccccCHHHHHHHHcCCC-EE
Confidence 5556666 55789999999999 6788899999988 88899999988877654 111 1222111 11
Q ss_pred EEEecCCCC--CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCc
Q 004918 442 IGAHFFSPA--HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTG 491 (724)
Q Consensus 442 ig~h~~~p~--~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG 491 (724)
+-..+..+. ..+....++.+ ..+++..+.+++++...|..+.+..|..|
T Consensus 168 v~~gp~~a~~v~~g~~~~~~~~-~~~~~~~~~v~~ll~~~g~~~~~~~di~~ 218 (375)
T 1yj8_A 168 ALSGANIAMDVAMENFSEATIG-GNDKDSLVIWQRVFDLPYFKINCVNETIE 218 (375)
T ss_dssp EEECSCCHHHHHTTCCEEEEEE-CSCHHHHHHHHHHHCBTTEEEEEESCSHH
T ss_pred EEeCCchHHHHHhCCCeEEEEe-cCCHHHHHHHHHHhCCCCeEEEEeCCcHH
Confidence 111111110 01111122222 23678899999999999988888787654
No 175
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=99.06 E-value=2.5e-10 Score=123.47 Aligned_cols=155 Identities=10% Similarity=0.021 Sum_probs=109.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC------CCcEEEEeCCHH-HHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN------NIYVVLKEVNSE-YLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~------G~~V~l~d~~~~-~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
++||+|||+|.||.++|..|.++ |++|++.+++.+ ..+.+ .+.|.... .-...+
T Consensus 54 iKkIgIIGlGsMG~AmA~nLr~s~~~~g~G~~ViVg~r~~sks~e~A-----------~e~G~~v~--------d~ta~s 114 (525)
T 3fr7_A 54 IKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEA-----------RAAGFTEE--------SGTLGD 114 (525)
T ss_dssp CSEEEEECCTTHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSCHHHH-----------HHTTCCTT--------TTCEEE
T ss_pred CCEEEEEeEhHHHHHHHHHHHhcccccCCCCEEEEEeCCchhhHHHH-----------HHCCCEEe--------cCCCCC
Confidence 47999999999999999999999 999988776543 22222 12221100 000112
Q ss_pred CccCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhc---ccCCCCCEEEEecCCCCCC-----
Q 004918 381 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGE---KTSSQDRIIGAHFFSPAHV----- 452 (724)
Q Consensus 381 ~~~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~---~~~~~~r~ig~h~~~p~~~----- 452 (724)
..+++++||+||.++| .....+++.++.+.++++++| +...++.+..+.. .......++.+||..|.+.
T Consensus 115 ~aEAa~~ADVVILaVP--~~~~~eVl~eI~p~LK~GaIL-s~AaGf~I~~le~~~i~~p~dv~VVrVmPNtPg~~VR~~y 191 (525)
T 3fr7_A 115 IWETVSGSDLVLLLIS--DAAQADNYEKIFSHMKPNSIL-GLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLY 191 (525)
T ss_dssp HHHHHHHCSEEEECSC--HHHHHHHHHHHHHHSCTTCEE-EESSSHHHHHHHHTTCCCCTTSEEEEEEESSCHHHHHHHH
T ss_pred HHHHHhcCCEEEECCC--hHHHHHHHHHHHHhcCCCCeE-EEeCCCCHHHHhhhcccCCCCCcEEEEecCCCchhHHHHH
Confidence 2267889999999999 454557889999999999985 7788888877664 3333457999999988875
Q ss_pred --C-----Ceee--EecCCCCCHHHHHHHHHHHHHcCCeeE
Q 004918 453 --M-----PLLE--IVRTERTSAQVILDLMTVGKIIKKVPV 484 (724)
Q Consensus 453 --~-----~lve--ii~~~~t~~e~~~~~~~l~~~lGk~~v 484 (724)
+ ..+. +..+...+.+..+.+..++..+|...+
T Consensus 192 ~~G~~~~g~Gv~~liAv~qd~tgea~e~alala~aiG~~~v 232 (525)
T 3fr7_A 192 VQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT 232 (525)
T ss_dssp HHHTTSTTCSCCEEEEEEECSSSCHHHHHHHHHHHTTCSEE
T ss_pred hcccccccCCccEEEEcCCCCCHHHHHHHHHHHHHCCCCee
Confidence 1 1222 233445677889999999999998754
No 176
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=99.05 E-value=3.9e-10 Score=119.15 Aligned_cols=169 Identities=11% Similarity=-0.013 Sum_probs=104.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-----C-CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHH-HHHHhhcCccccc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-----N-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQD-KANNALKMLKGVL 380 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-----G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~-~~~~~~~~i~~~~ 380 (724)
.+||+|||+|.||+.+|..|+++ | ++|++|+| +++++...+. .|..... .-......+..++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r-~~~~~~l~~~----------~g~~~~~~~~~~~~~~~~~~~ 76 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR-GAHLEAIRAA----------GGLRVVTPSRDFLARPTCVTD 76 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC-HHHHHHHHHH----------TSEEEECSSCEEEECCSEEES
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc-HHHHHHHHhc----------CCeEEEeCCCCeEEecceEec
Confidence 35899999999999999999999 9 99999999 7665553220 1100000 0000001123334
Q ss_pred CccCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH-HHhcccCCCCCEEEEecCCCCCC-------
Q 004918 381 DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAHFFSPAHV------- 452 (724)
Q Consensus 381 ~~~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~-~~~~~~~~~~r~ig~h~~~p~~~------- 452 (724)
+.+.+.++|+||.||+... ..++++++.+.++++++|++.+.++... .+.+.+....-+.|+.+...+..
T Consensus 77 ~~~~~~~~D~vil~vk~~~--~~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~ 154 (317)
T 2qyt_A 77 NPAEVGTVDYILFCTKDYD--MERGVAEIRPMIGQNTKILPLLNGADIAERMRTYLPDTVVWKGCVYISARKSAPGLITL 154 (317)
T ss_dssp CHHHHCCEEEEEECCSSSC--HHHHHHHHGGGEEEEEEEEECSCSSSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEE
T ss_pred CccccCCCCEEEEecCccc--HHHHHHHHHhhcCCCCEEEEccCCCCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEE
Confidence 5556789999999998543 4788889988888888888877777763 45555543221223332211111
Q ss_pred -CCeeeE-ecC--CCCCHHHHHHHHHHHHHcCCeeEEEcCCC
Q 004918 453 -MPLLEI-VRT--ERTSAQVILDLMTVGKIIKKVPVVVGNCT 490 (724)
Q Consensus 453 -~~lvei-i~~--~~t~~e~~~~~~~l~~~lGk~~v~v~d~p 490 (724)
.....+ +.. ...+++.+ .+.+++...|..+.+.++.-
T Consensus 155 ~~~g~~~~ig~~~~~~~~~~~-~~~~ll~~~g~~~~~~~di~ 195 (317)
T 2qyt_A 155 EADRELFYFGSGLPEQTDDEV-RLAELLTAAGIRAYNPTDID 195 (317)
T ss_dssp EEEEEEEEEECCSSSCCHHHH-HHHHHHHHTTCCEECCSCHH
T ss_pred cCCCceEEEcCCCCCCcCHHH-HHHHHHHHCCCCCEEchHHH
Confidence 111112 322 33457777 89999999998877666643
No 177
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=99.03 E-value=1.4e-09 Score=115.13 Aligned_cols=174 Identities=14% Similarity=0.079 Sum_probs=115.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
.++||+|||+|.||+.+|..|+++|++|++| ++++.++...+.- + ....... .....+..+++.+.++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~~~~~~i~~~g---~--~~~~~~~------~~~~~~~~~~~~~~~~ 85 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARPQHVQAIEATG---L--RLETQSF------DEQVKVSASSDPSAVQ 85 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCHHHHHHHHHHC---E--EEECSSC------EEEECCEEESCGGGGT
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcHhHHHHHHhCC---e--EEEcCCC------cEEEeeeeeCCHHHcC
Confidence 3579999999999999999999999999999 9988877654310 0 0000000 0112455566777788
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH-HHhcccCCCCCEEEEe------cCCCCCC---CCee
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRIIGAH------FFSPAHV---MPLL 456 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~-~~~~~~~~~~r~ig~h------~~~p~~~---~~lv 456 (724)
++|+||.||| ....+++++++.+.++++++|++.++++... .+.+.++ .++++.. ...|-.. ...
T Consensus 86 ~~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~--~~vl~g~~~~~a~~~gP~~~~~~~~g- 160 (318)
T 3hwr_A 86 GADLVLFCVK--STDTQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE--QEVAAAVVYVATEMAGPGHVRHHGRG- 160 (318)
T ss_dssp TCSEEEECCC--GGGHHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC--SEEEEEEEEEEEEEEETTEEEEEEEE-
T ss_pred CCCEEEEEcc--cccHHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC--CcEEEEEEEEeEEEcCCeEEEEcCCc-
Confidence 9999999999 4466889999999999999999999999884 4555554 4454321 1112111 111
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhH
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~ 500 (724)
.+.-+. .+..+.+.+++...|..+.+..|.-+.....++..
T Consensus 161 ~~~ig~---~~~~~~l~~~l~~~~~~~~~~~Di~~~~w~Kl~~N 201 (318)
T 3hwr_A 161 ELVIEP---TSHGANLAAIFAAAGVPVETSDNVRGALWAKLILN 201 (318)
T ss_dssp EEEECC---CTTTHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred eEEEcC---CHHHHHHHHHHHhCCCCcEechHHHHHHHHHHHHH
Confidence 111122 23456788888888888777778777666655443
No 178
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=99.03 E-value=1.6e-10 Score=120.79 Aligned_cols=122 Identities=22% Similarity=0.292 Sum_probs=83.0
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC
Q 004918 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (724)
Q Consensus 304 ~~~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (724)
..++++||+|||+|.||.++|..++..|+ +|+++|++++....+.+ +.. . ...++..+++
T Consensus 10 ~~~~~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~d-l~~-----~------------~~~~i~~t~d 71 (303)
T 2i6t_A 10 ENKTVNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEGTKGATMD-LEI-----F------------NLPNVEISKD 71 (303)
T ss_dssp ----CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-----CHHH-HHH-----H------------TCTTEEEESC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHH-Hhh-----h------------cCCCeEEeCC
Confidence 34567899999999999999999999999 99999999863222221 111 0 0125666778
Q ss_pred ccCcCCCCEEEEcc-------------cCChHHHHHHHHHHHhhCCCCcEE--EecCCCCCHHHHhcccC-CCCCEEEE
Q 004918 382 YSEFKDVDMVIEAV-------------IESVPLKQKIFSELEKACPPHCIL--ATNTSTIDLNIVGEKTS-SQDRIIGA 444 (724)
Q Consensus 382 ~~~~~~aDlVIeav-------------~e~~~~k~~v~~~l~~~~~~~~ii--~s~ts~~~~~~~~~~~~-~~~r~ig~ 444 (724)
++++++||+||+++ .++..+++++++++.+++ ++++| +||++......+..... .+.|++|+
T Consensus 72 ~~~l~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~sNP~~~~t~~~~~~~~~p~~rviG~ 149 (303)
T 2i6t_A 72 LSASAHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVASQPVEIMTYVTWKLSTFPANRVIGI 149 (303)
T ss_dssp GGGGTTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred HHHHCCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcCChHHHHHHHHHHhcCCCHHHeeCC
Confidence 89999999999997 889999999999999998 56655 46644322222222222 35677776
No 179
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=99.02 E-value=4.5e-10 Score=119.65 Aligned_cols=162 Identities=14% Similarity=0.056 Sum_probs=103.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeC--CHHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHhhcCccccc--Cc-c
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEV--NSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVL--DY-S 383 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~--~~-~ 383 (724)
||+|||+|.||+.+|..|+++|++|++||+ +++.++...+ .+. +... . . ...+..++ +. +
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-----------~~~~~~~g-~-~-~~~~~~~~~~~~~~ 67 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISA-----------GREHPRLG-V-K-LNGVEIFWPEQLEK 67 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHT-----------TCCBTTTT-B-C-CCSEEEECGGGHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHH-----------hCcCcccC-c-c-ccceEEecHHhHHH
Confidence 799999999999999999999999999999 8887665422 111 0000 0 0 01233344 44 4
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC---C---HHHHhcccCC--CCCEEEEecCCCCCC---
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI---D---LNIVGEKTSS--QDRIIGAHFFSPAHV--- 452 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~---~---~~~~~~~~~~--~~r~ig~h~~~p~~~--- 452 (724)
.++++|+||.||| .....+++.++.+ ++++++|++.+.++ + ...+.+.+.. +..........|...
T Consensus 68 ~~~~~D~vi~~v~--~~~~~~v~~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~p~~~~~~ 144 (335)
T 1txg_A 68 CLENAEVVLLGVS--TDGVLPVMSRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRERTVAITGPAIAREV 144 (335)
T ss_dssp HHTTCSEEEECSC--GGGHHHHHHHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGGGEEEEESSCCHHHH
T ss_pred HHhcCCEEEEcCC--hHHHHHHHHHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCCcEEEEECCCcHHHH
Confidence 5789999999999 4467788899988 88899888776565 2 2344443332 110001111223221
Q ss_pred --CCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCC
Q 004918 453 --MPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNC 489 (724)
Q Consensus 453 --~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~ 489 (724)
+....++.+. .+++..+.+.++++..|..+.+..|.
T Consensus 145 ~~g~~~~~~~~~-~~~~~~~~~~~ll~~~g~~~~~~~di 182 (335)
T 1txg_A 145 AKRMPTTVVFSS-PSESSANKMKEIFETEYFGVEVTTDI 182 (335)
T ss_dssp HTTCCEEEEEEC-SCHHHHHHHHHHHCBTTEEEEEESCH
T ss_pred HccCCcEEEEEe-CCHHHHHHHHHHhCCCcEEEEecCch
Confidence 1111233332 36888999999999999887777764
No 180
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.95 E-value=5.9e-10 Score=117.20 Aligned_cols=99 Identities=14% Similarity=0.243 Sum_probs=74.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ......++..+++++++++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~------------~~~~~~~i~~t~d~~a~~~ 70 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP------------IEGFDVRVTGTNNYADTAN 70 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHH------------HHTCCCCEEEESCGGGGTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHh------------hcCCCeEEEECCCHHHHCC
Confidence 589999999999999999999997 999999999877643222211110 0111235666778899999
Q ss_pred CCEEEEcc--------------cCChHHHHHHHHHHHhhCCCCcEEE
Q 004918 388 VDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 388 aDlVIeav--------------~e~~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
||+||+++ .++..+++++++++.+++ ++++++
T Consensus 71 aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi 116 (309)
T 1ur5_A 71 SDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVII 116 (309)
T ss_dssp CSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEE
T ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEE
Confidence 99999997 344578889999999987 666553
No 181
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.47 E-value=9.6e-11 Score=115.31 Aligned_cols=148 Identities=14% Similarity=0.163 Sum_probs=97.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
+||+|||+|.||..+|..|.+.|++|++|||+++ .+... ..+ +...+..+.++++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~-~~~~~-----------~~g-------------~~~~~~~~~~~~a 74 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ-VSSLL-----------PRG-------------AEVLCYSEAASRS 74 (201)
Confidence 5799999999999999999999999999999876 32211 111 1122223567899
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--------HHHhcccCCCCCEEEEecCCCCCCCC-ee---
Q 004918 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--------NIVGEKTSSQDRIIGAHFFSPAHVMP-LL--- 456 (724)
Q Consensus 389 DlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--------~~~~~~~~~~~r~ig~h~~~p~~~~~-lv--- 456 (724)
|+||.|+|.. ....++ ++.. ..++++|++.+++.+. ..+.+.+.. .+++...++.|..... ..
T Consensus 75 DvVilav~~~--~~~~v~-~l~~-~~~~~ivI~~~~G~~~~~~~~~~~~~l~~~~~~-~~vvra~~n~~a~~~~~g~l~g 149 (201)
T 2yjz_A 75 DVIVLAVHRE--HYDFLA-ELAD-SLKGRVLIDVSNNQKMNQYPESNAEYLAQLVPG-AHVVKAFNTISAWALQSGTLDA 149 (201)
Confidence 9999999943 344555 4544 3467788777777653 333333322 3444444444433322 11
Q ss_pred ---eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcC
Q 004918 457 ---EIVRTERTSAQVILDLMTVGKIIKKVPVVVGN 488 (724)
Q Consensus 457 ---eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d 488 (724)
.++.+. +++..+.+.++++.+|+.++.+++
T Consensus 150 ~~~~~~~g~--~~~~~~~v~~ll~~~G~~~~~~G~ 182 (201)
T 2yjz_A 150 SRQVFVCGN--DSKAKDRVMDIARTLGLTPLDQGS 182 (201)
Confidence 233443 578899999999999999998876
No 182
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=98.92 E-value=4.2e-09 Score=112.26 Aligned_cols=170 Identities=12% Similarity=0.140 Sum_probs=106.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
++||+|||+|.||+.+|..|+++|++|++|+|+ +..+... +.|......-......+..+++.+++++
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~-~~~~~~~-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLALAGEAINVLARG-ATLQALQ-----------TAGLRLTEDGATHTLPVRATHDAAALGE 70 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH-HHHHHHH-----------HTCEEEEETTEEEEECCEEESCHHHHCC
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh-HHHHHHH-----------HCCCEEecCCCeEEEeeeEECCHHHcCC
Confidence 468999999999999999999999999999996 4444322 1111000000001123444566666789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC-------------------HH-HHhcccCCCCCEEE-Eec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID-------------------LN-IVGEKTSSQDRIIG-AHF 446 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~-------------------~~-~~~~~~~~~~r~ig-~h~ 446 (724)
+|+||.||| .....++++++.+.++++++|++.+.+++ .. .+.+.++ ..++++ +-+
T Consensus 71 ~D~Vilavk--~~~~~~~~~~l~~~l~~~~~iv~~~nGi~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~-~~~v~~gv~~ 147 (335)
T 3ghy_A 71 QDVVIVAVK--APALESVAAGIAPLIGPGTCVVVAMNGVPWWFFDRPGPLQGQRLQAVDPHGRIAQAIP-TRHVLGCVVH 147 (335)
T ss_dssp CSEEEECCC--HHHHHHHHGGGSSSCCTTCEEEECCSSSCTTTTCSSSTTTTCCCTTTCTTSHHHHHSC-GGGEEEEEEC
T ss_pred CCEEEEeCC--chhHHHHHHHHHhhCCCCCEEEEECCCCccccccccccccccccccCCcHHHHHHhcC-cccEEEEEEE
Confidence 999999999 56667888899999999999988777753 11 2333332 234443 222
Q ss_pred C-----CCCCC---CCe-eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCch
Q 004918 447 F-----SPAHV---MPL-LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGF 492 (724)
Q Consensus 447 ~-----~p~~~---~~l-veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~ 492 (724)
+ .|-.. ... +.+-.....+.+..+.+.+++...|....+..|.-+.
T Consensus 148 ~~a~~~~pg~v~~~~~g~~~iG~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~ 202 (335)
T 3ghy_A 148 LTCATVSPGHIRHGNGRRLILGEPAGGASPRLASIAALFGRAGLQAECSEAIQRD 202 (335)
T ss_dssp CCEEESSTTEEEECSCCEEEEECTTCSCCHHHHHHHHHHHHTTCEEEECSCHHHH
T ss_pred EEEEEcCCcEEEECCCCeEEEecCCCCcCHHHHHHHHHHHhCCCCcEeCchHHHH
Confidence 1 11110 000 1111112234577788889999988887776776553
No 183
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=98.90 E-value=1.2e-08 Score=107.53 Aligned_cols=176 Identities=13% Similarity=0.060 Sum_probs=111.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+||+|||+|.||+.+|..|+++|++|++|+|++ .+... +.|.. ....-...+..+..+++.+.+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~--~~~i~-----------~~g~~~~~~~g~~~~~~~~~~~~~~~~~~ 69 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD--YEAIA-----------GNGLKVFSINGDFTLPHVKGYRAPEEIGP 69 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT--HHHHH-----------HTCEEEEETTCCEEESCCCEESCHHHHCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc--HHHHH-----------hCCCEEEcCCCeEEEeeceeecCHHHcCC
Confidence 589999999999999999999999999999986 23321 11110 00000000012344556666789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH-HHHhcccCCCCCEEEEe-c-----CCCC---CCCCe-e
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGAH-F-----FSPA---HVMPL-L 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~h-~-----~~p~---~~~~l-v 456 (724)
+|+||.||+ .....++++++.+.+.++++|++...++.. +.+.+.++. .++++.- + ..|- +..+. +
T Consensus 70 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~-~~v~~~~~~~~a~~~~p~~v~~~~~g~~ 146 (312)
T 3hn2_A 70 MDLVLVGLK--TFANSRYEELIRPLVEEGTQILTLQNGLGNEEALATLFGA-ERIIGGVAFLCSNRGEPGEVHHLGAGRI 146 (312)
T ss_dssp CSEEEECCC--GGGGGGHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCG-GGEEEEEEEEECCBCSSSEEEECEEEEE
T ss_pred CCEEEEecC--CCCcHHHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCC-CcEEEEEEEeeeEEcCCcEEEECCCCeE
Confidence 999999998 666678999999999999999998999874 445555432 3444322 1 1121 11111 1
Q ss_pred eEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhH
Q 004918 457 EIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (724)
Q Consensus 457 eii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~ 500 (724)
.+-..+..+.+..+.+.+++...|....+..|.-+.....++..
T Consensus 147 ~ig~~~~~~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~N 190 (312)
T 3hn2_A 147 ILGEFLPRDTGRIEELAAMFRQAGVDCRTTDDLKRARWEKLVWN 190 (312)
T ss_dssp EEEESSCCCSHHHHHHHHHHHHTTCCEEECSCHHHHHHHHHHHH
T ss_pred EEecCCCCccHHHHHHHHHHHhCCCCcEEChHHHHHHHHHHHHH
Confidence 12222334567788889999998887776677655555544433
No 184
>2cby_A ATP-dependent CLP protease proteolytic subunit 1; serine protease, endopept mycobacterium tuberculosis, ATP-dependent protease; 2.6A {Mycobacterium tuberculosis} SCOP: c.14.1.1 PDB: 2c8t_A 2ce3_A
Probab=98.87 E-value=8e-09 Score=101.83 Aligned_cols=141 Identities=17% Similarity=0.151 Sum_probs=97.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.++..+.+.+.+.|..++.++.++.|+|. +-| +++. ....++ +.|..+++||++.
T Consensus 35 ~I~~~~a~~i~~~L~~~~~~~~~k~I~l~InSPG------G~v~----------------a~~~I~-~~i~~~~~pV~~~ 91 (208)
T 2cby_A 35 EVNDEIANRLCAQILLLAAEDASKDISLYINSPG------GSIS----------------AGMAIY-DTMVLAPCDIATY 91 (208)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC------BCHH----------------HHHHHH-HHHHHCSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCCCCCEEEEEECCC------CCHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 48889999999999999877767766662 333 2221 122445 6688899999999
Q ss_pred ECccccchhHHHHhhcCE--EEEeCCceeeCcccccCccCCcchh------------------hhhcccc--cHHHHHHH
Q 004918 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT------------------QRLPRLV--GLSKAIEM 162 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~G~~P~~g~~------------------~~l~r~~--G~~~a~~l 162 (724)
+.|.|..+|..++++||. |++.+++.+++....-|. .|-. ..+.+.. ......++
T Consensus 92 v~g~AaS~g~~Ia~agd~~~~~a~p~a~igih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~ 168 (208)
T 2cby_A 92 AMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV---TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEAD 168 (208)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred ECcEeHHHHHHHHhCCCcCCEEEcCCcEEEEecccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999998 999999999987654221 1110 1122222 33446678
Q ss_pred HHcCCCCCHHHHHHCCCcceecC-cchHHHHH
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVT-SEELLKVS 193 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~-~~~l~~~a 193 (724)
+..|..++++||+++||||++.+ .+++++..
T Consensus 169 ~~~~~~~ta~eA~e~GLvD~i~~~~~~ll~~~ 200 (208)
T 2cby_A 169 SDRDRWFTAAEALEYGFVDHIITRAHVNGEAQ 200 (208)
T ss_dssp HHTTCEEEHHHHHHHTSCSEECSCC-------
T ss_pred HhCCcEEcHHHHHHcCCCcEecCchHHHHHHH
Confidence 88999999999999999999985 45555443
No 185
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=98.86 E-value=1.8e-09 Score=113.24 Aligned_cols=120 Identities=20% Similarity=0.295 Sum_probs=80.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.||.++|..++.+|+ +|+++|+++++++.....+ .... . .. ...++.. +++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l--------~~~~-~---~~-~~~~i~~-~~~~a~~ 66 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDI--------AHAA-P---VS-HGTRVWH-GGHSELA 66 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHH--------TTSC-C---TT-SCCEEEE-ECGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhh--------hhhh-h---hc-CCeEEEE-CCHHHhC
Confidence 489999999999999999999999 9999999988665322111 1110 0 00 0012332 5678899
Q ss_pred CCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCcEEE--ecCCCCCHHHHhcccCCCCCEEEE
Q 004918 387 DVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA--TNTSTIDLNIVGEKTSSQDRIIGA 444 (724)
Q Consensus 387 ~aDlVIeav--~e------------~~~~k~~v~~~l~~~~~~~~ii~--s~ts~~~~~~~~~~~~~~~r~ig~ 444 (724)
+||+||+++ |. +..+++++++++.+++ ++++++ ||++......+.... .++|++|+
T Consensus 67 ~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~vi~~tNP~~~~~~~~~~~~-~~~rviG~ 138 (304)
T 2v6b_A 67 DAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVLLVTSNPVDLLTDLATQLA-PGQPVIGS 138 (304)
T ss_dssp TCSEEEECC------------CHHHHHHHHHHHHHHHHHHC-SSSEEEECSSSHHHHHHHHHHHS-CSSCEEEC
T ss_pred CCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEEEEecCchHHHHHHHHHhC-ChhcEEeC
Confidence 999999999 32 4457789999999986 666553 555444333333433 67787775
No 186
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.82 E-value=7.7e-09 Score=108.50 Aligned_cols=107 Identities=21% Similarity=0.238 Sum_probs=74.0
Q ss_pred CCCCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC--HHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 304 KPRGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN--SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 304 ~~~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~--~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
|.++.+||+|||+|.||.++|..++..|+ +|+++|++ ++.++.....+.... .......++..++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~------------~~~~~~~~i~~t~ 71 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEAS------------PVQGFDANIIGTS 71 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHH------------HHHTCCCCEEEES
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhh------------hhccCCCEEEEcC
Confidence 44456799999999999999999999999 99999999 444433222222110 0111124577778
Q ss_pred CccCcCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 381 DYSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 381 ~~~~~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
+++++++||+||+++.- +..+.+++.+.+.++++ +++++..|
T Consensus 72 d~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p-~a~vlvvs 127 (315)
T 3tl2_A 72 DYADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSP-NAIIVVLT 127 (315)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECC
T ss_pred CHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEECC
Confidence 89999999999999721 33466777788888874 55554333
No 187
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=98.79 E-value=2e-08 Score=106.16 Aligned_cols=174 Identities=16% Similarity=0.096 Sum_probs=107.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhH-hcCCCCHHHHHHhhcCcccccCccCcC-
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLV-TRGKLTQDKANNALKMLKGVLDYSEFK- 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~-~~g~~~~~~~~~~~~~i~~~~~~~~~~- 386 (724)
+||+|||+|.||+.+|..|+++|++|++|+|++. +...+. .+.-.. ..|..+ +..+..+++.+.+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~~--~~i~~~---Gl~~~~~~~g~~~-------~~~~~~~~~~~~~~~ 70 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSDY--ETVKAK---GIRIRSATLGDYT-------FRPAAVVRSAAELET 70 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTTH--HHHHHH---CEEEEETTTCCEE-------ECCSCEESCGGGCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCChH--HHHHhC---CcEEeecCCCcEE-------EeeeeeECCHHHcCC
Confidence 5899999999999999999999999999999862 332110 000000 011100 01234456665554
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH-HHHhcccCCCCCEEEE-ecC-----CCCCC---CCe-
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKTSSQDRIIGA-HFF-----SPAHV---MPL- 455 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~~~~~r~ig~-h~~-----~p~~~---~~l- 455 (724)
++|+||.|||. ....++++++.+.++++++|++...++.. ..+.+.++.. ++++. -++ .|-.+ .+.
T Consensus 71 ~~DlVilavK~--~~~~~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~-~vl~g~~~~~a~~~~pg~v~~~~~~~ 147 (320)
T 3i83_A 71 KPDCTLLCIKV--VEGADRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDN-EVISGLAFIGVTRTAPGEIWHQAYGR 147 (320)
T ss_dssp CCSEEEECCCC--CTTCCHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTS-CEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEecCC--CChHHHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCC-cEEEEEEEeceEEcCCCEEEECCCCE
Confidence 89999999984 33457888999999999998888888764 5565555432 44432 221 12111 111
Q ss_pred eeEecCCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhh
Q 004918 456 LEIVRTERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRA 497 (724)
Q Consensus 456 veii~~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl 497 (724)
+.+-.....+.+..+.+.+++..-|....+..|.-+.....+
T Consensus 148 ~~ig~~~~~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl 189 (320)
T 3i83_A 148 LMLGNYPGGVSERVKTLAAAFEEAGIDGIATENITTARWQKC 189 (320)
T ss_dssp EEEEESSSCCCHHHHHHHHHHHHTTSCEEECSCHHHHHHHHH
T ss_pred EEEecCCCCccHHHHHHHHHHHhCCCCceECHHHHHHHHHHH
Confidence 112122233456788889999998888777677555444444
No 188
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=98.78 E-value=9.5e-09 Score=107.78 Aligned_cols=120 Identities=13% Similarity=0.214 Sum_probs=81.9
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
||+|||+|.||.++|..++..|+ +|+++|+++++++....++.+.... .+ ...++..+++++++++|
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~---~~---------~~~~i~~t~d~~a~~~a 68 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAE---LG---------VDIRISGSNSYEDMRGS 68 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHH---HT---------CCCCEEEESCGGGGTTC
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhh---cC---------CCeEEEECCCHHHhCCC
Confidence 79999999999999999999888 7999999998876433322221100 00 01346666788999999
Q ss_pred CEEEEc--------------ccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhccc----C-CCCCEEEE
Q 004918 389 DMVIEA--------------VIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 444 (724)
Q Consensus 389 DlVIea--------------v~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~----~-~~~r~ig~ 444 (724)
|+||++ +..+..+++++.+++.+++ |+++++.. +.|+..+.... . .+.|++|+
T Consensus 69 D~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~--tNPv~~~t~~~~k~~~~p~~rviG~ 140 (308)
T 2d4a_B 69 DIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYA-KDAIVVIT--TNPVDAMTYVMYKKTGFPRERVIGF 140 (308)
T ss_dssp SEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC--CSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred CEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEe--CCchHHHHHHHHHhcCCChhhEEEe
Confidence 999999 4456678899999999997 55544322 22554444332 1 24566664
No 189
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.78 E-value=1e-08 Score=107.83 Aligned_cols=103 Identities=19% Similarity=0.255 Sum_probs=74.1
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
++++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... ... ...++..++++++
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~-~~~-----------~~~~v~~t~d~~a 72 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSP-VDG-----------FDAKFTGANDYAA 72 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHH-HHT-----------CCCCEEEESSGGG
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhh-hcC-----------CCCEEEEeCCHHH
Confidence 456799999999999999999999999 999999999887643333332211 000 0134666778899
Q ss_pred cCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 385 ~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
+++||+||.++.- +..+.+++.+.+.+++ |+++++.
T Consensus 73 ~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iiv 122 (324)
T 3gvi_A 73 IEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYA-PEAFVIC 122 (324)
T ss_dssp GTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred HCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEe
Confidence 9999999999731 3456667777888887 5665543
No 190
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.76 E-value=6.3e-09 Score=108.89 Aligned_cols=92 Identities=18% Similarity=0.243 Sum_probs=68.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHH------HHHHHHhhhCC
Q 004918 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYT------SLKKWSQLYGN 692 (724)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~------~~~~~~~~~~~ 692 (724)
+++||.||++.++++||++++++|++ |++|||.++..|+|+|...-|||+++|+.|.+.... .++.+...++.
T Consensus 190 ~pGFi~NRl~~~~~~EA~~lv~eGva-s~edID~~~~~g~g~~~a~mGPf~~~Dl~G~~~~~~~~~~~~~~~~~~~~~~~ 268 (319)
T 3ado_A 190 IDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGMKRVLKSFGS 268 (319)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTTTSHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCEeHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCCCCcchhhhhhhcCccHHHHHHHhhHhHHHHHHHcCc
Confidence 68999999999999999999999999 999999999999998733349999999999765432 23333343332
Q ss_pred CCCCCHHHHHHH-HcCCCCCCCC
Q 004918 693 FFKPSRFLEERA-TKGIPLSAPV 714 (724)
Q Consensus 693 ~~~p~~~l~~~~-k~g~gfy~~~ 714 (724)
.+++-.++. |.++|||.+.
T Consensus 269 ---~p~~~~~~~~k~~~g~~~~~ 288 (319)
T 3ado_A 269 ---IPEFSGATVEKVNQAMCKKV 288 (319)
T ss_dssp ---CCCCCHHHHHHHHHHHHHHS
T ss_pred ---ccccchHHHHHHHHHHhhcC
Confidence 222222333 4568888773
No 191
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=98.76 E-value=7.6e-09 Score=108.56 Aligned_cols=101 Identities=19% Similarity=0.237 Sum_probs=76.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
+.+||+|||+|.||.++|..++..|+ +|+++|++++.++.....+.+.... . ...++..++++++
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~----~---------~~~~i~~t~d~~~ 86 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLF----L---------HTAKIVSGKDYSV 86 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGG----S---------CCSEEEEESSSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhc----c---------cCCeEEEcCCHHH
Confidence 56899999999999999999999998 9999999998876654444332110 0 1235666788988
Q ss_pred cCCCCEEEEcc--------------cCChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 385 FKDVDMVIEAV--------------IESVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 385 ~~~aDlVIeav--------------~e~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
+++||+||++. .++..+++++.+++.+++ |+++++.
T Consensus 87 ~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~-P~a~ilv 136 (330)
T 3ldh_A 87 SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHS-PDCLKEL 136 (330)
T ss_dssp CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCceEEe
Confidence 99999999874 345678888999999995 5565543
No 192
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=98.74 E-value=1.3e-08 Score=107.11 Aligned_cols=126 Identities=17% Similarity=0.339 Sum_probs=81.9
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
|+++||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... . .....++..++++++
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~---~---------~~~~~~v~~t~d~~a 70 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP---I---------EGVDFKVRGTNDYKD 70 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH---H---------HTCCCCEEEESCGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh---h---------cCCCcEEEEcCCHHH
Confidence 345799999999999999999999998 999999999876543322221110 0 000124555677899
Q ss_pred cCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecCC--CCCHHHHhcccC-CCCCEEEE
Q 004918 385 FKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTS--TIDLNIVGEKTS-SQDRIIGA 444 (724)
Q Consensus 385 ~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts--~~~~~~~~~~~~-~~~r~ig~ 444 (724)
+++||+||.+..- +..+.+++.+.+.+++ |+++++..|. ......+..... .+.|++|+
T Consensus 71 ~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd~~t~~~~k~sg~p~~rviG~ 146 (321)
T 3p7m_A 71 LENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLDIMVNMLQKFSGVPDNKIVGM 146 (321)
T ss_dssp GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHHHHHHHHHHHHCCCGGGEEEE
T ss_pred HCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchHHHHHHHHHhcCCCHHHEEee
Confidence 9999999999631 3456777778888888 5555543322 221122222223 33677775
No 193
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=98.73 E-value=2.6e-08 Score=104.74 Aligned_cols=122 Identities=18% Similarity=0.259 Sum_probs=79.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc-ccCccC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 384 (724)
|+||+|||+|.||.++|..|+++| ++|++||+++++++.....+.+... ..+ ..+.. ++++++
T Consensus 1 m~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~---~~~-----------~~~~~~~~d~~~ 66 (309)
T 1hyh_A 1 ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---NLE-----------AHGNIVINDWAA 66 (309)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---GSS-----------SCCEEEESCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhh---hcC-----------CCeEEEeCCHHH
Confidence 368999999999999999999999 7999999999887765433321110 000 11222 456688
Q ss_pred cCCCCEEEEcccCCh------------------HHHHHHHHHHHhhCCCCcEEEecCCCCCH-HHHhccc--CCCCCEEE
Q 004918 385 FKDVDMVIEAVIESV------------------PLKQKIFSELEKACPPHCILATNTSTIDL-NIVGEKT--SSQDRIIG 443 (724)
Q Consensus 385 ~~~aDlVIeav~e~~------------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~-~~~~~~~--~~~~r~ig 443 (724)
+++||+||++++... .+++++++++.++++ +++|+..|.+..+ +.+.... -.+.|++|
T Consensus 67 ~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~-~~~ii~~tNp~~~~~~~~~~~~~~~~~rvig 145 (309)
T 1hyh_A 67 LADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGF-HGVLVVISNPVDVITALFQHVTGFPAHKVIG 145 (309)
T ss_dssp GTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTC-CSEEEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred hCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEEcCcHHHHHHHHHHhcCCCHHHEee
Confidence 999999999998533 246788888988875 5555432222221 2222221 23557776
Q ss_pred E
Q 004918 444 A 444 (724)
Q Consensus 444 ~ 444 (724)
+
T Consensus 146 ~ 146 (309)
T 1hyh_A 146 T 146 (309)
T ss_dssp C
T ss_pred c
Confidence 5
No 194
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=98.71 E-value=5.5e-09 Score=110.81 Aligned_cols=117 Identities=12% Similarity=0.050 Sum_probs=81.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|++||++++..+... +.| +... ++ +.+++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~-~l~e~l~~ 210 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-----------EFQ-------------AEFV-STPELAAQ 210 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-----------TTT-------------CEEC-CHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-----------hcC-------------ceeC-CHHHHHhh
Confidence 5899999999999999999999999999999876443321 111 2222 44 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccC-CCCCEEEEecCCCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFSPA 450 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~-~~~r~ig~h~~~p~ 450 (724)
||+||+++|.+.+.+.-+.+++.+.++++++|++.+++ .....+.+.+. ..-...++++|.|.
T Consensus 211 aDvVi~~vp~~~~t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~e 276 (330)
T 2gcg_A 211 SDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPE 276 (330)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSS
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCC
Confidence 99999999977665444435566778999988744444 33355655553 23345788887654
No 195
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=98.70 E-value=7.8e-09 Score=110.36 Aligned_cols=117 Identities=15% Similarity=0.028 Sum_probs=82.0
Q ss_pred ceEEEEcCCCCcHHHHHHHH-HCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHI-LNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
++|+|||+|.||..+|..+. ..|++|++||++++..+...+ .| +...+++ +.++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~~~l~ell~ 219 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETEKA-----------LG-------------AERVDSLEELAR 219 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHH-----------HT-------------CEECSSHHHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhHhh-----------cC-------------cEEeCCHHHHhc
Confidence 58999999999999999999 999999999998765443210 01 1223344 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccCCC-CCEEEEecCCC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQ-DRIIGAHFFSP 449 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~~~-~r~ig~h~~~p 449 (724)
+||+|++++|.+.+.+.-+.+++.+.++++++|++.+++ .....+.+.+... -...++++|.+
T Consensus 220 ~aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~ 285 (348)
T 2w2k_A 220 RSDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEF 285 (348)
T ss_dssp HCSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTT
T ss_pred cCCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCC
Confidence 999999999987776655545666778999988744444 3334566655432 22367888873
No 196
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=98.69 E-value=5.3e-09 Score=112.21 Aligned_cols=109 Identities=22% Similarity=0.173 Sum_probs=81.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--------cEEEEeCCHHHHHH-HHHHHHHH--HHhhHhcCCCCHHHHHHhhcCcc
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--------YVVLKEVNSEYLLK-GIKTIEAN--VRGLVTRGKLTQDKANNALKMLK 377 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--------~V~l~d~~~~~~~~-~~~~i~~~--~~~~~~~g~~~~~~~~~~~~~i~ 377 (724)
.||+|||+|.||+++|..|+++|+ +|++|.|+++...+ ..+.++.. -.+++..-.+ ..++.
T Consensus 35 ~KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~L--------p~~i~ 106 (391)
T 4fgw_A 35 FKVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITL--------PDNLV 106 (391)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCC--------CSSEE
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcC--------CCCcE
Confidence 489999999999999999999875 49999998763211 11111110 0011111122 25688
Q ss_pred cccCc-cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC
Q 004918 378 GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (724)
Q Consensus 378 ~~~~~-~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (724)
+++|+ +++++||+||.+|| .+..+++++++.+++++++++++.+.++.
T Consensus 107 ~t~dl~~al~~ad~ii~avP--s~~~r~~l~~l~~~~~~~~~iv~~~KGie 155 (391)
T 4fgw_A 107 ANPDLIDSVKDVDIIVFNIP--HQFLPRICSQLKGHVDSHVRAISCLKGFE 155 (391)
T ss_dssp EESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTSCTTCEEEECCCSCE
T ss_pred EeCCHHHHHhcCCEEEEECC--hhhhHHHHHHhccccCCCceeEEeccccc
Confidence 88888 67899999999999 99999999999999999999988887764
No 197
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=98.67 E-value=7e-08 Score=101.45 Aligned_cols=99 Identities=18% Similarity=0.150 Sum_probs=69.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.||.++|..|+.+ |++|++||+++++++.....+.+... . .....++..++++++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~---~---------~~~~~~i~~t~d~~~l~ 68 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP---V---------GLFDTKVTGSNDYADTA 68 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH---H---------HTCCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhh---c---------ccCCcEEEECCCHHHHC
Confidence 3899999999999999999985 79999999999877743211111100 0 00123466677887799
Q ss_pred CCCEEEEcccCC--------------hHHHHHHHHHHHhhCCCCcEEE
Q 004918 387 DVDMVIEAVIES--------------VPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 387 ~aDlVIeav~e~--------------~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
+||+||++++.. ..+.+++.+.+.+++ ++++++
T Consensus 69 ~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-~~~~vi 115 (310)
T 1guz_A 69 NSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIII 115 (310)
T ss_dssp TCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEE
T ss_pred CCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCcEEE
Confidence 999999999632 245567778888886 445443
No 198
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=98.66 E-value=1.7e-08 Score=106.37 Aligned_cols=122 Identities=21% Similarity=0.293 Sum_probs=78.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
+++||+|||+|.||.++|..++..|. +|+++|++++.++.....+.+.. ...+. ..++. ++++++
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~---~~~~~---------~~~i~-~~~~~a 71 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGK---VFAPK---------PVDIW-HGDYDD 71 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHT---TSSSS---------CCEEE-ECCGGG
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHh---hhcCC---------CeEEE-cCcHHH
Confidence 45799999999999999999998875 89999999885553222222110 00000 01222 345688
Q ss_pred cCCCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccC-----CCCCEEEE
Q 004918 385 FKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTS-----SQDRIIGA 444 (724)
Q Consensus 385 ~~~aDlVIeav~--------------e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~-----~~~r~ig~ 444 (724)
+++||+||++++ ++..+++++.+.+.++++ +++++.. +-|+..+..... .+.|++|+
T Consensus 72 l~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~~iv~--tNPv~~~~~~~~~~s~~p~~rviG~ 147 (316)
T 1ldn_A 72 CRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGF-QGLFLVA--TNPVDILTYATWKFSGLPHERVIGS 147 (316)
T ss_dssp TTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTC-CSEEEEC--SSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCC-CCEEEEe--CCchHHHHHHHHHHhCCCHHHEEec
Confidence 999999999953 344788899999999974 5544322 225544433321 24466664
No 199
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=98.64 E-value=7.4e-08 Score=101.78 Aligned_cols=107 Identities=26% Similarity=0.356 Sum_probs=74.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
++||+|||+|.||..+|..|+.+|+ +|+++|+++++++.....+.+.+. . .+ ..++..+++.+++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~-~--~~----------~~~v~~~~~~~~~ 73 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS-F--YP----------TVSIDGSDDPEIC 73 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG-G--ST----------TCEEEEESCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh-h--cC----------CeEEEeCCCHHHh
Confidence 4689999999999999999999999 999999998776521111111110 0 00 1234444567888
Q ss_pred CCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecCCCCCH
Q 004918 386 KDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (724)
Q Consensus 386 ~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~ 428 (724)
++||+||.++.. +.+++++++.++.++ .++++|++.+.+...
T Consensus 74 ~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~~~ 129 (319)
T 1lld_A 74 RDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV-APNAIYMLITNPVDI 129 (319)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSHHH
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCchHH
Confidence 999999999931 235677888888887 577777665555444
No 200
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=98.64 E-value=6.4e-09 Score=110.49 Aligned_cols=115 Identities=16% Similarity=0.059 Sum_probs=80.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
-++|+|||+|.||..+|..++..|++|++||++++. +... +.| +.. .++ +.++
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~-~~l~~~l~ 203 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-----------ELN-------------AEF-KPLEDLLR 203 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HHC-------------CEE-CCHHHHHH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-----------hcC-------------ccc-CCHHHHHh
Confidence 368999999999999999999999999999999876 3221 011 112 244 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecCC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFFS 448 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~~ 448 (724)
+||+|++++|.+.+.+.-+.+++.+.++++++|++.+.+..++ .+...+. ..-...++++|.
T Consensus 204 ~aDvVil~vp~~~~t~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~ 268 (334)
T 2dbq_A 204 ESDFVVLAVPLTRETYHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFE 268 (334)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCS
T ss_pred hCCEEEECCCCChHHHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCC
Confidence 9999999999877654433356667789999886544443333 4555443 233457789887
No 201
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=98.63 E-value=9.4e-08 Score=105.38 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=56.7
Q ss_pred cceEEEEcCCCC--cHHHHHHHHHC----CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC
Q 004918 308 VRKVAVIGGGLM--GSGIATAHILN----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (724)
Q Consensus 308 ~~kI~VIG~G~m--G~~iA~~la~~----G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (724)
.+||+|||+|.| |.++|..++.. |++|++||++++.++........ ...... ...++..++|
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~----~l~~~~--------~~~~I~~ttD 70 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKK----YVEEVG--------ADLKFEKTMN 70 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHH----HHHHTT--------CCCEEEEESC
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHH----HhccCC--------CCcEEEEECC
Confidence 359999999997 56667788754 89999999999998875443322 222111 1246777888
Q ss_pred c-cCcCCCCEEEEccc
Q 004918 382 Y-SEFKDVDMVIEAVI 396 (724)
Q Consensus 382 ~-~~~~~aDlVIeav~ 396 (724)
+ +++++||+||++++
T Consensus 71 ~~eal~dAD~VIiaag 86 (480)
T 1obb_A 71 LDDVIIDADFVINTAM 86 (480)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhCCCCEEEECCC
Confidence 7 78999999999995
No 202
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.62 E-value=7.9e-08 Score=99.76 Aligned_cols=102 Identities=18% Similarity=0.273 Sum_probs=70.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.||.++|..|+..|+ +|++||++++.++....++.+....+ . ...++..++++++++
T Consensus 1 MkI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~---~---------~~~~i~~t~d~~a~~ 68 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTT---T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhc---C---------CCCEEEEeCCHHHhC
Confidence 389999999999999999999998 99999999988763222222221111 0 012466666788999
Q ss_pred CCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 387 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 387 ~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
+||+||.+..- +..+.+++.+.+.+++ |+++++..|
T Consensus 69 ~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvs 118 (294)
T 1oju_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT 118 (294)
T ss_dssp TCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred CCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEeC
Confidence 99999998732 2245556667788875 556655433
No 203
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=98.62 E-value=6.7e-09 Score=109.91 Aligned_cols=111 Identities=14% Similarity=0.051 Sum_probs=79.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|++||++++... + ....+++ +.+++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~dr~~~~~~----------------g-------------~~~~~~l~ell~~ 215 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAEAFDCPISYFSRSKKPNT----------------N-------------YTYYGSVVELASN 215 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSCCTTC----------------C-------------SEEESCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCchhcc----------------C-------------ceecCCHHHHHhc
Confidence 5799999999999999999999999999999876311 1 1123344 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC-CCCCEEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS 448 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~ 448 (724)
||+|+.++|.+.+.+.-+-++..+.++++++|++.+++..+ ..+...+. ...+..++++|.
T Consensus 216 aDvVil~vP~~~~t~~li~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~ 279 (333)
T 3ba1_A 216 SDILVVACPLTPETTHIINREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFE 279 (333)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCT
T ss_pred CCEEEEecCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCC
Confidence 99999999977655443334455667889988654444333 45555554 335677888886
No 204
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=98.61 E-value=4.1e-08 Score=107.35 Aligned_cols=107 Identities=16% Similarity=0.119 Sum_probs=76.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-CCCcEEEEe---CCHHHHHHHHHHHHHHHHhhHhcC------CCCHHHHHHhhcCcc-
Q 004918 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKE---VNSEYLLKGIKTIEANVRGLVTRG------KLTQDKANNALKMLK- 377 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~-~G~~V~l~d---~~~~~~~~~~~~i~~~~~~~~~~g------~~~~~~~~~~~~~i~- 377 (724)
+||+|||+|.||+.+|..|++ +|++|++|| ++++.++.+.+ +.+ ... .+......++.
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~~~----------~~g~~~~~~~~~-~~~~~~~~~~~~ 71 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKALG----------ADELTVIVNEKD-GTQTEVKSRPKV 71 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHHHT----------TSCEEEEEECSS-SCEEEEEECCSE
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHHHh----------hccceeeeecCC-CccceeeccceE
Confidence 589999999999999999998 599999999 87777665321 111 000 00000112343
Q ss_pred cccCc-cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH
Q 004918 378 GVLDY-SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (724)
Q Consensus 378 ~~~~~-~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~ 428 (724)
.+++. +++++||+||+||| ....+++++++.++++++++|++++++..+
T Consensus 72 ~~~~~~~a~~~aD~Vilav~--~~~~~~v~~~l~~~l~~~~ivv~~~~~~G~ 121 (404)
T 3c7a_A 72 ITKDPEIAISGADVVILTVP--AFAHEGYFQAMAPYVQDSALIVGLPSQAGF 121 (404)
T ss_dssp EESCHHHHHTTCSEEEECSC--GGGHHHHHHHHTTTCCTTCEEEETTCCTTH
T ss_pred EeCCHHHHhCCCCEEEEeCc--hHHHHHHHHHHHhhCCCCcEEEEcCCCccH
Confidence 55666 45789999999999 555789999999999999999986655553
No 205
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=98.58 E-value=1.6e-08 Score=107.17 Aligned_cols=113 Identities=18% Similarity=0.114 Sum_probs=77.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++. +.+. +.| +... ++ +.+++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~e~l~~ 200 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-----------ELK-------------ARYM-DIDELLEK 200 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-----------HHT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-----------hcC-------------ceec-CHHHHHhh
Confidence 58999999999999999999999999999999875 2211 001 1122 34 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccCC-CCCEEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTSS-QDRIIGAHFFS 448 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~~-~~r~ig~h~~~ 448 (724)
||+|++++|.+.+.+.-+-+++.+.++++ +|++.+.+..++ .+...+.. .....|+++|.
T Consensus 201 aDiVil~vp~~~~t~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~ 263 (333)
T 2d0i_A 201 SDIVILALPLTRDTYHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFE 263 (333)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCS
T ss_pred CCEEEEcCCCChHHHHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCC
Confidence 99999999987665544444556678888 775443333332 34444432 34568899987
No 206
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.56 E-value=1.3e-07 Score=101.46 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=72.9
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCc-ccccCc-cCc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML-KGVLDY-SEF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i-~~~~~~-~~~ 385 (724)
++||+|||+|.||..+|..|+++|++|++||++++.++...+.. ...+...... ...++ ..++++ +.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~~~~~~ 73 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG----AIIAEGPGLA------GTAHPDLLTSDIGLAV 73 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT----SEEEESSSCC------EEECCSEEESCHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC----CeEEeccccc------cccccceecCCHHHHH
Confidence 46899999999999999999999999999999998877643210 0000000000 00122 234555 447
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
+++|+||.|+|... ..++++++.+.++++++|++.
T Consensus 74 ~~~D~vi~~v~~~~--~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 KDADVILIVVPAIH--HASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TTCSEEEECSCGGG--HHHHHHHHGGGCCTTCEEEES
T ss_pred hcCCEEEEeCCchH--HHHHHHHHHHhCCCCCEEEEc
Confidence 89999999999544 478889999999999977765
No 207
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=98.49 E-value=2.8e-07 Score=101.71 Aligned_cols=123 Identities=15% Similarity=0.185 Sum_probs=79.5
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC-----CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~la~~-----G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
+||+|||+|.+ |.++|..|+.. +.+|++||+++++++...+.....+. ..+ ...++..++|+
T Consensus 29 ~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~---~~~---------~~~~I~~t~D~ 96 (472)
T 1u8x_X 29 FSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIR---EKA---------PDIEFAATTDP 96 (472)
T ss_dssp EEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHH---HHC---------TTSEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhc---cCC---------CCCEEEEECCH
Confidence 49999999998 55578788887 67999999999988775322221111 101 12357777887
Q ss_pred -cCcCCCCEEEEcccCCh----------------------------------HHHHHHHHHHHhhCCCCcEEEecCCCCC
Q 004918 383 -SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTSTID 427 (724)
Q Consensus 383 -~~~~~aDlVIeav~e~~----------------------------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (724)
+++++||+||.+++-.. .+.+++.+++.+++ |+++|+..|....
T Consensus 97 ~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~TNPvd 175 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNYSNPAA 175 (472)
T ss_dssp HHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSCHH
T ss_pred HHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEeCCcHH
Confidence 78999999999997411 24667778888887 4566653333322
Q ss_pred H-HHHhcccCCCCCEEEE
Q 004918 428 L-NIVGEKTSSQDRIIGA 444 (724)
Q Consensus 428 ~-~~~~~~~~~~~r~ig~ 444 (724)
+ +........+.|++|+
T Consensus 176 i~T~~~~k~~p~~rViG~ 193 (472)
T 1u8x_X 176 IVAEATRRLRPNSKILNI 193 (472)
T ss_dssp HHHHHHHHHSTTCCEEEC
T ss_pred HHHHHHHHhCCCCCEEEe
Confidence 2 2222222334477774
No 208
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=98.46 E-value=4.8e-07 Score=94.93 Aligned_cols=115 Identities=20% Similarity=0.119 Sum_probs=76.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
+||+|||+|.||+.+|..|+ +|++|++|+|+++.++...+. .+. ....+. .....+. .+.+.+.++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~~~~~~l~~~---G~~-~~~~~~-------~~~~~~~--~~~~~~~~~ 68 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQEQAAAIQSE---GIR-LYKGGE-------EFRADCS--ADTSINSDF 68 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHHHHHHHHHH---CEE-EEETTE-------EEEECCE--EESSCCSCC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCHHHHHHHHhC---Cce-EecCCC-------eeccccc--ccccccCCC
Confidence 58999999999999999999 999999999999876654321 000 000000 0001111 112456789
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH-HHhcccCCCCCEE
Q 004918 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN-IVGEKTSSQDRII 442 (724)
Q Consensus 389 DlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~-~~~~~~~~~~r~i 442 (724)
|+||.||+ .....+++..+.+. .+++ |++...++... .+...++ ..+++
T Consensus 69 D~vilavK--~~~~~~~l~~l~~~-~~~~-ivs~~nGi~~~e~l~~~~~-~~~vl 118 (307)
T 3ego_A 69 DLLVVTVK--QHQLQSVFSSLERI-GKTN-ILFLQNGMGHIHDLKDWHV-GHSIY 118 (307)
T ss_dssp SEEEECCC--GGGHHHHHHHTTSS-CCCE-EEECCSSSHHHHHHHTCCC-SCEEE
T ss_pred CEEEEEeC--HHHHHHHHHHhhcC-CCCe-EEEecCCccHHHHHHHhCC-CCcEE
Confidence 99999998 66677888888764 6777 77888888875 4444433 23444
No 209
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=98.45 E-value=8.3e-08 Score=99.28 Aligned_cols=124 Identities=10% Similarity=-0.035 Sum_probs=85.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++..+. ....+++ +.+++
T Consensus 123 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------------------------~~~~~~l~ell~~ 173 (290)
T 3gvx_A 123 KALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------------------------DVISESPADLFRQ 173 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------------------------SEECSSHHHHHHH
T ss_pred chheeeccCchhHHHHHHHHhhCcEEEEEecccccccc-----------------------------ccccCChHHHhhc
Confidence 68999999999999999999999999999998754211 1123344 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccC-CCCCEEEEecC-----CCCCCCCeeeEe
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFF-----SPAHVMPLLEIV 459 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~-~~~r~ig~h~~-----~p~~~~~lveii 459 (724)
||+|+.++|.+.+...-+-++..+.++++++|+..+.+.. ...+.+.+. ..-...++-.| +|.+..+-+.++
T Consensus 174 aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP~~pL~~~~nvilT 253 (290)
T 3gvx_A 174 SDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEPEITETNLRNAILS 253 (290)
T ss_dssp CSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTSCCSCCCSSEEEC
T ss_pred cCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCcccchhhhhhhhcC
Confidence 9999999997666554444667788899998875444433 344555443 33344555544 334445556677
Q ss_pred cC
Q 004918 460 RT 461 (724)
Q Consensus 460 ~~ 461 (724)
|+
T Consensus 254 PH 255 (290)
T 3gvx_A 254 PH 255 (290)
T ss_dssp CS
T ss_pred cc
Confidence 75
No 210
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=98.45 E-value=2.7e-07 Score=96.61 Aligned_cols=102 Identities=17% Similarity=0.199 Sum_probs=69.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.||.++|..++..|+ +|+++|+++++++....++.+..... .. -.++..++++++++
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~-~~-----------~~~v~~~~~~~a~~ 68 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIH-GF-----------DTRVTGTNDYGPTE 68 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHH-TC-----------CCEEEEESSSGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccccc-CC-----------CcEEEECCCHHHhC
Confidence 489999999999999999999987 99999999987664333333221100 00 01244456789999
Q ss_pred CCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 387 DVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 387 ~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
+||+||.+..- +..+.+++.+.+.+++ |+++++..|
T Consensus 69 ~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvt 118 (314)
T 3nep_X 69 DSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGS-PDSTIIVVA 118 (314)
T ss_dssp TCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTC-TTCEEEECC
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEecC
Confidence 99999998742 2234556666777775 555554433
No 211
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=98.44 E-value=1.6e-07 Score=102.63 Aligned_cols=73 Identities=21% Similarity=0.236 Sum_probs=55.8
Q ss_pred cceEEEEcCCCC--cHHHHHHHHH----CCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC
Q 004918 308 VRKVAVIGGGLM--GSGIATAHIL----NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (724)
Q Consensus 308 ~~kI~VIG~G~m--G~~iA~~la~----~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (724)
..||+|||+|.| |.+++..++. .| +|++||++++.+++... +. +. ... ...+++.++|
T Consensus 5 ~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~-~~---~~-l~~----------~~~~I~~TtD 68 (450)
T 3fef_A 5 QIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEV-IG---NH-SGN----------GRWRYEAVST 68 (450)
T ss_dssp CEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHH-HH---TT-STT----------SCEEEEEESS
T ss_pred CCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHH-HH---HH-Hhc----------cCCeEEEECC
Confidence 359999999998 5899988886 57 99999999998876532 11 11 111 2356888889
Q ss_pred c-cCcCCCCEEEEccc
Q 004918 382 Y-SEFKDVDMVIEAVI 396 (724)
Q Consensus 382 ~-~~~~~aDlVIeav~ 396 (724)
+ +++++||+||++++
T Consensus 69 ~~eAl~dADfVI~air 84 (450)
T 3fef_A 69 LKKALSAADIVIISIL 84 (450)
T ss_dssp HHHHHTTCSEEEECCC
T ss_pred HHHHhcCCCEEEeccc
Confidence 8 67899999999995
No 212
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.44 E-value=2e-07 Score=98.18 Aligned_cols=103 Identities=27% Similarity=0.336 Sum_probs=70.8
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcc-cccCc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~ 382 (724)
+..+||+|||+|.||.++|..|+..|+ +|+++|+++++++....++.+... ... ..+. .++++
T Consensus 3 ~~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~-~~~-------------~~v~i~~~~~ 68 (326)
T 3pqe_A 3 KHVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA-FAP-------------QPVKTSYGTY 68 (326)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG-GSS-------------SCCEEEEECG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc-ccc-------------CCeEEEeCcH
Confidence 346799999999999999999999997 999999999887654433333211 000 1112 24567
Q ss_pred cCcCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 383 SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 383 ~~~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
+++++||+||.++.- +..+.+++.+.+.++++ +++++..|
T Consensus 69 ~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p-~a~vlvvt 122 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGF-DGIFLVAT 122 (326)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTC-CSEEEECS
T ss_pred HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcC-CeEEEEcC
Confidence 899999999999832 22345566677777765 55554433
No 213
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=98.44 E-value=1.9e-07 Score=98.27 Aligned_cols=102 Identities=20% Similarity=0.247 Sum_probs=72.5
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
.+.+||+|||+|.||.++|..++..|+ +|+++|+++++++....++.+... .. ....+..+++++
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~----~~---------~~~~i~~~~d~~ 83 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL----FL---------KTPKIVSSKDYS 83 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG----GC---------SCCEEEECSSGG
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh----cc---------CCCeEEEcCCHH
Confidence 456799999999999999999999998 899999998876654433332110 00 012344567888
Q ss_pred CcCCCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 384 EFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 384 ~~~~aDlVIeav~--------------e~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
++++||+||.+.. .+..+.+++.+.+.++++ +++++.
T Consensus 84 ~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~vlv 134 (331)
T 4aj2_A 84 VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSP-QCKLLI 134 (331)
T ss_dssp GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TCEEEE
T ss_pred HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCC-CeEEEE
Confidence 9999999998862 133566677778888854 555543
No 214
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=98.43 E-value=4.6e-08 Score=102.14 Aligned_cols=163 Identities=12% Similarity=0.034 Sum_probs=103.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc-CC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF-KD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~-~~ 387 (724)
+||+|||+|.||+.+|..|+++|++|++|+|+++.++. ....|... ..+. .+..+++ ++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~~~~~~-----------~~~~g~~~--------~~~~-~~~~~~~~~~ 62 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHAKTITY-----------YTVPHAPA--------QDIV-VKGYEDVTNT 62 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSCEEEEE-----------ESSTTSCC--------EEEE-EEEGGGCCSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEeccCcEEE-----------EecCCeec--------ccee-cCchHhcCCC
Confidence 58999999999999999999999999999999754321 00112110 1111 1223444 88
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEE------ecCCCCCCC-CeeeEec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGA------HFFSPAHVM-PLLEIVR 460 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~------h~~~p~~~~-~lveii~ 460 (724)
+|+||.||+ .....++++++.+.++++++|++...++...+. +. ..++++. ....|-... ....+.-
T Consensus 63 ~D~vilavk--~~~~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~---~~-~~~v~~g~~~~~a~~~~pg~v~~~~~~~~~ 136 (294)
T 3g17_A 63 FDVIIIAVK--THQLDAVIPHLTYLAHEDTLIILAQNGYGQLEH---IP-FKNVCQAVVYISGQKKGDVVTHFRDYQLRI 136 (294)
T ss_dssp EEEEEECSC--GGGHHHHGGGHHHHEEEEEEEEECCSSCCCGGG---CC-CSCEEECEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CCEEEEeCC--ccCHHHHHHHHHHhhCCCCEEEEeccCcccHhh---CC-CCcEEEEEEEEEEEEcCCCEEEECCCEEec
Confidence 999999998 667788999999999999999888888876554 22 2333332 111221110 0001111
Q ss_pred CCCCCHHHHHHHHHHHHHcCCeeEEEcCCCchhhhhhhhH
Q 004918 461 TERTSAQVILDLMTVGKIIKKVPVVVGNCTGFAVNRAFFP 500 (724)
Q Consensus 461 ~~~t~~e~~~~~~~l~~~lGk~~v~v~d~pG~i~nRl~~~ 500 (724)
+ +.+..+.+.+++..-|....+..|.-+.....++..
T Consensus 137 ~---~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N 173 (294)
T 3g17_A 137 Q---DNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVN 173 (294)
T ss_dssp E---CSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHH
T ss_pred C---ccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHH
Confidence 1 345667777777777777766677666555555443
No 215
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=98.40 E-value=8.5e-08 Score=108.14 Aligned_cols=148 Identities=14% Similarity=0.137 Sum_probs=95.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||+++|..+...|++|++||+++.. +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~a~-----------~~g-------------~~~~-~l~e~~~~ 196 (529)
T 1ygy_A 143 KTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSP-ARAA-----------QLG-------------IELL-SLDDLLAR 196 (529)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCH-HHHH-----------HHT-------------CEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEECCCCCh-hHHH-----------hcC-------------cEEc-CHHHHHhc
Confidence 68999999999999999999999999999998742 2211 111 1112 33 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH--HhcccCCCCCE--EEEecC-------CCCCCCCee
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI--VGEKTSSQDRI--IGAHFF-------SPAHVMPLL 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~--~~~~~~~~~r~--ig~h~~-------~p~~~~~lv 456 (724)
||+|+.|+|.+.+...-+-+++.+.++++++|++.+.+..+.+ +...+.. .++ .++.+| +|....+.+
T Consensus 197 aDvV~l~~P~~~~t~~~i~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~-g~i~ga~lDv~~~eP~~~~~L~~~~~v 275 (529)
T 1ygy_A 197 ADFISVHLPKTPETAGLIDKEALAKTKPGVIIVNAARGGLVDEAALADAITG-GHVRAAGLDVFATEPCTDSPLFELAQV 275 (529)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHT-SSEEEEEESSCSSSSCSCCGGGGCTTE
T ss_pred CCEEEECCCCchHHHHHhCHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHc-CCccEEEEeeccCCCCCCchHHhCCCE
Confidence 9999999996644433322346677899998876655544443 3344422 122 233333 122333456
Q ss_pred eEecCCC-CCHHHHHH-----HHHHHHHcCCee
Q 004918 457 EIVRTER-TSAQVILD-----LMTVGKIIKKVP 483 (724)
Q Consensus 457 eii~~~~-t~~e~~~~-----~~~l~~~lGk~~ 483 (724)
.++|+.. +++++.+. +..+...++..+
T Consensus 276 ilTPh~~~~t~ea~~~~~~~~~~~l~~~l~~~~ 308 (529)
T 1ygy_A 276 VVTPHLGASTAEAQDRAGTDVAESVRLALAGEF 308 (529)
T ss_dssp EECSSCSSCBHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEccccCCCCHHHHHHHHHHHHHHHHHHHcCCC
Confidence 6888776 67887765 667777777654
No 216
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=98.39 E-value=2.9e-07 Score=96.99 Aligned_cols=138 Identities=12% Similarity=0.056 Sum_probs=84.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeC-CHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEV-NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~-~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
++|+|||+|.||.++|..+...|++|++||+ +++.. .+. +.| +...+++ +.++
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~~-----------~~g-------------~~~~~~l~ell~ 201 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DEA-----------SYQ-------------ATFHDSLDSLLS 201 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HHH-----------HHT-------------CEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hhh-----------hcC-------------cEEcCCHHHHHh
Confidence 6899999999999999999999999999999 87652 111 111 1122234 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccCC-CCCEEEEecC--CC-----CCCCCee
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSS-QDRIIGAHFF--SP-----AHVMPLL 456 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~~-~~r~ig~h~~--~p-----~~~~~lv 456 (724)
+||+|+.++|.+.+...-+-++..+.++++++|++.+++ .....+...+.. .-.-.++.+| .| ....+.+
T Consensus 202 ~aDvVil~~p~~~~t~~~i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nv 281 (320)
T 1gdh_A 202 VSQFFSLNAPSTPETRYFFNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNT 281 (320)
T ss_dssp HCSEEEECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTE
T ss_pred hCCEEEEeccCchHHHhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCE
Confidence 999999999976654332224566778999988765555 233345554432 1122234444 23 2333446
Q ss_pred eEecCCCC-CHHHHHH
Q 004918 457 EIVRTERT-SAQVILD 471 (724)
Q Consensus 457 eii~~~~t-~~e~~~~ 471 (724)
.++|+... +.++...
T Consensus 282 iltPH~~~~t~~~~~~ 297 (320)
T 1gdh_A 282 FLFPHIGSAATQARED 297 (320)
T ss_dssp EECSSCTTCBHHHHHH
T ss_pred EECCcCCcCcHHHHHH
Confidence 66665433 4444333
No 217
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=98.30 E-value=1.2e-06 Score=90.57 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=71.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.+|.++|..++.++. +++++|++++.++.-..++.+..... + ....+..++++++++
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~---~---------~~~~i~~~~d~~~~~ 68 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGI---D---------KYPKIVGGADYSLLK 68 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGG---T---------CCCEEEEESCGGGGT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccC---C---------CCCeEecCCCHHHhC
Confidence 489999999999999999998876 89999999877654333333321100 0 012345577889999
Q ss_pred CCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 387 DVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 387 ~aDlVIeav~--------------e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
+||+||.+.- .|..+.+++.+++.++++. ++++..|.
T Consensus 69 ~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~-aivlvvsN 119 (294)
T 2x0j_A 69 GSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPE-SKILVVTN 119 (294)
T ss_dssp TCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTT-CEEEECSS
T ss_pred CCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEecC
Confidence 9999998862 1455667777788888754 45544333
No 218
>2f6i_A ATP-dependent CLP protease, putative; structural genomics, structural genomics conso SGC, hydrolase; 2.45A {Plasmodium falciparum} SCOP: c.14.1.1
Probab=98.30 E-value=3.1e-06 Score=83.44 Aligned_cols=136 Identities=12% Similarity=0.099 Sum_probs=93.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.++..+.+.+.+.|..++.++. +.|+| .+-| +++. ....++ +.|..+++||++.
T Consensus 47 ~I~~~~a~~i~~~L~~l~~~~~-k~I~l~INSPG------Gsv~----------------a~~~I~-~~i~~~~~pV~t~ 102 (215)
T 2f6i_A 47 EINKKTADELISQLLYLDNINH-NDIKIYINSPG------GSIN----------------EGLAIL-DIFNYIKSDIQTI 102 (215)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCC-SCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhCCC-CcEEEEEECCC------CCHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 4788889999999998876555 66666 3333 2221 122445 6688899999999
Q ss_pred ECccccchhHHHHhhcCE--EEEeCCceeeCcccccCccC---Ccchhh-hh-----------c--ccccHHHHHHHHHc
Q 004918 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIP---GFGGTQ-RL-----------P--RLVGLSKAIEMMLL 165 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~G~~P---~~g~~~-~l-----------~--r~~G~~~a~~l~lt 165 (724)
+.|.|..+|.-++++||. |+|.++|.+++.....|... +..... .+ . +-.......+++-.
T Consensus 103 v~g~AAS~g~~Ia~agd~g~i~a~p~s~i~ih~p~~~~~G~~~di~~~~~el~~~~~~i~~~ya~~~g~~~e~i~~~~~~ 182 (215)
T 2f6i_A 103 SFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEILYLKKLLYHYLSSFTNQTVETIEKDSDR 182 (215)
T ss_dssp EEEEECHHHHHHHHTSCTTCEEECTTCEEESSCTTCSCC--------CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHT
T ss_pred EeeEhHhHHHHHHHcCCcccEEEcCCCEEEEeccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHhC
Confidence 999999999999999999 99999999987665433210 000000 00 0 01233455555555
Q ss_pred CCCCCHHHHHHCCCcceecCc
Q 004918 166 SKSITSEEGWKLGLIDAVVTS 186 (724)
Q Consensus 166 g~~i~a~eA~~~Glv~~vv~~ 186 (724)
+..++++||++.||||+|.+.
T Consensus 183 ~~~lta~eA~e~GLiD~I~~~ 203 (215)
T 2f6i_A 183 DYYMNALEAKQYGIIDEVIET 203 (215)
T ss_dssp TCEECHHHHHHHTSCSEECCC
T ss_pred CeecCHHHHHHCCCCCEecCC
Confidence 667899999999999999854
No 219
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=98.29 E-value=3.8e-07 Score=95.93 Aligned_cols=127 Identities=10% Similarity=0.057 Sum_probs=83.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 138 ktvGIiGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 191 (324)
T 3evt_A 138 QQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPADHF--------------------------HETVAFTATADALAT 191 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCCCCTTC--------------------------SEEEEGGGCHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCEEEEECCCcchhHhH--------------------------hhccccCCHHHHHhh
Confidence 689999999999999999999999999999987542110 001112233 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccC-CCCCEEEEecCC--C------CCCCCee
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHFFS--P------AHVMPLL 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~-~~~r~ig~h~~~--p------~~~~~lv 456 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ .....+.+.+. ..-...++-.|. | .+..+-|
T Consensus 192 aDvV~l~lPlt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nv 271 (324)
T 3evt_A 192 ANFIVNALPLTPTTHHLFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDV 271 (324)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSE
T ss_pred CCEEEEcCCCchHHHHhcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCE
Confidence 99999999977776555556677788999988754443 33345555553 223344554442 2 2333446
Q ss_pred eEecC
Q 004918 457 EIVRT 461 (724)
Q Consensus 457 eii~~ 461 (724)
.++|+
T Consensus 272 ilTPH 276 (324)
T 3evt_A 272 LITPH 276 (324)
T ss_dssp EECCS
T ss_pred EEcCc
Confidence 66664
No 220
>3qwd_A ATP-dependent CLP protease proteolytic subunit; caseinolytic protease, serin-protease, hydrolase; 2.10A {Staphylococcus aureus subsp} SCOP: c.14.1.1 PDB: 3v5e_A 3v5i_A 3sta_V 3st9_A
Probab=98.28 E-value=3.5e-06 Score=82.10 Aligned_cols=137 Identities=20% Similarity=0.257 Sum_probs=98.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.++..+.+.+.+.|..++.++..+.|+| .+-|+ ++. ....++ +.|..+++||++.
T Consensus 35 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG------~v~----------------~~~~I~-~~i~~~~~~V~t~ 91 (203)
T 3qwd_A 35 QIDDNVANSIVSQLLFLQAQDSEKDIYLYINSPGG------SVT----------------AGFAIY-DTIQHIKPDVQTI 91 (203)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCC------CHH----------------HHHHHH-HHHHHhcCCcEEE
Confidence 4899999999999999987766666555 34332 221 122445 6688899999999
Q ss_pred ECccccchhHHHHhhcC--EEEEeCCceeeCcccccCccCCcchh-----hh-----------hccc--ccHHHHHHHHH
Q 004918 105 VEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGT-----QR-----------LPRL--VGLSKAIEMML 164 (724)
Q Consensus 105 v~G~a~GgG~~lalacD--~ria~~~a~f~~pe~~~G~~P~~g~~-----~~-----------l~r~--~G~~~a~~l~l 164 (724)
+.|.|.++|.-++++|| .|++.++++|......-|. -|...- .. +.+. .......+++-
T Consensus 92 ~~G~AaSag~~i~~ag~~g~r~~~p~a~imiHqP~~~~-~G~a~di~~~a~~l~~~~~~~~~~~a~~tG~~~e~i~~~~~ 170 (203)
T 3qwd_A 92 CIGMAASMGSFLLAAGAKGKRFALPNAEVMIHQPLGGA-QGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTD 170 (203)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEECCCCSSST-TTTSCHHHHHHHHHTTHHHHHHHHHHHHHCCCHHHHHHHHT
T ss_pred EeeeehhHHHHHHHcCCcCeEEEcCCceEEEecccccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 99999999999999999 6999999999886554321 111000 00 1111 23455666777
Q ss_pred cCCCCCHHHHHHCCCcceecCcc
Q 004918 165 LSKSITSEEGWKLGLIDAVVTSE 187 (724)
Q Consensus 165 tg~~i~a~eA~~~Glv~~vv~~~ 187 (724)
....++|+||++.||||+|+...
T Consensus 171 ~d~~lta~EA~e~GliD~I~~~~ 193 (203)
T 3qwd_A 171 RDNFLTAEEAKEYGLIDEVMVPE 193 (203)
T ss_dssp SCCCEEHHHHHHHTSCSEECCCC
T ss_pred cCceecHHHHHHcCCcCEecCCc
Confidence 77889999999999999998654
No 221
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=98.28 E-value=9.2e-07 Score=92.55 Aligned_cols=137 Identities=16% Similarity=0.088 Sum_probs=84.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++. +.+. +.| +... ++ +.+++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-----------~~g-------------~~~~-~l~ell~~ 196 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERAK-----------EVN-------------GKFV-DLETLLKE 196 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-----------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-----------hcC-------------cccc-CHHHHHhh
Confidence 68999999999999999999999999999999875 2211 111 1111 33 45678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC-CCCCEEEEecCC--CC------CCCCee
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS-SQDRIIGAHFFS--PA------HVMPLL 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~-~~~r~ig~h~~~--p~------~~~~lv 456 (724)
||+|+.++|.+.+...-+-++..+.++++++++..+++-.+ ..+...+. ..-.-.++.+|. |. +..+.+
T Consensus 197 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nv 276 (307)
T 1wwk_A 197 SDVVTIHVPLVESTYHLINEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNV 276 (307)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTE
T ss_pred CCEEEEecCCChHHhhhcCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCE
Confidence 99999999976654432224555678999988765554333 24444443 222334444443 22 233446
Q ss_pred eEecCCCC-CHHHHHH
Q 004918 457 EIVRTERT-SAQVILD 471 (724)
Q Consensus 457 eii~~~~t-~~e~~~~ 471 (724)
.++|+... +.++...
T Consensus 277 iltPh~~~~t~~~~~~ 292 (307)
T 1wwk_A 277 VLTPHIGASTVEAQER 292 (307)
T ss_dssp EECSSCTTCBHHHHHH
T ss_pred EECCccccCcHHHHHH
Confidence 66665432 3444433
No 222
>2w3p_A Benzoyl-COA-dihydrodiol lyase; BOXC, crotonase, ring cleaving, burkholderia xenovorans LB400 crotonase; 1.50A {Burkholderia xenovorans}
Probab=98.27 E-value=5.1e-06 Score=91.16 Aligned_cols=201 Identities=17% Similarity=0.199 Sum_probs=145.2
Q ss_pred CCcEEEEEe-cCcEEEEEeCCCC---C-----------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEcCCCCccCCCC
Q 004918 3 APRVTMEVG-NDGVAIITLINPP---V-----------NALAIPIVAGLKDKFEEAT-SRDDVKAIVLTGNGGRFSGGFD 66 (724)
Q Consensus 3 ~~~v~~~~~-~~~v~~i~l~~p~---~-----------Nal~~~~~~~l~~~l~~~~-~d~~v~~vVl~g~g~~F~aG~D 66 (724)
|+.+...++ ..+++.++...|. . +.....|..||.+++-.+. +++++...++...|..
T Consensus 265 y~~~~~ai~ra~r~a~~~~~g~~~a~~~~ld~i~aa~~~~~~l~~~~el~~All~l~~ne~~~~~~~~~t~g~~------ 338 (556)
T 2w3p_A 265 YKTLDVTIDRAKRIATFTAKAPQTEPPASIDAIVAAGANWWPLKFAREFDDAILSMRTNELAVGTWVFRTEGDA------ 338 (556)
T ss_dssp ETTEEEEEETTTTEEEEEEECCSSCCCCSHHHHHHHGGGSHHHHHHHHHHHHHHHHHHHCSSCCEEEEEEESCH------
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHhhhcchhhhhhhHHHHHHHhhhhccHHHhHhhhhccCCH------
Confidence 344545443 4568888887762 1 3344668899976666664 5678999998776643
Q ss_pred chhhh-------hccCCCcccccchhHHHHHHHHHhcCCCcEEEEE-Cccccchh-HHHHhhcCEEEEeC-------Cce
Q 004918 67 INVFQ-------KVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV-EGLALGGG-LELAMGCHARIAAP-------KTQ 130 (724)
Q Consensus 67 l~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav-~G~a~GgG-~~lalacD~ria~~-------~a~ 130 (724)
..+. ...+..-+.+...+..+.+ .+|--...-++|.| .|.|+.|- +||+++||..++-+ .+.
T Consensus 339 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~d~~~~~~~~~~~~~~~~~g~~~e~~~~~~~~~~~~~~~~~~~~~~ 416 (556)
T 2w3p_A 339 -RHLLAADASLMQHKDHWFVRETIGLLRRTL-ARIDVSSRSLFALIEPGSCFAGTFAELAFAADRTYMAALPANEDEEPA 416 (556)
T ss_dssp -HHHHHHHHHHHHTTTSHHHHHHHHHHHHHH-HHHHTCSSEEEEEECTTCCEEGGGHHHHHTSSEEEECCCTTCTTTSCC
T ss_pred -HHHhhhHHHHHhccchHHHHHHHHHHHHHH-HHhcccchhheeeecCCcchHHHHHHHHHHhhhhhhhcCCCCCCCCce
Confidence 2221 1111222233344444555 55777788889988 68998775 59999999999962 378
Q ss_pred eeCcccccCccCCcchhhhhcccc-cHHHHHHHH--HcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccCchh
Q 004918 131 LGLPELTLGVIPGFGGTQRLPRLV-GLSKAIEMM--LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 207 (724)
Q Consensus 131 f~~pe~~~G~~P~~g~~~~l~r~~-G~~~a~~l~--ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~~~~ 207 (724)
+.+.+.++|..|-..+..||.+++ |.....+.+ ..|+++++++|.++|||+...++-+.+++++-..++-++.||.+
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 496 (556)
T 2w3p_A 417 ITLSEVNFGLYPMVTHQSRLARRFYEETEPLDAVRSRIGQAIKPVEAERLGLVTASPDDIDWADEIRIALEERAAMSPDA 496 (556)
T ss_dssp EECCGGGGTTSCCTTSSCHHHHHTTTCHHHHHHHHTTTTSCBCHHHHHHTTSSSBCCCTTTHHHHHHHHHHHHHHSCHHH
T ss_pred eEeeccccCcccCCCchhHHHHHhcCCcchHHHHHHHhCCCCCHHHHHhcCCeecCcccCChHHHHHHHHHHHhccCcch
Confidence 999999999999888888887765 433333322 46999999999999999999999999999999999999999987
Q ss_pred hhhh
Q 004918 208 IRSL 211 (724)
Q Consensus 208 ~~~~ 211 (724)
+.-+
T Consensus 497 ~~~~ 500 (556)
T 2w3p_A 497 LTGL 500 (556)
T ss_dssp HHHH
T ss_pred hccc
Confidence 6544
No 223
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=98.27 E-value=5.9e-07 Score=95.42 Aligned_cols=104 Identities=12% Similarity=0.084 Sum_probs=72.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|+.||+++...+...+ .| +...+++ +.+++
T Consensus 165 ktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~-----------~g-------------~~~~~~l~ell~~ 220 (351)
T 3jtm_A 165 KTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKE-----------TG-------------AKFVEDLNEMLPK 220 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHH-----------HC-------------CEECSCHHHHGGG
T ss_pred CEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHh-----------CC-------------CeEcCCHHHHHhc
Confidence 58999999999999999999999999999998643332211 01 2223344 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC--CHHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~ 436 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+- ....+...+.
T Consensus 221 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 271 (351)
T 3jtm_A 221 CDVIVINMPLTEKTRGMFNKELIGKLKKGVLIVNNARGAIMERQAVVDAVE 271 (351)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEECCCCCHHHHHhhcHHHHhcCCCCCEEEECcCchhhCHHHHHHHHH
Confidence 999999999766655444456677789999887544433 3334555443
No 224
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=98.24 E-value=1.1e-06 Score=91.80 Aligned_cols=125 Identities=10% Similarity=0.009 Sum_probs=82.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++ +. + .....++ +.++.
T Consensus 125 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~dr~~~--~~---------------~-------------~~~~~~l~ell~~ 174 (303)
T 1qp8_A 125 EKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPK--EG---------------P-------------WRFTNSLEEALRE 174 (303)
T ss_dssp CEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCC--CS---------------S-------------SCCBSCSHHHHTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcc--cc---------------C-------------cccCCCHHHHHhh
Confidence 6899999999999999999999999999999875 10 1 0112234 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecC---CCC------CCCCe
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF---SPA------HVMPL 455 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~---~p~------~~~~l 455 (724)
||+|+.++|.+.+...-+-++..+.++++++++..+++-.+. .+...+. ..-.-.+...| .|. +..+-
T Consensus 175 aDvV~l~~P~~~~t~~~i~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~n 254 (303)
T 1qp8_A 175 ARAAVCALPLNKHTRGLVKYQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPN 254 (303)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTT
T ss_pred CCEEEEeCcCchHHHHHhCHHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCC
Confidence 999999999776544333346667889999887544443332 3444443 22334566655 332 22344
Q ss_pred eeEecCCC
Q 004918 456 LEIVRTER 463 (724)
Q Consensus 456 veii~~~~ 463 (724)
+.++|+..
T Consensus 255 viltPH~~ 262 (303)
T 1qp8_A 255 VVATPWVA 262 (303)
T ss_dssp EEECCSCS
T ss_pred EEECCCcC
Confidence 66666543
No 225
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.23 E-value=1.3e-06 Score=91.92 Aligned_cols=65 Identities=20% Similarity=0.241 Sum_probs=54.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHhhcCcCCChhHHHHHHHHccCCCCCCCcHhHHHHHhCHHHHHHHHHH
Q 004918 619 TEKEIVEMILFPVVNESCRVLEEGIVVRASDLDDASVLGMSFPSYRGGIVFWADAVGANYVYTSLKK 685 (724)
Q Consensus 619 ~~~~i~~r~~~~~~~ea~~~l~~gv~~~~~~iD~~~~~g~g~p~~~~Gp~~~~d~~G~~~~~~~~~~ 685 (724)
.+++++||++.++++||+.++++|++ |+++||.++..|+|+|..--|||+++|+.| +.+.+.+++
T Consensus 190 ~~Gfi~Nrll~a~~~EA~~l~~~g~~-~~~~id~a~~~g~g~~~a~~GP~~~~dl~g-~g~~~~~~~ 254 (319)
T 2dpo_A 190 IDGFVLNRLQYAIISEAWRLVEEGIV-SPSDLDLVMSDGLGMRYAFIGPLETMHLNA-EGMLSYSDR 254 (319)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHTTSS-CHHHHHHHHHTTHHHHHTTSCHHHHHHHTT-TSHHHHHHH
T ss_pred cCCchHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHhCCCCCccccCHHHHHHhcC-chHHHHHHH
Confidence 36789999999999999999999999 999999999999998832339999999996 544444443
No 226
>1yg6_A ATP-dependent CLP protease proteolytic subunit; endopeptidase CLP, caseinolytic protease, protease TI, heat shock protein F21.5, hydrolase; 1.90A {Escherichia coli} SCOP: c.14.1.1 PDB: 1tyf_A 2fzs_A* 3mt6_R 1yg8_A 3hln_A 2zl2_A 2zl0_A 2zl4_A 2zl3_A 3tt7_A* 3tt6_A 3ktg_A 3kth_A 3kti_A* 3ktj_A* 3ktk_A* 3q7h_A
Probab=98.23 E-value=2e-06 Score=83.55 Aligned_cols=134 Identities=16% Similarity=0.170 Sum_probs=94.9
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEE--cCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVLT--GNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl~--g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.++..+.+.+.+.|..++.++..+.|+|. +-|+ ++. ....++ +.|..+++||++.
T Consensus 34 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~InSPGG------~v~----------------a~~~I~-~~i~~~~~pV~~~ 90 (193)
T 1yg6_A 34 QVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGG------VIT----------------AGMSIY-DTMQFIKPDVSTI 90 (193)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEECcCC------CHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 48888999999999999877667777763 3332 221 122445 6688899999999
Q ss_pred ECccccchhHHHHhhcCE--EEEeCCceeeCcccccCccCCcchh-h-----------------hhccc--ccHHHHHHH
Q 004918 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGT-Q-----------------RLPRL--VGLSKAIEM 162 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~G~~P~~g~~-~-----------------~l~r~--~G~~~a~~l 162 (724)
+.|.|..+|.-++++||. |++.+++.++......|. .|-. . .+.+. .......++
T Consensus 91 v~g~AaS~g~~Ia~ag~~~~r~a~p~s~i~ih~p~~~~---~G~~~d~~~~~~~l~~~~~~~~~~~a~~~g~~~~~i~~~ 167 (193)
T 1yg6_A 91 CMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGY---QGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERD 167 (193)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EeeeHHHHHHHHHHCCCcCcEEEecCcEEEEEeccccc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999 999999998875543221 1110 0 01111 123444455
Q ss_pred HHcCCCCCHHHHHHCCCcceecCc
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTS 186 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~ 186 (724)
+-.+..++++||+++||||++..+
T Consensus 168 ~~~~~~~ta~eA~~~GliD~i~~~ 191 (193)
T 1yg6_A 168 TERDRFLSAPEAVEYGLVDSILTH 191 (193)
T ss_dssp TSSCEEEEHHHHHHHTSSSEECCC
T ss_pred hcCCeEEcHHHHHHcCCCCEecCC
Confidence 445667799999999999999854
No 227
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=98.22 E-value=4.2e-07 Score=96.07 Aligned_cols=110 Identities=15% Similarity=0.106 Sum_probs=65.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++.. .+ .....++ +.+++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~----------------~~-------------~~~~~sl~ell~~ 222 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAEAFGMSVRYWNRSTLSG----------------VD-------------WIAHQSPVDLARD 222 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCTT----------------SC-------------CEECSSHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCcccc----------------cC-------------ceecCCHHHHHhc
Confidence 689999999999999999999999999999987530 00 1112344 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhcccC-CCCCEEEEecC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKTS-SQDRIIGAHFF 447 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~~-~~~r~ig~h~~ 447 (724)
||+|+.++|...+...-+-++..+.++++++|+..+.+-.+. .+.+.+. ..-...++-.|
T Consensus 223 aDvVil~vP~t~~t~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf 285 (340)
T 4dgs_A 223 SDVLAVCVAASAATQNIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVF 285 (340)
T ss_dssp CSEEEECC----------CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCC
T ss_pred CCEEEEeCCCCHHHHHHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCc
Confidence 999999999777666555567778899999887555444433 3444443 22234455444
No 228
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.22 E-value=1e-06 Score=92.55 Aligned_cols=101 Identities=20% Similarity=0.247 Sum_probs=69.0
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcc-cccCcc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLK-GVLDYS 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~-~~~~~~ 383 (724)
..+||+|||+|.||.++|..++..|+ +|+++|+++++++.....+.+... .+..+. .+.+++
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~---------------~~~~~~i~~~~~~ 72 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP---------------FTSPKKIYSAEYS 72 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG---------------GSCCCEEEECCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh---------------hcCCcEEEECcHH
Confidence 34699999999999999999999988 899999999877654333322110 011222 245678
Q ss_pred CcCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 384 EFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 384 ~~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
++++||+||.+..- +..+.+++.+.+.++++ +++++..|
T Consensus 73 a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvvt 125 (326)
T 3vku_A 73 DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVAA 125 (326)
T ss_dssp GGTTCSEEEECCCCC----------------CHHHHHHHHHTTTC-CSEEEECS
T ss_pred HhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEcc
Confidence 99999999998631 33455667777888765 55554433
No 229
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=98.22 E-value=1.3e-06 Score=92.79 Aligned_cols=92 Identities=11% Similarity=0.099 Sum_probs=67.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||+++.. +.+ .+.| +...+++ +.+++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~-----------~~~g-------------~~~~~~l~ell~~ 215 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENSK-ERA-----------RADG-------------FAVAESKDALFEQ 215 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHHH-HHH-----------HHTT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCCH-HHH-----------HhcC-------------ceEeCCHHHHHhh
Confidence 68999999999999999999999999999998643 211 1111 2223344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
||+|+.++|-+.+...-+-++..+.++++++|+..+.+
T Consensus 216 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg 253 (352)
T 3gg9_A 216 SDVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRA 253 (352)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCG
T ss_pred CCEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCc
Confidence 99999999977666554445667788999988754433
No 230
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.22 E-value=1e-06 Score=93.25 Aligned_cols=96 Identities=15% Similarity=0.200 Sum_probs=70.3
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-
Q 004918 307 GVRKVAVIGG-GLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (724)
Q Consensus 307 ~~~kI~VIG~-G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (724)
..+||+|||+ |.+|.++|..++..|. +|+++|+++++++.....+.+.. .. ..++..++++
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~--------~~-------~~~i~~t~d~~ 71 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG--------FE-------GLNLTFTSDIK 71 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC--------CT-------TCCCEEESCHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc--------CC-------CCceEEcCCHH
Confidence 3579999998 9999999999999985 89999999987665433333210 10 1246666776
Q ss_pred cCcCCCCEEEEccc--------------CChHHHHHHHHHHHhhCCCCc
Q 004918 383 SEFKDVDMVIEAVI--------------ESVPLKQKIFSELEKACPPHC 417 (724)
Q Consensus 383 ~~~~~aDlVIeav~--------------e~~~~k~~v~~~l~~~~~~~~ 417 (724)
+++++||+||.++. .+..+.+++.+.+.+++++..
T Consensus 72 ~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~ 120 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCK 120 (343)
T ss_dssp HHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcE
Confidence 67999999999862 234566777788888886554
No 231
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=98.19 E-value=7.7e-07 Score=93.43 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=70.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++... +. +.| +.. .++ +.+++
T Consensus 143 ~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-----------~~g-------------~~~-~~l~ell~~ 196 (313)
T 2ekl_A 143 KTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIREK-AE-----------KIN-------------AKA-VSLEELLKN 196 (313)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHHH-HH-----------HTT-------------CEE-CCHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchhH-HH-----------hcC-------------cee-cCHHHHHhh
Confidence 6899999999999999999999999999999987532 11 111 111 133 45788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~ 436 (724)
||+|+.++|...+...-+-++..+.+++++++++.+++-.+ ..+.+.+.
T Consensus 197 aDvVvl~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 247 (313)
T 2ekl_A 197 SDVISLHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRAVAVNGKALLDYIK 247 (313)
T ss_dssp CSEEEECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCChHHHHhhCHHHHhcCCCCCEEEECCCCcccCHHHHHHHHH
Confidence 99999999976654322224455678899988765554333 34455543
No 232
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=98.18 E-value=2.2e-06 Score=92.52 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=68.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|+.||+++.... .......++ +.+++
T Consensus 157 ktvGIIGlG~IG~~vA~~l~~~G~~V~~yd~~~~~~~----------------------------~~~~~~~sl~ell~~ 208 (416)
T 3k5p_A 157 KTLGIVGYGNIGSQVGNLAESLGMTVRYYDTSDKLQY----------------------------GNVKPAASLDELLKT 208 (416)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCCCCB----------------------------TTBEECSSHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCcchhcc----------------------------cCcEecCCHHHHHhh
Confidence 6899999999999999999999999999998743100 011122344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~ 436 (724)
||+|+.++|...+.+.-+-++....++++++|+..+.+-. ...+.+.+.
T Consensus 209 aDvV~lhvPlt~~T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~ 259 (416)
T 3k5p_A 209 SDVVSLHVPSSKSTSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQ 259 (416)
T ss_dssp CSEEEECCCC-----CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHH
Confidence 9999999997776554444566677899998875444433 345555553
No 233
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=98.17 E-value=4.9e-06 Score=91.37 Aligned_cols=123 Identities=20% Similarity=0.241 Sum_probs=78.7
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC-----CCcEEEEeCCH--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 309 RKVAVIGGGLM-GSGIATAHILN-----NIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~la~~-----G~~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
.||+|||+|.+ |.+++..|+.. +.+|++||+++ ++++.... +...+.. ..+ ...++..++
T Consensus 8 ~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~-~~~~~~~--~~~---------~~~~i~~t~ 75 (450)
T 1s6y_A 8 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGA-LAKRMVE--KAG---------VPIEIHLTL 75 (450)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHH-HHHHHHH--HTT---------CCCEEEEES
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHH-HHHHHHh--hcC---------CCcEEEEeC
Confidence 58999999999 77888888874 66899999999 88776432 2221110 111 013566678
Q ss_pred Cc-cCcCCCCEEEEcccCCh----------------------------------HHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 381 DY-SEFKDVDMVIEAVIESV----------------------------------PLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 381 ~~-~~~~~aDlVIeav~e~~----------------------------------~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
|+ +++++||+||.+++-.. .+.+++.+++.++++ +++++..|..
T Consensus 76 D~~eal~gAD~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P-~a~ii~~tNP 154 (450)
T 1s6y_A 76 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCP-DAWLINFTNP 154 (450)
T ss_dssp CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEECSSS
T ss_pred CHHHHhCCCCEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCC-CeEEEEeCCc
Confidence 87 78999999999997311 346677788888874 5555533333
Q ss_pred CCH-HHHhcccCCCCCEEEE
Q 004918 426 IDL-NIVGEKTSSQDRIIGA 444 (724)
Q Consensus 426 ~~~-~~~~~~~~~~~r~ig~ 444 (724)
..+ ++.........|++|+
T Consensus 155 vdivT~a~~k~~p~~rViG~ 174 (450)
T 1s6y_A 155 AGMVTEAVLRYTKQEKVVGL 174 (450)
T ss_dssp HHHHHHHHHHHCCCCCEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEe
Confidence 222 2332222333477764
No 234
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=98.15 E-value=5.7e-06 Score=86.98 Aligned_cols=109 Identities=20% Similarity=0.269 Sum_probs=71.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
..||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+.+.. ...... -.+.. ++++++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~-~~~~~~-----------~~v~~-~~~~a~ 72 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHAT-PYSPTT-----------VRVKA-GEYSDC 72 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHG-GGSSSC-----------CEEEE-CCGGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhh-hhcCCC-----------eEEEe-CCHHHh
Confidence 3599999999999999999998885 89999999887764333332221 110000 12332 456889
Q ss_pred CCCCEEEEcccC--Ch------------HHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 386 KDVDMVIEAVIE--SV------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 386 ~~aDlVIeav~e--~~------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
++||+||.+++- ++ .+.+++.+.+.+++ ++++++.. +.|+..+.
T Consensus 73 ~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~t 130 (317)
T 3d0o_A 73 HDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVA--TNPVDILA 130 (317)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEEC--SSSHHHHH
T ss_pred CCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHH
Confidence 999999999843 21 45566667788875 55555442 34554333
No 235
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=98.14 E-value=1.6e-06 Score=90.90 Aligned_cols=125 Identities=16% Similarity=0.094 Sum_probs=80.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
-++|+|||+|.||.++|..+...|++|++||++++... +. ..++ +.++
T Consensus 144 g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~------------------------------~~-~~~l~ell~ 192 (311)
T 2cuk_A 144 GLTLGLVGMGRIGQAVAKRALAFGMRVVYHARTPKPLP------------------------------YP-FLSLEELLK 192 (311)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSS------------------------------SC-BCCHHHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCcccc------------------------------cc-cCCHHHHHh
Confidence 36899999999999999999999999999999875311 11 1233 4568
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccCCCCCEEEEecCC--C------CCCCCee
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTSSQDRIIGAHFFS--P------AHVMPLL 456 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~~~~r~ig~h~~~--p------~~~~~lv 456 (724)
+||+|+.++|.+.+...-+-++..+.++++++++..+++-.+ ..+.+.+...-.-.++..|. | .+..+.+
T Consensus 193 ~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~g~i~ga~lDv~~~eP~~~~~~L~~~~nv 272 (311)
T 2cuk_A 193 EADVVSLHTPLTPETHRLLNRERLFAMKRGAILLNTARGALVDTEALVEALRGHLFGAGLDVTDPEPLPPGHPLYALPNA 272 (311)
T ss_dssp HCSEEEECCCCCTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCHHHHHHHHTTTSSEEEESSCSSSSCCTTSGGGGCTTE
T ss_pred hCCEEEEeCCCChHHHhhcCHHHHhhCCCCcEEEECCCCCccCHHHHHHHHhCcCCEEEEeeCCCCCCCCCChhhhCCCE
Confidence 899999999976554332223455678999988755544333 24555554222223444443 3 2233446
Q ss_pred eEecCCC
Q 004918 457 EIVRTER 463 (724)
Q Consensus 457 eii~~~~ 463 (724)
.++|+..
T Consensus 273 iltPh~~ 279 (311)
T 2cuk_A 273 VITPHIG 279 (311)
T ss_dssp EECCSCT
T ss_pred EECCcCC
Confidence 6666543
No 236
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=98.13 E-value=2.9e-06 Score=89.21 Aligned_cols=97 Identities=22% Similarity=0.208 Sum_probs=66.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc-ccCccCc
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~~ 385 (724)
.||+|||+|.+|.+++..++..++ +++++|+++++++.....+.+.. . ....+.. ..+++++
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~v~~~~~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ----A-----------FTAPKKIYSGEYSDC 70 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG----G-----------GSCCCEEEECCGGGG
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH----H-----------hcCCeEEEECCHHHh
Confidence 589999999999999999999887 89999999988775333332211 0 0012222 2456889
Q ss_pred CCCCEEEEcccCC--h------------HHHHHHHHHHHhhCCCCcEEEe
Q 004918 386 KDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 386 ~~aDlVIeav~e~--~------------~~k~~v~~~l~~~~~~~~ii~s 421 (724)
++||+||.+++-. + .+.+++.+.+.+++ |+++++.
T Consensus 71 ~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 119 (318)
T 1ez4_A 71 KDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLV 119 (318)
T ss_dssp TTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEE
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 9999999998421 1 45566667788876 5555543
No 237
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=98.13 E-value=1.2e-06 Score=94.87 Aligned_cols=100 Identities=16% Similarity=0.195 Sum_probs=70.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||+.+|..+...|++|+.||++++.. .+ .+....++ +.++.
T Consensus 146 ktlGiIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~----------------~~------------~~~~~~~l~ell~~ 197 (404)
T 1sc6_A 146 KKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLP----------------LG------------NATQVQHLSDLLNM 197 (404)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCC----------------CT------------TCEECSCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEEcCCchhc----------------cC------------CceecCCHHHHHhc
Confidence 589999999999999999999999999999975420 01 11223344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~ 436 (724)
||+|+.++|...+.+.-+-++..+.++++++|+..+.+-.+ ..+.+.+.
T Consensus 198 aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~ 248 (404)
T 1sc6_A 198 SDVVSLHVPENPSTKNMMGAKEISLMKPGSLLINASRGTVVDIPALADALA 248 (404)
T ss_dssp CSEEEECCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHH
T ss_pred CCEEEEccCCChHHHHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHH
Confidence 99999999987765544335566778999988754444333 34455443
No 238
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.13 E-value=1.8e-06 Score=90.86 Aligned_cols=119 Identities=23% Similarity=0.328 Sum_probs=72.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCC-CCHHHHHHhhcCcccccCccC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGK-LTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~-~~~~~~~~~~~~i~~~~~~~~ 384 (724)
..||+|||+|.+|.+++..++..|+ +|+++|+++++++.....+. ... +. ..-++.. +++++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~--------~~~~~~------~~~~i~~-~~~~a 71 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDIN--------HGLPFM------GQMSLYA-GDYSD 71 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHT--------TSCCCT------TCEEEC---CGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHH--------HhHHhc------CCeEEEE-CCHHH
Confidence 3589999999999999999999998 99999999877653221111 110 00 0012332 46788
Q ss_pred cCCCCEEEEcccCCh--------------HHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhccc----C-CCCCEEEE
Q 004918 385 FKDVDMVIEAVIESV--------------PLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT----S-SQDRIIGA 444 (724)
Q Consensus 385 ~~~aDlVIeav~e~~--------------~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~----~-~~~r~ig~ 444 (724)
+++||+||.+++-.. .+.+++.+.+.+++ ++++++.. +.|+..+.... . .+.|++|+
T Consensus 72 ~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~--tNPv~~~~~~~~k~s~~p~~rviG~ 147 (318)
T 1y6j_A 72 VKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVV--SNPVDIITYMIQKWSGLPVGKVIGS 147 (318)
T ss_dssp GTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEEC--SSSHHHHHHHHHHHHTCCTTTEEEC
T ss_pred hCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEe--cCcHHHHHHHHHHHcCCCHHHEecc
Confidence 999999999986322 23466677788886 55555442 44554333222 2 34566664
No 239
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=98.12 E-value=1.5e-06 Score=93.50 Aligned_cols=104 Identities=10% Similarity=-0.026 Sum_probs=71.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|++||++++..+... +.| +....++ +.++.
T Consensus 192 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-----------~~G-------------~~~~~~l~ell~~ 247 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-----------ELN-------------LTWHATREDMYPV 247 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-----------HHT-------------CEECSSHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-----------hcC-------------ceecCCHHHHHhc
Confidence 5899999999999999999999999999999864432211 011 1112233 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~~ 436 (724)
||+|+.++|-+.+...-+-++..+.++++++|+..+.+-.+ ..+.+.+.
T Consensus 248 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~ 298 (393)
T 2nac_A 248 CDVVTLNCPLHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALE 298 (393)
T ss_dssp CSEEEECSCCCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHH
Confidence 99999999976655332224566778999988755544333 34555553
No 240
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=98.11 E-value=3.3e-06 Score=88.47 Aligned_cols=98 Identities=19% Similarity=0.235 Sum_probs=67.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~ 386 (724)
+||+|||+|.+|.+++..++..+ .+|+++|+++++++.....+.+.. ... . .-++.. +++++++
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~----~~~--~-------~~~v~~-~~~~a~~ 66 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT----PFA--H-------PVWVWA-GSYGDLE 66 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG----GGS--C-------CCEEEE-CCGGGGT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH----hhc--C-------CeEEEE-CCHHHhC
Confidence 48999999999999999999987 589999999887765332222111 000 0 012332 4678899
Q ss_pred CCCEEEEcccC--C------------hHHHHHHHHHHHhhCCCCcEEEe
Q 004918 387 DVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 387 ~aDlVIeav~e--~------------~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
+||+||.+++- + ..+.+++.+.+.++++ +++++.
T Consensus 67 ~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~iiv 114 (310)
T 2xxj_A 67 GARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAP-EAVLLV 114 (310)
T ss_dssp TEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEE
T ss_pred CCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCC-CcEEEE
Confidence 99999998742 2 4456677777888865 455543
No 241
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=98.11 E-value=1.1e-06 Score=92.32 Aligned_cols=127 Identities=14% Similarity=0.096 Sum_probs=81.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|+.||++++..+.. .......++ +.+++
T Consensus 141 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 194 (324)
T 3hg7_A 141 RTLLILGTGSIGQHIAHTGKHFGMKVLGVSRSGRERAGF--------------------------DQVYQLPALNKMLAQ 194 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCTTC--------------------------SEEECGGGHHHHHHT
T ss_pred ceEEEEEECHHHHHHHHHHHhCCCEEEEEcCChHHhhhh--------------------------hcccccCCHHHHHhh
Confidence 689999999999999999999999999999987431110 001112233 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccC-CCCCEEEEecC--------CCCCCCCee
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS-SQDRIIGAHFF--------SPAHVMPLL 456 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~-~~~r~ig~h~~--------~p~~~~~lv 456 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+-. ...+...+. ..-...++-.| +|.+..+-+
T Consensus 195 aDvV~l~lPlt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nv 274 (324)
T 3hg7_A 195 ADVIVSVLPATRETHHLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNL 274 (324)
T ss_dssp CSEEEECCCCCSSSTTSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTE
T ss_pred CCEEEEeCCCCHHHHHHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCE
Confidence 9999999997665544444455667899998875444433 334555543 22233444433 223344556
Q ss_pred eEecC
Q 004918 457 EIVRT 461 (724)
Q Consensus 457 eii~~ 461 (724)
.++|+
T Consensus 275 ilTPH 279 (324)
T 3hg7_A 275 IITPH 279 (324)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 67764
No 242
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=98.10 E-value=3.5e-06 Score=88.87 Aligned_cols=98 Identities=19% Similarity=0.230 Sum_probs=67.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCC--cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc-ccCccC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNI--YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-VLDYSE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~ 384 (724)
-.||+|||+|.+|.+++..++..++ +|+++|+++++++.....+.+.. . ....+.. ..++++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----~-----------~~~~~~i~~~~~~a 73 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----P-----------FTSPKKIYSAEYSD 73 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----G-----------GSCCCEEEECCGGG
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----H-----------hcCCeEEEECCHHH
Confidence 3699999999999999999998887 89999999987765333222211 0 0112222 246688
Q ss_pred cCCCCEEEEcccCC--h------------HHHHHHHHHHHhhCCCCcEEEe
Q 004918 385 FKDVDMVIEAVIES--V------------PLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 385 ~~~aDlVIeav~e~--~------------~~k~~v~~~l~~~~~~~~ii~s 421 (724)
+++||+||.+++-. + .+.+++.+.+.+++ |+++|+.
T Consensus 74 ~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 123 (326)
T 2zqz_A 74 AKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLV 123 (326)
T ss_dssp GGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHT-CCSEEEE
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEE
Confidence 99999999998422 1 45566667788886 4555543
No 243
>1tg6_A Putative ATP-dependent CLP protease proteolytic S; mitochondrial CLPP, CLP/HSP 100, ATP-dependent protease, HYD; HET: FME; 2.10A {Homo sapiens} SCOP: c.14.1.1
Probab=98.09 E-value=7.9e-06 Score=82.93 Aligned_cols=134 Identities=16% Similarity=0.214 Sum_probs=94.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.++..+.+.+.+.|..++.++..+.|+| .+-|+ ++. ....++ +.|..+++||++.
T Consensus 90 ~I~d~~a~~iiaqL~~l~~ed~~k~I~L~INSPGG------sV~----------------ag~aIy-d~I~~~k~pV~t~ 146 (277)
T 1tg6_A 90 PIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGG------VVT----------------AGLAIY-DTMQYILNPICTW 146 (277)
T ss_dssp SBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECCB------CHH----------------HHHHHH-HHHHHSCSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCCC------CHH----------------HHHHHH-HHHHhcCCCEEEE
Confidence 4888899999999988876555676666 34332 221 122445 6688889999999
Q ss_pred ECccccchhHHHHhhcCE--EEEeCCceeeCcccccCccCCcch-hhh-----------------hccc--ccHHHHHHH
Q 004918 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGG-TQR-----------------LPRL--VGLSKAIEM 162 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~G~~P~~g~-~~~-----------------l~r~--~G~~~a~~l 162 (724)
+.|.|..+|.-|+++||. |+|.++++++.....-|. .|- +.. +.+. .......++
T Consensus 147 v~G~AASaG~~Ia~Agd~gkr~a~P~S~ImihqP~~g~---~G~a~Di~~~a~ei~~~~~~~~~i~a~~tG~~~e~i~~~ 223 (277)
T 1tg6_A 147 CVGQAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGA---RGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESA 223 (277)
T ss_dssp EEEEEETHHHHHHHTSCTTCEEECTTCEEEECCCCCCC---CSSHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EccEeHHHHHHHHHCCCcCCEEEecCCEEEEecccccc---cCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHH
Confidence 999999999999999999 999999998876543222 111 000 0111 123455556
Q ss_pred HHcCCCCCHHHHHHCCCcceecCc
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTS 186 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~ 186 (724)
+-.+..++++||+++||||+|...
T Consensus 224 ~drd~~lta~EAle~GLID~I~~~ 247 (277)
T 1tg6_A 224 MERDRYMSPMEAQEFGILDKVLVH 247 (277)
T ss_dssp HSSCEEECHHHHHHHTSCSEECSS
T ss_pred HhcCcccCHHHHHHCCCCCEecCc
Confidence 656678899999999999999854
No 244
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=98.09 E-value=5.5e-06 Score=88.27 Aligned_cols=137 Identities=8% Similarity=0.048 Sum_probs=84.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|++|+.||++... +.+ .+.| +. ..++ +.++.
T Consensus 177 ktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-----------~~~g-------------~~-~~~l~ell~~ 230 (365)
T 4hy3_A 177 SEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-----------EENG-------------VE-PASLEDVLTK 230 (365)
T ss_dssp SEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-----------HHTT-------------CE-ECCHHHHHHS
T ss_pred CEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-----------hhcC-------------ee-eCCHHHHHhc
Confidence 68999999999999999999999999999998533 111 0111 11 1234 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccCCCCCEEEEecC--CC------CCCCCeee
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTSSQDRIIGAHFF--SP------AHVMPLLE 457 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~~~~r~ig~h~~--~p------~~~~~lve 457 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ +....+.+.+....-..++--| .| .+..+-|.
T Consensus 231 aDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~aaLDV~~~EPl~~~~pL~~~~nvi 310 (365)
T 4hy3_A 231 SDFIFVVAAVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIVAASDVYPEEPLPLDHPVRSLKGFI 310 (365)
T ss_dssp CSEEEECSCSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSEEEESCCSSSSCCTTCGGGTCTTEE
T ss_pred CCEEEEcCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCceEEeeCCCCCCCCCCChhhcCCCEE
Confidence 99999999977776655556677889999988744433 3334555554422111344333 22 23344566
Q ss_pred EecCCC-CCHHHHHH
Q 004918 458 IVRTER-TSAQVILD 471 (724)
Q Consensus 458 ii~~~~-t~~e~~~~ 471 (724)
+.|+-. .+.++.+.
T Consensus 311 lTPHia~~t~e~~~~ 325 (365)
T 4hy3_A 311 RSAHRAGALDSAFKK 325 (365)
T ss_dssp ECCSCSSCCHHHHHH
T ss_pred ECCccccCHHHHHHH
Confidence 777432 24444433
No 245
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=98.09 E-value=1.1e-06 Score=92.97 Aligned_cols=101 Identities=16% Similarity=0.082 Sum_probs=72.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|+.||+++...+.. .+ ....+++ +.+++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-------------~g-------------~~~~~~l~ell~~ 227 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE-------------EG-------------AIYHDTLDSLLGA 227 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-------------TT-------------CEECSSHHHHHHT
T ss_pred CEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh-------------cC-------------CeEeCCHHHHHhh
Confidence 689999999999999999999999999999986432211 01 1223344 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhccc
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~ 435 (724)
||+|+.++|-+.+...-+-++..+.++++++|+..+.+ .....+.+.+
T Consensus 228 sDvV~l~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL 277 (345)
T 4g2n_A 228 SDIFLIAAPGRPELKGFLDHDRIAKIPEGAVVINISRGDLINDDALIEAL 277 (345)
T ss_dssp CSEEEECSCCCGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 99999999977766544445667778999988754433 3334455544
No 246
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=98.07 E-value=1.6e-06 Score=91.56 Aligned_cols=101 Identities=9% Similarity=0.013 Sum_probs=70.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|++|++||++++.. .+. +.| +.. .++ +.+++
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-----------~~g-------------~~~-~~l~ell~~ 219 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VSA-----------SFG-------------VQQ-LPLEEIWPL 219 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hhh-----------hcC-------------cee-CCHHHHHhc
Confidence 689999999999999999999999999999987642 111 111 111 133 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH--HHhccc
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN--IVGEKT 435 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~--~~~~~~ 435 (724)
||+|+.++|.+.+...-+-++..+.++++++|+..+++-.+. .+...+
T Consensus 220 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL 269 (335)
T 2g76_A 220 CDFITVHTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGGIVDEGALLRAL 269 (335)
T ss_dssp CSEEEECCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHhhCHHHHhhCCCCcEEEECCCccccCHHHHHHHH
Confidence 999999999776654433355667889999887555544333 444444
No 247
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.07 E-value=1.7e-05 Score=72.62 Aligned_cols=106 Identities=14% Similarity=0.047 Sum_probs=66.5
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCC-HHHHHHhhcCcccccCccCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~~ 385 (724)
++++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+.+.. ...-.+-.+ ++.... ..+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~-----~~~~~gd~~~~~~l~~-----------~~~ 68 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEG-----FDAVIADPTDESFYRS-----------LDL 68 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTT-----CEEEECCTTCHHHHHH-----------SCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC-----CcEEECCCCCHHHHHh-----------CCc
Confidence 357899999999999999999999999999999999877643210 000011111 110000 135
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
.++|+||.+++ +.+....+...+.+.. ...+++...+......
T Consensus 69 ~~~d~vi~~~~-~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~ 111 (141)
T 3llv_A 69 EGVSAVLITGS-DDEFNLKILKALRSVS-DVYAIVRVSSPKKKEE 111 (141)
T ss_dssp TTCSEEEECCS-CHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHH
T ss_pred ccCCEEEEecC-CHHHHHHHHHHHHHhC-CceEEEEEcChhHHHH
Confidence 78999999998 4444444445555554 5556665554443333
No 248
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=98.05 E-value=1.2e-06 Score=92.59 Aligned_cols=101 Identities=19% Similarity=0.148 Sum_probs=72.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.++|..+...|++|+.||++++.... +.| +... ++ +.+++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-------------~~g-------------~~~~-~l~ell~~ 194 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CVYT-SLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CEEC-CHHHHHHH
T ss_pred ceEEEECcCHHHHHHHHHHHHCcCEEEEECCCcchhhH-------------hcC-------------ceec-CHHHHHhh
Confidence 68999999999999999999999999999999765321 011 1111 23 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~ 436 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ .....+...+.
T Consensus 195 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~ 245 (334)
T 2pi1_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 99999999976666555556667788999988744433 33345555553
No 249
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=98.02 E-value=1.9e-06 Score=90.92 Aligned_cols=102 Identities=18% Similarity=0.140 Sum_probs=71.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|++|+.||+++...+...+ .| +... ++ +.++.
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~-----------~g-------------~~~~-~l~ell~~ 200 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTEQR-----------LG-------------LRQV-ACSELFAS 200 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHH-----------HT-------------EEEC-CHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHh-----------cC-------------ceeC-CHHHHHhh
Confidence 68999999999999999999999999999998743222110 01 1112 33 45788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC--CHHHHhccc
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKT 435 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~ 435 (724)
||+|+.++|-+.+...-+-++..+.++++++|+..+.+- ....+.+.+
T Consensus 201 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 250 (330)
T 4e5n_A 201 SDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAAL 250 (330)
T ss_dssp CSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHH
Confidence 999999999766655545566778889999887544443 333454444
No 250
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=98.02 E-value=7.6e-07 Score=93.28 Aligned_cols=101 Identities=12% Similarity=0.072 Sum_probs=71.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|++||++++..+.. .......++ +.+++
T Consensus 140 ~tvGIiG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--------------------------~~~~~~~~l~ell~~ 193 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESLQAWGFPLRCWSRSRKSWPGV--------------------------ESYVGREELRAFLNQ 193 (315)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEEESSCCCCTTC--------------------------EEEESHHHHHHHHHT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEcCCchhhhhh--------------------------hhhcccCCHHHHHhh
Confidence 689999999999999999999999999999987642110 000001223 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhccc
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKT 435 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~ 435 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ .....+.+.+
T Consensus 194 aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL 243 (315)
T 3pp8_A 194 TRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAAL 243 (315)
T ss_dssp CSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHH
T ss_pred CCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHH
Confidence 99999999977766544446677788999988654443 3334455554
No 251
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=97.99 E-value=5.8e-06 Score=86.80 Aligned_cols=89 Identities=11% Similarity=0.119 Sum_probs=63.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
++|+|||+|.||..++..|++. |+ +|++|||+++++++..+.+ + ..+...+++ +.+
T Consensus 136 ~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~~~l~~~~----------~-----------~~~~~~~~~~e~v 194 (312)
T 2i99_A 136 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV----------Q-----------GEVRVCSSVQEAV 194 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHHHHHHHHS----------S-----------SCCEECSSHHHHH
T ss_pred cEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHh----------h-----------CCeEEeCCHHHHH
Confidence 5899999999999999999876 76 8999999999877643211 1 013334455 567
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
++||+||.|+|.. ..++.. +.++++++|++.++
T Consensus 195 ~~aDiVi~atp~~----~~v~~~--~~l~~g~~vi~~g~ 227 (312)
T 2i99_A 195 AGADVIITVTLAT----EPILFG--EWVKPGAHINAVGA 227 (312)
T ss_dssp TTCSEEEECCCCS----SCCBCG--GGSCTTCEEEECCC
T ss_pred hcCCEEEEEeCCC----CcccCH--HHcCCCcEEEeCCC
Confidence 8999999999853 233322 46788888876433
No 252
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=97.98 E-value=2.9e-06 Score=89.87 Aligned_cols=101 Identities=14% Similarity=0.021 Sum_probs=70.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|++||++++.. . . . . +...+++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~---~----~-----------------~~~~~~l~ell~~ 199 (333)
T 1j4a_A 147 QVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-E---K----K-----------------GYYVDSLDDLYKQ 199 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-H---H----T-----------------TCBCSCHHHHHHH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-H---h----h-----------------CeecCCHHHHHhh
Confidence 689999999999999999999999999999987653 1 0 0 0 1112233 45678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC--CHHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~ 436 (724)
||+|+.++|...+...-+-++..+.+++++++++.+.+- ....+.+.+.
T Consensus 200 aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~ 250 (333)
T 1j4a_A 200 ADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLD 250 (333)
T ss_dssp CSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 999999999776644323244556788999887555443 3345555543
No 253
>3p2l_A ATP-dependent CLP protease proteolytic subunit; structural genomics, center for structural genomics of infec diseases, csgid; 2.29A {Francisella tularensis subsp} SCOP: c.14.1.1
Probab=97.98 E-value=7e-06 Score=79.87 Aligned_cols=134 Identities=19% Similarity=0.181 Sum_probs=94.3
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKAIVL--TGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~vVl--~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.+++.+.+.+.+.|..++.++..+.|+| .+-| +++. ....++ +.|..+++|+++.
T Consensus 38 ~I~~~~a~~i~~~L~~l~~~~~~~~I~l~INSpG------G~v~----------------~~~~I~-~~i~~~~~~v~t~ 94 (201)
T 3p2l_A 38 EVNDHSANLVIAQLLFLESEDPDKDIYFYINSPG------GMVT----------------AGMGVY-DTMQFIKPDVSTI 94 (201)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSSSCEEEEEEECC------BCHH----------------HHHHHH-HHHHHSSSCEEEE
T ss_pred EECHHHHHHHHHHHHHHHhcCCCCCEEEEEECCC------CCHH----------------HHHHHH-HHHHHhCCCeEEE
Confidence 4889999999999999987666666665 3333 2221 122445 6688899999999
Q ss_pred ECccccchhHHHHhhcCE--EEEeCCceeeCcccccCccCCcchhh----------hh--------ccc--ccHHHHHHH
Q 004918 105 VEGLALGGGLELAMGCHA--RIAAPKTQLGLPELTLGVIPGFGGTQ----------RL--------PRL--VGLSKAIEM 162 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~--ria~~~a~f~~pe~~~G~~P~~g~~~----------~l--------~r~--~G~~~a~~l 162 (724)
+.|.|..+|.-++++||. |++.+++++......-|. .|-.. .+ .+. .......++
T Consensus 95 ~~G~AaS~g~~i~~ag~~g~r~~~p~a~imiH~p~~~~---~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~e~i~~~ 171 (201)
T 3p2l_A 95 CIGLAASMGSLLLAGGAKGKRYSLPSSQIMIHQPLGGF---RGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKD 171 (201)
T ss_dssp EEEEEETHHHHHHHTSSTTCEEECTTCEEEECCCEEEE---EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
T ss_pred EcCEehhHHHHHHHcCccCCEEEcCCCeEEEecccccc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 999999999999999998 999999998776654221 11110 00 111 123444455
Q ss_pred HHcCCCCCHHHHHHCCCcceecCc
Q 004918 163 MLLSKSITSEEGWKLGLIDAVVTS 186 (724)
Q Consensus 163 ~ltg~~i~a~eA~~~Glv~~vv~~ 186 (724)
+-....++|+||++.||||+|++.
T Consensus 172 ~~~~~~lta~EA~e~GliD~I~~~ 195 (201)
T 3p2l_A 172 TDRDNFMMADEAKAYGLIDHVIES 195 (201)
T ss_dssp TSSCEEEEHHHHHHHTSCSEECCC
T ss_pred hhcCeeecHHHHHHcCCccEecCC
Confidence 555566799999999999999854
No 254
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=97.97 E-value=1.9e-06 Score=92.31 Aligned_cols=104 Identities=15% Similarity=0.066 Sum_probs=71.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
++|+|||+|.||..+|..+...|++ |++||+++...+... +.| +....++ +.++
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-----------~~g-------------~~~~~~l~ell~ 220 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-----------KVG-------------ARRVENIEELVA 220 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-----------HTT-------------EEECSSHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-----------hcC-------------cEecCCHHHHHh
Confidence 5899999999999999999999997 999999875433211 111 1122344 4578
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC--CHHHHhcccC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~ 436 (724)
+||+|+.++|...+...-+-++..+.++++++|++.+.+- ....+.+.+.
T Consensus 221 ~aDvV~l~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~ 272 (364)
T 2j6i_A 221 QADIVTVNAPLHAGTKGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALE 272 (364)
T ss_dssp TCSEEEECCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred cCCEEEECCCCChHHHHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHH
Confidence 9999999999766554433345667789999887544442 3334555443
No 255
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=97.96 E-value=2.3e-06 Score=90.94 Aligned_cols=102 Identities=14% Similarity=0.036 Sum_probs=69.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|++||++++.... . ..| +....++ +.++.
T Consensus 169 ~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~-~-----------~~g-------------~~~~~~l~ell~~ 223 (347)
T 1mx3_A 169 ETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE-R-----------ALG-------------LQRVSTLQDLLFH 223 (347)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH-H-----------HHT-------------CEECSSHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchhhH-h-----------hcC-------------CeecCCHHHHHhc
Confidence 58999999999999999999999999999997653110 0 001 1112233 45788
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH--HHHhccc
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL--NIVGEKT 435 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~--~~~~~~~ 435 (724)
||+|+.++|.+.+...-+-++..+.++++++|+..+++-.+ ..+.+.+
T Consensus 224 aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL 273 (347)
T 1mx3_A 224 SDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQAL 273 (347)
T ss_dssp CSEEEECCCCCTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHH
Confidence 99999999976554433335566778999988755554333 3455444
No 256
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=97.96 E-value=1.3e-06 Score=92.51 Aligned_cols=110 Identities=17% Similarity=0.112 Sum_probs=74.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|++|+.||++++.. .+. ..... ++ +.+++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~--------------~~~-------------~~~~~-~l~ell~~ 200 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFSAMGAKVIAYDVAYNPE--------------FEP-------------FLTYT-DFDTVLKE 200 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCGG--------------GTT-------------TCEEC-CHHHHHHH
T ss_pred CeEEEEecCHHHHHHHHHHhhCCCEEEEECCChhhh--------------hhc-------------ccccc-CHHHHHhc
Confidence 689999999999999999999999999999987530 000 01112 34 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccC-CCCCEEEEec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS-SQDRIIGAHF 446 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~-~~~r~ig~h~ 446 (724)
||+|+.++|-..+...-+-++..+.++++++|+..+.+ .....+.+.+. ..-...++--
T Consensus 201 aDvV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV 262 (343)
T 2yq5_A 201 ADIVSLHTPLFPSTENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDT 262 (343)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESC
T ss_pred CCEEEEcCCCCHHHHHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecc
Confidence 99999999976665544445666778999988754443 33344555443 2223345443
No 257
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.95 E-value=5.5e-05 Score=68.68 Aligned_cols=96 Identities=20% Similarity=0.213 Sum_probs=60.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCC-CHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
++|.|+|+|.||..++..|.+.|++|+++|++++.++...+.. ....-.+.. +.... ....+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l-----------~~~~~~~ 69 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTL-----------EDAGIED 69 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHH-----------HHTTTTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHH-----------HHcCccc
Confidence 4899999999999999999999999999999998766532110 000000101 00000 0023678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
+|+||.+++.+ .. ...+..+.+.++++.+++.
T Consensus 70 ~d~vi~~~~~~-~~-~~~~~~~~~~~~~~~ii~~ 101 (140)
T 1lss_A 70 ADMYIAVTGKE-EV-NLMSSLLAKSYGINKTIAR 101 (140)
T ss_dssp CSEEEECCSCH-HH-HHHHHHHHHHTTCCCEEEE
T ss_pred CCEEEEeeCCc-hH-HHHHHHHHHHcCCCEEEEE
Confidence 99999999854 22 2333444455666677654
No 258
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.86 E-value=4.5e-06 Score=77.00 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=52.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..++..|...|++|+++|+++++++...+.+ + ..+...++. +.+++
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~----------~-----------~~~~~~~~~~~~~~~ 80 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY----------E-----------YEYVLINDIDSLIKN 80 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH----------T-----------CEEEECSCHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh----------C-----------CceEeecCHHHHhcC
Confidence 5899999999999999999999999999999999876643211 0 011123333 45688
Q ss_pred CCEEEEcccCC
Q 004918 388 VDMVIEAVIES 398 (724)
Q Consensus 388 aDlVIeav~e~ 398 (724)
+|+||.|+|..
T Consensus 81 ~Divi~at~~~ 91 (144)
T 3oj0_A 81 NDVIITATSSK 91 (144)
T ss_dssp CSEEEECSCCS
T ss_pred CCEEEEeCCCC
Confidence 99999999854
No 259
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=97.84 E-value=9.5e-05 Score=83.02 Aligned_cols=159 Identities=14% Similarity=0.046 Sum_probs=105.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.-++.+...+.+..+++.+... .+-+|.|.- |.|+.+.+-...... ...+.+.. ..+ ..+....+|+|++
T Consensus 118 gGs~g~~~~~Ki~r~~e~A~~~-~lPvI~l~d-----SgGArlqe~~~~l~~--~~~~g~i~-~~~-~~ls~~giP~Isv 187 (587)
T 1pix_A 118 AGAWVPGQAECLLRASDTAKTL-HVPLVYVLN-----CSGVKFDEQEKVYPN--RRGGGTPF-FRN-AELNQLGIPVIVG 187 (587)
T ss_dssp TTEECTTHHHHHHHHHHHHHHH-TCCEEEEEC-----CCEECGGGHHHHSSS--TTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEe-----CCCCCccccchhccc--cccHHHHH-HHH-HHHhCCCCCEEEE
Confidence 3688889999999999988765 455666654 456666543221110 01122222 223 3467788999999
Q ss_pred ECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHHHHHHH-HcCCCCCHHH-------HH
Q 004918 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMM-LLSKSITSEE-------GW 175 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~-ltg~~i~a~e-------A~ 175 (724)
|.|.|.|||... ..||++|+++. +.+++.-.. ++- ...-.-.++..+|.+++ .+|+.+++++ +.
T Consensus 188 v~G~~~GGga~~-a~~d~vim~e~~a~i~~~GP~--vi~----~~~~~~~~d~~~A~el~~~tge~v~~e~lgga~~h~~ 260 (587)
T 1pix_A 188 IYGTNPAGGGYH-SISPTVIIAHEKANMAVGGAG--IMG----GMNPKGHVDLEYANEIADMVDRTGKTEPPGAVDIHYT 260 (587)
T ss_dssp ECSEEETHHHHH-HHSSSEEEEETTCEEESCCCT--TCC----SCCSSSSCCHHHHHHHHHHHHTTCCCCCSSBHHHHTT
T ss_pred EecCCcHHHHHH-HhcCceEEecCCcEEEecCHH--HHh----hhccccccchhHHHHHHHHhCCccChhhcccHHHHHh
Confidence 999999999999 99999999864 888762110 000 00001127899999999 9999988665 23
Q ss_pred HCCCcceecCcchHHHHHHHHHHHHHcc
Q 004918 176 KLGLIDAVVTSEELLKVSRLWALDIAAR 203 (724)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (724)
+.|++|.+++.++ .+.+.++++...
T Consensus 261 ~~GvvD~vv~~e~---~a~~~~r~~ls~ 285 (587)
T 1pix_A 261 ETGFMREVYASEE---GVLEGIKKYVGM 285 (587)
T ss_dssp TSCCSCEEESSHH---HHHHHHHHHHHT
T ss_pred hcCceeEecCCHH---HHHHHHHHHHHh
Confidence 6999999998765 444555555444
No 260
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.83 E-value=4.3e-05 Score=67.15 Aligned_cols=40 Identities=20% Similarity=0.206 Sum_probs=36.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC-CcEEEEeCCHHHHHHH
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN-IYVVLKEVNSEYLLKG 347 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~ 347 (724)
+++|.|+|+|.||..++..|.+.| ++|+++|++++.++..
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 578999999999999999999999 9999999999876653
No 261
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=97.82 E-value=2.6e-06 Score=90.93 Aligned_cols=111 Identities=14% Similarity=0.047 Sum_probs=73.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||+++|..+...|++|++||++.+... .+ .. ..++ +.+++
T Consensus 120 ktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~---------------~~-------------~~-~~sl~ell~~ 170 (381)
T 3oet_A 120 RTIGIVGVGNVGSRLQTRLEALGIRTLLCDPPRAARG---------------DE-------------GD-FRTLDELVQE 170 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHTT---------------CC-------------SC-BCCHHHHHHH
T ss_pred CEEEEEeECHHHHHHHHHHHHCCCEEEEECCChHHhc---------------cC-------------cc-cCCHHHHHhh
Confidence 6899999999999999999999999999997543210 00 11 2334 55789
Q ss_pred CCEEEEcccCChH----HHHHHHHHHHhhCCCCcEEEecCCCC--CHHHHhcccCC-CCCEEEEecCC
Q 004918 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTSS-QDRIIGAHFFS 448 (724)
Q Consensus 388 aDlVIeav~e~~~----~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~~-~~r~ig~h~~~ 448 (724)
||+|+.++|-..+ ...-+-++..+.++++++|+..+.+- .-..+.+.+.. .-...++-.|.
T Consensus 171 aDiV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e 238 (381)
T 3oet_A 171 ADVLTFHTPLYKDGPYKTLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWE 238 (381)
T ss_dssp CSEEEECCCCCCSSTTCCTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCT
T ss_pred CCEEEEcCcCCccccccchhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccc
Confidence 9999999996655 43333345667789999886444333 33455555532 23344554443
No 262
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=97.79 E-value=3.7e-06 Score=88.93 Aligned_cols=100 Identities=13% Similarity=0.011 Sum_probs=70.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||..+|..+...|++|++||++++.. . + ..... .++ +.+++
T Consensus 146 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~-------------~~~~~-~~l~ell~~ 197 (333)
T 1dxy_A 146 QTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D------------H-------------PDFDY-VSLEDLFKQ 197 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C------------C-------------TTCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h------------H-------------hcccc-CCHHHHHhc
Confidence 689999999999999999999999999999987531 0 0 00111 133 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC--HHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID--LNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~--~~~~~~~~~ 436 (724)
||+|+.++|...+...-+-++..+.++++++++..+++-. ...+...+.
T Consensus 198 aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~ 248 (333)
T 1dxy_A 198 SDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLK 248 (333)
T ss_dssp CSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHH
T ss_pred CCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999997776554333556677899998875444433 345555554
No 263
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=97.76 E-value=4.2e-06 Score=89.52 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=67.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|++|++||++++.. ..+ .. ..++ +.+++
T Consensus 117 ~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~---------------~~g-------------~~-~~~l~ell~~ 167 (380)
T 2o4c_A 117 RTYGVVGAGQVGGRLVEVLRGLGWKVLVCDPPRQAR---------------EPD-------------GE-FVSLERLLAE 167 (380)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECHHHHHH---------------STT-------------SC-CCCHHHHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCChhhh---------------ccC-------------cc-cCCHHHHHHh
Confidence 589999999999999999999999999999765421 001 01 1233 45679
Q ss_pred CCEEEEcccCChH----HHHHHHHHHHhhCCCCcEEEecCCCC--CHHHHhcccC
Q 004918 388 VDMVIEAVIESVP----LKQKIFSELEKACPPHCILATNTSTI--DLNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~----~k~~v~~~l~~~~~~~~ii~s~ts~~--~~~~~~~~~~ 436 (724)
||+|+.++|-..+ ...-+-++..+.++++++|+..+.+- ....+.+.+.
T Consensus 168 aDvV~l~~Plt~~g~~~T~~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~ 222 (380)
T 2o4c_A 168 ADVISLHTPLNRDGEHPTRHLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLE 222 (380)
T ss_dssp CSEEEECCCCCSSSSSCCTTSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEeccCccccccchhhhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHH
Confidence 9999999996665 33322245667789999887444432 2334555553
No 264
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=97.71 E-value=7.3e-05 Score=77.97 Aligned_cols=119 Identities=18% Similarity=0.298 Sum_probs=72.3
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC--cEEEEeC--CHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 309 RKVAVIG-GGLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~la~~G~--~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
+||+|+| +|.+|.+++..|+..|+ +++++|+ ++++++.....+.+... ... .-.+.. ++++
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~----~~~---------~~~v~~-~~~~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA----YDS---------NTRVRQ-GGYE 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT----TTC---------CCEEEE-CCGG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh----hCC---------CcEEEe-CCHH
Confidence 3899999 99999999999999886 7999999 87765432222222111 000 011222 3568
Q ss_pred CcCCCCEEEEcccC--C------------hHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcc----cC-CCCCEEEE
Q 004918 384 EFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEK----TS-SQDRIIGA 444 (724)
Q Consensus 384 ~~~~aDlVIeav~e--~------------~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~----~~-~~~r~ig~ 444 (724)
++++||+||.+..- . ..+.+++.+.+.++.+ +.+|+.. +.|+..+... .. .+.|++|+
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p-~~~viv~--SNPv~~~~~~~~~~~~~p~~rviG~ 143 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHND-DYISLTT--SNPVDLLNRHLYEAGDRSREQVIGF 143 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCS-CCEEEEC--CSSHHHHHHHHHHHSSSCGGGEEEC
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEe--CChHHHHHHHHHHHcCCCHHHeeec
Confidence 89999999998732 1 1355666677777754 5555432 4444433322 22 34566664
No 265
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.71 E-value=0.0002 Score=65.53 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=37.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
++|.|+|+|.+|..+|..|.+.|++|+++|++++.++.+.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~ 47 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDELR 47 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 5799999999999999999999999999999999877643
No 266
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.70 E-value=0.00013 Score=69.87 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~ 347 (724)
++|.|+|+|.||..+|..|.+. |++|+++|++++.++.+
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~ 79 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH 79 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH
Confidence 4799999999999999999999 99999999999887654
No 267
>4gm2_A ATP-dependent CLP protease proteolytic subunit; structural genomics, structural genomics consortium, SGC, PR hydrolase; 2.80A {Plasmodium falciparum} PDB: 4hnk_A
Probab=97.69 E-value=0.00013 Score=70.78 Aligned_cols=142 Identities=14% Similarity=0.134 Sum_probs=93.7
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceE--EEEEcCCCC----ccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCc
Q 004918 27 ALAIPIVAGLKDKFEEATSRDDVKA--IVLTGNGGR----FSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKP 100 (724)
Q Consensus 27 al~~~~~~~l~~~l~~~~~d~~v~~--vVl~g~g~~----F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp 100 (724)
.++.++...+...|..++.++..+- +-|.+.|.. ...-+|+ .....++ +.|...+.|
T Consensus 36 ~I~d~~a~~iiaqLl~L~~ed~~k~I~lyINSpG~~~~~~~~~~G~v----------------~aglaIy-d~m~~~~~~ 98 (205)
T 4gm2_A 36 PIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLNGI----------------TDVISIV-DVINYISSD 98 (205)
T ss_dssp CCCHHHHHHHHHHHHHHHHHCTTCCEEEEEEECTTEETTEESCTTHH----------------HHHHHHH-HHHHHSSSC
T ss_pred EEcHHHHHHHHHHHHHHHhcCCCCCEEEEEeCCCCCCcCCCCCCCCH----------------HHHHHHH-HHHHhcCCC
Confidence 4899999999999998875433332 233444411 0000111 1233556 668889999
Q ss_pred EEEEECccccchhHHHHhhcC--EEEEeCCceeeCcccccCccCCcchhhh-------h-----------ccc--ccHHH
Q 004918 101 IVAAVEGLALGGGLELAMGCH--ARIAAPKTQLGLPELTLGVIPGFGGTQR-------L-----------PRL--VGLSK 158 (724)
Q Consensus 101 ~Iaav~G~a~GgG~~lalacD--~ria~~~a~f~~pe~~~G~~P~~g~~~~-------l-----------~r~--~G~~~ 158 (724)
|...+-|.|.+.|.-|++++| .|++.++|++.+-...-|.. .|-+.- + .+. .....
T Consensus 99 V~t~~~G~AaS~as~il~aG~~gkR~~lP~a~iMIHqP~~~~~--~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~ 176 (205)
T 4gm2_A 99 VYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSIIP--FNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNV 176 (205)
T ss_dssp EEEEEEEEEETHHHHHHTTSCTTCEEECTTCEEEECCCCCCCC--SSCCSCHHHHHHHHHHHHHHHHHHHHHHHTCCHHH
T ss_pred EEEEEEeeehhHHHHHHhcCCCCCEEecCCCEEEEecCccccc--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 999999999999999999999 59999999998766554431 111100 0 001 12334
Q ss_pred HHHHHHcCCCCCHHHHHHCCCcceecCcc
Q 004918 159 AIEMMLLSKSITSEEGWKLGLIDAVVTSE 187 (724)
Q Consensus 159 a~~l~ltg~~i~a~eA~~~Glv~~vv~~~ 187 (724)
..+++-....++|+||++.||||+|+..+
T Consensus 177 I~~~m~rd~~msa~EA~eyGlID~V~~~e 205 (205)
T 4gm2_A 177 ISNVLERDKYFNADEAVDFKLIDHILEKE 205 (205)
T ss_dssp HHHHTTSCEEEEHHHHHHTTSCSEECCC-
T ss_pred HHHHhcCCcccCHHHHHHcCCccEeecCC
Confidence 44555566778999999999999998653
No 268
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=97.66 E-value=4.8e-06 Score=88.05 Aligned_cols=100 Identities=15% Similarity=0.041 Sum_probs=68.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|++|++||++++.. . +. .+.. .++ +.+++
T Consensus 147 ~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~------------~~-------------~~~~-~~l~ell~~ 198 (331)
T 1xdw_A 147 CTVGVVGLGRIGRVAAQIFHGMGATVIGEDVFEIKG--I------------ED-------------YCTQ-VSLDEVLEK 198 (331)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS--C------------TT-------------TCEE-CCHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEECCCccHH--H------------Hh-------------cccc-CCHHHHHhh
Confidence 689999999999999999999999999999987531 0 00 0111 133 45689
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC--CCHHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST--IDLNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~--~~~~~~~~~~~ 436 (724)
||+|+.++|...+...-+-++..+.++++++++..+.+ .....+.+.+.
T Consensus 199 aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~ 249 (331)
T 1xdw_A 199 SDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVE 249 (331)
T ss_dssp CSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHH
Confidence 99999999976554433324556678999988654433 33344555543
No 269
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.62 E-value=9e-05 Score=67.52 Aligned_cols=39 Identities=26% Similarity=0.264 Sum_probs=35.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
+++|.|+|+|.+|..++..|.+.|++|+++|++++.++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~ 44 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNA 44 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 468999999999999999999999999999999877554
No 270
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.61 E-value=0.0001 Score=67.38 Aligned_cols=81 Identities=21% Similarity=0.189 Sum_probs=57.2
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 308 ~~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
-++|+|||+ |.||..++.+|.+.|++|+.+|.+.+.+ ..+....+++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i-----------------------------~G~~~~~s~~ 64 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI-----------------------------EGLKCYRSVR 64 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE-----------------------------TTEECBSSGG
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE-----------------------------CCeeecCCHH
Confidence 368999999 9999999999999999866666553211 1123344443
Q ss_pred C-cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEE
Q 004918 384 E-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 384 ~-~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
+ .+.+|+||.++| .+...+++.++.+ ...+.+++
T Consensus 65 el~~~vDlvii~vp--~~~v~~v~~~~~~-~g~~~i~~ 99 (138)
T 1y81_A 65 ELPKDVDVIVFVVP--PKVGLQVAKEAVE-AGFKKLWF 99 (138)
T ss_dssp GSCTTCCEEEECSC--HHHHHHHHHHHHH-TTCCEEEE
T ss_pred HhCCCCCEEEEEeC--HHHHHHHHHHHHH-cCCCEEEE
Confidence 3 457999999999 5777777777665 34455554
No 271
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=97.59 E-value=0.00019 Score=75.24 Aligned_cols=93 Identities=16% Similarity=0.226 Sum_probs=62.4
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc---ccCcc
Q 004918 310 KVAVIGG-GLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLDYS 383 (724)
Q Consensus 310 kI~VIG~-G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~~~ 383 (724)
||+|||+ |.+|.+++..|+..| .+|+++|+++. +..... +..... ..++.. +++++
T Consensus 2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~--~~~a~d--------L~~~~~--------~~~l~~~~~t~d~~ 63 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHT--PGVAAD--------LSHIET--------RATVKGYLGPEQLP 63 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSH--HHHHHH--------HTTSSS--------SCEEEEEESGGGHH
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCcc--HHHHHH--------HhccCc--------CceEEEecCCCCHH
Confidence 8999998 999999999999988 69999999971 111111 111110 013443 35664
Q ss_pred -CcCCCCEEEEccc--CCh------------HHHHHHHHHHHhhCCCCcEEEe
Q 004918 384 -EFKDVDMVIEAVI--ESV------------PLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 384 -~~~~aDlVIeav~--e~~------------~~k~~v~~~l~~~~~~~~ii~s 421 (724)
++++||+||.++. ... .+.+++.+.+.++++ +++|+.
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p-~a~viv 115 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCP-DAMICI 115 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCT-TSEEEE
T ss_pred HHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEE
Confidence 6999999999873 211 567777788888874 444443
No 272
>1up7_A 6-phospho-beta-glucosidase; hydrolase, family4 hydrolase, Na dependent; HET: G6P NAD; 2.4A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 PDB: 1up6_A* 1up4_A
Probab=97.59 E-value=0.00022 Score=77.45 Aligned_cols=119 Identities=14% Similarity=0.132 Sum_probs=72.0
Q ss_pred cceEEEEcCCCCcHHH--HHHHHH--C---CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 308 VRKVAVIGGGLMGSGI--ATAHIL--N---NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~i--A~~la~--~---G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
..||+|||+|.. .+. ...|+. . +.+|+++|+++++++... .+...+ ... . .++..++
T Consensus 2 ~~KI~IIGaG~v-~~~~l~~~l~~~~~~l~~~el~L~Di~~~~~~~~~-~~~~~~---~~~----------~-~~v~~t~ 65 (417)
T 1up7_A 2 HMRIAVIGGGSS-YTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV-DFVKRL---VKD----------R-FKVLISD 65 (417)
T ss_dssp CCEEEEETTTCT-THHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH-HHHHHH---HTT----------S-SEEEECS
T ss_pred CCEEEEECCCHH-HHHHHHHHHHhcccCCCcCEEEEEeCCHHHHHHHH-HHHHHH---hhC----------C-eEEEEeC
Confidence 369999999985 332 234455 3 568999999999877532 222211 110 0 2466677
Q ss_pred Cc-cCcCCCCEEEEcccC----------------------------------ChHHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 381 DY-SEFKDVDMVIEAVIE----------------------------------SVPLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 381 ~~-~~~~~aDlVIeav~e----------------------------------~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
|+ +++++||+||.++-- +..+..++.+++.+++ +++++.-|..
T Consensus 66 d~~~al~~AD~Viitagvg~~~~~~rd~~i~~k~glvgqeT~G~GGi~~~~rni~i~~~i~~~i~~~~--~A~lin~TNP 143 (417)
T 1up7_A 66 TFEGAVVDAKYVIFQFRPGGLKGRENDEGIPLKYGLIGQETTGVGGFSAALRAFPIVEEYVDTVRKTS--NATIVNFTNP 143 (417)
T ss_dssp SHHHHHTTCSEEEECCCTTHHHHHHHHHHGGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHTT--CCEEEECSSS
T ss_pred CHHHHhCCCCEEEEcCCCCCCCccchhhhhhhhcCcccccccccchhHHhhccHHHHHHHHHHHHHHC--CEEEEEeCCh
Confidence 87 889999999999821 1134667788899988 6666543333
Q ss_pred CCH-HHHhcccCCCCCEEEE
Q 004918 426 IDL-NIVGEKTSSQDRIIGA 444 (724)
Q Consensus 426 ~~~-~~~~~~~~~~~r~ig~ 444 (724)
..+ ++.........|++|+
T Consensus 144 vdi~t~a~~k~~p~~rviG~ 163 (417)
T 1up7_A 144 SGHITEFVRNYLEYEKFIGL 163 (417)
T ss_dssp HHHHHHHHHHTTCCSSEEEC
T ss_pred HHHHHHHHHHhCCCCCEEEe
Confidence 222 2333223333477774
No 273
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.58 E-value=0.00016 Score=67.29 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=35.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
++|.|+|+|.+|..++..|.+.|++|+++|++++.++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 58999999999999999999999999999999987554
No 274
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=97.57 E-value=0.00011 Score=77.37 Aligned_cols=102 Identities=19% Similarity=0.248 Sum_probs=65.4
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCC--CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc---ccC
Q 004918 308 VRKVAVIG-GGLMGSGIATAHILNN--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (724)
Q Consensus 308 ~~kI~VIG-~G~mG~~iA~~la~~G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (724)
.+||+|+| +|.+|.+++..|+..| ++|+++|++++. ..+. .+ ..... ...+.. +++
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~-~~~~-dL--------~~~~~--------~~~v~~~~~t~d 69 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAP-GVTA-DI--------SHMDT--------GAVVRGFLGQQQ 69 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHH-HHHH-HH--------HTSCS--------SCEEEEEESHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcH-hHHH-Hh--------hcccc--------cceEEEEeCCCC
Confidence 36899999 7999999999999999 799999998761 1111 01 11100 012222 345
Q ss_pred c-cCcCCCCEEEEcccC--C------------hHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 382 Y-SEFKDVDMVIEAVIE--S------------VPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 382 ~-~~~~~aDlVIeav~e--~------------~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
+ +++++||+||.++.- . ..+.+++.+.+.++.+ +.+|+.. +.|+..
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p-~~~viv~--SNPv~~ 130 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCP-RAIVNLI--SNPVNS 130 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC--CSSHHH
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCC-CeEEEEE--CCchHH
Confidence 5 668999999999842 1 1456677777887774 4554432 345544
No 275
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=97.54 E-value=8.2e-05 Score=77.54 Aligned_cols=86 Identities=20% Similarity=0.227 Sum_probs=58.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|.+|++||+++++.+... +.|. ..+. ..++ +.+++
T Consensus 158 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 215 (300)
T 2rir_A 158 SQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARIT-----------EMGL----------VPFH-TDELKEHVKD 215 (300)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTC----------EEEE-GGGHHHHSTT
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-----------HCCC----------eEEc-hhhHHHHhhC
Confidence 6899999999999999999999999999999987654321 1110 0001 1223 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
||+||.++|...-. ++..+.+++++++++
T Consensus 216 aDvVi~~~p~~~i~-----~~~~~~mk~g~~lin 244 (300)
T 2rir_A 216 IDICINTIPSMILN-----QTVLSSMTPKTLILD 244 (300)
T ss_dssp CSEEEECCSSCCBC-----HHHHTTSCTTCEEEE
T ss_pred CCEEEECCChhhhC-----HHHHHhCCCCCEEEE
Confidence 99999999953211 123345667776654
No 276
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=97.53 E-value=9.3e-05 Score=76.83 Aligned_cols=87 Identities=22% Similarity=0.277 Sum_probs=59.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|..+...|.+|++||++++..+.+. +.|. ..+. ..++ +.+++
T Consensus 156 ~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-----------~~g~----------~~~~-~~~l~~~l~~ 213 (293)
T 3d4o_A 156 ANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIA-----------EMGM----------EPFH-ISKAAQELRD 213 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-----------HTTS----------EEEE-GGGHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-----------HCCC----------eecC-hhhHHHHhcC
Confidence 6899999999999999999999999999999987654321 1110 0000 1223 45789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
+|+||.++|...-. . +..+.++++.++++.
T Consensus 214 aDvVi~~~p~~~i~-~----~~l~~mk~~~~lin~ 243 (293)
T 3d4o_A 214 VDVCINTIPALVVT-A----NVLAEMPSHTFVIDL 243 (293)
T ss_dssp CSEEEECCSSCCBC-H----HHHHHSCTTCEEEEC
T ss_pred CCEEEECCChHHhC-H----HHHHhcCCCCEEEEe
Confidence 99999999853211 1 223456777777643
No 277
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=97.53 E-value=5.9e-05 Score=77.57 Aligned_cols=67 Identities=16% Similarity=0.162 Sum_probs=51.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||.+++..|.+.|++|+++||++++++...+. .+ +...+++ +.+++
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~----------~g-------------~~~~~~~~~~~~~ 186 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK----------FP-------------LEVVNSPEEVIDK 186 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT----------SC-------------EEECSCGGGTGGG
T ss_pred CEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH----------cC-------------CeeehhHHhhhcC
Confidence 589999999999999999999999999999999876553210 01 1222244 56789
Q ss_pred CCEEEEcccCC
Q 004918 388 VDMVIEAVIES 398 (724)
Q Consensus 388 aDlVIeav~e~ 398 (724)
+|+||.|+|..
T Consensus 187 aDiVi~atp~~ 197 (275)
T 2hk9_A 187 VQVIVNTTSVG 197 (275)
T ss_dssp CSEEEECSSTT
T ss_pred CCEEEEeCCCC
Confidence 99999999844
No 278
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.46 E-value=0.00011 Score=67.84 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=61.2
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCCH--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 309 ~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
++|+|||+ |.||..++.+|.+.|++|+.+|.+. +.+ ..+....++
T Consensus 14 ~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i-----------------------------~G~~~~~sl 64 (145)
T 2duw_A 14 RTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL-----------------------------LGQQGYATL 64 (145)
T ss_dssp CCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE-----------------------------TTEECCSST
T ss_pred CEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc-----------------------------CCeeccCCH
Confidence 57999999 8999999999999999977766654 211 112333444
Q ss_pred cC-cCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhccc
Q 004918 383 SE-FKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT 435 (724)
Q Consensus 383 ~~-~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~ 435 (724)
++ ...+|+|+.++| .+...+++.++.+. ..+.+++ .+++.. .++.+..
T Consensus 65 ~el~~~~Dlvii~vp--~~~v~~v~~~~~~~-g~~~i~i-~~~~~~-~~l~~~a 113 (145)
T 2duw_A 65 ADVPEKVDMVDVFRN--SEAAWGVAQEAIAI-GAKTLWL-QLGVIN-EQAAVLA 113 (145)
T ss_dssp TTCSSCCSEEECCSC--STHHHHHHHHHHHH-TCCEEEC-CTTCCC-HHHHHHH
T ss_pred HHcCCCCCEEEEEeC--HHHHHHHHHHHHHc-CCCEEEE-cCChHH-HHHHHHH
Confidence 33 357899999999 45666777776653 4455554 344443 3444433
No 279
>3bf0_A Protease 4; bacterial, hydrolase, inner membrane, membrane, transmembrane; 2.55A {Escherichia coli} PDB: 3bez_A
Probab=97.44 E-value=0.00064 Score=77.41 Aligned_cols=144 Identities=17% Similarity=0.093 Sum_probs=94.0
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEcCCCCccCC-CCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEECcccc
Q 004918 32 IVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGG-FDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAVEGLAL 110 (724)
Q Consensus 32 ~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG-~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~ 110 (724)
...++.+.|+.+..|+.++.|+|.-. |-| +++..... ..+.+ +.+....|||||.+++ +.
T Consensus 71 ~~~~i~~~L~~a~~d~~ik~I~L~in----spGgG~v~~~~~-------------I~~~i-~~~k~~gkpvva~~~~-aa 131 (593)
T 3bf0_A 71 SLFDIVNTIRQAKDDRNITGIVMDLK----NFAGGDQPSMQY-------------IGKAL-KEFRDSGKPVYAVGEN-YS 131 (593)
T ss_dssp EHHHHHHHHHHHHHCTTCCCEEEECT----EEEECCHHHHHH-------------HHHHH-HHHHHTTCCEEEEESC-EE
T ss_pred CHHHHHHHHHHHHhCCCceEEEEEeC----CCCCCcHHHHHH-------------HHHHH-HHHHhcCCeEEEEEcc-ch
Confidence 46788999999999999999999632 122 44432211 12333 3355567999999876 66
Q ss_pred chhHHHHhhcCEEEEeCCceeeCccccc------------CccC---------Ccchhh-----------hhc-------
Q 004918 111 GGGLELAMGCHARIAAPKTQLGLPELTL------------GVIP---------GFGGTQ-----------RLP------- 151 (724)
Q Consensus 111 GgG~~lalacD~ria~~~a~f~~pe~~~------------G~~P---------~~g~~~-----------~l~------- 151 (724)
-+|.-|+++||.+++.+.+.++...+.. |+-+ ..+..+ .+.
T Consensus 132 s~~y~lAsaad~i~~~P~~~vg~~g~~~~~~~~~~~l~klGi~~~~~~~G~~K~a~ep~~r~~ms~~~re~~~~~l~~~~ 211 (593)
T 3bf0_A 132 QGQYYLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELW 211 (593)
T ss_dssp HHHHHHHTTSSEEEECTTCCEECCCCBCCEEECHHHHHHTTCEEEEEEECTTCGGGHHHHCSSCCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhCCEEEECCCceEEEecccccccCHHHHHHHcCCeEEEEEeecccCCCCcccCCCCCHHHHHHHHHHHHHHH
Confidence 7889999999999999999988766643 2210 000000 000
Q ss_pred ----------ccccHHHHHHHHHc-------CCCCCHHHHHHCCCcceecCcchHHHHHH
Q 004918 152 ----------RLVGLSKAIEMMLL-------SKSITSEEGWKLGLIDAVVTSEELLKVSR 194 (724)
Q Consensus 152 ----------r~~G~~~a~~l~lt-------g~~i~a~eA~~~Glv~~vv~~~~l~~~a~ 194 (724)
|-+......+++-. +..++|++|++.||||++...+++.+...
T Consensus 212 ~~~~~~va~~Rg~~~e~l~~~~d~~~~~l~~~~~~ta~~A~~~GLvD~i~~~~e~~~~l~ 271 (593)
T 3bf0_A 212 QNYLNTVAANRQIPAEQVFPGAQGLLEGLTKTGGDTAKYALENKLVDALASSAEIEKALT 271 (593)
T ss_dssp HHHHHHHHHHHTSCHHHHCCHHHHHHHHHHTTTTCHHHHHHHTTSSSEECCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHhhhhhhhhhcCCccHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 11222333334433 79999999999999999997766655543
No 280
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=97.41 E-value=0.00017 Score=76.17 Aligned_cols=99 Identities=15% Similarity=0.156 Sum_probs=65.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------cEEEEeCC----HHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCc
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVN----SEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKML 376 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~-------~V~l~d~~----~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i 376 (724)
+||+|+|+ |.+|.+++..|+..|+ +|+++|++ +++++.....+. ..... ....+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~--------~~~~~------~~~~i 71 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID--------DCAFP------LLAGM 71 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH--------TTTCT------TEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh--------hhccc------ccCcE
Confidence 58999998 9999999999999886 89999999 544432111111 11000 12345
Q ss_pred ccccCc-cCcCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 377 KGVLDY-SEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 377 ~~~~~~-~~~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
..+++. +++++||+||.+..- +..+.+++.+.+.+++.++++|+.
T Consensus 72 ~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~ 131 (329)
T 1b8p_A 72 TAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLV 131 (329)
T ss_dssp EEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 555664 779999999988631 224556677788888745655543
No 281
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.35 E-value=0.00051 Score=67.76 Aligned_cols=95 Identities=16% Similarity=0.163 Sum_probs=59.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCC-HHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLT-QDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~-~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+||.|+|+|.+|..+|..|.+.|++|+++|++++.++...+.. ...+-.|-.+ .+... ...+.+
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~-----------~a~i~~ 65 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILR-----------DAEVSK 65 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHH-----------HHTCCT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHH-----------hcCccc
Confidence 3799999999999999999999999999999999877643210 0000011111 00000 023689
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhh-CCCCcEEE
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKA-CPPHCILA 420 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~-~~~~~ii~ 420 (724)
||+||.+++++. ...+...+... .+...+++
T Consensus 66 ad~vi~~~~~d~--~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 66 NDVVVILTPRDE--VNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp TCEEEECCSCHH--HHHHHHHHHHHTSCCCEEEE
T ss_pred CCEEEEecCCcH--HHHHHHHHHHHHcCCCeEEE
Confidence 999999998543 23334444443 44445554
No 282
>3u95_A Glycoside hydrolase, family 4; hydrolysis, cytosol; 2.00A {Thermotoga neapolitana} PDB: 1vjt_A*
Probab=97.33 E-value=0.00029 Score=77.91 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=49.5
Q ss_pred ceEEEEcCCCCcHH--HHHHHHH----C--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 309 RKVAVIGGGLMGSG--IATAHIL----N--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 309 ~kI~VIG~G~mG~~--iA~~la~----~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
.||+|||+|..|.. +...++. . +.+|+++|+++++++.....+++..... + ..-++..++
T Consensus 1 mKI~iIGaGs~~~t~~l~~~~~~~~~l~~~~~ei~L~Di~~~rl~~~~~~~~~~~~~~---~---------~~~~i~~t~ 68 (477)
T 3u95_A 1 MKISIVGAGSVRFALQLVEDIAQTDELSREDTHIYLMDVHERRLNASYILARKYVEEL---N---------SPVKVVKTE 68 (477)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCTTTCSTTCEEEEECSCHHHHHHHHHHHHHHHHHH---T---------CCCEEEEES
T ss_pred CEEEEECCCchhhHHHHHHHHHhhHhcCCCCCEEEEECCCHHHHHHHHHHHHHHHHHc---C---------CCeEEEEeC
Confidence 38999999997754 2222332 2 3479999999998876544333332211 1 012467788
Q ss_pred Cc-cCcCCCCEEEEcc
Q 004918 381 DY-SEFKDVDMVIEAV 395 (724)
Q Consensus 381 ~~-~~~~~aDlVIeav 395 (724)
|. +++++||+||.++
T Consensus 69 d~~eAl~gAD~Vi~~~ 84 (477)
T 3u95_A 69 SLDEAIEGADFIINTA 84 (477)
T ss_dssp CHHHHHTTCSEEEECC
T ss_pred CHHHHhCCCCEEEECc
Confidence 87 6799999999886
No 283
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=97.32 E-value=0.00011 Score=81.07 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=61.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|.+|++||+++.....+. ..| ... .++ +.+++
T Consensus 278 ktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-----------~~G-------------~~~-~~l~ell~~ 332 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAA-----------MEG-------------YRV-VTMEYAADK 332 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-----------HcC-------------CEe-CCHHHHHhc
Confidence 6899999999999999999999999999999987632211 111 111 233 56889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
||+||.++. ...+. -.+..+.++++++|+...++
T Consensus 333 aDiVi~~~~-t~~lI---~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 333 ADIFVTATG-NYHVI---NHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp CSEEEECSS-SSCSB---CHHHHHHCCTTEEEEECSSS
T ss_pred CCEEEECCC-ccccc---CHHHHhhCCCCcEEEEcCCC
Confidence 999999983 22211 13445668899988754444
No 284
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=97.32 E-value=8.6e-05 Score=81.51 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=61.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.||.++|..+...|.+|++||+++.....+. ..| +.. .++ +.+++
T Consensus 258 ktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-----------~~g-------------~~~-~~l~ell~~ 312 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQAV-----------MEG-------------FNV-VTLDEIVDK 312 (479)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-----------TTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-----------HcC-------------CEe-cCHHHHHhc
Confidence 6899999999999999999999999999999987643321 111 111 233 56889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
||+||.+.. ...+ +-.+..+.++++++|+..+++
T Consensus 313 aDiVi~~~~-t~~l---I~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 313 GDFFITCTG-NVDV---IKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSEEEECCS-SSSS---BCHHHHTTCCTTCEEEECSST
T ss_pred CCEEEECCC-hhhh---cCHHHHhhcCCCcEEEEeCCC
Confidence 999999962 2221 112444568899988754444
No 285
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=97.31 E-value=0.0003 Score=74.68 Aligned_cols=95 Identities=20% Similarity=0.207 Sum_probs=61.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
++|+|||+|.||..++..+.. ...+|++|||+++++++..+.+.. . .| + .+...++. +.+
T Consensus 130 ~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a~~la~~~~~----~--~g-~----------~~~~~~~~~eav 192 (350)
T 1x7d_A 130 RKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKE----Y--SG-L----------TIRRASSVAEAV 192 (350)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTT----C--TT-C----------EEEECSSHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHHHHHHHHHHh----c--cC-c----------eEEEeCCHHHHH
Confidence 589999999999999988754 356899999999988775443210 0 01 0 12233444 567
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
++||+||.|+|... ...++. .+.+++++.|...++
T Consensus 193 ~~aDiVi~aTps~~--~~pvl~--~~~l~~G~~V~~vgs 227 (350)
T 1x7d_A 193 KGVDIITTVTADKA--YATIIT--PDMLEPGMHLNAVGG 227 (350)
T ss_dssp TTCSEEEECCCCSS--EEEEEC--GGGCCTTCEEEECSC
T ss_pred hcCCEEEEeccCCC--CCceec--HHHcCCCCEEEECCC
Confidence 89999999998541 001111 135667776654433
No 286
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.26 E-value=0.00057 Score=68.50 Aligned_cols=86 Identities=20% Similarity=0.117 Sum_probs=56.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEE-EeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
+|.||+|+|+|.||..++..+.+.+.+++. +|++++. . ..+..+++++.+
T Consensus 2 ~MmkI~ViGaGrMG~~i~~~l~~~~~eLva~~d~~~~~----------------~-------------~gv~v~~dl~~l 52 (243)
T 3qy9_A 2 ASMKILLIGYGAMNQRVARLAEEKGHEIVGVIENTPKA----------------T-------------TPYQQYQHIADV 52 (243)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-------------------------------CCSCBCSCTTTC
T ss_pred CceEEEEECcCHHHHHHHHHHHhCCCEEEEEEecCccc----------------c-------------CCCceeCCHHHH
Confidence 367999999999999999999988777654 7887652 0 123445666444
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~ 428 (724)
.++|+||+... ++...+. +. +..+.-+++.|++++.
T Consensus 53 ~~~DVvIDft~--p~a~~~~---~~--l~~g~~vVigTTG~s~ 88 (243)
T 3qy9_A 53 KGADVAIDFSN--PNLLFPL---LD--EDFHLPLVVATTGEKE 88 (243)
T ss_dssp TTCSEEEECSC--HHHHHHH---HT--SCCCCCEEECCCSSHH
T ss_pred hCCCEEEEeCC--hHHHHHH---HH--HhcCCceEeCCCCCCH
Confidence 49999998765 3333333 22 4555545555666644
No 287
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=97.23 E-value=0.00031 Score=71.59 Aligned_cols=64 Identities=17% Similarity=0.230 Sum_probs=49.6
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCCC
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKDV 388 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~a 388 (724)
+|+|||+|.||.+++..|.+.|++|+++||++++++...+.+ + .. .+++ +. +++
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~----------~-------------~~-~~~~~~~-~~~ 172 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEF----------G-------------LR-AVPLEKA-REA 172 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH----------T-------------CE-ECCGGGG-GGC
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------c-------------cc-hhhHhhc-cCC
Confidence 799999999999999999999999999999998766543211 1 01 1233 44 889
Q ss_pred CEEEEcccCC
Q 004918 389 DMVIEAVIES 398 (724)
Q Consensus 389 DlVIeav~e~ 398 (724)
|+||.|+|..
T Consensus 173 Divi~~tp~~ 182 (263)
T 2d5c_A 173 RLLVNATRVG 182 (263)
T ss_dssp SEEEECSSTT
T ss_pred CEEEEccCCC
Confidence 9999999844
No 288
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=97.23 E-value=0.0011 Score=70.46 Aligned_cols=98 Identities=12% Similarity=0.150 Sum_probs=63.1
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC--CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
+++.||+|||+|.||...+..+.+. +++|+ ++|++++++++..+.. .+...+++
T Consensus 11 ~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~-----------------------~~~~~~~~ 67 (354)
T 3q2i_A 11 DRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERT-----------------------GARGHASL 67 (354)
T ss_dssp SSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHH-----------------------CCEEESCH
T ss_pred CCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHc-----------------------CCceeCCH
Confidence 3456899999999999999999887 77755 8899999876643210 12345566
Q ss_pred cC-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 383 SE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 383 ~~-~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
++ ++ ++|+|+.|+|.... .++.....+. ...+++-..-+....+
T Consensus 68 ~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~a~~~~~ 114 (354)
T 3q2i_A 68 TDMLAQTDADIVILTTPSGLH--PTQSIECSEA--GFHVMTEKPMATRWED 114 (354)
T ss_dssp HHHHHHCCCSEEEECSCGGGH--HHHHHHHHHT--TCEEEECSSSCSSHHH
T ss_pred HHHhcCCCCCEEEECCCcHHH--HHHHHHHHHC--CCCEEEeCCCcCCHHH
Confidence 33 43 79999999995433 3333333221 2335544444555543
No 289
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=97.23 E-value=0.0056 Score=62.58 Aligned_cols=152 Identities=13% Similarity=0.104 Sum_probs=95.7
Q ss_pred EEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHh
Q 004918 18 ITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (724)
Q Consensus 18 i~l~~p~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (724)
|.-|++. .-+++....+.+.++++.+... .+-+|.|.-.|+. -..+-. . . ...+. .....+ .++.
T Consensus 125 v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~-~lPlI~l~dsgGa-----r~qEGi---~-s-l~q~a-ki~~~l-~~~s 191 (285)
T 2f9i_B 125 VAVMDSRFRMGSMGSVIGEKICRIIDYCTEN-RLPFILFSASGGA-----RMQEGI---I-S-LMQMG-KTSVSL-KRHS 191 (285)
T ss_dssp EEEECTTTGGGCCCHHHHHHHHHHHHHHHHT-TCCEEEEEEECSC-----CGGGHH---H-H-HHHHH-HHHHHH-HHHH
T ss_pred EEEEccccccCcCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCCCc-----chhhhh---h-h-HhHHH-HHHHHH-HHHH
Confidence 3345554 3789999999999999988865 4667777644332 222100 0 0 00111 111233 4466
Q ss_pred cCCCcEEEEECccccchhHHH-HhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHH
Q 004918 96 DCKKPIVAAVEGLALGGGLEL-AMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG 174 (724)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~l-alacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA 174 (724)
....|.|+++-|.|.||+... ++.+|+++|.++|.+++..... ....+-+.+. -.--+|+-+
T Consensus 192 ~~~vP~Isvv~g~~~GG~~as~a~~~D~i~a~p~A~i~~aGP~v-------i~~~~~~~~~----------e~~~~Ae~~ 254 (285)
T 2f9i_B 192 DAGLLYISYLTHPTTGGVSASFASVGDINLSEPKALIGFAGRRV-------IEQTINEKLP----------DDFQTAEFL 254 (285)
T ss_dssp HTTCCEEEEEEEEEEHHHHTTGGGCCSEEEECTTCBEESSCHHH-------HHHHHTSCCC----------TTTTBHHHH
T ss_pred cCCCCEEEEEeCCccHHHHHHhhhCCCEEEEeCCcEEEEcCHHH-------HHHHhcccch----------HhHhhHHHH
Confidence 788999999999999998655 7899999999998887632211 1111111111 011247778
Q ss_pred HHCCCcceecCcchHHHHHHHHHHH
Q 004918 175 WKLGLIDAVVTSEELLKVSRLWALD 199 (724)
Q Consensus 175 ~~~Glv~~vv~~~~l~~~a~~~a~~ 199 (724)
.+.|+||.|++++++.+...++...
T Consensus 255 ~~~G~iD~Iv~~~e~r~~l~~~L~~ 279 (285)
T 2f9i_B 255 LEHGQLDKVVHRNDMRQTLSEILKI 279 (285)
T ss_dssp HHTTCCSEECCGGGHHHHHHHHHHH
T ss_pred HhcCCccEEeChHHHHHHHHHHHHH
Confidence 8999999999988877766665543
No 290
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=97.22 E-value=0.00038 Score=76.90 Aligned_cols=86 Identities=26% Similarity=0.260 Sum_probs=61.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.||..+|+.+...|.+|+++|++++.++.+.+ .|. .. .++ +.+++
T Consensus 275 ktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~-----------~Ga-------------~~-~~l~e~l~~ 329 (494)
T 3ce6_A 275 KKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQAMM-----------EGF-------------DV-VTVEEAIGD 329 (494)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TTC-------------EE-CCHHHHGGG
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----------cCC-------------EE-ecHHHHHhC
Confidence 68999999999999999999999999999999987665421 121 00 122 34678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
+|+||++++...-+. .+..+.++++++|+...
T Consensus 330 aDvVi~atgt~~~i~----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 330 ADIVVTATGNKDIIM----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CSEEEECSSSSCSBC----HHHHHHSCTTCEEEECS
T ss_pred CCEEEECCCCHHHHH----HHHHHhcCCCcEEEEeC
Confidence 999999987443222 23445578888876433
No 291
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.21 E-value=0.00087 Score=70.68 Aligned_cols=101 Identities=9% Similarity=-0.030 Sum_probs=63.6
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
+++.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. .+ .....++++
T Consensus 3 m~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------~~------------~~~~~~~~~ 60 (330)
T 3e9m_A 3 LDKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKE----------LA------------IPVAYGSYE 60 (330)
T ss_dssp CCCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHH----------TT------------CCCCBSSHH
T ss_pred CCeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHH----------cC------------CCceeCCHH
Confidence 3456899999999999999999885 67766 789999886654321 01 112344553
Q ss_pred -CcC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 384 -EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 384 -~~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
.+. ++|+|+.|+|.... .++.....+. ...+++-...+....+..
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~vl~EKP~~~~~~e~~ 108 (330)
T 3e9m_A 61 ELCKDETIDIIYIPTYNQGH--YSAAKLALSQ--GKPVLLEKPFTLNAAEAE 108 (330)
T ss_dssp HHHHCTTCSEEEECCCGGGH--HHHHHHHHHT--TCCEEECSSCCSSHHHHH
T ss_pred HHhcCCCCCEEEEcCCCHHH--HHHHHHHHHC--CCeEEEeCCCCCCHHHHH
Confidence 333 79999999995543 3333333322 223666555555555433
No 292
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.21 E-value=0.00047 Score=71.85 Aligned_cols=96 Identities=17% Similarity=0.211 Sum_probs=61.8
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHC-C--CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc---ccC
Q 004918 309 RKVAVIG-GGLMGSGIATAHILN-N--IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG---VLD 381 (724)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~la~~-G--~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~---~~~ 381 (724)
+||+||| +|.+|.+++..|+.. + .+++++|+++ .++.-..++. .... ...+.. +++
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~--------~~~~--------~~~v~~~~~~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLS--------HIPT--------AVKIKGFSGEDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHH--------TSCS--------SEEEEEECSSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhh--------CCCC--------CceEEEecCCCc
Confidence 4899999 899999999999875 5 4899999987 3221111111 1100 012322 245
Q ss_pred ccCcCCCCEEEEcccC--------------ChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 382 YSEFKDVDMVIEAVIE--------------SVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 382 ~~~~~~aDlVIeav~e--------------~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
++++++||+||.+..- +..+.+++.+.+.++++ +++++..
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p-~a~vlvv 117 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCP-KACIGII 117 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCT-TSEEEEC
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC-CcEEEEe
Confidence 6889999999998731 33455666677888865 5555433
No 293
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=97.19 E-value=0.0011 Score=69.35 Aligned_cols=98 Identities=18% Similarity=0.128 Sum_probs=62.7
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCC--cEEEEeC--CHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC--c
Q 004918 310 KVAVIGG-GLMGSGIATAHILNNI--YVVLKEV--NSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD--Y 382 (724)
Q Consensus 310 kI~VIG~-G~mG~~iA~~la~~G~--~V~l~d~--~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~--~ 382 (724)
||+|+|+ |.+|..++..|+..|+ ++.++|+ ++++++.....+.+.. .. .+. ...+..+++ .
T Consensus 2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~~--~~~---------~~~i~~~~d~l~ 69 (313)
T 1hye_A 2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-AG--TRS---------DANIYVESDENL 69 (313)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-TT--SCC---------CCEEEEEETTCG
T ss_pred EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-Hh--cCC---------CeEEEeCCcchH
Confidence 8999999 9999999999998885 7999999 7765443222222211 00 000 012333333 5
Q ss_pred cCcCCCCEEEEccc--C------------ChHHHHHHHHHHHhhCCCCcEEEe
Q 004918 383 SEFKDVDMVIEAVI--E------------SVPLKQKIFSELEKACPPHCILAT 421 (724)
Q Consensus 383 ~~~~~aDlVIeav~--e------------~~~~k~~v~~~l~~~~~~~~ii~s 421 (724)
+++++||+||.+.- . +..+.+++.+.+.+++ +.+|+.
T Consensus 70 ~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv 120 (313)
T 1hye_A 70 RIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFV 120 (313)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEE
T ss_pred HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEE
Confidence 78999999998862 1 2335556677777877 555543
No 294
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.16 E-value=0.00033 Score=73.92 Aligned_cols=102 Identities=16% Similarity=0.171 Sum_probs=65.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------cEEEEeCCHHH--HHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNSEY--LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~-------~V~l~d~~~~~--~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (724)
-||+|+|+ |.+|.+++..|+.... ++.++|+++.. ++-..-++.. ... .....+..
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~--------~~~------~~~~~~~~ 90 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED--------CAF------PLLDKVVV 90 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--------TTC------TTEEEEEE
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh--------cCc------cCCCcEEE
Confidence 59999997 9999999999998754 79999998643 2211111111 000 01123333
Q ss_pred ccCc-cCcCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 379 VLDY-SEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 379 ~~~~-~~~~~aDlVIeav--~e------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
+++. +++++||+||.+. |- |..+.+++.+.+.++++++++|+..+.
T Consensus 91 ~~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 91 TADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cCChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence 4444 7899999999875 21 345666677778888888886654333
No 295
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.15 E-value=0.00057 Score=71.82 Aligned_cols=69 Identities=17% Similarity=0.046 Sum_probs=51.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHIL--NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~--~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
++|+|||+|.||..++..++. ...+|++|||+++++++..+.+.. .+ + .+. .++. +.+
T Consensus 126 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a~~la~~~~~-------~~-~----------~~~-~~~~~e~v 186 (322)
T 1omo_A 126 SVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCED-------RG-I----------SAS-VQPAEEAS 186 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHH-------TT-C----------CEE-ECCHHHHT
T ss_pred CEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHh-------cC-c----------eEE-ECCHHHHh
Confidence 589999999999999999987 356899999999998876543321 01 0 122 3444 567
Q ss_pred CCCCEEEEcccC
Q 004918 386 KDVDMVIEAVIE 397 (724)
Q Consensus 386 ~~aDlVIeav~e 397 (724)
++|+||.|+|.
T Consensus 187 -~aDvVi~aTp~ 197 (322)
T 1omo_A 187 -RCDVLVTTTPS 197 (322)
T ss_dssp -SSSEEEECCCC
T ss_pred -CCCEEEEeeCC
Confidence 89999999984
No 296
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=97.13 E-value=0.0086 Score=66.33 Aligned_cols=146 Identities=12% Similarity=0.077 Sum_probs=96.2
Q ss_pred EEEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHH--H
Q 004918 17 IITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVV--N 92 (724)
Q Consensus 17 ~i~l~~p~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~--~ 92 (724)
.|.-+.+. .-++.....+.+..+++.+..+ .+-+|.|.-. .|+-+.+- ...+.. ..+.+. .
T Consensus 100 ~v~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~dS-----gGaRmqEg--------~~~l~~-~~~i~~~~~ 164 (530)
T 3iav_A 100 AVFSQDFTVFGGALGEVYGQKIVKVMDFALKT-GCPVVGINDS-----GGARIQEG--------VASLGA-YGEIFRRNT 164 (530)
T ss_dssp EEEEECTTSGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CSBCGGGT--------HHHHHH-HHHHHHHHH
T ss_pred EEEEECCCcceEeccHHHHHHHHHHHHHHHHc-CCCEEEEEcC-----CCcchhhh--------hhhHHH-HHHHHHHHH
Confidence 33444553 4789999999999999988765 4667777643 33334321 001111 112221 1
Q ss_pred HHhcCCCcEEEEECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCH
Q 004918 93 LIEDCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITS 171 (724)
Q Consensus 93 ~l~~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a 171 (724)
.+.. -+|+|++|.|.|.|||......||++|++++ +.+++. |+.... ..+|+.+++
T Consensus 165 ~~s~-~iP~Isvv~G~~~GG~a~~~al~D~~im~~~~a~i~~a--------------------GP~vi~--~~~ge~v~~ 221 (530)
T 3iav_A 165 HASG-VIPQISLVVGPCAGGAVYSPAITDFTVMVDQTSHMFIT--------------------GPDVIK--TVTGEDVGF 221 (530)
T ss_dssp HTTT-TSCEEEEECSEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHH--HHHCCCCCH
T ss_pred HHcC-CCCEEEEEecCcchHHHHHHHhCCEEEEecCCcEEEec--------------------CHHHHH--HHhCCcCCh
Confidence 1222 4999999999999999988889999999875 877762 322221 267899999
Q ss_pred HHH-------HHCCCcceecCcc-hHHHHHHHHHHHH
Q 004918 172 EEG-------WKLGLIDAVVTSE-ELLKVSRLWALDI 200 (724)
Q Consensus 172 ~eA-------~~~Glv~~vv~~~-~l~~~a~~~a~~l 200 (724)
++. ...|++|.++++| +..+.+.++...+
T Consensus 222 e~LGGa~~h~~~sGv~d~va~de~~a~~~~r~~ls~l 258 (530)
T 3iav_A 222 EELGGARTHNSTSGVAHHMAGDEKDAVEYVKQLLSYL 258 (530)
T ss_dssp HHHHBHHHHHHTSCCCSEEESSHHHHHHHHHHHHHHS
T ss_pred hhcchHHHHHhccCceeEEecChHHHHHHHHHHHHhc
Confidence 876 6899999999775 3555555555443
No 297
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.12 E-value=0.00092 Score=69.69 Aligned_cols=98 Identities=12% Similarity=-0.040 Sum_probs=62.3
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHH-CCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-
Q 004918 307 GVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY- 382 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~la~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~- 382 (724)
++.||+|||+|.||.. ++..+.+ .+++++ ++|++++++++..+.. | +...+++
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------~-------------~~~~~~~~ 61 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSDY----------R-------------IMPFDSIE 61 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHHH----------T-------------CCBCSCHH
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCCcCCHH
Confidence 3468999999999997 8888876 477777 7999999877643211 1 1123454
Q ss_pred cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 383 ~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
+.++++|+|+.|+|.... .++.....+. ...+++....+....+.
T Consensus 62 ~ll~~~D~V~i~tp~~~h--~~~~~~al~~--gk~vl~EKP~~~~~~~~ 106 (308)
T 3uuw_A 62 SLAKKCDCIFLHSSTETH--YEIIKILLNL--GVHVYVDKPLASTVSQG 106 (308)
T ss_dssp HHHTTCSEEEECCCGGGH--HHHHHHHHHT--TCEEEECSSSSSSHHHH
T ss_pred HHHhcCCEEEEeCCcHhH--HHHHHHHHHC--CCcEEEcCCCCCCHHHH
Confidence 345689999999995443 3444333332 22355544555555543
No 298
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=97.12 E-value=0.0054 Score=67.90 Aligned_cols=137 Identities=12% Similarity=0.106 Sum_probs=90.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHH-HHhcCCCcEEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVN-LIEDCKKPIVA 103 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~kp~Ia 103 (724)
.-++.....+.+..+++.+... .+-+|.|.-. .|+.+.+-.. .+.... +.+.+ ....-..|+|+
T Consensus 118 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dS-----GGARmqeg~~--------sl~~~~-~i~~~~~~~s~~iP~Is 182 (531)
T 3n6r_B 118 GGSVSETHSKKICKIMDMAMQN-GAPVIGINDS-----GGARIQEGVD--------SLAGYG-EVFQRNIMASGVVPQIS 182 (531)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECC-----CCBCGGGTHH--------HHHHHH-HHHHHHHHTTTTSCEEE
T ss_pred cccccHHHHHHHHHHHHHHHHc-CCCEEEEeCC-----CccccCcccc--------hhhhHH-HHHHHHHHHhCCCCEEE
Confidence 3789999999999999988765 4567777643 4444433110 011111 22211 11224589999
Q ss_pred EECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHH-------H
Q 004918 104 AVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------W 175 (724)
Q Consensus 104 av~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA-------~ 175 (724)
+|.|.|.|||......||++|+.++ +.+++ -|+.... ..+|+.+++++. .
T Consensus 183 vv~Gp~~GG~a~s~a~~D~vi~~~~~a~i~~--------------------aGP~vI~--~~~ge~v~~E~LGGa~~h~~ 240 (531)
T 3n6r_B 183 MIMGPCAGGAVYSPAMTDFIFMVKDSSYMFV--------------------TGPDVVK--TVTNEQVSAEELGGATTHTR 240 (531)
T ss_dssp EECSCCBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHHH--HHHCCCCCHHHHHBHHHHHH
T ss_pred EEeCCcchHHHHHhhhCCEEEEecCCceEee--------------------cCHHHHH--HHhCCccChhhcchHHHHhh
Confidence 9999999999988888999999975 66554 1222111 257899999998 8
Q ss_pred HCCCcceecCcchHHHHHHHHHHHHH
Q 004918 176 KLGLIDAVVTSEELLKVSRLWALDIA 201 (724)
Q Consensus 176 ~~Glv~~vv~~~~l~~~a~~~a~~la 201 (724)
+.|++|.+++.|+ .+.+.++++.
T Consensus 241 ~sG~~d~v~~~e~---~a~~~~r~ll 263 (531)
T 3n6r_B 241 KSSVADAAFENDV---EALAEVRRLV 263 (531)
T ss_dssp TTSCCSEEESSHH---HHHHHHHHHH
T ss_pred ccCcceEEeCCHH---HHHHHHHHHH
Confidence 9999999998753 3444444443
No 299
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=97.11 E-value=0.00035 Score=72.98 Aligned_cols=91 Identities=14% Similarity=0.164 Sum_probs=58.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
++|+|||+|.||..++..+... ..+|++|||+ +.++..++++..+ | -.+... +. +++
T Consensus 122 ~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~--~a~~la~~l~~~~------g-----------~~~~~~-~~~eav 181 (313)
T 3hdj_A 122 SVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY--ASPEILERIGRRC------G-----------VPARMA-APADIA 181 (313)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT--CCHHHHHHHHHHH------T-----------SCEEEC-CHHHHH
T ss_pred cEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc--HHHHHHHHHHHhc------C-----------CeEEEe-CHHHHH
Confidence 5899999999999999999763 4589999999 4444333222110 1 012223 44 567
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
++||+||.|+|.... ++. .+.++++++|++..|.
T Consensus 182 ~~aDIVi~aT~s~~p----vl~--~~~l~~G~~V~~vGs~ 215 (313)
T 3hdj_A 182 AQADIVVTATRSTTP----LFA--GQALRAGAFVGAIGSS 215 (313)
T ss_dssp HHCSEEEECCCCSSC----SSC--GGGCCTTCEEEECCCS
T ss_pred hhCCEEEEccCCCCc----ccC--HHHcCCCcEEEECCCC
Confidence 899999999985322 221 2456777777655443
No 300
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.11 E-value=0.0015 Score=69.28 Aligned_cols=97 Identities=16% Similarity=0.189 Sum_probs=63.2
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
+.||+|||+|.||..++..+.+. +++|+ ++|++++.++...+. .+ ....+++ +.
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~----------------------~g-~~~~~~~~~~ 60 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEA----------------------NG-AEAVASPDEV 60 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHT----------------------TT-CEEESSHHHH
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH----------------------cC-CceeCCHHHH
Confidence 45899999999999999999886 67766 799999886653220 11 2334555 34
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 385 ~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
++ ++|+|+.|+|.... .++.....+. ...+++....+....+.
T Consensus 61 l~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~~~~~~~~ 105 (344)
T 3euw_A 61 FARDDIDGIVIGSPTSTH--VDLITRAVER--GIPALCEKPIDLDIEMV 105 (344)
T ss_dssp TTCSCCCEEEECSCGGGH--HHHHHHHHHT--TCCEEECSCSCSCHHHH
T ss_pred hcCCCCCEEEEeCCchhh--HHHHHHHHHc--CCcEEEECCCCCCHHHH
Confidence 45 79999999995443 3343333332 22366555555665543
No 301
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=97.09 E-value=0.00046 Score=69.13 Aligned_cols=77 Identities=21% Similarity=0.173 Sum_probs=52.2
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc-C
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF-K 386 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~-~ 386 (724)
||+|||+|.||..++..+.+.|++| .+||+++. .++ ..+++ +.+ .
T Consensus 2 ~vgiIG~G~mG~~~~~~l~~~g~~lv~v~d~~~~-~~~-------------------------------~~~~~~~l~~~ 49 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLERNGFEIAAILDVRGE-HEK-------------------------------MVRGIDEFLQR 49 (236)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEECSSCC-CTT-------------------------------EESSHHHHTTS
T ss_pred EEEEECCCHHHHHHHHHHhcCCCEEEEEEecCcc-hhh-------------------------------hcCCHHHHhcC
Confidence 7999999999999999999999997 69998852 110 12333 234 6
Q ss_pred CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 387 DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 387 ~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
++|+||+|+|. ..-.++.. ..+..+..+++.+
T Consensus 50 ~~DvVv~~~~~--~~~~~~~~---~~l~~G~~vv~~~ 81 (236)
T 2dc1_A 50 EMDVAVEAASQ--QAVKDYAE---KILKAGIDLIVLS 81 (236)
T ss_dssp CCSEEEECSCH--HHHHHHHH---HHHHTTCEEEESC
T ss_pred CCCEEEECCCH--HHHHHHHH---HHHHCCCcEEEEC
Confidence 89999999993 33333333 3334555555443
No 302
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=97.09 E-value=0.00032 Score=75.70 Aligned_cols=85 Identities=20% Similarity=0.169 Sum_probs=59.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.+|.++|..+...|.+|+++|+++.....+. ..| ... .++ +.+++
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-----------~~G-------------~~~-~sL~eal~~ 266 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQAA-----------MEG-------------YQV-LLVEDVVEE 266 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CEE-CCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-----------HhC-------------Cee-cCHHHHHhh
Confidence 6899999999999999999999999999999987654321 111 111 233 56889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
||+||.+.....-+. .+..+.++++++|+..
T Consensus 267 ADVVilt~gt~~iI~----~e~l~~MK~gAIVINv 297 (436)
T 3h9u_A 267 AHIFVTTTGNDDIIT----SEHFPRMRDDAIVCNI 297 (436)
T ss_dssp CSEEEECSSCSCSBC----TTTGGGCCTTEEEEEC
T ss_pred CCEEEECCCCcCccC----HHHHhhcCCCcEEEEe
Confidence 999998654211111 2344567889887643
No 303
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.08 E-value=0.00082 Score=71.68 Aligned_cols=151 Identities=12% Similarity=0.067 Sum_probs=92.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
+||+|||.|.-|.+-|.+|...|.+|++--|.....+. . +.+.+..+.| ....+-.++++.|
T Consensus 38 K~IaVIGyGsQG~AqAlNLRDSGv~V~Vglr~~s~~e~-~----~S~~~A~~~G-------------f~v~~~~eA~~~A 99 (491)
T 3ulk_A 38 KKVVIVGCGAQGLNQGLNMRDSGLDISYALRKEAIAEK-R----ASWRKATENG-------------FKVGTYEELIPQA 99 (491)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCEEEEEECHHHHHTT-C----HHHHHHHHTT-------------CEEEEHHHHGGGC
T ss_pred CEEEEeCCChHhHHHHhHHHhcCCcEEEEeCCCCcccc-c----chHHHHHHCC-------------CEecCHHHHHHhC
Confidence 79999999999999999999999999887663321110 0 0011112222 3333334788999
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCC--CEEEEecCCCC----------CCCCee
Q 004918 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQD--RIIGAHFFSPA----------HVMPLL 456 (724)
Q Consensus 389 DlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~--r~ig~h~~~p~----------~~~~lv 456 (724)
|+|+..+|+ +.-.+++++|.+.++++..+.- +.++.+.. .....|. .++-+-|-.|- .-.|.+
T Consensus 100 DvV~~L~PD--~~q~~vy~~I~p~lk~G~~L~f-aHGFnI~~--~~i~pp~dvdVimVAPKgpG~~VR~~y~~G~GvP~l 174 (491)
T 3ulk_A 100 DLVINLTPD--KQHSDVVRTVQPLMKDGAALGY-SHGFNIVE--VGEQIRKDITVVMVAPKCPGTEVREEYKRGFGVPTL 174 (491)
T ss_dssp SEEEECSCG--GGHHHHHHHHGGGSCTTCEEEE-SSCHHHHT--TCCCCCTTSEEEEEEESSCHHHHHHHHHTTCCCCEE
T ss_pred CEEEEeCCh--hhHHHHHHHHHhhCCCCCEEEe-cCcccccc--cccccCCCcceEEeCCCCCcHHHHHHHHcCCCCceE
Confidence 999999994 4556789999999999998753 44544432 2222222 23333332111 122333
Q ss_pred eEec-CCCCCHHHHHHHHHHHHHcCCe
Q 004918 457 EIVR-TERTSAQVILDLMTVGKIIKKV 482 (724)
Q Consensus 457 eii~-~~~t~~e~~~~~~~l~~~lGk~ 482 (724)
..|- ....+..+.+.+..+...+|..
T Consensus 175 iAVhqeqD~sG~a~~~AlayA~aiG~~ 201 (491)
T 3ulk_A 175 IAVHPENDPKGEGMAIAKAWAAATGGH 201 (491)
T ss_dssp EEECGGGCTTSCHHHHHHHHHHHHTGG
T ss_pred EEEEeCCCCchhHHHHHHHHHHhcCCC
Confidence 3331 1233556788888999999864
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.08 E-value=0.0027 Score=58.72 Aligned_cols=38 Identities=8% Similarity=0.010 Sum_probs=33.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCC-HHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVN-SEYLLK 346 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~-~~~~~~ 346 (724)
++|.|+|+|.+|..++..|.+.|++|+++|++ ++..+.
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 57999999999999999999999999999998 455443
No 305
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=97.05 E-value=0.00016 Score=73.15 Aligned_cols=37 Identities=16% Similarity=0.144 Sum_probs=34.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHH
Q 004918 310 KVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~ 346 (724)
+|.|||+|.||.+++..|++.|. +|++++|+++++++
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 79999999999999999999998 99999999987554
No 306
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.04 E-value=0.00032 Score=72.85 Aligned_cols=40 Identities=18% Similarity=0.205 Sum_probs=36.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~ 348 (724)
++|.|||+|.||.+++..|++.|. +|++++|++++++...
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la 182 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLV 182 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHH
T ss_pred CEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 589999999999999999999998 9999999998876643
No 307
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=97.03 E-value=0.00047 Score=72.65 Aligned_cols=100 Identities=21% Similarity=0.177 Sum_probs=70.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|||||.|.+|..+|..+..-|.+|..||+....... +.+ +. ..++ +.++.
T Consensus 142 ~tvGIiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~-------------~~~-------------~~-~~~l~ell~~ 194 (334)
T 3kb6_A 142 LTLGVIGTGRIGSRVAMYGLAFGMKVLCYDVVKREDLK-------------EKG-------------CV-YTSLDELLKE 194 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-------------HTT-------------CE-ECCHHHHHHH
T ss_pred cEEEEECcchHHHHHHHhhcccCceeeecCCccchhhh-------------hcC-------------ce-ecCHHHHHhh
Confidence 68999999999999999999999999999987543111 011 11 1233 55789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC---CCHHHHhcccC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST---IDLNIVGEKTS 436 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~---~~~~~~~~~~~ 436 (724)
||+|+.++|-..+.+.-+=++....++++++|+ |++- +.-..+...+.
T Consensus 195 sDivslh~Plt~~T~~li~~~~l~~mk~~a~lI-N~aRG~iVde~aL~~aL~ 245 (334)
T 3kb6_A 195 SDVISLHVPYTKETHHMINEERISLMKDGVYLI-NTARGKVVDTDALYRAYQ 245 (334)
T ss_dssp CSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEE-ECSCGGGBCHHHHHHHHH
T ss_pred CCEEEEcCCCChhhccCcCHHHHhhcCCCeEEE-ecCccccccHHHHHHHHH
Confidence 999999999777755444455667789999886 5553 33345555554
No 308
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=97.02 E-value=0.00037 Score=74.15 Aligned_cols=104 Identities=12% Similarity=0.093 Sum_probs=63.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHh--------cCC---CCHHHHHHhhcCcc
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVT--------RGK---LTQDKANNALKMLK 377 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~--------~g~---~~~~~~~~~~~~i~ 377 (724)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+.+. . ...+. .+. ++.+....
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l-G---a~~~~l~~~~~~~~gya~~~~~~~~~~------ 254 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV-G---AQWLDLGIDAAGEGGYARELSEAERAQ------ 254 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT-T---CEECCCC-------------CHHHHHH------
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-C---CeEEeccccccccccchhhhhHHHHhh------
Confidence 689999999999999999999999999999999887765320 0 00000 000 01110000
Q ss_pred cccCc-cCcCCCCEEEEcc--cCChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 378 GVLDY-SEFKDVDMVIEAV--IESVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 378 ~~~~~-~~~~~aDlVIeav--~e~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
...++ +.++++|+||.++ |.... -.-+-++..+.++++.+|+..+
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~iPg~~a-p~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTALVPGRPA-PRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCCCTTSCC-CCCBCHHHHHTSCTTCEEEETT
T ss_pred hHHHHHHHHhcCCEEEECCCCCCccc-ceeecHHHHhcCCCCcEEEEEe
Confidence 01122 5679999999986 42111 0011245556678899887543
No 309
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.00 E-value=0.00041 Score=70.56 Aligned_cols=65 Identities=17% Similarity=0.137 Sum_probs=49.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
++|.|||+|.||.+++..|++.|.+|++++|+++++++.. ++ + +. ..+++++.++
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~----------~-------------~~-~~~~~~l~~~ 173 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL----------G-------------CD-CFMEPPKSAF 173 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH----------T-------------CE-EESSCCSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC----------C-------------Ce-EecHHHhccC
Confidence 5799999999999999999999999999999998876543 11 0 11 1123445589
Q ss_pred CEEEEcccCC
Q 004918 389 DMVIEAVIES 398 (724)
Q Consensus 389 DlVIeav~e~ 398 (724)
|+||.|+|-.
T Consensus 174 DiVInaTp~G 183 (269)
T 3phh_A 174 DLIINATSAS 183 (269)
T ss_dssp SEEEECCTTC
T ss_pred CEEEEcccCC
Confidence 9999999843
No 310
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=96.98 E-value=0.0015 Score=68.46 Aligned_cols=97 Identities=10% Similarity=0.012 Sum_probs=59.3
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHH-CCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGSG-IATAHIL-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~-iA~~la~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
++..||+|||+|.||.. ++..+.+ .|++|+ ++|+++++++...+.. | +...+++
T Consensus 3 m~~~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~ 59 (319)
T 1tlt_A 3 LKKLRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW----------R-------------IPYADSL 59 (319)
T ss_dssp --CEEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH----------T-------------CCBCSSH
T ss_pred CCcceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------C-------------CCccCcH
Confidence 34468999999999997 8888876 477876 8999998766532210 1 1123444
Q ss_pred cCc-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 383 SEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 383 ~~~-~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
+++ .++|+|+.|+|..... ++..... ..+. +++....+....+
T Consensus 60 ~~l~~~~D~V~i~tp~~~h~--~~~~~al---~~G~~v~~eKP~~~~~~~ 104 (319)
T 1tlt_A 60 SSLAASCDAVFVHSSTASHF--DVVSTLL---NAGVHVCVDKPLAENLRD 104 (319)
T ss_dssp HHHHTTCSEEEECSCTTHHH--HHHHHHH---HTTCEEEEESSSCSSHHH
T ss_pred HHhhcCCCEEEEeCCchhHH--HHHHHHH---HcCCeEEEeCCCCCCHHH
Confidence 433 6799999999955432 3333322 2343 5554444555544
No 311
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.98 E-value=0.00037 Score=74.92 Aligned_cols=98 Identities=19% Similarity=0.167 Sum_probs=61.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||+|.+|..+|+.+...|.+|+++|+++++++.+.+.. |.-. ........++ +.+++
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~----------g~~~-------~~~~~~~~~l~~~l~~ 231 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF----------CGRI-------HTRYSSAYELEGAVKR 231 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------TTSS-------EEEECCHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc----------CCee-------EeccCCHHHHHHHHcC
Confidence 6899999999999999999999999999999998876543211 1000 0000000111 34568
Q ss_pred CCEEEEcccCChH-HHHHHHHHHHhhCCCCcEEEecC
Q 004918 388 VDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 388 aDlVIeav~e~~~-~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
+|+||+|++-... ...-+.++..+.++++.+|+..+
T Consensus 232 aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 232 ADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 9999998842221 11111234445677888776433
No 312
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.97 E-value=0.00063 Score=72.72 Aligned_cols=88 Identities=22% Similarity=0.178 Sum_probs=57.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc--ccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG--VLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~--~~~~-~~~ 385 (724)
+||+|||+|.||..++..|++. ++|+++||+++++++..+ .... ..+.. ..++ +.+
T Consensus 17 ~~v~IiGaG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la~-----------~~~~---------~~~d~~~~~~l~~ll 75 (365)
T 2z2v_A 17 MKVLILGAGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVKE-----------FATP---------LKVDASNFDKLVEVM 75 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHTT-----------TSEE---------EECCTTCHHHHHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHHh-----------hCCe---------EEEecCCHHHHHHHH
Confidence 6899999999999999999998 999999999998776421 1100 00000 1112 346
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
+++|+||.|+|... -..+.. ..+..++.+++.
T Consensus 76 ~~~DvVIn~~P~~~--~~~v~~---a~l~~G~~~vD~ 107 (365)
T 2z2v_A 76 KEFELVIGALPGFL--GFKSIK---AAIKSKVDMVDV 107 (365)
T ss_dssp TTCSCEEECCCHHH--HHHHHH---HHHHTTCCEEEC
T ss_pred hCCCEEEECCChhh--hHHHHH---HHHHhCCeEEEc
Confidence 78999999998332 223332 333456655553
No 313
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=96.96 E-value=0.002 Score=67.91 Aligned_cols=97 Identities=15% Similarity=0.144 Sum_probs=62.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
+.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+. . .+. .+++ +.
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~----------~-------------~~~-~~~~~~~ 58 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA----------Y-------------GCE-VRTIDAI 58 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------T-------------TCE-ECCHHHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH----------h-------------CCC-cCCHHHH
Confidence 46899999999999999999885 77876 799999886654321 0 122 3444 33
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 385 ~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
++ ++|+|+.|+|.... .++.....+. ...+++....+....+..
T Consensus 59 l~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~~~~~~~~~ 104 (331)
T 4hkt_A 59 EAAADIDAVVICTPTDTH--ADLIERFARA--GKAIFCEKPIDLDAERVR 104 (331)
T ss_dssp HHCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEECSCSCSSHHHHH
T ss_pred hcCCCCCEEEEeCCchhH--HHHHHHHHHc--CCcEEEecCCCCCHHHHH
Confidence 43 79999999995443 3343333322 233555555556655433
No 314
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=96.95 E-value=0.002 Score=69.29 Aligned_cols=85 Identities=21% Similarity=0.327 Sum_probs=59.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|+|+|.+|.++|..+...|.+|+++|+++.....+. ..| .. ..++ +.++.
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-----------~~G-------------~~-v~~Leeal~~ 275 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQAC-----------MDG-------------FR-LVKLNEVIRQ 275 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-----------HTT-------------CE-ECCHHHHTTT
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-----------HcC-------------CE-eccHHHHHhc
Confidence 6899999999999999999999999999999987544321 111 11 1223 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
+|+||.| ++...+.. .+....++++++|+..
T Consensus 276 ADIVi~a-tgt~~lI~---~e~l~~MK~gailINv 306 (435)
T 3gvp_A 276 VDIVITC-TGNKNVVT---REHLDRMKNSCIVCNM 306 (435)
T ss_dssp CSEEEEC-SSCSCSBC---HHHHHHSCTTEEEEEC
T ss_pred CCEEEEC-CCCcccCC---HHHHHhcCCCcEEEEe
Confidence 9999997 44333211 2344557888887643
No 315
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=96.94 E-value=0.0028 Score=66.51 Aligned_cols=96 Identities=15% Similarity=0.004 Sum_probs=59.6
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHC-CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc-
Q 004918 309 RKVAVIGGGLMGS-GIATAHILN-NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF- 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~-~iA~~la~~-G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~- 385 (724)
.||+|||+|.||. .++..+.+. +++|+++|++++++++..+. .|. .....++.+.+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~~~a~~----------~g~-----------~~~~~~~~~~l~ 61 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATR----------YRV-----------SATCTDYRDVLQ 61 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHH----------TTC-----------CCCCSSTTGGGG
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHH----------cCC-----------CccccCHHHHhh
Confidence 5899999999998 488888764 77888999999887654321 010 00023333555
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCC-cEEEecCCCCCHHH
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNI 430 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~-~ii~s~ts~~~~~~ 430 (724)
.++|+|++|+|... -.++..+..+ .+ .+++....+.+..+
T Consensus 62 ~~~D~V~i~tp~~~--h~~~~~~al~---~Gk~V~~EKP~~~~~~~ 102 (323)
T 1xea_A 62 YGVDAVMIHAATDV--HSTLAAFFLH---LGIPTFVDKPLAASAQE 102 (323)
T ss_dssp GCCSEEEECSCGGG--HHHHHHHHHH---TTCCEEEESCSCSSHHH
T ss_pred cCCCEEEEECCchh--HHHHHHHHHH---CCCeEEEeCCCcCCHHH
Confidence 68999999999433 3344433222 23 25554444555544
No 316
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=96.93 E-value=0.00071 Score=72.55 Aligned_cols=99 Identities=17% Similarity=0.215 Sum_probs=59.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
++|+|+|+|.+|..+++.+...|.+|+++|+++++++.+.+... ..+.....+..+.. +.++++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g----~~~~~~~~~~~~l~------------~~~~~~ 230 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG----GRVITLTATEANIK------------KSVQHA 230 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT----TSEEEEECCHHHHH------------HHHHHC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC----ceEEEecCCHHHHH------------HHHhCC
Confidence 68999999999999999999999999999999987765432110 00000000111111 335689
Q ss_pred CEEEEcccCCh-HHHHHHHHHHHhhCCCCcEEEecC
Q 004918 389 DMVIEAVIESV-PLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 389 DlVIeav~e~~-~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
|+||+|++-.. ....-+.++..+.++++.+|+..+
T Consensus 231 DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp SEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99999997332 111112344455667777665433
No 317
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.92 E-value=0.00033 Score=75.20 Aligned_cols=40 Identities=18% Similarity=0.133 Sum_probs=36.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
.||+|||+|.||..+|+.+...|.+|+++|+++++++.+.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 5899999999999999999999999999999998876653
No 318
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=96.89 E-value=0.0013 Score=70.90 Aligned_cols=88 Identities=18% Similarity=0.238 Sum_probs=60.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~~ 387 (724)
++|+|||.|.+|..+|..+...|.+|+++|+++.....+. ..| ... .++ +.++.
T Consensus 248 KTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-----------~~G-------------~~v-v~LeElL~~ 302 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQAA-----------MDG-------------FEV-VTLDDAAST 302 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-----------HTT-------------CEE-CCHHHHGGG
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-----------hcC-------------cee-ccHHHHHhh
Confidence 6899999999999999999999999999999987543321 111 111 123 56789
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTI 426 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~ 426 (724)
||+|+.+....--+. .+....++++++|+ |++..
T Consensus 303 ADIVv~atgt~~lI~----~e~l~~MK~GAILI-NvGRg 336 (464)
T 3n58_A 303 ADIVVTTTGNKDVIT----IDHMRKMKDMCIVG-NIGHF 336 (464)
T ss_dssp CSEEEECCSSSSSBC----HHHHHHSCTTEEEE-ECSSS
T ss_pred CCEEEECCCCccccC----HHHHhcCCCCeEEE-EcCCC
Confidence 999999864221112 34445678998886 55543
No 319
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.87 E-value=0.00093 Score=68.62 Aligned_cols=41 Identities=10% Similarity=0.098 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~ 349 (724)
++|.|+|+|.||.+++..|++.|. +|++++|+++++++..+
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~ 168 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAE 168 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHH
Confidence 689999999999999999999996 99999999988776543
No 320
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=96.85 E-value=0.0031 Score=66.16 Aligned_cols=95 Identities=13% Similarity=0.029 Sum_probs=60.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc-Cc
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 385 (724)
.||+|||+|.||..++..+.+. ++++ .++|+++++++...+ +.| .....++++ .+
T Consensus 2 ~~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~~~~~~----------~~~------------~~~~~~~~~~~l 59 (325)
T 2ho3_A 2 LKLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETAATFAS----------RYQ------------NIQLFDQLEVFF 59 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHHHHHGG----------GSS------------SCEEESCHHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHH----------HcC------------CCeEeCCHHHHh
Confidence 4899999999999999999876 5665 488999987654211 111 122345553 34
Q ss_pred -CCCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 386 -~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
.++|+|++|+|... -.++..+..+ .+. +++-...+....+
T Consensus 60 ~~~~D~V~i~tp~~~--h~~~~~~al~---~gk~V~~EKP~~~~~~~ 101 (325)
T 2ho3_A 60 KSSFDLVYIASPNSL--HFAQAKAALS---AGKHVILEKPAVSQPQE 101 (325)
T ss_dssp TSSCSEEEECSCGGG--HHHHHHHHHH---TTCEEEEESSCCSSHHH
T ss_pred CCCCCEEEEeCChHH--HHHHHHHHHH---cCCcEEEecCCcCCHHH
Confidence 68999999999443 2344333322 333 5554444555543
No 321
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.84 E-value=0.0021 Score=65.58 Aligned_cols=40 Identities=20% Similarity=0.084 Sum_probs=36.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~ 348 (724)
++|.|||+|.||.+++..|+..|. +|++++|+.++++...
T Consensus 120 ~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la 160 (271)
T 1npy_A 120 AKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLA 160 (271)
T ss_dssp SCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 579999999999999999999997 8999999998876643
No 322
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=96.81 E-value=0.0026 Score=67.71 Aligned_cols=97 Identities=20% Similarity=0.153 Sum_probs=62.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCc
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~ 385 (724)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. | +...+++ +.+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~----------g-------------~~~~~~~~~~l 62 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRY----------N-------------CAGDATMEALL 62 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHH----------T-------------CCCCSSHHHHH
T ss_pred ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHc----------C-------------CCCcCCHHHHh
Confidence 5899999999999999999877 78855 8899998876643210 1 2223454 334
Q ss_pred --CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 386 --KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 386 --~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
.++|+|+.|+|..... ++.....+. ...+++....+....+..
T Consensus 63 ~~~~~D~V~i~tp~~~h~--~~~~~al~~--gk~vl~EKP~~~~~~~~~ 107 (354)
T 3db2_A 63 AREDVEMVIITVPNDKHA--EVIEQCARS--GKHIYVEKPISVSLDHAQ 107 (354)
T ss_dssp HCSSCCEEEECSCTTSHH--HHHHHHHHT--TCEEEEESSSCSSHHHHH
T ss_pred cCCCCCEEEEeCChHHHH--HHHHHHHHc--CCEEEEccCCCCCHHHHH
Confidence 5799999999965543 333332221 233565555556555433
No 323
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.81 E-value=0.0013 Score=67.44 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=37.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|+|+|.||.+++..|++.|.+|++++|+++++++..+
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~ 160 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAE 160 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 68999999999999999999999999999999988776543
No 324
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=96.80 E-value=0.0025 Score=67.54 Aligned_cols=97 Identities=18% Similarity=0.218 Sum_probs=61.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc-Cc
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EF 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~ 385 (724)
.||+|||+|.||..++..+.+. +++|+ ++|+++++++...+.. +.....++++ .+
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~----------------------~~~~~~~~~~~ll 60 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKL----------------------GVEKAYKDPHELI 60 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHH----------------------TCSEEESSHHHHH
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHh----------------------CCCceeCCHHHHh
Confidence 5899999999999999999875 67766 7899998876543211 1112344553 34
Q ss_pred C--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 386 K--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 386 ~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
+ ++|+|+.|+|.... .++.....+. ...+++-...+..+.+.
T Consensus 61 ~~~~~D~V~i~tp~~~h--~~~~~~al~~--gk~v~~EKP~~~~~~e~ 104 (344)
T 3ezy_A 61 EDPNVDAVLVCSSTNTH--SELVIACAKA--KKHVFCEKPLSLNLADV 104 (344)
T ss_dssp HCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEEESCSCSCHHHH
T ss_pred cCCCCCEEEEcCCCcch--HHHHHHHHhc--CCeEEEECCCCCCHHHH
Confidence 4 79999999995433 3333333222 22355555555665543
No 325
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=96.80 E-value=0.0028 Score=66.18 Aligned_cols=93 Identities=20% Similarity=0.114 Sum_probs=59.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
..||+|||+|.||..++..+.+. ++++ .++|+++++++...+ .+...+++ +.
T Consensus 10 ~~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~~~~~~-------------------------~~~~~~~~~~~ 64 (315)
T 3c1a_A 10 PVRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNLALVPP-------------------------GCVIESDWRSV 64 (315)
T ss_dssp CEEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHHTTCCT-------------------------TCEEESSTHHH
T ss_pred cceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHh-------------------------hCcccCCHHHH
Confidence 45899999999999999999886 6664 589999886543210 02234455 33
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 385 ~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
++ ++|+|++|+|.... .++..+.. ..+. +++....+....+
T Consensus 65 l~~~~~D~V~i~tp~~~h--~~~~~~al---~~Gk~v~~eKP~~~~~~~ 108 (315)
T 3c1a_A 65 VSAPEVEAVIIATPPATH--AEITLAAI---ASGKAVLVEKPLTLDLAE 108 (315)
T ss_dssp HTCTTCCEEEEESCGGGH--HHHHHHHH---HTTCEEEEESSSCSCHHH
T ss_pred hhCCCCCEEEEeCChHHH--HHHHHHHH---HCCCcEEEcCCCcCCHHH
Confidence 43 79999999994433 34443332 2333 5554455555543
No 326
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=96.78 E-value=0.016 Score=64.40 Aligned_cols=139 Identities=15% Similarity=0.102 Sum_probs=91.6
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.-++.....+.+..+++.+..+ .+-+|.|+. |.|+.+.+-... ...+.+...... + + .-..|.|++
T Consensus 108 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~~-----SGGARmqeg~~s-----l~~~~~i~~~~~-~-~-s~~iP~Isv 173 (523)
T 1on3_A 108 GGSAGETQSTKVVETMEQALLT-GTPFLFFYD-----SGGARIQEGIDS-----LSGYGKMFFANV-K-L-SGVVPQIAI 173 (523)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEE-----ECSBCGGGTHHH-----HHHHHHHHHHHH-H-H-TTTSCEEEE
T ss_pred CCcCcHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhhHHHH-----HHHHHHHHHHHH-H-h-cCCCCEEEE
Confidence 4789999999999999988765 466777764 455555432110 001111111111 1 2 344999999
Q ss_pred ECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHH-----HHH--HC
Q 004918 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--KL 177 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~-----eA~--~~ 177 (724)
+.|+|.||+......||++|+.+++.+++. |+..... .+|+.++.+ +.+ +.
T Consensus 174 v~gp~~GG~a~s~~l~D~ii~~~~a~i~~a--------------------GP~vI~~--~~ge~~~~e~lggae~h~~~~ 231 (523)
T 1on3_A 174 IAGPCAGGASYSPALTDFIIMTKKAHMFIT--------------------GPQVIKS--VTGEDVTADELGGAEAHMAIS 231 (523)
T ss_dssp EEEEEESGGGHHHHHSSEEEEETTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHSHHHHHHTT
T ss_pred EcCCCchHHHHHHhhCCeEEEeCCCEEEec--------------------CHHHHHH--HhCCcCChHhcccHHHHhhcc
Confidence 999999999999999999999988887754 2222211 457777764 323 69
Q ss_pred CCcceecCcc-hHHHHHHHHHHH
Q 004918 178 GLIDAVVTSE-ELLKVSRLWALD 199 (724)
Q Consensus 178 Glv~~vv~~~-~l~~~a~~~a~~ 199 (724)
|++|.+++++ ++.+.+.++...
T Consensus 232 G~vd~vv~d~~~~~~~~r~lL~~ 254 (523)
T 1on3_A 232 GNIHFVAEDDDAAELIAKKLLSF 254 (523)
T ss_dssp CCCSEEESSHHHHHHHHHHHHHT
T ss_pred CceEEEeCCHHHHHHHHHHHHHh
Confidence 9999999854 455555555443
No 327
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=96.76 E-value=0.03 Score=62.19 Aligned_cols=141 Identities=15% Similarity=0.084 Sum_probs=90.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
--++.+...+.+..+++.+... .+-+|.|.-.|+ +.+.+-..... ....+.... ..+ ..+.....|+|++
T Consensus 134 gGS~g~~~~~Ki~ra~e~A~~~-~lPvI~l~dSgG-----ARl~~q~~~~~--~~~~~~~i~-~~~-~~ls~~giP~Isv 203 (555)
T 3u9r_B 134 GGTYYPLTVKKHLRAQAIALEN-RLPCIYLVDSGG-----ANLPRQDEVFP--DREHFGRIF-FNQ-ANMSARGIPQIAV 203 (555)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGGGGTSS--STTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHc-CCCEEEEECCCC-----CCCCCcceeec--ccccHHHHH-HHH-HHHhcCCCCEEEE
Confidence 3689999999999999988865 456777764333 33321111000 001122212 222 2355678999999
Q ss_pred ECccccchhHHHHhhcCEEEEeC-CceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHHHH-------HH
Q 004918 105 VEGLALGGGLELAMGCHARIAAP-KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEG-------WK 176 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~-~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~eA-------~~ 176 (724)
|.|.|.|||......||++|+.+ ++.+++ -|+... + ..+|+.+++++. ..
T Consensus 204 v~G~~~GGga~~~a~~d~vim~e~~a~i~~--------------------aGP~vi-k-~~~ge~~~~e~LGGa~~h~~~ 261 (555)
T 3u9r_B 204 VMGSCTAGGAYVPAMSDETVMVREQATIFL--------------------AGPPLV-K-AATGEVVSAEELGGADVHCKV 261 (555)
T ss_dssp ECSCCBGGGGHHHHTSSEEEEETTTCBCBS--------------------SCHHHH-H-HHHCCCCCHHHHHBHHHHHHT
T ss_pred EecCCCccHHHHHHhCCceEEecCCceEEE--------------------ccHHHH-H-HHhcCccChhhccchhhhhhc
Confidence 99999999999999999999875 454432 121111 1 167899999998 88
Q ss_pred CCCcceecCcchHHHHHHHHHHHH
Q 004918 177 LGLIDAVVTSEELLKVSRLWALDI 200 (724)
Q Consensus 177 ~Glv~~vv~~~~l~~~a~~~a~~l 200 (724)
.|++|.++++++ .+.+.++++
T Consensus 262 sGv~d~v~~de~---~a~~~~r~~ 282 (555)
T 3u9r_B 262 SGVADHYAEDDD---HALAIARRC 282 (555)
T ss_dssp TCSCSEEESSHH---HHHHHHHHH
T ss_pred cCceeEEeCCHH---HHHHHHHHH
Confidence 999999997664 344444443
No 328
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=96.74 E-value=0.019 Score=63.89 Aligned_cols=135 Identities=15% Similarity=0.044 Sum_probs=89.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHh--cCCCcEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE--DCKKPIV 102 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~kp~I 102 (724)
.-++.....+.+..+++.+..+ .+-+|.|.- |.|+.+.+-.. .+.. +.+.+ .++. .-..|.|
T Consensus 121 gGS~g~~~~~Ki~ra~e~A~~~-~lP~I~l~d-----SGGARmqeg~~--------sl~~-~~~i~-~~~~~~s~~iP~I 184 (548)
T 2bzr_A 121 GGSLGEVYGEKIVKVQELAIKT-GRPLIGIND-----GAGARIQEGVV--------SLGL-YSRIF-RNNILASGVIPQI 184 (548)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSCCGGGTTH--------HHHH-HHHHH-HHHHHTTTTSCEE
T ss_pred cCCCChhHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCCchhHHH--------HHHH-HHHHH-HHHHHhcCCCcEE
Confidence 4789999999999999988765 566777765 45555543211 0111 11222 1122 3349999
Q ss_pred EEECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHH-----HH--
Q 004918 103 AAVEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EG-- 174 (724)
Q Consensus 103 aav~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~-----eA-- 174 (724)
+++.|+|.||+......||++|+.++ +.+++. |+..... .+|+.++.+ +.
T Consensus 185 svv~gp~~GG~a~s~al~D~ii~~~~~a~i~~a--------------------GP~vI~~--~~ge~v~~e~lggae~h~ 242 (548)
T 2bzr_A 185 SLIMGAAAGGHVYSPALTDFVIMVDQTSQMFIT--------------------GPDVIKT--VTGEEVTMEELGGAHTHM 242 (548)
T ss_dssp EEECSEEESGGGHHHHHSSEEEEETTTCEEESS--------------------CHHHHHH--HHCCCCCHHHHHBHHHHH
T ss_pred EEecCCCchHHHHHHHhCCeEEeccCceeEEec--------------------cHHHHHH--HhCCcCChHhcccHHHHh
Confidence 99999999999988889999999986 777654 3222211 457788764 22
Q ss_pred HHCCCcceecCcc-hHHHHHHHHH
Q 004918 175 WKLGLIDAVVTSE-ELLKVSRLWA 197 (724)
Q Consensus 175 ~~~Glv~~vv~~~-~l~~~a~~~a 197 (724)
.+.|++|.+++++ ++.+.+.++.
T Consensus 243 ~~sG~~d~vv~d~~~~~~~~r~ll 266 (548)
T 2bzr_A 243 AKSGTAHYAASGEQDAFDYVRELL 266 (548)
T ss_dssp HTSSCCSEEESSHHHHHHHHHHHH
T ss_pred hccCceeEEeCCHHHHHHHHHHHH
Confidence 3699999999754 3444444443
No 329
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=96.73 E-value=0.0035 Score=66.86 Aligned_cols=98 Identities=19% Similarity=0.152 Sum_probs=60.8
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
+.-||+|||+|.||...+..+.+. +++|+ ++|+++++++.+. +.| +...+++++
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-----------~~g-------------~~~~~~~~~ 59 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-----------QKG-------------LKIYESYEA 59 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-----------TTT-------------CCBCSCHHH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-----------hcC-------------CceeCCHHH
Confidence 345899999999999999988876 67765 6799998754321 111 233455533
Q ss_pred -cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 385 -FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 385 -~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
++ ++|+|+.|+|..... ++..+..+. ...+++-...+....+..
T Consensus 60 ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--GkhVl~EKP~a~~~~ea~ 106 (359)
T 3e18_A 60 VLADEKVDAVLIATPNDSHK--ELAISALEA--GKHVVCEKPVTMTSEDLL 106 (359)
T ss_dssp HHHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSCCSSHHHHH
T ss_pred HhcCCCCCEEEEcCCcHHHH--HHHHHHHHC--CCCEEeeCCCcCCHHHHH
Confidence 33 789999999954432 333333221 223555544455555433
No 330
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=96.72 E-value=0.0019 Score=66.07 Aligned_cols=40 Identities=13% Similarity=0.121 Sum_probs=36.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
++|.|+|+|.||.+++..|++.|.+|++++|++++++...
T Consensus 120 k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la 159 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELA 159 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH
Confidence 5899999999999999999999999999999998876543
No 331
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.72 E-value=0.0034 Score=66.68 Aligned_cols=100 Identities=18% Similarity=0.091 Sum_probs=61.6
Q ss_pred CCCcceEEEEcCCCCcH-HHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC
Q 004918 305 PRGVRKVAVIGGGLMGS-GIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (724)
Q Consensus 305 ~~~~~kI~VIG~G~mG~-~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (724)
+|+..||+|||+|.||. .++..+.+. +++|+ ++|++++++++..+.. | +...++
T Consensus 24 ~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~----------g-------------~~~~~~ 80 (350)
T 3rc1_A 24 NANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF----------G-------------GEPVEG 80 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH----------C-------------SEEEES
T ss_pred CCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc----------C-------------CCCcCC
Confidence 34456899999999998 788888887 77775 7899998866543211 1 222345
Q ss_pred cc-Cc--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 382 YS-EF--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 382 ~~-~~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
++ .+ .++|+|+.|+|..... ++.....+. ...+++--.-+....+.
T Consensus 81 ~~~ll~~~~~D~V~i~tp~~~h~--~~~~~al~a--Gk~Vl~EKP~a~~~~ea 129 (350)
T 3rc1_A 81 YPALLERDDVDAVYVPLPAVLHA--EWIDRALRA--GKHVLAEKPLTTDRPQA 129 (350)
T ss_dssp HHHHHTCTTCSEEEECCCGGGHH--HHHHHHHHT--TCEEEEESSSCSSHHHH
T ss_pred HHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHC--CCcEEEeCCCCCCHHHH
Confidence 53 33 3689999999955443 343333322 22355544445555543
No 332
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=96.71 E-value=0.00047 Score=72.63 Aligned_cols=98 Identities=18% Similarity=0.147 Sum_probs=64.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCC--c-----EEEEeCCH--HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc
Q 004918 309 RKVAVIG-GGLMGSGIATAHILNNI--Y-----VVLKEVNS--EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (724)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~la~~G~--~-----V~l~d~~~--~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (724)
.||+|+| +|.+|.++|..|+..|. + ++++|+++ +.++....++.+ .... ....+..
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~--------~~~~------~~~~~~~ 69 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQD--------CALP------LLKDVIA 69 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH--------TCCT------TEEEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHh--------hhhc------ccCCEEE
Confidence 5899999 79999999999999887 6 99999975 233322111111 0000 1122333
Q ss_pred ccC-ccCcCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCcEEE
Q 004918 379 VLD-YSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 379 ~~~-~~~~~~aDlVIeav--~e------------~~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
+++ ++++++||+||.+. |. +..+.+++...+.++.+++.+++
T Consensus 70 ~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vi 126 (333)
T 5mdh_A 70 TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVI 126 (333)
T ss_dssp ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEE
T ss_pred cCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 444 57899999999875 21 34566777788888887765333
No 333
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=96.71 E-value=0.0058 Score=64.61 Aligned_cols=97 Identities=13% Similarity=0.153 Sum_probs=59.4
Q ss_pred CcceEEEEcCCCCcHHHHHHHH-H-CCCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 307 GVRKVAVIGGGLMGSGIATAHI-L-NNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la-~-~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
++.||+|||+|.||..++..+. + .|++| .++|+++++++...+ +.| .....++++
T Consensus 7 ~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~----------~~g------------~~~~~~~~~ 64 (346)
T 3cea_A 7 KPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKN----------ELG------------VETTYTNYK 64 (346)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHH----------TTC------------CSEEESCHH
T ss_pred CcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHH----------HhC------------CCcccCCHH
Confidence 4568999999999999999988 4 47774 578999987665321 011 112234453
Q ss_pred -CcC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 384 -EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 384 -~~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
.++ ++|+|++|+|.... .++..... ..+. +++....+....+
T Consensus 65 ~~l~~~~~D~V~i~tp~~~h--~~~~~~al---~~G~~v~~eKp~~~~~~~ 110 (346)
T 3cea_A 65 DMIDTENIDAIFIVAPTPFH--PEMTIYAM---NAGLNVFCEKPLGLDFNE 110 (346)
T ss_dssp HHHTTSCCSEEEECSCGGGH--HHHHHHHH---HTTCEEEECSCCCSCHHH
T ss_pred HHhcCCCCCEEEEeCChHhH--HHHHHHHH---HCCCEEEEcCCCCCCHHH
Confidence 343 69999999994433 23333322 2344 4443344555554
No 334
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=96.67 E-value=0.0015 Score=67.11 Aligned_cols=43 Identities=16% Similarity=0.286 Sum_probs=38.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i 351 (724)
+++.|+|+|.+|.+++..|++.|. +|++++|++++++...+.+
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~ 171 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHH
Confidence 689999999999999999999998 6999999999887765544
No 335
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.67 E-value=0.04 Score=61.17 Aligned_cols=147 Identities=15% Similarity=0.089 Sum_probs=95.0
Q ss_pred EEeCCCC--CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHh
Q 004918 18 ITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (724)
Q Consensus 18 i~l~~p~--~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (724)
+.-+... .-++.....+.+..+++.+..+ .+-+|.|+. |.|+.+.+-... ...+.+...... + +
T Consensus 95 v~a~D~t~~gGS~g~~~~~Ki~ra~e~A~~~-~~P~I~l~~-----SGGaRmqeg~~s-----l~~~~~i~~~~~-~-~- 160 (522)
T 1x0u_A 95 AYAQDFTVLGGSLGETHANKIVRAYELALKV-GAPVVGIND-----SGGARIQEGALS-----LEGYGAVFKMNV-M-A- 160 (522)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEC-----CCSBCGGGTHHH-----HHHHHHHHHHHH-H-H-
T ss_pred EEEecCceeCccccHHHHHHHHHHHHHHHHc-CCCEEEEEc-----CCCCChhHHHHH-----HHHHHHHHHHHH-H-h-
Confidence 3334443 4689999999999999988765 566777775 455655432110 001111111111 1 2
Q ss_pred cCCCcEEEEECccccchhHHHHhhcCEEEEeCC-c-eeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHH-
Q 004918 96 DCKKPIVAAVEGLALGGGLELAMGCHARIAAPK-T-QLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE- 172 (724)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~lalacD~ria~~~-a-~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~- 172 (724)
.-..|.|+++.|+|.||+......||++|+.++ + .+++ -|+.... ..+|+.++.+
T Consensus 161 s~~iP~Isvv~gp~~GG~a~s~~l~D~~i~~~~~a~~i~~--------------------aGP~vI~--~~~ge~~~~e~ 218 (522)
T 1x0u_A 161 SGVIPQITIMAGPAAGGAVYSPALTDFIIMIKGDAYYMFV--------------------TGPEITK--VVLGEEVSFQD 218 (522)
T ss_dssp TTTSCEEEEECSEEEGGGGHHHHHSSEEEEECSTTCEEES--------------------SCHHHHH--HTTCCCCCHHH
T ss_pred CCCCcEEEEEcCCCchHHHHHHhcCCeEEEecCCccEEEe--------------------cCHHHHH--HHhCCcCChhh
Confidence 345999999999999999999999999999987 7 6665 1221111 1567777764
Q ss_pred ----HHH--HCCCcceecCc-chHHHHHHHHHHHH
Q 004918 173 ----EGW--KLGLIDAVVTS-EELLKVSRLWALDI 200 (724)
Q Consensus 173 ----eA~--~~Glv~~vv~~-~~l~~~a~~~a~~l 200 (724)
+.+ +.|++|.++++ .++.+.+.++...+
T Consensus 219 lggae~~~~~~G~~d~vv~~~~~~~~~~~~ll~~l 253 (522)
T 1x0u_A 219 LGGAVVHATKSGVVHFMVDSEQEAINLTKRLLSYL 253 (522)
T ss_dssp HHBHHHHHHTTCCCSEEESCHHHHHHHHHHHHHHS
T ss_pred cchHHHHhhcCceeEEEeCCHHHHHHHHHHHHHhc
Confidence 223 69999999985 45666666665544
No 336
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=96.59 E-value=0.0068 Score=63.69 Aligned_cols=94 Identities=16% Similarity=0.082 Sum_probs=57.8
Q ss_pred eEEEEcCCCCcHHH-HHHHHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc-CcC
Q 004918 310 KVAVIGGGLMGSGI-ATAHILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS-EFK 386 (724)
Q Consensus 310 kI~VIG~G~mG~~i-A~~la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~~~ 386 (724)
||+|||+|.||..+ +..+.+.|++|+ ++|++++++++..+. .| .....++++ .++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~----------~g------------~~~~~~~~~~~l~ 59 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATE----------NG------------IGKSVTSVEELVG 59 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------TT------------CSCCBSCHHHHHT
T ss_pred eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHH----------cC------------CCcccCCHHHHhc
Confidence 79999999999998 777777788865 789999876653221 11 111234443 333
Q ss_pred --CCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 387 --DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 387 --~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
++|+|++|+|.... .++..... ..+. +++....+....+
T Consensus 60 ~~~~D~V~i~tp~~~h--~~~~~~al---~~Gk~v~~ekP~~~~~~~ 101 (332)
T 2glx_A 60 DPDVDAVYVSTTNELH--REQTLAAI---RAGKHVLCEKPLAMTLED 101 (332)
T ss_dssp CTTCCEEEECSCGGGH--HHHHHHHH---HTTCEEEECSSSCSSHHH
T ss_pred CCCCCEEEEeCChhHh--HHHHHHHH---HCCCeEEEeCCCcCCHHH
Confidence 59999999994433 33333332 2344 4443334455544
No 337
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=96.58 E-value=0.0047 Score=56.31 Aligned_cols=82 Identities=13% Similarity=0.063 Sum_probs=56.4
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 309 ~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
++|+|||+ |.||..++.+|.+.||+ +|++|+..... ....+.+..++++
T Consensus 14 ~~vaVvGas~~~g~~G~~~~~~l~~~G~~--v~~vnp~~~~~-------------------------~i~G~~~~~sl~e 66 (140)
T 1iuk_A 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYR--VLPVNPRFQGE-------------------------ELFGEEAVASLLD 66 (140)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCE--EEEECGGGTTS-------------------------EETTEECBSSGGG
T ss_pred CEEEEECCCCCCCChHHHHHHHHHHCCCE--EEEeCCCcccC-------------------------cCCCEEecCCHHH
Confidence 57999999 89999999999999997 67777763110 0012333444544
Q ss_pred c-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEE
Q 004918 385 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 385 ~-~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
+ ...|+++.++| .+...++++++.+.-.. .+++
T Consensus 67 l~~~vDlavi~vp--~~~~~~v~~~~~~~gi~-~i~~ 100 (140)
T 1iuk_A 67 LKEPVDILDVFRP--PSALMDHLPEVLALRPG-LVWL 100 (140)
T ss_dssp CCSCCSEEEECSC--HHHHTTTHHHHHHHCCS-CEEE
T ss_pred CCCCCCEEEEEeC--HHHHHHHHHHHHHcCCC-EEEE
Confidence 4 46899999999 67777777776654333 4543
No 338
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.58 E-value=0.0026 Score=64.93 Aligned_cols=41 Identities=17% Similarity=0.168 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~ 349 (724)
+++.|+|+|.+|.+++..|++.|. +|++++|+++++++..+
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~ 162 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRN 162 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHH
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 689999999999999999999996 99999999998776543
No 339
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.55 E-value=0.00037 Score=71.39 Aligned_cols=38 Identities=13% Similarity=0.117 Sum_probs=34.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLK 346 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~ 346 (724)
++|.|||+|.||.+++..|++.|. +|++++|+++++++
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~ 156 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNN 156 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTT
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence 579999999999999999999999 99999999886543
No 340
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.55 E-value=0.0032 Score=66.94 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=35.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|+|+|+|.||..+|..|...|.+|+++|++++.+++.
T Consensus 174 ktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~ 212 (364)
T 1leh_A 174 LAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAA 212 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 689999999999999999999999999999999876654
No 341
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.53 E-value=0.0032 Score=63.42 Aligned_cols=33 Identities=15% Similarity=0.311 Sum_probs=31.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 341 (724)
++|.|||+|.+|+.+|..|++.|. +++++|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 579999999999999999999998 899999987
No 342
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.52 E-value=0.0058 Score=64.64 Aligned_cols=97 Identities=15% Similarity=0.137 Sum_probs=60.3
Q ss_pred ceEEEEcCCCCcHHHHHHHH-H-CCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-
Q 004918 309 RKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la-~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 384 (724)
.||+|||+|.||...+..+. + .+++|+ ++|+++++++...+. .|. .....+++++
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~~~~~~~----------~g~-----------~~~~~~~~~~l 61 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAAQKVVEQ----------YQL-----------NATVYPNDDSL 61 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHHHHHHHH----------TTC-----------CCEEESSHHHH
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hCC-----------CCeeeCCHHHH
Confidence 58999999999999999998 4 477765 789999887654321 010 1233455533
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 385 ~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
++ ++|+|+.|+|.... .++.....+. ...+++-...+....+
T Consensus 62 l~~~~~D~V~i~tp~~~h--~~~~~~al~~--Gk~vl~EKP~a~~~~e 105 (344)
T 3mz0_A 62 LADENVDAVLVTSWGPAH--ESSVLKAIKA--QKYVFCEKPLATTAEG 105 (344)
T ss_dssp HHCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEECSCSCSSHHH
T ss_pred hcCCCCCEEEECCCchhH--HHHHHHHHHC--CCcEEEcCCCCCCHHH
Confidence 33 58999999995443 3333333221 2235554444555554
No 343
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=96.52 E-value=0.0026 Score=66.92 Aligned_cols=101 Identities=14% Similarity=0.061 Sum_probs=59.8
Q ss_pred CCcceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
+++.||+|||+|.||..++..+.+. +.+|+ ++|++++++++..+ .. +.-...++++
T Consensus 3 m~~~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~-----------~~-----------~~~~~~~~~~ 60 (329)
T 3evn_A 3 LSKVRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFAN-----------KY-----------HLPKAYDKLE 60 (329)
T ss_dssp --CEEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC--------------CC-----------CCSCEESCHH
T ss_pred CCceEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------Hc-----------CCCcccCCHH
Confidence 3456899999999999999988765 45554 78999887544211 10 1112345553
Q ss_pred -CcC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 384 -EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 384 -~~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
.++ ++|+|+.|+|.... .++.....+. ...+++-..-+....+..
T Consensus 61 ~ll~~~~~D~V~i~tp~~~h--~~~~~~al~a--Gk~Vl~EKP~a~~~~e~~ 108 (329)
T 3evn_A 61 DMLADESIDVIYVATINQDH--YKVAKAALLA--GKHVLVEKPFTLTYDQAN 108 (329)
T ss_dssp HHHTCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEEESSCCSSHHHHH
T ss_pred HHhcCCCCCEEEECCCcHHH--HHHHHHHHHC--CCeEEEccCCcCCHHHHH
Confidence 344 79999999995443 3333333222 223565555555555433
No 344
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.51 E-value=0.01 Score=64.39 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=36.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
.+|.|+|+|.+|..+|..|.+.|++|+++|.+++.++.+.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~ 44 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLR 44 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 4699999999999999999999999999999999887653
No 345
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.48 E-value=0.0017 Score=70.37 Aligned_cols=70 Identities=19% Similarity=0.331 Sum_probs=49.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cCcC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SEFK 386 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~~~ 386 (724)
++|+|||+|.||..++..+...|. +|+++|+++++++...+.+ |. ..+. ..++ +.+.
T Consensus 168 ~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~----------g~----------~~~~-~~~l~~~l~ 226 (404)
T 1gpj_A 168 KTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL----------GG----------EAVR-FDELVDHLA 226 (404)
T ss_dssp CEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH----------TC----------EECC-GGGHHHHHH
T ss_pred CEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc----------CC----------ceec-HHhHHHHhc
Confidence 589999999999999999999998 8999999998764432211 10 0011 1122 3457
Q ss_pred CCCEEEEcccCCh
Q 004918 387 DVDMVIEAVIESV 399 (724)
Q Consensus 387 ~aDlVIeav~e~~ 399 (724)
++|+||+|++...
T Consensus 227 ~aDvVi~at~~~~ 239 (404)
T 1gpj_A 227 RSDVVVSATAAPH 239 (404)
T ss_dssp TCSEEEECCSSSS
T ss_pred CCCEEEEccCCCC
Confidence 8999999997543
No 346
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.47 E-value=0.0058 Score=65.06 Aligned_cols=101 Identities=15% Similarity=0.169 Sum_probs=62.3
Q ss_pred CCcceEEEEcCCCCcHHHHHHHH-H-CCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGSGIATAHI-L-NNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~iA~~la-~-~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
|+..||+|||+|.||...+..+. + .+++|+ ++|+++++++...+.. |. .....+++
T Consensus 21 m~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~----------g~-----------~~~~~~~~ 79 (357)
T 3ec7_A 21 GMTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDKY----------AI-----------EAKDYNDY 79 (357)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHHH----------TC-----------CCEEESSH
T ss_pred CCeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHh----------CC-----------CCeeeCCH
Confidence 44468999999999999999998 4 477765 7899998876643211 10 12334555
Q ss_pred c-CcC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 383 S-EFK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 383 ~-~~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
+ .++ ++|+|+.|+|.... .++.....+. ...+++-..-+....+.
T Consensus 80 ~~ll~~~~~D~V~i~tp~~~h--~~~~~~al~a--Gk~Vl~EKPla~~~~e~ 127 (357)
T 3ec7_A 80 HDLINDKDVEVVIITASNEAH--ADVAVAALNA--NKYVFCEKPLAVTAADC 127 (357)
T ss_dssp HHHHHCTTCCEEEECSCGGGH--HHHHHHHHHT--TCEEEEESSSCSSHHHH
T ss_pred HHHhcCCCCCEEEEcCCcHHH--HHHHHHHHHC--CCCEEeecCccCCHHHH
Confidence 3 333 68999999995443 3444333332 22355554445555543
No 347
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.44 E-value=0.0059 Score=66.87 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=60.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
++|+|+|+|.+|.++|..|+..|.+|+++|+++..+..+.. .+ ....+..+.+..+
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~-----------~g-------------~dv~~lee~~~~a 321 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM-----------EG-------------LQVLTLEDVVSEA 321 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----------TT-------------CEECCGGGTTTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-----------hC-------------CccCCHHHHHHhc
Confidence 68999999999999999999999999999999987655421 11 1112222557789
Q ss_pred CEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 389 DMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 389 DlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
|+|+++.....-+.. +..+.++++.+|+...
T Consensus 322 DvVi~atG~~~vl~~----e~l~~mk~gaiVvNaG 352 (488)
T 3ond_A 322 DIFVTTTGNKDIIML----DHMKKMKNNAIVCNIG 352 (488)
T ss_dssp SEEEECSSCSCSBCH----HHHTTSCTTEEEEESS
T ss_pred CEEEeCCCChhhhhH----HHHHhcCCCeEEEEcC
Confidence 999988642222222 2345578888776443
No 348
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.41 E-value=0.0045 Score=65.99 Aligned_cols=99 Identities=12% Similarity=0.065 Sum_probs=60.9
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
+..||+|||+|.||.. ++..+.+. +.+|+ ++|+++++++...+ . .+.....++++
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~-----------~-----------~~~~~~~~~~~ 61 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHR-----------F-----------ISDIPVLDNVP 61 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGG-----------T-----------SCSCCEESSHH
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHH-----------h-----------cCCCcccCCHH
Confidence 3458999999999985 88888775 67776 88999987654321 1 11233455664
Q ss_pred C-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 384 E-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 384 ~-~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
+ ++ +.|+|+.|+| ...-.++..+..+. ...+++-..-+....+.
T Consensus 62 ~ll~~~~vD~V~i~tp--~~~H~~~~~~al~a--GkhVl~EKPla~~~~e~ 108 (359)
T 3m2t_A 62 AMLNQVPLDAVVMAGP--PQLHFEMGLLAMSK--GVNVFVEKPPCATLEEL 108 (359)
T ss_dssp HHHHHSCCSEEEECSC--HHHHHHHHHHHHHT--TCEEEECSCSCSSHHHH
T ss_pred HHhcCCCCCEEEEcCC--cHHHHHHHHHHHHC--CCeEEEECCCcCCHHHH
Confidence 3 33 5699999999 43333444443332 22355544445555443
No 349
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.40 E-value=0.0099 Score=54.40 Aligned_cols=80 Identities=14% Similarity=0.098 Sum_probs=55.1
Q ss_pred ceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 309 RKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 309 ~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
++|+|||+ |.+|..++..|.+.|++ +|+++++. +. ...+....++++
T Consensus 23 ~~iaVVGas~~~g~~G~~~~~~l~~~G~~--v~~Vnp~~-~~--------------------------i~G~~~y~sl~~ 73 (144)
T 2d59_A 23 KKIALVGASPKPERDANIVMKYLLEHGYD--VYPVNPKY-EE--------------------------VLGRKCYPSVLD 73 (144)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCE--EEEECTTC-SE--------------------------ETTEECBSSGGG
T ss_pred CEEEEEccCCCCCchHHHHHHHHHHCCCE--EEEECCCC-Ce--------------------------ECCeeccCCHHH
Confidence 57999999 79999999999999997 56666642 00 012333444544
Q ss_pred c-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEE
Q 004918 385 F-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 385 ~-~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
+ ..+|++|.++| .+...+++.++.+.-. ..++.
T Consensus 74 l~~~vDlvvi~vp--~~~~~~vv~~~~~~gi-~~i~~ 107 (144)
T 2d59_A 74 IPDKIEVVDLFVK--PKLTMEYVEQAIKKGA-KVVWF 107 (144)
T ss_dssp CSSCCSEEEECSC--HHHHHHHHHHHHHHTC-SEEEE
T ss_pred cCCCCCEEEEEeC--HHHHHHHHHHHHHcCC-CEEEE
Confidence 4 47899999999 6777788877665433 34543
No 350
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=96.36 E-value=0.02 Score=63.54 Aligned_cols=163 Identities=14% Similarity=0.115 Sum_probs=101.3
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHh
Q 004918 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (724)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (724)
|.-|+|.. -+++++..+.+.++++.+... .+-+|.|.-.++ |..|.+-.+ ........+.+ ..+.
T Consensus 329 via~d~~~~gG~l~~~~~~K~ar~i~~a~~~-~~Plv~l~ds~G-~~~G~~~E~----------~G~~~~~Ak~l-~~~~ 395 (522)
T 1x0u_A 329 IVANNPEEFGGSIDIDAADKAARFIRFCDAF-NIPLISLVDTPG-YVPGTDQEY----------KGIIRHGAKML-YAFA 395 (522)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEECC-BCCSHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEECCCccCCCcCHHHHHHHHHHHHHHhhC-CCCEEEEecCCC-CCCchHHHH----------HHHHHHHHHHH-HHHH
Confidence 33455543 589999999999999988754 567777764332 433332111 11122333455 5678
Q ss_pred cCCCcEEEEECccccchhHHHHhh----cCEEEEeCCceeeCcccccCccCCcchhhhhccc-c---------cHHHHHH
Q 004918 96 DCKKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-V---------GLSKAIE 161 (724)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~lala----cD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~-~---------G~~~a~~ 161 (724)
....|.|+.|-|.|.|||.-.... +|+++|.+++.+++-.. -|.+..+-+. + -.....+
T Consensus 396 ~~~vP~Isvi~g~~~GGg~~~~a~~a~~~D~v~a~p~A~i~v~gp-------egaa~Il~r~~i~~~~d~~~~~~~l~~~ 468 (522)
T 1x0u_A 396 EATVPKITVIVRKSYGGAHIAMSIKSLGADLVYAWPTAEIAVTGP-------EGAVRILYRKEIQQASNPDDVLKQRIAE 468 (522)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTCCGGGTCSEEEECTTCEEESSCH-------HHHHHHHTSSSSSSSSSSSSSSHHHHHH
T ss_pred hCCCCEEEEEeCCcccHHHHHhcccccCCCEEEEeCCCEEEecCH-------HHHHHHHhhhhhhcccCHHHHHHHHHHH
Confidence 899999999999999998754443 99999999988875322 1111111111 1 0001110
Q ss_pred HHHcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHc
Q 004918 162 MMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 202 (724)
Q Consensus 162 l~ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (724)
+ .-.--++..+.+.|+||.|+++.++.+......+.+..
T Consensus 469 y--~~~~~~~~~~~~~G~iD~II~p~~tR~~L~~~L~~~~~ 507 (522)
T 1x0u_A 469 Y--RKLFANPYWAAEKGLVDDVIEPKDTRRVIVAGLEMLKT 507 (522)
T ss_dssp H--HHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHTT
T ss_pred H--HHhcCCHHHHHhcCCCcEeECHHHHHHHHHHHHHHHhh
Confidence 0 00123567899999999999999887776666665543
No 351
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=96.33 E-value=0.0072 Score=64.16 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=63.8
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCCC--c---EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccc-c
Q 004918 308 VRKVAVIG-GGLMGSGIATAHILNNI--Y---VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-L 380 (724)
Q Consensus 308 ~~kI~VIG-~G~mG~~iA~~la~~G~--~---V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~ 380 (724)
..||+||| +|.+|.+++..++..+. + +.++|.+.+..+...+...-.+ ..+... .+..+..+ .
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL----~h~~~p------~~~~v~i~~~ 101 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMEL----EDSLYP------LLREVSIGID 101 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHH----HTTTCT------TEEEEEEESC
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhH----Hhhhhh------hcCCcEEecC
Confidence 36899999 79999999999999876 3 8887665433222111111111 111100 11223333 4
Q ss_pred CccCcCCCCEEEEcc--cC------------ChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 381 DYSEFKDVDMVIEAV--IE------------SVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 381 ~~~~~~~aDlVIeav--~e------------~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
+++++++||+||.+. |- |..+.+++...+.++..++++|+..|.
T Consensus 102 ~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 102 PYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 568999999999875 21 234555566667777667777765543
No 352
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=96.32 E-value=0.0059 Score=63.46 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=45.7
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
..||+|||+|.||..++..+.+. +++|+ ++|+++++++. .|. .....+++.+.
T Consensus 9 ~irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~~--------------~g~-----------~~~~~~~l~~~ 63 (304)
T 3bio_A 9 KIRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVPF--------------ELQ-----------PFRVVSDIEQL 63 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC---------------------CCT-----------TSCEESSGGGS
T ss_pred CCEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHH--------------cCC-----------CcCCHHHHHhC
Confidence 35899999999999999999874 67877 78999875432 110 01112344334
Q ss_pred CCCCEEEEcccCChHHHHHHHHH
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSE 408 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~ 408 (724)
.++|+||+|+| ...-.++...
T Consensus 64 ~~~DvViiatp--~~~h~~~~~~ 84 (304)
T 3bio_A 64 ESVDVALVCSP--SREVERTALE 84 (304)
T ss_dssp SSCCEEEECSC--HHHHHHHHHH
T ss_pred CCCCEEEECCC--chhhHHHHHH
Confidence 78999999998 3333344433
No 353
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=96.29 E-value=0.0054 Score=63.21 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=51.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKDV 388 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~a 388 (724)
++|.|+|+|.||.++|..|++.| +|++++|+.++++...+.+.... +. .. .. .+..++-.+.+.++
T Consensus 129 k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~------~~-~~-~~-----~~d~~~~~~~~~~~ 194 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL------NK-KF-GE-----EVKFSGLDVDLDGV 194 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH------TC-CH-HH-----HEEEECTTCCCTTC
T ss_pred CEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc------cc-cc-ce-----eEEEeeHHHhhCCC
Confidence 57999999999999999999999 99999999988776554432210 00 00 00 01111113567889
Q ss_pred CEEEEccc
Q 004918 389 DMVIEAVI 396 (724)
Q Consensus 389 DlVIeav~ 396 (724)
|+||.+++
T Consensus 195 DilVn~ag 202 (287)
T 1nvt_A 195 DIIINATP 202 (287)
T ss_dssp CEEEECSC
T ss_pred CEEEECCC
Confidence 99999987
No 354
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.26 E-value=0.0046 Score=66.04 Aligned_cols=38 Identities=34% Similarity=0.365 Sum_probs=33.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
+||.|||+|.+|+.+|..|++ .++|+++|++.+.++++
T Consensus 17 mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~ 54 (365)
T 3abi_A 17 MKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV 54 (365)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH
Confidence 479999999999999998865 58999999999887764
No 355
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=96.23 E-value=0.0045 Score=63.42 Aligned_cols=39 Identities=15% Similarity=0.016 Sum_probs=35.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~ 347 (724)
+++.|+|+|.+|.+++..|++.|. +|++++|+++++++.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 689999999999999999999998 899999999876653
No 356
>2b0j_A 5,10-methenyltetrahydromethanopterin hydrogenase; rossmann fold, helix bundle, oxidoreductase; 1.75A {Methanocaldococcus jannaschii} SCOP: a.100.1.11 c.2.1.6 PDB: 3f47_A* 3daf_A* 3dag_A* 3f46_A* 3h65_A*
Probab=96.23 E-value=0.037 Score=55.08 Aligned_cols=109 Identities=18% Similarity=0.167 Sum_probs=77.7
Q ss_pred ccccc-CccCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhccc---CCC-CCEEEEecCCCC
Q 004918 376 LKGVL-DYSEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKT---SSQ-DRIIGAHFFSPA 450 (724)
Q Consensus 376 i~~~~-~~~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~---~~~-~r~ig~h~~~p~ 450 (724)
+..++ |.|+++++|++|.=.|-.- ....+.+++.+++++++|| +||.++|...+...+ .+. -.+..+||-.=|
T Consensus 129 VkVtsDD~EAvk~AEi~IlftPfG~-~t~~Iakkii~~lpEgAII-~nTCTipp~~ly~~le~l~R~DvgIsS~HPaaVP 206 (358)
T 2b0j_A 129 LKVTSDDREAVEGADIVITWLPKGN-KQPDIIKKFADAIPEGAIV-THACTIPTTKFAKIFKDLGREDLNITSYHPGCVP 206 (358)
T ss_dssp CEEESCHHHHHTTCSEEEECCTTCT-THHHHHHHHGGGSCTTCEE-EECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCT
T ss_pred cEeecchHHHhcCCCEEEEecCCCC-CcHHHHHHHHhhCcCCCEE-ecccCCCHHHHHHHHHHhCcccCCeeccCCCCCC
Confidence 44444 4589999999999998533 2347889999999999987 578888877555443 332 356777875433
Q ss_pred CCCCeeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004918 451 HVMPLLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (724)
Q Consensus 451 ~~~~lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~ 487 (724)
.. ..-....-...++|.++++..+.+..|+.+.++.
T Consensus 207 gt-~Gq~~~g~~yAtEEqIeklveLaksa~k~ay~vP 242 (358)
T 2b0j_A 207 EM-KGQVYIAEGYASEEAVNKLYEIGKIARGKAFKMP 242 (358)
T ss_dssp TT-CCCEEEEESSSCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CC-CCccccccccCCHHHHHHHHHHHHHhCCCeEecc
Confidence 22 2223344445689999999999999999999873
No 357
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=96.21 E-value=0.0029 Score=67.58 Aligned_cols=40 Identities=28% Similarity=0.338 Sum_probs=37.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
++|.|+|+|.+|..+++.+...|.+|+++|+++++++.+.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~ 207 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLE 207 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 7899999999999999999999999999999999877654
No 358
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.21 E-value=0.0088 Score=60.81 Aligned_cols=70 Identities=24% Similarity=0.268 Sum_probs=53.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+++.|+|+|-.+++++..|++.|. +|++++|+.++.+...+.+... ...+......+.+++
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt~~ra~~la~~~~~~------------------~~~~~~~~~~~~~~~ 187 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPSTARMGAVCELLGNG------------------FPGLTVSTQFSGLED 187 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHH------------------CTTCEEESCCSCSTT
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHHHhcc------------------CCcceehhhhhhhhc
Confidence 689999999999999999999996 8999999999887765443321 112222334456788
Q ss_pred CCEEEEccc
Q 004918 388 VDMVIEAVI 396 (724)
Q Consensus 388 aDlVIeav~ 396 (724)
+|+||.|.|
T Consensus 188 ~dliiNaTp 196 (269)
T 3tum_A 188 FDLVANASP 196 (269)
T ss_dssp CSEEEECSS
T ss_pred ccccccCCc
Confidence 999999987
No 359
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.20 E-value=0.0099 Score=60.69 Aligned_cols=39 Identities=10% Similarity=0.100 Sum_probs=35.5
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
++||.|.|+|.+|+.++..|++.|++|++.+|+++..+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 43 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEA 43 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHH
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhh
Confidence 478999999999999999999999999999999876544
No 360
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=96.16 E-value=0.0031 Score=65.70 Aligned_cols=42 Identities=14% Similarity=0.246 Sum_probs=36.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC---HHHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~---~~~~~~~~~~ 350 (724)
+++.|+|+|.+|.+++..|++.|. +|++++|+ .+++++..++
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~ 200 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEK 200 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHH
Confidence 689999999999999999999998 89999999 7776665443
No 361
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.11 E-value=0.0031 Score=69.35 Aligned_cols=40 Identities=18% Similarity=0.160 Sum_probs=36.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
++++|.|+|+|.||..++..|++.|++|+++||++++++.
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~ 41 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKK 41 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHH
Confidence 3578999999999999999999999999999999887654
No 362
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.10 E-value=0.0082 Score=58.84 Aligned_cols=39 Identities=8% Similarity=0.251 Sum_probs=34.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHH-HCCCcEEEEeCCHH-HHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHI-LNNIYVVLKEVNSE-YLLK 346 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la-~~G~~V~l~d~~~~-~~~~ 346 (724)
|++|.|.|+ |.+|..++..|+ +.|++|++.+|+++ .++.
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~ 46 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP 46 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh
Confidence 456999995 999999999999 89999999999988 6543
No 363
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=96.08 E-value=0.0023 Score=69.31 Aligned_cols=39 Identities=26% Similarity=0.160 Sum_probs=35.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
.+|+|||+|.+|..++..+...|.+|+++|++++.++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 589999999999999999999999999999999876654
No 364
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.04 E-value=0.011 Score=63.99 Aligned_cols=43 Identities=21% Similarity=0.206 Sum_probs=37.3
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCC---CcEEEEeCCHHHHHHHHHH
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNN---IYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G---~~V~l~d~~~~~~~~~~~~ 350 (724)
|+||.|+|+|.+|..++..|++.| .+|+++||+++++++..+.
T Consensus 1 M~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~ 46 (405)
T 4ina_A 1 MAKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQS 46 (405)
T ss_dssp -CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHH
Confidence 468999999999999999999998 3899999999988776543
No 365
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.01 E-value=0.027 Score=55.40 Aligned_cols=129 Identities=12% Similarity=0.132 Sum_probs=78.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHH-HHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY-LLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~-~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
++|.|||+|.+|..-+..|.++|.+|++++.+... ++. +.+.+.++ .+...-..+.+.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~-----------l~~~~~i~---------~i~~~~~~~dL~~ 91 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINE-----------WEAKGQLR---------VKRKKVGEEDLLN 91 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHH-----------HHHTTSCE---------EECSCCCGGGSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHH-----------HHHcCCcE---------EEECCCCHhHhCC
Confidence 68999999999999999999999999999876432 111 22223221 1111112256889
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHhcccCCCCCEEEEecCCCC--CCCCeeeEecCCCCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVGEKTSSQDRIIGAHFFSPA--HVMPLLEIVRTERTS 465 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~~~~~~~~r~ig~h~~~p~--~~~~lveii~~~~t~ 465 (724)
+|+||-|. ++.++...+.. .+..+ |.+. ...-+. . ..|+.|. ..++++..|.+.+.+
T Consensus 92 adLVIaAT-~d~~~N~~I~~----~ak~g-i~VN-vvD~p~-----~---------~~f~~Paiv~rg~l~iaIST~G~s 150 (223)
T 3dfz_A 92 VFFIVVAT-NDQAVNKFVKQ----HIKND-QLVN-MASSFS-----D---------GNIQIPAQFSRGRLSLAISTDGAS 150 (223)
T ss_dssp CSEEEECC-CCTHHHHHHHH----HSCTT-CEEE-C----------C---------CSEECCEEEEETTEEEEEECTTSC
T ss_pred CCEEEECC-CCHHHHHHHHH----HHhCC-CEEE-EeCCcc-----c---------CeEEEeeEEEeCCEEEEEECCCCC
Confidence 99999775 45565555443 34433 4432 222110 0 1122222 345677777777889
Q ss_pred HHHHHHHHHHHHH
Q 004918 466 AQVILDLMTVGKI 478 (724)
Q Consensus 466 ~e~~~~~~~l~~~ 478 (724)
|.....++.-++.
T Consensus 151 P~la~~iR~~ie~ 163 (223)
T 3dfz_A 151 PLLTKRIKEDLSS 163 (223)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHH
Confidence 9888888887764
No 366
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=95.97 E-value=0.024 Score=60.34 Aligned_cols=99 Identities=12% Similarity=0.076 Sum_probs=59.6
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 384 (724)
..||+|||+|.||..++..+.+. ++++ .++|+++++++...+. .|. . ......+++++
T Consensus 6 ~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~----------~~~-~--------~~~~~~~~~~~l 66 (362)
T 1ydw_A 6 QIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATA----------NNY-P--------ESTKIHGSYESL 66 (362)
T ss_dssp CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH----------TTC-C--------TTCEEESSHHHH
T ss_pred ceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hCC-C--------CCCeeeCCHHHH
Confidence 35899999999999999998875 5665 5789999876553221 110 0 01223445533
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 385 ~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
++ ++|+|++|+|.... .++.... +..+. +++-...+....+
T Consensus 67 l~~~~~D~V~i~tp~~~h--~~~~~~a---l~aGk~V~~EKP~a~~~~e 110 (362)
T 1ydw_A 67 LEDPEIDALYVPLPTSLH--VEWAIKA---AEKGKHILLEKPVAMNVTE 110 (362)
T ss_dssp HHCTTCCEEEECCCGGGH--HHHHHHH---HTTTCEEEECSSCSSSHHH
T ss_pred hcCCCCCEEEEcCChHHH--HHHHHHH---HHCCCeEEEecCCcCCHHH
Confidence 33 68999999994433 3333332 33444 4443334555543
No 367
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=95.92 E-value=0.023 Score=59.67 Aligned_cols=96 Identities=13% Similarity=0.021 Sum_probs=59.6
Q ss_pred cceEEEEcCCCCcH-HHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-
Q 004918 308 VRKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 384 (724)
Q Consensus 308 ~~kI~VIG~G~mG~-~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 384 (724)
..||+|||+|.||. .++..+...|++| .++|+++++++...+. .+.....+++++
T Consensus 4 ~~rvgiiG~G~~~~~~~~~~l~~~~~~lvav~d~~~~~~~~~a~~----------------------~~~~~~~~~~~~l 61 (336)
T 2p2s_A 4 KIRFAAIGLAHNHIYDMCQQLIDAGAELAGVFESDSDNRAKFTSL----------------------FPSVPFAASAEQL 61 (336)
T ss_dssp CCEEEEECCSSTHHHHHHHHHHHTTCEEEEEECSCTTSCHHHHHH----------------------STTCCBCSCHHHH
T ss_pred ccEEEEECCChHHHHHhhhhhcCCCcEEEEEeCCCHHHHHHHHHh----------------------cCCCcccCCHHHH
Confidence 35899999999996 6777777778885 6889999876654321 111233455533
Q ss_pred cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 385 FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 385 ~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
++ ++|+|++|+|.+... ++..... ..+. +++--..+....+
T Consensus 62 l~~~~~D~V~i~tp~~~h~--~~~~~al---~aGkhVl~EKP~a~~~~e 105 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDRA--ELALRTL---DAGKDFFTAKPPLTTLEQ 105 (336)
T ss_dssp HTCTTCCEEEECSCGGGHH--HHHHHHH---HTTCEEEECSSCCSCHHH
T ss_pred hhCCCCCEEEEeCChhhHH--HHHHHHH---HCCCcEEEeCCCCCCHHH
Confidence 33 689999999955442 3333322 2333 5554344555544
No 368
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.87 E-value=0.0042 Score=66.85 Aligned_cols=39 Identities=18% Similarity=0.139 Sum_probs=35.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|+|+|+|.+|..++..+...|.+|+++|+++++++.+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 589999999999999999999999999999998876654
No 369
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.84 E-value=0.044 Score=54.14 Aligned_cols=39 Identities=18% Similarity=0.035 Sum_probs=35.3
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
-++|.|.|+ |.+|..++..|++.|++|++.+|+++.++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 368999998 999999999999999999999999987654
No 370
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.83 E-value=0.099 Score=58.05 Aligned_cols=137 Identities=12% Similarity=0.124 Sum_probs=85.8
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
.-++.....+.+..+++.+... .+-+|.|.-. .|+-+.+-... ...+.+..... .......|+|++
T Consensus 111 gGS~g~~~~~Ki~r~~e~A~~~-~lPvI~l~dS-----gGAR~qeg~~~-----l~g~~~~~~~~---~~~s~~iP~Isv 176 (527)
T 1vrg_A 111 GGSLGEMHAKKIVKLLDLALKM-GIPVIGINDS-----GGARIQEGVDA-----LAGYGEIFLRN---TLASGVVPQITV 176 (527)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHH-TCCEEEEEEE-----CSBCGGGTHHH-----HHHHHHHHHHH---HHHTTTSCEEEE
T ss_pred CccccHHHHHHHHHHHHHHHHc-CCCEEEEECC-----CCCCccchhHH-----HHHHHHHHHHH---HHhCCCCCEEEE
Confidence 4689999999999999988765 4556666543 33333321110 00111111111 123456999999
Q ss_pred ECccccchhHHHHhhcCEEEEeCC-ceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCCCHH-----HHH--H
Q 004918 105 VEGLALGGGLELAMGCHARIAAPK-TQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSE-----EGW--K 176 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~-a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i~a~-----eA~--~ 176 (724)
|.|.|.|||......||++|+.++ +.+++ .|+... +. .+|+.++.+ +.+ +
T Consensus 177 v~Gp~~GG~a~s~al~D~vi~~~~~a~i~~--------------------aGP~vi-~~-~~ge~v~~e~lggae~~~~~ 234 (527)
T 1vrg_A 177 IAGPCAGGAVYSPALTDFIVMVDQTARMFI--------------------TGPNVI-KA-VTGEEISQEDLGGAMVHNQK 234 (527)
T ss_dssp EEEEEBGGGGHHHHHSSEEEEETTTCBCBS--------------------SCHHHH-HH-HHCCCCCHHHHHBHHHHHHT
T ss_pred EeCCCchHHHHHHHcCCeEEEecCceEEEe--------------------cCHHHH-HH-HhCCCCCccccccHHHHhhc
Confidence 999999999988889999999987 66443 222211 11 457777764 222 6
Q ss_pred CCCcceecCcc-hHHHHHHHHH
Q 004918 177 LGLIDAVVTSE-ELLKVSRLWA 197 (724)
Q Consensus 177 ~Glv~~vv~~~-~l~~~a~~~a 197 (724)
.|++|.+++++ ++.+.+.++.
T Consensus 235 ~G~vd~vv~d~~~~~~~~~~~L 256 (527)
T 1vrg_A 235 SGNAHFLADNDEKAMSLVRTLL 256 (527)
T ss_dssp SCCCSEEESSHHHHHHHHHHHH
T ss_pred ccceEEEecCHHHHHHHHHHHH
Confidence 99999999854 4555444443
No 371
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=95.83 E-value=0.0084 Score=62.29 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=35.7
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC---HHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN---SEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~---~~~~~~~~~ 349 (724)
+++.|+|+|-+|.+++..|++.|. +|++++|+ .+++++..+
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~ 193 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAK 193 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHH
Confidence 689999999999999999999998 89999999 666655443
No 372
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.82 E-value=0.031 Score=61.05 Aligned_cols=102 Identities=13% Similarity=0.061 Sum_probs=60.2
Q ss_pred CCcceEEEEcCCCCcH-HHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~-~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
++..||+|||+|.||. .++..+.+. +++| .++|++++.++...+. .| +.. ..+...+++
T Consensus 81 ~~~irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~~~~a~~----------~g-~~~-------~~~~~~~~~ 142 (433)
T 1h6d_A 81 DRRFGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAE----------YG-VDP-------RKIYDYSNF 142 (433)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHH----------TT-CCG-------GGEECSSSG
T ss_pred CCceEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHH----------hC-CCc-------ccccccCCH
Confidence 3446899999999997 898888765 5665 5889999876653221 11 000 012234555
Q ss_pred cC-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHH
Q 004918 383 SE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNI 430 (724)
Q Consensus 383 ~~-~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~ 430 (724)
++ ++ ++|+|++|+|.... .++.....+ .+. +++-...+....+
T Consensus 143 ~~ll~~~~vD~V~iatp~~~h--~~~~~~al~---aGk~Vl~EKPla~~~~e 189 (433)
T 1h6d_A 143 DKIAKDPKIDAVYIILPNSLH--AEFAIRAFK---AGKHVMCEKPMATSVAD 189 (433)
T ss_dssp GGGGGCTTCCEEEECSCGGGH--HHHHHHHHH---TTCEEEECSSCCSSHHH
T ss_pred HHHhcCCCCCEEEEcCCchhH--HHHHHHHHH---CCCcEEEcCCCCCCHHH
Confidence 43 44 79999999995443 233333322 333 5554334455544
No 373
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.78 E-value=0.011 Score=58.73 Aligned_cols=38 Identities=16% Similarity=-0.042 Sum_probs=34.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|.|+|+|.+|..++..|.+.|+ |+++|++++.++.+
T Consensus 10 ~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~ 47 (234)
T 2aef_A 10 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL 47 (234)
T ss_dssp CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence 589999999999999999999999 99999999876653
No 374
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=95.77 E-value=0.017 Score=62.63 Aligned_cols=153 Identities=16% Similarity=0.151 Sum_probs=82.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCc-EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCC----CHHHHHHh--hcCccccc
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKL----TQDKANNA--LKMLKGVL 380 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~----~~~~~~~~--~~~i~~~~ 380 (724)
-||+|||+|.||..++..+.+. |.+ |.++|+++++++...++.- . ....+ +..+.... .+....++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~~~a~~~y---G---~~~~~~~~~~~~~i~~a~~~g~~~v~~ 97 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTFKAIRTAY---G---DEENAREATTESAMTRAIEAGKIAVTD 97 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHHHHHHHHH---S---SSTTEEECSSHHHHHHHHHTTCEEEES
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHHhc---C---CccccccccchhhhhhhhccCCceEEC
Confidence 4799999999999999887654 555 5667999998776543210 0 00000 11111111 12345567
Q ss_pred CccC-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH---HHhcccCCCCCEEEEecCCCCCCCC
Q 004918 381 DYSE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN---IVGEKTSSQDRIIGAHFFSPAHVMP 454 (724)
Q Consensus 381 ~~~~-~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~---~~~~~~~~~~r~ig~h~~~p~~~~~ 454 (724)
|+++ ++ +.|+|++|+|.......-....++. ..-+++.+. ..... ++.+.......+
T Consensus 98 D~eeLL~d~dIDaVviaTp~p~~H~e~a~~AL~A---GKHVv~~nk-~l~~~eg~eL~~~A~e~Gvv------------- 160 (446)
T 3upl_A 98 DNDLILSNPLIDVIIDATGIPEVGAETGIAAIRN---GKHLVMMNV-EADVTIGPYLKAQADKQGVI------------- 160 (446)
T ss_dssp CHHHHHTCTTCCEEEECSCCHHHHHHHHHHHHHT---TCEEEECCH-HHHHHHHHHHHHHHHHHTCC-------------
T ss_pred CHHHHhcCCCCCEEEEcCCChHHHHHHHHHHHHc---CCcEEecCc-ccCHHHHHHHHHHHHHhCCe-------------
Confidence 7743 43 6899999997422222222222322 223443332 22221 222222111111
Q ss_pred eeeEecCCCCCHHHHHHHHHHHHHcCCeeEEEc
Q 004918 455 LLEIVRTERTSAQVILDLMTVGKIIKKVPVVVG 487 (724)
Q Consensus 455 lveii~~~~t~~e~~~~~~~l~~~lGk~~v~v~ 487 (724)
+....+..+..+..+.++.+.+|..++.++
T Consensus 161 ---l~~~~gdqp~~~~eLv~~a~~~G~~~v~~G 190 (446)
T 3upl_A 161 ---YSLGAGDEPSSCMELIEFVSALGYEVVSAG 190 (446)
T ss_dssp ---EEECTTSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ---eeecCCcchHHHHHHHHHHHhCCCeEEEec
Confidence 112223347778889999999999999986
No 375
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=95.76 E-value=0.025 Score=59.41 Aligned_cols=98 Identities=11% Similarity=0.039 Sum_probs=60.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC---Cc-EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNN---IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G---~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
.||+|||+|.||...+..+.+.+ ++ |.++|++++++++..+.. + .-...+++++
T Consensus 3 ~rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~----------~------------~~~~~~~~~~ 60 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKH----------D------------IPKAYGSYEE 60 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHH----------T------------CSCEESSHHH
T ss_pred cEEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHc----------C------------CCcccCCHHH
Confidence 58999999999999999887654 23 567899998876643211 1 1123455533
Q ss_pred -c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 385 -F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 385 -~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
+ .++|+|+.|+|..... ++..+..+. ...+++-..-+....+..
T Consensus 61 ll~~~~vD~V~i~tp~~~H~--~~~~~al~~--GkhVl~EKP~a~~~~e~~ 107 (334)
T 3ohs_X 61 LAKDPNVEVAYVGTQHPQHK--AAVMLCLAA--GKAVLCEKPMGVNAAEVR 107 (334)
T ss_dssp HHHCTTCCEEEECCCGGGHH--HHHHHHHHT--TCEEEEESSSSSSHHHHH
T ss_pred HhcCCCCCEEEECCCcHHHH--HHHHHHHhc--CCEEEEECCCCCCHHHHH
Confidence 3 3699999999955443 333333222 233565555555555433
No 376
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.73 E-value=0.0035 Score=61.53 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=33.8
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 310 kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
||.|.|+ |.+|+.++..|++.|++|++.+|+++.+..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAAD 39 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccc
Confidence 6999998 999999999999999999999999887553
No 377
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.72 E-value=0.0074 Score=66.51 Aligned_cols=41 Identities=15% Similarity=0.137 Sum_probs=36.1
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCcEEEEeCCHHHHHHH
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILN-NIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~-G~~V~l~d~~~~~~~~~ 347 (724)
++++|.|+|+|.+|..++..|++. |++|++++|++++++..
T Consensus 22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~l 63 (467)
T 2axq_A 22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQAL 63 (467)
T ss_dssp -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHH
T ss_pred CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHH
Confidence 457899999999999999999998 78999999999876654
No 378
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=95.67 E-value=0.11 Score=57.77 Aligned_cols=163 Identities=12% Similarity=0.074 Sum_probs=101.0
Q ss_pred CCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCC
Q 004918 21 INPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCK 98 (724)
Q Consensus 21 ~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (724)
|+|.. -+++++-.....++++.++. ..+-+|.|.=.+ .|..|.+-++. .......+++ ..+....
T Consensus 337 ~~~~~~~G~~~~~~~~Kaar~i~~a~~-~~~Plv~lvDtp-G~~~G~~~E~~----------g~~~~~A~~~-~a~~~~~ 403 (527)
T 1vrg_A 337 NQPSVLAGVLDIDSSDKAARFIRFLDA-FNIPILTFVDTP-GYLPGVAQEHG----------GIIRHGAKLL-YAYSEAT 403 (527)
T ss_dssp ECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEEC-CBCCCHHHHHT----------THHHHHHHHH-HHHHHCC
T ss_pred EcCcccCCCCCHHHHHHHHHHHHHHhh-cCCCeEEEecCC-CCcCchhhHHh----------HHHHHHHHHH-HHHhcCC
Confidence 45543 58999999999999988864 356666664322 35444432211 1223344555 5678899
Q ss_pred CcEEEEECccccchhHHHHhh----cCEEEEeCCceeeCcccccCccCCcchhhhhcccc-----cHHHHHH-HH--HcC
Q 004918 99 KPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MM--LLS 166 (724)
Q Consensus 99 kp~Iaav~G~a~GgG~~lala----cD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~-----G~~~a~~-l~--ltg 166 (724)
.|+|+.|-|.|.|||.--... +|+++|.++++++ .++.-|.+..+-+.- -....++ +. +.-
T Consensus 404 vP~isvI~g~~~gGg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~~ 476 (527)
T 1vrg_A 404 VPKITVILRKAYGGAYIAMGSKHLGADMVLAWPSAEIA-------VMGPEGAANIIFKREIEASSNPEETRRKLIEEYKQ 476 (527)
T ss_dssp SCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCcccHHHHHhcCCCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHHH
Confidence 999999999998887644333 8998888887776 333334333332211 1111111 22 111
Q ss_pred CCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHcc
Q 004918 167 KSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAAR 203 (724)
Q Consensus 167 ~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~ 203 (724)
+.-++..+.+.|+||.|+++.++........+.+..+
T Consensus 477 ~~~~p~~~~~~g~iD~II~p~~tR~~l~~~L~~l~~~ 513 (527)
T 1vrg_A 477 QFANPYIAASRGYVDMVIDPRETRKYIMRALEVCETK 513 (527)
T ss_dssp HTSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHHTTC
T ss_pred hhCCHHHHHHcCCCCeeeCHHHHHHHHHHHHHHHhcC
Confidence 2357788999999999999988777666665555433
No 379
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=95.63 E-value=0.012 Score=61.52 Aligned_cols=91 Identities=13% Similarity=0.157 Sum_probs=56.0
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-c
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 385 (724)
.||+|||+|.||..++..+.+. +.++ .++|++++. +. .. .+..++++++ +
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~--~~------------~~-------------gv~~~~d~~~ll 56 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--DT------------KT-------------PVFDVADVDKHA 56 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--SS------------SS-------------CEEEGGGGGGTT
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHH--hh------------cC-------------CCceeCCHHHHh
Confidence 4899999999999999999876 5664 578988653 10 00 1223445533 4
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHHH
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~~ 431 (724)
.++|+||+|+|..... .. +...+..+. +|++.+.+..+.++
T Consensus 57 ~~~DvViiatp~~~h~-~~----~~~al~aG~~Vv~ekp~~~~~~~~ 98 (320)
T 1f06_A 57 DDVDVLFLCMGSATDI-PE----QAPKFAQFACTVDTYDNHRDIPRH 98 (320)
T ss_dssp TTCSEEEECSCTTTHH-HH----HHHHHTTTSEEECCCCCGGGHHHH
T ss_pred cCCCEEEEcCCcHHHH-HH----HHHHHHCCCEEEECCCCcCCHHHH
Confidence 7899999999855432 22 223333344 44444444555444
No 380
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=95.61 E-value=0.0089 Score=61.15 Aligned_cols=74 Identities=15% Similarity=0.152 Sum_probs=53.8
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+++.|||.|. +|.++|..|...|..|+++++....++. .+.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~l-----------------------------------~~~~~~ 210 (300)
T 4a26_A 166 KRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTEDM-----------------------------------IDYLRT 210 (300)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHHH-----------------------------------HHHHHT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCchh-----------------------------------hhhhcc
Confidence 6899999866 8999999999999999999985433220 023568
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
||+||.+++-..-+.. ..+++++++++...
T Consensus 211 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 240 (300)
T 4a26_A 211 ADIVIAAMGQPGYVKG-------EWIKEGAAVVDVGT 240 (300)
T ss_dssp CSEEEECSCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCCCCCcH-------HhcCCCcEEEEEec
Confidence 9999999984322222 34688988876443
No 381
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=95.57 E-value=0.015 Score=59.21 Aligned_cols=36 Identities=22% Similarity=0.317 Sum_probs=29.2
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHH-CCCcEE-EEeCCHH
Q 004918 307 GVRKVAVIGG-GLMGSGIATAHIL-NNIYVV-LKEVNSE 342 (724)
Q Consensus 307 ~~~kI~VIG~-G~mG~~iA~~la~-~G~~V~-l~d~~~~ 342 (724)
+..||+|+|+ |.||..++..+.+ .|++|+ ++|++++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~ 42 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGS 42 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTC
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCch
Confidence 3458999998 9999999998774 578877 7788764
No 382
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.55 E-value=0.01 Score=60.36 Aligned_cols=102 Identities=15% Similarity=0.095 Sum_probs=58.5
Q ss_pred CCcceEEEEc-CCCCcHHHHHHHHHC-CCcEEE-EeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIG-GGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG-~G~mG~~iA~~la~~-G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
|+|.||+|+| +|.||..++..+.+. +++++. +|++...... ...+.+. .....+..++++
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G------------~d~gel~-----g~~~gv~v~~dl 67 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG------------QDAGAFL-----GKQTGVALTDDI 67 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT------------SBTTTTT-----TCCCSCBCBCCH
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc------------ccHHHHh-----CCCCCceecCCH
Confidence 3467999999 799999999988765 667665 6887532100 0001000 000123345566
Q ss_pred c-CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHH
Q 004918 383 S-EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLN 429 (724)
Q Consensus 383 ~-~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~ 429 (724)
+ .+.++|+||++.+ ++...+......+ .+.-+++.|++++..
T Consensus 68 ~~ll~~~DVVIDfT~--p~a~~~~~~~al~---~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 68 ERVCAEADYLIDFTL--PEGTLVHLDAALR---HDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHHCSEEEECSC--HHHHHHHHHHHHH---HTCEEEECCCCCCHH
T ss_pred HHHhcCCCEEEEcCC--HHHHHHHHHHHHH---cCCCEEEECCCCCHH
Confidence 3 4678999999986 5544444444333 344444555555443
No 383
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=95.54 E-value=0.0065 Score=61.34 Aligned_cols=72 Identities=14% Similarity=0.166 Sum_probs=53.3
Q ss_pred ceEEEEcCC-CCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGG-LMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G-~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+++.|||.| .+|.++|..|...|..|++++++...++ +.+++
T Consensus 151 k~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~-------------------------------------~~~~~ 193 (276)
T 3ngx_A 151 NTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIG-------------------------------------SMTRS 193 (276)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHH
T ss_pred CEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHH-------------------------------------Hhhcc
Confidence 689999987 5899999999999999999986532222 34568
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
||+||.+++-..-++. +.+++++++++..+
T Consensus 194 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 223 (276)
T 3ngx_A 194 SKIVVVAVGRPGFLNR-------EMVTPGSVVIDVGI 223 (276)
T ss_dssp SSEEEECSSCTTCBCG-------GGCCTTCEEEECCC
T ss_pred CCEEEECCCCCccccH-------hhccCCcEEEEecc
Confidence 9999999974322222 34688888876543
No 384
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=95.54 E-value=0.034 Score=58.75 Aligned_cols=73 Identities=14% Similarity=0.131 Sum_probs=49.2
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
++|-||||||+|.||.. .+..+... +.+|+ ++|++++++++..++. +.-...+|+
T Consensus 21 ~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~----------------------g~~~~y~d~ 78 (350)
T 4had_A 21 QSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRF----------------------SVPHAFGSY 78 (350)
T ss_dssp -CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHH----------------------TCSEEESSH
T ss_pred cCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHc----------------------CCCeeeCCH
Confidence 45679999999999975 45666654 66765 7899999877643311 111234566
Q ss_pred cC-c--CCCCEEEEcccCChH
Q 004918 383 SE-F--KDVDMVIEAVIESVP 400 (724)
Q Consensus 383 ~~-~--~~aDlVIeav~e~~~ 400 (724)
++ + .+.|+|+.|+|....
T Consensus 79 ~ell~~~~iDaV~I~tP~~~H 99 (350)
T 4had_A 79 EEMLASDVIDAVYIPLPTSQH 99 (350)
T ss_dssp HHHHHCSSCSEEEECSCGGGH
T ss_pred HHHhcCCCCCEEEEeCCCchh
Confidence 43 3 468999999995544
No 385
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.53 E-value=0.084 Score=56.07 Aligned_cols=98 Identities=7% Similarity=0.107 Sum_probs=60.9
Q ss_pred ceEEEEcCCCCcH-HHHHHHHHCCCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-c
Q 004918 309 RKVAVIGGGLMGS-GIATAHILNNIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE-F 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~-~iA~~la~~G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~-~ 385 (724)
-||+|||+|.+|. .++..+...|.+| .++|++++++++..+. .+.....+++++ +
T Consensus 27 irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----------------------~~~~~~~~~~~~ll 84 (361)
T 3u3x_A 27 LRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAV----------------------YADARRIATAEEIL 84 (361)
T ss_dssp CEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHH----------------------SSSCCEESCHHHHH
T ss_pred cEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHH----------------------cCCCcccCCHHHHh
Confidence 5899999999995 5677777788885 5789999987664321 112334556633 3
Q ss_pred --CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHHh
Q 004918 386 --KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIVG 432 (724)
Q Consensus 386 --~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~~ 432 (724)
.+.|+|+.|+|. ..-.++.....+. ...+++-..-+....+..
T Consensus 85 ~~~~vD~V~I~tp~--~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~ 129 (361)
T 3u3x_A 85 EDENIGLIVSAAVS--SERAELAIRAMQH--GKDVLVDKPGMTSFDQLA 129 (361)
T ss_dssp TCTTCCEEEECCCH--HHHHHHHHHHHHT--TCEEEEESCSCSSHHHHH
T ss_pred cCCCCCEEEEeCCh--HHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHH
Confidence 358999999994 3333444443332 233665555555555433
No 386
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=95.53 E-value=0.031 Score=59.52 Aligned_cols=69 Identities=19% Similarity=0.232 Sum_probs=46.3
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
++-||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+. .......++++
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-------------------------~~~~~~~~~~~ 60 (364)
T 3e82_A 6 NTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-------------------------LPDVTVIASPE 60 (364)
T ss_dssp -CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-------------------------CTTSEEESCHH
T ss_pred CcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-------------------------CCCCcEECCHH
Confidence 3468999999999997 66666654 67765 789998764310 01233445653
Q ss_pred -CcC--CCCEEEEcccCChH
Q 004918 384 -EFK--DVDMVIEAVIESVP 400 (724)
Q Consensus 384 -~~~--~aDlVIeav~e~~~ 400 (724)
.++ +.|+|++|+|....
T Consensus 61 ~ll~~~~~D~V~i~tp~~~H 80 (364)
T 3e82_A 61 AAVQHPDVDLVVIASPNATH 80 (364)
T ss_dssp HHHTCTTCSEEEECSCGGGH
T ss_pred HHhcCCCCCEEEEeCChHHH
Confidence 334 78999999995444
No 387
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.51 E-value=0.035 Score=55.86 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=29.9
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 341 (724)
.+|.|||+|.+|+.++..|+..|. +++++|.+.
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 589999999999999999999998 789998763
No 388
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.47 E-value=0.02 Score=60.04 Aligned_cols=36 Identities=17% Similarity=0.103 Sum_probs=32.6
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHCCCcEEEEeCCHH
Q 004918 307 GVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~la~~G~~V~l~d~~~~ 342 (724)
.++||.|||.|.+|.+ +|..|.+.|++|+++|.++.
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 4689999999999996 99999999999999998753
No 389
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.47 E-value=0.022 Score=62.74 Aligned_cols=40 Identities=18% Similarity=0.297 Sum_probs=37.1
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
+||.|+|+|.+|..+|..|...||+|+++|.+++.++.+.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~ 43 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQ 43 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 4799999999999999999999999999999999987754
No 390
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=95.47 E-value=0.027 Score=59.81 Aligned_cols=95 Identities=15% Similarity=0.122 Sum_probs=56.3
Q ss_pred CcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 307 GVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
++-||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+ + .......++++
T Consensus 4 ~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~ 58 (358)
T 3gdo_A 4 DTIKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKR-------------D------------FPDAEVVHELE 58 (358)
T ss_dssp TCEEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHH-------------H------------CTTSEEESSTH
T ss_pred CcceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHh-------------h------------CCCCceECCHH
Confidence 3458999999999997 56666554 67764 78999865221 0 11233455663
Q ss_pred C-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 384 E-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 384 ~-~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
+ ++ +.|+|++|+|..... ++.....+. ...+++--.-+....+
T Consensus 59 ~ll~~~~vD~V~i~tp~~~H~--~~~~~al~a--GkhVl~EKPla~~~~e 104 (358)
T 3gdo_A 59 EITNDPAIELVIVTTPSGLHY--EHTMACIQA--GKHVVMEKPMTATAEE 104 (358)
T ss_dssp HHHTCTTCCEEEECSCTTTHH--HHHHHHHHT--TCEEEEESSCCSSHHH
T ss_pred HHhcCCCCCEEEEcCCcHHHH--HHHHHHHHc--CCeEEEecCCcCCHHH
Confidence 3 44 789999999965543 333332221 2235554433445443
No 391
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.45 E-value=0.0086 Score=58.38 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=34.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
+||.|+|+ |.+|+.++..|++.|++|++++|+++.++.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~ 39 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ 39 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh
Confidence 37999996 999999999999999999999999877543
No 392
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=95.43 E-value=0.021 Score=59.96 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=30.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCC-------cEEEEeCCH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNI-------YVVLKEVNS 341 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~-------~V~l~d~~~ 341 (724)
+||.|+|+ |.+|+.++..|+..|+ +|+++|+++
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 48999997 9999999999999996 899999975
No 393
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=95.39 E-value=0.014 Score=59.72 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=53.7
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
++|.|||.|. +|..+|..|...|..|++++++.+.+. +.+++
T Consensus 166 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 208 (301)
T 1a4i_A 166 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------------------------EEVNK 208 (301)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------------------------HHhcc
Confidence 6899999995 799999999999999999985532221 34678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
||+||.|++...-++. +.++++++|++...
T Consensus 209 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 238 (301)
T 1a4i_A 209 GDILVVATGQPEMVKG-------EWIKPGAIVIDCGI 238 (301)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCC
T ss_pred CCEEEECCCCcccCCH-------HHcCCCcEEEEccC
Confidence 9999999974322222 23578888886544
No 394
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=95.34 E-value=0.053 Score=59.38 Aligned_cols=77 Identities=18% Similarity=0.205 Sum_probs=50.9
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc----
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL---- 380 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~---- 380 (724)
+..||+|||+|.||...+..+.+. |++| .++|++++++++..+.+. +.|. ......+
T Consensus 19 ~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~-------~~g~----------~~~~~~~~~~~ 81 (444)
T 2ixa_A 19 KKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEILK-------KNGK----------KPAKVFGNGND 81 (444)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHHH-------HTTC----------CCCEEECSSTT
T ss_pred CCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHH-------hcCC----------CCCceeccCCC
Confidence 345899999999999999888874 6675 588999998776543221 1110 0112233
Q ss_pred Ccc-CcC--CCCEEEEcccCChH
Q 004918 381 DYS-EFK--DVDMVIEAVIESVP 400 (724)
Q Consensus 381 ~~~-~~~--~aDlVIeav~e~~~ 400 (724)
+++ .++ +.|+|++|+|....
T Consensus 82 ~~~~ll~~~~vD~V~i~tp~~~h 104 (444)
T 2ixa_A 82 DYKNMLKDKNIDAVFVSSPWEWH 104 (444)
T ss_dssp THHHHTTCTTCCEEEECCCGGGH
T ss_pred CHHHHhcCCCCCEEEEcCCcHHH
Confidence 553 344 68999999995543
No 395
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=95.14 E-value=0.019 Score=61.07 Aligned_cols=97 Identities=12% Similarity=0.073 Sum_probs=57.8
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
+++-||+|||+|.||.. .+..+.+. +++|+ ++|++++++.+ ........+++
T Consensus 3 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~-------------------------~~~~~~~~~~~ 57 (362)
T 3fhl_A 3 LEIIKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE-------------------------RYPQASIVRSF 57 (362)
T ss_dssp CCCEEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT-------------------------TCTTSEEESCS
T ss_pred CCceEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH-------------------------hCCCCceECCH
Confidence 34568999999999997 67677665 67765 78999765211 01123345666
Q ss_pred cC-cC--CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 383 SE-FK--DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 383 ~~-~~--~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
++ ++ +.|+|++|+|..... ++.....+. ...+++--.-+....+.
T Consensus 58 ~~ll~~~~vD~V~i~tp~~~H~--~~~~~al~a--GkhVl~EKP~a~~~~ea 105 (362)
T 3fhl_A 58 KELTEDPEIDLIVVNTPDNTHY--EYAGMALEA--GKNVVVEKPFTSTTKQG 105 (362)
T ss_dssp HHHHTCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSCCSSHHHH
T ss_pred HHHhcCCCCCEEEEeCChHHHH--HHHHHHHHC--CCeEEEecCCCCCHHHH
Confidence 33 44 489999999954432 333333222 22355544445555443
No 396
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.13 E-value=0.0089 Score=58.73 Aligned_cols=37 Identities=24% Similarity=0.429 Sum_probs=33.9
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYL 344 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 344 (724)
|+||.|.|+ |.+|+.++..|++.|++|++.+|+++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI 41 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc
Confidence 578999996 9999999999999999999999998753
No 397
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=95.08 E-value=0.15 Score=56.58 Aligned_cols=163 Identities=15% Similarity=0.085 Sum_probs=101.5
Q ss_pred eCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcC
Q 004918 20 LINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDC 97 (724)
Q Consensus 20 l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (724)
=|+|.. -.++++-.+...++++.+++ .++-+|.|.=. +.|..|.+-++ ....+...+++ ..+.+.
T Consensus 332 an~~~~~~G~~~~~~a~Kaar~i~~~~~-~~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~~A~~l-~a~a~~ 398 (523)
T 1on3_A 332 ANQPSVMSGCLDINASDKAAEFVNFCDS-FNIPLVQLVDV-PGFLPGVQQEY----------GGIIRHGAKML-YAYSEA 398 (523)
T ss_dssp EECTTSGGGCBCHHHHHHHHHHHHHHHH-TTCCEEEEEEE-CCBCCCHHHHH----------TTHHHHHHHHH-HHHHHC
T ss_pred EecCCccCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeC-CCcCcchHHHH----------hhHHHHHHHHH-HHHhcC
Confidence 355543 58999999999999988865 35666666433 23555554221 11233444555 568889
Q ss_pred CCcEEEEECccccchhHHHHhh----cCEEEEeCCceeeCcccccCccCCcchhhhhcccc-----cHHHHHH-HHH--c
Q 004918 98 KKPIVAAVEGLALGGGLELAMG----CHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLV-----GLSKAIE-MML--L 165 (724)
Q Consensus 98 ~kp~Iaav~G~a~GgG~~lala----cD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~-----G~~~a~~-l~l--t 165 (724)
..|+|+.|-|.+.|||.--... +|+++|.++++++ .++.-|.+..+-+.- -....++ +.- .
T Consensus 399 ~vP~itvI~g~~~Ggg~~am~~~~~~~d~~~a~p~a~~~-------Vm~pegaa~Il~r~~~~~~~d~~~~~~~~~~~y~ 471 (523)
T 1on3_A 399 TVPKITVVLRKAYGGSYLAMCNRDLGADAVYAWPSAEIA-------VMGAEGAANVIFRKEIKAADDPDAMRAEKIEEYQ 471 (523)
T ss_dssp CSCEEEEEEEEEEHHHHHTTTCGGGTCSEEEECTTCEEE-------SSCHHHHHHHHTHHHHHHSSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCcccHHHHHhcccCCCCCEEEEcCCCeEE-------ecCHHHHHHHHhhhhhhcccCHHHHHHHHHHHHH
Confidence 9999999999999888744433 7888887777766 443334333332221 0111111 211 1
Q ss_pred CCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHc
Q 004918 166 SKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 202 (724)
Q Consensus 166 g~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (724)
-..-++..+.+.|+||.|+++.++........+.+..
T Consensus 472 ~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l~~ 508 (523)
T 1on3_A 472 NAFNTPYVAAARGQVDDVIDPADTRRKIASALEMYAT 508 (523)
T ss_dssp HHHSSHHHHHHTTSSSEECCGGGHHHHHHHHHHHGGG
T ss_pred HhhCCHHHHHhcCCCCEeeCHHHHHHHHHHHHHHHhc
Confidence 1125678899999999999998877766665555443
No 398
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=95.06 E-value=0.016 Score=58.84 Aligned_cols=72 Identities=17% Similarity=0.163 Sum_probs=53.4
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+++.|||.|. .|.++|..|...|..|++++++...++ +.+++
T Consensus 161 k~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~-------------------------------------~~~~~ 203 (285)
T 3p2o_A 161 KDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS-------------------------------------LYTRQ 203 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhhc
Confidence 6899999876 699999999999999999986543221 34678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
||+||.+++-..-++. +.+++++++++...
T Consensus 204 ADIVI~Avg~p~~I~~-------~~vk~GavVIDVgi 233 (285)
T 3p2o_A 204 ADLIIVAAGCVNLLRS-------DMVKEGVIVVDVGI 233 (285)
T ss_dssp CSEEEECSSCTTCBCG-------GGSCTTEEEEECCC
T ss_pred CCEEEECCCCCCcCCH-------HHcCCCeEEEEecc
Confidence 9999999973222222 34688888876443
No 399
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.04 E-value=0.077 Score=57.99 Aligned_cols=71 Identities=14% Similarity=0.080 Sum_probs=49.2
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHC--CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 308 VRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 308 ~~kI~VIG~----G~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
..||+|||+ |.||...+..+.+. +++| .++|++++++++..+. .|. ..+...+
T Consensus 20 ~irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~----------~g~----------~~~~~~~ 79 (438)
T 3btv_A 20 PIRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETSIATIQR----------LKL----------SNATAFP 79 (438)
T ss_dssp CEEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH----------TTC----------TTCEEES
T ss_pred CCEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cCC----------CcceeeC
Confidence 358999999 99999999999886 6775 5889999886654321 010 0112345
Q ss_pred CccC-c--CCCCEEEEcccCC
Q 004918 381 DYSE-F--KDVDMVIEAVIES 398 (724)
Q Consensus 381 ~~~~-~--~~aDlVIeav~e~ 398 (724)
++++ + .++|+|++|+|..
T Consensus 80 ~~~~ll~~~~vD~V~i~tp~~ 100 (438)
T 3btv_A 80 TLESFASSSTIDMIVIAIQVA 100 (438)
T ss_dssp SHHHHHHCSSCSEEEECSCHH
T ss_pred CHHHHhcCCCCCEEEEeCCcH
Confidence 5533 3 3689999999943
No 400
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.03 E-value=0.0083 Score=59.61 Aligned_cols=40 Identities=13% Similarity=0.189 Sum_probs=34.4
Q ss_pred CCCcceEEEEcC-CCCcHHHHHHHHHCC-CcEEEEeCCHHHH
Q 004918 305 PRGVRKVAVIGG-GLMGSGIATAHILNN-IYVVLKEVNSEYL 344 (724)
Q Consensus 305 ~~~~~kI~VIG~-G~mG~~iA~~la~~G-~~V~l~d~~~~~~ 344 (724)
+++|++|.|.|+ |.+|..++..|++.| ++|++++|+++.+
T Consensus 20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~ 61 (236)
T 3qvo_A 20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI 61 (236)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS
T ss_pred cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh
Confidence 456788999995 999999999999999 8999999998754
No 401
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=95.02 E-value=0.014 Score=60.58 Aligned_cols=91 Identities=18% Similarity=0.062 Sum_probs=58.3
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc-----c--c
Q 004918 309 RKVAVIGGGLM-GSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG-----V--L 380 (724)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~-----~--~ 380 (724)
++|.|||.|.| |..+|..|+..|..|+++||+..++.. +...-. . ..... + .
T Consensus 178 k~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~--------------ra~~la----~--~~~~~t~~~~t~~~ 237 (320)
T 1edz_A 178 KKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--------------RGESLK----L--NKHHVEDLGEYSED 237 (320)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--------------SCCCSS----C--CCCEEEEEEECCHH
T ss_pred CEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh--------------HHHHHh----h--hcccccccccccHh
Confidence 68999999976 999999999999999999998432111 000000 0 00111 1 2
Q ss_pred Cc-cCcCCCCEEEEcccCChH-HHHHHHHHHHhhCCCCcEEEecCCCC
Q 004918 381 DY-SEFKDVDMVIEAVIESVP-LKQKIFSELEKACPPHCILATNTSTI 426 (724)
Q Consensus 381 ~~-~~~~~aDlVIeav~e~~~-~k~~v~~~l~~~~~~~~ii~s~ts~~ 426 (724)
++ +.+++||+||.|++-..- +.. +.+++++++++..+..
T Consensus 238 ~L~e~l~~ADIVIsAtg~p~~vI~~-------e~vk~GavVIDVgi~r 278 (320)
T 1edz_A 238 LLKKCSLDSDVVITGVPSENYKFPT-------EYIKEGAVCINFACTK 278 (320)
T ss_dssp HHHHHHHHCSEEEECCCCTTCCBCT-------TTSCTTEEEEECSSSC
T ss_pred HHHHHhccCCEEEECCCCCcceeCH-------HHcCCCeEEEEcCCCc
Confidence 33 567899999999974222 222 2357888888766554
No 402
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=94.99 E-value=0.044 Score=58.88 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=59.8
Q ss_pred ceEEEEcCC-CCcHHHHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-
Q 004918 309 RKVAVIGGG-LMGSGIATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 384 (724)
Q Consensus 309 ~kI~VIG~G-~mG~~iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 384 (724)
.||+|||+| .||...+..+.+. +.+|+ ++|++++++++..+.. .+...+++++
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~-----------------------g~~~~~~~~el 59 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVRERFGKEY-----------------------GIPVFATLAEM 59 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHHHHHHHHH-----------------------TCCEESSHHHH
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHHHHHHHHc-----------------------CCCeECCHHHH
Confidence 489999999 9999999998875 56655 7899998876543211 1223455533
Q ss_pred c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 385 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 385 ~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
+ .++|+|++|+|.... .++.....+. ...+++-...+....+.
T Consensus 60 l~~~~vD~V~i~tp~~~H--~~~~~~al~a--Gk~Vl~EKP~a~~~~e~ 104 (387)
T 3moi_A 60 MQHVQMDAVYIASPHQFH--CEHVVQASEQ--GLHIIVEKPLTLSRDEA 104 (387)
T ss_dssp HHHSCCSEEEECSCGGGH--HHHHHHHHHT--TCEEEECSCCCSCHHHH
T ss_pred HcCCCCCEEEEcCCcHHH--HHHHHHHHHC--CCceeeeCCccCCHHHH
Confidence 3 369999999995443 2333333322 22355544445555443
No 403
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=94.98 E-value=0.018 Score=58.52 Aligned_cols=71 Identities=14% Similarity=0.093 Sum_probs=52.5
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+++.|||.|. +|..+|..|...|..|++++++...++ +.+++
T Consensus 162 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 204 (285)
T 3l07_A 162 AYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------------------------SHTTK 204 (285)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------------------------HHHTT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------Hhccc
Confidence 6899999876 799999999999999999986532211 34678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
||+||.+++-..-+.. +.+++++++++..
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvg 233 (285)
T 3l07_A 205 ADILIVAVGKPNFITA-------DMVKEGAVVIDVG 233 (285)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECC
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCcEEEEec
Confidence 9999999973222222 3467888887644
No 404
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.98 E-value=0.04 Score=56.50 Aligned_cols=42 Identities=19% Similarity=0.125 Sum_probs=37.0
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 004918 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 350 (724)
++|.|+| +|.+|.+++..|++.|.+|++++|++++++...+.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~ 162 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADS 162 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHH
Confidence 5789999 89999999999999999999999998877665443
No 405
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.94 E-value=0.091 Score=55.26 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=59.1
Q ss_pred cceEEEEcCCCCcHHHHHHHHHC-CCcEEE-EeCCHHHHHHHHHHHHHHHHhhHhcCCC-CHHHH-HHhhcCcccccCc-
Q 004918 308 VRKVAVIGGGLMGSGIATAHILN-NIYVVL-KEVNSEYLLKGIKTIEANVRGLVTRGKL-TQDKA-NNALKMLKGVLDY- 382 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~-G~~V~l-~d~~~~~~~~~~~~i~~~~~~~~~~g~~-~~~~~-~~~~~~i~~~~~~- 382 (724)
|.||+|+|+|.+|..++..+..+ +++|+. .|.+++......+. +...-.|.. ...+. .-.-+.+....+.
T Consensus 2 mikVgI~G~G~IGr~v~r~l~~~~~~evvaV~d~~~~~~~~l~~~-----dg~s~~g~~~~~~~v~~~~~~~l~v~~~~~ 76 (343)
T 2yyy_A 2 PAKVLINGYGSIGKRVADAVSMQDDMEVIGVTKTKPDFEARLAVE-----KGYKLFVAIPDNERVKLFEDAGIPVEGTIL 76 (343)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHSSSEEEEEEEESSCSHHHHHHHH-----TTCCEEESSCCHHHHHHHHHTTCCCCCBGG
T ss_pred ceEEEEECCCHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHh-----cCCccccccCCCceeecccCCeEEECCchH
Confidence 35899999999999999999876 567554 46665554432210 000111222 11111 1111123322233
Q ss_pred cCcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCC
Q 004918 383 SEFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTST 425 (724)
Q Consensus 383 ~~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~ 425 (724)
+.+.++|+|++|.|.... .+... ..++..++.++++.+.
T Consensus 77 ~~~~~vDiV~eatg~~~s--~~~a~--~~~l~aG~~VI~sap~ 115 (343)
T 2yyy_A 77 DIIEDADIVVDGAPKKIG--KQNLE--NIYKPHKVKAILQGGE 115 (343)
T ss_dssp GTGGGCSEEEECCCTTHH--HHHHH--HTTTTTTCEEEECTTS
T ss_pred HhccCCCEEEECCCcccc--HHHHH--HHHHHCCCEEEECCCc
Confidence 334699999999984432 22221 3566667766665443
No 406
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=94.89 E-value=0.011 Score=60.00 Aligned_cols=72 Identities=15% Similarity=0.133 Sum_probs=53.0
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
++|.|||.|. .|..+|..|...|..|++++++.+.+. +.+++
T Consensus 160 k~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------------------------~~~~~ 202 (288)
T 1b0a_A 160 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR-------------------------------------HHVEN 202 (288)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH-------------------------------------HHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHH-------------------------------------HHhcc
Confidence 6899999996 699999999999999999986553322 24567
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
||+||.+++...-++. +.++++++|++...
T Consensus 203 ADIVI~Avg~p~lI~~-------~~vk~GavVIDVgi 232 (288)
T 1b0a_A 203 ADLLIVAVGKPGFIPG-------DWIKEGAIVIDVGI 232 (288)
T ss_dssp CSEEEECSCCTTCBCT-------TTSCTTCEEEECCC
T ss_pred CCEEEECCCCcCcCCH-------HHcCCCcEEEEccC
Confidence 9999999973322222 23578888876443
No 407
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=94.80 E-value=0.1 Score=56.25 Aligned_cols=100 Identities=16% Similarity=0.135 Sum_probs=59.7
Q ss_pred CcceEEEEcCCC---CcHHHHHHHHHCC-CcEE--EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 307 GVRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 307 ~~~kI~VIG~G~---mG~~iA~~la~~G-~~V~--l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
+.-||+|||+|. ||...+..+...+ ++|+ ++|++++++++..++ .| + ......+
T Consensus 11 ~~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~----------~g-~---------~~~~~~~ 70 (398)
T 3dty_A 11 QPIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRGSAFGEQ----------LG-V---------DSERCYA 70 (398)
T ss_dssp SCEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHHHHHHHH----------TT-C---------CGGGBCS
T ss_pred CcceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHHHHHHHH----------hC-C---------CcceeeC
Confidence 345899999999 9999988887765 6776 579999987664321 11 0 0012345
Q ss_pred CccC-c-------CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 381 DYSE-F-------KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 381 ~~~~-~-------~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
++++ + .+.|+|+.|+|..... ++.....+. ...+++--.-+....+
T Consensus 71 ~~~~ll~~~~~~~~~vD~V~i~tp~~~H~--~~~~~al~a--GkhVl~EKPla~~~~e 124 (398)
T 3dty_A 71 DYLSMFEQEARRADGIQAVSIATPNGTHY--SITKAALEA--GLHVVCEKPLCFTVEQ 124 (398)
T ss_dssp SHHHHHHHHTTCTTCCSEEEEESCGGGHH--HHHHHHHHT--TCEEEECSCSCSCHHH
T ss_pred CHHHHHhcccccCCCCCEEEECCCcHHHH--HHHHHHHHC--CCeEEEeCCCcCCHHH
Confidence 5533 3 2489999999955443 443333332 2235543333444443
No 408
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=94.78 E-value=0.15 Score=52.21 Aligned_cols=94 Identities=16% Similarity=0.199 Sum_probs=63.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHH-CCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccc-cCccCc-
Q 004918 309 RKVAVIGGGLMGSGIATAHIL-NNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF- 385 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~-~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~- 385 (724)
.+|..||+|..|.+... +++ .|.+|+.+|++++.++.+++.+++. |. .++++. .|...+
T Consensus 124 ~rVLDIGcG~G~~ta~~-lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-------gl----------~~v~~v~gDa~~l~ 185 (298)
T 3fpf_A 124 ERAVFIGGGPLPLTGIL-LSHVYGMRVNVVEIEPDIAELSRKVIEGL-------GV----------DGVNVITGDETVID 185 (298)
T ss_dssp CEEEEECCCSSCHHHHH-HHHTTCCEEEEEESSHHHHHHHHHHHHHH-------TC----------CSEEEEESCGGGGG
T ss_pred CEEEEECCCccHHHHHH-HHHccCCEEEEEECCHHHHHHHHHHHHhc-------CC----------CCeEEEECchhhCC
Confidence 68999999997644333 344 5889999999999999887654321 10 122221 111111
Q ss_pred -CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEec
Q 004918 386 -KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATN 422 (724)
Q Consensus 386 -~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ 422 (724)
...|+|+.+.. ..-+..+++++.+.++|+..++..
T Consensus 186 d~~FDvV~~~a~--~~d~~~~l~el~r~LkPGG~Lvv~ 221 (298)
T 3fpf_A 186 GLEFDVLMVAAL--AEPKRRVFRNIHRYVDTETRIIYR 221 (298)
T ss_dssp GCCCSEEEECTT--CSCHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCcCEEEECCC--ccCHHHHHHHHHHHcCCCcEEEEE
Confidence 46799997654 345678999999999998877643
No 409
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=94.76 E-value=0.33 Score=53.62 Aligned_cols=161 Identities=14% Similarity=0.106 Sum_probs=98.5
Q ss_pred EEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHh
Q 004918 18 ITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIE 95 (724)
Q Consensus 18 i~l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (724)
|.=|+|.. -.++++-.+...+.++.+++. ++-+|.|.=.+ .|-.|.+-++ ....+...+++ .++.
T Consensus 342 vian~~~~~~G~l~~~~a~Kaarfi~lcd~~-~iPlv~lvDtp-Gf~~G~~~E~----------~Gi~~~gAk~l-~a~a 408 (531)
T 3n6r_B 342 VVANQPLVLAGCLDIDSSRKAARFVRFCDAF-EIPLLTLIDVP-GFLPGTSQEY----------GGVIKHGAKLL-YAYG 408 (531)
T ss_dssp EEEECTTTGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-SBCCSHHHHH----------TTHHHHHHHHH-HHHH
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHhhcc-CCCEEEEeCCC-CCCCCHHHHH----------hhHHHHHHHHH-HHHH
Confidence 33456654 589999999999999877754 56677764332 3544543221 12234445666 6688
Q ss_pred cCCCcEEEEECccccchhHHHHh----hcCEEEEeCCceeeCcccccCccCCcchhhhh-ccccc---HHHHHHHHHcCC
Q 004918 96 DCKKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRL-PRLVG---LSKAIEMMLLSK 167 (724)
Q Consensus 96 ~~~kp~Iaav~G~a~GgG~~lal----acD~ria~~~a~f~~pe~~~G~~P~~g~~~~l-~r~~G---~~~a~~l~ltg~ 167 (724)
....|+|+.|-|.+.|||.--.. .+|+++|.++++++. ++.-|.+..+ .+.+- ....+.--+.-+
T Consensus 409 ~a~VP~itvI~g~~~Ggg~~am~~~~~~~d~~~awp~A~i~V-------m~pegaa~Il~r~~~~~~~~~~~~~~~y~~~ 481 (531)
T 3n6r_B 409 EATVPMVTVITRKAYGGAYVVMSSKHLRADFNYAWPTAEVAV-------MGAKGATEIIHRGDLGDPEKIAQHTADYEER 481 (531)
T ss_dssp HCCSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHCCTTTTSTTHHHHHHHHHHHH
T ss_pred hCCCCEEEEEcCCccchhhhhccCccCCCCeEEEcCCceEec-------CCHHHHHHHHhcccccchhHHHHHHHHHHHH
Confidence 99999999999999988864333 289998888887764 3323322222 22111 011110011112
Q ss_pred CCCHHHHHHCCCcceecCcchHHHHHHHHHH
Q 004918 168 SITSEEGWKLGLIDAVVTSEELLKVSRLWAL 198 (724)
Q Consensus 168 ~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~ 198 (724)
.-++-.|.+.|+||.|++|.+.........+
T Consensus 482 ~~~p~~aa~~~~vD~vIdP~~TR~~l~~~l~ 512 (531)
T 3n6r_B 482 FANPFVASERGFVDEVIQPRSTRKRVARAFA 512 (531)
T ss_dssp HSSSHHHHHHTSSSEECCGGGHHHHHHHHHH
T ss_pred hcCHHHHHhcCccCcccCHHHHHHHHHHHHH
Confidence 2456678889999999999987766554443
No 410
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=94.74 E-value=0.051 Score=56.97 Aligned_cols=101 Identities=17% Similarity=0.200 Sum_probs=61.5
Q ss_pred CcceEEEEcC-CCCcHHHHHHHHHC-CCcEEEEeCCH---HHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc-
Q 004918 307 GVRKVAVIGG-GLMGSGIATAHILN-NIYVVLKEVNS---EYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL- 380 (724)
Q Consensus 307 ~~~kI~VIG~-G~mG~~iA~~la~~-G~~V~l~d~~~---~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~- 380 (724)
.|.||+|+|+ |.+|..+...|.++ .+++..+..+. ..-+.. ......+ .+. ..+.+..
T Consensus 3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~----~~~~p~~--~~~----------~~~~v~~~ 66 (337)
T 3dr3_A 3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLI----SDLHPQL--KGI----------VELPLQPM 66 (337)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBH----HHHCGGG--TTT----------CCCBEEEE
T ss_pred CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCch----HHhCccc--cCc----------cceeEecc
Confidence 3579999995 99999999999884 56777664433 211110 0000000 010 0122222
Q ss_pred -CccCc-CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCH
Q 004918 381 -DYSEF-KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDL 428 (724)
Q Consensus 381 -~~~~~-~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~ 428 (724)
+.+.+ +++|+||+|+| ...-+++..++. ..++.++++++...+
T Consensus 67 ~~~~~~~~~~Dvvf~a~p--~~~s~~~~~~~~---~~g~~vIDlSa~fR~ 111 (337)
T 3dr3_A 67 SDISEFSPGVDVVFLATA--HEVSHDLAPQFL---EAGCVVFDLSGAFRV 111 (337)
T ss_dssp SSGGGTCTTCSEEEECSC--HHHHHHHHHHHH---HTTCEEEECSSTTSS
T ss_pred CCHHHHhcCCCEEEECCC--hHHHHHHHHHHH---HCCCEEEEcCCcccc
Confidence 34455 89999999999 555566665553 457888899887654
No 411
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=94.66 E-value=0.021 Score=57.94 Aligned_cols=72 Identities=17% Similarity=0.144 Sum_probs=52.4
Q ss_pred ceEEEEcCCC-CcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCcCC
Q 004918 309 RKVAVIGGGL-MGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEFKD 387 (724)
Q Consensus 309 ~kI~VIG~G~-mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 387 (724)
+++.|||.|. .|.++|..|...|..|+++.+....++ +.+++
T Consensus 162 k~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~-------------------------------------~~~~~ 204 (286)
T 4a5o_A 162 MDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLA-------------------------------------DHVSR 204 (286)
T ss_dssp CEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHH-------------------------------------HHHHT
T ss_pred CEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHH-------------------------------------HHhcc
Confidence 6899999865 899999999999999999976432211 24678
Q ss_pred CCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCC
Q 004918 388 VDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTS 424 (724)
Q Consensus 388 aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts 424 (724)
||+||.+++-..-+.. +.++++++|++..+
T Consensus 205 ADIVI~Avg~p~~I~~-------~~vk~GavVIDvgi 234 (286)
T 4a5o_A 205 ADLVVVAAGKPGLVKG-------EWIKEGAIVIDVGI 234 (286)
T ss_dssp CSEEEECCCCTTCBCG-------GGSCTTCEEEECCS
T ss_pred CCEEEECCCCCCCCCH-------HHcCCCeEEEEecc
Confidence 9999999973222222 34678888876443
No 412
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=94.65 E-value=0.092 Score=55.21 Aligned_cols=97 Identities=10% Similarity=0.005 Sum_probs=60.1
Q ss_pred cceEEEEcCC-CCcHHHHHHHHHC--CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 308 VRKVAVIGGG-LMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 308 ~~kI~VIG~G-~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
.-||+|||+| .||...+..+.+. +.+| .++|++++++++..++. +.....++++
T Consensus 18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~----------------------~~~~~~~~~~ 75 (340)
T 1zh8_A 18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV----------------------GNPAVFDSYE 75 (340)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH----------------------SSCEEESCHH
T ss_pred ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHh----------------------CCCcccCCHH
Confidence 3589999999 8999999998876 4565 67899999876643211 1123345663
Q ss_pred C-c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 384 E-F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 384 ~-~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
+ + .+.|+|++|+|.... .++.....+. ...+++--.-+....+
T Consensus 76 ~ll~~~~vD~V~i~tp~~~H--~~~~~~al~a--GkhVl~EKPla~~~~e 121 (340)
T 1zh8_A 76 ELLESGLVDAVDLTLPVELN--LPFIEKALRK--GVHVICEKPISTDVET 121 (340)
T ss_dssp HHHHSSCCSEEEECCCGGGH--HHHHHHHHHT--TCEEEEESSSSSSHHH
T ss_pred HHhcCCCCCEEEEeCCchHH--HHHHHHHHHC--CCcEEEeCCCCCCHHH
Confidence 3 3 368999999995443 3443333222 2235554444445544
No 413
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=94.63 E-value=0.2 Score=55.83 Aligned_cols=161 Identities=14% Similarity=0.132 Sum_probs=98.6
Q ss_pred eCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcC
Q 004918 20 LINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDC 97 (724)
Q Consensus 20 l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (724)
=|+|.. -+++++-.+...++++.+++. .+-+|.|-=. ..|..|.+-++- ...+...+++ ..+...
T Consensus 353 an~~~~~~G~l~~~~a~Kaar~i~~a~~~-~iPlv~lvDt-~Gf~~G~~~E~~----------Gi~~~ga~~l-~a~~~~ 419 (548)
T 2bzr_A 353 ANQPTHFAGCLDINASEKAARFVRTCDCF-NIPIVMLVDV-PGFLPGTDQEYN----------GIIRRGAKLL-YAYGEA 419 (548)
T ss_dssp EECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEE-CCBCCCHHHHHT----------THHHHHHHHH-HHHHHC
T ss_pred EECCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeec-cCCCCChHHHHh----------hHHHHHHHHH-HHHhCC
Confidence 355543 589999999999999988653 5666666432 235555543221 1223344555 568889
Q ss_pred CCcEEEEECccccchhHHHHh----hcCEEEEeCCceeeCcccccCccCCcchhhhhccc-ccH--------HHHHH-HH
Q 004918 98 KKPIVAAVEGLALGGGLELAM----GCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL--------SKAIE-MM 163 (724)
Q Consensus 98 ~kp~Iaav~G~a~GgG~~lal----acD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~-~G~--------~~a~~-l~ 163 (724)
..|+|+.|-|.|.|||.--.. .+|+++|.++++++. ++.-|.+..+-+. +-. ...++ +.
T Consensus 420 ~VP~isvI~g~~~Ggg~~am~~~~~~~d~~~awp~a~i~V-------mgpegaa~Il~r~~~~~~~~~g~~~~~~~~~~~ 492 (548)
T 2bzr_A 420 TVPKITVITRKAYGGAYCVMGSKDMGCDVNLAWPTAQIAV-------MGASGAVGFVYRQQLAEAAANGEDIDKLRLRLQ 492 (548)
T ss_dssp CSCEEEEEEEEEEHHHHHHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTCCC----------CHHHHHHHH
T ss_pred CCCEEEEEeCCcchHHHHHhccccCCCCEEEEcCCCEEEe-------cCHHHHHHHHhhhHHhhhhcccccHHHHHHHHH
Confidence 999999999999988774442 389998888887763 3333333333221 110 11111 21
Q ss_pred H--cCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHH
Q 004918 164 L--LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDI 200 (724)
Q Consensus 164 l--tg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~l 200 (724)
- .-..-++..+.+.|+||.|+++.+.........+.+
T Consensus 493 ~~y~~~~~~p~~~a~~g~iD~II~p~~tR~~l~~~L~~l 531 (548)
T 2bzr_A 493 QEYEDTLVNPYVAAERGYVGAVIPPSHTRGYIGTALRLL 531 (548)
T ss_dssp HHHHHHHSBSHHHHHTTSSSEECCGGGHHHHHHHHHHHT
T ss_pred HHHHHhhCCHHHHHhcCCCceeeCHHHHHHHHHHHHHHH
Confidence 1 011235577899999999999987766655544443
No 414
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=94.56 E-value=0.022 Score=57.58 Aligned_cols=71 Identities=23% Similarity=0.231 Sum_probs=52.3
Q ss_pred ceEEEEcCCCC-cHHHHHHHHHC--CCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 309 RKVAVIGGGLM-GSGIATAHILN--NIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 309 ~kI~VIG~G~m-G~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
+++.|||.|.| |..+|..|... |..|++++++.+.+. +.+
T Consensus 159 k~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~-------------------------------------~~~ 201 (281)
T 2c2x_A 159 AHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLP-------------------------------------ALT 201 (281)
T ss_dssp CEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHH-------------------------------------HHH
T ss_pred CEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHH-------------------------------------HHH
Confidence 68999999975 99999999999 889999976543222 346
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNT 423 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~t 423 (724)
++||+||.|++-..-++. +.+++++++++..
T Consensus 202 ~~ADIVI~Avg~p~~I~~-------~~vk~GavVIDVg 232 (281)
T 2c2x_A 202 RQADIVVAAVGVAHLLTA-------DMVRPGAAVIDVG 232 (281)
T ss_dssp TTCSEEEECSCCTTCBCG-------GGSCTTCEEEECC
T ss_pred hhCCEEEECCCCCcccCH-------HHcCCCcEEEEcc
Confidence 789999999973322322 2357788887543
No 415
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC, PCC, CT, carboxyltransfe polyketide, fatty acid, PKS, FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A* 3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Probab=94.56 E-value=0.29 Score=54.18 Aligned_cols=165 Identities=15% Similarity=0.204 Sum_probs=102.9
Q ss_pred EEEEeCCCCC--CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHH
Q 004918 16 AIITLINPPV--NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNL 93 (724)
Q Consensus 16 ~~i~l~~p~~--Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (724)
.-|.=|+|.. -+++++-.+...++++.+++. ++-+|.|.=.+ .|-.|.+-++ ..+.+...+++ .+
T Consensus 334 Vgvian~~~~~~G~l~~~~a~Kaarfi~~c~~~-~iPlv~lvDtp-Gf~~G~~~E~----------~gi~~~~Ak~l-~a 400 (530)
T 3iav_A 334 VGIVANQPMQFAGCLDITASEKAARFVRTCDAF-NVPVLTFVDVP-GFLPGVDQEH----------DGIIRRGAKLI-FA 400 (530)
T ss_dssp EEEEEECTTSGGGCBCHHHHHHHHHHHHHHHHT-TCCEEEEEEEC-CBCCCHHHHH----------TTHHHHHHHHH-HH
T ss_pred EEEEEecCcccCCCCCHHHHHHHHHHHHHHHhc-CCCEEEEeeCC-CCCccHHHHH----------hhHHHHHHHHH-HH
Confidence 3344456654 589999999999999877754 56677764333 2666655321 12334455666 66
Q ss_pred HhcCCCcEEEEECccccchhHHHHhh-----cCEEEEeCCceeeCcccccCccCCcchhhhh-ccccc------HHHHHH
Q 004918 94 IEDCKKPIVAAVEGLALGGGLELAMG-----CHARIAAPKTQLGLPELTLGVIPGFGGTQRL-PRLVG------LSKAIE 161 (724)
Q Consensus 94 l~~~~kp~Iaav~G~a~GgG~~lala-----cD~ria~~~a~f~~pe~~~G~~P~~g~~~~l-~r~~G------~~~a~~ 161 (724)
+.....|+|+.|-|.+.|||. ++++ +|+++|.++++++. ++.-|.+..+ .+.+- ...-.+
T Consensus 401 ~a~a~vP~itvI~g~~~GGa~-~am~~~~~~~d~~~awp~a~~~V-------m~~egaa~il~r~~~~~~~~d~~~~~~~ 472 (530)
T 3iav_A 401 YAEATVPLITVITRKAFGGAY-VVMGSKHLGADLNLAWPTAQIAV-------MGAQGAVNILHRRTIADAGDDAEATRAR 472 (530)
T ss_dssp HHHCCSCEEEEEEEEEEHHHH-HHTTCGGGTCSEEEECTTCEEES-------SCHHHHHHHHTSTTTSTTCTTCHHHHHH
T ss_pred HHhCCCCEEEEEeCCcchHHH-HHhcCCCCCCCEEEEcCCceEec-------CCHHHHHHHHhhhhhhhcccCHHHHHHH
Confidence 889999999999999998665 5554 69999888887764 3222322222 21111 011111
Q ss_pred HH--HcCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHH
Q 004918 162 MM--LLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 201 (724)
Q Consensus 162 l~--ltg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la 201 (724)
+. +.-+.-++..|.+.|+||.|++|.+.........+.+.
T Consensus 473 ~~~~y~~~~~~p~~aa~~~~vD~VIdP~~TR~~l~~~l~~~~ 514 (530)
T 3iav_A 473 LIQEYEDALLNPYTAAERGYVDAVIMPSDTRRHIVRGLRQLR 514 (530)
T ss_dssp HHHHHHHHHSSSHHHHHTTSSSEECCGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCHHHHHhcCCCCcccCHHHHHHHHHHHHHHHh
Confidence 11 11112367788899999999999988776555544443
No 416
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=94.51 E-value=0.023 Score=58.32 Aligned_cols=33 Identities=27% Similarity=0.264 Sum_probs=30.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 341 (724)
.||.|||+|..|+.++..|+++|. +++++|.+.
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 589999999999999999999997 899999775
No 417
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=94.47 E-value=0.032 Score=55.36 Aligned_cols=42 Identities=12% Similarity=0.123 Sum_probs=35.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
.++|.|.|+ |.+|.++|..|++.|++|++.+|+++.+++..+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 356777776 889999999999999999999999988776544
No 418
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=94.45 E-value=0.068 Score=56.54 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=57.0
Q ss_pred ceEEEEcCCCCcHH-HHHHHHHC-CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC-
Q 004918 309 RKVAVIGGGLMGSG-IATAHILN-NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE- 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~-iA~~la~~-G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~- 384 (724)
-||+|||+|.||.. .+..+.+. +++|+ ++|++++++++ . .......+++++
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~------------~~~~~~~~~~~~l 62 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------D------------WPAIPVVSDPQML 62 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------T------------CSSCCEESCHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------h------------CCCCceECCHHHH
Confidence 58999999999997 67777665 67765 78999876431 0 012334556633
Q ss_pred c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCc-EEEecCCCCCHHHH
Q 004918 385 F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHC-ILATNTSTIDLNIV 431 (724)
Q Consensus 385 ~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~-ii~s~ts~~~~~~~ 431 (724)
+ .+.|+|++|+|..... ++..... ..+. +++-..-+....+.
T Consensus 63 l~~~~vD~V~i~tp~~~H~--~~~~~al---~aGkhV~~EKPla~~~~e~ 107 (352)
T 3kux_A 63 FNDPSIDLIVIPTPNDTHF--PLAQSAL---AAGKHVVVDKPFTVTLSQA 107 (352)
T ss_dssp HHCSSCCEEEECSCTTTHH--HHHHHHH---HTTCEEEECSSCCSCHHHH
T ss_pred hcCCCCCEEEEeCChHHHH--HHHHHHH---HCCCcEEEECCCcCCHHHH
Confidence 3 3589999999966543 3333322 2333 55544435555443
No 419
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=94.37 E-value=0.12 Score=57.01 Aligned_cols=72 Identities=18% Similarity=0.127 Sum_probs=49.5
Q ss_pred CcceEEEEcC----CCCcHHHHHHHHHC--CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccc
Q 004918 307 GVRKVAVIGG----GLMGSGIATAHILN--NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (724)
Q Consensus 307 ~~~kI~VIG~----G~mG~~iA~~la~~--G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 379 (724)
+.-||+|||+ |.||...+..+.+. +++| .++|+++++++...+. .|. ......
T Consensus 38 ~~irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a~~~a~~----------~g~----------~~~~~~ 97 (479)
T 2nvw_A 38 RPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQ----------LQL----------KHATGF 97 (479)
T ss_dssp CCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHH----------TTC----------TTCEEE
T ss_pred CcCEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHHHHHHHH----------cCC----------Ccceee
Confidence 3358999999 99999999999885 6775 4789999887654321 010 011234
Q ss_pred cCccC-c--CCCCEEEEcccCC
Q 004918 380 LDYSE-F--KDVDMVIEAVIES 398 (724)
Q Consensus 380 ~~~~~-~--~~aDlVIeav~e~ 398 (724)
+++++ + .++|+|++|+|..
T Consensus 98 ~d~~ell~~~~vD~V~I~tp~~ 119 (479)
T 2nvw_A 98 DSLESFAQYKDIDMIVVSVKVP 119 (479)
T ss_dssp SCHHHHHHCTTCSEEEECSCHH
T ss_pred CCHHHHhcCCCCCEEEEcCCcH
Confidence 55533 3 3799999999943
No 420
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=94.36 E-value=0.048 Score=56.07 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
+++|.|.|+ |.+|+.++..|++.|++|++.+|++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 36 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKT 36 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCS
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999997 9999999999999999999999986
No 421
>3gf3_A Glutaconyl-COA decarboxylase subunit A; sodium ION transport, biotin, glutamate fermentation, lyase; HET: COO; 1.75A {Clostridium symbiosum} PDB: 3gf7_A 3glm_A* 3gma_A*
Probab=94.35 E-value=0.8 Score=51.23 Aligned_cols=160 Identities=13% Similarity=0.032 Sum_probs=90.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEE
Q 004918 25 VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAA 104 (724)
Q Consensus 25 ~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaa 104 (724)
--++.+...+.+..+++.+... .+-+|.|.-.|+ +.+.+-..... ....+.+.. ... ..+.....|+|++
T Consensus 119 gGS~g~~~~~Ki~Ra~e~A~~~-~lPvI~l~dSgG-----Arl~~qe~~~~--~l~~~g~if-~~~-~~ls~~~iP~Isv 188 (588)
T 3gf3_A 119 AGAWVPGQAENLIRCSDAAKMM-HLPLIYLLNCSG-----VEFPNQDKVYP--NRRGGGTPF-FRN-SELNQLGIPVIVG 188 (588)
T ss_dssp GGCBCTTHHHHHHHHHHHHHHH-TCCEEEEECCCC-----BCGGGHHHHSS--STTSTTHHH-HHH-HHHHHTTCCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEcCCC-----cCccccccccc--chhhHHHHH-HHH-HHHhcCCCCEEEE
Confidence 3688888899999999888765 456777764443 33321111000 011112212 122 2355678999999
Q ss_pred ECccccchhHHHHhhcCEEEEeCCceeeCccccc--CccCCcchhhhhccc---ccHHHHHHHHHcCCCCCHHHHH--HC
Q 004918 105 VEGLALGGGLELAMGCHARIAAPKTQLGLPELTL--GVIPGFGGTQRLPRL---VGLSKAIEMMLLSKSITSEEGW--KL 177 (724)
Q Consensus 105 v~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~--G~~P~~g~~~~l~r~---~G~~~a~~l~ltg~~i~a~eA~--~~ 177 (724)
|-|.|.|||...++++|++++.+++.+++.-..+ |+-|.+ .. .+.- +.....-+-..+.+.+.+.+.+ ..
T Consensus 189 v~Gp~~gGgAy~a~~~~vim~~~~a~i~~aGP~vI~~~~p~g--~~-~~~~~~~~~~~~~ge~~vs~eeLGGa~~h~~~s 265 (588)
T 3gf3_A 189 IYGTNPAGGGYHSISPTILIAHQDANMAVGGAGILSGMNPKG--YI-DDEAAEQIIAAQIENSKLKVPAPGSVPIHYDET 265 (588)
T ss_dssp ECSEEETHHHHHHHSSSEEEEETTCEEESSCCC------------------CHHHHHHHHHHHHTTCCCTTBHHHHTTTS
T ss_pred EeCCCCchhhhHhhCCeEEEEECCcEEEecChhhhcccCccc--cc-cccchhhhhhhhccccccChhhccchhhhcccc
Confidence 9999999988778888888888888887643321 111100 00 1110 0011111111466777777777 59
Q ss_pred CCcceecCcch-HHHHHHHHH
Q 004918 178 GLIDAVVTSEE-LLKVSRLWA 197 (724)
Q Consensus 178 Glv~~vv~~~~-l~~~a~~~a 197 (724)
|++|.++++|+ ..+.++++.
T Consensus 266 Gv~d~~a~de~~al~~~r~~l 286 (588)
T 3gf3_A 266 GFFREVYQNDLGVIDGIKKYI 286 (588)
T ss_dssp CCSCEEESSHHHHHHHHHHHH
T ss_pred ccceEEeCCHHHHHHHHHHHH
Confidence 99999997664 344444443
No 422
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.35 E-value=0.2 Score=52.08 Aligned_cols=40 Identities=18% Similarity=0.104 Sum_probs=35.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
.++|.|.|+ |.+|+.++..|++.|++|++.+|+++..+..
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 468999988 9999999999999999999999998775543
No 423
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=94.30 E-value=0.024 Score=55.48 Aligned_cols=78 Identities=22% Similarity=0.214 Sum_probs=46.4
Q ss_pred ceEEEEcCCCCcHHHHHH--HHHCCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 309 RKVAVIGGGLMGSGIATA--HILNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~--la~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
.+|+|||+|.+|..++.. +...|++++ ++|.+++...... .| -.+...+++ +.
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g~~i------------~g-----------v~V~~~~dl~el 142 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIGTEV------------GG-----------VPVYNLDDLEQH 142 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTTCEE------------TT-----------EEEEEGGGHHHH
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHHhHh------------cC-----------CeeechhhHHHH
Confidence 479999999999999994 445578655 6799987533210 00 011223344 33
Q ss_pred cCCCCEEEEcccCChHHHHHHHHHHHh
Q 004918 385 FKDVDMVIEAVIESVPLKQKIFSELEK 411 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~~k~~v~~~l~~ 411 (724)
+++.|+||.|+| ....+++...+.+
T Consensus 143 i~~~D~ViIAvP--s~~~~ei~~~l~~ 167 (215)
T 2vt3_A 143 VKDESVAILTVP--AVAAQSITDRLVA 167 (215)
T ss_dssp CSSCCEEEECSC--HHHHHHHHHHHHH
T ss_pred HHhCCEEEEecC--chhHHHHHHHHHH
Confidence 444499999999 4445566666654
No 424
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.29 E-value=0.037 Score=55.72 Aligned_cols=44 Identities=18% Similarity=0.300 Sum_probs=37.8
Q ss_pred ceEEEE--cCCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Q 004918 309 RKVAVI--GGGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352 (724)
Q Consensus 309 ~kI~VI--G~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~ 352 (724)
.|+++| |++-+|.++|..|++.|.+|++.|++++.+++..+.++
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~ 54 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLT 54 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 478888 55889999999999999999999999998887765554
No 425
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=94.28 E-value=0.062 Score=55.69 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCc
Confidence 568999996 9999999999999999999999986
No 426
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.27 E-value=0.045 Score=48.41 Aligned_cols=81 Identities=9% Similarity=-0.017 Sum_probs=58.0
Q ss_pred cceEEEEcC----CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCcc
Q 004918 308 VRKVAVIGG----GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYS 383 (724)
Q Consensus 308 ~~kI~VIG~----G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~ 383 (724)
.++|+|||+ +..|..+...|.+.||+|+.++...+.+ ....+..+++
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i-----------------------------~G~~~y~sl~ 54 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEV-----------------------------LGKTIINERP 54 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEE-----------------------------TTEECBCSCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcC-----------------------------CCeeccCChH
Confidence 478999998 5679999999999999998888654321 1233345556
Q ss_pred CcCCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEE
Q 004918 384 EFKDVDMVIEAVIESVPLKQKIFSELEKACPPHCILA 420 (724)
Q Consensus 384 ~~~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~ 420 (724)
++.+.|+++.++| .+...++++++.+.-. ..++.
T Consensus 55 dlp~vDlavi~~p--~~~v~~~v~e~~~~g~-k~v~~ 88 (122)
T 3ff4_A 55 VIEGVDTVTLYIN--PQNQLSEYNYILSLKP-KRVIF 88 (122)
T ss_dssp CCTTCCEEEECSC--HHHHGGGHHHHHHHCC-SEEEE
T ss_pred HCCCCCEEEEEeC--HHHHHHHHHHHHhcCC-CEEEE
Confidence 6655999999999 7777788887666533 34443
No 427
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=94.27 E-value=0.16 Score=56.94 Aligned_cols=158 Identities=10% Similarity=0.110 Sum_probs=102.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEcCCCCccCCCCchhhhhccCCCcccccchhHHHHHHHHHhcCCCcEEEEE
Q 004918 26 NALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGAGDVSLMPDVSVELVVNLIEDCKKPIVAAV 105 (724)
Q Consensus 26 Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kp~Iaav 105 (724)
-.++++-.....++++.+++ .++-+|.|.-. +.|..|.+-++ ....+...+++ ..+..+..|+|+.|
T Consensus 385 G~l~~~~a~Kaarfi~~c~~-~~iPlv~lvDt-pGf~~G~~~E~----------~Gi~~~gA~~~-~a~a~a~vP~itvI 451 (587)
T 1pix_A 385 GKLYRQGLVKMNEFVTLCAR-DRLPIVWIQDT-TGIDVGNDAEK----------AELLGLGQSLI-YSIQTSHIPQFEIT 451 (587)
T ss_dssp TEECHHHHHHHHHHHHHHHH-TTCCEEEEECC-CEECCSHHHHH----------TTHHHHHHHHH-HHHHTCCCCEEEEE
T ss_pred CCcCHHHHHHHHHHHHHhhc-CCCCeEEEecC-CCCCCcHHHHH----------HHHHHHHHHHH-HHHHhCCCCEEEEE
Confidence 47999999999999987765 46677777543 34655554221 12334455666 67899999999999
Q ss_pred CccccchhHHHHhh-----c--CEEEEeCCceeeCcccccCccCCcchhhhhccc-ccH-----------HH-HHHHHH-
Q 004918 106 EGLALGGGLELAMG-----C--HARIAAPKTQLGLPELTLGVIPGFGGTQRLPRL-VGL-----------SK-AIEMML- 164 (724)
Q Consensus 106 ~G~a~GgG~~lala-----c--D~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~-~G~-----------~~-a~~l~l- 164 (724)
-|.+.||| .++++ + |+++|.++++++. +++-|.+..+-+. .-. .. ..++.-
T Consensus 452 ~g~~~Ggg-~~am~~~~~~~~~d~~~a~p~A~~~V-------m~pegaa~Il~r~~~~~~~~~g~~~~~~~~~~~~~~~~ 523 (587)
T 1pix_A 452 LRKGTAAA-HYVLGGPQGNDTNAFSIGTAATEIAV-------MNGETAATAMYSRRLAKDRKAGKDLQPTIDKMNNLIQA 523 (587)
T ss_dssp CSEEETTH-HHHTTCTTCTTTEEEEEECTTCEEES-------SCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH
T ss_pred cCCCccHH-HHHhcCcccCcccceeeeccCCeEec-------CCHHHHHHHHHhhhhhhhhhcCCChHHHHHHHHHHHHH
Confidence 99999887 45555 4 9988888887773 3333333322221 100 00 011110
Q ss_pred cCCCCCHHHHHHCCCcceecCcchHHHHHHHHHHHHHccC
Q 004918 165 LSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARR 204 (724)
Q Consensus 165 tg~~i~a~eA~~~Glv~~vv~~~~l~~~a~~~a~~la~~~ 204 (724)
--+..++..|.+.|+||.|+++.+.........+.+..++
T Consensus 524 y~~~~~p~~aa~~g~iD~VI~p~~tR~~l~~~L~~~~~~~ 563 (587)
T 1pix_A 524 FYTKSRPKVCAELGLVDEIVDMNKIRGYVEAFTEAAYQNP 563 (587)
T ss_dssp HHHTTSHHHHHHHTSSSEECCTTTHHHHHHHHHHHHTTSC
T ss_pred HHHhCCHHHHHhcCCCccccCHHHHHHHHHHHHHHHhcCC
Confidence 0124789999999999999999888777666666665544
No 428
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.18 E-value=0.039 Score=53.77 Aligned_cols=35 Identities=14% Similarity=0.269 Sum_probs=32.1
Q ss_pred eEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCCHHHH
Q 004918 310 KVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYL 344 (724)
Q Consensus 310 kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~ 344 (724)
||.|.| +|.+|..++..|++.|++|++.+|+++.+
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQV 37 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGS
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccch
Confidence 799998 59999999999999999999999998753
No 429
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=94.15 E-value=0.036 Score=56.91 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=31.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~ 342 (724)
+||.|.|+ |.+|+.++..|.+.||+|++..|+++
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 47999988 99999999999999999999999864
No 430
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=94.15 E-value=0.084 Score=52.04 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=36.9
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
+++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 46 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHEL 46 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356777776 78999999999999999999999999877765543
No 431
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.03 E-value=0.047 Score=56.61 Aligned_cols=34 Identities=15% Similarity=0.283 Sum_probs=31.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~ 342 (724)
++|.|+|+ |.+|+.++..|++.|++|++.+|+++
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999996 99999999999999999999999875
No 432
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.02 E-value=0.083 Score=56.31 Aligned_cols=67 Identities=15% Similarity=0.049 Sum_probs=46.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC--CCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc-cC
Q 004918 309 RKVAVIGGGLMGSGIATAHILN--NIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY-SE 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~--G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~-~~ 384 (724)
.||+|||+| +|.--+..+.+. +++++ ++|+++++.++..++ - .+...+|+ +.
T Consensus 8 ~rv~VvG~G-~g~~h~~a~~~~~~~~elvav~~~~~~~a~~~a~~----------~-------------gv~~~~~~~~l 63 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAFMQPPEGLELVGLLAQGSARSRELAHA----------F-------------GIPLYTSPEQI 63 (372)
T ss_dssp EEEEEECST-TTHHHHHTTSSCCTTEEEEEEECCSSHHHHHHHHH----------T-------------TCCEESSGGGC
T ss_pred CEEEEEehH-HHHHHHHHHHhCCCCeEEEEEECCCHHHHHHHHHH----------h-------------CCCEECCHHHH
Confidence 589999999 798777777654 56765 679999887664321 1 13345666 44
Q ss_pred cCCCCEEEEcccCCh
Q 004918 385 FKDVDMVIEAVIESV 399 (724)
Q Consensus 385 ~~~aDlVIeav~e~~ 399 (724)
+++.|+|+.++|...
T Consensus 64 ~~~~D~v~i~~p~~~ 78 (372)
T 4gmf_A 64 TGMPDIACIVVRSTV 78 (372)
T ss_dssp CSCCSEEEECCC--C
T ss_pred hcCCCEEEEECCCcc
Confidence 678999999998653
No 433
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=94.00 E-value=0.026 Score=55.87 Aligned_cols=32 Identities=28% Similarity=0.329 Sum_probs=30.3
Q ss_pred eEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 310 KVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
.|+|||+|.-|.+.|..|+++|++|+++|+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999864
No 434
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=94.00 E-value=0.1 Score=56.57 Aligned_cols=99 Identities=17% Similarity=0.174 Sum_probs=59.0
Q ss_pred cceEEEEcCCC---CcHHHHHHHHHCC-CcEE--EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccC
Q 004918 308 VRKVAVIGGGL---MGSGIATAHILNN-IYVV--LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLD 381 (724)
Q Consensus 308 ~~kI~VIG~G~---mG~~iA~~la~~G-~~V~--l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~ 381 (724)
.-||+|||+|. ||...+..+...+ ++|+ ++|++++++++..++. | + ......++
T Consensus 37 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~----------g-~---------~~~~~~~~ 96 (417)
T 3v5n_A 37 RIRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGREL----------G-L---------DPSRVYSD 96 (417)
T ss_dssp CEEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHH----------T-C---------CGGGBCSC
T ss_pred cceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHc----------C-C---------CcccccCC
Confidence 35899999999 9999888887765 6765 6799999876643311 1 0 00123445
Q ss_pred ccC-cC-------CCCEEEEcccCChHHHHHHHHHHHhhCCCC-cEEEecCCCCCHHHH
Q 004918 382 YSE-FK-------DVDMVIEAVIESVPLKQKIFSELEKACPPH-CILATNTSTIDLNIV 431 (724)
Q Consensus 382 ~~~-~~-------~aDlVIeav~e~~~~k~~v~~~l~~~~~~~-~ii~s~ts~~~~~~~ 431 (724)
+++ ++ +.|+|++|+|..... ++.... +..+ .+++-..-+....+.
T Consensus 97 ~~~ll~~~~~~~~~vD~V~I~tp~~~H~--~~~~~a---l~aGkhVl~EKPla~~~~ea 150 (417)
T 3v5n_A 97 FKEMAIREAKLKNGIEAVAIVTPNHVHY--AAAKEF---LKRGIHVICDKPLTSTLADA 150 (417)
T ss_dssp HHHHHHHHHHCTTCCSEEEECSCTTSHH--HHHHHH---HTTTCEEEEESSSCSSHHHH
T ss_pred HHHHHhcccccCCCCcEEEECCCcHHHH--HHHHHH---HhCCCeEEEECCCcCCHHHH
Confidence 532 33 489999999966543 333332 2233 355544445555443
No 435
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=93.98 E-value=0.11 Score=54.45 Aligned_cols=37 Identities=22% Similarity=0.400 Sum_probs=28.5
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEE-EEeCCHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYVV-LKEVNSEYLL 345 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V~-l~d~~~~~~~ 345 (724)
.||+|+|+|.||..+++.+.++ +++|+ +.|++++...
T Consensus 2 ikVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~ 40 (337)
T 1cf2_P 2 KAVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEA 40 (337)
T ss_dssp EEEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHH
T ss_pred eEEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHH
Confidence 5899999999999999999874 55654 4577755443
No 436
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=93.98 E-value=0.13 Score=57.06 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=32.4
Q ss_pred CCcceEEEEcCCCCcHH-HHHHHHHCCCcEEEEeCCHH
Q 004918 306 RGVRKVAVIGGGLMGSG-IATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~~-iA~~la~~G~~V~l~d~~~~ 342 (724)
..++||.|||.|..|.+ +|..|.+.|++|+++|.++.
T Consensus 20 ~~~~~v~viGiG~sG~s~~A~~l~~~G~~V~~~D~~~~ 57 (494)
T 4hv4_A 20 RRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPN 57 (494)
T ss_dssp --CCEEEEETTTSTTHHHHHHHHHHTTCEEEEECSSCC
T ss_pred ccCCEEEEEEEcHhhHHHHHHHHHhCCCeEEEEECCCC
Confidence 45789999999999996 99999999999999998754
No 437
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.98 E-value=0.13 Score=56.49 Aligned_cols=35 Identities=20% Similarity=0.121 Sum_probs=32.4
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHH
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 342 (724)
.+||.|||.|..|.+.|..|.+.|++|+++|.++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~ 43 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKPF 43 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSCG
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcc
Confidence 47999999999999999999999999999999653
No 438
>3k8x_A Acetyl-COA carboxylase; transferase, carboxyltransferase, AC tepraloxydim, ATP-binding, biotin, fatty acid biosynthesis; HET: B89; 2.30A {Saccharomyces cerevisiae} PDB: 1w2x_A* 3h0s_A* 3h0j_A* 3h0q_A* 1od2_A* 1od4_A* 3pgq_A* 3tvu_A* 3tv5_A* 3tvw_A* 3tz3_A* 1uyr_A* 1uys_A* 1uyt_A 1uyv_A
Probab=93.92 E-value=0.16 Score=57.94 Aligned_cols=81 Identities=11% Similarity=0.082 Sum_probs=55.3
Q ss_pred CCCcEEEEECccccchhHHHHhhcCEEEEeCCceeeCcccccCccCCcchhhhhcccccHHHHHHHHHcCCCC--CHHHH
Q 004918 97 CKKPIVAAVEGLALGGGLELAMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSI--TSEEG 174 (724)
Q Consensus 97 ~~kp~Iaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~P~~g~~~~l~r~~G~~~a~~l~ltg~~i--~a~eA 174 (724)
...|+|++|.|.|.|||..+...||++|+.+++.+.+. |+... +. .+|+.+ +.++.
T Consensus 245 ~~IPqIsvV~G~c~GGgAY~paL~D~vImv~~s~iflt--------------------GP~vI-k~-~tGeeV~~s~eeL 302 (758)
T 3k8x_A 245 HDIFTITLVTCRSVGIGAYLVRLGQRAIQVEGQPIILT--------------------GAPAI-NK-MLGREVYTSNLQL 302 (758)
T ss_dssp TTSCEEEEECSCEETHHHHHHHHTCEEEEETTCCEESS--------------------CHHHH-HH-HHTSCCCSCTHHH
T ss_pred cCCCEEEEEccCCchHHHHHHhhCCEEEEECCceEEEe--------------------CHHHH-HH-HhCCccccCchhc
Confidence 46899999999999999999999999999988643321 21111 11 256655 44432
Q ss_pred ------HHCCCcceecCcchHHHHHHHHHHHHHc
Q 004918 175 ------WKLGLIDAVVTSEELLKVSRLWALDIAA 202 (724)
Q Consensus 175 ------~~~Glv~~vv~~~~l~~~a~~~a~~la~ 202 (724)
...|++|.+++.|. .+.+.++++.+
T Consensus 303 GGA~vh~~sGvad~va~dd~---eal~~ir~lLs 333 (758)
T 3k8x_A 303 GGTQIMYNNGVSHLTAVDDL---AGVEKIVEWMS 333 (758)
T ss_dssp HSHHHHTTTTSSSEEESSHH---HHHHHHHHHHT
T ss_pred chhhHHHhcCCeeEEecCHH---HHHHHHHHHHh
Confidence 36899999997653 44445555544
No 439
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=93.91 E-value=0.043 Score=57.88 Aligned_cols=69 Identities=14% Similarity=0.064 Sum_probs=44.1
Q ss_pred ceEEEEcCCCCcHHHHHH-H-H-HCCCcEE-EEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccC
Q 004918 309 RKVAVIGGGLMGSGIATA-H-I-LNNIYVV-LKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSE 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~-l-a-~~G~~V~-l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~ 384 (724)
.||+|||+|.||..+... + . ..+++|+ ++|+++++.+... + ...+...+++++
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~~~~~-----------~------------~~~~~~~~~~~~ 59 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQAP-----------I------------YSHIHFTSDLDE 59 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGGGGSG-----------G------------GTTCEEESCTHH
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHHHHHH-----------h------------cCCCceECCHHH
Confidence 589999999999874333 3 3 2367776 8899987542110 0 112334566643
Q ss_pred -cC--CCCEEEEcccCChH
Q 004918 385 -FK--DVDMVIEAVIESVP 400 (724)
Q Consensus 385 -~~--~aDlVIeav~e~~~ 400 (724)
++ ++|+|+.|+|....
T Consensus 60 ll~~~~~D~V~i~tp~~~h 78 (345)
T 3f4l_A 60 VLNDPDVKLVVVCTHADSH 78 (345)
T ss_dssp HHTCTTEEEEEECSCGGGH
T ss_pred HhcCCCCCEEEEcCChHHH
Confidence 44 48999999995544
No 440
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=93.83 E-value=0.23 Score=50.45 Aligned_cols=41 Identities=24% Similarity=0.289 Sum_probs=34.8
Q ss_pred ceEEEE-c-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VI-G-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
.||++| | ++-+|.++|..|++.|.+|++.||+++.+++..+
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 378877 4 4779999999999999999999999998876543
No 441
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=93.80 E-value=0.091 Score=52.78 Aligned_cols=42 Identities=21% Similarity=0.143 Sum_probs=35.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 350 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASR 50 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45667766 8999999999999999999999999877665443
No 442
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.73 E-value=0.2 Score=50.12 Aligned_cols=39 Identities=13% Similarity=0.244 Sum_probs=31.8
Q ss_pred cceEEEE-c-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHH
Q 004918 308 VRKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLK 346 (724)
Q Consensus 308 ~~kI~VI-G-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~ 346 (724)
|.|++|| | ++-+|.++|..|++.|.+|++.|++++.+++
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~ 41 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD 41 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 3455555 5 5789999999999999999999999887654
No 443
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=93.70 E-value=0.057 Score=53.87 Aligned_cols=40 Identities=20% Similarity=0.204 Sum_probs=34.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGI 348 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~ 348 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 52 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAA 52 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 56777766 89999999999999999999999988766543
No 444
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.70 E-value=0.076 Score=54.53 Aligned_cols=34 Identities=24% Similarity=0.289 Sum_probs=31.6
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
+++|.|+|+ |.+|+.++..|++.|++|++.+|+.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 578999997 9999999999999999999999984
No 445
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.67 E-value=0.11 Score=54.45 Aligned_cols=36 Identities=19% Similarity=0.224 Sum_probs=31.4
Q ss_pred CCcceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 306 RGVRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 306 ~~~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
|..++|.|.|+ |.+|+.++..|++.|++|++.+|++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 33468999998 9999999999999999999999976
No 446
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=93.63 E-value=0.021 Score=60.45 Aligned_cols=32 Identities=28% Similarity=0.215 Sum_probs=30.6
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCC
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVN 340 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~ 340 (724)
.||.|+|+|.+|.++|..+...|. +|+++|++
T Consensus 193 ~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 193 VKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 589999999999999999999998 89999998
No 447
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.61 E-value=0.083 Score=53.16 Aligned_cols=43 Identities=16% Similarity=0.263 Sum_probs=35.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSL 51 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 45667766 89999999999999999999999998776654433
No 448
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=93.55 E-value=0.09 Score=53.65 Aligned_cols=42 Identities=29% Similarity=0.286 Sum_probs=34.4
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 310 kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
+|.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.+
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 77 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEI 77 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 3445555 88999999999999999999999998877765443
No 449
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=93.53 E-value=0.11 Score=51.89 Aligned_cols=44 Identities=25% Similarity=0.198 Sum_probs=36.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~ 352 (724)
++|.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.+.
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 57 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN 57 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 45666666 889999999999999999999999998877655443
No 450
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=93.49 E-value=0.093 Score=53.28 Aligned_cols=41 Identities=17% Similarity=0.097 Sum_probs=33.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~ 63 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAG 63 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 44555565 899999999999999999999999987766543
No 451
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=93.49 E-value=0.078 Score=55.65 Aligned_cols=35 Identities=20% Similarity=0.197 Sum_probs=31.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~ 342 (724)
.++|.|.|+ |.+|+.++..|++.|++|++++|++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 468999996 99999999999999999999999654
No 452
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=93.48 E-value=0.14 Score=55.21 Aligned_cols=96 Identities=16% Similarity=0.163 Sum_probs=58.8
Q ss_pred eEEEEcCCCCcHHHHHHHHHC---------CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccc
Q 004918 310 KVAVIGGGLMGSGIATAHILN---------NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV 379 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~---------G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 379 (724)
||||||+|.||...+..+.+. +.+| .++|++++++++..++. +.....
T Consensus 28 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~----------------------~~~~~y 85 (412)
T 4gqa_A 28 NIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKL----------------------GAEKAY 85 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHH----------------------TCSEEE
T ss_pred eEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHc----------------------CCCeEE
Confidence 799999999999888888764 3354 46899999877654321 111234
Q ss_pred cCccC-c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHHH
Q 004918 380 LDYSE-F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNIV 431 (724)
Q Consensus 380 ~~~~~-~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~~ 431 (724)
+|+++ + .+.|+|+.|+|..... ++.....+. ..-+++--.-+....+.
T Consensus 86 ~d~~~ll~~~~vD~V~I~tp~~~H~--~~~~~al~a--GkhVl~EKP~a~~~~ea 136 (412)
T 4gqa_A 86 GDWRELVNDPQVDVVDITSPNHLHY--TMAMAAIAA--GKHVYCEKPLAVNEQQA 136 (412)
T ss_dssp SSHHHHHHCTTCCEEEECSCGGGHH--HHHHHHHHT--TCEEEEESCSCSSHHHH
T ss_pred CCHHHHhcCCCCCEEEECCCcHHHH--HHHHHHHHc--CCCeEeecCCcCCHHHH
Confidence 55533 3 4689999999955443 333332221 23355544445555443
No 453
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=93.46 E-value=0.043 Score=58.60 Aligned_cols=95 Identities=16% Similarity=0.101 Sum_probs=57.0
Q ss_pred eEEEEcCCCCcHHHHHHHHHCC--------Cc-EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 310 KVAVIGGGLMGSGIATAHILNN--------IY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~~G--------~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
||||||+|.||..-+..+.... .+ |.++|++++++++..++. +.-...+
T Consensus 8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~----------------------g~~~~~~ 65 (390)
T 4h3v_A 8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKL----------------------GWSTTET 65 (390)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHH----------------------TCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHc----------------------CCCcccC
Confidence 7899999999998877776532 24 457899999877653321 1112345
Q ss_pred CccC-c--CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCCHHH
Q 004918 381 DYSE-F--KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTIDLNI 430 (724)
Q Consensus 381 ~~~~-~--~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~~~~ 430 (724)
|+++ + .+.|+|+.|+|..... ++.....+. ..-+++--.-+..+.+
T Consensus 66 d~~~ll~~~~iDaV~I~tP~~~H~--~~~~~al~a--GkhVl~EKPla~t~~e 114 (390)
T 4h3v_A 66 DWRTLLERDDVQLVDVCTPGDSHA--EIAIAALEA--GKHVLCEKPLANTVAE 114 (390)
T ss_dssp CHHHHTTCTTCSEEEECSCGGGHH--HHHHHHHHT--TCEEEEESSSCSSHHH
T ss_pred CHHHHhcCCCCCEEEEeCChHHHH--HHHHHHHHc--CCCceeecCcccchhH
Confidence 6533 3 4689999999955543 333332221 2335554444445544
No 454
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=93.46 E-value=0.044 Score=54.00 Aligned_cols=39 Identities=18% Similarity=0.077 Sum_probs=33.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|.|.|+ |.+|..++..|++.|++|++.+|+++.++..
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~ 45 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL 45 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 45666665 8999999999999999999999998876654
No 455
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=93.42 E-value=0.098 Score=55.33 Aligned_cols=33 Identities=21% Similarity=0.409 Sum_probs=30.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCC-cEEEEeCCH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNI-YVVLKEVNS 341 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~-~V~l~d~~~ 341 (724)
.+|.|||+|..|+.+|..|+.+|. +++++|.+.
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 479999999999999999999998 799999763
No 456
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=93.41 E-value=0.034 Score=59.54 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=31.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 342 (724)
.||.|||+|.-|..+|..|+++|++|+++|++++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~ 35 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSA 35 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 3799999999999999999999999999998653
No 457
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=93.37 E-value=0.11 Score=51.81 Aligned_cols=40 Identities=23% Similarity=0.151 Sum_probs=33.0
Q ss_pred eEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 310 KVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 310 kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
+|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD 42 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3555555 899999999999999999999999987765443
No 458
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=93.36 E-value=0.075 Score=53.26 Aligned_cols=41 Identities=17% Similarity=0.175 Sum_probs=34.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 44 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVAS 44 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34666665 899999999999999999999999987766543
No 459
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=93.31 E-value=0.13 Score=53.39 Aligned_cols=35 Identities=20% Similarity=0.344 Sum_probs=28.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHH--CCCc-EEEEeCCHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHIL--NNIY-VVLKEVNSEY 343 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~--~G~~-V~l~d~~~~~ 343 (724)
-||+|||+|.||..++..+.+ .+.+ |.++|+++++
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~ 42 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAAS 42 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTC
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhh
Confidence 589999999999999999865 3555 4567999775
No 460
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=93.25 E-value=0.071 Score=53.76 Aligned_cols=42 Identities=24% Similarity=0.249 Sum_probs=34.2
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 004918 309 RKVAVIG-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 350 (724)
++|.|.| .|.+|.++|..|++.|++|++.+|+++.++...+.
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 53 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVAD 53 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 3444555 48899999999999999999999999987765543
No 461
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=93.24 E-value=0.11 Score=53.60 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
+++|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 38 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 38 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence 468999996 9999999999999999999999983
No 462
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=93.20 E-value=0.41 Score=48.01 Aligned_cols=43 Identities=30% Similarity=0.444 Sum_probs=36.0
Q ss_pred ceEEEE-c-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VI-G-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
.|+++| | ++-+|.++|..|++.|..|+++|++++.+++..+.+
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i 51 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQEL 51 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHH
Confidence 367766 4 478999999999999999999999999888766544
No 463
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=93.17 E-value=0.12 Score=53.75 Aligned_cols=43 Identities=21% Similarity=0.382 Sum_probs=36.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l 52 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATL 52 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 46777776 89999999999999999999999999887765544
No 464
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.14 E-value=0.077 Score=52.87 Aligned_cols=39 Identities=13% Similarity=0.156 Sum_probs=33.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 45 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA 45 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45777776 8999999999999999999999998876653
No 465
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=93.13 E-value=0.056 Score=54.92 Aligned_cols=42 Identities=10% Similarity=0.306 Sum_probs=34.7
Q ss_pred eEEEE-cC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 310 KVAVI-GG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 310 kI~VI-G~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
|+++| |+ |.+|..+|..|++.|++|++.+++++.+++..+.+
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 70 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEF 70 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45555 54 88999999999999999999999999887765544
No 466
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=93.09 E-value=0.068 Score=53.75 Aligned_cols=41 Identities=15% Similarity=0.242 Sum_probs=34.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAA 50 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45667765 899999999999999999999999988776543
No 467
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=93.09 E-value=0.14 Score=53.72 Aligned_cols=86 Identities=15% Similarity=0.189 Sum_probs=48.3
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHh-hcCcccccCcc-C
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNA-LKMLKGVLDYS-E 384 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~-~~~i~~~~~~~-~ 384 (724)
-||+|+|+|.||..++..+.+. +.+| .+.|++++.+....+.. ...-.+.+. ...... ...+....+++ .
T Consensus 3 irVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~~~~~~~~~-----g~~~~~~~~-~~v~~~~~~~~~v~~d~~~l 76 (334)
T 2czc_A 3 VKVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKEL-----GIPVYAASE-EFIPRFEKEGFEVAGTLNDL 76 (334)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHT-----TCCEEESSG-GGHHHHHHHTCCCSCBHHHH
T ss_pred cEEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHHHHHHHHhc-----Ccccccccc-ccceeccCCceEEcCcHHHh
Confidence 5899999999999999999875 4455 45688776655432210 000000000 000000 01123334443 3
Q ss_pred cCCCCEEEEcccCChH
Q 004918 385 FKDVDMVIEAVIESVP 400 (724)
Q Consensus 385 ~~~aDlVIeav~e~~~ 400 (724)
+.++|+|++|.|....
T Consensus 77 ~~~vDvV~~aTp~~~h 92 (334)
T 2czc_A 77 LEKVDIIVDATPGGIG 92 (334)
T ss_dssp HTTCSEEEECCSTTHH
T ss_pred ccCCCEEEECCCcccc
Confidence 4689999999996553
No 468
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.08 E-value=0.037 Score=61.35 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=31.8
Q ss_pred cceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHH
Q 004918 308 VRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSE 342 (724)
Q Consensus 308 ~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~ 342 (724)
|++|.|||+|.-|.+-|..|+++|++|++++.+..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~ 35 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDK 35 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC--
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCC
Confidence 68999999999999999999999999999998764
No 469
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=93.07 E-value=0.11 Score=52.66 Aligned_cols=41 Identities=20% Similarity=0.096 Sum_probs=35.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~ 73 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAA 73 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHH
Confidence 56778876 899999999999999999999999987665443
No 470
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=93.03 E-value=0.13 Score=52.06 Aligned_cols=43 Identities=28% Similarity=0.275 Sum_probs=35.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 65 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 65 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45666665 89999999999999999999999998776654433
No 471
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=93.01 E-value=0.19 Score=52.16 Aligned_cols=36 Identities=11% Similarity=0.032 Sum_probs=30.4
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcE-EEEeCCHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYV-VLKEVNSEY 343 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V-~l~d~~~~~ 343 (724)
|.||+|||+ |.||...+..+...+.+| .++|++++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (312)
T 3o9z_A 3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNV 40 (312)
T ss_dssp CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 569999999 789999999999888764 567988775
No 472
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=92.97 E-value=0.1 Score=52.24 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=34.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 55 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVE 55 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 56777766 899999999999999999999999887665443
No 473
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=92.96 E-value=0.094 Score=53.18 Aligned_cols=42 Identities=17% Similarity=0.085 Sum_probs=34.6
Q ss_pred eEEEE-c-CCCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 310 KVAVI-G-GGLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 310 kI~VI-G-~G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
|+++| | +|.+|..+|..|++.|++|++.+++++.++...+.+
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 72 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAF 72 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 55555 5 488999999999999999999999998877665443
No 474
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=92.96 E-value=0.14 Score=54.25 Aligned_cols=105 Identities=18% Similarity=0.145 Sum_probs=57.3
Q ss_pred ceEEEEc-CCCCcHHHHHHHHHCC-CcEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccc-cCccCc
Q 004918 309 RKVAVIG-GGLMGSGIATAHILNN-IYVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGV-LDYSEF 385 (724)
Q Consensus 309 ~kI~VIG-~G~mG~~iA~~la~~G-~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~-~~~~~~ 385 (724)
.||+|+| .|.+|..++..|.++. ++|+.+.+++....+.. ........ ...+.... ..+... .+.+.+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~---~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~ 79 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKY---KDACYWFQ-DRDIPENI-----KDMVVIPTDPKHE 79 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBH---HHHSCCCC-SSCCCHHH-----HTCBCEESCTTSG
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccH---HHhccccc-ccccccCc-----eeeEEEeCCHHHH
Confidence 6899999 7999999999998764 57776643322111100 00000000 00011100 111111 233444
Q ss_pred -C-CCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC
Q 004918 386 -K-DVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (724)
Q Consensus 386 -~-~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (724)
+ ++|+||+|+| .....++...+. ..++.|+++++...
T Consensus 80 ~~~~~DvV~~atp--~~~~~~~a~~~~---~aG~~VId~s~~~R 118 (354)
T 1ys4_A 80 EFEDVDIVFSALP--SDLAKKFEPEFA---KEGKLIFSNASAYR 118 (354)
T ss_dssp GGTTCCEEEECCC--HHHHHHHHHHHH---HTTCEEEECCSTTT
T ss_pred hcCCCCEEEECCC--chHHHHHHHHHH---HCCCEEEECCchhc
Confidence 6 8999999998 555555555543 35677888877653
No 475
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=92.94 E-value=0.13 Score=53.83 Aligned_cols=64 Identities=17% Similarity=0.151 Sum_probs=43.4
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCC---------CcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccc
Q 004918 309 RKVAVIGGGLMGSGIATAHILNN---------IYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKG 378 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G---------~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~ 378 (724)
-||+|||+|.||+.++..+.+.. .+| .++|+++++.+ + +. ....
T Consensus 4 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~----------------~-~~---------~~~~ 57 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVLERAEELSAFGVVPRFLGVLVRDPRKPR----------------A-IP---------QELL 57 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTGGGGGGGTEEEEEEEEECSCTTSCC----------------S-SC---------GGGE
T ss_pred eEEEEEcCCHHHHHHHHHHHhChhhHhhcCCCEEEEEEEECCHHHhh----------------c-cC---------cccc
Confidence 48999999999999999988763 444 55688754311 1 11 1123
Q ss_pred ccCccCcCCCCEEEEcccCC
Q 004918 379 VLDYSEFKDVDMVIEAVIES 398 (724)
Q Consensus 379 ~~~~~~~~~aDlVIeav~e~ 398 (724)
++|++++-+.|+|++|+|..
T Consensus 58 ~~d~~~ll~iDvVve~t~~~ 77 (332)
T 2ejw_A 58 RAEPFDLLEADLVVEAMGGV 77 (332)
T ss_dssp ESSCCCCTTCSEEEECCCCS
T ss_pred cCCHHHHhCCCEEEECCCCc
Confidence 55664433999999999855
No 476
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=92.93 E-value=0.094 Score=53.26 Aligned_cols=41 Identities=22% Similarity=0.196 Sum_probs=34.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 74 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAA 74 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHH
Confidence 45777766 899999999999999999999999987765443
No 477
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=92.93 E-value=0.13 Score=50.84 Aligned_cols=41 Identities=17% Similarity=0.126 Sum_probs=34.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..++..|++.|++|++.+|+++.++...+
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAE 49 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence 45666665 899999999999999999999999887765543
No 478
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=92.92 E-value=0.088 Score=55.24 Aligned_cols=36 Identities=17% Similarity=0.012 Sum_probs=33.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHHHH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~~~ 345 (724)
++|.|+|.|..|..++..|.+.|+ |+++|++++.++
T Consensus 116 ~~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~~~~~ 151 (336)
T 1lnq_A 116 RHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKK 151 (336)
T ss_dssp CEEEEESCCHHHHHHHTTGGGSCE-EEEESCGGGHHH
T ss_pred CCEEEECCcHHHHHHHHHHHhCCc-EEEEeCChhhhh
Confidence 579999999999999999999999 999999999876
No 479
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=92.91 E-value=0.19 Score=52.19 Aligned_cols=36 Identities=19% Similarity=0.246 Sum_probs=30.2
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCc-EEEEeCCHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIY-VVLKEVNSEY 343 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~-V~l~d~~~~~ 343 (724)
|.||+|||+ |.||...+..+.+.|.+ |.++|++++.
T Consensus 3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~ 40 (318)
T 3oa2_A 3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSV 40 (318)
T ss_dssp CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCC
T ss_pred ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHH
Confidence 569999999 78999999999988876 4567888764
No 480
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=92.91 E-value=0.073 Score=53.59 Aligned_cols=39 Identities=23% Similarity=0.193 Sum_probs=33.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 47 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAM 47 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45777775 8999999999999999999999998876654
No 481
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.91 E-value=0.064 Score=56.69 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.8
Q ss_pred ceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCH
Q 004918 309 RKVAVIGGGLMGSGIATAHILNNIYVVLKEVNS 341 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~ 341 (724)
..|.|||+|.+|.++|..|++.|++|+++|+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 579999999999999999999999999999753
No 482
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=92.87 E-value=0.1 Score=52.06 Aligned_cols=41 Identities=17% Similarity=0.095 Sum_probs=34.5
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
+++.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 49 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGD 49 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 45667765 899999999999999999999999987766543
No 483
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=92.87 E-value=0.11 Score=52.54 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=34.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 350 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 56 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAA 56 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45666665 8999999999999999999999999877665443
No 484
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=92.83 E-value=0.082 Score=52.79 Aligned_cols=41 Identities=15% Similarity=0.019 Sum_probs=33.3
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
+++.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISD 51 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 34445555 889999999999999999999999988766543
No 485
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=92.82 E-value=0.095 Score=52.43 Aligned_cols=43 Identities=23% Similarity=0.174 Sum_probs=35.8
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
+++.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 51 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEI 51 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 34556665 89999999999999999999999999887765544
No 486
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.80 E-value=0.12 Score=57.77 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=32.7
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~ 343 (724)
++||.|.|+ |.+|+.++..|++.|++|++++|++..
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~ 183 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPK 183 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 468999995 999999999999999999999998764
No 487
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=92.73 E-value=0.066 Score=54.00 Aligned_cols=37 Identities=11% Similarity=0.094 Sum_probs=31.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLL 345 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~ 345 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.+.
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~ 65 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV 65 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH
Confidence 44556665 88999999999999999999999987653
No 488
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=92.63 E-value=0.12 Score=52.41 Aligned_cols=42 Identities=21% Similarity=0.133 Sum_probs=34.6
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 350 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 65 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKE 65 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 45666665 8999999999999999999999999877665443
No 489
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=92.62 E-value=0.059 Score=54.87 Aligned_cols=37 Identities=16% Similarity=0.145 Sum_probs=33.7
Q ss_pred CcceEEEEcCCCCcHHHHHHHHHCCCcEEEEeCCHHH
Q 004918 307 GVRKVAVIGGGLMGSGIATAHILNNIYVVLKEVNSEY 343 (724)
Q Consensus 307 ~~~kI~VIG~G~mG~~iA~~la~~G~~V~l~d~~~~~ 343 (724)
+++||.|.|+|.+|+.++..|++.|++|++.+|+++.
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQP 38 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3568999999999999999999999999999998764
No 490
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=92.61 E-value=0.26 Score=50.67 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=31.8
Q ss_pred cceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHH
Q 004918 308 VRKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEY 343 (724)
Q Consensus 308 ~~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~ 343 (724)
+++|.|.|+ |.+|+.++..|++.|++|++.+|++..
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 38 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN 38 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc
Confidence 368999995 999999999999999999999998543
No 491
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=92.61 E-value=0.078 Score=53.74 Aligned_cols=39 Identities=26% Similarity=0.274 Sum_probs=33.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKG 347 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 347 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++..
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~ 49 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL 49 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 45667765 8999999999999999999999998876553
No 492
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=92.61 E-value=0.15 Score=51.43 Aligned_cols=44 Identities=16% Similarity=0.146 Sum_probs=36.2
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTIE 352 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~ 352 (724)
+++.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 53 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALR 53 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 45566665 889999999999999999999999998877655443
No 493
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=92.60 E-value=0.14 Score=53.99 Aligned_cols=98 Identities=12% Similarity=0.115 Sum_probs=55.4
Q ss_pred cceEEEEc-CCCCcHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCccCc
Q 004918 308 VRKVAVIG-GGLMGSGIATAHILNNI-YVVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDYSEF 385 (724)
Q Consensus 308 ~~kI~VIG-~G~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~ 385 (724)
+.||+|+| .|.+|..+.+.|.++.. +++.+..+.+.-.+ + ... .+.+. . ...+... +.+++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~----~----~~~--~~~~~-----g-~~~~~~~-~~~~~ 66 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEP----V----HFV--HPNLR-----G-RTNLKFV-PPEKL 66 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSB----G----GGT--CGGGT-----T-TCCCBCB-CGGGC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCch----h----HHh--Cchhc-----C-ccccccc-chhHh
Confidence 46899999 59999999999987654 76665543221100 0 000 00000 0 0011111 12235
Q ss_pred CCCCEEEEcccCChHHHHHHHHHHHhhCCCCcEEEecCCCCC
Q 004918 386 KDVDMVIEAVIESVPLKQKIFSELEKACPPHCILATNTSTID 427 (724)
Q Consensus 386 ~~aDlVIeav~e~~~~k~~v~~~l~~~~~~~~ii~s~ts~~~ 427 (724)
.++|+||+|+|.. ...++...+ +..++.++++++...
T Consensus 67 ~~vDvV~~a~g~~--~s~~~a~~~---~~aG~~VId~Sa~~r 103 (345)
T 2ozp_A 67 EPADILVLALPHG--VFAREFDRY---SALAPVLVDLSADFR 103 (345)
T ss_dssp CCCSEEEECCCTT--HHHHTHHHH---HTTCSEEEECSSTTS
T ss_pred cCCCEEEEcCCcH--HHHHHHHHH---HHCCCEEEEcCcccc
Confidence 7899999999944 334444443 345777888877654
No 494
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=92.59 E-value=0.094 Score=53.40 Aligned_cols=43 Identities=23% Similarity=0.404 Sum_probs=35.7
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
++|.|.|+ |.+|.++|..|++.|++|++.+|+++.++...+.+
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 55 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL 55 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 45666665 89999999999999999999999999877765443
No 495
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=92.54 E-value=0.16 Score=53.19 Aligned_cols=29 Identities=21% Similarity=0.307 Sum_probs=24.2
Q ss_pred ceEEEEcCCCCcHHHHHHHHHC-CCcEEEE
Q 004918 309 RKVAVIGGGLMGSGIATAHILN-NIYVVLK 337 (724)
Q Consensus 309 ~kI~VIG~G~mG~~iA~~la~~-G~~V~l~ 337 (724)
.||+|+|+|.+|..+++.+.+. +.+|+.+
T Consensus 4 ikVgI~G~GrIGr~l~R~l~~~p~vevvaI 33 (337)
T 3e5r_O 4 IKIGINGFGRIGRLVARVALQSEDVELVAV 33 (337)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCSSEEEEEE
T ss_pred eEEEEECcCHHHHHHHHHHhCCCCeEEEEE
Confidence 4899999999999999998876 5566554
No 496
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=92.48 E-value=0.21 Score=51.08 Aligned_cols=43 Identities=19% Similarity=0.222 Sum_probs=36.0
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKTI 351 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i 351 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.+
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l 70 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQI 70 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 56777776 89999999999999999999999998877654433
No 497
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=92.48 E-value=0.16 Score=51.03 Aligned_cols=42 Identities=21% Similarity=0.132 Sum_probs=35.1
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIKT 350 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 350 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+|+++.++...+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQ 52 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 56777765 8999999999999999999999999877665443
No 498
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=92.48 E-value=0.1 Score=55.72 Aligned_cols=70 Identities=23% Similarity=0.227 Sum_probs=43.8
Q ss_pred eEEEEcCCCCcHHHHHHHHH--------CCCc-EEEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCccccc
Q 004918 310 KVAVIGGGLMGSGIATAHIL--------NNIY-VVLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVL 380 (724)
Q Consensus 310 kI~VIG~G~mG~~iA~~la~--------~G~~-V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~ 380 (724)
||||||+|.||..-+..+.. .+.+ |.++|++++++++..++. +.-...+
T Consensus 27 rvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~----------------------g~~~~y~ 84 (393)
T 4fb5_A 27 GIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEF----------------------GFEKATA 84 (393)
T ss_dssp EEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHH----------------------TCSEEES
T ss_pred cEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHh----------------------CCCeecC
Confidence 79999999999876655432 1445 457899998877643321 1112345
Q ss_pred CccC-c--CCCCEEEEcccCChHH
Q 004918 381 DYSE-F--KDVDMVIEAVIESVPL 401 (724)
Q Consensus 381 ~~~~-~--~~aDlVIeav~e~~~~ 401 (724)
|+++ + .+.|+|+.|+|.....
T Consensus 85 d~~ell~~~~iDaV~IatP~~~H~ 108 (393)
T 4fb5_A 85 DWRALIADPEVDVVSVTTPNQFHA 108 (393)
T ss_dssp CHHHHHHCTTCCEEEECSCGGGHH
T ss_pred CHHHHhcCCCCcEEEECCChHHHH
Confidence 6643 3 4689999999955543
No 499
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=92.48 E-value=0.2 Score=52.45 Aligned_cols=72 Identities=10% Similarity=0.048 Sum_probs=47.1
Q ss_pred CCcceEEEEcCCCCcH-HHHHHHHHC-CCcE-EEEeCCHHHHHHHHHHHHHHHHhhHhcCCCCHHHHHHhhcCcccccCc
Q 004918 306 RGVRKVAVIGGGLMGS-GIATAHILN-NIYV-VLKEVNSEYLLKGIKTIEANVRGLVTRGKLTQDKANNALKMLKGVLDY 382 (724)
Q Consensus 306 ~~~~kI~VIG~G~mG~-~iA~~la~~-G~~V-~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~ 382 (724)
|+.-||+|||+|.||. ..+..+.+. +.+| .++|++++. ..+...+++
T Consensus 23 M~~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------------------------------~g~~~~~~~ 72 (330)
T 4ew6_A 23 MSPINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------------------------------EGVNSYTTI 72 (330)
T ss_dssp CCCEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------------------------------TTSEEESSH
T ss_pred CCCceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------------------------------cCCCccCCH
Confidence 3445899999999998 688888775 6665 467888542 012234555
Q ss_pred cC-c---CCCCEEEEcccCChHHHHHHHHHH
Q 004918 383 SE-F---KDVDMVIEAVIESVPLKQKIFSEL 409 (724)
Q Consensus 383 ~~-~---~~aDlVIeav~e~~~~k~~v~~~l 409 (724)
++ + .+.|+|++|+| ...-.++....
T Consensus 73 ~~ll~~~~~vD~V~i~tp--~~~H~~~~~~a 101 (330)
T 4ew6_A 73 EAMLDAEPSIDAVSLCMP--PQYRYEAAYKA 101 (330)
T ss_dssp HHHHHHCTTCCEEEECSC--HHHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEeCC--cHHHHHHHHHH
Confidence 33 2 46899999999 44434444443
No 500
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=92.47 E-value=0.13 Score=51.03 Aligned_cols=41 Identities=20% Similarity=0.043 Sum_probs=34.4
Q ss_pred ceEEEEcC-CCCcHHHHHHHHHCCCcEEEEeCCHHHHHHHHH
Q 004918 309 RKVAVIGG-GLMGSGIATAHILNNIYVVLKEVNSEYLLKGIK 349 (724)
Q Consensus 309 ~kI~VIG~-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 349 (724)
++|.|.|+ |.+|..+|..|++.|++|++.+++++.++...+
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~ 47 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFEN 47 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45566665 889999999999999999999999988776544
Done!